LOCUS       DASFQD010000001        60932 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.001, whole genome shotgun sequence.
ACCESSION   DASFQD010000001 DASFQD010000000
VERSION     DASFQD010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 60932)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 60932)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..60932
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.001"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            94..1323
                     /locus_tag="U1021_000001"
     CDS             94..1323
                     /locus_tag="U1021_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase"
                     /protein_id="HEM4710604.1"
                     /translation="MRKVSRSILTILLSATVLSACSGGGKNLSERLEAAKVEFSKEKK
                     QLEAELTALKEEVQGNFYYQQLDTDKERHVYLQFVNGLSKRMQVIDIDSVNDEIYSRV
                     YFSVAHDYPEFYWLTDEAAMAGGIDILDLEEPVYPSDLSPTQNKIEDEVNKILAQTPK
                     GSDYEKVKYFYEVIIRQTDYDLEALQTKSVTWRSQGITSVLLDKKSVCAGYSRTFQYL
                     CKKAGIDCIYVTGIAKNGQNGEFGHAWNLVKINGQHYGVDTTWGDPVFDQAISGEAHT
                     DISYDYLCVPDEILERSRIADSDLLDYWGEEQYYEPRVLVYPKCTDNSLNYYVQKGVY
                     FTSFDEAAVLQSITDQRLQGTNKVVLQFGTAEAMQQMITLASTENNAIFQALGDVGEY
                     QYYYNDQTYTFELADWF"
     gene            complement(1585..1833)
                     /locus_tag="U1021_000002"
     CDS             complement(1585..1833)
                     /locus_tag="U1021_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018368578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEM4710605.1"
                     /translation="MEVKPLANIKSAIKRAELNVKQNEKNSAQKSAMRTAIKAFEANP
                     SEELFRAASSAIDKAETKGLIHKNKASRDKARLASKLA"
     gene            complement(1892..2812)
                     /locus_tag="U1021_000003"
     CDS             complement(1892..2812)
                     /locus_tag="U1021_000003"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009568566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HEM4710606.1"
                     /translation="MKNEFLNFEQIDRATWQQLHRKTTIPLSQSELNSIKSFNDRIQL
                     HEVSDIYLPLVNLIHIYRKARKDLNFTKSLFLQKTIKPQPFIIGVSGSVAVGKSTTSR
                     LLQILIARTFKHAKVELVTTDGFLHPNAVLEERQLLNKKGFPESYDMEKLIDFLDKIK
                     NGYDCQIPVYSHEIYDIVPNKTQDIKSPDFLIVEGINVFQNPQNQRLYVSDYFDLSIY
                     VDADVEHIETWYLERFQKLLTLAKNDPNNYYHRFTQMTYPEILSIAQNTWKNINLANL
                     EKFIEPTRNRADIILHKAENHEIDKIYLKK"
     gene            2921..3511
                     /locus_tag="U1021_000004"
     CDS             2921..3511
                     /locus_tag="U1021_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM4710607.1"
                     /translation="MSNMYYEKNPTVAHDIHEIHVNLLDTPMSFITDAGVFSKKMVDY
                     GSQVLLKTLHFEKGASVLDVGCGYGPIGLTLAKVFSTKTTLIDINSRALDLATKNAER
                     NGVTAKIYQSNIYENVDETFNHIVSNPPIRAGKSVVHEVIAGAFQRLEANGTLTIVIQ
                     KKQGAPSAKAKMEEVFGNCQIIKKDKGYYILESVRE"
     gene            3508..4785
                     /locus_tag="U1021_000005"
     CDS             3508..4785
                     /locus_tag="U1021_000005"
                     /EC_number="2.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018543466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-nucleoside phosphorylase"
                     /protein_id="HEM4710608.1"
                     /translation="MRAVDLIQKKRDGLELSSEEIKWLIDGYVAGTVPDYQMSALAMA
                     IYFKGMSTREISDLTMSMVATGEQIDLSAIPGIKVDKHSTGGVGDKVTLILAPLVASF
                     DIPVAKMSGRGLGHTGGTLDKLESIKGYQIEVSQEDFIKQVQDTGVAVIGQSDNLVKA
                     DKLLYALRDVTATVDIIPLIASSVMSKKIAAGADAILLDVTVGEGAFMKTVEEARVLA
                     QTMVDLGKAVGRKTVAVLTDMSQPVGTSIGNRLEILEAIEILQGKGREDVTEFICELA
                     QIMLGLANVEKSIEEVRQYIDNGAALKKFEEMVLAQGGDLEDLYRPVQVTQQVPVLAE
                     EDGYLVGLPALEFGLFAMKLGAGRAVKTDDLDYETGIVFHKKVGEAVSKGEQIATIYA
                     NENISENMLTNFRKNVKIDKESVKTKEIIEIIS"
     gene            4801..5463
                     /gene="deoC"
                     /locus_tag="U1021_000006"
     CDS             4801..5463
                     /gene="deoC"
                     /locus_tag="U1021_000006"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HEM4710609.1"
                     /translation="MKLNKYIDHTILKPETTQEQVEKILAEAKEYDFASVCVNPTWVA
                     LAAESLKDSDVKVCTVIGFPLGANTPAVKAFETKDAISNGADEIDMVINIGALKTGNY
                     DLVLEDIKAVVAASGDKLVKVIIEACLLTDDEKVKACQLSQEAGADYVKTSTGFSTGG
                     ATVADVALMRKTVGPDMGVKASGGARSYEDAIAFIEAGASRIGASSGVAIMNGAQADG
                     DY"
     gene            5450..5839
                     /locus_tag="U1021_000007"
     CDS             5450..5839
                     /locus_tag="U1021_000007"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HEM4710610.1"
                     /translation="METIDLIELAVKNSQKAYVPYSKFPVSAVLVAKTGEIFTGVNIE
                     NASFGLTNCAERTAIFKAISEGVKDFSEIIIYGETEKPISPCGACRQVMAEFFDKDLK
                     VTLVAKDKSTVEMTVGELLPYSFTDLT"
     gene            5920..6987
                     /locus_tag="U1021_000008"
     CDS             5920..6987
                     /locus_tag="U1021_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family protein"
                     /protein_id="HEM4710611.1"
                     /translation="MNKKLVGLGLAAVAAVSLAACGNRASKSSSSEASSSADTSVKAA
                     IVTDIGGVDDRSFNQSAWEGLQEWGNAAGLSKGNGYDYFQSANESEYITNLDSAVAGG
                     YNLVFGIGFALESAIAEVAPNNPDTHYVIVDSVVPDQDNVVSVGFADHEASYLAGVAA
                     AKSTKTNHVGFIGGMEGVIIDRFEAGFVAGAKSVNKDIKITVDYAGSFGDAAKGQTLA
                     AAQYAAGADVIFHASGGTGNGVFAAAKAENETRNEADKVWVIGVDRDQSAEGEYTSKD
                     GKSSNFVLASTLKQVGTSVKDIATKAVAGEFPGGQVLQFSLKDKGVELAETNLSEDAS
                     KAVADAKQAILDGKVEVPEKP"
     gene            7182..8717
                     /locus_tag="U1021_000009"
     CDS             7182..8717
                     /locus_tag="U1021_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4710612.1"
                     /translation="MTKDYVIEMRNITKIFGEFVANDHINLNVRRGEIHALLGENGAG
                     KSTLMNMLAGLLEPTSGEIVINGQSVKIDSPSKAAQLGIGMVHQHFMLVDAFTVAENI
                     ILGSETTKGGVIDLKKAIAEIKELSAKYGLEVDPTAKVADISVGAQQRVEILKTLYRG
                     ADLLIFDEPTAVLTPAEIAELLKIMKALVEEGKSIILITHKLDEIRAVADSVTVIRRG
                     KSIETVAVEGATNQDLAEWMVGRSVSFKTEKVEASPKEVILSIKDLVVNENRGIPAVK
                     GLSLDVRAGEVVGIAGIDGNGQSELIQAITGLRKVKSGSITIKGEEVVGKTPRKITEM
                     QVSHVPEDRHRDGLVLPMTVAENFALQTYYKEPISKNGILNYNIINEKARALMEEFDV
                     RGASELVPIKALSGGNQQKAIIAREIDRNPDLFIVSQPTRGLDVGAIEYIRKRLIAER
                     DKGKAVLVVSFELDEILDVSDRIAVIHDGVIHGIVEPAKTNKQELGVLMAGGHIEKGE
                     EHA"
     gene            8710..9771
                     /locus_tag="U1021_000010"
     CDS             8710..9771
                     /locus_tag="U1021_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4710613.1"
                     /translation="MLNKYKNLALPLMAVVSGILLGAIVMLVFGYDPIWGYEELFYSA
                     FGNIKSIGEIFRAMAPLVFTALGFAVASRAGFFNVGLSGQAYVGWVFAGWFALANPDL
                     PRPVLILGTVLIAMLAGGIAGAIPGILRAYLGTSEVVVTIMMNYILLYSCNYIIRDVF
                     ADSLMKNTDSTVNVSANASYQTEWLRALTDNSRMNIGIFFAIIAVFVIWFLLTKTTLG
                     FEIRSVGLNPTASDYAGMSAKRTIILSMIISGALAGLGGAIQGLGTFQNVYIQSGNLD
                     IGFNGMSVALLASNSPLGIPLAAFLFGVLSVGAPGMVRAQIPPELINVVTASIIFFIG
                     VKFIFEQLLKSRNKAKGAK"
     gene            9773..10726
                     /locus_tag="U1021_000011"
     CDS             9773..10726
                     /locus_tag="U1021_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000060306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4710614.1"
                     /translation="MNVSILALLISQMLIYSAPLIFTSLGGVFSERGGIVNVGLEGIM
                     VIGAFAGVVFNIEFAGTFGNATPLLAVIVGGLAGVVFAAIHAMATINFRADHVVSGTV
                     LNLLAPALGVFLVKVIYNKGQTDSITESFGKFSFPVLADIPIIGEIFFKNTSLMGYVA
                     IATAFLAWFILYKTKFGLRLRSVGEHPQAADTLGINVYAMRYAGVLIAGFLGGVGGAV
                     SAQSVNINFSATTIVGSGFIALAAVIFGKWNPIGAMLASLFFGLSQSLAVVGGQLPGL
                     KDIPTVYLQIAPYLITVIALSAFFGKAVAPKADGINYIKSK"
     gene            complement(10905..11888)
                     /locus_tag="U1021_000012"
     CDS             complement(10905..11888)
                     /locus_tag="U1021_000012"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003050541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HEM4710615.1"
                     /translation="MTATKQHKKVILVGDGAVGSAYAYALVNQGIGQELGIIDINKDR
                     TQGDAEDLSHALAFTFPKKIYSAEYSDAHDADLVVLTAGLPQKPGETRLELVEKNLRI
                     NQQIVTEIVNSGFNGIFLVAANPVDVLTYSTWKFSGFPKERVIGSGTSLDSARFRQAL
                     AEKIGIDARSVHAYIMGEHGDSEFAVWSHANVAGVKLYDWLQDNRDIDEQGLVDLFVS
                     VRDAAYSIINKKGATYYGIGVALARITKAIFDDENAVLPLSVYQAGQYEGVEDVFIGQ
                     PAIIGAHGIVRPVNIPLSEAELQKMQASAKQLKDIIDDAFANPEIAAGVKN"
     gene            12077..14521
                     /gene="gyrA"
                     /locus_tag="U1021_000013"
     CDS             12077..14521
                     /gene="gyrA"
                     /locus_tag="U1021_000013"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003244540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEM4710616.1"
                     /translation="MQDKNLVTVNLTNEMKSSFIDYAMSVIVSRALPDVRDGLKPVHR
                     RILYGMNELGITPDKPHKKSARITGDVMGKYHPHGDGAIYEAMVRMAQWWSYRHMLVD
                     GHGNFGSMDGDGAAAQRYTEARMSKIALEMLRDINKNTVNFADNYDASEREPEVLPAR
                     FPNLLVNGTTGIAVGMATNIPPHNLGETIEAVKLVMDNPEVTTREIMEVLPGPDFPTG
                     ALVMGKSGIHRAYETGKGSIVLRSRTEIEEYGNGRERIVVTEFPYMVNKSKVQEHIVK
                     LVQEKRIEGITAVRDESNREGVRFVIEVRRDASANVILNNLFKQTQLQTNFSFNMLAI
                     QNGVPKILSVRQILESYIEHQKEVVTRRTRFDKEKAEARAHILEGLLIALDHIDEVIR
                     IIRNSETDALAQAELMEKFDLSERQSQAILDMRLRRLTGLERDKIQSEYDELVALIAD
                     LADILAKPERVVQIIKDELEEVKRKYADPRRTELMVGEVLSLEDEDLIEETDVLITLS
                     NQGYIKRLAQDEFQAQKRGGRGVQGTGVKDDDFVRELVSTSTHDRLLFFTNKGRVYRL
                     KGYEIPEYGRTAKGLPVVNLLKLEENEAIQTIINVTKDQEADSYLFFATRQGVVKRTS
                     VSEFANIRQSGLKALNLKEDDELINVFLTNGQADIIMGTKFGYSVRFTETDVRNMGRT
                     ATGVRGINLREGDQLVGATMISDDQEVLVLTEKGFGKRTPASEYPTKGRGGKGIKTLK
                     VAEKNGSLAGLTTVSGDEDIMVITDTGVIIRTSVANISQTGRSTMGVKVMRLNDEAKI
                     MTFALVDAAEIKEEKE"
     gene            14528..15277
                     /locus_tag="U1021_000014"
     CDS             14528..15277
                     /locus_tag="U1021_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A sortase"
                     /protein_id="HEM4710617.1"
                     /translation="MSKRENKKKRKGSFWRNLLTVVLILISLALIFNTSIRNFIIGWN
                     TNKYQISNVTTEDIEKNKQAETTFDFDQVQSISTEAILAAQWDAQRLPVIGGIAVPEL
                     GINLPIFKGVFNTSLMYGAGTMKENQEMGKGNYALASHHIFGVTGAADVLFSPLDRAK
                     NGMKIYITDKTNVYTYVIDSVEIVSPESVYVIDDVEGRTEVTLVTCTDYNATQRIIVK
                     GVLESTTPYNETAKDILDSFNKSYNQYDYGQ"
     gene            15390..16070
                     /gene="radC"
                     /locus_tag="U1021_000015"
     CDS             15390..16070
                     /gene="radC"
                     /locus_tag="U1021_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEM4710618.1"
                     /translation="MYQIEFKEEAILPRERLVEVGAERLSNQELLAIFIRTGTKKEPV
                     SILSNKLLNRLESLAALRELSIEELQSLTGIGRVKAIEIKAMIELGKRINQSELLLNE
                     RILGSEKLGRKMIHEIGHKKQEHLVALYLNTQNQIISQKTIFIGSVNRSIAEPREILH
                     YAVKCMATSIIIVHNHPSGSVQPSRNDLLFTENLKESCEKLGLVLLDHLIVGNKDYYS
                     FREESELF"
     gene            complement(16067..16759)
                     /locus_tag="U1021_000016"
     CDS             complement(16067..16759)
                     /locus_tag="U1021_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEM4710619.1"
                     /translation="MKKPVIGISGNEYKTGDHTEPLLSYTQTCLVQAIEDAGGLPLIL
                     PATEPDLAKYYIHLIDKLILTGGQNVQPSYYHEERTIDSDNYLPKRDEFELALIRAAQ
                     EDQKPIFGICRGLQLYNVAQGGSLHQSISEHWQDIDGQEVSQTIQLTQNSPLYDIYES
                     DPSVNSFHRQAIKDLAPDLEIIALSDNQQIIEAVHSAYPTKFLGVQWHPELLYGKREI
                     EKDLFHYIVNKL"
     gene            complement(16763..17401)
                     /locus_tag="U1021_000017"
     CDS             complement(16763..17401)
                     /locus_tag="U1021_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HEM4710620.1"
                     /translation="MKNDKKSNIPRATAKRLSLYYRIFKRFYAGNIEKASSKEIAEAI
                     GIDSATVRRDFSYFGELGRRGFGYNVKELMDFFADILNDTSITNVMLVGVGNMGRALL
                     HYRFHERNKMKIVMAFEADDNPAVGTTDENIPIHAISEIKERISEANSQTAILTVPSV
                     KAQEVTDILVEAGVKGILSFSPVNLSVPKDVVVQYVDLTSELQTLLYFMRKG"
     gene            complement(17536..17739)
                     /locus_tag="U1021_000018"
     CDS             complement(17536..17739)
                     /locus_tag="U1021_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4649 family protein"
                     /protein_id="HEM4710621.1"
                     /translation="MIEIHYLDAYKQERIQTFENKDVAILAFAGCLTLPDYYPVTSIT
                     QDGQALDYKGTIGDLYRYLQTLD"
     gene            complement(17741..18085)
                     /locus_tag="U1021_000019"
     CDS             complement(17741..18085)
                     /locus_tag="U1021_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1831 domain-containing protein"
                     /protein_id="HEM4710622.1"
                     /translation="MAFQQSVTLKDCNFTYHISPAIKKYTLRDNTFEQTKAGHYQLTR
                     LLEEIPNSNQGFLLKIIINQDLTGFKINITDKSGLHLVNIFKPESNKVIQEKFYFLMD
                     SLIDRDIFTKEA"
     gene            complement(18087..19202)
                     /locus_tag="U1021_000020"
     CDS             complement(18087..19202)
                     /locus_tag="U1021_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEM4710623.1"
                     /translation="MIYLDNAATTALSPTALQRMMEVAQENYGNPSSIHQSGRKANQC
                     LRQSRQEIAQILSASPEQIIFTSGGSEADTLAIQGYALAQQSKGKHLITTAIEHHAVL
                     HAMQYLEDRFGFEVTYIQPVNQVITAQQIQDALRSDTILVSVMFANNETGQLLPIKEI
                     GELLADHQAVFHVDAVQAIGKIAFSPSDYGIDLLAASAHKFHGPKGTGFLYSKVHKFD
                     SLIHGGKQEQQHRAGTENLPAIAAMATALTEQYESLDMHHKHVSELRQHIIEGLSGLN
                     YYLNQAGPHLPHVLNIGFPGKLNEQLLMQLDLAGIAVSSGSACTAGVVQNSHVLEAMY
                     GKDSHRLKESIRISLSEINTKEEIDTLIIELKKILGG"
     gene            complement(19213..20190)
                     /locus_tag="U1021_000021"
     CDS             complement(19213..20190)
                     /locus_tag="U1021_000021"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HEM4710624.1"
                     /translation="MVQPLGEHNIKLFSLNSNRDIAEKIADSAGIPLGKLSSRQFSDG
                     EIQINIEESVRGVDVYIIQSTSYPVNNHLWELLIMIDACKRASANTITAVIPYFGYAR
                     QDRTASPREPITAKLVANMLVKAGVDRVLTLDLHASQIQGFFDIPVDNLLTEPLFAAY
                     YMEKGLCGEDVVIVSPKNSGIKRARNIAEFLNAPIAIIDYAQDDSERSEGYIIGDVAG
                     KKAILVDDILNTGRTFSQASKIVQEGGATEIYAVASHGLFAGTAAQLLDEAPIKEILV
                     TDSVASKEQHPKNIAFLTASDLIADAIHRIQEHQPLSPLFKFTSPEKEN"
     gene            complement(20334..20900)
                     /locus_tag="U1021_000022"
     CDS             complement(20334..20900)
                     /locus_tag="U1021_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HEM4710625.1"
                     /translation="MKNHLEIEYKTLLTKSEYKRLLTDFSDVSPILQTNHYIDTPDLD
                     MKNHRFSLRIRTFKDSAELTLKIPQEVGNQEYNQVLDIQTAHHLLENFQLPAGQISDI
                     ISATEIPLDKLAVWGILTTKRYEKQTSIGLMALDENDYVGQKDYELEVEVTDADAGKI
                     LFDEFLKKKSIQFKYASSKVARTAAHMK"
     gene            20987..21658
                     /locus_tag="U1021_000023"
     CDS             20987..21658
                     /locus_tag="U1021_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase family protein"
                     /protein_id="HEM4710626.1"
                     /translation="MDFNWEEFLDPYIQTVGELKIKLRGIRKQYRKANRHSPIEFVTG
                     RVKPIESIKEKMALRHIKLENLAQDMQDIAGLRIMVQFVDDIEEVLAILRKRKDMQIV
                     HERDYINNMKASGYRSYHVVIEYPVDTINGNETVLAEIQIRTLSMNFWATIEHSLNYK
                     YKGNFPEEIKKRLEVTAKIAYELDEEMRKIRNDIQEAQALFDPAYRKLNDGVGNSDDT
                     DEEYR"
     gene            21633..22460
                     /locus_tag="U1021_000024"
     CDS             21633..22460
                     /locus_tag="U1021_000024"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002933692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HEM4710627.1"
                     /translation="MIQMKNTGRKKIALLASRNPKSEAVSKELWTKLKEANFILTPKN
                     PDIVISIGGDGMLLSAFHKYEKLIDRVRFVGIHTGHLGFYTDYRDFEVDKLIENLKLD
                     TGARVSYPILNVKVKMTDGRIVEARALNEATVKRLSKTMVADIIINNVPFERFRGDGI
                     SVSTPTGSTAYNKSLGGAVLHPTIEALQIAEVASLNNRVYRTLGSSVVVPKKDKIVIE
                     PKHSDRYSIAVDNKTFVYDSIESIEYQIDNSKIHFVATPSHTSFWNRVKDAFIGEVE"
     gene            22460..23353
                     /locus_tag="U1021_000025"
     CDS             22460..23353
                     /locus_tag="U1021_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEM4710628.1"
                     /translation="MRFEFIADQHTKIKTFLKKHGVSKGLLAKIKYTGGNIWVNDIER
                     NATYLLDIGDRVTIDIPAEEDLTGSLKPISFSLDIVYEDDHFLAINKPVGYASIPSAL
                     HSSTIANFVKGYLIEQNYENKQVHIVTRLDRDTSGVMLFAKHGYAHARLDKQLQAKLI
                     HKRYYALVKGNGQLEETGDIIAPIGRPEDSIITRCVTKNGKYAHTSYRVVQSWGDIHL
                     VDIQLHTGRTHQIRVHFSHIGFPLLGDDMYGGSLECGIERQALHCHNLAFDNPFSAER
                     IDLEAPLPEDFQAVINQLISK"
     gene            23371..24345
                     /gene="pta"
                     /locus_tag="U1021_000026"
     CDS             23371..24345
                     /gene="pta"
                     /locus_tag="U1021_000026"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEM4710629.1"
                     /translation="MKIFEQLATKLEGKKVRIVLPEGEEPRILQATKRLVNESDVVPV
                     LLGNPDRIKIYLDIEGITEGFEIIDPAHYDRYDEMVAALVERRKGKVSEEQAHELLKD
                     VNYFGVMLVYMGVVEGMVSGAIHSTASTVRPALQIIKTEPGVSKTSGAFLMVKGEERY
                     IFGDCAINIDPDAQTLAEIAINSARTAKMFGIDPKVAMLSYSTKGSGAGPKVDKVVEA
                     TKIAQKLRPELDLDGELQFDAAFVPTTGKLKAPGSSVAGQATVFIFPGISAGNIGYKI
                     AERMGGFAAVGPVLQGLNQPVNDLSRGCNPDDVYNLTLITAVQALEHR"
     gene            24347..26086
                     /locus_tag="U1021_000027"
     CDS             24347..26086
                     /locus_tag="U1021_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4710630.1"
                     /translation="MKFLSRYFKDYIKESILGPVFKLLEACFELLVPLIIAYIVDTII
                     PNGSQGNLVAMLFLLVGIACIGIIVSLIAQYYSAKAAVGVTKELTNDLYQKVLSLPKS
                     SRDILSSSSLLTRLTSDTLQIQTGINTFLRLFLRAPIVVFGSLIMAFYISPSLSAYFL
                     GMIILLIFIVTVISVMTSRIYQSMRKELDGLVGQVRETVTGWRVIRAFGQREREIKAF
                     QGINQIYKKQQLQAGFWSSLLSPLTFLVVNGTLLILIWQGNIAISHNLLEQGMLVALI
                     NYLLQILVELVKMILVVSTLNQTYISAQRIQEVFDQTSEDVESSLPRVVSEDKEIIFS
                     VRHLSFSYPKSAEESLSDIAFDLRKGQFMGIIGGTGSGKSTLVDLLQALYSVPTNQLS
                     LFIDGKSPKNLKEWRQQIAIVPQQAQLFAGTIRSNLSLGLEEISDSDLWSALEIAQAK
                     SFIEDKGGLDSPVEAFGKNFSGGQRQRLTIARAVLQKAPILILDDATSALDYLTESRL
                     LAAIRQELPGQNLIMVSQRTNSLRTANQILVLEQGRQVGLGRHEDLLRSSAIYQEIHQ
                     SQQQGEEDSYETI"
     gene            26073..27815
                     /locus_tag="U1021_000028"
     CDS             26073..27815
                     /locus_tag="U1021_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4710631.1"
                     /translation="MRQSSFKELVRLVLHQPLRMSLMLVGTLVQVLLTVYLPILIGQA
                     VDAVLIANGQVLLGILGKMVMVILLNTLMQWYLPLVTNRLVYGMVADLREQVYVKLHQ
                     MPLSYLDRQSVGDLVARFSSDSEQLTNGLLMIFNQFFIGILTIFLTIFTMARLDLTMM
                     LVVVALTPVSLLVARYIAKKSYGYYRQQTQARGKQSQLLEESISQLTLVQSFNAQEQF
                     TQGFQVVNDQYATYSQQAIFASSTVNPSTRFINAIIYALLAGLGALRIMAGNFTVGSL
                     TTFLNYASQYSKPFNDISSVLSELQSALACADRLFAILDLDSIDDQAERKIDSEELKG
                     AISFDNVSFSYSPDRSLIEHLDIDVKAGQKVAIVGPTGAGKSTMINLLMRFYDVTAGQ
                     IVLDGVPISQYSREDLRRQIGMVLQETWIKSGTIHDNIAYGYPNATRELVIEAAKAAN
                     ADFFIRQLPQGYDTVLADGGEGLSQGQRQLLSIARVFVKIPKILILDEATSSIDTRTE
                     ILVQEAFAKLMEGRTSFIIAHRLSTIQSADLILVMVDGKIVEQGNHEALMAEQGVYYQ
                     MQTSQQTEEDESVR"
     gene            27799..28191
                     /locus_tag="U1021_000029"
     CDS             27799..28191
                     /locus_tag="U1021_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEM4710632.1"
                     /translation="MKVLDKLNLQPITVLDDYQATMLNEKEVLLTTKVTEKSLNPYGM
                     AHGGFLFTLADSVAGLTTVARGSYSVTLQSNIHYMKAAKLGDTLSVIGSCTHDGSRTK
                     VVEVKIENQDKQLLASASFTMFVTGKVE"
     gene            28369..29529
                     /gene="mutY"
                     /locus_tag="U1021_000030"
     CDS             28369..29529
                     /gene="mutY"
                     /locus_tag="U1021_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEM4710633.1"
                     /translation="MLNLKEYGIEMWPEEKIQAFRKALLDWYDANKRDLPWRRTKDPY
                     AIWVSEIMLQQTRVDTVIPYYERFLYHLPTISDLAQAPEEVILKLWEGLGYYSRVRNM
                     QKAAQQMVEDFDGQFPTTHAAISSLKGIGPYTAGAISSIAFNLPEPAVDGNVMRVLSR
                     LFEVDYDIGLPANRKIFQAMMELLIDPERPGDFNQALMDLGSDIESPVNPRPQDSPVK
                     AFSAAYLNGTMDKYPIKAPKKKPISVAYQGFLIRNKDNQFLLEKNNEAGLLSGFWSFP
                     LLEKGAIVDKQVSLFEVAEEVVQPDIRQSFTELYGLAVDWQEQEFGIVQHIFSHRKWQ
                     IEMVEGVAETLNLPESKELKWVSVEDFPTYPFAKPQQKMWENFIKEKEKQKS"
     gene            complement(30212..31012)
                     /locus_tag="U1021_000031"
     CDS             complement(30212..31012)
                     /locus_tag="U1021_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4710634.1"
                     /translation="MILGDILKEYRSKNKLSMDKFAELSGLTKGYISILEKNQHPKTK
                     KALLPTMDTLEKVAKGMAISVGELIEQLDSNQDIALTITPSQFKLFQQPIHPEVQTLD
                     NELKGDFHAQWLTFGQEQLAAMQTTSVTPSASILHLDDYREQIELPVPGKVSAGTGYW
                     QDTDMNNLVSFYNDEIPDNQSYDTIAQVVGDSMAPHIEDGDYLFIRLAPHIPLNTIGI
                     FSVNGENFVKKFKGNYLQSLNPDYDDIYFSPEDDIRPIGQVVDIYSPD"
     gene            31143..31613
                     /locus_tag="U1021_000032"
     CDS             31143..31613
                     /locus_tag="U1021_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710635.1"
                     /translation="MKRMTEISWNDIYKEWETYANHFGLTTPINTEKLRDQKSKDFGK
                     GSLITLDLLADYDTDSEKTAAIWVASFCRDLIQDYAYLLNGRAYLTVNQIYFQALKQF
                     QSEAVIWSKPLTRLQPKLFVSYRLLENLDLSHYSCVVELAMLQASLVRTQILEK"
     gene            31633..32175
                     /locus_tag="U1021_000033"
     CDS             31633..32175
                     /locus_tag="U1021_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710636.1"
                     /translation="MFNLLNKKAEVSKVAEYWNDTLIERGILSADELLEGKCWRCKSS
                     HGVAVCQIVSSKWSKDTSLANQMVLCLSCQHEKPDVADTEIVWQWLEVENNERYWTLQ
                     GMAEYEKMYKKSVLQELWDMGIRDGEEVETLVNKVTSLSRKNDIVLNRATLAGLFRCE
                     IEQMRRKAFLNWTGMFKLVS"
     gene            complement(32401..33444)
                     /locus_tag="U1021_000034"
     CDS             complement(32401..33444)
                     /locus_tag="U1021_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004269878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEM4710637.1"
                     /translation="MATITKRGNSYRATVSLYKKGKYKRETKTFSNRKDAELWTLEME
                     LEKGRGKNIAERSTLFPDFYRNWVHTVKKTDVREATFINYKRTLVIVDDLFDGIQLKH
                     LDDLIMQKKIDQYAETHSKKTVKELVLKIRGSLKYAYARGLISNDFGHLLKSKGQEQP
                     KRNILSITKLKKLRQYCLSHTEDEFNVLVALALETGARRGELLGIKKEDIFEYGIKIL
                     RSISPTNDDTQLKTKHSKRDISINEGVYQAVTKLAQTKEGYIFDWNGFKQASQLQKLL
                     KQLGLTKTTFHGLRDTHASFLFSKDISLDYISRRLGHNSILTTQQYYLELIPEKKHQQ
                     DADALSLLNDLSL"
     gene            complement(33812..34567)
                     /locus_tag="U1021_000035"
     CDS             complement(33812..34567)
                     /locus_tag="U1021_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710638.1"
                     /translation="MALGNVEKDTEGWIELVNQYLQYCIEIGLSPYTQATYKVALAKV
                     LGVSSTNFIATQPRTRANRMNNRVLHKDYRLSNKNNDYWHKVVTATGLRKSELIHVTG
                     DALQRGRDGRWYLNLAGHKHHTKERRDRWSPIMATSQEEEEWLVAIFQRAGEKKVFHV
                     PKDLILDDFDGKKVPTALKSHKYPAEYAERVYRSVAREISKIRNRKEVIHLRKELVDI
                     SLDRKACKIVTKALGHNRPEEFPRSYAYILLKR"
     gene            34846..35613
                     /locus_tag="U1021_000036"
     CDS             34846..35613
                     /locus_tag="U1021_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM4710639.1"
                     /translation="MNKRERLEEITRLVNKKGTVRISEIVELLNVTDMTVRRDFIELE
                     EQGVLTKIHGGARSNKAFQYREYSHSEKHIQNKEAKQEIAERAAQLIEDGDTVFLGPG
                     TTVAFLAEAIKNPRLTVITNCMPVFTILSQKKTEEFQVFLLGGEYRQVTESFVGEITN
                     TSLEKMRFSKIFFSGNGLKGTDVMTSTLAEAYTQNIAIKHSLEKYLLLDASKIGKDDF
                     TSFCDLNDVTALVTDMNAKDENYQLLSKHIEIITTKS"
     gene            35819..36241
                     /gene="lacA"
                     /locus_tag="U1021_000037"
     CDS             35819..36241
                     /gene="lacA"
                     /locus_tag="U1021_000037"
                     /EC_number="5.3.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002982747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-6-phosphate isomerase subunit LacA"
                     /protein_id="HEM4710640.1"
                     /translation="MTIIIGADPAGSKLKDIIKDYLLEKSYDFKDVSDGSDFVDTTLA
                     VVAEVNQQEGNLGIVIDAYGVGPFMTATKVKGMIAAEVSDERSAYMTRGHNNSRIITI
                     GSEIVGEGIAKNIVKGFVEGEYDGGRHQIRVDMLNKMC"
     gene            36268..36783
                     /gene="lacB"
                     /locus_tag="U1021_000038"
     CDS             36268..36783
                     /gene="lacB"
                     /locus_tag="U1021_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-6-phosphate isomerase subunit LacB"
                     /protein_id="HEM4710641.1"
                     /translation="MKIAIGCDHIVTYEKIAVVDYLKNQGYEVLDFGTYDNVRTHYPI
                     FGKKVGEAVASGQADLGICICGTGVGINNAVNKVPGVRSALVRDMTSALYAKEELNAN
                     VIGFGGKITGELLMCDIIEAFIKAEYKPTEANKRLIEKIAAVETLNQEQANPEFFTEF
                     LDKWECGEYHD"
     gene            36793..37725
                     /locus_tag="U1021_000039"
     CDS             36793..37725
                     /locus_tag="U1021_000039"
                     /EC_number="2.7.1.144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016250260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-6-phosphate kinase"
                     /protein_id="HEM4710642.1"
                     /translation="MILTITLNPSVDIAYQLDTFHLDTVNRVENVQKTAGGKGLNVTR
                     VLKQIGEDVVATGFIGGEIGSYVKKQLTRNDVKNSFVEIGSETRNCIAVLHDGKQTEI
                     LEQGPTIQEHEALNFIEHLEIVLNNVDVVVISGSLPKGLASNYYVQLVELCKKFGIAV
                     VLDCSGEALKNVLESQQKPTVIKPNTEELSQLIGKEVTDDIQELKSVLSGQLFQGIDW
                     IVVSLGAQGAFAKHNDKFYRVRIPKIKVVNPVGSGDSTVAGIAAGLVHALPDAELLKN
                     ANVLGMLNAQEEQTGYVNLENAESLYSQIEVEEV"
     gene            37727..38704
                     /gene="lacD"
                     /locus_tag="U1021_000040"
     CDS             37727..38704
                     /gene="lacD"
                     /locus_tag="U1021_000040"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase"
                     /protein_id="HEM4710643.1"
                     /translation="MVVTADKRKYMEKVSNEAGIISALAFDQRGALKKMMAKHQAEEP
                     TVEQMEELKTLVSEELTQFSSSILLDPEFGLPASRARDEQCGLLLAYEKTGYDTSSTS
                     RLPDCLVEWSVKRLKEEGADAIKFLLYYDVDGDSYVNLQKQAYIERLGSECQAEGLPF
                     FLEILSYDETIEDNASVEFAKVKPRKVNEAMRVFSDERFGVDVLKVEVPVNMNFVEGF
                     GTGEVVYTKEEAAEYFRQQEASTHLPYIYLSAGVSAKLFQDTLVFAHEAGAKFNGVLC
                     GRATWAGVVPVYIEQGEEAAREWLRTVGRENIEGLDAVLSQTATSWLEK"
     gene            38893..39726
                     /locus_tag="U1021_000041"
     CDS             38893..39726
                     /locus_tag="U1021_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017770255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HEM4710644.1"
                     /translation="MFRIIQSLNNNAALVKNEHGEQAVVMGLGITFQKKKGDLIVKDK
                     IENIFSLKNDEAKENFLTLLKDIPLDFISATYTVINHLVETYHYPVQEYLYVTLTDHI
                     YCAYQAVLKNAYQESKLPNISAEYPLEYKMAREALAMFREKLLNDFPNDETGKIALHL
                     INAKGETIHPTSEEHDISKKIIAEVEQILIENGIKRSKENSNFYDRFMIHLSYFLNYL
                     DRSHQSNESIASLEQYIKLQNPRAHQVGSQIFEMITSLVDEPVNDSERFYIVLHIQRL
                     L"
     gene            39908..40225
                     /locus_tag="U1021_000042"
     CDS             39908..40225
                     /locus_tag="U1021_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009730102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM4710645.1"
                     /translation="MNREEITLLGFEIVAFAGDARSRLMEALAAAQKGDYAKAEELVE
                     AANACIVEAHHAQTSLLQKEAAGEDLAFSVTLMHGQDHLMTTLLLKDMMSHMIELYKR
                     GDK"
     gene            40225..41904
                     /locus_tag="U1021_000043"
     CDS             40225..41904
                     /locus_tag="U1021_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003048452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose transporter subunit IIBC"
                     /protein_id="HEM4710646.1"
                     /translation="MNKLIEFIEKGKPFFEKISRNPYLRAIRDGFIAAMPVILFSTLF
                     LMVAFVPNIFGFTWSDEAVAAIMKPYGYTMGIVAVLVAGTTAKSLTDAFNRQLPKTNQ
                     INFISTMIASISGFLLLASDGIEGGFANGYMGTKGLLTAFLAAFITVNIYKVCVKNNV
                     TIRMPDEVPPNVSQAFKDVIPYALSIFVLYGIDLVTRQFLGTNVAEAILKLFEPLFTA
                     ADGYVGITIIFGAYALFWFVGIHGPSIVEPAIAAITYANIETNFQLLQAGQHADKILT
                     SGTQMFIVTMGGTGATLVVPFMFMWLTKSKRNKAIGRASVVPTFFGVNEPILFGAPLV
                     LNPVFFVPFILAPIANVWIFKFFVDTLKMNSFSVNLAWTTPGPLGIVMGTNFAPLAFA
                     LAILLVFVDVLIYYPFLKVYDEQILAEEQSGKVENSLKEKVAANFNTAQADAILEKAA
                     VDTEISEQTNVLVLCAGGGTSGLLANALTKAAKEYGVPVTATAGSYGAHREILPEYQL
                     VILAPQVASNYDDIKQETDALGIKLAKTEGAQYIKLTRDGQGALDFVKQQF"
     gene            41975..43381
                     /gene="lacG"
                     /locus_tag="U1021_000044"
     CDS             41975..43381
                     /gene="lacG"
                     /locus_tag="U1021_000044"
                     /EC_number="3.2.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003060941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-galactosidase"
                     /protein_id="HEM4710647.1"
                     /translation="MVKTLPKDFIFGGATAAYQAEGATQTDGKGRVAWDKYLEDNYWY
                     TAEPASDFYNRYPVDLELSEQFGVNGIRISIAWSRIFPTGFGAVNPKGVEYYHKLFAE
                     CHKRHVEPFVTLHHFDTPETLHSNGDFLNRDNIEHFVNYAAFCFKEFPEVNYWTTFNE
                     IGPIGDGQYLVGKFPPGIQYDLAKVFQSHHNMMVSHAKAVKLYKDAGYSGEIGVVHAL
                     PTKYPYDPSNPDDVRAAELEDIIHNKFILDATYLGYYSEKTLEGVRHILKVNGGELDL
                     RDEDFAALDAAKDLNDFLGINYYMSDWMRAHDGETEIIHNGKGEKGSSKYQIKGVGRR
                     ESPVDIPKTDWDWIIYPQGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDGTVYDD
                     GRIDYVKKHLEVISDAISDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQERY
                     PKKSAYWYKKVAETQVIE"
     gene            43446..44339
                     /locus_tag="U1021_000045"
     CDS             43446..44339
                     /locus_tag="U1021_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase family protein"
                     /protein_id="HEM4710648.1"
                     /translation="MFELKNENLTVQFSELGGQIISIKDKDGIEYLWQGDPTYWSGQA
                     PVLFPICGSLRNDWAIYEPAERPTFTGTIPRHGLVRKMLFKNVSSTENSLEFSISSNE
                     ETVKNYPFEFELSINYSLLGNTIRTEYRVKNLEGHRKLPYFIGGHPGFNCPLLDGESY
                     EDYYLEFEKVESCTVPRSFPETGLLDLRDRRPFLENQKTLDLSYKLFEHDAITLDQLA
                     SRKVTLKSKNHQKKLSIAFDDFPYLVIWSTTNQSPFIALEPWSGLSTSLEESDIFNAK
                     RNISYVAPKEVDKKHFDIIIE"
     gene            44675..45295
                     /locus_tag="U1021_000046"
     CDS             44675..45295
                     /locus_tag="U1021_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016250587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710649.1"
                     /translation="MNDCDFKDFVGKNFADELPDDDSKIMIHFHTMILELGSIIAALE
                     IVKIVNDEWHDRVVQSSIRYDIVRNVTYESLFYRVVFGITKIFDVREKNGIFKILSKL
                     RHSTKDRSLLSILSTIQEGIDKEQKNIDEIKLLRDKHLAHLDKEMVFSTERLDIGILY
                     YYFEAIEIKSIYTACIELYNTLYGDNQQQVELPKREIILKRFFLEE"
     gene            46092..47372
                     /locus_tag="U1021_000047"
     CDS             46092..47372
                     /locus_tag="U1021_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015604466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase"
                     /protein_id="HEM4710650.1"
                     /translation="MTREFSFETLQLHAGQEVDSASKSRAVPIYQTTSYVFEDAQEAE
                     DLFALRKSGNIYTRITNPTVSTFENRVAALEGGIGALATSSGMAAITYTILALAHAGD
                     HIVVATTLYGGTFNLFKETLPRYGITTSFVDIDDFEAVEAAIKDNTKLVFIETLGNPV
                     INIPDLEKLAEIAHNHHIPLVSDNTFATPYLINVFSHGVDISVHSATKFIGGHGTTIG
                     GVIVDSGKFDWAASGKFPQFVEEDPSYHNISYTRDIGAAAFIVAVRVQLLRDTGAALS
                     PFNAFLLLQGLETLSLRVERHVSNAEKIVDFLLSHPQVESVNYPSLPDSPYKALADKY
                     LPKGVGSIFSFQVKGGAEEARKVIDSLEIFSNLANVADAKSLVVHPATTTHAQLAPED
                     LLAAGVTPNQIRLSVGLENINDLIEDLQLALDKL"
     gene            complement(47450..48982)
                     /locus_tag="U1021_000048"
     CDS             complement(47450..48982)
                     /locus_tag="U1021_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM4710651.1"
                     /translation="MLLATQHLTLDHQKDLRNLVHDLNFIVNPGDKIAIIGEEGNGKS
                     SLLLTLMDSTLVADYLLISGSIHRYFHSPVYIPQGLPLKMAELTLNDYFFGDMGSNID
                     YHLLYLYADQLQFDSERFSSQQLIGSLSGGEKLKIQLIKSLATPSDIIFLDEPSNDLD
                     LDTLLWLENYIITSPKTILFVSHDEDFLSRTATKIIHLESVKKKTLAQTKVEELGYQD
                     YALKRHQAYQKQVQQARNDQKEFDKAMNKHLRQKSQVRHTLLNTHDATLGRLIAKKMK
                     NVLSREKRYERMKENLTQVPFHEDAISLFFSDISPLPARKQVLHLENFQLNIGGRQLV
                     QNIHFNLNGQEKIGIIGQNGIGKSSFLKIIYQKLRQRADINLGYMPQHYTEVLDESKT
                     PLDFLLENGNREQERLILTHLASLQFTRQEVHHKICELSGGQKAKLLLLKMVLEQVNF
                     LLLDEPSRNFSPTSQPYIRQLFADYPGGLVCVSHDRRFLKEVCQRIYRLTENGLEELE
                     QI"
     gene            49282..49773
                     /locus_tag="U1021_000049"
     CDS             49282..49773
                     /locus_tag="U1021_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4710652.1"
                     /translation="MAITGIEQADILEIDKQVRLRRYDGQHDFAFEWHQDLELVWLID
                     GDQERYSLDLLDRMYDYLSKNGECYFIEIFEDGQFIPIGDVTLFADDFAIAIGDKRYW
                     EKGIGTKVLHRMIERARDVGLEEILVEEIYDWNTGSHKLFEKCGFEAVEKTKKGWSYK
                     MIL"
     gene            complement(49829..50569)
                     /locus_tag="U1021_000050"
     CDS             complement(49829..50569)
                     /locus_tag="U1021_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004254183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM4710653.1"
                     /translation="MAQLKINVHDLHKSYGKNEVLKGITAKFYEGDVVCIIGPSGSGK
                     STFLRTMNLLETITSGQVTVDGYDLTDPKTDVDAFRSNVGMVFQHFNLFPHMSVLDNI
                     TFAPIEHKLMDKSEAEKVGMELLEKVGLADKRDAMPDSLSGGQKQRVAIARALAMNPD
                     IMLFDEPTSALDPEMVGDVLNVMKDLAEQGMTMLIVTHEMGFARKVANRVIFTDGGEF
                     LEDGTPEQIFDNPQHPRLQDFLDKVLNV"
     gene            complement(50569..52767)
                     /locus_tag="U1021_000051"
     CDS             complement(50569..52767)
                     /locus_tag="U1021_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding
                     protein/permease"
                     /protein_id="HEM4710654.1"
                     /translation="MKKKLLMLLASILPVFFIFTGVKADDTIDVVFDNAYAPFEFKDS
                     DQIYKGLDVDIINEVAKRSGWTMTQSFPGFDAAVNAVQAGSADALMAGTTITEARKKV
                     FTFSDPYFDTKIVIATTKANTISSYKDLKGKTVGVKNGTAAQNFLEENKDKYGYNVKT
                     FDTGDLMYNSLSAGAVDAVMDDEAVIQYAIQQGQDLSIDIEGEAIGSFGFSVKKGSQY
                     EYLVEDFNKALAEMKKDGTYETIMNKWLGASTTSAESTDYSSRLSLTGNASAKATPVK
                     SSYTIVADSSFAPFEYQDELGNYVGIDMELIKAIAEQQGFTITIQNPGFDAALNAVQA
                     GQADAVIAGMSITDARKEIFDFSNAYYTSNILLAVKNGSDIASYEDLKGKTVGAKNGT
                     ASYSFLEENKAKYGYTLKAFDEASSMYDSLNSGSIDALMDDEAVLLYAIQQGRNFATP
                     IPGEKSGEYGFAVKKGANPELIEMFNNGLAALVESGKYDEILNKYFNSTEEASTTTST
                     VDETTIVGLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSS
                     VFVDVVRGIPLMIVAAFIFWGIPNLIESITGQQSPINDFVAGTIALSLNSGAYIAEIV
                     RGGIQAVPVGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISA
                     IGLVELFQAGKIIIARNYQSFRMYAILAIIYLVVITLLTRLARKLEKGGK"
     gene            52965..54950
                     /gene="uvrB"
                     /locus_tag="U1021_000052"
     CDS             52965..54950
                     /gene="uvrB"
                     /locus_tag="U1021_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HEM4710655.1"
                     /translation="MINRNTENQFKLVSKYSPSGDQPQAIETLVDNIEGGEKAQILMG
                     ATGTGKTYTMSQVIARVNKPTLVIAHNKTLAGQLYSEFKEFFPENAVEYFVSYYDYYQ
                     PEAYVPSSDTYIEKDSSVNDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYS
                     DSVVSLRPGQEISRDQLLNSLVDIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHAFR
                     VEFFGDEIDRIREIESLTGKVLGDVDHLAIFPATHFVTNDDHMETAIAKIQAELEEQL
                     KVFEAEGKLLEAQRLKQRTDYDIEMLREIGYTNGVENYSRHMDGRSEGEPPYTLLDFF
                     PEDYLIMIDESHMTMGQIKGMYNGDRSRKEMLVNYGFRLPSALDNRPLRREEFESHVH
                     QIVYVSATPGDYEMEQTDTVVEQIIRPTGLLDPEVEVRPTMGQMDDLLGEINARVEKG
                     ERTFITTLTKKMAEDLTDYLKEMGVKVKYMHSDIKTLERTEIIRDLRLGVFDVLIGIN
                     LLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNSEGHVIMYADKVTESMR
                     KAMDETARRRQIQMAYNEEHGIIPQTIKKEIRDLISVTKAVTQDKEEVVDFNALNKDE
                     RKAMIKKLEGQMQEAAEVLDFELAAQIRDMVIELKNM"
     gene            55184..60929
                     /locus_tag="U1021_000053"
                     /pseudo
     CDS             55184..60929
                     /locus_tag="U1021_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775141.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="G5 domain-containing protein"
BASE COUNT        18322 a        10814 c        13379 g        18417 t
ORIGIN      
        1 gatctattga attctttcca ctcccttttt gttttgtgta gtttgtcaga tgcctcctaa
       61 ttatgttata cttaaacaag aatggaggta aatatgagga aagtttctcg tagcatttta
      121 acaatattat tatcggcgac agtcctttct gcttgttcag gaggagggaa aaatttaagt
      181 gaacgtttgg aagcggctaa agttgaattt tctaaagaaa aaaagcaact agaagcagaa
      241 ttaacagcat taaaagaaga ggttcaagga aatttttact accaacaatt ggatactgat
      301 aaggaacgtc atgtctatct ccaatttgtt aatggactca gcaagcggat gcaagtgatc
      361 gatattgatt ctgttaatga tgaaatatat tcgcgcgtat atttttctgt cgcccatgat
      421 tatccagaat tttactggct aacagatgaa gcagcaatgg ctggtggaat tgatatattg
      481 gatttagaag agccggtgta tccgagtgat ttatctccga cacaaaataa aatagaagat
      541 gaagtgaata agatacttgc tcagacacca aaagggtcgg actatgagaa ggttaaatat
      601 ttttacgagg tgattataag gcaaacggat tacgaccttg aagccctgca gaccaaatct
      661 gtcacgtgga gaagtcaagg aattaccagt gtgctattag ataagaaatc cgtttgtgct
      721 ggctatagtc gcaccttcca atatctatgt aaaaaagcag gcattgattg tatctatgtc
      781 acagggattg caaaaaatgg gcaaaacggt gagtttgggc atgcttggaa tctagtcaag
      841 ataaatggac aacactatgg tgttgatacg acttggggag atccagtttt tgatcaagct
      901 ataagtggag aagcgcatac agatatttca tacgattatc tatgtgtccc tgatgaaata
      961 ttagagagaa gtagaattgc tgatagcgac ctactcgact actggggaga agaacaatat
     1021 tacgaaccta gagtattggt ctatccaaag tgtacagata attcattgaa ttactatgtt
     1081 caaaagggag tttatttcac aagctttgat gaagctgcag ttttacagtc catcactgac
     1141 cagcggctac aaggtacgaa taaagtagtc ttgcaattcg gaacagcaga agcaatgcaa
     1201 caaatgatta cattggcctc tactgaaaat aatgctattt ttcaggcttt gggcgatgta
     1261 ggagagtatc agtactatta taatgaccaa acctatacat ttgaactggc agattggttt
     1321 taaggaatta gtttgaatct ctaggagcgt gttcttccct aataataaaa aatagggagc
     1381 gggaaagaca tccatggtgg ctccgccctc acccacagaa taatgaaaac aaccacaaag
     1441 ccctcactag gtgtataatc atagtgaggg ctttgtggtt gacgagttaa tgatgttagt
     1501 catcgcggga aaactgatcc actttgtccc gcctccttat gatggaaaaa ataaaaaaag
     1561 gaaacccaaa ggtttctttt ttaattaagc aagttttgat gcaagacgtg ctttatcgcg
     1621 gcttgctttg tttttgtgaa tcaaaccttt agtttctgct ttatcgattg ctgaactagc
     1681 agcacggaaa agctcttcag atgggttagc ttcaaatgct ttgattgcag tacgcatagc
     1741 tgatttttgt gctgagtttt tctcgttttg tttaacgttc aattcagcgc gtttgatagc
     1801 tgacttaatg tttgccaatg gtttcacctc caccctttct tgtactaact ataccattat
     1861 atctgaaaag agtatttttg acaagtgaaa tttatttttt tagataaatt ttatcaatct
     1921 catggttttc ggccttatga agaataatat cagcacggtt tctggttggt tcaatgaatt
     1981 tttctaagtt agctagatta atatttttcc aagtattctg ggcaatagat agaatctcag
     2041 ggtacgtcat ctgggtaaaa cgatggtaat agttgttagg gtcatttttt gccaatgtca
     2101 ataatttttg gaatcgctcc aagtaccagg tttcaatatg ctccacatca gcgtcaacgt
     2161 atatagacag gtcaaaatag tcactgacat agaggcgctg gttttgtgga ttttgaaata
     2221 cattaattcc ttcaacaatc aagaaatctg gagacttaat atcctgagtt ttgttgggga
     2281 caatatcata gatttcatgt gaatagacag gaatttggca gtcgtagccg ttttttatct
     2341 tatcaaggaa atcaatcaat ttctccatgt cataggattc aggaaaacct tttttattta
     2401 acagttgccg ttcttctaag accgcatttg gatggagaaa accatctgtt gtcactaatt
     2461 caaccttggc gtgtttaaat gtccgagcga taagaatttg cagcaatcta ctagttgttg
     2521 atttgccgac agcaacactt ccggaaacgc caatgataaa tggttgtggc ttgatagtct
     2581 tttgtagaaa taaactcttc gtaaaattta ggtctttgcg tgctttccga tagatatgga
     2641 taagattaac caaaggaaga tagatgtcag aaacctcatg taattgaatg cggtcgttaa
     2701 aacttttaat agaatttagt tcactttgac taagtggaat ggtagtctta cggtgtagtt
     2761 gttgccaagt ggctcggtca atttgttcaa aatttaaaaa ttcgtttttc atacataatt
     2821 cttcctatag gtaagcgttt caatatcgat ttcattttat catatttttc atgtaagaaa
     2881 aactcttgaa aacgttttta ggaaatgtta taataagtac atgtccaata tgtattacga
     2941 aaaaaatcct acagtagcac atgatattca tgaaatccac gtaaacttac tagacacccc
     3001 aatgtctttc ataacagatg caggtgtttt tagcaagaag atggttgatt atggtagtca
     3061 agtgctttta aaaacccttc attttgaaaa aggggcatcg gtgttggatg ttggttgtgg
     3121 ttatggacca attggtttga cacttgctaa ggtgttcagc accaagacaa cactgattga
     3181 tattaatagt agagctttgg atttagctac aaaaaatgct gagaggaatg gtgttaccgc
     3241 taaaatttat caatccaata tctacgaaaa cgtggacgaa acattcaatc atattgtttc
     3301 aaatccacct attcgggccg gaaaatcggt tgtacatgaa gtaattgctg gagcctttca
     3361 acgcttagag gcaaacggaa ccttgaccat tgtcattcaa aagaaacaag gtgcaccgag
     3421 tgccaaggct aagatggaag aggtgttcgg caactgccag ataataaaga aagacaaggg
     3481 ttactacatc cttgaaagtg tgagagaatg agagcagttg atttaattca aaaaaagcgt
     3541 gatggcttag aactatcgtc tgaagaaatc aaatggttga ttgatggata tgtagctggg
     3601 acagtaccgg attatcaaat gtcagccttg gcgatggcga tttatttcaa agggatgtca
     3661 acacgtgaga tttctgattt gacaatgtct atggttgcaa cgggtgaaca gattgatttg
     3721 tctgcaattc caggcatcaa ggtagataag cattctacag gtggtgtcgg agataaggtc
     3781 acactcatct tagcgccatt ggtagcaagt tttgatattc cagttgcaaa gatgagcggt
     3841 cgtggacttg gtcatactgg cggaaccttg gataagttag agtcaatcaa aggataccag
     3901 attgaagtta gtcaagaaga tttcatcaag caagttcaag atactggtgt tgcagttatc
     3961 ggacagtcag ataatcttgt caaagctgat aaattgctct atgcccttcg agatgtgaca
     4021 gcaaccgttg acattattcc actgattgcc agctcggtaa tgtctaagaa aattgccgca
     4081 ggtgcggatg cgattcttct agatgtaaca gtgggagaag gcgccttcat gaagaccgtt
     4141 gaagaagcac gggttctagc tcaaaccatg gtggaccttg gcaaggcggt tgggcgtaag
     4201 acagttgcag ttttgactga catgtctcaa ccagttggaa cttcgattgg aaatcgtttg
     4261 gaaattttag aggctattga aattttacag ggtaaaggtc gagaagatgt taccgaattt
     4321 atctgtgaac tagcccaaat tatgttgggg cttgcaaatg ttgagaaaag cattgaagaa
     4381 gtacgccaat atattgacaa tggtgcagcg ttgaagaaat ttgaagagat ggtccttgct
     4441 caaggtggtg acttagaaga tttatatcgt ccagttcagg ttacacagca agttccagtt
     4501 cttgcggagg aggatggata ccttgtaggg cttcctgcgt tggaattcgg tctctttgca
     4561 atgaaacttg gtgcaggtcg tgcagtcaag acagacgatt tagattatga aacaggtatt
     4621 gtcttccata agaaagtagg ggaagctgtt tctaagggtg aacaaatcgc aacgatttat
     4681 gccaatgaaa atatttcgga aaacatgctt acaaatttcc gaaaaaatgt taaaatagat
     4741 aaagaaagtg taaaaacgaa agaaatcata gagattattt cttaatgtac ggagaaaact
     4801 atgaaattga ataaatatat tgaccataca atcttgaaac ctgagacaac acaagagcag
     4861 gttgaaaaga ttttggcaga agcaaaagaa tatgattttg caagtgtttg tgttaaccca
     4921 acttgggttg ctttagcagc tgaaagcttg aaagatagtg atgtaaaagt ttgtacggtt
     4981 attggtttcc ctctcggagc aaacacccct gctgtaaaag cattcgaaac aaaagatgca
     5041 atttcaaatg gagcagatga gattgacatg gttatcaata tcggtgctct gaaaactgga
     5101 aattacgatt tggttttgga ggatattaaa gctgttgtag cagcaagtgg tgataaacta
     5161 gtcaaagtta tcatcgaagc atgcctcctt actgatgatg agaaagtgaa agcttgtcaa
     5221 ttatctcaag aagctggtgc ggactatgtt aaaacatcta caggattttc tacaggcggt
     5281 gctacagtag cggatgttgc cttaatgaga aaaacagtgg gtcctgacat gggagtgaag
     5341 gcttccggtg gtgcacgttc gtatgaagat gccattgcct ttatcgaagc aggagcgtct
     5401 cgtattggtg cgtcatcagg cgtggcaatc atgaatggag cacaggcgga tggagactat
     5461 tgatttaatt gaattagctg taaaaaacag tcaaaaagca tacgtaccgt actcaaagtt
     5521 tccagttagt gcagttcttg tagctaagac aggggaaata tttacgggtg taaacattga
     5581 aaatgcaagc tttggtttga ccaattgcgc tgaaaggaca gctattttca aggccatttc
     5641 tgaaggtgtg aaagattttt ctgagatcat tatttatggt gaaacagaaa agccaatatc
     5701 tccttgtgga gcttgtcgcc aagttatggc agaatttttt gataaggatt taaaagtgac
     5761 cttggtcgct aaagataaat cgacagtcga gatgacagtc ggggaattac ttccatattc
     5821 ctttacagac ttaacctagt ctgtatgaca gtcatttgac tgtagcaata ttactctgca
     5881 acaatgtagt tgcaaaaaga tttttaggag ggttcagaaa tgaacaagaa acttgttgga
     5941 cttggtctag cagctgttgc ggctgtatct ttggctgcat gtggtaaccg tgcttcaaaa
     6001 agcagtagct cagaagcatc ttcatcagcg gacacatctg tgaaagctgc tatcgttact
     6061 gacattggtg gtgttgatga ccgttcattt aaccaatctg cttgggaagg tcttcaagaa
     6121 tggggtaatg cagctggtct ttctaaaggt aatggctacg attacttcca atcagctaat
     6181 gaatcagaat acattacaaa ccttgattca gctgttgctg gtggttacaa ccttgtgttc
     6241 ggtattggtt ttgccttgga gagtgcgatt gctgaggtag caccaaataa tcctgacaca
     6301 cactatgtaa tcgtggatag tgttgttcca gatcaagaca acgtagttag cgtaggtttc
     6361 gcagaccatg aagcatcata tcttgctggt gttgctgcag ctaagtcaac taagacaaac
     6421 catgtaggtt tcatcggtgg tatggaaggt gttatcatcg atcgctttga agctggtttc
     6481 gttgcaggtg ctaagtctgt aaacaaagac atcaagatta cagttgacta tgcaggttca
     6541 tttggtgatg ctgctaaagg tcaaactctt gcagctgctc aatatgctgc aggtgcagac
     6601 gtgatcttcc acgcttctgg tggtactggt aacggcgtat ttgctgctgc taaagcagaa
     6661 aatgaaactc gtaatgaagc agataaagtt tgggtaatcg gtgttgaccg tgaccaatca
     6721 gcagaaggtg aatacacttc taaagatggt aagtcttcta actttgtatt ggcttcaaca
     6781 ttgaaacaag ttggtacttc agttaaagat attgcaacta aagctgttgc aggtgaattc
     6841 cctggtggtc aagtacttca attctcattg aaagataaag gtgttgaatt ggcagaaact
     6901 aacctttcag aagatgcttc taaagcagtt gcagatgcta agcaagctat cttggatggt
     6961 aaagtagaag ttcctgaaaa accttaatga atttcttttc gacaattccg attcggcgac
     7021 ccgacggggt cgccgttttc gggctgagat ttttctcagt aaagcctatc agctatggta
     7081 ggttttactg acaaaaatgg tatagttgat gaagaatttt aaggtactaa agtggtactg
     7141 aagaattttc agaaggctat agtcagaaag gataatagat tatgactaag gattatgtca
     7201 ttgaaatgcg caatatcact aagatatttg gtgaatttgt agcaaatgac cacatcaatt
     7261 tgaatgtcag acgtggtgaa atccatgccc ttcttggtga gaatggtgcg ggtaaatcta
     7321 ctctgatgaa tatgcttgct ggcttgttgg aacctacaag cggtgaaatt gttatcaacg
     7381 gtcaatccgt gaagattgac tctccatcca aagcagccca attgggtatt ggtatggtgc
     7441 accaacactt tatgttggtt gatgctttca cagttgctga gaacatcatt cttggttctg
     7501 aaaccaccaa aggtggcgtg attgacctta aaaaagctat cgcagaaatt aaagaacttt
     7561 ctgctaaata tggtcttgaa gttgatccaa ctgcaaaggt tgcagatatt tctgtgggtg
     7621 cacagcaacg tgtagaaatc cttaaaacac tttaccgtgg agcagacctt ttaatttttg
     7681 atgagccgac agctgtattg acccctgcgg aaattgcaga gctcttgaaa attatgaaag
     7741 ccttggttga agaaggtaaa tctattattt tgattacgca caaattggat gaaattcgtg
     7801 cagttgccga tagtgtaaca gttattcgtc gaggtaaatc aatcgaaaca gttgccgttg
     7861 agggagcaac aaaccaagat ttggctgagt ggatggttgg acgttccgtt tcctttaaaa
     7921 cagagaaagt tgaagcgagt cctaaagaag ttattttgtc aattaaggat ttggttgtca
     7981 atgaaaaccg tggtattcca gcagttaagg gcttgtcgct tgatgttcga gcaggtgagg
     8041 ttgttggtat tgccggtatc gacggaaatg gtcaaagtga gttgattcag gcaatcactg
     8101 gtttacgtaa ggtaaaatct ggctcaatca ctatcaaagg tgaggaagta gttggtaaaa
     8161 ctccacgtaa aattacagaa atgcaagtga gccacgttcc cgaagatcgt catcgcgatg
     8221 gactcgttct tccgatgact gttgctgaga actttgcgct tcaaacttac tataaagaac
     8281 cgatttcaaa aaatggtatc ttgaactata atatcattaa tgaaaaagca cgcgcgttaa
     8341 tggaagaatt tgacgttcgt ggggcaagtg aactcgtccc aatcaaggct ctttcaggcg
     8401 gtaaccagca aaaagctatc atcgcgcgtg aaatcgatcg caacccagac cttttcattg
     8461 ttagccaacc aacacgcggt ttggacgttg gtgctattga gtatattcgt aaacgtctca
     8521 ttgcagaacg tgataagggt aaggctgttc ttgttgtcag cttcgaattg gatgaaattt
     8581 tggatgtatc agatagaatt gctgttatcc atgatggtgt catccatggt attgttgaac
     8641 ctgctaagac caataaacaa gagttaggtg tcttgatggc aggtggacat attgagaagg
     8701 gagaagaaca tgcttaataa atataagaat ttggcccttc cattaatggc tgtggtcagc
     8761 ggtatcctac ttggagcgat tgtcatgctt gtttttggct acgatccaat ttggggctat
     8821 gaagagttat tctattcagc ttttggtaat ataaaatcaa ttggtgaaat tttccgtgca
     8881 atggcaccac ttgttttcac tgctctcggt ttcgcagtag ctagtcgtgc aggtttcttc
     8941 aacgttggtt tgtctggtca ggcctatgtt ggttgggttt ttgctggatg gtttgccttg
     9001 gcaaatcctg acttaccacg tccagttttg attttgggaa cagtcttaat tgccatgttg
     9061 gcaggcggta ttgctggagc tattccaggt attctacgtg cctatttggg aacaagtgaa
     9121 gttgtcgtta cgattatgat gaactacatc ttactctatt catgtaacta tatcattcgt
     9181 gatgtatttg cagatagttt gatgaagaat acagactcga cagttaacgt gtcagcaaat
     9241 gcctcttacc aaacagagtg gctccgtgca ttgacagata actcacgtat gaatattggt
     9301 attttctttg ccattattgc agtttttgtg atttggttcc tattgaccaa aacgactctt
     9361 ggttttgaga ttcgctcagt ggggcttaac ccaacagcat cggattatgc gggtatgtct
     9421 gcgaaacgta cgattattct atctatgatt atttcaggtg ctcttgcggg tcttggggga
     9481 gctatccaag gtttgggtac tttccaaaac gtttatatcc aaagcggtaa cttggatatt
     9541 ggttttaatg gtatgtcagt agcgctttta gcttctaatt caccgttagg tattccattg
     9601 gctgcctttc tattcggtgt tctttctgtc ggtgccccag gtatggtacg tgcacagatt
     9661 ccacctgaat tgatcaacgt tgttacggca tcaatcattt tctttatcgg tgtgaaattt
     9721 atttttgaac aattattaaa atctagaaat aaagcgaaag gagcgaaata agatgaatgt
     9781 ttcaattctt gccttactca tttcgcaaat gttgatttat tcagcaccct taatctttac
     9841 cagtcttgga ggagttttct ctgaacgcgg tggtattgta aacgttggtc tagaaggaat
     9901 catggttatc ggtgcctttg ctggtgttgt tttcaatatc gaatttgcag ggacatttgg
     9961 taatgctact ccattattag ctgttattgt aggaggtctt gctggtgttg tttttgccgc
    10021 tattcatgcg atggcgacga ttaatttccg tgcagaccac gttgtatcag gtacggtgtt
    10081 gaaccttttg gctccagcat tgggagtttt tctagtcaag gttatctata ataagggtca
    10141 aactgatagt attactgaat catttggtaa attttcattc cctgtcttgg cagatattcc
    10201 aatcattggt gaaattttct tcaaaaatac aagcttgatg ggttatgtag ctattgcaac
    10261 agcatttctt gcttggttca tcctttataa aaccaagttc ggtttgcgcc ttcgttcagt
    10321 aggtgaacat ccgcaagcag cggatacttt gggaatcaat gtctacgcta tgcgttatgc
    10381 aggtgtgttg attgctggtt tccttggtgg tgttggtgga gctgtaagtg ctcaatcagt
    10441 gaatatcaac ttctctgcaa caacaatcgt aggttcaggt ttcatcgctc tagcagctgt
    10501 gattttcggt aagtggaatc caattggcgc tatgcttgcc agtctattct ttggtctttc
    10561 gcaaagtttg gcagtagtgg gtggacaatt accaggattg aaagatattc caacggttta
    10621 tcttcaaatt gcaccatatt tgattactgt tattgctctg tctgctttct ttggtaaagc
    10681 agtcgctcct aaagcagacg gtatcaacta tatcaaatct aaataaaaag gtccactgga
    10741 cctttttatc atgttctttg ctgtacagga aatgaataat tgtcctattc aaaggaagag
    10801 gagttataga gtcaactgtc acagatggaa ttgctatgtt acgttatgat attagaaggt
    10861 aaaaaaggcg agctattgct cacctttttt actattttat ataattagtt tttaacacca
    10921 gctgcaattt ctgggtttgc gaaagcatca tcgatgatgt ctttcaattg tttagcagat
    10981 gcttgcattt tttgcaattc agcttcgctc aatgggatat tgactggacg aacgataccg
    11041 tgggcaccga tgatagcagg ttgaccgatg aagacatctt caacaccttc gtattggcca
    11101 gcttggtaaa cagacaatgg aagtactgca ttttcatcat caaagattgc tttagtgata
    11161 cgtgcaagtg caacaccgat accgtagtaa gttgcgcctt ttttgttgat gattgagtag
    11221 gctgcatcac gaacagatac aaacaagtca acaagacctt gctcatcaat atcgcggtta
    11281 tcttgcaacc agtcgtacaa tttcacacca gcaacgttgg catgtgacca aactgcaaat
    11341 tctgagtcac cgtgctcacc catgatgtaa gcgtgaactg aacgtgcgtc gataccgatt
    11401 ttctcagcca atgcttgacg gaaacgagct gagtcaagag aagtaccaga accgataaca
    11461 cgctctttag ggaaaccaga gaatttccaa gttgagtaag tcaatacgtc aacagggtta
    11521 gcggcaacaa ggaagatacc gttgaaacca gagttaacga tttctgtaac gatttgttgg
    11581 ttgatacgaa ggtttttctc taccaattca aggcgagttt cacctggttt ttgtggcaaa
    11641 ccagctgtca aaacaaccaa gtctgcgtca tgagcatctg aatactcagc agaatagatt
    11701 tttttaggga atgtgaaggc caatgcgtgg ctcaagtctt ctgcatcacc ttgagtacgg
    11761 tctttgttga tatcgatgat acccaattct tgaccaatcc cttggttaac aagagcataa
    11821 gcataagcag aacctacggc accgtcaccg acaaggatta cttttttgtg ttgtttagtt
    11881 gcagtcattg ctaaacatct ccttagtttt atttggggat gacttcatcc cgaccataat
    11941 acattctagc atgttttaag ctttttgtca cttgtgaaag cgcctttgaa aatgtttaca
    12001 tgctagtttc caacaaagaa atttattcgc caatatggta taatagaagc acaatgactg
    12061 ttgaaagagg catataatgc aagataaaaa cttagtaacg gttaatctga ccaatgagat
    12121 gaaatcatcc ttcatcgact atgcgatgag tgttatcgtt tcacgtgctc tgcctgatgt
    12181 acgtgatggt ctgaagccgg ttcatcgccg tattttgtat ggaatgaatg aattaggaat
    12241 tacaccggat aaaccacata aaaaatcagc ccgtatcaca ggggatgtta tgggtaaata
    12301 tcacccgcat ggagatggtg cgatttacga agcaatggtt cgtatggcgc aatggtggag
    12361 ctatcgtcac atgttagttg atggtcacgg aaactttggt tccatggatg gcgacggagc
    12421 agccgctcag cgttatacag aagctcgtat gagcaagatt gcgcttgaaa tgcttcgtga
    12481 tattaacaag aacacggtaa attttgcgga taactatgac gcgagtgaac gtgagcctga
    12541 ggttttacct gctcgtttcc ctaaccttct ggttaacgga acgactggta tcgccgttgg
    12601 tatggctacc aacattcctc cacacaactt gggtgagact atcgaggcag ttaagctggt
    12661 tatggacaat cccgaggtaa caacacgtga gattatggaa gtcttgcctg gaccagattt
    12721 tccgacaggt gccttggtta tggggaaatc tggaattcac cgtgcttatg aaactggtaa
    12781 aggttcaata gttcttcgtt cccgcacaga aattgaagaa tatggaaatg gtcgtgaacg
    12841 cattgttgtt acagagtttc catatatggt caataagtcc aaggttcaag aacatattgt
    12901 caaattagtc caagaaaaac gtattgaagg aatcactgct gttcgagacg aatccaaccg
    12961 tgagggtgta cgatttgtta tcgaagttcg tcgtgatgct tctgctaacg ttattttgaa
    13021 taacctattc aagcaaacac agcttcaaac caactttagt ttcaacatgt tggccatcca
    13081 aaatggtgta ccgaaaatcc tttctgtacg tcagattcta gagtcttata ttgaacacca
    13141 aaaagaagta gtcactcgtc gtacacgatt tgataaagaa aaggctgagg cgcgtgctca
    13201 tatcttagaa ggcttgctga ttgctcttga ccatattgat gaagtcatac gtatcattcg
    13261 taattcagaa acggatgcac ttgctcaagc tgaattgatg gagaaatttg acctttctga
    13321 acgtcagagt caggctattc ttgatatgcg tcttcgtcgt ttgacaggtt tggaacgcga
    13381 caagattcaa tcagaatatg atgagttagt ggccttgatt gcagatttgg ctgacattct
    13441 agctaagcct gagcgtgttg ttcagattat taaagacgaa ttagaagaag tcaaacgtaa
    13501 atatgctgac ccacgccgta cagaattgat ggttggtgaa gttctttccc ttgaagatga
    13561 ggacttgatt gaagaaacgg atgttttaat caccttgtca aaccaaggct acatcaagcg
    13621 tttggcacag gatgagtttc aagctcagaa gcgtggagga cgtggggttc aaggaactgg
    13681 cgtcaaggat gatgattttg tacgagaatt agtctctaca agcactcatg atcgcttgct
    13741 cttcttcact aacaagggac gtgtctaccg tctcaaaggc tatgaaatcc cagaatatgg
    13801 tcgtactgca aagggacttc cagtggtcaa tttgcttaaa ttggaagaaa acgaggcaat
    13861 tcaaaccatt atcaatgtaa ctaaggacca ggaggcagat agctatctct tctttgcaac
    13921 ccgccaaggt gttgtaaaac ggactagtgt gtcagaattt gccaatattc gccagagcgg
    13981 tctgaaagct ttgaatttga aagaagacga tgaactcatc aatgttttct taacaaatgg
    14041 tcaagcagac attattatgg ggactaagtt cggttattct gtccgtttca ctgaaacaga
    14101 tgttcgtaat atgggccgta cagcaacagg tgttcgtggt atcaatttac gcgagggaga
    14161 ccagttagtt ggcgctacta tgatttctga tgaccaagaa gtactcgtat tgacggaaaa
    14221 aggttttggt aaacgtacgc cagctagtga gtatccaacc aaaggtcgtg gtggtaaggg
    14281 tatcaagact cttaaagttg ctgagaagaa tggttctcta gcaggtttga caacggtatc
    14341 tggtgatgaa gatattatgg ttattaccga tactggcgtt attattcgta caagtgttgc
    14401 caatatctct caaactggtc gttcaaccat gggtgtaaaa gtgatgcgct tgaatgatga
    14461 agcgaaaatc atgacctttg ccttggtaga tgctgccgaa attaaagaag aaaaggaata
    14521 aatagtcatg tcaaaacgtg aaaacaagaa gaagcgtaaa ggttcttttt ggcgcaatct
    14581 tttaacagtt gtattgatac tgatttccct agcgttgata ttcaacacct ctatccgtaa
    14641 ttttattatc ggctggaata cgaataaata ccagattagc aatgttacga cagaggatat
    14701 cgaaaagaat aaacaggctg aaacaacatt tgatttcgat caggttcagt ctatttctac
    14761 agaggctatt ttagcagctc agtgggatgc acaacgctta cctgtaattg gtggaattgc
    14821 ggttcccgag cttggtatca accttcctat ttttaaagga gtcttcaata cttcgctcat
    14881 gtatggagct ggtactatga aggaaaacca agagatgggg aaaggaaatt atgcgttggc
    14941 cagccatcat atttttggtg taaccggtgc ggcagatgtt ctcttttcac cgcttgatcg
    15001 tgctaaaaac ggcatgaaaa tctatattac tgacaagacc aatgtttaca cctacgttat
    15061 tgatagtgtg gaaattgttt cgcctgaaag tgtctatgtc attgatgatg tagaaggacg
    15121 tacagaagtt acgttggtaa catgtacgga ctataatgca acgcaacgta tcattgtaaa
    15181 aggagttctt gaatcaacaa ctccatataa tgaaactgca aaagacatct tagattcctt
    15241 caataagagt tataatcagt atgattatgg acaataaaac atctatatat taaggataaa
    15301 gaagtggtat aagactgggg agataatctt tggttttata tggcttcttt tttgcaagat
    15361 tttacgaata gataggtgag gaggaaatta tgtatcaaat tgaatttaaa gaagaggcca
    15421 ttctacctag agaacgttta gtagaagttg gagctgagcg tctcagtaat caggaactac
    15481 tagcaatttt tattagaact gggacaaaaa aagaacctgt ttctattctc tccaataaat
    15541 tattgaatcg tttggagagt ttagcggctc taagagaact atcaattgaa gaattgcaaa
    15601 gtttgactgg aattgggcgc gtcaaggcga ttgaaattaa ggctatgatt gaacttggaa
    15661 aacgtatcaa tcaatcagag ctactcttaa atgagagaat tttgggaagt gagaagttgg
    15721 gacgtaagat gattcatgaa atcgggcata agaagcagga gcatctagtt gcactttatc
    15781 tcaataccca gaaccagatt atcagtcaaa aaacgatttt tattgggagt gttaatcgta
    15841 gcattgcaga accacgtgaa attttgcatt acgcagtaaa atgtatggca acatcgatta
    15901 tcatcgttca taaccacccg tcgggttcag tacaacctag taggaatgat ttgctattta
    15961 cggagaattt aaaagagtcc tgcgaaaagc taggactggt attattagat catttaattg
    16021 ttggaaacaa ggattactat tcttttagag aagaaagtga gttattttaa agtttattga
    16081 caatatagtg gaagaggtct ttttcaatct cacgtttacc gtagagtagt tcaggatgcc
    16141 attgaacccc taaaaattta gttgggtagg ctgaatgaac tgcttcaata atctgttgat
    16201 tatctgatag tgcaatgatt tctaagtcag gggctaagtc tttgatagcc tgacggtgaa
    16261 atgagtttac acttggatcg gactcatata tgtcgtaaag tggactattt tgagtcagtt
    16321 gaatcgtttg actgacttct tgtccgtcta tgtcttgcca atgttcagaa attgattgat
    16381 gaaggctacc accttgagct acattgtaga gctgtagacc tcggcagata ccgaagatag
    16441 gtttctgatc ttcctgggca gcccttatga gggccaattc aaactcgtca cgctttggta
    16501 gataattatc gctgtcaata gttctttctt cgtgatagta acttggctgg acattttgtc
    16561 ctcctgttag gatgagtttg tcaataagat ggatataata ttttgccaaa tctggctctg
    16621 tagctggaag gatgagtggg agcccaccag catcttcaat agcttgtacg aggcaagtct
    16681 gggtataaga aagcaggggt tctgtatgat cccctgtttt atattcattt ccagaaatac
    16741 caataactgg ttttttcatt gcttatcctt ttcgcataaa gtagagtagt gtctgtaatt
    16801 cactagtcaa atcaacatac tggacaacga catcttttgg gacagacaag ttaactggtg
    16861 aaaagctcag aattcccttg acaccagctt ccacaagaat atcggtcact tcttgtgcct
    16921 tgacgctggg taccgttaga atggctgtct gagagtttgc ttcgctgata cgttccttga
    16981 tttctgagat tgcatggatt gggatatttt catctgtcgt tccaacagct ggattatcat
    17041 ctgcttcaaa agccatgact attttcattt tatttcgttc gtggaagcga tagtgtagca
    17101 aggcccgccc catattccca actccaacaa gcataacatt ggtgatggag gtatcattta
    17161 gaatatccgc aaagaaatcc atcaactctt tgacgttgta gccaaagcca cgacgcccaa
    17221 gctctccaaa ataggaaaaa tctcggcgga cggtagctga atcgattccg atagcttcgg
    17281 caatttcttt tgaactagct ttttcaatat ttcctgcata gaaacgttta aaaatgcgat
    17341 aatagaggga tagacgtttg gcagtagcgc gtggaatatt agatttttta tcgtttttca
    17401 ctttagactc ctttatttcg atagaatacg ctttatcgat tatttatata ttaaacagtt
    17461 ctttattcta ttctagtcca agtttgtgaa aaaatcaaca gattgatttt aaaaaaagat
    17521 taaacaggaa actgtctaat ctagtgtttg taaatagcga tagagatctc cgattgtccc
    17581 tttgtaatcc agagcttgtc cgtcttgtgt aatgctggta actggataat agtctgggag
    17641 ggttaagcaa ccggcaaaag ccagaatggc tacatcttta ttctcaaatg tttggatacg
    17701 ttcttgctta taagcgtcaa gatagtgaat ttcaatcata ctaagcctct tttgtaaaga
    17761 tgtcacggtc aatcaagcta tccatgagga aatagaattt ttcttggata accttgttac
    17821 tttctggctt aaaaatgttt accagatgaa gaccagactt gtcggtaatg ttaattttaa
    17881 aaccagttag gtcttgattg ataataattt tcaagaggaa tccttggttt gaatttggaa
    17941 tttcttccag aagacgtgta agctgatagt gacctgcttt ggtttgttca aaggtgttat
    18001 cacggagtgt atattttttg atagcagggc taatgtgata agtaaaatta caatctttta
    18061 aggtaactga ttgttggaat gccattttaa cctccaagta ttttctttag ttcgatgata
    18121 agagtatcta tctcttcttt tgtattgatt tcagataggc tgatacgaat ggattctttc
    18181 agacgatggg agtcttttcc atacatagct tctaaaacat ggctattttg gacaacacct
    18241 gccgtacatg cagaaccgct agaaacagcg atacctgcca aatctagttg catgagtagt
    18301 tgttcattaa gtttaccagg aaaaccgata ttaaggacat gagggagatg aggtccagcc
    18361 tgattgagat aatagtttaa gccagacaat ccctcaataa tatgttgtcg cagttcactg
    18421 acatgcttat gatgcatatc taaggactca tattgttctg ttagggcagt cgccatagca
    18481 gcaatagcag ggagattctc agtacctgct cgatgttgct gttcctgctt tccgccgtgg
    18541 atcaaggaat caaatttatg aactttacta tacaggaatc ccgtcccctt tggaccatgg
    18601 aatttatggg cagaggccgc gagcaagtca attccgtagt cagagggaga aaatgcaatt
    18661 tttccaattg cttggacagc atctacatga aagacggcct gatgatcggc tagaagctct
    18721 ccaatttcct tgatgggaag tagctgaccg gtctcattgt tagcaaacat gacgctgact
    18781 aaaatagtat ctgaccgaag ggcatcctga atttgttgag cggtgattac ttgattgact
    18841 ggttggatat aggttacctc gaacccaaac cgatcctcta gatactgcat ggcatggagg
    18901 acagcatggt gttcgatagc cgtagtaatc aggtgttttc ctttggattg ttgcgcaagt
    18961 gcatagcctt gaatagctaa agtatcagct tcggagcctc cagatgtgaa aataatttgt
    19021 tcgggagagg cggagagaat ctgagcaatc tcttgacgac tttgtctaag acattgattg
    19081 gctttccgac cgctttgatg aatactggag gggtttccat aattttcttg agccacttcc
    19141 atcatccgtt ggagtgcagt aggagataga gcagtggttg ctgcattatc taaataaatc
    19201 aaagagttac tcctagtttt ctttttcagg actagtaaat ttgaaaagtg ggctgagtgg
    19261 ctgatgttct tggatgcggt ggatggcatc tgcaatcaag tcactagctg ttaggaaggc
    19321 gatattttta ggatgctgtt ctttgcttgc aacagaatcg gtaactaata tttctttgat
    19381 tggtgcttca tctaagagtt gggctgcagt tcctgcaaag agaccatggc tggcaactgc
    19441 ataaatttca gtagcaccac cttcttggac aatttttgaa gcttgtgaga aagtgcgacc
    19501 agtattgaga atatcgtcca ccaaaatagc ttttttacca gcaacatcac ctataatata
    19561 gccttcagaa cgctcagaat catcttgagc gtagtcgata atcgcaatcg gtgcatttag
    19621 aaattcagcg atattacgcg cgcgtttgat accagaattt ttaggactca caatgacgac
    19681 atcttcaccg cagagtcctt tttccatgta gtaggctgca aaaagtggtt ctgtaaggag
    19741 attgtctact ggaatatcaa agaaaccttg aatttgtgaa gcgtgcaaat caagagtcaa
    19801 tacacggtcg acaccagctt taaccagcat atttgcaact aatttagctg taattggttc
    19861 gcgtggagaa gcggtacggt cttgacgagc atagccgaaa taagggatga ccgctgtaat
    19921 ggtgttggca ctagcacgtt tacaagcatc gatcataatc aataattccc acaagtgatt
    19981 attgaccgga tagcttgttg attggataat gtagacgtct acgccacgta cagattcttc
    20041 aatgttaatt tgaatctcac catcagaaaa ctgacgagaa gacagctttc caagaggaat
    20101 tccagcagaa tcagcaattt tttcagcaat atcacggttg ctattgagtg agaataattt
    20161 aatgttatgt tcaccgagtg gttgtaccat tttaaagtaa ctccttttac acactgagct
    20221 tttatgatga cataaaagta tttttacaat agatagttct attctatcaa aaaaatgaaa
    20281 aattttcagt agtgaaacta aaaaatcaac cttatttggc tgatttttta tagttatttc
    20341 atgtgggcag cagttcgtgc gaccttacta ctagcatatt tgaattgaat tgatttcttc
    20401 ttcaggaatt catcaaaaag aattttccct gcatctgcat cggtcacttc gacttctaat
    20461 tcgtaatctt tttgtcccac ataatcattt tcatcgaggg ccataaggcc tatagatgtc
    20521 tgtttctcat agcgttttgt cgtgaggatt ccccagacag caagtttatc aagtggaatt
    20581 tcggttgcag aaataatgtc agaaatttgt ccggctggta gttgaaaatt ttccagtaaa
    20641 tgatgagcag tttggatgtc tagaacttgg ttatattctt gatttccgac ttcttgtgga
    20701 atttttaagg ttagttctgc tgagtcctta aatgtacgaa tacggagtga aaagcggtga
    20761 ttcttcatat ctaggtctgg ggtatcaatg tagtggtttg tttgaagaat tgggctcaca
    20821 tctgaaaagt cagtaagcag gcgtttgtat tcggatttag tcagtaaggt tttatactca
    20881 atttcaaggt ggtttttcat gcagtaaacc ctttcaatgt gttataatag attagtcttt
    20941 gtgttattct aatacaattt aaaagttttg acaagaaagg ggccgtatgg actttaactg
    21001 ggaagaattt ttagacccct atattcagac agttggtgaa ttgaaaatca aactacgggg
    21061 gattcgcaag cagtatcgca aggctaatcg gcattctcca attgagtttg tcacaggacg
    21121 ggtaaaaccg attgaatcca ttaaagaaaa gatggccctg cgacatatca aattggaaaa
    21181 tcttgctcaa gatatgcaag atattgccgg tcttcggatt atggttcaat ttgtggacga
    21241 cattgaagaa gtattagcta ttttgcggaa acgcaaggat atgcaaattg tgcatgaacg
    21301 ggattatatc aataatatga aagcctctgg ttaccgttca tatcatgtgg tgattgagta
    21361 tcctgtggat actataaatg gcaacgagac ggttctggca gaaatccaga ttcgaaccct
    21421 ttcaatgaat ttctgggcta caattgaaca ttctctgaat tataaatata aggggaattt
    21481 tccagaagaa atcaagaaac gcttggaagt tacagcaaaa attgcctatg aattagatga
    21541 ggagatgcga aaaatccgca acgacattca agaagcgcag gccttatttg atcctgccta
    21601 tcgcaaactg aatgacggtg tgggcaacag tgatgataca gatgaagaat acaggtagaa
    21661 aaaaaatcgc tctgctcgct agtcgaaatc ctaagagtga agcggtgtcc aaagaattat
    21721 ggacaaagtt aaaagaagca aattttattt tgactcctaa aaatccagat attgtcattt
    21781 ctatcggtgg agatgggatg cttttatctg cttttcacaa atatgaaaag ttgattgatc
    21841 gtgtacgttt tgtaggaatt cacacgggtc atttggggtt ttatacagat tatcgcgatt
    21901 ttgaagtgga caagctgatt gaaaatctta agcttgatac aggtgctaga gtatcgtatc
    21961 cgattttaaa tgttaaggtc aagatgacag atggtcgcat tgtcgaggcg cgtgccttaa
    22021 atgaggcgac agtaaaacgt ctttctaaga ccatggtcgc agatattatt attaacaatg
    22081 tgccctttga acgcttcaga ggggatggaa tttcggtttc aacgccgaca ggctcaacag
    22141 cctataacaa gtcattaggt ggtgctgttt tacatccaac aatcgaggca ttgcagattg
    22201 cagaagtggc aagtttgaac aatcgtgttt accgcacctt gggttcatcc gttgttgtcc
    22261 ctaaaaaaga caagattgtg attgaaccaa agcatagtga ccgttactcg attgcggtag
    22321 acaataagac ttttgtctat gatagtattg aaagtataga gtatcagata gacaatagta
    22381 agattcattt tgttgcaaca ccgagtcata ctagtttttg gaatcgggtt aaggacgcct
    22441 ttattggaga ggtggagtaa tgcggtttga attcattgct gaccagcata cgaaaataaa
    22501 gactttcctt aaaaaacacg gtgtctctaa aggcctatta gcgaagatta agtacactgg
    22561 tggtaatatt tgggttaatg acatcgagcg caatgcaact tacttgcttg atattggaga
    22621 tagggttaca attgacatac cagctgagga ggatttaacg ggaagtttga aaccgatttc
    22681 cttttcgttg gatattgtct atgaagatga tcattttctg gcgataaata agccggttgg
    22741 ctacgcctcc attccttctg ccttgcattc atccacaatc gcaaattttg taaaaggtta
    22801 tcttattgag cagaattatg agaataagca ggttcatatt gtgactcgtc tggataggga
    22861 tacatcaggc gttatgctgt ttgccaagca cggctatgcc catgcacgac tcgataagca
    22921 gttacaggcc aagcttattc ataaacgtta ttatgctttg gtgaagggga atgggcagct
    22981 agaagagaca ggggatatta ttgcccctat cggtcgtcca gaagacagca tcattacccg
    23041 ttgtgtgaca aagaatggaa aatatgctca tacttcctat cgtgttgtgc aatcgtgggg
    23101 agatattcat ttggtagata ttcaactaca tactgggcgg actcatcaga ttcgtgttca
    23161 tttttctcac attggatttc cattgttagg agatgatatg tatggtggaa gtttggaatg
    23221 tgggatagaa cgtcaagcct tacattgtca taatttggcc ttcgacaatc ctttttcagc
    23281 cgaaaggatt gatttggaag caccgcttcc tgaggatttt caggctgtca tcaatcagtt
    23341 aataagtaaa taaatttaag gagtttgttc atgaaaattt ttgagcaatt agctacaaag
    23401 ctagagggta aaaaagtacg tatcgtattg ccagaaggtg aagaaccacg tatcttgcag
    23461 gcgacaaaac gtttggtaaa tgagtcggat gtagtacccg tcttgcttgg aaacccagat
    23521 cgtattaaga tttaccttga cattgaaggg attacagaag gttttgaaat tattgaccca
    23581 gctcattatg atagatatga tgagatggta gctgctttgg tagagcgccg taaaggtaag
    23641 gtatcagaag agcaggcaca tgagttgttg aaagatgtta actactttgg tgttatgttg
    23701 gtatatatgg gcgtagtaga aggtatggta tctggtgcga ttcattcaac cgcttcaaca
    23761 gttcgtccag ctcttcaaat cattaaaaca gagccaggtg tatcgaaaac atcaggtgcc
    23821 ttcttgatgg taaaaggtga agagcgttat atttttggtg actgtgctat caacattgat
    23881 ccagatgctc aaaccctggc agaaatcgct atcaactcag cacgtactgc taaaatgttt
    23941 ggtattgatc caaaagttgc aatgctcagc tattcaacaa aaggctctgg tgctggtcct
    24001 aaagtagata aggttgttga agctacaaaa attgctcaaa aattgcgtcc ggagttggat
    24061 ttggacggtg aattgcaatt tgatgctgcc tttgttccta ccacaggtaa attaaaagca
    24121 ccaggttcga gtgttgctgg tcaagcgact gtatttatct tcccaggtat ctcagctggt
    24181 aatattggtt ataaaattgc cgaacgtatg ggaggatttg cagcggtagg tcctgtttta
    24241 caaggtttga atcagcctgt aaacgacttg tctcgtggtt gtaaccctga tgatgtttac
    24301 aacttgacct tgattactgc ggttcaggct ttggagcacc gttaatatga aatttttatc
    24361 acgatatttt aaggactata ttaaggaatc catattaggt ccagttttta aactattgga
    24421 agcttgtttt gagcttttgg taccattaat tatcgcctat atcgttgata caattattcc
    24481 aaatggcagc cagggaaacc tggttgctat gcttttttta ctggttggta tagcatgtat
    24541 tggaattatt gtttcactaa tagcgcaata ttattcagct aaagcagcgg ttggagtgac
    24601 taaagagctg acgaatgact tgtatcagaa ggttctttcc cttcccaagt ctagccgaga
    24661 tattctttcc tcatccagtt tgctgacacg attgaccagt gacactttac aaattcaaac
    24721 gggtattaat acttttcttc gtttgttttt acgtgctcca attgtcgtat ttggttcgct
    24781 catcatggca ttctatatta gcccaagtct atctgcctat tttctaggaa tgattatcct
    24841 attgattttt atagtgacag tcatttctgt tatgaccagc cgtatttatc aatcgatgcg
    24901 aaaagaatta gatggtttgg tggggcaggt acgtgagaca gtgactggtt ggcgagtgat
    24961 tcgtgcattt ggacaaagag agcgagaaat taaggctttt caaggcataa atcagattta
    25021 taagaagcaa cagttgcagg ctggtttttg gtctagtctt ttatcaccat taacattttt
    25081 agtggtcaat ggcaccttgc tcattctcat ctggcaggga aatatagcca tttcacacaa
    25141 tttgttggaa caggggatgt tggtcgctct tatcaactac cttcttcaaa ttttagtcga
    25201 attggtcaag atgattttgg tcgtgtctac tctcaaccag acctatattt cagcgcaacg
    25261 tattcaagag gtttttgacc aaacatctga ggatgtagag tctagtttgc caagagtggt
    25321 tagtgaggat aaggaaatca tcttttctgt gcgtcatctt tccttttctt atccaaaatc
    25381 tgctgaggag tccctgtctg acattgcttt tgacttacgt aagggacagt ttatgggaat
    25441 tatcggggga actgggtcag gtaagtccac cctagtagat ttattgcagg cactctattc
    25501 agtgccaaca aatcagctct ctctcttcat tgatggaaaa agtcctaaga atttaaaaga
    25561 gtggcggcag caaattgcca tcgttccgca acaggctcag ctttttgctg gaactattcg
    25621 ttctaattta tctttaggat tggaagaaat atctgatagt gacctatggt ctgctttaga
    25681 aattgcacag gctaaatctt tcatagagga taaaggtggt ttggatagcc ctgtcgaagc
    25741 ctttgggaag aatttttctg gtggacagcg tcaacgtttg accattgcac gcgctgtttt
    25801 acagaaagca ccgattttaa tcttagatga tgcgacctct gctctggatt atttgacgga
    25861 gagtcgatta ttagctgcta ttcgccagga attaccaggt cagaacttaa tcatggtgtc
    25921 acaaagaacc aatagtttac ggacagctaa tcagatttta gtcttggaac aagggcgtca
    25981 agttggactt ggtcgccatg aggacttgct gagaagctct gctatttatc aagaaattca
    26041 ccaatcgcaa caacaaggag aggaggatag ctatgagaca atctagtttt aaggaactgg
    26101 tcagattggt tttacaccag ccccttcgaa tgtccttgat gttggtggga actttggtgc
    26161 aagtccttct gacagtttat ctgcctatct tgattggtca ggcagtcgat gcagtattga
    26221 tagcaaatgg tcaggtcttg ctcggtatct taggcaaaat ggtgatggtt atcttgctta
    26281 atacgctgat gcaatggtac ttacctttgg taaccaatcg cttggtttat ggaatggtgg
    26341 ccgacttgcg tgaacaggtt tatgttaagc tacaccagat gcccctatct tatctggatc
    26401 gtcaatcagt cggtgatttg gtggctcgtt tttcaagtga tagtgagcaa ttaacaaatg
    26461 gtctcttgat gattttcaat caatttttca ttggtatctt gaccattttc ctaaccattt
    26521 tcactatggc taggcttgac ttgaccatga tgttggttgt tgttgccctg actccagttt
    26581 ctctgcttgt ggcacgctat atcgctaaga aatcctatgg ttattataga caacagactc
    26641 aggcacgtgg gaagcaatct cagcttttgg aagagtccat cagtcaattg acactggttc
    26701 aatctttcaa tgctcaagag caatttacgc aaggttttca agttgtgaat gaccagtatg
    26761 cgacctattc tcaacaggct atctttgcct cttcaacggt caatccaagt acgcggttta
    26821 tcaatgctat tatttatgcc ttacttgcag gacttggagc gctgagaatt atggcaggaa
    26881 attttacagt gggatccctg acaaccttcc tcaattatgc tagtcagtac agcaagcctt
    26941 ttaatgatat ttcctcggtc ctatcggaat tgcagagcgc cttagcttgt gcagacaggc
    27001 tgtttgctat cttggatcta gatagcattg acgatcaggc tgagcggaaa attgattcag
    27061 aggagttgaa gggagctatt tcctttgata atgtgtcttt ctcctatagc cctgaccgtt
    27121 ctctgataga acatctggac attgatgtca aagctggaca aaaggtagcc attgttggac
    27181 ctactggtgc tggtaaatcc accatgatca atcttctcat gcgtttctac gatgtgacgg
    27241 ctggtcagat tgtcttagat ggggttccga ttagccagta cagtcgtgag gatctccgca
    27301 gacagattgg gatggtttta caggagacat ggatcaaatc tggtaccatt catgataata
    27361 ttgcctatgg ctatccaaat gccacgcggg aattggtcat tgaggcggct aaggcagcta
    27421 atgcagactt ctttattcgt cagcttccac agggttacga tacggttttg gcagatggag
    27481 gagaaggctt atcccaggga caacgtcagc ttttgtctat tgcgcgtgtc tttgtcaaga
    27541 tacctaaaat cctgatttta gatgaggcga cttcctctat tgatacacgg acagaaattt
    27601 tagtacagga agcatttgcc aaattgatgg aaggacggac cagttttatt attgctcatc
    27661 gcctatcaac cattcaatca gctgacttga ttttggtcat ggtggatgga aaaattgttg
    27721 aacaagggaa tcatgaagcg ttgatggctg aacaaggcgt ttattatcaa atgcaaacaa
    27781 gtcagcagac agaggaggat gaaagtgtta gataaattaa acttacaacc gattacggtt
    27841 ttagatgact atcaagctac aatgctcaat gagaaagagg tgctactgac tacaaaggtg
    27901 acggaaaaat ctctcaatcc atacggtatg gcacatggag gctttctttt cacattggca
    27961 gattcagttg caggtctgac aacggtagca aggggttctt attctgtcac cctacagtcc
    28021 aatatccatt atatgaaggc agctaaactt ggtgatacct tatcagtaat aggctcttgc
    28081 acacatgatg gaagtagaac aaaggtcgtt gaagtgaaga tagaaaacca agataaacag
    28141 ctacttgctt cagcaagttt taccatgttt gtaacaggaa aagtagaata atactcaacg
    28201 aacatcaaaa acagacagtc ttggctagat ttagagaaac aaattcgttt gctttatttc
    28261 ctatctccca agtttcccca aacctttgga gctagtttga ttttgattat aaacgatata
    28321 agggagttgg caaaagctgg ctccctttct ttgtgttata ctagatgtat gttaaatttg
    28381 aaagaatatg gaatcgaaat gtggccggag gaaaagattc aagcttttcg caaggcactc
    28441 ttagattggt atgatgccaa taaacgtgat ttgccttgga gacggaccaa ggatccgtat
    28501 gctatatggg tttctgaaat catgcttcaa cagacaagag tagacacggt cattccttat
    28561 tatgaacgtt ttctctatca cttgcctacg attagtgatt tagcacaagc accagaggag
    28621 gtcattctca aactctggga gggattgggc tattattcgc gcgtgcggaa tatgcaaaag
    28681 gcggctcagc aaatggtaga agattttgat gggcaatttc cgaccacgca tgcagccatt
    28741 tcaagcctaa agggcattgg tccctatact gctggagcaa tttccagtat tgcttttaat
    28801 ttgccagaac cagcggtaga tggcaatgtg atgcgggttc tcagccgctt gtttgaggtt
    28861 gattatgaca ttggtcttcc tgccaatcgt aagattttcc aagcgatgat ggagctattg
    28921 attgatccag agcgaccggg cgatttcaac caagccctga tggatctggg gtcggatatt
    28981 gaatcgccag ttaatccacg tccccaggac agcccagtca aagcctttag cgcagcctac
    29041 ttaaacggta caatggataa gtatccaatc aaagcaccaa agaaaaagcc gatttccgtg
    29101 gcctaccagg gatttctcat cagaaataaa gacaatcaat ttttattgga aaaaaataat
    29161 gaagcaggtc ttctatcagg tttttggtct tttccgcttt tggaaaaagg agcaatcgtt
    29221 gacaaacaag tctctctttt tgaagttgca gaagaagttg ttcagccaga tattcggcag
    29281 agctttacgg aactttatgg tctggctgtt gattggcaag agcaagaatt tggcatcgtc
    29341 cagcacattt ttagtcaccg caaatggcag atagaaatgg tagaaggtgt ggcagaaaca
    29401 cttaaccttc cagaatcaaa agaattgaaa tgggtttctg tagaagattt tcctacctac
    29461 ccatttgcta agccgcaaca aaaaatgtgg gaaaacttta tcaaggaaaa agaaaagcaa
    29521 aaaagttgac tttggagcac ataattattt gaaagcgttt tataatagtg gtataatcta
    29581 attgaaaaaa ggaaatagtt agttaagatg ttgaacgcca tctgaattgt tgaaaggagt
    29641 tctttagcgt tcgtagaagt gtatatacta ttagccatct ttctctaata aaaagagagg
    29701 gatgctagta ggggaaaagt ccgttatccc tgttttatat ctatttgtga tatccattgt
    29761 caaatgcgta gcataactta caattagcct tgctacccgg ttcaatcaga agtaggctaa
    29821 gattattcgt gtcgtaacta ctatgtgttc aagatgttgt aacttttgaa cataacctta
    29881 gaaaatcaca aaaacctata gagaaaatca caaaaacctc tagcgatttt catcataata
    29941 agcaatctcc acactttaga caaatagtaa gaggacaatc aaagacataa gggtagcaga
    30001 ataattattt aatcattaac ttgttgtcaa ataactatct ggtaatggac ttttccaatt
    30061 tgacatataa aagggaggct gtcatagcct ccttttactg tgcttttcag tttgttttca
    30121 gtaggaaaaa acgccagcta tacgaacaga ctttccaaaa ctagatggat gaatgtagcc
    30181 aatataacta gtgattaact aggcttagaa atcaatctgg actataaata tctacaactt
    30241 gaccaatagg tcgaatatcg tcttctgggc taaaatagat atcatcatag tctggattta
    30301 aggattgtag gtagttacct ttgaatttct taacaaaatt ttctccgttt actgaaaaaa
    30361 ttccaattgt atttagagga atatgaggag ctaggcgaat gaagagatag tctccatcct
    30421 cgatatgcgg agccatagaa tctcccacaa cctgagcgat tgtatcataa gattggttat
    30481 ctggaatctc atcgttatag aatgatacaa gattgttcat atctgtatcc tgccagtaac
    30541 ctgtaccggc agaaacctta ccaggaacag gtaattcgat ttgctcccga tagtcatcca
    30601 agtgaagaat agaagcagaa ggagtaactg aggtagtttg catagctgct aactgttctt
    30661 gaccaaaagt taaccattgt gcatggaaat caccttttaa ttcattgtcc aaggtttgaa
    30721 cctctggatg aataggctgt tgaaagagtt taaactggga aggagtaatc gttaaagcaa
    30781 tatcctgatt agaatctagt tgctcgatta gctcaccaac cgatatagcc atgcccttag
    30841 cgactttttc tagcgtatcc atcgttggca ggagagcttt tttagttttg ggatgctggt
    30901 tcttttccaa gatagaaata taaccttttg ttaaaccaga taattcagcg aatttatcca
    30961 ttgataattt attcttgctt cggtattctt ttaaaatatc acctaaaatc atggttgtct
    31021 ccttatctgt ttaactaatt ataccattaa aaaatatttt ttgcaaattt tgtttaacgt
    31081 gtttgacaaa aaatcaaaac ggtgttatga taatctcaca aaaagaaaaa taggagtcgc
    31141 aaatgaaaag gatgacagag atttcttgga atgatattta taaagagtgg gaaacctatg
    31201 ctaatcattt tggtttgacg actccgataa atactgaaaa attgcgagat cagaaatcga
    31261 aggattttgg aaaaggaagt ctgattacgc tggacttatt agccgattac gatactgatt
    31321 ctgagaagac cgcagctatt tgggtagctt cattttgtag agatttaata caagattacg
    31381 catatttact aaatggtaga gcctatctta cagtcaatca gatttatttt caggcactca
    31441 aacaatttca gtcagaagcg gtaatatggt caaaacctct cacacgatta caaccgaagt
    31501 tatttgtatc ttatcgtttg ttggaaaatc ttgatttgag tcattattct tgtgtagttg
    31561 agttagcaat gttgcaggct agtctggttc ggacacagat attagaaaag taattatagt
    31621 aggagaatga aaatgtttaa tttgttgaat aagaaagctg aagtatcgaa agttgcagag
    31681 tattggaatg atactttgat agaaagagga attttgagcg cggatgaatt gcttgaagga
    31741 aaatgctgga gatgtaaaag ttctcatggt gtagctgtgt gtcagattgt atcaagtaaa
    31801 tggagcaagg atacgagcct ggctaatcag atggtcctct gtctatcctg tcagcatgaa
    31861 aaacctgatg tagctgatac agaaattgtg tggcaatggt tagaagttga gaataatgaa
    31921 cgttactgga ctctacaagg tatggcagaa tatgagaaaa tgtataaaaa atcagtactt
    31981 caagagttat gggatatggg aattagagat ggtgaagaag tcgagacgct tgtaaataaa
    32041 gtaactagcc tttctcgtaa gaatgatatt gttttaaata gagcaacctt agcaggatta
    32101 tttcgctgtg aaatcgaaca aatgcgtcga aaggcatttc taaattggac aggaatgttt
    32161 aagctagtca gttaaccgat acagttgtag gaaaacatct catgctgatt ggagtaacag
    32221 ataaataaaa agcgcatcag cttagaatct taaagaaaga agtctaatga tgcgtttata
    32281 ggattatatt tcagctaata aaaattggag tgaatgtttt tgaattatag ttcaaaaacg
    32341 ttaatcaaaa ccttattata ccaacgatta tggcgctttt ttggtgccag ttggtgttaa
    32401 ttataatgat aagtcgttta agagacttaa agcatcggca tcttgctggt gctttttttc
    32461 tggtatcaat tctagataat actgttgtgt tgttaagata gagttatgac ctagacgacg
    32521 agaaatatag tctaggctaa tatcttttga aaagagaaat gaggcatgcg tgtcacgaag
    32581 tccatgaaat gtcgtttttg ttaatcccaa ctgttttaac agcttttgaa gttgactagc
    32641 ttgcttgaat ccattccaat caaagatata gccttctttt gtttgtgcaa gttttgtcac
    32701 agcttgataa acaccttcgt tgatggaaat atcacgctta gaatgtttgg ttttaagctg
    32761 ggtatcgtca ttagttggac taattgatcg aagaattttg ataccatatt caaaaatatc
    32821 ttctttttta attcctaaaa gttctccacg ccttgctcct gtctcaaggg cgagagcaac
    32881 aagaacatta aattcatcct cagtatgact taggcagtat tgtctgagtt tttttaattt
    32941 tgtgatagat agtatatttc gtttaggttg ttcttgtcct tttgatttca aaagatgacc
    33001 aaagtcatta ctaatcaaac cacgagcata cgcatatttc aatgaaccac ggattttaag
    33061 aacaagttct tttactgttt ttttagagtg agtttcagcg tattggtcga ttttcttttg
    33121 catgatgaga tcgtcaagat gtttaagttg aataccatca aaaaggtcat caactattac
    33181 gagagttcgt ttatagttaa taaaggtggc ttcgcgaacg tcagttttct tgaccgtatg
    33241 gacccaattt ctataaaaat caggaaatag ggtggagcgt tcggcaatgt ttttgccacg
    33301 acctttttca agttccattt ctaatgtcca aagctcagca tcttttctgt tgctaaaggt
    33361 tttagtttct cgtttatatt ttcctttctt ataaagtgat acagttgcac ggtaagagtt
    33421 accacgtttt gttattgttg ccattttatc agcctttcta taaaaaatga ttgataaaat
    33481 agactagtca catataggat atatgaaaaa tctaatttta tcaatcatta tccgtcaatc
    33541 gcagtggctt tcaataaatt taaccagttt tgacttcaaa tagcgctctt gttttcccac
    33601 cataaagcat tgaaagtctg ggtgacttct gatgtactta tcaaatgatt taggatctat
    33661 tccaagtagt tccgctgctt gttgtctatt taacagaaga ggagaattat tttgaggtaa
    33721 catatagaat tcctttcatt ttctagatac aagtattatg ccacatgcgt aatgaattga
    33781 ggctagattt ttgaaaattg ttcaatgtta cctaacgttt caataaaata taagcgtagg
    33841 aacgaggaaa ttcctctggt ctattgtgtc ccagagcctt tgttacaatt ttacaagctt
    33901 ttctgtcgag tgagatgtca actaactctt tacgcagatg gataacttct ttacgatttc
    33961 taatcttgga aatttcgcgt gctacactgc gataaacacg ctctgcatac tctgcaggat
    34021 atttgtgtga ctttaatgct gttggaactt tctttccatc aaaatcgtcg aggattaaat
    34081 ctttgggaac atgaaagact ttcttttctc ctgctcgttg gaaaatagcg actaaccact
    34141 cttcctcctc ttgactagtg gccatgattg gagaccagcg atctctgcgt tcttttgtgt
    34201 gatgcttatg gccggctaaa tttaaatacc aacggccatc acggccgcgt tgcagagcat
    34261 cgccagtgac gtggatcaat tcacttttgc gtaagcctgt cgcggtaact actttatgcc
    34321 agtagtcgtt atttttgttg gataaacgat agtctttatg caatacacga ttgttcatac
    34381 gattcgcacg agtacgtggt tgtgtagcga tgaaattagt tgaggaaact ccgagaactt
    34441 tggccaatgc tactttgtag gtcgcttgtg tatatggact taaaccaatc tctatacaat
    34501 attgtaagta ttgattgaca agttctatcc aaccttccgt atctttttca acattaccta
    34561 atgccattaa ctgttctggc gaaatgttaa ttgaaaccca ttttgcaaaa caatgctatg
    34621 aacctgaata gttatggagt gtacgatgag tgtggattaa ctcaatgctt tcttttttcc
    34681 ttgcagtcgg ttctaacgaa ccgatgtttt gcgaaccgcg caaaacctgc tcgcgaagat
    34741 tgctagcata ataaagttgt aattatcatt taaaataatg tttaaaattc caacatattc
    34801 ttgtttattt ttgatataat gtaaaaaaac aacaaaggat taaacatgaa taaacgagaa
    34861 cgactagaag aaattacacg attggtaaac aaaaaaggca cagttcgaat ttctgagatt
    34921 gttgaattgc taaatgttac tgatatgact gttcgacgtg attttattga attggaagag
    34981 caaggtgtct taacaaaaat tcacggcggt gctagaagta ataaggcttt tcaatatcgg
    35041 gaatattccc attctgagaa acacattcag aataaggaag ccaagcaaga gatagcagaa
    35101 agggctgccc aactgataga agatggagac acggtgttct taggcccagg aacaacagtg
    35161 gcctttctgg ctgaggccat taaaaatcct cgcctaacag tcatcacaaa ctgtatgcct
    35221 gtttttacca tcctatctca aaaaaagacc gaggagtttc aagtctttct cttgggggga
    35281 gaatatcgcc aagtgacaga atcttttgta ggagaaatta ccaatacaag tttagaaaaa
    35341 atgcgattca gcaagatttt cttttcaggt aacggactta agggaactga tgtcatgacc
    35401 tccaccctag ctgaagccta tacgcaaaat attgccatta aacattcgtt agaaaaatat
    35461 ctactgctag atgcctcaaa aattggaaaa gatgatttta cttctttttg tgatttgaat
    35521 gatgtaactg ctctagtgac agatatgaat gcaaaggatg aaaattacca attattaagt
    35581 aagcacatcg aaattatcac tacaaaatca taaagttatc aaaaccaaca gcaaaatgtt
    35641 ggttttttgt ttttatacga aaaaaataaa caaaaatgaa acaaaatatg ttgactttgt
    35701 ggttgtttgg ttgtataatt taaacataaa aagcgaaaac gctttttcta agttttgcaa
    35761 aacaaagatt ttctgccaaa tatggctaca actttctatt tttgttagga gataggttat
    35821 gacaatcatt atcggtgctg atccagcggg ttcaaaacta aaagacatta ttaaagatta
    35881 tttgctagaa aaatcatatg actttaaaga tgttagtgat ggaagtgatt ttgttgatac
    35941 aactttggca gtagttgcag aagttaatca acaggaagga aatcttggca ttgtgattga
    36001 tgcttatggt gttggtccat ttatgaccgc aactaaagtc aaaggcatga ttgctgcaga
    36061 agtttcagac gaacgttctg cctatatgac aagaggacac aacaattcgc gtattattac
    36121 aatcggtagt gagattgtag gagaaggaat tgctaaaaat atcgttaaag gatttgttga
    36181 aggtgagtat gatggcggcc gtcaccaaat tcgtgtcgat atgctaaata aaatgtgcta
    36241 attgttgtaa acaaaggaga ataagagatg aaaattgcaa tcggttgtga ccacattgta
    36301 acctatgaaa aaatcgctgt ggtagattat ttgaaaaatc aaggatatga agtgttggac
    36361 tttgggactt atgacaatgt tcgtactcat tacccaatct ttggtaaaaa agttggtgaa
    36421 gctgttgcaa gcggacaagc agatttggga atttgtattt gtggaacagg tgttggaatc
    36481 aacaatgctg taaacaaggt acctggcgtt cgatcagccc tggttcgtga tatgacctct
    36541 gcactctatg caaaagaaga gttaaatgcc aacgtcattg gttttggagg aaagattaca
    36601 ggtgagttgc tcatgtgcga catcattgaa gccttcatta aagcagaata caaaccaact
    36661 gaagcaaaca aacgtttgat tgaaaagatt gctgcagttg aaacgctcaa tcaagagcag
    36721 gctaatccag agttctttac ggaatttctt gataagtggg agtgtggaga ataccacgac
    36781 taggaggctc acatgatttt gacaatcact ttaaatccgt ccgttgatat tgcctatcaa
    36841 ctggatacct ttcatttgga tacggtcaat cgagtagaaa acgttcaaaa aacagctgga
    36901 ggcaaggggc tcaatgtcac acgagttttg aaacaaatcg gtgaagatgt tgtagcaaca
    36961 ggctttattg gcggtgagat tggaagttat gtaaagaaac aactcactcg aaatgatgtt
    37021 aaaaactcct ttgtggaaat tgggagcgaa acacgtaact gtattgcggt tcttcatgat
    37081 ggcaaacaga cggagatttt agaacaaggc ccaactattc aagaacatga agccttgaat
    37141 tttatcgaac accttgaaat cgtcctgaac aatgtagatg tagttgttat ttcaggaagt
    37201 ttgcctaagg gacttgctag caattattat gttcagcttg tagagctttg taaaaaattt
    37261 ggcatagctg ttgttttgga ttgttctggt gaggcgctga aaaacgtttt agaaagccag
    37321 cagaagccga cagttattaa gccgaataca gaagagttat cacaactgat tggtaaagaa
    37381 gttactgatg atattcaaga gttgaaatca gttttgtctg gtcaactttt ccaaggaatt
    37441 gattggatag tcgtctcatt aggggcacag ggggcttttg ccaagcacaa tgacaagttc
    37501 tatcgtgtca gaattccaaa aatcaaagtc gtcaatccag taggatcagg agattcaact
    37561 gttgcaggta ttgcagcagg tttggtacac gctttacctg atgcagaatt actaaaaaat
    37621 gctaatgttt taggcatgtt aaatgcccag gaagaacaga cgggttacgt caatttagaa
    37681 aatgcagaat cgttgtattc tcaaatcgaa gtcgaagagg tataatatgg tagtaacagc
    37741 agacaaaaga aaatacatgg aaaaagtaag caatgaagca ggtattattt cagctttagc
    37801 tttcgaccaa cgtggagccc tgaaaaaaat gatggcaaaa catcaggcag aagaacctac
    37861 tgtggaacag atggaagaac taaaaactct agtttctgaa gaattaacac agttttcttc
    37921 ctcaattctg ttagatcctg aatttggttt gccagcatca cgggcccgtg acgagcagtg
    37981 cggtttgctt ttggcttatg aaaaaactgg ctatgatacc agctctacta gtcgcttacc
    38041 agattgccta gtagagtggt ctgtgaaacg actaaaagaa gaaggtgcag atgccattaa
    38101 attcctactc tattatgatg tggatggaga ttcatacgtc aatcttcaaa aacaggccta
    38161 tattgaacga ttgggttcag aatgtcaggc tgaaggttta ccattcttct tggaaatttt
    38221 gagctatgat gaaacgattg aagacaatgc cagtgtggaa tttgcaaaag tcaaacctcg
    38281 aaaagtaaat gaggctatga gagttttttc ggatgaacga tttggagtgg atgttctcaa
    38341 ggtagaagta cctgtgaata tgaattttgt agaaggcttt ggaacaggag aagtcgtcta
    38401 tacaaaagaa gaagcagctg aatatttccg tcaacaagaa gcatcaactc atttgcctta
    38461 tatttatcta agtgcaggtg tttctgcaaa actcttccaa gatactctag tgtttgcaca
    38521 tgaagcaggt gctaaattta acggtgttct ttgcggtcgt gcaacatggg caggtgttgt
    38581 gccagtctat attgaacaag gtgaagaagc tgcgcgtgaa tggttacgta ctgttggtcg
    38641 tgaaaatatt gagggacttg atgcagtctt gtctcaaaca gcaacttctt ggctagaaaa
    38701 ataattgaaa aaataaccat tttcttaaaa gaaagggttt acattttctg agaatatgct
    38761 ataataatct catcagcaag aatagagtgg attgtaacta attcgattag gcaagactac
    38821 aaatggattt gagagtagga tattctcggt ttgtttgtag tctttttttg cttaaaaata
    38881 taggagggat atatgtttag gattatacag tcactaaata ataacgctgc cctggtgaaa
    38941 aatgaacatg gggaacaggc agtcgtgatg ggattaggta taacctttca aaagaagaaa
    39001 ggggatttaa ttgttaagga caagatagaa aatatttttt cgctaaaaaa tgatgaagct
    39061 aaagaaaatt ttctaacctt attaaaagat atacccttag attttatttc ggcaacctac
    39121 acggtgatta atcatctggt agaaacttat cattaccctg tacaagaata tctatatgtg
    39181 acattgacag atcatatcta ttgtgcatat caggcggttt taaagaatgc ttaccaagaa
    39241 agtaagctac ccaatatttc agccgaatat ccattggaat ataaaatggc gcgcgaagcc
    39301 ttagctatgt ttcgtgaaaa gttgctaaat gattttccaa atgatgagac tggtaaaatt
    39361 gcacttcact taatcaatgc aaagggtgaa acaattcatc ccacaagtga agaacatgac
    39421 atcagtaaga aaattattgc tgaggttgaa caaattttga tagagaatgg gattaaacgc
    39481 tctaaagaaa atagcaattt ttatgatcgc tttatgattc atttgtccta ttttctgaat
    39541 tacttagata gatcccatca gtcaaatgaa tcgattgcta gtttggaaca gtacattaag
    39601 ctccagaatc caagagccca tcaggttgga agtcagattt ttgagatgat tacatcattg
    39661 gttgatgagc cagtaaatga tagtgaaagg ttctatattg tactacatat tcaacggtta
    39721 ttgtaaatca tactcttcgt aaatccaatt cagacgttgt tgccttaact tgatgagtga
    39781 aaagctccag tggaggtttt cagcctgttc cattgagatg agaggggaac agagttctac
    39841 ctacgttttc gtcgcctagt ctgaatggta tttccattga gtacataaaa aataggaggt
    39901 tcatgttatg aacagagaag aaattacttt attaggtttt gagattgttg cattcgctgg
    39961 tgatgctcgt tctcgtttga tggaggcact ggctgctgct caaaaaggtg attacgcaaa
    40021 agcagaagaa ctagttgaag ctgccaatgc ttgtattgtt gaagcccacc atgctcagac
    40081 aagtttgttg cagaaagaag cggctggtga ggatttagcc tttagtgtga cgctcatgca
    40141 tggccaagac catctcatga cgacattatt attgaaagat atgatgagcc atatgattga
    40201 actttacaaa cgaggtgata agtaatgaat aaattgattg aattcattga gaaagggaag
    40261 cctttctttg aaaagatttc gagaaaccct tatttaaggg ctatccgtga tggttttatc
    40321 gctgccatgc cggttatctt gttctcaact ctctttctaa tggtagcatt tgtacctaat
    40381 atctttggat ttacttggtc tgatgaagca gttgcggcta tcatgaaacc ttacggttat
    40441 acaatgggta ttgtagctgt cttagttgca ggaacgaccg caaaatcttt gacagatgcg
    40501 tttaaccgtc aattgccaaa aaccaatcag attaacttca tttcaaccat gattgcctca
    40561 atttcaggtt tcttattact ggcttctgat ggtattgaag gtggatttgc caatggttac
    40621 atgggaacta agggactttt gacagccttt ctggcagctt tcattacggt taatatctat
    40681 aaggtctgtg tgaaaaacaa tgttaccatt cgtatgccag acgaagttcc accgaacgta
    40741 tcccaggcat ttaaagatgt gattccatat gcattgtcta tctttgtctt gtatggaatt
    40801 gatcttgtga cacgtcaatt ccttggaaca aacgttgctg aggcgatcct gaaattattt
    40861 gagcctctat ttacagccgc agatggttat gttggtatta caattatctt tggtgcctat
    40921 gctttgttct ggtttgtagg gattcatggt ccatctattg tggaaccagc aattgcagcc
    40981 attacttatg ccaatattga aaccaacttc cagcttttac aggcgggtca acatgcggac
    41041 aaaatcctga cttcaggtac tcaaatgttt atcgtgacaa tgggtggtac aggtgctacc
    41101 ttggttgtgc cattcatgtt tatgtggttg actaagtcta aacgaaataa agcaattgga
    41161 cgtgcttcag ttgttccaac attctttggt gtaaacgaac cgatcttgtt cggtgcacca
    41221 cttgtactca acccagtatt ttttgttcca ttcatcttag ctccaattgc taacgtatgg
    41281 attttcaaat tctttgttga tacgttaaaa atgaacagtt tcagcgtcaa cttagcatgg
    41341 acaactccag gaccattggg gattgtaatg ggaacaaact ttgctccact tgcctttgca
    41401 ctagcaatct tgttggtatt tgtagatgta cttatctatt atccattctt gaaagtttac
    41461 gatgagcaaa ttcttgctga agaacaatca gggaaagttg aaaatagctt gaaagagaaa
    41521 gtggcggcta actttaatac tgcccaagcg gatgctattc ttgaaaaagc tgcagtcgac
    41581 accgaaattt ctgaacaaac caatgttttg gtactttgtg cagggggtgg tacaagtgga
    41641 ttgcttgcca acgctctaac taaagctgca aaagaatatg gtgttccagt tacagctaca
    41701 gcaggaagct atggggcaca ccgtgagatt ttgccagagt atcaattagt tatccttgca
    41761 cctcaagtag catcaaacta cgatgacatt aaacaagaaa ccgatgcatt gggcattaaa
    41821 cttgccaaaa ctgagggggc tcaatacatt aaactcacac gtgatggtca aggtgctctt
    41881 gactttgtca aacaacagtt ttaatcaaag ggggtgggag tgaaatcttc aactcctacc
    41941 cctatattta tttttgatag aagaaggtag gcatatggtt aaaacattac cgaaagattt
    42001 tatatttggt ggagcaactg ctgcatatca agcagagggt gctacacaga cggatggaaa
    42061 aggtcgtgtt gcgtgggaca agtatctaga agataattac tggtacactg cggaacctgc
    42121 ttctgatttt tataatcgtt atccagttga tttagaacta agtgaacagt ttggtgtgaa
    42181 tggcattcgg atttcaattg cgtggtctcg tattttccca acaggctttg gagcagtgaa
    42241 tccaaaggga gtagagtatt accataaatt atttgcggaa tgccataaac gtcacgtaga
    42301 accatttgta acgcttcacc attttgatac accagaaacg ctacattcta atggtgactt
    42361 tctaaatcgt gataacattg agcactttgt caattacgca gcgttttgct tcaaagaatt
    42421 ccctgaagtt aattactgga caacctttaa cgaaatcggt ccaattggtg atggacagta
    42481 tcttgtaggt aagttcccac cagggattca gtatgactta gctaaggtat tccaatctca
    42541 ccacaatatg atggtttcac atgccaaggc agttaagctc tacaaggatg ctggttatag
    42601 tggagaaatt ggtgttgtac acgcattgcc aacgaaatat ccttatgatc caagcaaccc
    42661 tgacgatgta cgtgcagcgg aactagaaga tattattcat aataaattta tcctagatgc
    42721 aacatacttg ggttactatt ctgaaaaaac gcttgaaggt gttcgacata ttctgaaagt
    42781 aaatggcggg gaattagacc ttcgagatga agacttcgct gccttagatg ccgcaaaaga
    42841 tttgaacgac ttcttgggca tcaattacta tatgagtgat tggatgaggg ctcatgatgg
    42901 agaaactgag attatccata atggtaaagg ggaaaaggga agttctaagt atcaaatcaa
    42961 aggagtcggt cgtagagagt ctccagttga tattccaaaa acggactggg attggattat
    43021 ctatccgcaa ggcctttatg atcaaatcat gcgtgtgaaa aatgactatc caaactataa
    43081 gaaaatctac atcactgaaa acggcctagg ctataaagat gagtttgtag atggtacagt
    43141 ctatgacgat ggtcgaatcg actacgtgaa aaagcatcta gaagtgattt cagatgccat
    43201 ctcagatggt gccaacgtta aaggttattt tatctggtcc ttgatggatg tattttcttg
    43261 gtcaaatgga tacgagaaac gatatggatt attctatgtt gactttgaga cccaagaacg
    43321 ttatccaaag aaaagtgctt attggtataa aaaagtagca gaaacacagg ttattgaata
    43381 aaactaatac aaggatgcct agctcaagtt agcatccttg ttttcatata agggaggtag
    43441 tttttatgtt cgaattaaaa aatgagaact taacagtaca attttctgaa ttaggtgggc
    43501 aaattatttc tattaaagac aaggatggta tcgagtatct ttggcaagga gatccgacct
    43561 attggagcgg tcaagcacca gttctatttc cgatttgtgg aagtttacga aatgattggg
    43621 ctatctatga acctgcagaa agaccgacat ttacaggcac aattccaagg catggacttg
    43681 ttcgaaaaat gctgttcaaa aatgtaagta gtaccgaaaa ctctttggaa ttttctattt
    43741 catcaaacga agaaaccgta aaaaattacc cttttgaatt tgaactttcc attaactact
    43801 cactacttgg caatacaatt cgaactgaat atcgggtgaa aaaccttgag ggacatagaa
    43861 agctacctta ctttattgga ggtcacccag gttttaattg tcccttgttg gatggtgaga
    43921 gttatgaaga ctattattta gaatttgaaa aagtagaatc ttgtacagta cctagaagtt
    43981 ttccagaaac tggcttactt gatctgcgag atcgccggcc attcttggaa aatcagaaga
    44041 ccttggactt gtcctataaa ctgtttgagc atgatgccat cacattggat caattagcat
    44101 cacgaaaggt aaccttgaaa tcaaaaaatc atcagaagaa actttcgatt gcatttgatg
    44161 attttccata tttagtgatt tggtcaacta caaatcagag tccctttatc gcattagaac
    44221 catggagcgg actctctaca tcactggaag aatctgacat attcaatgcc aaacgaaata
    44281 ttagttacgt cgctccaaaa gaggttgata aaaaacattt tgatattatt attgagtaaa
    44341 taccatagtt aagtaattta aatattctac ggaaatcact caaaaactcc actggctgaa
    44401 tataagtcag tggggtttat tgcttaattt aatattatga aaaattaaat taagtgttga
    44461 aggggttcag ctgtattttg agaaatcttt atcaatgaat taattacaag atgataaagc
    44521 gatacaaaaa tcgtagtaga tgtattccta tggggtatga tatacttagt gagagaggac
    44581 attacatatg cttgtaatct cgaaaatatt tttaagcaga atgaattatc aatttgagta
    44641 aaagtaagaa gatttattaa ataggtgtta gcttatgaat gattgtgatt tcaaagattt
    44701 tgtaggaaag aatttcgctg atgaattacc agatgatgac tctaaaataa tgattcattt
    44761 tcatactatg atacttgaac ttggatcaat aattgctgca cttgaaatag taaaaattgt
    44821 aaacgatgag tggcatgata gagtagtgca atcatctatt agatatgata tagtacgaaa
    44881 tgtaacatat gaatctttgt tttatagagt tgtcttcggt ataactaaaa tttttgatgt
    44941 cagagaaaaa aatggtattt ttaagattct atctaagttg agacatagta ccaaagatag
    45001 atctctttta tcaattttga gtaccattca agagggtatt gataaagaac aaaaaaatat
    45061 tgatgaaatc aaattgcttc gcgacaaaca cttggctcac ttagataaag agatggtctt
    45121 ttcaacagaa agattagaca ttggtattct atattattat tttgaggcga tagaaattaa
    45181 gtccatatat acagcttgta tcgagttata taatacttta tatggagata atcagcaaca
    45241 agtcgaactt cctaaaagag aaataatttt gaaaagattt tttcttgaag aataactcgt
    45301 attgattagt ttttttgtct tcttataccg ataaatttat aaaatacttg acctatcatt
    45361 ttgaatttga ttaataaatt atccatctat aagataaagt aggtcaaatt agtttgacct
    45421 actgatgact agtctatttt atggtgttaa ttggtgtcga ttttatccaa atcagaggat
    45481 tttagtccat tttcatggaa gtttcatttt cgtaaatgtt gatataacgg gatttgtaag
    45541 gggtgataat tcttcgtttt caatagcgaa attctctaaa aattagggag gttattcgat
    45601 gttagaaata aaacgattct cctttctaga aaatcggtaa ccgcaatgtt gacaacgata
    45661 ataagtccga tcagcttcat agagcattgc aaacatagct ccctctatgc cattgattgc
    45721 atgaccaatc ataccggctt tacgagaata tcttttttgt gttggaacgt aagtttgcag
    45781 ttttattgac ttacattttg gacatttgag cgcttgttta gtgtccatat tattaggatg
    45841 gcatctgcga tagatgctat aagagattat tagtactatg aggatagtcg gaccgatata
    45901 ttctattaag gtattcataa tcttattgta aatcgtgtcc ttattttatt caaggaaaat
    45961 gaatactatt ttttctagaa tggctgatcc tatggctata gttgttaact atacatatct
    46021 ctaatattta agtattagtc aagacggtaa aaatgaggta gaatacagaa aaagaccaaa
    46081 ggagtacctt tatgactaga gaattttcat ttgaaaccct tcaactccat gctggacaag
    46141 aagttgattc tgcttcaaaa tcacgtgctg tacccatcta tcaaaccact tcctatgttt
    46201 ttgaagatgc tcaagaagca gaagatttat ttgccttgcg taaatcaggg aatatctata
    46261 ctcgtatcac taatccgacg gtctctactt ttgaaaatcg tgtagcagct ttagagggtg
    46321 ggattggtgc cttggccact tcttcaggaa tggcagccat cacatacact attctagcat
    46381 tagcgcatgc tggtgatcac attgtggtgg caacgacact ctatggtggg acttttaacc
    46441 tattcaaaga aacccttcct cgctatggta ttacaacaag ctttgtagat attgatgact
    46501 ttgaagcggt agaagctgcg attaaagata atacaaaact ggtatttatt gaaaccttgg
    46561 gaaatcctgt tatcaatatt cctgatcttg aaaaattggc agaaattgca cacaaccacc
    46621 acatcccgct tgtttcagat aataccttcg caactccata tttgattaat gtattttctc
    46681 atggtgttga tatctcagtt cattctgcaa ccaagtttat cggcgggcat ggtacgacca
    46741 ttggcggtgt gattgtcgat agcggcaagt ttgattgggc ggcatctggt aagtttccgc
    46801 aatttgttga agaagatcca agctatcata acattagtta tactcgtgat attggtgctg
    46861 cagcatttat tgtagcagtt cgtgtacaat tgcttcgcga tacaggtgct gccctttctc
    46921 cattcaacgc cttcttgctt ttgcaagggt tagaaacctt gtctctccgt gtagagcgtc
    46981 atgtatctaa tgctgaaaaa attgttgact ttttacttag ccatcctcag gtagagtcgg
    47041 tcaattatcc atcacttcca gatagtcctt ataaggcttt ggcggataag tacctgccta
    47101 agggagttgg ctctattttc tctttccaag taaaaggcgg agcagaagaa gcccgtaagg
    47161 ttattgatag tttggaaatc ttttctaatc tagcaaacgt tgccgatgcc aaatcactag
    47221 tagttcatcc agctacaacc acgcatgctc agttagctcc ggaagattta cttgctgctg
    47281 gggtcacacc aaatcaaatc cgcctatctg ttggtcttga aaatatcaat gatttgattg
    47341 aagatttgca acttgctctt gataaattat aggttgtgaa tcgaatagca tgacttcatt
    47401 ctttatgaat aaataaaagg aaatttggcg tgtgtgtcat tttccttttt tatatctgtt
    47461 ctagttcttc cagtccattt tcagttagtc gatagattct ttgacaaact tctttcaaaa
    47521 atcgtctgtc gtgtgatacg cataccaaac cacctggata atcggcaaat agttgacgaa
    47581 tatatggctg agaagtaggc gagaagtttc gactgggttc atctaataag agaaaattga
    47641 cttgttcaag aaccattttt aacaagagta acttggcttt ttgtcccccc gaaagttcac
    47701 agatcttgtg atgaacttct tgtcgtgtaa actgcagact ggctagatgc gttaagataa
    47761 gtcgttcctg ctcacgattg ccattttcta ataaaaaatc aagtggagtt ttagactcat
    47821 caaggacttc tgtatagtgc tggggcatgt agcccaagtt tatatctgct cgttgcctga
    47881 gtttctgata gatgattttt agaaagctgg atttacctat tccattttgt ccaatgatgc
    47941 caattttctc ttgtccattt aagttgaaat ggatattttg aactaattgt cgccctccaa
    48001 tgttcaattg gaagttttct aagtgaagca cttgttttct agctggtagt ggtgaaatat
    48061 ctgagaagaa gagggaaatg gcatcttcat gaaaaggaac ttgtgtaaga ttttccttca
    48121 ttctttcata gcgtttttca cgtgataaga cattcttcat tttcttggct atgagccgtc
    48181 ctagtgtggc atcatgggtg ttgagcaagg tatgacgaac ctgtgatttt tgacgtaggt
    48241 gcttgttcat agctttgtca aattcttttt ggtcattccg agcttgctgg acctgcttct
    48301 gataagcttg atggcgcttc aatgcgtaat cctggtagcc cagttcttca accttggttt
    48361 gagcaagtgt tttcttttta acagattcta ggtgaatgat ttttgtagct gttctgctaa
    48421 gaaagtcttc atcgtgggaa acaaatagaa tggttttagg actagtaatg atatagtttt
    48481 caagccaaag taaggtatct aaatccaagt cattggacgg ctcatccaga aaaataatat
    48541 cagatggagt tgctagagat ttgattaact gaatttttaa tttttcgcca cctgacaggc
    48601 ttccaatcaa ttgttgactg gaaaatcgct cgctatcaaa ctggagttgg tcagcataga
    48661 gatagagtag gtggtaatca atgttactgc ccatatctcc gaagaagtag tcgttcaagg
    48721 ttagctctgc cattttcaat ggaagacctt ggggaatgta gactggcgag tgaaaatatc
    48781 ggtgaatgct gcctgatatg agtaggtagt cggcgacaag agttgaatcc atcaaggtta
    48841 gtaatagact agatttgcca tttccttctt ccccgatgat ggctatttta tcgccagggt
    48901 tgacaatgaa gtttaggtca tgaaccagat ttctcaaatc tttttgatgg tcgagggtta
    48961 ggtgttgagt ggctagtagc ataaggcctc ctttacaaga aaaaacacac tacctattta
    49021 gtagtgtgtc gaaatctgct caaaaagacc ctattcaagg aatagaggga acagaaaaat
    49081 ggacgcaaga aaactactaa ataagtatag aacttaaatt gagtttactt gttattgtcc
    49141 atttctcctt acctcgcata ctttatttat tttaatatag catatcgata gaatcttgtc
    49201 aatcagcgtg ctataatatt catagatttc gatagagata tatgttaaaa tgaacttatt
    49261 gtaaatgaga gaggatccga aatggcaatc actggaattg agcaagcaga tattttagaa
    49321 atagacaaac aagtccgttt acgtcggtat gatggtcagc atgattttgc ttttgaatgg
    49381 caccaagatc tagaattggt ctggctgatt gatggtgatc aagaacgtta tagtcttgac
    49441 ttgctcgatc gtatgtatga ttatttgtct aaaaatggcg aatgttactt tattgaaatt
    49501 tttgaagacg gtcagtttat cccaattggt gatgtgacgc tgtttgcaga tgattttgcc
    49561 attgccattg gagataagcg gtattgggaa aagggaatcg ggactaaggt gttacatcga
    49621 atgatcgagc gtgcaaggga tgtgggtctt gaggaaatac ttgtcgaaga aatttatgac
    49681 tggaatacgg gctcccataa actatttgag aaatgtggct ttgaagctgt tgaaaagaca
    49741 aagaaaggtt ggtcctataa gatgatattg taaattcatt tggagatacc aaaaaaacct
    49801 tgatgcaagt caaggctttt cgtttagctt agacgttcaa gaccttatca aggaagtctt
    49861 gtaaacgtgg atgttgtggg ttgtcaaaga tttgctctgg tgtaccatct tcaaggaact
    49921 caccgccatc agtgaagata acgcgattag caaccttgcg ggcaaagccc atctcgtgtg
    49981 tgacgattaa catggtcata ccttgctcag ccaagtcttt cataacgttg agtacatcgc
    50041 caaccatttc agggtcaagg gcagaagttg gttcgtcaaa gagcatgatg tctgggttca
    50101 tagcgagggc acgagcgatg gcaacacgtt gcttctgacc acctgaaagg ctgtctggca
    50161 tagcgtcgcg tttgtctgcc aatccaactt tttccaataa ttccatgccg accttttcag
    50221 cttcagactt gtccatcaat ttgtgttcga ttggcgcaaa tgtgatattg tctaggactg
    50281 acatgtgtgg gaaaaggtta aagtgctgga ataccattcc gacatttgaa cggaaggcat
    50341 caacatctgt tttaggatcg gttaagtcat atccatcgac agttacttga ccacttgtaa
    50401 tggtttcaag taagttcatt gtacgaagga aggtcgattt acctgaacca gaaggaccga
    50461 tgatacaaac aacatcgcct tcatagaact tagcagtaat acctttgagg acctcgtttt
    50521 taccataaga cttgtgtaag tcatggacgt tgatttttaa ttgagccatt atttgcctcc
    50581 tttttcgagt ttgcgtgcta agcgagtcaa gagtgtgata actaccaagt aaatgatggc
    50641 aagaattgca tacatacgga aggattggta gttacgtgca ataatgattt tacctgcttg
    50701 gaagagttcg accaaaccaa tcgcagaaat gatagtggta tctttcagag taataacaaa
    50761 ctggttgata aagttaggca acataatttt accagcttga ggtaggataa tcttacgcat
    50821 ggttgttccg taggaaatac ccaaactgcg agatgcttcc atttgaccaa caggaactgc
    50881 ctgaataccg ccacgaacaa tctcggcaat ataggcacca gagttgaggg atagggcgat
    50941 cgtaccagcg acaaagtcat tgattggaga ttgttgacca gtaatcgact cgattaagtt
    51001 tggaataccc cagaagatga atgcagcgac aatcatgagc ggaataccac gaacaacatc
    51061 tacaaagaca gatgaagtaa cacggagtgc tttaactggg ctgacagcaa acataccgaa
    51121 gataataccg atcacaattg caatagcaaa tgatagaagg gcaagtccaa ttgtgatacc
    51181 aagacctgag agtaattgac cgtagttgtt tttcaaaaga ccaacaatcg ttgtctcatc
    51241 aacagttgaa gtcgttgtgc ttgcttcttc agttgagttg aaatacttat taaggatttc
    51301 atcatacttg cctgattcaa ctagggcagc taagccgttg ttaaacattt caattaattc
    51361 tgggttggca ccttttttaa cggcaaatcc gtactcacct gatttttcgc caggaattgg
    51421 tgttgcaaag ttgcgacctt gttggatggc atatagaaga accgcttcgt catccataag
    51481 agcatcaata gaaccagagt ttaaactgtc atacatactt gaagcttcat cgaaggcttt
    51541 tagggtgtaa ccatattttg ccttgttttc ttctaagaaa ctatatgaag ctgtaccatt
    51601 tttagctcca acagttttcc cttttaagtc ttcgtaagaa gcgatgtcac taccattttt
    51661 aacagctaat aggatgtttg aagtatagta ggcgtttgag aagtcaaaga tttccttacg
    51721 agcatctgtg atagacatac cggcaataac tgcatcagct tgtccagctt gaacagcatt
    51781 tagtgcagcg tcgaaaccag ggttttgaat agtaatggta aatccttgtt gttcagcgat
    51841 tgccttgatt aattccatat cgattccgac atagttacct aattcatctt ggtattcaaa
    51901 tggagcaaaa gaagaatctg ccacaattgt gtagcttgat ttgacaggtg ttgctttagc
    51961 tgatgcgttt cctgttaagc ttaaacgaga tgagtaatct gtactttcgg cagaagtggt
    52021 agaagctcct aaccatttgt tcatgattgt ttcgtaggtg ccatctttct tcatctcagc
    52081 taaagccttg ttaaagtctt caacaagata ttcatattgg ctaccttttt ttacagagaa
    52141 accaaatgaa ccgattgctt cgccttcgat gtcaatgctt aggtcttgac cttgttggat
    52201 agcgtattga ataaccgctt cgtcgtccat gacagcatca acagcaccag cagaaaggct
    52261 attatacatc aaatcgccag tatcaaaagt ttttacgttg tatccgtact tgtctttgtt
    52321 ttcttctagg aagttttggg ctgcagtacc gtttttgaca ccgacagtct tgcctttaag
    52381 gtccttatat gaagagatgg tatttgcttt tgtggtagcg ataacgattt tggtgtcgaa
    52441 gtaagggtct gagaaagtaa atactttctt acgcgcttcg gtgatagttg tacctgccat
    52501 tagggcgtct gcagatccag cctgtacagc gtttacagct gcatcaaatc ctgggaagct
    52561 ttgagtcatg gtccaacctg agcgcttggc tacttcgttg atgatgtcaa catctaatcc
    52621 tttataaatt tgatctgagt ctttaaactc gaatggggcg taagcattgt caaatacgac
    52681 atcaatagta tcgtcagctt taacgccagt aaaaataaag aatactggca gaatgcttgc
    52741 caataacatg agtaattttt tcttcatttc catactcctt ctattataaa ataactgtcc
    52801 tagtatatca tattctgaaa attaatgcaa aattgaggtt tttataatgt cagaatttct
    52861 gacatacaaa gtcattaaaa tgtgagaaaa tttaatattt tggacatagt tgtgaatggt
    52921 ttagaatgtt tctccattag tcgaacttat gataaaatag gagtatgatc aatcgaaata
    52981 ctgaaaacca atttaaactt gtatctaaat actcaccgtc tggtgatcag ccccaagcca
    53041 ttgaaacctt ggttgataac atcgaggggg gcgaaaaagc ccagattctc atgggggcga
    53101 ctggtacggg caagacctac accatgagtc aggtcattgc ccgtgtcaat aagcccactc
    53161 tagtcatcgc ccacaacaag actctagctg gtcagcttta cagcgagttc aaggaattct
    53221 tcccagaaaa tgcggtcgaa tacttcgtat cttactatga ttactaccag ccagaggcct
    53281 atgtaccgtc tagcgatacc tatatcgaga aggacagttc ggtcaatgat gagattgaca
    53341 aactccgtca ctcagcgacg tcagctcttc tcgaacgaaa tgatgtcatc gttgtggctt
    53401 cggtttcctg tatctacggt ttgggatcgc ccaaggaata ttcagatagc gtggttagtc
    53461 tgcgacccgg ccaggagatt tcccgagacc agttgctcaa ttccttggta gatatccagt
    53521 ttgagcgcaa cgacatcgac ttccaacggg gacgcttccg tgtacgtgga gatgtggtgg
    53581 agattttccc agcttctcgt gatgaacacg ccttccgtgt ggagtttttc ggggatgaaa
    53641 ttgaccgcat tcgtgagatt gaaagcctga caggtaaggt tttgggcgat gtggaccact
    53701 tggcgatttt ccctgccacc cacttcgtga ccaacgatga ccatatggaa acggctattg
    53761 ccaagattca ggcggaactg gaagagcagc tcaaggtctt tgaggcagaa ggaaaactct
    53821 tagaagctca gcgattgaaa caacggaccg actacgacat cgagatgctt cgggaaatag
    53881 gttacaccaa cggagttgag aactattcac gacacatgga cgggcgaagc gagggcgagc
    53941 ctccgtacac actgctggac tttttccctg aagactacct gattatgatt gacgagagcc
    54001 acatgaccat ggggcagatt aaggggatgt acaatggtga ccgctcacgc aaggagatgt
    54061 tggtcaacta tggcttccgc ctcccgagtg cactggacaa tcgtccgctg cgcagggaag
    54121 aatttgagag ccatgtccac cagattgtct atgtatctgc gacgccgggt gactatgaaa
    54181 tggagcagac cgataccgtt gtcgagcaga tcattcggcc gacagggctt ctggatccag
    54241 aagtggaagt ccgtccaacc atgggccaaa tggatgacct cttgggcgaa atcaatgccc
    54301 gtgttgagaa aggtgagcgg acctttatca ctaccctgac caagaaaatg gcagaggact
    54361 tgactgacta cctgaaagaa atgggcgtca aggtcaagta tatgcactcg gatatcaaga
    54421 ccttggagcg tacggagatt attcgtgatt tgcgtttggg cgtctttgat gtcttgatag
    54481 ggattaacct cttgcgtgaa gggattgacg tgccagaagt cagtctggtt gctatcttag
    54541 acgcagacaa ggaaggcttc ctccgtaatg agcgtggact catccagaca attggtcgtg
    54601 cggcccgtaa ctctgaaggt catgtcatta tgtatgcgga caaggtcacc gagtccatgc
    54661 gcaaggctat ggacgaaaca gcccgccgcc gtcaaatcca gatggcttat aatgaagaac
    54721 atggtattat cccacaaact atcaagaagg aaatccgtga cctgattagc gtaaccaagg
    54781 ctgtcactca ggacaaggaa gaagtggtgg acttcaatgc cctcaacaaa gacgaacgca
    54841 aggctatgat caagaaactg gaaggtcaaa tgcaggaagc tgcagaagtg cttgactttg
    54901 aactggcagc ccagattcgt gatatggtca tcgagttgaa gaatatgtag taagagttgc
    54961 taagttcagt gatttaagta ggatgaaatt acaagaggcg gcaggtagaa attgacctgc
    55021 caccttttat aatacttaaa atttttactt ggggacttag ggacaaaaaa tttgtccctg
    55081 tccctataaa aggttataat ggtttctata ctatttaggg aataggggga gtttttatga
    55141 aaaatatttt ggtgaaaaac gacagcggtt cggttttcgg aaactgtcga ttggacttgt
    55201 ctcggcagct gtagcaagtt tgttttttgc gtcatcggtc gcagcagcac cgtcagctag
    55261 tgctcagtct atcaattatt cctatgtgac agagcaagaa ttgacagatg cagaaaagga
    55321 gttgattatt cgtgacttgc ctggcttagc tcaggaaacg gatgcaaatt attacctgat
    55381 ctatcgtcca gctactggca caacatctac tccatcgacg agcacgtctc aagttttgcc
    55441 aaatactggc tctgtagaaa ccggactatt ggtggcgggt ggagtgtctc ttctgttatt
    55501 ggctgttaga tttggtaaaa aaggtaagaa ggagttggca ggtgtcatcc ttttgacagc
    55561 tacgggagca agcttcttcg gtccaactag ctccgcattg acgagtcaaa ttttggctcg
    55621 atataaccat gcaatcgaaa tatctgccgg acaagcgtta ccggccccag ctgagattga
    55681 tggctacgtt tatgtaggat atttgaagga tagcaaagct attgaacaaa ctacttcgga
    55741 agaggaaaaa acagcggaat tcccagcttc agaaggaatc cgtacagaaa ctattgtcaa
    55801 caagacagag gccattccat tcgaaattca aaccgtagaa aatcctcaat tatctgcggg
    55861 gacagagcga gtggtacaag aaggacagga tggggagcgt attgtaacga ttaaacaagt
    55921 ccattcaaaa ggtcaaatta tttcggaaga agagatttcc tcgacggtta caaaaactgc
    55981 tgttccaaag attgttgaag ttggtacaaa acaagcaacc gatgatattg ttacagaagt
    56041 accagataca gaaccaagtt atgaaaactc gacgaattct ttaacagaag aaacagttac
    56101 tcataccgaa gtctttgcct ttgatgtgca agaaatctat gatgtaaact tggcagaagg
    56161 tagtcgtgaa gttgaacaga agggacaaga tggtgttcgg acaatcgaga ctaggaatta
    56221 ttatgccgat ggtgtactga ttaaatccga acaagtttca gatgtagtga caaaagaacc
    56281 agtaacagaa gttgtaagag taggcacgaa gacaacagat gttattggtt ctgaaaccat
    56341 tgtaacaaca gaagagcttc cgtttgaaac gacagtcaca gaaacagaag aactttatgt
    56401 tggggaagaa aaattcatta ctgaaggtaa ggttggttct aaggaagtta ccactactta
    56461 tcagacaatc aacggagtca gtcaaccaaa cccaacagtg actgagaaag tccttgaaga
    56521 gccaacaacg aaagaggttc tcaaaggaac aaaaccaata gaaggtacgg aaatcgaaac
    56581 taatcaagtt gaaattgcct ttgaaacaga gtatgttgat gacccgacat tgttagaagg
    56641 taagaccaaa gttgtaacgg cgggtgtaaa tggctctaag acagttacaa caacttacca
    56701 gactatcaag ggagttcgtc aggaaaatcc tactgtaaca gaagaaatca caaaacaacc
    56761 tgttaagcaa gtcattgcgc gtggtacaaa agttgagaaa gttccacaag tgattatcac
    56821 agatttggtg gaaaatgacg atgccaagtc agcgacaatc agctacaatc agctacaagt
    56881 tgacagacga aaccgctaat ttccaacgag ctgttgctct cctctatgat aatacaggtg
    56941 ccttggttca agaacagacc attacagatc caaatggcca gttgacactt gaaaatcttg
    57001 atttctacac agattacact gttaagacta agattttcta cacaatggca gagcaggaac
    57061 aaagttcgga acaagaagct attcttgaaa gcatgcgcaa atttgatttg gtctacaaga
    57121 agattgaaat caaggatatt gatgcggtga ctgtttaccg tcgtaagaat ggtagctaca
    57181 tcggtcaaga attcttggaa gaactgccag catccacaga tgaattgttt atcaaggtga
    57241 cttcagatcg cttcaaggag gtatacctac ctgtgtcaag tattgaagaa actaccttga
    57301 atggcaaggc agccttcaaa ctagtttcat cctttgatga attggtacag gataaggatg
    57361 cccaatacgt tgccaatcgt gaattctaca ttcctaagat ggcgactgat gcaaatacct
    57421 acacatcctt caaagctttg ctcgacgcta tgaaggcaaa tccaagtggt acctttaaac
    57481 taggagcgca tttggacgca agtgaagttc ctgttggaga tgttgcatcg tatgtgacca
    57541 actttagcgg gactttggat ggcttaaatg tcggctacgc cttttctatc agcaatttga
    57601 aagcaccatt gttctttaac cttggtggta aagttcaaaa cttggatatc aagaatgcca
    57661 gcctgaatac aagctctaag aacccacttg cgacaattgc gattaatgcc aatggagcaa
    57721 ctattacaaa cgtagcagta gaagcatcta tcaaaggtcc acaaaacgta tcaggtctgg
    57781 ttcattctgc aaccaactct actatcaagg atgtatcctt caagggtagt attgaagtaa
    57841 ctgggactga tgcaagcctc actggtggta tcttgggtaa cggtacgatg gcaagtgttg
    57901 gaaatgccaa ggttgatgcg accattaccc ttccaggtac agagaatcaa gtagctggtg
    57961 gtatcgtcgg tcgtaccatg cttgtctacg atgtaccagg aagtgtctat cattcgtacg
    58021 caacaggttc aatcgtgaca aatggtacag aggcaaccat cggtggaatt gctggttcca
    58081 accaagtgac aggtgcctat gctccacata gcggtaatgt caacaacgtt gtcagcgata
    58141 tgactggtac gaaaagcatt atcggtcaac ccgcaaatcc aactggtaag attaaagacg
    58201 gtttcactac aacatctgat agcttgacca acgtcactgt tatcactgat gaagaagcgc
    58261 aagcaaaagt agaagctatg gctattcaag cgacaattga tgattctgta ccgcttaatc
    58321 tcaatcatta ttcagtagac tacttgacct tggataaggc acaggctgac catgaaactg
    58381 cctactacaa catggagaaa atcttgccat tctacaacaa ggaacttctt gtctattatg
    58441 gaaacaagat tgcgacagac gataagctca acaaggtccg tttgctggat gttgtaccaa
    58501 tgaaggacaa tgctgtagtt gctgacgtct acgctgagaa ggctaatatc aataagatta
    58561 tgcttcacta tgctgatggc actgtggact acaagacagt ttcttatcta gaagacttca
    58621 agaataatca tgtggtcgag tataccattt caggtacgga cttgatttac acgccagaat
    58681 cattcttgaa tgacagaagt gcccttgtca atgacttggt aagcagcctt tcttctgttg
    58741 tcctcgactc ggatgccatg aaggctgtta tcaattatcc aacaaaatta aatgcggata
    58801 ctcagactgg cacagctaaa gacttctact ttggtgacag ctataaccaa gtaatggcta
    58861 acctagaaag caacgttcgt aagattttgg ttgctagtct aaatggtcaa ggtcaggctt
    58921 ctgaagacta catcaaagag aaaatcacca ataacaaagc agcctttgtg ctcggtttga
    58981 cttacttgaa ccgttggtat gacatcaact tcggagagat gaataccaaa gacttgacca
    59041 tctttgaacc tgacttcttc ggaaatgatg tagcatctgc ccttgatatg attcttgcaa
    59101 ttggtaatgg tggctatgat gttcttcgtg cccacaataa cgtgaccact tttgcatcca
    59161 tcattggtaa acaaaataat cagaccaagc ttttcgatat gctggaagat tatcgtcagc
    59221 tcttcttgcc agaaatgacc aacaatgaat ggttcaagca aacaaccaag gcatatgttg
    59281 ttgaaggtaa gtccttgatt ccagaagtag ctgcaaagca ggaaacgaca gatacttata
    59341 gcaagtacaa tgttggagct tatagcaaga ttgtgaatga tacggtatct aacccagctt
    59401 ggaagtacaa tcacatgctc ttgccacttt tgaccttgcc acaagagaat atctttatca
    59461 tcactaacat gaataccatc gcgattggtt cttatgaaca ctacgtagat gattattcga
    59521 cagtggaaaa tcgtgataag gttcgtcaga tggttgattt ggcggcagaa cgtcagcgtg
    59581 ataatgcaga cttctggtat aagattttgg atgaaaccaa ccgtgacaag ctattcagat
    59641 ctgtcctcaa taacgaaggt tatgtgatgt atggtaaaga tggtacgaag tcttatcgca
    59701 acttgacagc tgatgttgat gctatccaag atttctacgg tccgatcaac aagtggtatc
    59761 gtgagcatcc gtctattaag actgcctttg cggatggaag tgagacctac tatatcactt
    59821 acgatatgtt gacggattac ggtacagctc tttataccca cgaaatggtt cacaaccaag
    59881 atggtgatat ttatctgaaa ggctatggcc gccgtattgg tcaaggtatg gaagtttacg
    59941 cccaaggtct tctacaaaat gtcttcaatg ttactgagat gaaccttgga ttcaacgctg
    60001 tctataatag cgatgatgcc aaccgtgtcc atgtcggaga cccagttgca cgtttcaata
    60061 gcgaagctga tttcaatgag tattacctta accaatttga tgtactttac ttgctggatt
    60121 acctagaagg tacaagcatc ttggctcaat cagatgctaa caagaaagct tggttgcgta
    60181 atattgaaaa ctactatgtc caaaataatg gtgttgatac ccaagctgga aactctgcgc
    60241 gtgcattgac agatgccgaa gtggcaagct tgaagtcctt caatgatttg attgatcaga
    60301 gcattattgt tcaacgccaa tatgtcaaca atccaactaa cacaagcaag aagtgggata
    60361 gaaacagtta tgtcagcgtt ccaatgtttg cagctaactt ctcagccctt tcaaactcaa
    60421 acggttctcc aggcgacatc atgttccgcc gtatggcctt tgaattgatt gcagctaaag
    60481 gctacacaga tggttttgtg ccgtatgctt ccggacaatt atccgaccta gccatggaaa
    60541 aaggttctaa gatttacgat acatggacta aaaaagatgt tggtttgatt acagacaatc
    60601 ttgtcttaga atatgtcttc caaggtcaat atacttcatg ggctgagttc aagaaagcca
    60661 tgtttactga gcgtttggaa aaagcagcag caggccaact caagccgttt accatgcagt
    60721 atgaacttga tgttgctgat tcaaccaagg aagtaactat cacaagcttt gagcagttgc
    60781 aaaacttgat gaaagaggcc atggaagcag acatccaagc aaatagttta aacttgaaca
    60841 acagtcgtgt tcatgcactc aaagtgaaag tttatcaagc cttgatgaac tctacaaatg
    60901 acttcagaac atcgattttt aacccataat ca
//
LOCUS       DASFQD010000002        48722 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.002, whole genome shotgun sequence.
ACCESSION   DASFQD010000002 DASFQD010000000
VERSION     DASFQD010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 48722)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 48722)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..48722
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.002"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(107..2608)
                     /locus_tag="U1021_000054"
     CDS             complement(107..2608)
                     /locus_tag="U1021_000054"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014639013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEM4710656.1"
                     /translation="MSFYNHKEIEPKWQGFWAKNHTFKTGTDAAKPNFYALDMFPYPS
                     GAGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDAFGLPAEQYAMDTGNDPADFTA
                     ENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNWVE
                     ELGTAIANEEVLPDGTSERGGYPVVRKPMRQWMLKITAYAERLLNDLEEVDWPESIKD
                     MQRNWIGKSTGANVTFKIKDTDKDFTVFTTRPDTLFGATYAVLAPEHDLVDSITSPEQ
                     TEAVAEYKRQASLKSDLARTDLAKDKTGVWTGAYAINPVNGKEIPIWIADYVLASYGT
                     GAIMAVPAHDERDWEFAKQFGLDIIPVLEGGNVEEAPYTEDGAHINSDFLDGLNKEEA
                     IAKMVAWLEENGVGQEKISYRLRDWLFSRQRYWGEPIPIIHWEDGTSTAVPENELPLV
                     LPKTSDIKPSGTGESPLANLTDWLEVVREDGVKGRRETNTMPQWAGSSWYYLRYIDPH
                     NDEKLADEDLLKAWLPVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLFN
                     QGMILGTSYRDSRGALVATDKVEKRDGSFFNIETGEELEQAPAKMSKSLKNVVNPDDV
                     VEQFGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFLDRVYRLLTTKELAAENSGALD
                     KVYNETVKTVTEHIEDLKFNTAIAQLMIFVNAANKEDKLYVEYAKGFVQLIAPFAPHL
                     AEELWQGLTNTGQSISYVAWPTYDESKLVESEVEIVVQIKGKVKARLTVAKDLAPAEL
                     EKVALADEKVQAEIAGQTVVKVITVPNKLVNIVTK"
     gene            complement(2711..4603)
                     /locus_tag="U1021_000055"
     CDS             complement(2711..4603)
                     /locus_tag="U1021_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010922744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase"
                     /protein_id="HEM4710657.1"
                     /translation="MTRLQDDFYEYVNGEWAKTAVIPDDKPRTGGFSDLADEIEKLMI
                     DTTNAWLAGEDVPEDSVLQNFVAFHKQVADYETRDRLGAEPAQALIAEYKALNSFEEF
                     TSKLAEYELAGKPNLMPFGVAPDFMDATTNVLWADSLGIILPDTTYYEEGHEKGAELL
                     KIWRESQEALLPKFGFSDEEIKDLLDKRLELDATIAKYVLSNEEGSEYAKLYHPYEWA
                     DFTALAPELPLDDFFTAILGQTPDKIIVPEERFWQAAKDIYSADNWELLKATLILKAA
                     GAYTAFLSDEIRILAGAYSRALSGTPQAQNQEKAAYNLAQGYFNQALGLWYAGEKFSP
                     EAKADVEAKVAKMIEVYKSRLETADWLAQETRDKAIVKLNVIKPYIGYPEALPERYYK
                     KIVDPSKSLVENAIELNKIDIAHGWSKWNKPVDIKEWGMPAHMVNAYYNPQKNLIVFP
                     AAILQAPFYSLEQSSSANYGGIGAVIAHEISHAFDSNGASFDEHGSLNNWWTEEDYAA
                     FEARTQQVIDQFEGQDSYGAKINGKLTVSENIADLGGIAAALEAAKSEDDFSAEEFFT
                     NFARIWRMKARPEFMQMLASVDVHAPGHLRTNIQLPNFDEFHETFGVQEGDGMWRAKE
                     DRVIIW"
     gene            complement(4659..5498)
                     /locus_tag="U1021_000056"
     CDS             complement(4659..5498)
                     /locus_tag="U1021_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEM4710658.1"
                     /translation="MFEVLLILMVIASSCGLLGSILVVKNQSMLADALSHSVLLGIVL
                     GFFISHSLDSPLLIVGASLFGLLSVLAIDRLHSRKIAHDAATGLVFSFFFAVAVLLIS
                     LFARNVHLDVDLVLQGEVLFAPLHRMDVLAWSLPVSLVKSSLAWLVIVLFFAWAYHRL
                     QVYLFDSNHARLSGLRTRILEMVILILVSLTTVLAFEAIGSMTVIVFLVAPSMAALRW
                     VKSFWQLLLLGQGIAILTVVLGFLVANQLDLTMSGTCAVVSLLVVCSSIILKNTWSRS
                     SDK"
     gene            complement(5491..6351)
                     /locus_tag="U1021_000057"
     CDS             complement(5491..6351)
                     /locus_tag="U1021_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEM4710659.1"
                     /translation="MFEVFKEYSFWTVALGTVSLAVAASTIGSISVLTKQSLLGDALG
                     HASYPGVIVSFMIFQSRHPLYLLLGAVLSGYLSYVLVHWLRRKGGHSLVNALSLVSAS
                     FFGLGMVLKNAIQGNEAFAGSSQAGLQTYLFGQAAFIQLDDVILIGIISLLALALFTF
                     FYQDYKLYLFDQTFARVIGVRVKYLQQLTMFLMICLIAVGLKLVGAILMSSFLIAPAV
                     FGLMLGKSYHKSLLLAGIVAIGSAFVGTWISSSVSGLSTGPTIIVCLTGLTLSAFVYV
                     TYVRKENGRV"
     gene            complement(6344..7114)
                     /locus_tag="U1021_000058"
     CDS             complement(6344..7114)
                     /locus_tag="U1021_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEM4710660.1"
                     /translation="MSAIIELKDVNLAYTASQTMALEDVNLVIPRGSRTAIVGPNGAG
                     KSSLFKVILGLEKPDTGQVRLLGQEAGLERLIAQKVAYIPQSSQVNWQFPATVFEIVL
                     MGRFAHSKGMFRRPTKADRQIVEQALERLKIADLRHRQIDQLSGGQRQRVFLARALAQ
                     EAELYLMDEPLAGIDQATEIMIMDMLKEFQCEGKTSIVIHHDLTTLDAYFDHLVWLHK
                     HVIDSGPMDETLTSENYQATYGIGNGLFLGNAKGGSHV"
     gene            complement(7668..8591)
                     /locus_tag="U1021_000059"
     CDS             complement(7668..8591)
                     /locus_tag="U1021_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEM4710661.1"
                     /translation="MKKILFSFALLLSLIGLGACRPSQTTEGSSKPRVAVTTSFLNDM
                     VYQLAGDEVERDLLIPAGEDPHLYVAKSSDLSKLQKADLVLYHGLHFEGKMVEALEKT
                     GVAVSKNFNAKDLNTMDEDGEEIVDPHFWFSIPLYKSAVAVASEELQKLLPAKAEMIQ
                     KNAEKYQAQLDDLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAPQGVSTD
                     SEVANSDMIETVNLIIDHNIKAIFTESTTNPERMKKLQEAVKAKGGQVEVVTGEGKEL
                     FSDSLAPEGEEGDTFIDMYKHNVKLMVKYLK"
     gene            8717..9376
                     /locus_tag="U1021_000060"
     CDS             8717..9376
                     /locus_tag="U1021_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HEM4710662.1"
                     /translation="MTPNKEDYLKCIYELGQLDQKITNKLIAEKMAFSAPAVSEMLKK
                     MVAEELISKDAKAGYLLSQTALEMVASLYRKHRLIEVFLVEQLGYSPEEVHEEAEILE
                     HTVSDHFINRLDLLLEQPQTCPHGGSIPQAGQPLIERYQTRLSQLTETGNYQLVRIHD
                     FYQLLQYLEQHELAVGDLLTVTAFDQFAQTITIQYKDKELAVPTAIAQQLFIEKSNRP
                     A"
     gene            complement(9423..9686)
                     /locus_tag="U1021_000061"
     CDS             complement(9423..9686)
                     /locus_tag="U1021_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710663.1"
                     /translation="MRKFFQDLNQEYLETRSSVGEDWLEWIIQRKMTWGMRWGLVGIL
                     MFVLQPLTYNPHFLLGCFYIGFLLWLVYVCGQLFLQPDLFSVI"
     gene            complement(9792..9977)
                     /locus_tag="U1021_000062"
     CDS             complement(9792..9977)
                     /locus_tag="U1021_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710664.1"
                     /translation="MKKLLTNHFFYLTIAFLLILVIYFSGIDKRWIILASFLYFIPSQ
                     ILYRRRLRERLQEDQPE"
     gene            complement(10053..10496)
                     /locus_tag="U1021_000063"
     CDS             complement(10053..10496)
                     /locus_tag="U1021_000063"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000691442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HEM4710665.1"
                     /translation="MKIVLQRVSQASVTIEGSIHGQIEQGLLLLVGVGPDDTQEDLDY
                     AVRKIVNMRIFSDEAGKMNKSVQDVAGKILSISQFTLFSDTQKGNRPAFTGAAAPALA
                     SQLYDAFNQALSAFVPVEVGVFGADMAVSLVNDGPVTIVLDTKNK"
     gene            complement(10498..12699)
                     /locus_tag="U1021_000064"
     CDS             complement(10498..12699)
                     /locus_tag="U1021_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEM4710666.1"
                     /translation="MKEINFTGEEVVGLTATYLPAEDVAFVQKALDFATEAHKLQFRK
                     SGEPYIVHPIQVAGILAGLKLDAVTVACGFLHDVVEDTDVTLDDMEAEFGPEVRHIVG
                     GVTKLGKVEYKSHEEQLAENHRNMLIAMSQDMRVILVKLADRLHNMRTLKHLRKDKQE
                     RISRETMEIYAPLAHRLGISSIKWELEDMSFRYLNEVEFYKITRMMNEKRREREELVN
                     EVVDKLRDYTEERHLHGQIYGRPKHIYSIYRKMHDKKKRFDQLYDLIAIRCIMDTPSD
                     VYAMLGYIHELWKPMPGRFKDYIANQKANGYQSIHTTVYGPRGPIEFQIRTMEMHQVA
                     EYGVAAHWAYKRGGKATASEKELRWINNLIELQEGAGDAQTFVNSVKDDIFTERIYVF
                     TPDGAVRELPKDSVPIDFAYEIHTKVGERATGAKVNGRMVPLTTKLKTGDQVEIITSA
                     NSFGPSRDWVNLVKTHKARNKIKQFFKNQDKELSVSKGREMLQNLLQENGYVPNQYLD
                     RRHMDEVLQKTSYKTDESLFAAVGFGEVSAISIFNRLTEKERREAERAKAKAVADELV
                     NGGEVKHDNKDSLKIRHEGGVVIEGASGLLIRIAKCCNPVPGDEIVGYITKGRGVAVH
                     RVDCMNLKSQENYDVRLIDVDWEDENSTKEYMANIDIYGLNRSGLLNDVLKVLTNASK
                     NISSVNAQPTKDMKFATIHVSFGISNLATLTSLVDKIKSVPEVYSVKRTNG"
     gene            12963..15452
                     /locus_tag="U1021_000065"
     CDS             12963..15452
                     /locus_tag="U1021_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2',3'-cyclic-nucleotide
                     2'-phosphodiesterase/3'-nucleotidase"
                     /protein_id="HEM4710667.1"
                     /translation="MKFRFSKCALTLSLALLASTNNALVSAEETSTDTPVLKTETEIS
                     SSVATSQAEATTGEVATPTTTETTAGEAVTPTTETTDQSVTPVTEEAAPVVETSNTPV
                     NDTTASPVTATRAAATETTTPVEGQSVDVRILATTDLHTNLVNYDYYQDKPVETLGLA
                     KTAVLIEEAKKENPNVVLVDNGDTIQGTPLGNYKSIVDPIEEGEQHPMYAALETLGFD
                     VGTLGNHEFNYGLAYLEKVIRTANMPLVNANVLDPTTKDFLYTPYTIVKKTFTDTEGK
                     KVTLNVGVTGIVPPQILNWDKAYLEGKVIVRDAVEAVRDIIPTMRENGADIVLVLSHS
                     GIGDDQYEVGEENVGYQIASLSGVDAVITGHSHAEFPGTAEKPSFYAKYSGVDDTNGK
                     INGTPVTMAGKYGEHLGVIDLNLVFKDGKWTTTSSKAAIRKIDTKSSVADGRIIDLAK
                     EAHNETINYVRQQVGETTAPINSFFALVQDDPSVQIVNNAQIWYAKQQLAGTSEANLP
                     ILSAAAPFKAGTRGDASAYTDIPAGPIAIKNVADLYLYDNVVAILKVNGAQLKEWLEM
                     SAGQFNQVDPSSTEPQNLVNTDFRTYNFDVIDGVTYQYDITQPNKYDRNGKVVNETAS
                     RVRNLQYNGQDVTADQEFIVVTNNYRANGTFPGVREASVNYLLNLENRQAIINYIIAE
                     KVINPTADNNWTFTDSIKGLDLRFLTADRAKELVANQEGLVYLQASAENEGFGEFKFV
                     YTEPKVATPDEQQSDQGNTGQDIVLESGQRITLPAVNPPAPAPQHKLASPHSQASTKT
                     LPATGEATSMLSLLGLTLIGFVGAWTKKKEH"
     gene            complement(15573..16130)
                     /locus_tag="U1021_000066"
     CDS             complement(15573..16130)
                     /locus_tag="U1021_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710668.1"
                     /translation="MKRLSTPIFAALGFFLIVFVALNQFGRVPGTSYQIISELVLYNQ
                     ATEQTYEFENHEVRKAFIRQLSSTSSRGFQASDSRTSLETTYHETIMSENLISSIYGG
                     EEGRIMEFSRPRKSTLGNLVFASESVSYLVFARKYGNIRLETTILCQEFRVEQRLANQ
                     SNWVDLGTYTVKSPKETRYVPIYWE"
     gene            complement(16371..17086)
                     /locus_tag="U1021_000067"
                     /pseudo
     CDS             complement(16371..17086)
                     /locus_tag="U1021_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636729.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
     gene            complement(17096..18358)
                     /locus_tag="U1021_000068"
     CDS             complement(17096..18358)
                     /locus_tag="U1021_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710669.1"
                     /translation="MSELEQKEHRELIVSDDCFALIQKMSELDSSAYQRYEITNPNIL
                     AHVEKIVQPALKHHLKKAGQPNIPKGLFKVDLPIGDLHKIKGETDKYRAFVKGAEGKF
                     KAHAILTPAQVEIAKGAKAAAAVSGAMQVAAMVVGQYYMAEINGQLDSMKETLNDVKD
                     FQVREFKGTVRALIVNISQLSKFSADYVENAELARLKLMECANFRAEVTKLLEQVNLA
                     IEESITKGKGLSFEKYEQLIDKLSTNLFYQQTLLRLLAELSKLDLVFSQGVASEDSSY
                     YVYEYYLNNCNSLGEKIANWHKDKIKFFQIDTKRNRRTQEGPMKVVADIAKELDKNAH
                     VAAGVGFLGGLVGAAAGFGIGKAAGELNKAIRYIDVRKRTVKLISEQETVSYQSSKRL
                     SVNNYGENVKLLVEDGKVYYLLPDDSES"
     gene            complement(18372..19118)
                     /locus_tag="U1021_000069"
     CDS             complement(18372..19118)
                     /locus_tag="U1021_000069"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEM4710670.1"
                     /translation="MQQYFINGRAPQGVFQISDKDTAKHMFSVMRLQADEQIVLVFDD
                     GIKRLARVVDSQNQSVEIIEELSDNVELPVSVTIAMGFPKGDKLEFVAQKATELGMAA
                     LWAFPADWSVVKWDGKKLGKKAEKLEKIAQGAAEQSKRNRIPAVRLFEKKVDFLAQLA
                     GFDQIILAYEEAAKEGEQANLVKILSGLEIGQSVLVIVGPEGGVSPEEVAAFEGAGAV
                     KTGLGPRILRAETAPLYALSAISYATELLR"
     gene            complement(19120..20073)
                     /locus_tag="U1021_000070"
     CDS             complement(19120..20073)
                     /locus_tag="U1021_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001099287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEM4710671.1"
                     /translation="MNSWQELTIHVHRDAEEAVSNLMIETGSQGVAISDSADYVGQED
                     RFGELYPEVEQSDMIVITAYYPDTVDIEEVKADLATRLADLTGFGLETGQVSLESQEL
                     AEEDWADNWKKYYEPARISHDLTIVPSWTDYEATAGEKIIRLDPGMAFGTGTHPTTKM
                     SLFALSQVLRGGETVIDVGTGSGVLSIASSLLGAKEIYAYDLDEVAVRVAQENIDLNA
                     NTSNIHVAAGDLLRGVDIKAEVIVANILADILIHLTEDAYRLVKDEGYLIMSGIIADK
                     WDMVRASAEAAGFFLETHMIQGEWNCCVFKKTADRSGVIGG"
     gene            complement(20669..21022)
                     /locus_tag="U1021_000071"
     CDS             complement(20669..21022)
                     /locus_tag="U1021_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEM4710672.1"
                     /translation="MVHEMLLAPKPFEMMKSGQKTIELRLYDEKRKHIQIGDRIRFYC
                     TENQTQTIEVQVLDLHIFDNFAQLYKELDLLSCGYTQSSIRGAKPEDMEDYYSREQLE
                     QYGAVGIELRVIDSI"
     gene            complement(21024..21494)
                     /locus_tag="U1021_000072"
     CDS             complement(21024..21494)
                     /locus_tag="U1021_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005591596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3013 family protein"
                     /protein_id="HEM4710673.1"
                     /translation="MAKHGFLDVLEAALDKHFTYDYELNWDKKNHAVELAFILEAQNV
                     AGIETVDDEGNASSEDIFLEEYVLFYNQDKSRFDEEDYLVALPFDAKKGFSAEFLTYF
                     AGFLKDTADQGLDDLMDFLVDPEAQDFAISWDGEAFEKGRADLLEGEFYPYPRY"
     gene            21568..22854
                     /locus_tag="U1021_000073"
     CDS             21568..22854
                     /locus_tag="U1021_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEM4710674.1"
                     /translation="MPANLALRMRPKSIDEVIGQEHLVGPGKIIRRMIDANMLSSMIL
                     YGPPGIGKTSIASAIAGTTKYAFRTFNATTDNQKRLQEIAEEAKFSGGLVLMLDEIHR
                     LNKTKQDFLLPLLENGNIIMIGATTENPFFSILPAIRSRVQIFELQPLKTSHIRQALE
                     LALTDSERGFDFPVTIEPEALDFLANATNGDLRAAYNSLELAVLSTKESDDGSRHIDL
                     DAVENSLQKSYISMDKNGDAHYDILSALQKSIRGSDVNASLHYAARLIEAEDLPSLAR
                     RLTVIAYEDIGLANPEAQIHTVTALEAAQKIGFPEARILIANVVIDLALSPKSNSAYL
                     AMDAALADLRKNGHLPIPNHLRDGHYAGSKELGNAIGYQYPHAYPEKWVDQQYLPDKL
                     LAADYFTANDTGKYERALGMTQEKIKNLKKNRRQNP"
     gene            22956..23149
                     /gene="ssrS"
                     /locus_tag="U1021_000074"
     ncRNA           22956..23149
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="U1021_000074"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            23158..23230
                     /locus_tag="U1021_000075"
     tRNA            23158..23230
                     /locus_tag="U1021_000075"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23191..23193,aa:Lys,seq:ctt)
     gene            complement(23335..23892)
                     /gene="nrdG"
                     /locus_tag="U1021_000076"
     CDS             complement(23335..23892)
                     /gene="nrdG"
                     /locus_tag="U1021_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014639014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HEM4710675.1"
                     /translation="MNNPKPQEWKSEELSQGRIMDYKAFNFVDGEGVRCSLYVSGCLF
                     HCEGCYNVATWSFKAGIPYTKELEDRILADLGQPYVQGLTLLGGEPFLNTGTVLPLVK
                     RIRKELPEKDIWSWTGYTWEEMMLETPDKLELLSYLDILVDGRYDRTKRNLMLQFRGS
                     SNQRIIDVQKSLQEKRVVLWDKLKK"
     gene            complement(24079..24573)
                     /locus_tag="U1021_000077"
     CDS             complement(24079..24573)
                     /locus_tag="U1021_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4710676.1"
                     /translation="MELRRPTIADKETILEMLAEFEAAGSAMDGGFISKDVDFEEWIF
                     RNKDYEAGLNLPDGFVPSIQYVSFDQTGRALGFLSLRLRLNDFLLNKGGHIGYSIRPT
                     ERGKGYAKDQLRLGLQEAATKNISKVLVTCSTDNQASRRTIVACGGVLEDVRDGVERY
                     WIED"
     gene            complement(24575..25921)
                     /locus_tag="U1021_000078"
     CDS             complement(24575..25921)
                     /locus_tag="U1021_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HEM4710677.1"
                     /translation="MDYTDISILHTNDMHSYMENFPKKAQLIANIRARNEKEGVPTFV
                     FDSGDLFSGNIFFNMYRGVKEIELMNQIGCQAMTLGNHEFDHGDELISRLDDYAQFPI
                     VSSNLRYQDVEVADELVPLEDVLEFDMNGKNLYVFGLTTLETQEVASPSENVIFEDHK
                     QALRRLVDQIVSQNPSAHLVLLSHLGYDEDVHLAKDFPELNVILGGHTHTILKQPSQI
                     GGVSICQAGQYGRFVGHLSLRCFADGRHEVQAYDLIEVEKLTQEDRAVKAIIDQMKSE
                     RDAAFSKPIAILPQALDGERDSIRQGLSTLAPVICQALFEQASQLGLQADGAVINGFG
                     IRASLSAGPIFYSDLVKVLPFSKRVLLVRIKGRDLLSSLQTGLHPQMWGIVQSGEDLL
                     VNGRAVESDKDYQIVTNSFVWSGKDNYDDFHKAEIVQDLGLDIDIISEFFKRQYGG"
     gene            complement(26150..28321)
                     /gene="nrdD"
                     /locus_tag="U1021_000079"
     CDS             complement(26150..28321)
                     /gene="nrdD"
                     /locus_tag="U1021_000079"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HEM4710678.1"
                     /translation="MNVQENVLPSIELLVLKRDGRTVSFDQDKIFSALRRANQELEHP
                     VSEAGLKIVLEAVLAEIGRRFEKDVQIYEIQTVVEQELLKAHLYDLAELYIQYRTRRD
                     FRRHQATDINFEIHKLLSKDQSVVNENANKDADVFNTQRDLTAGIVGKSIGLKLLPAH
                     VANAHQKGDIHYHDLDYSPYTPMTNCCLIDFKGMLAQGFKIGNADVESPKSIQTATAQ
                     ISQIIANVASSQYGGCSADRIDEVLAPYAELNYQKHLKDAKDWVLPDKQEEYARAKTQ
                     KDIYDAMQSLEYEINTLFTSNGQTPFTSLGFGLGTSWFEREIQKAILNIRIKGLGREG
                     RTAIFPKLIFTVKRGLNLEPDSPNYDIKQLAIECATKRMYPDMLSYDKIVELTGSFKV
                     PMGCRSFLQGWKDENGQDVTSGRMNLGVVTVNLPRIAMESAGDKDKFWEIFVERMAIA
                     KDALVYRVERVKEATPANAPILYQYGAFGKRLAKTDAVDEVFKNRRATVSLGYIGLYE
                     VATVFYGGEWETNPEAKDFTVDIIKKMKALVEDWSDEYGYHFSVYSTPSESLTDRFCR
                     MDTEKFGIVKDITDKEYYTNSFHYDVRKNPTPFEKLDFEKIYPAVGASGGFIHYCEYP
                     VLQQNPKALEAVWDYAYDRVGYLGTNTPIDHCYACDFEGDFEPTERGFKCPNCGNSDP
                     KSVDVVKRTCGYLGNPQARPMVKGRHKEISARVKHMNGSSL"
     gene            complement(28627..29370)
                     /locus_tag="U1021_000080"
     CDS             complement(28627..29370)
                     /locus_tag="U1021_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM4710679.1"
                     /translation="MIKIRNLVKEFSGQKVLDGIDMDIEKGQVIALVGPSGAGKSTIL
                     RSLNYLEQADAGSIEIDGFTVDFTNISKEEILTLRRKLAMVFQQFNLFERKTALDNVK
                     EGLKIVKRMDDASATALAKEELRKVGLSERENHYPRHLSGGQKQRVALARALAMQPDI
                     LLLDEPTSALDPELVGEVERSIADAAKTGQTMILVSHDMNFIYQVADKVLFLENGRIL
                     EQGTPEELFHHPKEERTREFFASYSNPQF"
     gene            complement(29370..30173)
                     /locus_tag="U1021_000081"
     CDS             complement(29370..30173)
                     /locus_tag="U1021_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM4710680.1"
                     /translation="MIGVLGITGPAWYQGFLEWLPDGKLFSIRAVFDALPSIIERLPI
                     TIGLTLAGAFFGLILGLVFAIVKINRVRFLYPVQAVFVSFLRGTPILVQLMLTYYGIP
                     LVLRGLNQEYGLDWNINAIPAAVFAITAFAFNEAAYMSESIRAAIQAVSPGEIEAARS
                     LGMTSGQVYRRIIIPNAAVIATPSLINTLIGLTKGTSLAFSAGIVEVYAQAQIQGGAD
                     YRYFERYISVSLVYWALSVLIESFGRFLENKMAIQAPESVDISGVGGDR"
     gene            complement(30359..31210)
                     /locus_tag="U1021_000082"
     CDS             complement(30359..31210)
                     /locus_tag="U1021_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002962793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM4710681.1"
                     /translation="MKLRTILSLAGITALATVALAACSSTSNSSNTSSSEADKKETIV
                     MGTVGTTKPFSYRDENGELTGFDIELARAIFDGSDQYELTFETTDGSGQFPGLDSGRF
                     DLLGNNTSYTKERGEKYLYSYPTASTPSVLAVPKDTDIQSYDDIGGHSTQVVTGTTTA
                     AQLEEYNTQHTDKPVDINYTGENITQILTNINDGKYDFKIFDAPTVNAIIADQNLTNL
                     KTIELEAAEKPFIYYVFSSDNTALQSFVNDRIKALNEDGTIAKLTEQFFGKDYAPTAE
                     ELAVPNE"
     gene            complement(31243..31929)
                     /locus_tag="U1021_000083"
     CDS             complement(31243..31929)
                     /locus_tag="U1021_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEM4710682.1"
                     /translation="MGKPIIGITSNEKPVAEGIPIMNLSLSRNFADGIKRAGGLPFYI
                     PLSGETDVVDYVSAIDKLLLTGGQHVLPQFYGQEKLIESDDYFKERDEFELKLVHEAL
                     RQEKPILGICRGMQLFNVARGGTLKQAVEGHRSLPFDLIHQVECKEATPLASIFGQRV
                     AVNSIHSQAIENLGQGLEAIVHSVDDGIIEAVRSMDETRFLGVQWHPELLIDQSGGNQ
                     KLFDYFVQTL"
     gene            complement(32043..32216)
                     /locus_tag="U1021_000084"
     CDS             complement(32043..32216)
                     /locus_tag="U1021_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710683.1"
                     /translation="MKIILTIVYSLGVVWNILFLAVNVGRIPVINLLWPAVILVACAI
                     NLYFLWTRKQESE"
     gene            complement(32469..35009)
                     /gene="mutS"
                     /locus_tag="U1021_000085"
     CDS             complement(32469..35009)
                     /gene="mutS"
                     /locus_tag="U1021_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002894103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEM4710684.1"
                     /translation="MATEKISPGMQQYLDIKANYPDAFLLFRMGDFYELFYEDAVEAA
                     QILELSLTSRNKNAENPIPMAGVPYHAAQQYIDTLVELGHKVAIAEQMEDPKQAVGVV
                     KREVVQVITPGTVTDSSKMGADSNYLVAIDRQGVQFALSYMDVSTGQFFVTSLDDFTS
                     LCGEIRNLRARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKA
                     AAGKLLSYLHRTQMRDLSHLQKVVHYEIKDYLQMDYATKSSLDLLENGRTGKKHGSLY
                     WLLDETKTAMGMRLLRTWIDRPLIDLKRIENRQAVVQVFLDYFFERSDLVEALKGVYD
                     IERLASRVSFGKTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAGLDPIPELHA
                     LISSAIDPEAQGAITDGNIIRTGFDETLDQYRLVMREGAGWIAEVEAKEREASGINNL
                     KIDYNKKDGYYFHVTNSNLGNVPSHFFRKATLKNSERYGTEELAKIEGQMLEARDKSS
                     NLEYEIFMRIRQEVEKYIGRLQKLARTIATIDVLQAFAVVAEQQHLVCPRFTDQRELT
                     INRGRHAVVEKVMGKQTYIPNSIHLNTDTHMQLITGPNMSGKSTYMRQLAVIVIMAQM
                     GSYVPADQAELPIFDAIFTRIGAADDLVSGQSTFMVEMMEANKAVRLATDQSLILFDE
                     LGRGTATYDGMALAQSIIEYIHDKIGAKTLFATHYHELTDLSQTLEHLENVHVSTLEK
                     DGQVTFLHKIAQGPADKSYGIHVAKIAGMPEELLQRADRILQTLENQAPTAPAKPAPS
                     VVAEPSGQIDLFADTPSHPVLKELEKLDIYNMTPMEVMMAVAELKKKI"
     gene            complement(35024..35464)
                     /gene="argR"
                     /locus_tag="U1021_000086"
     CDS             complement(35024..35464)
                     /gene="argR"
                     /locus_tag="U1021_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HEM4710685.1"
                     /translation="MNKAGRHDLIKSMIRQEKIGRQTDIQQGLEARGVVVTQTTLSRD
                     LRELGVIKIHENGQSFYSLAIEEERVNFIQLLAQYAYKVDRASFILVLHSELGEAALM
                     ANIIDAEKPETILGTLAGANTLLVICRDDVAAQQVEAEINYYLN"
     gene            35571..37259
                     /locus_tag="U1021_000087"
     CDS             35571..37259
                     /locus_tag="U1021_000087"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005591476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEM4710686.1"
                     /translation="MNQKQVIAERLAAILPSLEVEAIYNLLEKPKSSEMGDIAFPAFS
                     LAKVERKAPQAIAADIVEKLDTTGFEKVVATGPYVNFFLDKAAISHQVLTDVITEKDQ
                     YGKLNIGQGRNVTIDMSSPNIAKPFSVGHLRSTVIGDALANIHEKLGYKPIRINHLGD
                     WGKQFGMLIVAYKLWGDKAAVEADPISELLKLYVRINAEAEEKPELDDEARQWFKKLE
                     DGDPEAHELWQWFRDESLVEFNRIYDKLDVTFDSYNGEAFYNDKMDEGIQILEEKGLL
                     QESKGARIVDLESYNLPPALIMKTDGATLYITRDMATAMYRKRTYDFVKSIYVVGQEQ
                     INHFKQLKAVLKEMDFDWSDDMTHVTFGLVTKDKKKLSTRKGNIILLEPTLDEAISRA
                     LTQIEAKNPDLENKEEVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGPYVQ
                     YAYARIQSILRKANFVPNAENDYKLADAESWDIIKHIQNFSNVVERAGDKFDPSLIAK
                     YAINLAQAFNKYYAHTRILDESPERDSRLALAYATGLVLKEALRLLGVKAPEKM"
     gene            37439..38353
                     /locus_tag="U1021_000088"
     CDS             37439..38353
                     /locus_tag="U1021_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEM4710687.1"
                     /translation="MKTFLRRKGIACQLLAAIFIVGINLQSPPSASANARGDDYPYTA
                     VDAVDPWRLYTRQCTSFVAFRLSKVNGFEIPPAYGNADVWGYRAQREGYRVDMSPAVG
                     SVAWWETPMHVAWVSAVNGDTVEIEEYNYGVRYTYGRRVIPKNAVSGYIHFKNLGAGT
                     TNSQPAVAPSGTYTFTSQLAIKSQASLSSPTLDYYYAGESVRYDKVLEADGQRWISYI
                     SYSGARRYIAIQPTITQSTNNSLPASGSYTIQSYSSVRNNPSLSSPEITFYGAGSVVR
                     YDKVITAEGRTWISYISYSGARRYIAIS"
     gene            complement(38407..38931)
                     /locus_tag="U1021_000089"
     CDS             complement(38407..38931)
                     /locus_tag="U1021_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710688.1"
                     /translation="MKRPIHLYIFVVLSSIASVLRGFNVFFAKYDEAVVRQLLQNFNV
                     EGLDEVYFTYMRESVNFQTNLVNKAFAVVLLLAVIATIVLLFLKKNEQASYTYLGYLF
                     VTLLFSTYAFIGEKGLSQIYTDSVMRQSVEAQAMMNYIIRVVLFAIYFGVTVFFHLRK
                     PKEKPSTAINSTDI"
     gene            39043..39225
                     /locus_tag="U1021_000090"
     CDS             39043..39225
                     /locus_tag="U1021_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710689.1"
                     /translation="MKKLPTYIGVIIFVVTLLINWLLPSLAKVLNTFFIWTIVACLLY
                     TIYYWIRYWLYVRKQR"
     gene            complement(39265..40785)
                     /gene="malQ"
                     /locus_tag="U1021_000091"
     CDS             complement(39265..40785)
                     /gene="malQ"
                     /locus_tag="U1021_000091"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HEM4710690.1"
                     /translation="MKVRQSGVLMHISSLPGKYGIGSMGQSAYEFVDFLVRTKQRYWQ
                     ILPLGTTSYGDSPYQSFSAFAGNTHFIDFDILIDKGWLAAEDLHGVDFGQNPTEVDYA
                     AIFYARRPLLEKVVANMKAQGLPEDYWMFLGENDFWIHTFAEYMAIKEHFDLKPWTEW
                     EDQGARLRYHDTLEYYRHLLADQIDYHRITQYLFFSQWKALKAYANAKGVEFVGDMPI
                     YIAADSADMWANPHFFKTDEEGKPSVVAGCPPDAFSEIGQLWGNPIYDWEAMKHDGFT
                     WWVARLRESFKIYDMVRIDHFIGFASFWEIPAGEETAVNGYRVEAPGFELFDTIKREL
                     GDLNIIAEDLGSVTDKVIQLRDTTGFPGMKVLQFAFDPEGDSIEMPHNHPNNVVAYTG
                     THDNDTILGWYENETTKESRAFLDKYSNRREGETVSHALFRLLFGSPAFMAVATMQDL
                     LGLDGSARMNLPNTLGGNWTWRMTADQLTPEIEAELLDLTETYRRVNVHLVDEKSE"
     gene            41101..42360
                     /locus_tag="U1021_000092"
     CDS             41101..42360
                     /locus_tag="U1021_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEM4710691.1"
                     /translation="MKYNLLKSVALLAASTAVLAACSNSGSSTEASKSAEGSKELTVY
                     VDQGYESYINDVKADFEKENGVTVTVKTGDALTGLDNLSLDNQSGSAPDVMMAPYDRV
                     GSLGSEGQLSELTLADDSKADDTTTALVTNGGKVYGSPAVIETLVLYYNKDLLTEAPK
                     TFAELETLAKDSKYAFAGEEGKTSAFLADWTNFYYTYGLLSGYGGYVFGENGTNPKDI
                     GLANEGAIKAIEYAKTWYEKWPQGLQDGTAANNLINTQFTDGKAAAIIEGPWKAASYK
                     EAGVNYGVATIPTLVNGKNYSAFGGGKAWVVPAGAKNQEMAQKFVDFLTATDQQKALY
                     DATNEVPANTEAREYAVSKKDELTTAVINQFASAQPMPNISEMGSVWTPAGNMLFEAA
                     SGSKDAKTAATDAVKAIADEIAQKHSN"
     gene            42573..43868
                     /locus_tag="U1021_000093"
     CDS             42573..43868
                     /locus_tag="U1021_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003027817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM4710692.1"
                     /translation="MTMKQNPGKALLLSLIPGLGQIYNKQKAKGYIFLGVTLAFLVYF
                     IAIAAGELGNLITLGSVRGQDNSLFMLIRGSFHLIITVVYLAFYALNLKDARDTAKRW
                     NSGMPVATTLKEMVKGIYENGFPYLLIIPSYIAMTFAIIFPVVVTLFIAFTNYDFKHL
                     PPSALLDWIGITNFTNIWKLSTFRTAFGSVLGWTIIWALCASTAQIVIGILTAIIANQ
                     PFIKGKRIFGVIFLLPWAVPAFVTILTFSNMFNDSVGAINTQVLPFLSKFLPFIDNFL
                     IPWKTDPFWTKVALIMMQAWLGFPYIYVLTLGILQSIPNDLYEAAYIDGASAIQKFRN
                     ITLPMILAVAAPTLISQYTFNFNNFSIIYLFNNGGPGSVGGGAGSTDILISWIYKLTT
                     GTSPQYSMAAAVTLIISMIVISISMIAFKKLNAFEMEDV"
     gene            43870..44712
                     /locus_tag="U1021_000094"
     CDS             43870..44712
                     /locus_tag="U1021_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001065636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM4710693.1"
                     /translation="MKVSVKTRRILNQTLTYLYLIVLSVIIIYPLLITIMSAFKSGNV
                     VAFKLDSNINFTLDNFSKLFSETLYGTWYFNTLIIALLTMVIQTSIVVLAGYAYSRYN
                     FIARKQSLVFFLIIQMVPTMAALTAFFVMALMLNALNQSWFLIFLYVGGGIPMNAWLM
                     KGYFDTVPISLDESAKLDGAGHFRRFWQIVLPLVRPMIAVQALWAFMGPFGDYILSKF
                     LLREKEFYTVAVGLQTFISDVKNMKIAYFAAGAILIALPISILFFFLQKNFVSGLTSG
                     GDKG"
     gene            44772..45554
                     /locus_tag="U1021_000095"
     CDS             44772..45554
                     /locus_tag="U1021_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710694.1"
                     /translation="MLPYPFSYFSSIFSPRNMFANRRLMNLWQRLFTTLFLVALLLIP
                     SSLQTVNLETYPLENFVEGVYAPLTDQVVDDLRQYAVIENNHLTYTGNTNWEQVTFGD
                     TVSSSSDFTYQFANQSLTIRKGSDILSELTYEGLNTDDFASKETLTATISKKWYQANR
                     AAVGLSITLISTFILTTKLLFILLGASFFLFLTKKSRFFHFETFAECYNFALNCLGLP
                     TLIACLIGLFGQPVTTLLTIQNILFVLCLLWVFFKTKFRDEI"
     gene            45564..46547
                     /locus_tag="U1021_000096"
     CDS             45564..46547
                     /locus_tag="U1021_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM4710695.1"
                     /translation="MRATIKDVAKLAGVSPSTVTRVIQNSSAISQKTKDLVRKAMADL
                     NYHPNLNARSLVSSYTQVIGLVLPDDSDVFYQNPFFPTALRGISQVAADHNYAIQIST
                     GKNEEQRLEAISQMVYGKRVDGLIFLYSKPDDPLVQLAIQHKFPFLILGKADSPFISL
                     VDNDNIQAGFEATNYFINKGYKNIAFVAGNKELVVSQDRYTGYKNALKSHNIPLDENK
                     VKFVSGFLLEDSAYKISKKLLKQDLDAIVTTDTSVAEGVVKYLNEVGVKLPIISFDSV
                     KPKLDIEAYVDVHAIKLGRVAFNTLHQIINDNKEDKQVCYRRVIPHTITEL"
     gene            46571..48622
                     /gene="pulA"
                     /locus_tag="U1021_000097"
     CDS             46571..48622
                     /gene="pulA"
                     /locus_tag="U1021_000097"
                     /EC_number="3.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pullulanase"
                     /protein_id="HEM4710696.1"
                     /translation="MALRQFQASLDDVATIRLVMEKRFDSEHMSFSLESNDATSQLFI
                     HSCLEVDNLVIYYLTSLHALTLDKDYTIYDQDRNKTELGYGHIVRSTLFEQSYTYNGQ
                     DLGATYRPEATTFKLWAPISKQVFLVLEGNPHAMTKGAKGVWEITVEGDLEAHSYHYL
                     HKVNSEWISVHDPYALSSTANSGDSYVINPDKLHKIRRAKTQRPISQAIIYEMSVRDF
                     SWQKEAGFKHRSQFLGLTESPTMDGMKLGMDYIRELGVTHIQLLPVYDFGSVDENKPQ
                     AVYNWGYDPMQYNLPEGSYSSQPNDPYARILELQEAIQAYHDADISVIMDVVYNHVYH
                     AEKYAFELIVPGYFYRYDDHGMRTDGTFCGNDVASERSMVRNYIKQSLRQWLELYGFD
                     GFRFDLMGILDSETINQIQIELSAIHPNVYLYGEGWKMATGLEFEKLAHQYNAEQLPE
                     ISFFNDDYRDTFKKLLLNPNRLVDKQLHEKVQHLLTGSRLSHFLTPQQSLNYIECHDN
                     ATAFDYFHIENPNWTPQQQKRAASFGLQLILISQGMAFIHSGQEFFRTKDEIDNTYNV
                     PDRINHLDWTRAIRYKEHIEFIQELITFRKNNPILSQDNYESIQETCDFYWLTEYVLR
                     YQVTSEEKTIQFIINFADSDFTYEREKDKAVLYNYPPVEERDQQEITIAGQSICILED
                     K"
BASE COUNT        14011 a        11860 c         9437 g        13414 t
ORIGIN      
        1 tattatttac atttatttca caacaatatt aacaagttta gttggctcca acagtctgcg
       61 gatagactgt tggaggttgg aaatagacaa acaaacgagg caatcgttac ttggtaacga
      121 tattgacaag tttgtttgga accgtaatca ccttcaccac tgtctgccca gcaatttcag
      181 cttggacttt ttcgtccgca agggcaactt tttcaagctc tgctggtgct aggtctttgg
      241 ctacggtcaa gcgggctttt accttgccct tgatttggac aacgatttcc acttcgcttt
      301 ctaccagctt gctttcgtca tatgttggcc atgcgacata gctgattgac tgacctgtat
      361 ttgtcagacc ttgccagagt tcttctgcca agtgtggcgc aaatggggca atcaattgga
      421 caaagccttt ggcgtattcg acatagagct tgtcttcttt gttggctgcg ttgacaaaaa
      481 tcatgagctg ggcgatagcc gtgttgaatt tcaggtcttc aatatgctct gtcaccgtct
      541 tcacagtttc attgtaaact ttatcaagcg ctccgctatt ttccgccgca agctccttgg
      601 tcgtcaagag gcgataaaca cggtcaagga acttacggct gccctcgaga ccttcttctg
      661 accaggcgat tgacgcatca agtgggccca tgaacatctc gtaaacacgg agggtatccg
      721 caccgaactg ctcgaccaca tcgtctggat tgaccacgtt tttaagggac ttggacatct
      781 tagcaggtgc ctgctccaac tcctcaccag tttcgatgtt gaagaaagaa ccatcacgtt
      841 tttcaacttt atctgtcgca acaagggcac cacggctgtc acggtagcta gttcccaaaa
      901 tcataccctg gttaaatagt ttttggaaag gctctttagt cggcacaacg ccaaggtcat
      961 agaggaactt gtgccagaag cgagcataaa gcaagtgaag gactgcgtgc tcggcaccac
     1021 cgatgtagat gtccactggc aaccaagctt tgagaagatc ctcgtctgcc aacttctcat
     1081 cattgtgcgg gtcgatatag cggaggtagt accagctaga acccgcccat tgtggcatag
     1141 tgttggtttc acggcgacct ttaacgccgt cttcccgcac cacttccaac cagtctgtca
     1201 agttagcaag aggtgactcc cctgtacctg aaggcttgat gtctgaggtt tttggcaata
     1261 ccagaggtaa ctcattttct ggtacggctg tggaagtgcc gtcttcccag tggatgattg
     1321 gaattggctc accccagtaa cgctggcggc tgaagagcca gtcgcggagg cggtaagaaa
     1381 ttttctcttg accaacacca ttttcttcca accaagctac cattttggca atagcttctt
     1441 ccttgttaag accatctagg aaatcagaat tgatgtgggc accgtcctct gtgtaaggag
     1501 cttcttctac attgccacct tccagaactg gaatgatgtc caaaccaaac tgtttggcaa
     1561 attcccagtc acgctcatcg tgggcaggaa cggccatgat agcacctgtt ccgtagcttg
     1621 ccagtacata gtccgcaatc cagattggaa tttctttacc gttgacaggg ttgatggcgt
     1681 aggcaccagt ccaaacacct gtcttgtctt ttgccaaatc tgtacgggct aggtctgatt
     1741 tgagagaagc ttggcgtttg tactctgcca cagcttctgt ctgctcaggc gatgtaatgc
     1801 tatctaccaa gtcatgctca ggagcaagaa cagcataagt cgcaccaaaa agggtgtcag
     1861 gacgagttgt aaagactgtg aagtccttgt ctgtgtcctt aatcttgaaa gtcacattgg
     1921 cacccgttga cttgccgatc caattgcgtt gcatatcctt gatagactct ggccaatcaa
     1981 cttcttctag gtcgttgagc aaacgctctg cataggcagt gattttcaac atccattggc
     2041 gcattggctt gcggacaact gggtagccac cacgttcaga cgttccgtca ggaaggacct
     2101 cttcgttggc gatagctgtt cccaattcct ctacccagtt aacaggcact tctgcctcat
     2161 aggctaggcc tttttcatac aacttggtga aaatccactg ggtccacttg tagtagttag
     2221 ggtcagtcgt attgacctcg cggtcccagt cataagaaaa gccaagggcg ttaatctgac
     2281 gcttgaagtt agcaatattt tccgccgtaa agtcagctgg gtcattgcct gtatccatag
     2341 cgtattgctc agctggcaga ccaaaggcat cccaccccat tgggtgaaga acgttgtagc
     2401 cctgagcacg cttgtatcgg ctgagaatgt ccgtcgccgt atagccctca gggtgaccaa
     2461 cgtgcaagcc cgcaccagac ggataaggga acatatctag ggcataaaag tttggcttag
     2521 ccgcatctgt tcccgtctta aaagtatgat tttttgccca aaatccctgc catttgggct
     2581 cgatttcctt gtgattgtag aagctcatat catttctcca tgtcaataaa ttatctttac
     2641 tattatatca cgttttgggg gaattgggaa agacaaaaac agccagtttt cactagctgt
     2701 tttcgcattt ttaccaaata atcacacggt cttcttttgc acgccacatg ccgtcgcctt
     2761 cttgaacgcc aaatgtttca tggaattcat cgaagtttgg caactggatg ttggtgcgta
     2821 ggtgacctgg tgcatggaca tcgacactag ccaacatctg catgaactca ggacgagcct
     2881 tcattcgcca gatgcgagca aagttagtga agaattcctc tgcggagaag tcatcttctg
     2941 acttggctgc ttccaaggcc gctgcaatcc caccaaggtc agcaatgttt tctgacacgg
     3001 tcaacttacc attgattttg gcaccgtaag aatcctgacc ctcaaactga tcaataacct
     3061 gctgggtacg ggcctcaaag gctgcataat cttcctctgt ccaccagtta ttcaagctac
     3121 catgctcatc aaaggaagca ccgtttgagt caaaggcatg ggaaatctcg tgggcaatga
     3181 cggcaccgat accgccgtag ttggctgacg aagattgctc caaggagtaa aacggagcct
     3241 gcaaaatcgc cgctgggaag acaatcaagt tcttctgtgg gttatagtag gcgttgacca
     3301 tgtgagctgg catgccccac tccttaatgt ccacaggctt gttccacttg ctccaaccat
     3361 gggcgatgtc aatcttgttt agttcgatgg cattttccac caaggacttg cttgggtcaa
     3421 caatcttctt ataataacgc tctggcaagg cttctggata gccgatataa ggcttgataa
     3481 cattgagttt gacaatggcc ttgtcacgcg tttcctgagc caaccagtct gccgtttcca
     3541 aacgagattt gtaaacctca atcatcttgg caactttggc ttccacatcg gccttagctt
     3601 ctggtgagaa tttttctcct gcataccaaa gaccgagggc ttggttaaag tagccttgtg
     3661 ccaagttgta ggctgctttt tcttggtttt gcgcctgcgg tgtaccagaa agagcacggc
     3721 tgtaggctcc tgctagaatg cgaatttcat ccgacaggaa ggcagtatag gcgccagccg
     3781 ctttcaaaat caaggtcgcc ttcaaaagct cccaattatc cgcactgtaa atgtccttgg
     3841 cagcctgcca gaaacgttcc tcaggcacga taatcttgtc tggcgtttga cctaaaatcg
     3901 ctgtgaagaa atcatccaaa ggcaactctg gtgccaaggc agtaaaatct gcccactcgt
     3961 acgggtggta aagtttggcg tactcagaac cttcttcatt tgacagaaca tacttggcaa
     4021 tcgtggcatc tagttccaaa cgcttgtcca agaggtcctt gatttcctca tcgctgaaac
     4081 caaattttgg caggagggct tcttggctct cacgccagat tttgagtaat tctgcaccct
     4141 tttcatgacc ttcctcatag taggtcgtat ctgggaggat aatgcctaga gaatctgccc
     4201 agaggacatt ggtggtcgcg tccataaagt caggtgccac gccgaaaggc atgaggtttg
     4261 gcttgcctgc caactcatat tctgccaact tgctggtgaa ttcttcgaaa gagttgagag
     4321 ccttgtactc tgcaatcaag gcctgagcag gttctgctcc caaacggtca cgggtttcat
     4381 agtcggctac ttgtttgtga aaagccacaa agttttgcaa aacgctatct tctgggacat
     4441 cttctcccgc caaccaagcg tttgtcgtgt caatcatgag cttttcaatc tcatccgcca
     4501 agtctgagaa accacctgtt cttggcttat cgtctggaat cacagctgtt tttgcccatt
     4561 caccattgac gtattcgtaa aaatcatctt gtaaacgtgt cattgatttt ctcctttgtc
     4621 tttcttaatg actataataa caaaaaattc tgacaatttc acttatcaga tgaccgtgac
     4681 caagtatttt ttagaataat actcgaacaa accacaagaa ggctgacaac agcacaggtc
     4741 cctgacatgg ttaaatccag ttgattggcc actaaaaaac ctagcacaac cgttagaata
     4801 gcgatacctt gccctaaaag cagcaattgc caaaaggatt tgacccaacg tagggcagcc
     4861 atacttggtg ccaccaagaa aacaataaca gtcatcgagc caatcgcttc gaaggccaga
     4921 acagtagtta aggaaactag aatcaaaata accatttcta aaatccttgt tcgtaagcca
     4981 gacaaacgag catggttgct atcaaatagg tacacttgta aacgatggta agcccaagca
     5041 aaaaatagaa caataaccaa ccaagccaaa ctcgacttga ccagactaac agggagtgac
     5101 caggctagaa catccatacg atggagcgga gcaaaaagta cttccccctg caaaaccaga
     5161 tccacatcca agtgaacatt gcgagcaaaa agagaaataa gcaaaaccgc caccgcaaaa
     5221 aagaaagaaa aaactagacc tgttgcggca tcatgcgcta tctttcgact atgcagacgg
     5281 tcaatggcaa gaaccgataa taacccaaac agactggcac caactattag caatggcgaa
     5341 tccaaactat gactaataaa aaatcccaga acaatcccaa gcaagacaga atgcgatagt
     5401 gcatctgcca acatcgattg attttttaca accagtatcg agccgagcaa gccacaagaa
     5461 ctagcaataa ccatcaaaat gagcaatact tcaaacacga ccattctcct ttctgacata
     5521 ggtaacatac acaaatgcag acagggtcag acctgtcaga cagacgataa tagtcggtcc
     5581 ggtcgataaa ccagatacac tagagctaat ccaggtccct acgaaagccg acccaattgc
     5641 aacgattcct gccagtaaca gactcttatg atacgatttt cccagcatca agccaaagac
     5701 agctggtgca atcaaaaaac tactcatcaa aatagctccg actaacttta atcctactgc
     5761 aattaggcaa atcatcaaaa acatcgtcaa ctgctgcaag tactttacac gaacaccaat
     5821 aacccttgca aaagtttgat caaacagata tagcttatag tcttgataaa agaaagtaaa
     5881 caatgccaaa gccaatagag aaataattcc gatgagtatc acatcatcca gctgaataaa
     5941 ggctgcctgt ccaaatagat aggtttgcaa tccagcctgg gaggaccctg caaaggcttc
     6001 atttccctga atagcatttt tcaagaccat tcccaaacca aagaaagacg cagacaccaa
     6061 tgaaagggca ttgactaggc tgtgaccacc ttttcgacgc aaccaatgga caagtacata
     6121 agaaaggtag cctgacaaca ctgctcctaa cagcaagtag agaggatgtc gcgactgaaa
     6181 aatcatgaaa gagacaatca ctccaggata agaagcatgc ccaagagcat ccccaagcaa
     6241 actctgttta gtaagaacag atatacttcc gatagtgctg gctgctacag ctaggctgac
     6301 ggtccctaaa gcaactgtcc agaaagaata ctctttgaaa acctcaaaca tgactgcctc
     6361 ctttggcatt tcctagaaac aacccatttc ctatgccgta ggtcgcctga taattctcgc
     6421 ttgtcaaagt ctcatccatc ggaccagagt caatcacatg cttatgaagc cagacaaggt
     6481 gatcaaagta ggcatccagc gtcgttaagt catgatgaat gacaatggaa gttttccctt
     6541 cacattggaa ctccttgagc atatccatga tcatgatttc tgttgcctga tcaatccctg
     6601 ctagaggctc atccataaga tacaattctg cttcctgtgc cagggctctc gctagaaaga
     6661 cccgctgacg ctgcccacct gaaagctgat caatctgacg atggcgtaaa tccgcaattt
     6721 ttaaccgttc tagagcctgc tcaacaatct gtctatcagc cttagtcggt cttcgaaaca
     6781 ttcccttact atgagcgaag cgtcccatca gaacaatttc aaagactgtt gcaggaaatt
     6841 gccaatttac ttgactggat tggggaatat aggctacttt ttgagcaatc aacctctcta
     6901 gacctgcctc ctgaccaagc aagcgaacct gccctgtgtc aggtttttcc aaccccaaaa
     6961 tgaccttgaa tagactggac ttcccagcac catttggtcc aacaatagcc gtccgactcc
     7021 ctctgggaat caccaaattg acatcttcta aagccatggt ctggctggct gtatatgcta
     7081 aattgacatc ttttaattca atgattgctg acatatttcc tcctattttt aaaaatgata
     7141 tgcctcattc atactcaatg aaaatcaaaa ccagaccaac ctaccaagct gagaaagtcg
     7201 ataagattaa gataccgtac caacaaattg ctggcaaacc ctatacatcg cttatttcaa
     7261 cacatcagta catgaatttg attttcgcag agcaccaagg cttccttcaa tcgtatgttt
     7321 ataaatctgt taaaaatggt ccaaaaacgg aaagaactcg acctagaccg agtccttttt
     7381 actactcatt tgaaatccct attcacgcac agactactga tatataaagt cccgctgtga
     7441 accaagatca ttgaggtcta caagcggtat ttctagtcaa ggacctcaat aactggtgtg
     7501 atttgctact aacgcctatc ctcccccaag cgttaccacc tccaatagaa agagccctat
     7561 accgcttgtg ctcgaaacaa ttgattgtcc ctcatattgg tacctatcaa ctctatcttc
     7621 ggtaatatct ctagtcttca ttgaatagca agtccgttcg atctgtacta tttcagatat
     7681 ttaaccatca gtttaacatt atgtttgtac atgtcgataa aggtatcccc ttcctcgcct
     7741 tctggtgcca aggaatctga gaacaactcc ttaccttcgc cagtaacaac ttcaacctga
     7801 ccacctttgg cttttactgc ctcttgcaat ttcttcatgc gttctggatt ggttgtagac
     7861 tctgtaaaga tagccttgat attatggtcg atgattaggt taactgtctc aatcatgtca
     7921 ctgttagcca cttctgagtc ggtgctcacg ccttgaggag cataaagagt gaagtcataa
     7981 ctagcagcaa agtaattaaa ggcatcatgt ggtgttacca aatagcgact ttcttttgga
     8041 atcacactta attctttttc tacccaggca tgcaaatcat ctagctgcgc ttggtatttt
     8101 tctgcatttt tctgaatcat ctcagcttta gcaggtaaga gtttttgtag ttcctctgaa
     8161 gctacagcta cagctgactt gtacaaggga attgaaaacc agaagtgcgg atcgacaatc
     8221 tcttctccat cctcatccat cgtattcaag tcttttgcat taaagttttt agaaacagct
     8281 actccggtct tctccaaagc ttcaaccatt ttaccttcaa agtgcaaacc gtgatagaga
     8341 acaaggtcag ccttttgtaa ttttgataaa tcactagatt tggctacgta caaatgaggg
     8401 tcttctcctg ctggaatcag caaatcacgt tccacctcat cacccgccaa ctgatagacc
     8461 atgtcattga ggaaggaagt agtcacagcc actcttggct tactagagcc ttctgtggtt
     8521 tgcgatggac gacaagctcc taaccctatt agggacaata gcagagcaaa actgaacaat
     8581 attttcttca tataggttct ccttttattt ttattaagca tacctaacta tataattaga
     8641 ttaatctaaa aaaatcattt tgtcaactga tttttaaatt ttttgatata atagtttcag
     8701 aagaaagcga gttctcatga caccaaacaa agaagattac ctaaaatgta tttatgaact
     8761 aggtcaatta gaccaaaaaa ttaccaataa actcatcgca gagaagatgg ccttctccgc
     8821 accagccgtt tccgaaatgc ttaaaaaaat ggtagccgaa gagctcattt ctaaggatgc
     8881 caaggcaggt tatctcctca gccaaactgc ccttgaaatg gtagccagcc tctatcgcaa
     8941 acaccgcttg attgaggtat tcttagttga gcaactcggc tactctccag aagaagtaca
     9001 tgaagaagct gagattttag aacacaccgt ttcagatcac tttatcaatc gcctagacct
     9061 gctactggaa cagcctcaaa cttgtcctca cgggggaagc attcctcaag caggacaacc
     9121 gctcatcgaa cgctaccaga cacggctgtc acagctaact gagacaggga actaccagct
     9181 tgtccgtatc catgacttct atcaactcct tcagtacttg gaacaacatg aattagctgt
     9241 cggtgattta ctaaccgtca cagccttcga ccagtttgcc cagaccatca ccatccagta
     9301 caaggacaaa gagctcgccg tcccaacagc catcgctcaa caattattca tcgaaaaaag
     9361 caatcgccca gcctaaacaa gctgagcgat tttttcttct aaaataaata gttacctctt
     9421 tttcaaatta cggaaaatag atctggctgc aaaaatagtt gcccacatac atacaccaac
     9481 caaagtagga aacctatata aaaacagccc aatagaaaat gagggttata ggttaaaggc
     9541 tgcaagacaa acatgagaat ccctaccaac ccccaccgca taccccaggt catctttctc
     9601 tggataatcc actccagcca atcttctcca actgaacttc tggtttccag atactcttga
     9661 ttaaggtctt gaaaaaattt tctcatattt ctgcccacct catcctaact tcaaagcata
     9721 aactaccact ttatgacaat attatcatag cacattgttt tcaaataacc aatactgtcg
     9781 aaaaaaccag cctactcggg ctggtcttct tggagtcgct ctcttaggcg acgacggtat
     9841 aaaatctgcg atggaatgaa gtaaagaaaa cttgccaaaa taatccagcg tttgtcaatt
     9901 ccactaaagt aaatcactaa aatcaaaaga aaggcaatcg tcaaataaaa gaaatgattt
     9961 gtgagcaatt ttttcatagt agcctccata cctatttttc aatattagta tatcaaaata
    10021 cacaaataga gtacataccg ttgccaaaag ttttacttat ttttcgtatc caaaacaata
    10081 gtcaccggcc catcattgac caggctaacc gccatatccg ccccaaaaac gcccacttca
    10141 acaggcacaa aggccgacaa ggcctggtta aaagcatcat agagttggct ggctagggca
    10201 ggagctgcag ctcctgtaaa ggcagggcga ttaccttttt gggtgtccga aaagagggta
    10261 aattgggaaa tggataaaat cttgcccgcc acatcttgaa cggacttgtt catcttgcct
    10321 gcctcatctg aaaaaatccg catattgaca attttccgaa cagcatagtc caggtcttcc
    10381 tgtgtgtcat ctggccccac accgactagg agcaaaagcc cttgttcaat ttgcccatgg
    10441 atacttcctt cgatggtcac actggcctgt gatacacgtt gtagtacaat tttcatctta
    10501 tccgttggtc cttttcactg agtaaacttc tggcaccgac ttaatcttgt ccaccagact
    10561 ggtcaaggtt gccaggttgg aaataccaaa ggaaacgtgg atagtcgcaa acttcatatc
    10621 cttggttggc tgggcattga ccgaagaaat gttcttgctg gcattggtca aaaccttgag
    10681 aacatcattg agcagtcctg agcggttgag accgtaaatg tcaatgtttg ccatgtattc
    10741 cttggtcgaa ttctcatcct cccagtccac atcaatcaag cgaacatcgt agttttcttg
    10801 actctttagg ttcatacagt ctacacggtg aacagctacc ccacgcccct tggtgatgta
    10861 gccgacaatt tcatcgccag gtactggatt acaacatttg gcaatccgta tcagcaagcc
    10921 tgacgctcct tcaatgacca cgccaccttc gtgacggatt ttcagactat ctttgttgtc
    10981 gtgtttgact tcgccaccat tgaccaattc atccgcgaca gctttggcct tagcccgctc
    11041 agcttctcga cgttctttct ctgtcagacg gttaaagatt gatatggcag aaacttctcc
    11101 aaaaccaact gccgcaaaaa gggattcgtc ggtcttatag ctggtctttt gcaggacctc
    11161 atccatgtgg cgacggtcca ggtattggtt gggaacgtag ccattttctt ggagtaagtt
    11221 ctgaagcatc tcacgccctt ttgaaacaga caattccttg tcctgattct tgaagaactg
    11281 cttgatttta ttgcgagcct tgtgagtttt aaccaagttg acccagtcac gacttggacc
    11341 gaaagagttg gcagaggtga tgatttccac ctgatcgcct gtcttaagct tggtcgtcaa
    11401 aggcaccata cggccgttga ccttggcacc tgttgctcgc tcgccgacct tggtatgaat
    11461 ttcataggcg aaatcaatcg gtacagaatc ctttggcaac tcacgcacag caccatctgg
    11521 cgtgaaaacg taaatacgtt ctgtaaaaat atcgtccttg acagaattta caaaggtttg
    11581 cgcatcccca gccccttctt ggagttcaat caggttgtta atccagcgca actctttttc
    11641 gctggcagtt gccttgccac cacgcttgta agcccagtga gctgccaccc cgtattccgc
    11701 cacctgatgc atttccatgg tccgaatttg gaactcgatt ggacctctcg gtccgtaaac
    11761 cgtggtatga atagactggt agccgttagc tttttggttg gcaatgtagt ccttgaagcg
    11821 acctggcata ggtttccaca attcatgaat ataccctaac atagcataga catcgcttgg
    11881 agtatccatg atacaacgaa tggcaatcaa gtcatagagt tgatcaaacc gctttttctt
    11941 atcgtgcatt ttgcgataga tagagtaaat atgcttgggt ctaccgtaaa tctgaccatg
    12001 tagatggcgc tcttctgtat aatctcttag cttatcaaca acttcattga ccaactcttc
    12061 ccgttcacgg cgcttctcat tcatcatgcg cgtaatcttg tagaactcaa cttcattgag
    12121 atagcggaaa gacatgtctt ccaattccca cttgatagaa gaaataccta gacggtgggc
    12181 aagcggtgca tagatttcca ttgtttcacg tgaaatacgt tcctgcttgt ccttgcgcaa
    12241 gtgcttaaga gtccgcatgt tgtgaaggcg gtctgccagt ttaaccagaa tgacccgcat
    12301 gtcttgggac atggctatca gcatgttgcg gtggttttca gccaactgct cctcatgaga
    12361 cttatactca accttaccca gtttggtcac accgccgaca atatggcgaa cctctggacc
    12421 aaattcagcc tccatatcat ccaaagttac atccgtatct tcaaccacat catgtaagaa
    12481 accacaggca accgtcacag catccagctt gagtcctgct aaaatacctg ctacctggat
    12541 cgggtgtaca atatagggtt cgcccgattt acgaaattgt agcttatgag cttccgtcgc
    12601 aaaatccaag gccttctgaa caaaagcaac atcttcggct ggaaggtagg tggcagtcag
    12661 cccaacaacc tcttctcctg taaaattgat ttccttcatt tgtttctctc cctaactatt
    12721 tcctattatt ttaccatttt cactggaaaa gaaaaaggaa agcggtaatt catccatact
    12781 ataccattca aaatgacgat aaacaaagaa aaccagacaa acaatttttt agtcattgtt
    12841 cgttttttgt tgcttttatg aaaatttttc tttatttttc ttttgtgttt tcgtagaaac
    12901 cgttgatgtt ttcgttttca atatgtataa tattcttgag attatatcaa atggaggttc
    12961 tcatgaaatt tcgttttagt aagtgtgccc taaccctcag cctagcttta ctggctagca
    13021 ccaacaacgc ccttgtctct gctgaagaaa ccagcacaga tacccctgtt ttgaagactg
    13081 aaacagaaat cagtagctct gtagcaacca gccaagccga agcaacgact ggtgaggttg
    13141 ccacaccgac aactaccgaa actacagccg gtgaggctgt cacgccaact acagaaacca
    13201 ctgaccagtc tgttacacca gtaacagaag aagctgctcc tgttgtagaa accagcaata
    13261 ctccagttaa cgacacaaca gctagccctg ttacagcaac acgcgcagcg gctactgaga
    13321 ctacaactcc tgtcgaaggc cagtctgttg atgttcgtat cctcgcaaca actgacctcc
    13381 atacgaactt ggtcaactat gactattacc aggataaacc tgtagaaaca ctgggtctag
    13441 ccaaaacagc tgttcttatc gaagaggcaa aaaaagaaaa tccaaatgtc gtattggtag
    13501 ataatggaga caccattcaa ggtactcctc ttggaaatta caagtctatc gttgatccta
    13561 ttgaagaagg tgaacaacat cctatgtacg ccgccttaga gactctggga tttgatgtcg
    13621 gcacacttgg caaccacgaa tttaactacg gccttgccta cctcgaaaaa gtaattcgta
    13681 cagccaacat gcctctagtc aatgctaatg tcctcgatcc gactacaaaa gactttctct
    13741 acacccctta taccattgtg aaaaagacat tcacagacac cgagggtaaa aaggttacac
    13801 taaatgtcgg tgttacaggg attgttcccc ctcaaattct taactgggac aaagcttatc
    13861 tagaaggaaa agtgattgtt cgtgatgcag ttgaagccgt tcgcgatatt atcccaacca
    13921 tgcgagaaaa tggcgcagac atcgttctgg tcctttccca ctcaggtatc ggggatgacc
    13981 aatatgaagt cggcgaggaa aatgtcggtt accaaatcgc cagcttgtca ggagttgatg
    14041 cggttatcac aggtcactcc cacgcagaat tcccaggaac tgccgaaaaa ccaagcttct
    14101 atgctaaata ctctggcgtg gatgatacaa atggtaaaat caacggtact cctgtcacca
    14161 tggcgggtaa atacggtgaa cacctcggcg tcatcgacct caatctggtc tttaaagatg
    14221 gcaaatggac aactacttct agcaaagcgg ctattcgtaa aatcgataca aaatcatctg
    14281 tagcagatgg tcgcatcatc gaccttgcta aagaagccca taacgaaacc atcaactatg
    14341 tgcgccaaca agtcggtgag acaactgctc caatcaacag cttctttgcc cttgttcaag
    14401 atgatccttc tgtacagatt gttaacaatg cacagatttg gtatgcaaaa caacagttgg
    14461 cgggtacttc agaagctaat ctaccaatcc tatctgcggc tgcaccattt aaggctggta
    14521 ctcgaggcga tgcttcagcc tatacagaca ttcctgctgg cccaatcgcc atcaagaacg
    14581 tagcagacct ttacctctac gacaacgttg tagccatctt aaaagtcaac ggtgcccaac
    14641 tcaaagaatg gttggaaatg tccgcagggc aattcaacca agttgaccca agctcaacag
    14701 agccacaaaa cctagtcaac acagatttcc gcacttacaa ttttgacgtt attgacggag
    14761 taacttatca gtacgatatt acgcaaccaa ataaatacga tcgtaacggt aaggtagtca
    14821 acgaaactgc cagcagagtt cggaatctgc aatacaatgg gcaagatgtg acagctgatc
    14881 aagaattcat cgtggtgacc aacaactacc gtgcaaacgg tactttccct ggggtccgcg
    14941 aagcttctgt caattacttg ctcaatctgg aaaaccgcca agccatcatc aattatatta
    15001 tcgctgagaa agttatcaac cctacagcag acaataactg gacctttaca gatagcatca
    15061 agggactcga cctccgcttc ttgacagcag atcgtgcaaa agaattggta gctaatcaag
    15121 aagggctggt ttacctccaa gcctcagctg aaaacgaagg atttggcgaa ttcaaatttg
    15181 tctacactga gccaaaagta gcgactccag atgaacagca gtcagatcaa ggtaacacag
    15241 gtcaagatat tgtactcgaa tctggtcaac gaattactct tccagcggta aatccacctg
    15301 ctcctgctcc acaacataaa ttggctagtc cacattcaca agcgagcacc aagacactcc
    15361 ctgcaacagg agaagctact tctatgctta gtctgctcgg tctcactttg attggttttg
    15421 tcggcgcatg gactaagaaa aaagaacatt aaaataatca agagcttgtt ttttcaagct
    15481 cttttttacc ctcatacact ctctagataa attaatcaaa gcatataaaa atagctcgaa
    15541 gacgtactcg agctattttt atctttatat cgctactccc aataaatcgg tacatagcgg
    15601 gtttctttgg gactttttac tgtataggtt cccaaatcta cccagtttga ttggttcgcc
    15661 aaccgctgtt ctactctaaa ctcctgacaa aggatcgttg tttctaagcg aatgtttcca
    15721 tacttccttg caaaaacaag gtaagaaacg ctttctgaag caaagacgag attccccaaa
    15781 gtcgattttc taggacgact aaactccata attctacctt cttctccacc ataaatcgaa
    15841 gaaatcagat tttcgctcat aatggtttca tgataggttg tttcgagaga agtacgacta
    15901 tcagacgctt gaaaacctcg actagacgta ctcgatagtt gacgaataaa agcctttctc
    15961 acttcatgat tttcaaactc ataggtctgc tctgttgctt gattatacaa aaccaattcc
    16021 gagataatct gatagctagt ccctggaact ctaccgaatt gattaagagc aacaaagact
    16081 atcaagaaaa atccaagagc agcaaaaata ggggtactca atcttttcat gggcaatctc
    16141 catcacatat ctcctcaatc ttcgctaatt gcaacgacca ttgagctatg aacgaatcca
    16201 tcacgatcct gtttattcga atcgttcaga gcgatacatt cactatttgc taacgtgtgt
    16261 tcgagactat tttctctctt tagatgataa atcattcact ttattacaat aatagtatat
    16321 caatatgatt tttaaaaaac aactaatcag gtatgaaaat gtaaaccaga tcatgtaaaa
    16381 tatgaccaaa taactgcaat cacgatggct ggcaacatat tggccacacg aatctttttg
    16441 tcccagatga tattgacacc gacacagaag atgagggcgg agccgataaa ggagagattg
    16501 gcaagggcct gatccgtcat caaaggttca atcaggcggg ccaaaagagt cacagagcct
    16561 tgaaagagaa aaacgggtac tgctgaaaag cctgctccct tgtccaaact cgaggtcata
    16621 atcaaaatga taataaagtc cagaatactc ttaacggcca acaagcgata atcacccgtc
    16681 aatccatctt ggatggctcc tagtatggcc atagcaccga tacagacggt caaagaagct
    16741 gtcaggaagc atctaagaat tgaccatctt ggctgtttcc tgacctttct cggagccaga
    16801 tacccaagcg ctcaaaccaa ccttcgatat gcagtacttc cccaatcaag gtccccaggg
    16861 ctagactaag aaccaaaagc atgctatttt gacttttgag ttgaccatca acgactgtca
    16921 gcagtccttc taaactacct gaaattccta gaaataaaac agctagcccg ctcgccaccg
    16981 ttagtcctga ctgatgccgt tctttcagta aatggccaaa ccaagatcct agcaaacctg
    17041 ctagggcaat ggccaccgta ttgataatgg ttcctaatgc gaacatgatc ctcctttatg
    17101 attcactatc atctggcaat agataataaa cttttccatc ttcaaccaac aatttcacat
    17161 tctccccata attgttaaca gacaatcgct tactagattg ataggaaaca gtttcttgtt
    17221 ctgaaattag cttaactgtc cgttttcgaa catcaatgta acgaatggcc ttatttagct
    17281 ctccagccgc tttaccaatt ccaaaacctg ctgctgcacc gacaaggcct ccaagaaagc
    17341 ctactccagc agcaacatgg gcattcttat ccaactcttt tgcaatatct gcaactactt
    17401 tcataggacc ctcttgggta cgtctattgc gcttagtgtc aatttggaaa aattttatct
    17461 tatctttgtg ccaattggct atcttttcac ctagactatt acaattgttt agatagtact
    17521 catacacata gtaactacta tcctctgacg ccactccttg cgagaagact agatctagct
    17581 tactaagttc cgctaataat ctcaacaagg tttgttgata gaataaatta gtacttaact
    17641 tatcaattaa ctgttcatac ttttcaaaag ataatccttt tcccttagtg atactctctt
    17701 caatagctag attgacctgt tctagtaact tggttacttc agcacggaag ttagcacact
    17761 ccatcaactt tagtcttgca agttcagcat tttcgacata gtctgctgaa aattttgata
    17821 gttgagaaat attaactatc aaagcgcgaa cagtcccttt aaattccctt acttgaaaat
    17881 ccttaacatc gttcaacgtt tctttcattg aatcaagctg accattgatt tcagccatat
    17941 aatactgacc aactaccata gcagcgacct gcatagctcc tgaaacagca gctgcagctt
    18001 ttgctccttt tgcaatttca acttgagcag gagttagtat tgcatgagcc ttaaattttc
    18061 cttccgcacc tttaacaaaa gcacgatact tatccgtttc ccctttgatt ttgtgcaaat
    18121 cgcctatcgg caaatccact ttaaacaatc ccttaggaat attaggctgt ccggctttct
    18181 taagatgatg tttaagtgct ggttgaacta tcttttcaac atgagccaaa atattcggat
    18241 tcgtaatttc atatctctga tatgctgatg aatccaactc actcattttc tgaatgagag
    18301 caaagcaatc atccgaaaca atcaattctc ggtgttcctt ttgttctaat tcactcatct
    18361 cccgattctc cttacctcaa caattccgtc gcgtaactaa tagcagaaag ggcgtagagg
    18421 ggagccgttt ctgctcgcaa gatacgagga ccaagacctg tcttgaccgc tcctgctcct
    18481 tcaaatgcgg ctacttcctc aggcgacacg ccaccttctg gaccgacgat gacaaggact
    18541 gattggccga tttctaagcc agacaagatt ttcaccaggt tggcttgttc gccctctttt
    18601 gcggcctctt cgtaggctaa gataatctgg tcaaagcctg ctagttgagc taggaaatcc
    18661 acttttttct caaataaacg aacagctgga atgcgattgc gtttgctctg ctcggctgcg
    18721 ccttgggcaa ttttttctaa cttttctgct tttttgccta attttttacc gtcccatttg
    18781 accacggacc agtccgctgg aaaggcccag agggctgcca tgcctaactc cgttgccttt
    18841 tgggcgacaa attcgagctt atctcccttg ggaaagccca tggctatagt gacggaaaca
    18901 ggtaattcga cattgtctga cagttcttcg atgatttcaa cagattggtt ctggctatct
    18961 accacgcgcg ccaagcgttt aatcccgtcg tcaaagacta ggacaatctg ttcatctgcc
    19021 tgcaagcgca tgacagaaaa catatgcttg gcggtgtcct tatcgcttat ctggaacacg
    19081 ccctgcggtg ctctgccatt gataaaatac tgctgcatcc tagcctccaa tcacacctga
    19141 gcggtcagcc gtcttcttaa agacacagca attccactcg ccctgaatca tatgggtctc
    19201 aaggaagaaa ccagccgcct ccgcagatgc tcgcaccatg tcccacttat ccgcgatgat
    19261 gccgctcata atcaggtagc cttcgtcctt gaccagacgg taggcatcct cggtcagatg
    19321 gatgagaatg tccgccaaga tgttggcaac gataacttct gctttaatat ctacgccacg
    19381 aagcaaatcg cccgctgcaa catgaatatt gctagtatta gcgttgaggt caatattttc
    19441 ctgagccaca cgcaccgcaa cttcatccaa gtcataggca taaatctcct tggcacctag
    19501 gagggagcta gcaatagaaa ggacacctga acctgtgccg acatcaatga ctgtctcgcc
    19561 accacgcaag acctgagaaa gagcaaagag gctcatcttg gtcgtcgggt gggttcctgt
    19621 accgaaagcc atgcctggat ccaagcggat aatcttctcc ccagctgtcg cctcatagtc
    19681 ggtccaagac ggtacaatgg tcaaatcgtg gctaatgcgg gctggctcat agtatttctt
    19741 ccagttgtcc gcccagtctt cctctgccaa ttcctgactt tctaggctga cctgacctgt
    19801 ttccaagcca aagcctgtca aatccgccaa gcgagtcgcc aagtctgcct taacttcctc
    19861 aatatctaca gtatcaggat aataggccgt aatcacaatc atatccgact gttccacctc
    19921 gggatagagt tcaccaaaac ggtcctcctg ccccacatag tcagccgagt cgctaatagc
    19981 caccccctga ctgcccgttt caatcatgag atttgaaact gcttcttctg catcacgatg
    20041 cacgtgaatc gttaattctt gccatgagtt catgtttgtt gttccttttc ttttctatgc
    20101 gtcaatcact gtattattgt accgatttct agcctatttt acaagttaat gttacgcgat
    20161 ggagccctaa taatactttt tcgaaaattt tctaatcgca ctgcgaataa acatgtgtag
    20221 gaaagtttga gacggtggtt ccaagtttct gaacggaggt gatgcccatg aaagtggata
    20281 gcaaatctgc tagaaaggct agctcatgcc agatggtaag taaacttact catctggcaa
    20341 cgacaaatcc tataagattt gtctagggca cgcactagct cgagttttga aaaatatcgt
    20401 ttcaaaactc tcacgtcgga gaactctgga tttatattta tcaagtctac ttgttgaaat
    20461 gctgagcttg ataatcgtca tcattttagc tattcgagat aaaaaataac cgtcagcaaa
    20521 ctttgacaca gttctgacgg ttatttaatc taacgaactg aaccatcgtt atggtcctgt
    20581 cagggcgttg agctggaact caacgccttt tctattttta taatagcaaa agtttcgcct
    20641 gcagtcaagc aagaaagaaa acggaatgtc aaatagaatc tattaccctc aattctatac
    20701 caactgcacc gtactgttct aattgttctc gtgaatagta atcttccata tcttcgggtt
    20761 tcgcgcctct gatactgctt tgcgtatacc cacaagacaa taaatccagt tctttgtata
    20821 actgagcaaa attatcaaat atgtgaagat ctaatacttg cacctcgatc gtttgtgtct
    20881 gattttctgt acaataaaaa cggatgcgat ctccaatttg tatatgcttg cgcttctcgt
    20941 cataaagtcg tagctcaatg gtcttctgac cagacttcat catttcaaaa ggttttggag
    21001 ccagtaacat ttcatgaacc aactcaatac ctcggatatg ggtaaaattc tccctccaac
    21061 aagtctgctc tgcctttttc aaaagcctct ccgtcccaag aaatcgcaaa atcttgggct
    21121 tctgggtcca ccaaaaaatc catgaggtca tctaaacctt ggtcggcggt atctttgaga
    21181 aagcctgcga agtaggtcag aaactccgct gaaaagccct tcttggcgtc aaatggcaga
    21241 gcgaccaggt agtcttcctc gtcaaagcga gacttgtcct ggttgtagaa aaggacatac
    21301 tcctctagga aaatatcctc agaagacgca ttaccttcgt cgtccaccgt ttcaatccca
    21361 gccacatttt gcgcttccaa gataaaagcc aactcaactg cgtggttttt cttgtcccag
    21421 ttgagctcgt aatcgtaggt aaaatgtttg tccagtgccg cttccagcac atctaaaaat
    21481 ccatgttttg ccatgtcagt cctctttcga ttttgtgtta taataagtgt accataatca
    21541 gctaacaaaa gaaacgaaag gaagcctatg ccagccaatc tcgcccttcg tatgcggccc
    21601 aaatccattg atgaagtcat cggtcaggaa cacctggtcg gtcctggaaa gattatccgt
    21661 cgcatgattg atgccaatat gctgtcgtcc atgattctct acggtccgcc agggattggt
    21721 aagacctcga ttgcgtccgc cattgctggt acgaccaagt atgcctttcg aacctttaat
    21781 gccacgacag acaaccaaaa acgcctgcag gaaatcgctg aagaagctaa attttctggt
    21841 ggcctggtcc tcatgctcga tgaaatccac cgcctcaaca agactaaaca ggacttcctg
    21901 cttcctcttt tggaaaacgg caatatcatc atgattggag caacgacgga aaatcccttc
    21961 ttctcaattt tgcctgccat tcgcagtcgg gtgcagattt ttgaattaca acctttgaaa
    22021 accagtcaca tccgacaggc cttggaactg gctctgacag acagcgaacg tggttttgat
    22081 tttcccgtca ccattgaacc tgaggccctg gattttctgg caaatgcgac aaacggtgac
    22141 cttcgtgccg cttacaattc tctagaactg gctgtgcttt cgaccaagga aagtgacgac
    22201 ggtagccgcc acattgatct ggacgccgtg gaaaatagcc tgcaaaagtc ctacatcagc
    22261 atggacaaga acggcgatgc ccactacgat atcctctccg ccctacaaaa atccattcga
    22321 ggtagcgatg tcaatgccag cctccactac gccgctcgtt tgattgaggc cgaagatctg
    22381 cctagtctgg cccgtcgctt gacggtcatt gcctacgaag acatcggctt ggccaatcca
    22441 gaggctcaga ttcatacggt gacggccctt gaagccgccc agaaaattgg ctttccagag
    22501 gcacgcattt tgattgccaa tgtggtgatt gatttggctc tttctcccaa gtccaattct
    22561 gcctatctgg ctatggatgc agctctggct gatttgcgga aaaacggcca tctgcccatt
    22621 ccaaatcatc ttcgggatgg ccactatgct ggcagcaagg agctgggaaa tgctattggc
    22681 taccagtatc cgcatgccta tcctgaaaaa tgggtggacc agcaatacct gcccgataag
    22741 ttactagctg cggactactt caccgccaac gacactggaa aatacgagcg tgccttgggc
    22801 atgacacaag aaaagataaa aaatttgaaa aaaaatagac gccaaaatcc ttgatagaac
    22861 tggtttttgg gtacacacgc tttgacaccg cttacatttt tgccattttt ctcttgattt
    22921 ttcaaaaaaa agtggtatta ttaaatcata aataagaact gctgtggtat acgaattcat
    22981 acctatgtgt tgaccgacta tttttgtatt actagggaga caaagatcct ctaacagtat
    23041 gcaagctggc acacccagaa gcaactaagt tagaaacgcg tcacccacct gcttttagcg
    23101 tgcgggatca atacaatcca tggataaccg gtaccaatac agcattttta ttttttacct
    23161 tccttagctc agctggcaga gcagcggact cttaatccgt gggtcgtagg ttcgatccct
    23221 acagggagga ttggttgata tgaggaaagt cttgatttat caaggctttt tctcgttttt
    23281 tgagtgaatt tggtcaaaat ttggtcaaaa agaatccttt cacattgtga agggctattt
    23341 ttttaactta tcccacagga caacacgttt ttcctgtaat gatttctgta catcgatgat
    23401 gcgttggttg gaagagcctc gaaattgcag cataagattg cgcttggtac ggtcataacg
    23461 gccgtcaact agaatatcta aataggatag taactctaac ttatccggag tttctaacat
    23521 catttcttcc catgtgtagc ctgtccaaga ccaaatgtcc ttttctggca gttctttccg
    23581 aattcgcttt acgagtggga ggaccgtgcc tgtgttcaga aaaggctcgc cacccaagag
    23641 agttaagccc tgcacatagg gctggcccaa gtctgctaaa atgcggtctt caagctcctt
    23701 ggtataggga atccctgctt taaaagacca ggttgcaaca ttgtagcagc cctcacagtg
    23761 aaacagacag ccactaacat atagagagca acggactcct tctccatcca caaagttaaa
    23821 ggctttgtag tccattattc gcccttggct aagttcctcg ctcttccatt cttgtggttt
    23881 aggattattc atttcaaata cttgagcata agcaaatgaa atctgatcgt ttggatgaat
    23941 tccgttttac cagtacacag actgttttta tccataaatg gtacttccaa tgctttagct
    24001 cggattgatc ccagcaagct tagtgcggaa ccaatctcaa ttcctttcct gttttgattc
    24061 agcagtttgt cactcccatt aatcctcaat ccagtatctt tctactccgt ctcgaacatc
    24121 ttccaaaacg ccaccacaag ccacaatcgt gcgacggctg gcttgattgt ctgtcgagca
    24181 agtcacaagg accttggaaa tatttttggt tgcggcttcc tgtaaaccaa gtcgcagctg
    24241 gtccttggca tagccctttc ctcgctcggt cggacgaatg gaatatccga tatgaccgcc
    24301 tttattgagc aggaaatcat tgagccgtag gcgtagactg agaaaaccaa gggctcgacc
    24361 agtctggtca aatgacacat attgaatgga aggaacaaaa ccgtctggca gattgagacc
    24421 tgcctcatag tctttgtttc taaaaatcca ttcttcaaag tccacatctt tggagataaa
    24481 gcctccgtcc atagctgagc ctgccgcttc aaactctgcc agcatttcca aaatcgtttc
    24541 cttatccgct atagtcggtc ttcttagttc cattctagcc tccatattgt ctcttgaaaa
    24601 attcactgat gatgtctata tccagtccca agtcctgcac aatttctgcc ttgtggaaat
    24661 catcatagtt gtccttaccg ctccaaacaa aagaattggt cacaatctga tagtccttat
    24721 ctgactcgac tgctctgcca ttgaccaaaa gatcctcacc gctttggaca atgccccaca
    24781 tctgagggtg gaggcctgtc tggagactgg agagtaagtc tctgcccttg atacgaacta
    24841 agagtactcg cttggaaaag ggcaagacct tgaccaagtc cgaataaaag attggtcccg
    24901 ccgacaagga agctcgaata ccgaagccgt tgatgaccgc tccatccgcc tgcaaaccta
    24961 gttgactcgc ctgttcaaat aaagcctgac aaataacagg ggccagagtt gataaccctt
    25021 gacgaatgct gtctcgctct ccgtctagtg cctgaggtaa aatcgctatc ggtttggaaa
    25081 aagctgcgtc acgttccgat ttcatctggt cgataatagc cttgaccgcc ctgtcttctt
    25141 gggtcagttt ctccacctca atcaagtcat aagcctgaac ctcgtgccgt ccatctgcaa
    25201 aacaccgcag ggatagatga ccgacaaagc gaccatactg accagcttgg cagatactaa
    25261 ctccgccaat ctgactaggt tgttttagaa tggtatgggt atgtccgccc aaaatcacgt
    25321 taagctcagg gaaatccttg gccaaatgca catcctcatc gtatcccaga tgactgagca
    25381 agaccagatg agccgatgga ttctgactca caatctgatc caccaatcgc cgcagagctt
    25441 gtttatggtc ttcaaaaatc acattctccg acggtgacgc aacctcctgg gtttccaagg
    25501 tagtcaaacc gaagacatag aggtttttcc cattcatatc aaattcaagg acatcctcaa
    25561 gcggcaccaa ctcatctgcc acctccacat cctgatagcg gagattggag gacacaattg
    25621 gaaactgggc atagtcatcc aagcgactaa tcaactcatc tccgtggtca aactcatgat
    25681 tgcccaaggt catagcctga caaccaattt gattcattag ctcgatttcc ttgactcctc
    25741 ggtacatatt gaaaaagata ttacccgaaa agagatcgcc gctgtcaaag acaaaggtcg
    25801 gaactccctc tttttcattc ctagcccgaa tgttcgcaat cagttgcgcc ttctttggaa
    25861 aattctccat gtaggaatgc atatcattgg tatggagaat gctaatatct gtatagtcca
    25921 tactattttt tcttattttt tgcttgtttg agcaattcct gcacacgcgc ttttttatcc
    25981 tgcttcacat tagaattctt ctcgtgatag cgtgtcacca gggccttccc cttatcgtct
    26041 aattgatatt ttcccattgt tttctcctct ttttttatct cttatttgtt tataataaac
    26101 ttccacagct aactggaact gtggaagctc tacatagtct gtttattact tataagctcg
    26161 acccattcat gtgtttcaca cgcgccgaaa tttccttgtg acggcctttt accatcggac
    26221 gggcctgtgg attgcctaga taaccacaag ttcgtttaac aacatccacc gacttaggat
    26281 cgctattccc gcaatttgga cacttgaagc cacgctccgt cggctcaaaa tcaccttcaa
    26341 aatcgcaagc gtaacaatgg tcaattggag tattggttcc caagtaacca acacggtcat
    26401 aagcatagtc ccaaacagct tccaaggcct ttggattttg ttgcagcaca gggtattcac
    26461 agtaatggat aaatccacca ctggcaccta cagcaggata aattttctca aagtccagtt
    26521 tttcaaacgg tgttggattt ttgcgtacat cataatggaa actgttagtg taatattctt
    26581 tatccgtaat gtccttaacg atgccaaatt tctctgtatc catacggcag aagcggtctg
    26641 tcaggctttc agatggtgtc gaataaactg agaaatgata accatattca tccgaccaat
    26701 cttcaaccaa ggctttcatt ttcttgataa tatccaccgt gaaatctttt gcctctgggt
    26761 tggtctccca ttcgccaccg taaaatactg ttgcgacttc atacaaacca atgtacccca
    26821 aagatacggt tgctcgacga tttttaaaga cttcatctac tgcgtctgtc ttagccaagc
    26881 gtttgccgaa tgccccatac tgatacaaaa ttggtgcatt ggcaggtgtc gcctccttga
    26941 cccgctccac gcggtaaacc aaggcatcct tagcaatggc catacgttct acaaagattt
    27001 cccagaactt atccttatct ccagcagact ccatggcaat ccgtggcaaa ttgacggtta
    27061 cgacacccaa gttcatccga ccagatgtca catcctgccc attttcatcc ttccaacctt
    27121 gaaggaaaga acggcagccc attggcacct tgaaagaacc tgtcaactca acaatcttgt
    27181 cataagaaag catatctgga tacatacgct tggtcgcaca ttcaatcgcc aattgcttga
    27241 tgtcatagtt tggagaatct ggctccaagt tcaatccacg cttaacggtg aaaatcaact
    27301 taggaaagat agctgtccga ccttctcgcc ctagaccctt gatacgaatg ttcaaaatcg
    27361 ctttttgaat ttctcgctca aaccatgatg tccctaaccc aaaaccgagt gaggtaaagg
    27421 gtgtttgtcc attggaagta aagagggtgt tgatttcata ctccaaagac tgcatagcat
    27481 catagatgtc tttttgcgtt tttgcacgcg catattcttc ttgcttgtct ggcaataccc
    27541 aatccttggc gtctttcaaa tgcttttggt aattgagttc cgcataaggc gccaaaactt
    27601 catcgatacg gtcagctgag caaccaccat attgactaga agccacattg gcaatgattt
    27661 gtgaaatctg agccgtagct gtttggatag acttcggact ttctacatcg gcatttccta
    27721 tcttgaagcc ttgtgccaac attcctttga aatcaatcaa acaacagttg gtcattggtg
    27781 tataagggct gtaatccaaa tcatgataat ggatgtcacc cttttgatga gcattggcta
    27841 catgagctgg taataattta agaccgattg acttgccgac aatccccgct gtcaggtccc
    27901 gttgagtatt gaacacatcc gcgtccttat tggcattttc attgaccaca gactggtcct
    27961 tgctcaacag cttatgaatc tcaaaattaa tatcggtagc ctgatgacgg cgaaaatcac
    28021 ggcgtgttcg gtattgaata taaagctccg ccaaatcata taaatgagcc tttaacaatt
    28081 cctgttcaac gaccgtttga atttcgtaaa tttgaacatc tttttcaaat cggcgaccaa
    28141 tttcagccaa aacagcttct aatacaattt ttaaacctgc ctctgaaaca ggatgttcta
    28201 attcttggtt tgcccgccga agagcagaaa aaatcttatc ctggtcaaag gatactgtcc
    28261 gtccatcacg ttttaaaact aataattcta tactcggtaa gacattttct tgcacattca
    28321 tctgacaaac ctccaaaatt cttcacttct attagtgtag cacttcacaa aacaaaaatc
    28381 aatatcttgt gtaaaaaaat attaaacaac ctatccatgc actatatata ggtcttgaaa
    28441 attctatcaa ttggaaaaca actgtgccaa atttcaccac tcgacaagga tgaattacta
    28501 gattgaaata tgacaacaga ttgggcaaag gtctaacttc tctatcagaa aacctaaaaa
    28561 acagccctct aacagggctg gctctatgta ttgaaaatag gctagggcgg gtcaccacat
    28621 gcctatttaa aattgaggat ttgaataaga ggcgaaaaat tctctagtcc gttcttcttt
    28681 aggatgatgg aaaagctcct caggtgtccc ctgctccagg atacggccgt tttctagaaa
    28741 taatacctta tccgccactt ggtaaatgaa attcatgtca tgactaacta aaatcatcgt
    28801 ttgtcctgtc ttagccgcat cggcaatgga acgttctact tctccaacca actctggatc
    28861 aagcgccgaa gtcggctcat ctagtagcaa aatgtctggt tgcatggcaa gagcgcgtgc
    28921 aagagccaca cgttgctttt gaccacctga cagatgtctt ggataatggt tctcacgttc
    28981 tgacagaccg acctttctca attcttcttt ggcaagggcg gttgcagatg cgtcatccat
    29041 ccgcttgaca attttaagcc cttccttgac gttatcaaga gctgtctttc gttcaaacag
    29101 attaaactgc tgaaagacca tagccagttt gcggcgtaag gtcaatatct cctcttttga
    29161 aatattggta aaatcaactg taaaaccatc aatttcgata ctccccgcat ctgcctgctc
    29221 cagatagttc agactacgca aaatggttga ttttcctgct ccagatggtc caacaagggc
    29281 aataacctgc cctttttcaa tgtccatatc gattccatct agtacttttt gtcctgaaaa
    29341 ttccttgact aaattgcgaa ttttaatcat tagcgatcac ctccaactcc agaaatatct
    29401 actgattcag gggcctgaat agccatttta ttttcaagga aacggccgaa agactcaatc
    29461 agaacagaga gcgcccagta gaccaaagag acagaaatgt accgctcaaa gtagcgatag
    29521 tctgccccgc cttgaatctg tgcctgtgca tagacctcaa cgatacccgc actgaaggct
    29581 agggaagttc ctttagtcag accaatcaag gtgttaatca acgacggagt tgcaatcaca
    29641 gccgcattag gaatgatgat ccgacgataa acctggccag aagtcatacc taaggaacga
    29701 gccgcctcaa tctcccctgg actaacagcc tgaatcgcag cacgaataga ctcactcata
    29761 taggctgcct cattaaatgc aaaggctgta atcgcaaaga cagctgcagg aatagcattg
    29821 atattccaat caagaccata ttcctgattg agccctctaa gaaccaatgg aattccgtag
    29881 taggtcaaca tcagctgcac caagatagga gtgcctcgca aaaaactaac aaaaactgcc
    29941 tgaacgggat ataagaatcg cacacgatta atctttacaa tcgcaaaaac caagcccaat
    30001 atcaaaccaa aaaaagcacc tgcgagcgtc aagccaatcg taatcggtaa acgttcaata
    30061 atggagggta gggcatcaaa aacagcccta atactaaata gcttaccatc cggtaaccac
    30121 tctaaaaaac cttgatacca tgccggtcct gttattccta atacaccaat catactcttc
    30181 tccaaacatt taaaaatgac agattttctg ccgtatactc tattttatca tgtaaccacc
    30241 cacatcaacc ttatatatat tttatggctg tgataagtaa tcttaatgat tataaaaaga
    30301 caatgaaaaa gaaacagccc acttggactg ctccctcctg tcacaatact atcgactcct
    30361 attcattagg aacagctagt tcctccgccg ttggagcata gtcttttccg aagaattgct
    30421 ctgtcaattt cgcaatggtc ccatcttcgt tcaaagcctt gatacggtcg ttgacaaagc
    30481 tttgtagagc cgtattgtcc gaagaaaata catagtaaat aaacggtttt tctgctgctt
    30541 caagctcgat tgttttaaga tttgtcaaat tttgatctgc aataatagca ttaaccgtag
    30601 gggcatcaaa aattttaaaa tcatacttgc catcatttat attggtcaaa atctgtgtga
    30661 tattttcacc agtatagttg atgtcgactg gtttatccgt atgctgagta ttgtattcct
    30721 ctagctgagc agctgttgtt gtccctgtaa ctacctgtgt agaatgacca ccaatatcat
    30781 cataagactg aatatccgta tcttttggca cagctaaaac ggatggtgta gaggccgttg
    30841 gataagaata gaggtatttt tcaccacgct cttttgtata ggaagtatta ttccctaaca
    30901 aatcaaagcg tcctgaatcc aagccaggga attgaccgct accatctgtt gtttcaaagg
    30961 tcaattcata ctggtcagaa ccatcaaaga tagctcgagc caattcaata tcaaaccctg
    31021 tcaattctcc attctcatct cgataagaaa aaggcttggt agtcccaaca gttcccatta
    31081 cgatggtttc ttttttatcc gcttctgaag aactagtgtt tgatgagttt gaggtagacg
    31141 agcaagctgc caaagcaact gtcgcaagag ctgtaatacc agccagtgat agaatagttc
    31201 ttaatttcat agtaattctc cttttgtata agcaagtcag acctacaagg tctgcacaaa
    31261 ataatcaaat agcttctgat tgccgccact ttgatcaatc agaagttccg gatgccactg
    31321 gacacccaga aaacgtgtct catccattga tcggacagcc tcaataatac catcatccac
    31381 agaatgcaca atcgcttcta gcccctgacc cagattctct atcgcctggc tgtgaataga
    31441 attgacagct actctctgac caaaaatact agccagaggc gttgcctctt tacattctac
    31501 ctggtgaatc agatcaaaag gcaaggaccg atgcccctct accgcttgtt tgagagttcc
    31561 tccacgtgca acattgaaaa gctgcatccc cctgcaaatc cccaaaatcg gtttttcctg
    31621 tctcaaggct tcgtggacca atttcagttc aaattcgtca cgttccttga aatagtcatc
    31681 gctttcgatg agtttttctt gaccgtaaaa ctgaggtaat acatgttgac cacccgtcag
    31741 taataactta tcaatcgccg acacatagtc gacaacatcc gtttcaccag acaaggggat
    31801 ataaaaagga aggccccccg ctcgcttgat tccatctgca aagttacgag acaacgataa
    31861 attcataatc ggaatcccct ctgcgacagg cttttcatta ctggtgatgc caataatcgg
    31921 tttccccatc ctgccctcct ttcgtaatgt atagacacta tcttatcatg ctctctcttt
    31981 ttcgtatatt ttaaattatt tatagccagc cataaaaaat atttatggat caaaaaaaga
    32041 gcctattctg actcttgttt tctagtccat aaaaagtaca ggttaatagc acaggccact
    32101 aaaatcacag caggccaaag caagttgatg actggaattc tgccaacatt taccgcaaga
    32161 aagaggatat tccacaccac tcccaagcta tagacaatcg tcaaaataat tttcataaaa
    32221 cactccaaca aaatgatagt gctattatac tacaaacgac cgttaatgtc cttgatttgc
    32281 cgctccattt tccgatggtt taggaaaaat agcaaagcgt ataccaaggt aaagataaac
    32341 cagaagaggt agataagttc cttgtccgac aatagaagag gttatgagag aaataatggt
    32401 tccgagaata acacctaaac tgactaaacg gcaaaaaagc cagaacaatt gtcctgactt
    32461 tcattgtctt atattttttt cttcaactcc gccactgcca tcatgacttc cattggggtc
    32521 atattgtaga tgtccagttt ttctaattct ttgaggactg ggtgagaagg tgtgtctgca
    32581 aagaggtcga tttgaccaga cggttctgcc accactgatg gagctggttt tgctggtgca
    32641 gtaggggctt ggttttcaag cgtctgcaaa atcctatccg cccgctgcaa tagctcctct
    32701 ggcattcccg caatcttagc cacatgaatc ccgtaggact tgtcagctgg gccttgtgca
    32761 atcttgtgga ggaaggtgac ttgaccgtcc ttctccaagg tcgacacatg gacattctct
    32821 aagtgttcca aggtctggct aaggtctgtc aactcatggt agtgggtggc aaagagggtc
    32881 ttggctccaa tcttgtcgtg gatatactcg atgatagact gggccagagc catgccgtcg
    32941 taagtggctg ttccccgacc cagctcatca aagagaatta gggactggtc tgtcgccaag
    33001 cggactgcct tgttggcctc catcatctcc accatgaagg tcgattgacc gctgactaga
    33061 tcatctgccg caccgatacg ggtgaagata gcatcgaaaa tcggtaattc agcctgatcc
    33121 gcaggcacat aggaacccat ctgcgccatg atgacgataa ctgccaactg ccgcatatag
    33181 gtagacttac cactcatgtt tggaccagta atcagttgca tatgcgtatc ggtattcaag
    33241 tgaatagagt tgggaatgta ggtctgcttg cccatgacct tctccaccac cgcatgacga
    33301 ccacggttaa tggtcagttc tctttgatct gtaaagcgtg gacaaaccaa atgttgctgc
    33361 tccgccacaa ctgcaaaggc ctgcaaaaca tcgatggtcg caatggtccg agccaacttc
    33421 tgcaagcgac cgatatactt ctcaacctct tggcgaatcc gcatgaaaat ctcgtactcc
    33481 aagttagacg acttatcacg cgcctccaac atctgccctt cgatcttagc caactcttcc
    33541 gttccatagc gctccgagtt tttcaaggtc gccttacgga aaaaatgact aggcacattg
    33601 cccagattgg aattggtcac atggaaataa tagccgtctt ttttgttgta atcaatctta
    33661 agattgttga taccagacgc ttcacgctcc ttggcctcaa cctccgcaat ccagcccgcc
    33721 ccctcacgca taaccagacg gtactggtcc aaggtttcat caaagcccgt gcggatgatg
    33781 ttcccgtctg taatagcccc ttgggcttct gggtcaatag cagagctgat gagagcgtgc
    33841 agttctggga ttgggtccaa tccagccacc agattgccta gagcaggctc attgatttgt
    33901 tgcaagatat tcttgattgc tgggatattt cccaaagtct gggagagctg caagagatcc
    33961 ttgggcatgg tttttccaaa agacactcgg ctggccaaac gttcgatgtc atagacacct
    34021 tttaaagcct cgaccaagtc actccgttca aagaagtaat ccagaaagac ctgtacgaca
    34081 gcctgacgat tctcaatccg cttaaggtca atcaatggac gatcaatcca tgtccgcaat
    34141 agtcgcatac ccatggctgt cttggtttcg tctaacaacc agtacaaact accatgcttc
    34201 ttgcctgtcc gaccgttttc aagcagatcc agactggact tggttgcata gtccatttgc
    34261 agatagtcct tgatttcata atggaccacc ttttgcaagt ggctcagatc tcgcatctga
    34321 gtccgatgta ggtagctgag gagtttacct gccgcagcct tttccaagtc tgtcagcgaa
    34381 ttgtcaatca gctggacgtc ttccgtcacc tcatcctcaa aagagagcag gaggttcatc
    34441 tgattagaaa agacctgctc ttcttcctca gataaagcat agccgatgac caattcacgt
    34501 gctcgtaaat tgcggatttc accgcaaaga ctagtaaaat catccaaact agtcacaaaa
    34561 aactgacctg ttgacacatc catataagaa agtgcgaact gcactccctg acggtcaatc
    34621 gcaaccaaat agttactgtc tgctcccatt ttggacgagt ctgttaccgt accaggcgtg
    34681 atgacctgca ccacttcccg cttgaccacg ccgactgcct gcttaggatc ttccatctgc
    34741 tcagctatag cgaccttatg ccccagttca acaagtgtgt cgatatactg ttgtgccgcg
    34801 tgatacggta cccccgccat aggaatcgga ttttccgcat tcttattacg actggtcaag
    34861 gacaattcca aaatctgtgc cgcttctacc gcatcttcat aaaataattc ataaaagtct
    34921 cccatacgga aaagcaaaaa agcatctgga tagtttgctt ttatatccag atactgctgc
    34981 attcccggag aaattttttc tgttgccatc atctctcctt gttctaattc aaatagtagt
    35041 taatctccgc ttcaacttgc tgagccgcta catcatctcg acaaataact aaaagtgtat
    35101 tagctcccgc cagcgttccc aaaatagtct ctggcttttc tgcatcaatg atattggcca
    35161 tcaaggccgc ttctcccagt tctgaatgaa ggaccagaat aaaactagcc ctatctactt
    35221 tatacgcata ttgtgccaat aattggataa aattcacgcg ctcttcttca atagctaagg
    35281 aataaaatga ttgcccattc tcatgaattt ttatcactcc caactcacgt aaatcacgag
    35341 acaaggttgt ctgggttacc actacccctc gagcctctaa accttgctga atatccgttt
    35401 gtcgccctat tttttcttga cgaatcatgg actttattaa atcatgtcgt cctgctttat
    35461 tcatcatttt acctcaaaat gtatatttat agaaatatta taacactttt ccccgctatt
    35521 agcctagaaa tgtgttaaaa tagaatcaat aactttggag gaaatcctat atgaatcaaa
    35581 aacaagtgat tgcagaaaga ttggctgcca tccttccgag tttggaagtg gaagctatct
    35641 acaatctgct agaaaaacca aaatcatcag aaatgggcga tattgccttc ccagccttct
    35701 cacttgctaa agtggaacgc aaggctccac aggctatcgc agcggacatc gttgaaaaac
    35761 tcgatacaac tggctttgag aaggttgtag ctaccggtcc ttacgtcaac ttcttcttgg
    35821 acaaggctgc gatttcccac caagtcttga cagatgttat tactgaaaaa gaccaatacg
    35881 gtaaactcaa cattggtcaa ggacgcaatg taaccatcga catgtctagc ccaaacattg
    35941 ctaaaccatt ctcagttgga catttgcgct caaccgttat cggtgatgcc cttgctaaca
    36001 tccacgaaaa gctaggctac aagccaatcc gcatcaacca cttgggtgac tggggtaaac
    36061 aatttggtat gttgattgtt gcctacaaac tttggggtga caaggctgcg gtcgaagcag
    36121 acccaatttc agaactcctc aaactctatg tgcgtatcaa tgctgaggcg gaagagaagc
    36181 ctgagttgga cgacgaagca cgtcaatggt tcaaaaaatt ggaagatggc gatccagaag
    36241 cacacgagct atggcaatgg ttccgtgatg aaagcttggt cgaattcaac cgcatttacg
    36301 acaaactcga tgtaactttc gacagctata atggcgaagc cttctacaac gataagatgg
    36361 acgaaggtat ccaaatctta gaagaaaaag gacttcttca agaatctaaa ggcgcgagaa
    36421 tcgttgacct tgagagctac aatctgccac cagccctcat catgaaaaca gacggggcaa
    36481 cactttacat cacacgtgac atggcaacag ctatgtaccg caaacgcact tacgactttg
    36541 tgaaaagcat ctatgtcgtt ggtcaggagc aaatcaacca cttcaaacaa ctaaaggctg
    36601 tcttgaaaga aatggatttc gactggagcg acgatatgac ccatgttacc ttcggtctgg
    36661 ttaccaagga caagaaaaag ctatccactc gtaaaggaaa tatcatccta cttgagccaa
    36721 ctctagatga agctatttca cgcgccctta ctcaaatcga agctaaaaac cctgaccttg
    36781 aaaacaagga agaagtggcg cacgcagtcg gtgtcggcgc tgttaagttc tacgacctca
    36841 aaaccgaccg tgacaacggc tacgacttcg acctagaagc tatggtttcc ttcgaaggcg
    36901 aaacaggtcc ttatgtacaa tacgcatacg cccgcatcca gtctatctta cgcaaagcca
    36961 actttgtacc aaacgcagaa aatgactaca aactggctga tgcagaaagc tgggacatca
    37021 tcaagcacat ccaaaacttc tcaaacgttg tagaacgtgc tggtgacaaa tttgacccat
    37081 cacttatcgc caaatacgct atcaacctag ctcaagcctt caacaagtac tacgcacaca
    37141 ctcgtatctt ggatgaaagc ccagagcgtg acagccgtct agcacttgcc tacgcaacag
    37201 gacttgtcct caaagaagct ctacgtcttc tcggcgtaaa agcaccagaa aaaatgtaat
    37261 caaagccttc ggccatcagc cgaggctttt tttctaccac attgcctact ctcgttgccg
    37321 attccttatc acaacaactc cttatcacaa atgaaaatca aaaagattca tttcaattac
    37381 gaatatatag atgggaggta cacgtgatac ctctacatct actacacaag gagaaataat
    37441 gaaaacattc ttgagaagaa aaggaatcgc ctgtcagctt ctagccgcca tttttattgt
    37501 cggtatcaat ttacaatccc caccttcagc ctcagccaat gcaagaggag atgactatcc
    37561 ctacacagca gttgatgcag tcgatccatg gagactctac acccgtcaat gtacttcttt
    37621 tgtagccttt cgcctcagta aagtcaacgg ttttgaaatc ccaccagctt acggtaatgc
    37681 ggatgtctgg ggataccgag cgcagcgtga agggtatcgc gtggatatga gccctgccgt
    37741 gggatcagta gcttggtggg aaactcccat gcatgtcgca tgggtttctg cagtaaatgg
    37801 agataccgta gagattgagg aatacaacta cggtgttcgc tatacctacg gaaggcgagt
    37861 tatccccaaa aatgccgtta gcggctacat tcattttaaa aacctcggag cgggaacaac
    37921 caactctcaa cccgccgtag ccccaagcgg cacctatact tttaccagcc aactggccat
    37981 caaatctcaa gctagtctat ctagtcctac cctcgattac tattatgctg gcgaaagcgt
    38041 ccgttacgac aaggttctcg aagccgacgg acaacgctgg attagctata tcagctattc
    38101 tggagctcgg cgctatatcg ccatccagcc taccattact caatctacaa acaacagcct
    38161 accagcatca ggtagctaca ccatccagtc ctactctagt gtccgcaaca atccaagtct
    38221 gtccagtcct gaaatcacct tctacggagc tggctcagtc gttcgctatg ataaagttat
    38281 tactgccgaa ggtcgcacat ggattagcta tatcagttac tcaggtgctc gacgctacat
    38341 cgccatctcc taatcacaaa aaagacaata tttaaaagca caatcttttt agactgtgct
    38401 ttttcattaa atatctgtcg aattaatagc tgtgcttggt ttttcctttg gtttacgcag
    38461 atggaagaag acggtcacac caaagtaaat ggcaaatagg acaactcgaa taatataatt
    38521 catcattgcc tgcgcctcta ctgactgacg cataactgaa tcagtataaa tttgactcaa
    38581 ccctttctca ccaataaaag cataggtcga aaataggaga gttacaaaaa gataacccag
    38641 gtaggtataa gaagcctgct catttttctt gaggaaaagc agcacaatcg tcgcaatcac
    38701 agcaagtaat aacacaactg caaatgcctt attgacaaga ttcgtttgga aattgacaga
    38761 ctctctcata taggtaaaat atacctcatc aagcccctct acattaaaat tctgcaacaa
    38821 ttgacgcaca acagcctcat cgtacttcgc aaaaaataca ttaaagccac gtaatacgct
    38881 cgcaatagat gacagtacaa caaaaatata caaatgaatc ggtcttttca taatagcctc
    38941 cttttttcta tattttatac tcatattttt gtattgtcaa tcatatattt cattttacta
    39001 caaatataat tttgttatac taaatttaaa ggaggaaaac tcatgaagaa attacccacc
    39061 tatatcggag tgattatttt tgtagttacg ctactgatta actggttatt accaagtctt
    39121 gctaaagtgc tgaatacttt tttcatttgg actatcgtag cctgcctact ctacaccatc
    39181 tactactgga ttcgctactg gctctatgtc cgtaaacaga gataacaaag actcctctaa
    39241 gttagctact tagaggagtt cattttattc tgacttttca tcaaccaaat gcacattaac
    39301 ccgacgatag gtttctgtaa ggtctagcaa ttccgcttca atctctggtg tcaattgatc
    39361 tgccgtcatt ctccaagtcc agttaccacc aagtgtattt ggcaagttca tacgagccga
    39421 accatccaaa ccaagtaggt cctgcatagt agccaccgcc ataaaggcag gtgaaccaaa
    39481 gagcaggcgg aaaagagcat gactgaccgt ttcgccctca cgacgattgc tgtacttatc
    39541 taagaatgca cgcgattctt tcgttgtttc attttcgtac cagccaagaa tcgtatcatt
    39601 gtcatgggtt cccgtatatg ccaccacatt attaggatgg ttatgcggca tttcaatgct
    39661 gtctccttct ggatcaaaag caaactgcag gactttcata ccaggaaaac ctgttgtatc
    39721 acgtaattgg atgaccttgt ctgtcacaga gcccaaatcc tcagctatga tatttaagtc
    39781 tccgagttca cgtttgattg tatcaaataa ttcaaaacct ggtgcttcga cacgatagcc
    39841 atttacagct gtttcttcac ccgctggaat ttcccagaag gaggcaaagc cgataaagtg
    39901 gtcgatacgt accatatcgt atatcttaaa ggattcacgt aaacgagcaa cccaccaagt
    39961 aaatccatca tgcttcatcg cttcccaatc ataaatcgga ttgccccaaa gctgaccaat
    40021 ttccgaaaag gcatctggtg ggcatcctgc aaccacactc ggcttgcctt cttcatccgt
    40081 tttaaagaaa tgtggattag cccacatatc ggcagaatca gccgcgatat aaatcggcat
    40141 atccccaaca aactcaacac ctttggcatt ggcataagcc tttaaagcct tccattgtga
    40201 aaagaataaa tattgtgtaa tgcggtgata atcaatttga tctgccaaca agtgacgata
    40261 atattccaag gtatcgtggt aacgtaagcg cgccccttga tcttcccact ctgtccaagg
    40321 tttgagatca aaatgctctt ttatagccat atactccgca aaggtatgaa tccaaaagtc
    40381 attttcccct aagaacatcc agtaatcttc tggcaagcct tgtgccttca tgttggcaac
    40441 taccttctcc agtaatggac ggcgagcata aaaaatggct gcgtaatcta cctctgtagg
    40501 attctgccca aagtcaacac cgtgtaaatc ctctgctgcc agccagcctt tatcaatcaa
    40561 tatatcgaaa tcaataaaat gagtattccc tgcaaaagct gaaaatgact ggtaaggaga
    40621 atctccataa ctggttgttc ccaaaggtaa gatttgccaa tagcgttgct tagttcttac
    40681 caaaaaatca acaaattcat aagccgattg tcccatggaa ccaattccat atttccctgg
    40741 taatgatgaa atgtgcatca gcacaccact ctgtcttact ttcataagtt ctcctatcta
    40801 atccgcttac acgacgcaaa cgttttctct ttttcattat atactgaaaa cggtaacaaa
    40861 tcaaggaatt ttcctttaat tctgttcgtt cctataccat tccatatttc tcttcattat
    40921 atatacaaaa aaattatata caaaaaaatt cttatgtttt ttaaaactca aaaaaatttt
    40981 taaatttttt ataaaaacgc ttgcaaacgg attcaatctg gtgtataatg aagtcaactc
    41041 gggaaaacgt ttgcgcaatg cagacgtcac acaaaactat ttatcttcgg agggaagaaa
    41101 atgaaataca atctccttaa gagcgttgct cttcttgctg catcaactgc tgttttagct
    41161 gcttgctcaa actcaggttc atcaacagag gcatctaagt ctgctgaagg tagcaaagaa
    41221 ttgactgtct acgttgacca aggttatgaa tcttatatca acgacgtcaa agctgacttc
    41281 gaaaaagaaa atggtgtgac tgttacagtt aaaactggtg atgctttgac tggtttggat
    41341 aacttgtcat tggacaacca atctggttca gctccagacg ttatgatggc accatacgac
    41401 cgtgtaggta gccttggttc tgaaggtcaa ttatctgaat tgacacttgc agatgatagc
    41461 aaagcagatg acacaacaac tgctcttgta acaaacggtg gtaaagttta cggttcacct
    41521 gcggttatcg aaacacttgt tctttactac aacaaagact tgttgactga agctcctaag
    41581 acatttgcag aacttgaaac acttgctaaa gacagcaaat acgcatttgc tggtgaagag
    41641 ggtaaaactt cagcattcct agctgactgg acgaatttct actatacata cggacttctt
    41701 tctggttacg gcggctatgt attcggtgaa aatggtacaa atccaaaaga catcggactt
    41761 gctaatgaag gtgccatcaa agcaattgaa tacgctaaaa cttggtacga aaaatggcct
    41821 caaggtcttc aagacggtac tgctgcaaac aacttgatta acactcaatt tacagacggt
    41881 aaagcagctg ctatcatcga aggtccttgg aaagcagctt catataaaga agctggtgta
    41941 aactatggtg tagcaacaat accaactctt gtaaacggca aaaactactc agcattcggt
    42001 ggtggtaaag catgggttgt tccagcaggc gctaaaaacc aagaaatggc tcaaaagttt
    42061 gttgacttct tgactgctac agaccaacaa aaagcacttt acgacgctac aaacgaagtt
    42121 ccagctaaca ctgaagctcg tgaatatgct gtaagcaaaa aagacgaatt gacaactgca
    42181 gttatcaacc agtttgcttc agctcaacca atgccaaaca tctcagaaat gggttcagtt
    42241 tggacaccag ctggtaacat gctcttcgaa gctgcaagtg gttcaaaaga cgctaagact
    42301 gctgcaacag atgctgtgaa agctattgca gacgaaattg ctcaaaaaca cagcaactag
    42361 tcaagtttaa agttggactg ggagttctct tcccagtcta ctttattact taacgataaa
    42421 ctgaatagat atagtctttt agtttacttt tagtacgagg caatgagccg caggcataac
    42481 tgaagttagg caaggcgagt taacgaagta ataaaagaaa aactaaatga cgataacatc
    42541 caccgtctat tcagaagcta tataaggaga ctatgactat gaaacaaaat ccaggtaagg
    42601 cactcctttt gtccctgatc cctggtctcg gacaaatcta caataaacaa aaagccaaag
    42661 gatacatctt tttaggtgtt acgcttgcct tccttgttta ttttattgct attgcagctg
    42721 gtgaattagg caacttgatt actctcggta gtgttcgtgg acaagataat tcgctattca
    42781 tgctgattcg tggttctttc cacttaatta tcacagttgt ctatctcgct ttctatgcac
    42841 tcaacctaaa agacgcacgt gataccgcga aacgatggaa ttcagggatg ccagtggcta
    42901 ccacattaaa agaaatggta aaaggtatct atgagaatgg tttcccatat ctcttgatta
    42961 tcccatcata tattgcgatg acctttgcta tcatcttccc agttgtcgtt acattgttta
    43021 tcgcctttac aaactacgac ttcaaacacc tgccaccaag cgcattgttg gattggattg
    43081 gtattaccaa ctttacaaat atctggaaac taagcacatt ccgtacagca tttggttctg
    43141 tacttggctg gacaattatc tgggcactct gcgcttcaac agctcaaatt gttatcggta
    43201 tcttgacagc catcatcgca aatcaaccat tcatcaaagg aaaacgtatc ttcggtgtta
    43261 tcttcttgct cccatgggct gttccggcct tcgtaactat cttgactttt agtaacatgt
    43321 tcaacgatag tgtcggcgct attaacacac aggtattgcc attcctgagc aaattcctac
    43381 cattcatcga caatttcctt atcccttgga agaccgaccc attctggact aaagttgctc
    43441 tcattatgat gcaggcttgg cttggtttcc cttatatcta tgttttgacc ttgggtattt
    43501 tgcaatccat tccaaacgac ttgtatgaag ctgcttacat tgatggtgca agtgccattc
    43561 aaaaattccg taacatcacc cttccgatga ttttagcagt agcagctcca acactaatca
    43621 gccaatacac cttcaacttc aacaacttct ctatcatcta cctcttcaac aatggtggtc
    43681 ctggtagcgt cggtggtgga gcgggttcaa ctgacatctt gatttcatgg atttataaat
    43741 taaccacagg tacatcacct caatactcaa tggcggcagc agttacattg attatctcaa
    43801 tgattgtcat cagtatttcc atgattgcct tcaaaaaact aaatgctttt gaaatggagg
    43861 atgtataaga tgaaagtatc tgtaaagact agacgcatac tcaatcagac cttaacctat
    43921 ctctatctga ttgttctgtc tgttatcatc atctatcctc tcttgattac aatcatgtcc
    43981 gccttcaagt ctggtaacgt ggttgccttc aaattggata gcaatatcaa ctttacacta
    44041 gacaatttta gcaagctctt tagcgagact ctatacggaa cctggtactt caatacgctt
    44101 atcattgctc tcttgacaat ggttattcaa acaagtatag tggtactagc gggttacgct
    44161 tatagtcgct ataacttcat cgctcgtaag cagagtttgg tcttcttctt gattatccaa
    44221 atggtaccaa ccatggctgc tcttaccgcc ttcttcgtta tggccctcat gctcaatgcg
    44281 ctcaaccaaa gctggttcct catcttcctt tatgtcggtg gtggtatccc aatgaacgct
    44341 tggctcatga aaggctactt cgatacggtg ccaatctcac ttgatgaatc tgcaaaacta
    44401 gacggtgccg gtcacttcag acgtttctgg caaatcgtcc tcccactcgt tcgtccaatg
    44461 attgctgtac aagcgctctg ggccttcatg ggaccttttg gagattacat cctatccaaa
    44521 ttcttgcttc gtgaaaaaga attctatact gtagctgtcg gacttcaaac cttcatcagt
    44581 gatgtgaaga atatgaagat tgcctacttt gcggcaggtg ccattcttat tgccctccct
    44641 atcagtatcc tattcttctt cctacaaaag aactttgtat ctggtttaac aagcggtggc
    44701 gacaagggat aaccctgtcc caccttttcc ctttttaggg gaaacattga tatttatgaa
    44761 aggtccaacg aatgctccca tatccttttt cctatttttc tagtatcttc tctccaagaa
    44821 atatgtttgc caatcgtaga ctaatgaacc tttggcaacg gttgtttaca acgctttttt
    44881 tagtggcgct cttgctcatt ccgagctccc tacagactgt caatctcgaa acctatcctt
    44941 tagaaaattt cgtagaaggt gtctatgcac ctctgacaga tcaggtcgta gatgacctcc
    45001 gtcaatatgc agtcattgaa aacaaccacc taacctatac tggaaatact aactgggagc
    45061 aagtgacatt tggtgatacc gttagctcta gttctgactt tacttatcaa ttcgccaatc
    45121 agtctctgac tattcgtaaa ggaagtgata ttctaagcga attgacttat gaaggtttga
    45181 atactgacga ttttgctagt aaggagacct tgactgcaac catctctaaa aaatggtatc
    45241 aagccaaccg agcagctgtc ggactgtcca tcactcttat ttcgaccttt attttaacaa
    45301 caaaactact cttcatccta ctaggagcca gcttcttcct ctttttgact aaaaagtctc
    45361 gtttcttcca ttttgaaacg tttgcagagt gctataattt tgctctcaac tgtctgggcc
    45421 tgcctactct tatagcctgt ctaattggac tatttggtca acctgtgact acccttctaa
    45481 ccatacaaaa tatcctattt gtgctatgct tgttatgggt atttttcaaa acaaaattca
    45541 gagatgaaat ctaggaggtc tatatgcgtg ctaccatcaa agatgtggcc aaattagctg
    45601 gtgtctcgcc atctacagtt actcgtgtca ttcaaaatag ctctgccatt agccaaaaaa
    45661 cgaaagactt ggttaggaaa gccatggcgg atctcaacta ccatccaaac ctcaacgctc
    45721 gaagcctagt ttctagctat acacaggtta tcggactggt tttgccagat gactcggatg
    45781 ttttctatca aaaccccttc ttccctactg ccttacgagg aatttctcaa gttgcggcag
    45841 atcataatta tgccatccaa atctccacag gaaagaatga agaacaacgt ctagaagcga
    45901 tttctcagat ggtctacggc aaacgagtgg acggcctcat cttcctctat tccaagcccg
    45961 acgatccatt ggtacaatta gctatccaac acaaattccc cttcctcatt cttggtaagg
    46021 cggattctcc attcatatca ctagttgata atgataatat ccaggccggc tttgaagcta
    46081 ccaactactt catcaataaa ggttacaaaa acattgcctt cgtcgctggt aacaaagagt
    46141 tagtcgtatc tcaagaccgt tatacaggtt acaagaacgc ccttaaatcg cacaatattc
    46201 ccctggatga aaacaaggtc aagtttgtgt ctggcttcct tctcgaagac agtgcctaca
    46261 aaatttctaa gaaattactc aaacaagacc tggatgcaat cgtcacaact gacacttccg
    46321 ttgccgaagg tgttgtcaaa tatctcaacg aagtcggagt caaacttcct atcatttctt
    46381 ttgactccgt caagccaaaa ctagatattg aagcctacgt tgacgtccac gctattaaac
    46441 taggacgcgt cgcattcaac actctgcacc aaatcatcaa tgacaacaag gaagacaagc
    46501 aagtctgcta ccgacgtgtc attccacata ccattaccga actctaactt agaaaggagc
    46561 cttttggctc atggcattac gacaatttca agcatctctt gacgatgtag caactattcg
    46621 cttggtcatg gaaaaacgat tcgactccga acatatgagc ttctcacttg aatcaaatga
    46681 tgctacatct caacttttta tccattcctg tctagaagta gataatctcg tcatctatta
    46741 tctaaccagc ctccatgcac tgacattgga caaggactat accatctacg accaagaccg
    46801 taataaaaca gaactcggct atggtcatat cgttcgctct acactttttg aacaaagtta
    46861 tacatacaat gggcaagact tgggagcaac ctatcgacca gaggcaacaa cctttaagtt
    46921 atgggcacct atttctaagc aagtttttct tgttctagaa ggaaacccac atgcaatgac
    46981 gaagggagca aagggagttt gggaaattac tgttgaagga gacctagaag cgcacagcta
    47041 tcactatctc cacaaagtaa acagtgaatg gatttccgtt cacgatccct acgccctgtc
    47101 ttccacagcc aactcaggtg acagctacgt tatcaatcca gataaacttc ataaaattcg
    47161 tcgtgctaag acccaacgac ctatttctca ggccattatc tatgaaatga gcgtccgtga
    47221 tttctcatgg caaaaagaag ctgggttcaa gcatcgcagt caatttctcg gattgacaga
    47281 atctcctacc atggatggaa tgaagctagg aatggattac atcagagaac taggcgttac
    47341 ccatattcaa ttattgcctg tttatgattt tggcagtgtg gatgaaaata aaccccaagc
    47401 tgtttacaac tggggctacg accctatgca atacaatcta ccagaaggtt cctattctag
    47461 ccaaccaaac gatccttacg cacgtattct agagctacaa gaagctatcc aggcctacca
    47521 tgatgcagat atttcagtta ttatggacgt tgtttacaac cacgtctatc atgctgaaaa
    47581 gtacgcattt gagctcatcg ttccaggcta cttctatcgc tatgatgacc acggcatgcg
    47641 aacagacggg acattctgcg gtaacgacgt tgccagcgag cgcagtatgg tccgcaacta
    47701 catcaaacaa tcccttcgcc aatggctaga actctatggt tttgatggct tccgtttcga
    47761 ccttatgggt attttagata gcgaaacaat caaccagatt caaattgaat tatctgccat
    47821 tcacccaaat gtctacctct atggtgaagg atggaaaatg gcaacaggcc tcgaatttga
    47881 aaagctggct caccagtaca atgcggagca gttacctgaa atcagcttct tcaatgacga
    47941 ctaccgtgat acctttaaga aactcttgct caatccaaac cgtctagtag ataagcaatt
    48001 gcacgaaaag gtacaacatc tcctgactgg tagccgatta agccatttct taacacctca
    48061 acagtccctc aactacatcg aatgccatga taatgctaca gcatttgact atttccatat
    48121 tgagaatcca aactggacac ctcaacagca gaaacgtgct gcaagttttg gtctccagct
    48181 catcttaatc tctcagggta tggccttcat tcacagcgga caggaatttt tccgtacaaa
    48241 agatgaaata gataatactt acaatgtccc tgaccgtatc aaccatctgg actggacacg
    48301 agctattcgt tataaggaac atatcgagtt cattcaggaa ttaattacct tccgaaaaaa
    48361 taatccaata ctcagccagg ataactacga aagtatccaa gaaacttgtg atttctactg
    48421 gttaactgaa tatgttcttc gctatcaagt gacaagtgaa gaaaagacca ttcaatttat
    48481 catcaacttt gcggatagcg actttaccta tgaacgtgaa aaagataagg cagttctcta
    48541 caactatcct ccagtcgaag agcgtgatca gcaagaaatc acgattgcag gacagagtat
    48601 ttgcatttta gaagacaaat aggactttag accgatgaaa cacgatatag tctgaggtat
    48661 actatagaca atatgtaaag acccccagtt gagaattcgt ggatttacct gtacactaga
    48721 at
//
LOCUS       DASFQD010000003        47416 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.003, whole genome shotgun sequence.
ACCESSION   DASFQD010000003 DASFQD010000000
VERSION     DASFQD010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 47416)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 47416)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47416
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.003"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(64..1479)
                     /gene="sufB"
                     /locus_tag="U1021_000098"
     CDS             complement(64..1479)
                     /gene="sufB"
                     /locus_tag="U1021_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016397186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HEM4710697.1"
                     /translation="MSEERIEPTPIDLGEYKFGFHDENVELVASTGRGLSEDVIREMS
                     RIKGEPEWMLEFRLKSYQTFKKMPMQTWGADLSELDFDDIVYYQKPSDKPARSWDDVP
                     DKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEYDKHGIIFTDTDTALKEHP
                     ELFKKYFGKLVPPSDNKLAALNSAVWSGGTFIYVPKGVKLDIPLQTYFRINNEGTGQF
                     ERTLIIVDEGASVHYVEGCTAPTYSTASLHAAIVEIIAHEGAYMRYTTIQNWSDNVYN
                     LVTKRARAEKNATVEWIDGNLGAKTTMKYPAVYLEGEGARGTMLSIAFANKGQVQDTG
                     AKMIHNAPRTSSSIVSKSIARGGGEVNYRGQVTFAKNSAKSISHIECDTIIMDDISKS
                     DTIPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKEL
                     PMEYAVELNRLIAYEMEGSVG"
     gene            complement(1933..2373)
                     /locus_tag="U1021_000099"
     CDS             complement(1933..2373)
                     /locus_tag="U1021_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HEM4710698.1"
                     /translation="MALSRLDSLYMAVVSEHSKSPRHRGSLDGVEKLELHNPTCGDVI
                     ELSVKIEKDVITDIAFDGVGCTISTASASMMTEAVLGKEISQIQELAEIFSQMVQGQE
                     DTRQKELGDASLLAGVAKFPQRIKCATLPWNALKKALERSESAD"
     gene            complement(2360..3583)
                     /locus_tag="U1021_000100"
     CDS             complement(2360..3583)
                     /locus_tag="U1021_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001020754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEM4710699.1"
                     /translation="MDFERIRKDFPILDQVVNDESLVYLDNAATTQKPQQVLDVLADY
                     YQKDNANVHRGVHTLSERATARYEAARQKVADFIQAKSSKEILFTRGTTTGLNWVAQF
                     AREILQPDQEVIISVQEHHSNIIPWQQACQQTGAKLRYVTLKDGELDMDHLRSLLSSK
                     TKFVSLAHVSNVLGSVAPIGKIAELVHQVGAYLVVDGAQSVPHMAVNVQELDVDFYAF
                     SGHKMLGPTGIGVLYGKEELLNRMSPVEFGGEMIDFVYEQTATWKELPWKFEAGTPNI
                     AGAIGLGAAIDYLTEIGMDAIQAHEAELVDYVFPKLQAIPGLTIYGSQDLSKRTGVIA
                     FNLDDLHPHDVATALDYEGVAVRAGHHCAQPLLRYLQVPATVRASFYIYNTKADCDKL
                     VEAIIKTKEFFNGPI"
     gene            complement(3588..4850)
                     /gene="sufD"
                     /locus_tag="U1021_000101"
     CDS             complement(3588..4850)
                     /gene="sufD"
                     /locus_tag="U1021_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013989976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HEM4710700.1"
                     /translation="MTKEKIQEFSALQAEPTWLTDLRLKAFDKIAELDLPVIERVKFH
                     RWNLGDGSLATNDEIGAVPDFTAIGDNPMLVQVGSQTVLEQLPADLVEKGVVFTDFAS
                     AMDLIPDVIEKYLGVAVAYDEHKLAAYNTAYFNATAVLYVPDNVEIDQPVEALFYQDS
                     TSPVAFNKRVLIIAGKNAKLNYLERFESLGDGAVATSANIVVEVIALAGSQIKFAAID
                     RLGKHLDTYLNRRGYLGNDATIDWAIGLLNEGNVIADLDSELKGNGSHANLKVVGLSS
                     GRQVQGVDTRVTNYGHNSVGHILQHGVILESGTLTFNGIGHIVRGAKGADAQQESRVL
                     MLSDKARSDANPILLIDENEVTAGHAASIGQVDPEDMYYLMSRGLDRATAERLVVRGF
                     LGAVITEIPVKEVRDQLIAVIEEKLVKR"
     gene            complement(4867..5640)
                     /gene="sufC"
                     /locus_tag="U1021_000102"
     CDS             complement(4867..5640)
                     /gene="sufC"
                     /locus_tag="U1021_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HEM4710701.1"
                     /translation="MSVLEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKST
                     LSAAIMGNPSYEVTQGEVLFDGVNILELEVDERARMGLFLAMQYPSEIPGITNAEFLR
                     AAMNAGKEDEDKISVRDFITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLL
                     MLEPTFALLDEIDSGLDIDALKVVSKGINAMRGEGFGAMIITHYQRLLNYITPDVVHV
                     MMEGRVVLSGGPELAQRLEKEGYVQVAAELGIDYKEDDI"
     gene            complement(6310..7482)
                     /locus_tag="U1021_000103"
     CDS             complement(6310..7482)
                     /locus_tag="U1021_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl/decaprenyl-phosphate
                     alpha-N-acetylglucosaminyl 1-phosphate transferase"
                     /protein_id="HEM4710702.1"
                     /translation="MIPFALKYIMVIITTMVISAIATPLVRFMSLKVGAVDNPNARRI
                     NKVPMPSAGGLAIFVAFTISVLGFLPGIVTRVNYHGTYLHYIWPLVLASSIIVLTGFI
                     DDVKELKPAPKMFGILAAATIIWIFTEFRFDSFKIPFGGPFLQFPVWLSFLLTVLWIV
                     SITNAVNLIDGLDGLVSGVSIISLTTMGIVSYFFLNDSNIFLTLTIFVLVAAIVGFLP
                     YNYNPAIIYLGDTGALFIGFMIGVLSLQGLKNSTAVAVVTPMIILGVPITDTVVAIIR
                     RKLSGQKIYEADKMHLHHRLLSLGLTHRGTVLVIYAISFLFSLTSLLLNVSSRIGGIL
                     LLVTMGLGIEILCELIGIFGINRTPLLNLLRFIGNSSYRQEKIAKYKKCCEEKKRK"
     gene            complement(7479..8201)
                     /gene="mecA"
                     /locus_tag="U1021_000104"
     CDS             complement(7479..8201)
                     /gene="mecA"
                     /locus_tag="U1021_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adaptor protein MecA"
                     /protein_id="HEM4710703.1"
                     /translation="MKVKQISDSTLKITIKLDDLEERGMELSDFLIPQEKTEEFFYTV
                     LDELDLPMTFRESGMLSFRVTPKPDRVDIFVTKSDLDQSLNFDEFTDFSELGDVASMT
                     PDEFFKSLEQTVREKSTPDATAVRHLEEVEQEEEADEEEQERYIYYILEFPTIEDLFT
                     FVGTVDYPVEESELYKMDGHYYLTVLINVENRSKQYPGYILSRMLEFTNDTKLTRPAL
                     QEHGTLMLPLAAIEELRKVPTV"
     gene            complement(8329..9165)
                     /locus_tag="U1021_000105"
     CDS             complement(8329..9165)
                     /locus_tag="U1021_000105"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEM4710704.1"
                     /translation="MLLELLKAIFLGIIEGVTEWLPVSSTGHLILVQEFVKLNQSKNF
                     LEMFNIVIQLGAILAVMTIYFKKLNPFQPGKTKRDIQLTWQLWAKVVIACIPSILIAV
                     PLDNWFEAHFNFMVPIAIALIVYGIAFIWIENRNSGVEPQVTDLAKMSYKTALLIGCF
                     QVLSIVPGTSRSGATILGAIILGTSRSVAADFTFFLGIPTMFGYSGLKAVKYFLDGNS
                     LNMEQVWILLVASVTAYLVSLVVIRFLTDFVKKHDFTVFGYYRIILGAILLVYAFITF
                     LF"
     gene            9292..10857
                     /locus_tag="U1021_000106"
     CDS             9292..10857
                     /locus_tag="U1021_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding
                     protein/permease"
                     /protein_id="HEM4710705.1"
                     /translation="MKRKLSIFLLTLIAVFSVTTGVRADEYLRVGMEAAYAPFNWTQE
                     DDSNGAVPIEGTNQFANGYDVQVAKKIAASMDKELLVVKTKWEGLVPALTSGKIDMII
                     AGMSPTEERKKEIAFSDSYYTSIPTLVVRSDSQYANATSLADFAGAKITAQQGVYLYD
                     LIDQIEGANKQTAMGDFSQIRQALESGIIDAYVSERPEGRTAEAANKAFKMVELADSF
                     ETNAEDVTIAVGMRKDDERIAQVNEVLATISEEEQIALMDDMIENQPVEEASEGETPS
                     FFAQVWNIVVNNWQQLLRGTGMTLLISILGTIIGTAIGLLIGVFRTAPKAANKALAIG
                     QKVLGWIINIYIEIFRGTPMIVQSMVIYYGTAQAFGLNLDRTLAAIFIVSINTGAYMS
                     EIVRGGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFVINIKDTSV
                     LNVISVVELYFSGNTVATQTYQYFQTFTVIAIIYFILTFTVTRILRTVEKHFDTDTYT
                     TGANQMQVEVPHD"
     gene            10850..11593
                     /locus_tag="U1021_000107"
     CDS             10850..11593
                     /locus_tag="U1021_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002886432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM4710706.1"
                     /translation="MTKNVILEINNLKKSYGQNQVLKDISISVEKGEVISIIGSSGSG
                     KSTFLRSINLLETPTEGQILYHGQDVLAKGYDLTTYREKLGMVFQSFNLFNNLNVLEN
                     AIVAQTTVLKRDRAEAEKIAKENLNKVGMTEQYWQAKPSQLSGGQKQRVAIARALSVD
                     PEVILFDEPTSALDPEMVGEVLKTMQDLAKSGLTMLIVTHEMEFARDVSDRVIFMDKG
                     VIAEEGSPQQIFENPQEERTREFLQRFLG"
     gene            complement(11720..11929)
                     /locus_tag="U1021_000108"
     CDS             complement(11720..11929)
                     /locus_tag="U1021_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710707.1"
                     /translation="MTSYEKVAAVVGWVREKKITGYRISKETNAREMSVIALAQGRAK
                     IDNISFATALGLIDFYDKNHKKFEN"
     gene            complement(12015..12917)
                     /locus_tag="U1021_000109"
     CDS             complement(12015..12917)
                     /locus_tag="U1021_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEM4710708.1"
                     /translation="MVLGPIVFIGGFLFFVLIALILIASGLYVVKQQTVAIIERFGKY
                     QKTSTSGINFKIPFGVDVIAARIQLRMLQSEIVVETKTQDNVFVTMNVATQYRVNENN
                     VTDAYYKLMHPEAQIKSYIEDALRSSVPKLTLDELFEKKDEIALEVQKQVAEEMSTYG
                     YVIVKTLITKVEPDAEVKQSMNEINAAQRKRVAAQELAEADKIKIVTAAEAEAEKDRL
                     HGVGIAQQRKAIVDGLADSIRELKESNVSLSEEQIMSILLTNQYLDTLNNFAQGGNQT
                     IFLPGNPEGVEDIRTQILSSLRAK"
     gene            complement(12927..14177)
                     /gene="ilvA"
                     /locus_tag="U1021_000110"
     CDS             complement(12927..14177)
                     /gene="ilvA"
                     /locus_tag="U1021_000110"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019322143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase IlvA"
                     /protein_id="HEM4710709.1"
                     /translation="MITAKNVEQAYSVLKRVVVRTPLDYSRYLSEKYGATIYLKRENE
                     QRVRSFKIRGAYYAISQLTDDEKSRGVVCASAGNHAQGVAYTCQEMQIPATIFMPITT
                     PQQKIGQVKFFGGDYVEIRLVGDTFDESAKAAQDYTQESGKTFIDPFDDENVQAGQGT
                     VAYEILEEAEEQTISFDQILVPIGGGGLVAGVSAYLKEHAPEIKIVGVEASGARSMKA
                     AFDKGRPVKLDQIDKFADGIAVQKVGKSTYEVARKYVDRLIGVDEGWISGTILDLYSK
                     LGIVAEPAGAATIAALEVVKDQIKGQTICCIISGGNNDINRMPEMEERALIYEGIKHY
                     FVVNFPQRPGALREFVNDILGPNDDITRFEYIKRANKGTGPVLIGIALGDKTDYTQFI
                     SRLEEFDPQYINLHENDSLYKMLV"
     gene            complement(14472..15494)
                     /gene="ilvC"
                     /locus_tag="U1021_000111"
     CDS             complement(14472..15494)
                     /gene="ilvC"
                     /locus_tag="U1021_000111"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006145054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEM4710710.1"
                     /translation="MTVTMQYEKDVTVAALDGKRIAVIGYGSQGHAHAQNLRDTGHDV
                     IIGVRAGKSFDKAKEDGFETFEVAEAAKQADVIMILAPDEIQADLYNDEIAPNLEAGN
                     ALGFAHGFNVHFEFIKVPADVDVFMCAPKGPGHLVRRTFEEGFGVPALYAVYQDATGN
                     AKHIAMDWAKGVGSARVGLLETTFKEETEEDLFGEQAVLCGGLTALMQAGFEVLTEAG
                     YAPELAYFEVLHEMKLIVDLVYEGGFKKMRQSISNTAEFGDYVSGPRVITDQVKENMK
                     AVLADIQSGKFANDFVNDYKAGRPRMEAYRKEAENLEIEKVGAELRKAMPFVGRNDDD
                     AFKIYN"
     gene            complement(15635..16111)
                     /gene="ilvN"
                     /locus_tag="U1021_000112"
     CDS             complement(15635..16111)
                     /gene="ilvN"
                     /locus_tag="U1021_000112"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002927678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEM4710711.1"
                     /translation="MRRMLTAKLRNSSGVLNRFTGVLSRRQINIESISVGPTEVDGIS
                     RVTVIVDVASHDEVEQIIKQLNRLIDVVRVRDLTDIPHLEREVILVKISAPPTKRAEI
                     LAIIQPFRANVVDVAPHSITIQMTGDGDKIDALLRVIQPYGIKNIARTGATGFSRD"
     gene            complement(16104..17807)
                     /locus_tag="U1021_000113"
     CDS             complement(16104..17807)
                     /locus_tag="U1021_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019803125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HEM4710712.1"
                     /translation="MQEIQLDQPRSGSYLILDTLHQLGVDLVFGYPGGAVLPLYDAIY
                     QYEGIQHILARHEQGAVHEAEGYAKSSGKVGVAIVTSGPGATNAITGIADAMGDSVPL
                     LVFTGQVATRGIGKDAFQEADVLGMTMPITKYNYQIRDTADIPRVITEALHIATTGRP
                     GPVVIDVPKDIQERVVDFYHDPTVQLPSYQPTVEPNGLQVKKILKQLSQAQKPVILAG
                     GGVNYADANKELVAFAERYRIPVVSTLLGLGAMPIEHELSLAMGGMHGSYAANMAMDQ
                     ADYIINIGARFDDRLTGNPTTYAPNATVAHIDIDPAEIGKVVKTAIPVVGDAKATLKA
                     LLALETVETGYADWTAQVLENKRRAPFWYDEDEKVIKPQAAIELIGQLTQGDAIVVTD
                     VGQHQMWAAQFYPYKHARQLVTSGGMGTMGFGIPAAIGAKLANPDKEVIIFVGDGGFQ
                     MTNQELAILNGYGVPIKVVLINNHSLGMVRQWQESFYEKRRSQSVFDDELNFQLLAEA
                     YGISHYSFDNPATLSEDMKVILEDKPMLIEVHISNREHVQPMVPAGKSNAEMLGVKFN
                     A"
     gene            18033..19085
                     /locus_tag="U1021_000114"
     CDS             18033..19085
                     /locus_tag="U1021_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glycosyltransferase family 2/GtrA
                     family protein"
                     /protein_id="HEM4710713.1"
                     /translation="MYYVAIPAYQPDEKLIQLLEIMKSRLNCQVIVVDDGSTGASKNI
                     LEIAKTYAIVLHHDVNKGKGQALRTAFSFIQDLRKPGVVVTADADGQHAVNDIDRIAR
                     AAMNLPSRLILGVRQFTKDIPFRSRFGNKLTRVLFRLQTGVNVSDTQTGLRGFHTDLI
                     PFMLDIEGDRYEYEMNMLTQASQRYKITEVPIQTIYIDDNASSHFRPIKDGLLIYKNL
                     FKFALASFGGFLVDYGVYALALLLLTSLPTALRLLVANTIARICSATCNFALNKKLVF
                     NNEESIAQTGTGYFTLALVLFLCDTALLYLFHQILGLNLYIVKLAVGIFLFLASWFVQ
                     KNIIFKERKSFSHEIA"
     gene            19072..20007
                     /locus_tag="U1021_000115"
     CDS             19072..20007
                     /locus_tag="U1021_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002918105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiester glycosidase family protein"
                     /protein_id="HEM4710714.1"
                     /translation="MKLLKKPFAYASIFGMLLTGGFTYSMLKTFVLSEAITTVAASNA
                     TANSQNTATSSSSTAATTATNVSTTDTSYTDDNIQINLETITTNNTTVYVADIQVSSP
                     EYLKTALAQNTYGTNVTAKTSETAAANNAILAVNGDYYGANSAGYVIKNGVLYRDTVR
                     DNAAYGDLAIYADGSFEVIYENEITAQELIDKGVVNLLAFGPSLVENGEIVADTSTEV
                     GRAMSSNPRSAIGIIDENHYIIVVADGRTSESQGLSLYQMAEVMKQYGAQTAYNLDGG
                     GSSTLYFNGQVINNPTTNGNTISERAVSDIIYIGY"
     gene            19982..20398
                     /locus_tag="U1021_000116"
     CDS             19982..20398
                     /locus_tag="U1021_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710715.1"
                     /translation="MTLSTSVTNSTTRVSRTFISYLAITAFLFIFSRIYESLSYGEVS
                     IFMHYMFCVTLIGGAVLLGLLQLMPTLSRLSYNLWNSGVATITAGCLLRGIINLSGRS
                     TTLDQPYWYIGAGFLVLSLVGLFINPSANNYRKTTT"
     gene            20556..22271
                     /gene="ilvD"
                     /locus_tag="U1021_000117"
     CDS             20556..22271
                     /gene="ilvD"
                     /locus_tag="U1021_000117"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEM4710716.1"
                     /translation="MTEKETLKNLRHRSSVYDSMVKSPNRAMLRATGMTDDSFEKPIV
                     GVISTWAENTPCNIHLHDFGKLAKEGVKEAGAWPVQYGTITVADGIAMGTPGMRFSLT
                     SRDIIADSIEAAMGGHNVDAFVAIGGCDKNMPGSMIAIANMDIPAIFAYGGTIAPGNL
                     NGKDIDLVSVFEGIGKWNNGDLTAEEVRQIECNACPGPGGCGGMYTANTMATAIEVMG
                     MSIPGSSSHPAESPEKKADIEEAGRAVVRMLELGIKPSDIMTREAFEDAITVTMALGG
                     STNATLHLLAIAHAANVDLTLEDFNDFQERVPHLADLKPSGKYVFQDLYNVGGVPAVM
                     KYLLKNGFLHGDRITCTGKTVAENLENFADLTPGQDVIMPLENPKRADGPLIILKGNL
                     APEGAVAKVSGVKVRNHTGPAKVFDSEEEAIEAVLTDEIVDGDVVVVRYVGPKGGPGM
                     PEMLSLSSMIVGKGQGDKVALLTDGRFSGGTYGLVVGHIAPEAQDGGPIAYLRTGDLV
                     TVDQDTKEITIHVSDQEIEERKKTTVIPPLYSRGVLGKYAHTVSSASKGAVTDFWRPE
                     QTGKK"
     gene            22304..23584
                     /locus_tag="U1021_000118"
     CDS             22304..23584
                     /locus_tag="U1021_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 8"
                     /protein_id="HEM4710717.1"
                     /translation="MVKLQDSTSPLTSNKQPHKEEKRREEKRAVVLAGDYGYIRQIET
                     TLKSLIFHNSHLKIYIFNQDIPKEWFIHYKSLLNQIGSDLIDIKLLDVPLNRDWYAGF
                     SHITYMAFARYFIPQFVSEDKVLYLDSDIIITDSLDNLFTIDISQHYLAVVRATFGYG
                     LGFNSGMMLINNKRWKAENITTKLVEKTEQEKDSIQEGDQTILNLVLGHEAIWLDDTY
                     NFQIGFDQGAFSYRHQHLFELSLDPLPKILHYISGDKPWNTYSSGRLRDVWWHYHFLA
                     WTEILKKWENIQTMIPKKHCKGKLLIITNTHWLQNIEYLVKQLPDYEFHITAFTDVAN
                     NLKQLSSQENVFIYPHIIAYVLVDMIKNCDIYLDINHGSKLDELLEHVIVNQKPVLSF
                     DNIAAPIFENYSHRQVFSYHLPENFVTAVRLLSE"
     gene            23598..23984
                     /locus_tag="U1021_000119"
     CDS             23598..23984
                     /locus_tag="U1021_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710718.1"
                     /translation="MKLNVELSRFRVKEGKTAQVDEWMAFLNEHMEDTLLTLEGEKMY
                     VETIFREVLDGREYLYWYSVQAEGGIEVEDSESYIDKKHLEYWEKCIDPSYGMVDLDP
                     QVIMIPKPVYETMEELDRQYDETFKK"
     gene            complement(24000..24347)
                     /locus_tag="U1021_000120"
     CDS             complement(24000..24347)
                     /locus_tag="U1021_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF59 domain-containing protein"
                     /protein_id="HEM4710719.1"
                     /translation="MREDIQINERALVLSEQLVEVLESIYDPEIELDIYNLGLVYEIN
                     IDEAGFCKVIMTFTDSGCSCADTMPGELVTALKTIDGIEDAQVEIVWSPAWKMTRISR
                     LGRMTLGISPKRK"
     gene            complement(24438..24887)
                     /locus_tag="U1021_000121"
     CDS             complement(24438..24887)
                     /locus_tag="U1021_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEM4710720.1"
                     /translation="MELKDIMHILEDMKVGVFATLDEYGNPHARHAHITAANEEGIFF
                     MTSPETHFYDQLMGDQRVAMTAISEEGYLIQVVRVEGTARPVENDYLKTVFADNPYYQ
                     HIYKDESSDTMQVFQIYAGHGFYHSLTQGHKYIFSIGQGENSEVRTL"
     gene            complement(25415..26206)
                     /locus_tag="U1021_000122"
     CDS             complement(25415..26206)
                     /locus_tag="U1021_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014623538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HEM4710721.1"
                     /translation="MIFISYNHGDQDVVDMIAKRLEIEFGRDNIFYDKWSMQPGDSII
                     GKMDEGLEKVTTFFYFLSSNSLNSNMVKKEWQAALTKSLYEGVKFVPIKVSDCKIPAI
                     LTDVYYIDLFSQGLDNTIEQMRSVISGSSRYTPLPDIENLQVSIKYISTNEVEFKIFT
                     THFVESDASFGFVCKNPIDSYEVRPLTETIYRSMQGETYKKLSDGREKAFKMQIGILQ
                     RSITPSQPFIGRLVSKQLPLQLEGILHIKSFEPVNFRELKINIEQ"
     gene            complement(26390..27829)
                     /locus_tag="U1021_000123"
     CDS             complement(26390..27829)
                     /locus_tag="U1021_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000434831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HEM4710722.1"
                     /translation="MKYKKPLSHYQFSPESQYLDRKSARKKPSELLKHLIAFANADGG
                     QLVIGIEDEKQENIITGFKDGRAYPIDDFKKIDREMRETPLDLSFEEIPVINHKGEED
                     FILVISVELSSNRVIAAPNDDVYLRQGDDSVKLSYEQRTQLSYDKGQRFFEDEVVPDA
                     RLKDIDDSLVQDFKNRFDISERSVEEILKARRFLINGKLTKAAILLFGKYPSAFFPQA
                     RVRFQRFDGTDMGTGSSFNVIKEVTFDDALPILIIKVRDFIRTQLREFQYLDDNGQFQ
                     ILPEYPEFAWFEGVVNAVTHRDYSVYGDHIRVLMFDDRLEIHSPGKLPNIVTVDNIKH
                     ERFSRNPRIARTLTEFGWVREMNEGVKRIYSEMESAFLHEPKFSEPGNKVVLTLENNI
                     VSRHLRTRDSLEKQFSDFGELTADEQLIVHYMYNSGERMTTAKAVELTGRSRRHIGKV
                     LQKLTDQGLLKWYGNSKNDKNQYYTLASK"
     gene            complement(27866..29074)
                     /locus_tag="U1021_000124"
     CDS             complement(27866..29074)
                     /locus_tag="U1021_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002266884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710723.1"
                     /translation="MTISKFNSVFSRTNNKEIKAPTALRKKLNLEAPKGYSYELMEGT
                     EDMYVLRSRKNRKENSFQVRIKFPLEFEGMKIQNINELVEAMYRTQKIFILDESLQEN
                     PPTIIHLGSSGVTKQMIGSAEKFPALEPLEVESGEERLLLPVERVPYPSLTKIKIVSS
                     RDQLIDLEIILDEESNNIKMTVKLNYKHLITLDDYFKNLGIIRSFFTTGIKIFNKTLV
                     PDNNQIEAFQQNHIFFEALREIQRFFSVTFEFPHKISNDDVYFTKILFESFINNRLVA
                     IKNKNQIAFTFDKEKFYASSHPELEDGVEIGVVNTREIISLELFGAELQFLEYTIYPR
                     MAFKQKMDENREEIKMIFDLPEESEYYVLFSLDSMNDFDMTINSQELFELIDNAVSIQ
                     NIDFSKSASG"
     gene            complement(29074..29958)
                     /locus_tag="U1021_000125"
     CDS             complement(29074..29958)
                     /locus_tag="U1021_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018030744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="abortive phage resistance protein"
                     /protein_id="HEM4710724.1"
                     /translation="MTTIVNYRAKEERDDFEVIQSKITANALFNFMREYSYLEKAILN
                     MAICPRYYPEDISYLNLKYNSKDLTEWYIPMTCFCDIPLHQISYHAEGNSILLNDKGY
                     GKFSIAFHKEFGIRKGIQPIHYLNTSSVQVEELTAALNILINKDSDYSEDSDILMNFI
                     FEYIRMIKPYTGKMKRRDRDNNVIEIKKNFQDEHEWRYIPKLNPRELPLMLIEEEEIR
                     AEEINKIYTDSILQTRDGVLKFDVEDIRYIFVDTVQNRNRLIQFIRGKRKGRRLSSQE
                     KDILISKIMVYDELKEDW"
     gene            complement(30008..30499)
                     /locus_tag="U1021_000126"
     CDS             complement(30008..30499)
                     /locus_tag="U1021_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000456289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710725.1"
                     /translation="MEPYITESVVNAGIELGILAVKGTTAKINSKIQSMKTEREADKL
                     RSAYDDIVNELIIERAEALRIAQIYKEEYEKVTIKDEDIEYLHNTLIRIISLFSSFGN
                     VTEEQTVSFQQMAELLNKDTLKTMQLLGFNYREAIGEPLTEVCANTIKSKLGNFSKAK
                     KKK"
     gene            complement(30606..35006)
                     /locus_tag="U1021_000127"
     CDS             complement(30606..35006)
                     /locus_tag="U1021_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011226246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /protein_id="HEM4710726.1"
                     /translation="MISNFDFLAIDIDTAELFRTINMAEENYTHGDYEGTLTKVRKVA
                     ENTARLVADREYLDISERATFNDVLREIRDFIPNKTIVDHFYDIKGKGNNSAHVLNPE
                     DATKENALKSLKQVFDILAWVMLTYIEPDIKASAIGHFLEPRAQEMYTTAERKFIYIQ
                     TVNNESGLFNAFEGTQKIGEGSISSDDIETDWSPNSDFLRTVAPKRINQYMKTSGLPY
                     TLGWVELAYKKATKSWFHDYDVHNVLKRSGIKQAEQLEGTEWFKTDLETAKAAIKAVK
                     EGRNYLNITAKESFIEEPVITLRPEQEAAVEQTQKVFKKKDRMLWNAKMRFGKTLTSL
                     QLVKNEAFQKVLIMTHRPVVADSWFDDFKKMKMSADGYDYGSVNQGETLENLKRGEKP
                     FVYFASIQLLRYNGGQTNLKDFADVDWDLIIIDEAHEGTQTELSDTVMKELVKEHTKI
                     LELSGTPFNLLDQFDEEQVYTWDYVMEQQAKKKWELERPSEPNPYETLPKVSMYTFEM
                     KHKERFSDESKSFNFREFFRVAENGKLVYKQEVRQFLDNITHPDSRTNYPFSTKSYRE
                     ELRHTLWLMPGVKEANAFEGSLKEHPIFGKEYKIVNVVRGASSDDGIANDADIEKVRS
                     AIGKDPSQTKTITLTVRKLTTGVNIPEWTAVLFLSNTNSAMNYLQAAFRAQTPFSHEK
                     LGMKTNCYVFDFAPDRALTVMAESAQINSGVGKKNTQAQKQAMARLLNFMPILGASDN
                     GMKTYDVDRMLTQLKKVYAEKAVRSGFEDDSLYNDNLLTLTADDASMFTKLNAIVGKT
                     QSQKTPKKVVINENGLTTEEHEQAEKAKKKPKAKRTAEDLEVIEKQKEAKKQRKNMIS
                     ILRGVSIRIPMMIYGMAVDLSKDITIQDFIKQVDDESWKEFMPKGFTKGMFSEITKYY
                     DAEVFIEAGRIIRQRAKSFDDLDFIERAEQIAELFGTFKNPDKETVLTPWRVVNLQVS
                     KSVGGLNFYDDNFESVTDGATSNLHWVDNELTSSIYQKETKILDINSKTGLYPLHSAI
                     SLYYQRVAENDDNRFEADQVYQEILANNIYAIAKTPMAKTITERTLTGYRKYKTNVTY
                     IESLTDILKTDIEQGKKLVEEAFNKVKFDVVIGNPPYQESATEKEMVSGQQQRVNNVF
                     QLFQKITDKLNPNHSVLIYPGGRWMQQSGRGMNEFGIELINSTNLSHLIYYPNANEIF
                     GEVAISDGISIVHKDYSKTSDTFEYSLVEGGKTLAIQRNYPGKETFVIYPTDESIVQK
                     IKKFVADNNLNFLSSSSTINQKLFQIESNFVELNPDKVEIYNGQEFDKKTQIKLLAND
                     KAGKAGRATWFIAQREVIKVKQDLIDKYKVVVSSANAGGQKRDNQLAILEPYTAFGRS
                     RLALKAFDTRIESTNFYNYVSSKFIRFAFLLTDENLSSLAKLVPDLLDYTENQKMIDF
                     TRDIDEQFIKILDLTNEEVKRIEDRVDNLR"
     gene            complement(35010..35705)
                     /locus_tag="U1021_000128"
     CDS             complement(35010..35705)
                     /locus_tag="U1021_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011681365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylase"
                     /protein_id="HEM4710727.1"
                     /translation="MEESLIKSKQRVQKHGEVFTPAWMVQKMLDTPGVKEACESVYKT
                     FLEPSAGDGNFLQAILERKLEAVVRQYDKRNWKTKSLVALSSIYGIEFLEDNLEVARS
                     RMFLCYLDWYEQAFGTRLNSKNDIYQSAHYLIHKNIVRGNTLTQQHPVTGEPIRFNEW
                     QLVKGHPSLVRKIPFALSELLGKEVEDDRTVVEGQLSFFDIDDEFMIENESVKKADTI
                     KEITIQKVYLLGD"
     gene            complement(35914..36306)
                     /gene="rpsI"
                     /locus_tag="U1021_000129"
     CDS             complement(35914..36306)
                     /gene="rpsI"
                     /locus_tag="U1021_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEM4710728.1"
                     /translation="MAQAQYTGTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADL
                     RLVINQPFAVTSTQGSYDVFVNVNGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAG
                     LLTRDARMVERKKPGLKKARKASQFSKR"
     gene            complement(36326..36772)
                     /gene="rplM"
                     /locus_tag="U1021_000130"
     CDS             complement(36326..36772)
                     /gene="rplM"
                     /locus_tag="U1021_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003083327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEM4710729.1"
                     /translation="MNKTTFMAKPGQVERKWYVVDATDVPLGRLSAVVASVLRGKNKP
                     TFTPHTDTGDFVIVINAEKVKLTGKKATDKIYYTHSNHPGGLKSISAGELRSKNAVRL
                     IEKSVKGMLPHNTLGRAQGMKLKVFVGAEHTHAAQQPEVLDISGLI"
     gene            complement(36999..37892)
                     /locus_tag="U1021_000131"
     CDS             complement(36999..37892)
                     /locus_tag="U1021_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase-like hydrolase"
                     /protein_id="HEM4710730.1"
                     /translation="MKRLLSCYASDMVGATKEELKQSILSSEGRIIMGETVVTAAPLI
                     AGVTNAEMMAAFGCDLLVLNELDVFHPEIVDFYDCDNPIAEIKRLTGRLVGINLEPVD
                     TSQEVQDQQVFLKPGRQVSPESLRQAQALGVDFIMLTGNPATGVSMAAIRSAIGLAKE
                     YFEGLIFAGKMHGAGLGESVVDSQALLDFVDLGADGVLIPAVGTVPGVREEIVAPIVS
                     QVKARGALVISTIGTSQESADSQTVREFGLSNKRVGSDIHHIGDGGYGRMPDPENILA
                     LSLAVRGKRHTYFKMGQSVRR"
     gene            complement(37963..38823)
                     /locus_tag="U1021_000132"
     CDS             complement(37963..38823)
                     /locus_tag="U1021_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019319849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEM4710731.1"
                     /translation="MTFKIVTDSTSDLPISWVQENDVTVLGLTINLDGVTYETVGENR
                     LTSADLLEKMATGGLPTTSQINVGQFEEVFEAVAKEGQDVLYLAFSSALSGTYQSGTI
                     ARDMVLDNYPQAHIEIVDTKAASIGEGYLVMQAAQARAAGKTLAETKAIVEDLVPRLR
                     TYLLVDDLNHLVRGGRLSKAAALIGGLVNIKPLLALNAEGKLEAIAKIRGRKKGIKEM
                     LNLTLDNLDHSTVMVAYTGDIETAEAVKETLLEDSRVSDVLLIELGPIIATHTGTGVL
                     AILSINKKER"
     gene            complement(38820..39341)
                     /locus_tag="U1021_000133"
     CDS             complement(38820..39341)
                     /locus_tag="U1021_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEM4710732.1"
                     /translation="MKEKVLIVDGYNMIAFWQATKQDFKKGDLDAARTTLLRTLSHYA
                     AFEQIEVICVFDAHHVPGLRQQYDEFKVSVIFTEEEETADSYIERLSAQLNSARRKQV
                     SVATSDLNEQWVVFSQGALRVSARELEERTRVIKKDLDKFVDQVELYTPRLNPWSDGN
                     FQALKEMMEEMKE"
     gene            complement(39342..40070)
                     /gene="rlmB"
                     /locus_tag="U1021_000134"
     CDS             complement(39342..40070)
                     /gene="rlmB"
                     /locus_tag="U1021_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEM4710733.1"
                     /translation="MEHNDIVYGVHAVVESLEANTGNKLYIQDDLRGKNVEKIKALAA
                     EKKVSISWTPKKTLSDMTEGAVHQGFVLRVSEFAYADLSVILEKAEQEDNPLILILDG
                     LTDPHNFGSILRTADATQVAGIIIPKHRAVGVTPVVAKTSTGAVAHVPIARVTNLSQT
                     LDKLKEAGFWVFGTDMNGTPSHKWNTAGKLALIIGNEGKGISSNIKKQVDEMITIPMK
                     GHVQSLNASVAAAVLMYEVFRKKI"
     gene            complement(40126..41343)
                     /locus_tag="U1021_000135"
     CDS             complement(40126..41343)
                     /locus_tag="U1021_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HEM4710734.1"
                     /translation="MDQWMRDFEERQRHDELKQKMDAQTSAMNSQAIALQKQNNILQK
                     EHERQIEKEFKDRVFQLRLHLAQVTDESQRFVIQQMLSEAEEDYENYQREQAEKRLAD
                     AKRRKIGLIISSIVAVLGMAGLYFVYQDSSQVTVPELYGIELSEAKDLLYEEGLKVGT
                     ITEVGGQSVQPGMVSVSSPSSGKKVKRGSAVNLIIAKNVDAKDTTVVEDSSTSEVATS
                     KTAGSSQASSQSQVGSAVQSFTVDIKKQGLVIRQEPSLSGEVVTNIEPGTYTIVETTQ
                     KEGHSWGRLKSGQGWISLTDLHNPVPQVDTKNLTTDQVKAWVMDDLFRRSVMIEKYRK
                     DQVVISVHMAEDGLVYADVTVPSDPNFEPRDWSYRINSRGELEASEYDTDPEQGGVNW
                     YVAQHYYLENSVN"
     gene            41535..41924
                     /locus_tag="U1021_000136"
     CDS             41535..41924
                     /locus_tag="U1021_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1761 domain-containing protein"
                     /protein_id="HEM4710735.1"
                     /translation="MTLVFGIVAGLIAFAIGGLWYGLIFRDAWIKASGIDMAKVEADR
                     QAGKNGQKEMVISLVIEVLTAVVAIFFIKTLDVSPLHAAGGMGVIAVLASLKNYIFEQ
                     RPINLILINESYKLVCYLVVGIIALFA"
     gene            41995..42963
                     /locus_tag="U1021_000137"
     CDS             41995..42963
                     /locus_tag="U1021_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HEM4710736.1"
                     /translation="MSLSHRTIKLIFATVLAIYLATALGLSYATAAGIIAILSVLDTR
                     KSSFKMARNRLFSTLLALTIAVLTFALFGFGIWTLGIYLALYVPLAYRFNWEAGIAPS
                     TVLVTHLLLEQDISLIFLGNELALFLIGAGLALLFNLYMPSQEKKIQAYHDQVEDLLK
                     QILLRFEAFLLNGDGRNEAELITQLDKTLDEALKVVYLDRHNQLFQQTNYQVHYFEMR
                     AAQNKILRTMAGNINKCLLEGRENVILSSLFERTAQQLSRENSAKELLLDIELFHATF
                     RERPLPQTREEFETRATLFQLLHDMEAFIRLKVDFYEVYKDQEPSV"
     gene            complement(43058..43330)
                     /locus_tag="U1021_000138"
     CDS             complement(43058..43330)
                     /locus_tag="U1021_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710737.1"
                     /translation="MDGRVLSHSQHLQEVPMKTLLKKIRLAALSILLYNLILILSIWL
                     GKVSSKEEFMIAVAGNAVMMGLSFLHLHNQVSSFSLSFITSLTHLA"
     gene            complement(43570..44700)
                     /gene="ugpC"
                     /locus_tag="U1021_000139"
     CDS             complement(43570..44700)
                     /gene="ugpC"
                     /locus_tag="U1021_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEM4710738.1"
                     /translation="MVQLNLKNIYKKYPNSEHYSVEDFNLDIKDKEFIVFVGPSGCGK
                     STTLRMIAGLEDITEGEAYIDGVLMNDVAPKDRDIAMVFQNYALYPHMTVFDNMAFGL
                     KLRKYSKDEIKKRVEEAAQILGLTEFLERKPADLSGGQRQRVAMGRAIVRDAKVFLMD
                     EPLSNLDAKLRVSMRTEIAKIHRRIGATTIYVTHDQTEAMTLADRIVIMSATKNPAGT
                     GTIGRIEQIGSPEELYNRPVNKFVASFIGSPAMNFFTVTLQDGVLVGDGFKVELPEGR
                     RKHLEEKGYNGKSFTLGIRPEDIKASQLELDTYPSSIVEAEVVVSELLGAETMLYSKV
                     GSTEFVSRVDARDYHNPGDKVRLTFNLNKAHFFDDETSKAIV"
     gene            complement(44936..45796)
                     /locus_tag="U1021_000140"
     CDS             complement(44936..45796)
                     /locus_tag="U1021_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4710739.1"
                     /translation="MSKREELQHLFPKGRLVFEKTENGASIQLPLADQTWFSVDRKDL
                     TDREIELIDLLMNDSSAEQGHPWGRYFQGGGPLPQTLEKLQVIHAHVGHVSDEDGKVA
                     WLDMMAKLLPNLQGYYTGNGQDYLFILHQAPLFDVKEILRDTLATMEFDFGLRITLFL
                     GQIWPAKLVHSWPQLIEAEQSLFHHWRSSHHQSRLLTFGQLYLWAGQLHPVLREGLAS
                     LIAHQQLEKEIVALWQEGAVITKAAQSLYIHRNTLQYRLDKWFDWTGLQLKELTDLAV
                     CYMVIMDLSI"
     gene            complement(45809..47101)
                     /locus_tag="U1021_000141"
     CDS             complement(45809..47101)
                     /locus_tag="U1021_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4710740.1"
                     /translation="MMHKMLVVDDEYMILEGMKHLLPYHEYNVEIVYTAENAEEALDY
                     FSQHTVDLVLTDVSMPDMTGLEMVRRMKEQSPDTHIIIMSGFQEFEYARKAISLGAMD
                     YLLKPINKQELAKLLQQLPTLKKETDREYTKGFLAGTLTASELLRHSQKTWFAARETP
                     NPMGYCREKNILHQVYYFQLTESRPEGSLYTEEVTPTMTIRQLIDKVERRLFYKQLSE
                     DLTATTTELYKDMEPLLRAGRLAKIVDVLPHLADKLREATPAVYLTKQFFNQMMSDVF
                     YYFNEEDHQRLEDFYVKVEASRDLHQLLDYFSHYLKKFSESSTYSPHVQEVVTIVRER
                     FAEELSLKDMSAHLYLNTVYLGQLIKKETGHTFAELLNHQRIKVAQQLLLNSQLGIEE
                     ICFQVGYTNVGYFYKIFKRICGESPKNYRQKIGQLQTE"
     gene            complement(47091..>47416)
                     /locus_tag="U1021_000142"
     CDS             complement(47091..>47416)
                     /locus_tag="U1021_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM4710741.1"
                     /translation="HGVDLKRKDNALSVKALKHGQDMEILIRDNGKGMNAETLEAYKH
                     LLASRELSQENRSQSIGLRNVHERLLLYFGDRYQIELDSKEGEGVTYSILFEGVFPRG
                     DEHDA"
BASE COUNT        13420 a        10788 c         8932 g        14276 t
ORIGIN      
        1 ttccaacgag cgttggcatt tgtgtgctcc aaatagcttc ttagctatgt ggagctacac
       61 aaattagcca acgctcccct ccatctcata ggcaatcagt ctgttgagtt cgactgcgta
      121 ttccattggg agttcttttg tgaatggttc gacaaagccc atgacaatca tttctgtagc
      181 ttctgattcg gataggccac ggctcatgag gtaatagagc tgttcttctg agatttttga
      241 tactttggct tcgtgttcga gggccacttg tgagttatgg atttcattaa atggaatggt
      301 atctgatttg gaaatatcat ccatgataat ggtgtcacat tcgatgtggc tgatagactt
      361 ggctgagttt ttagcaaaag tgacttgacc acggtagtta acttctccac caccacgggc
      421 aatagatttg gacacgatag aagatgaggt gcgtggggcg ttgtgaatca tcttggcacc
      481 ggtatcttga acctggccct tgttggcaaa ggcaatggac aacatagttc cacgtgcccc
      541 ttcgccttcc aagtaaaccg cagggtattt catggtcgtc ttagcaccaa ggtttccatc
      601 gatccactcg actgtggcat ttttctcagc acgggcacgc ttggttacta ggttataaac
      661 gttatctgac cagttttgaa tggtcgtgta acgcatatag gcaccttcgt gggcaatgat
      721 ttccacaata gcagcgtgaa ggctggccgt tgagtaagtc ggagcggtac agccttctac
      781 atagtgaaca cttgctcctt catccacgat aatgagggtg cgttcaaact gacctgttcc
      841 ttcgttgttg atacggaaat aggtttggag tggaatatcc aatttaacgc cttttggtac
      901 atagatgaag gtaccacctg accaaaccgc tgagttgagg gcagctagtt tattatctga
      961 cggcggaacg agttttccaa agtatttttt gaagagttct ggatgttcct tgagagccgt
     1021 gtcggtatct gtaaagataa tgccgtgctt gtcatactct tccttcatat tgtggtagac
     1081 cacttctgat tcgtactggg cagaagcacc tgccagataa gcacgctcgg cttctggaat
     1141 cccgatgcgt tcaaaggttt ctttgatttt gtctggcaca tcgtcccagc tgcgtgctgg
     1201 cttatctgac ggtttttggt aatagacaat gtcatcaaaa tccagctcag acaagtcggc
     1261 tccccaggtc tgcatcggca ttttcttgaa ggtttggtag gatttcaaac ggaattccaa
     1321 catccattca ggctcgcctt tgatacggga catttcacga atgacatctt cgctcaagcc
     1381 cctaccagtc gaagccacca gttccacgtt ttcatcatgg aaaccgaatt tgtattcccc
     1441 aagatcaatc ggggttggtt caattctttc ttctgacata atataagata catggcccct
     1501 taagaaagca aatgaaaaat agggaatcga cctcgtgtgc aaacacacgc ggagatttat
     1561 ctttttcaaa agcttctagg gcgagttcaa tttcatttcc aatcagaaac tgaacaatcc
     1621 tttctgtatg attttcattt tttgtttatt tatagtcttt tagtttactt ttagtactag
     1681 gcaacgagct gcagacagta ctggagtacg gcaaagcgag ttaacgaagt aataaaagaa
     1741 aaactaaatg actatattga tgctcattca gcactctcac tgcgttcgat tgctttcttc
     1801 aagacactaa acttggttgg aactaaagtt cctaaccaag taacgcaagg ttctaatcaa
     1861 ccttgctaag cggcttacta attcgctgat tttggtatta tcgaccaaaa tcgctcatgt
     1921 cgcagttacc cttcagtcag cactttcact tcgttccagt gctttcttca gggcattcca
     1981 cggtaatgtg gcacacttga tgcgttgggg gaatttggcg acacctgcga ggagggaggc
     2041 gtcccctagt tccttctggc gtgtgtcttc ttggccttgg accatttgtg agaagatttc
     2101 tgctagttct tgaatctgac tgatttcttt gccaagcact gcttcagtca tcatagaagc
     2161 tgatgcggtt gaaatggtac acccaacgcc gtcaaaagca atatcggtaa tcacatcttt
     2221 ttcaatcttg actgatagtt caatcacatc gccgcaggtt gggttgtgga gttccaactt
     2281 ttccactccg tccaagctcc cacgatgacg aggtgacttg gagtgttcag acacaactgc
     2341 catataaaga gagtctaatc tagatagggc cattgaaaaa ctcctttgtc ttgatgattg
     2401 cctcgaccaa cttatcacag tcagccttgg tattgtagat gtaaaaactt gctcgtacag
     2461 tagcaggcac ctgcaaatat ctgagaagcg gttgggcaca atggtggcca gcccgcacag
     2521 caacaccttc gtagtccaag gcggtcgcca catcgtgtgg atgcaagtcg tccaagttaa
     2581 aggcaataac tcccgtccgc ttggacaggt cctgactacc ataaattgtc aagcctggaa
     2641 tagcctgtaa tttaggaaag acgtagtcaa ccagttctgc ctcgtgggcc tggatagcgt
     2701 ccatgccaat ttcagtcagg taatcaatgg ccgctcccag cccaatcgca cctgcaatat
     2761 tgggcgttcc tgcctcaaac ttccaaggca attccttcca agtggctgtc tgctcataga
     2821 cgaagtcaat catctcgcca ccgaattcaa ctggcgacat gcgattgagt aattcttcct
     2881 tgccgtagag aacgccaatt cctgtcggtc ctaacatttt atgacctgaa aaggcataga
     2941 aatccacgtc taattcttgc acgttgacgg ccatgtgggg aactgactgg gctccgtcca
     3001 ccaccaagta ggcaccgact tgatgcacca gctctgctat ttttccgata ggagccacgc
     3061 tgcctaggac attggatacg tgtgctaggg agacaaactt ggtcttagaa gatagtagcg
     3121 accgcaggtg gtccatgtct agctcgccgt cttttagggt cacatagcgg agcttggcac
     3181 ctgtttgctg acaggcttgc tgccaaggga tgatattgga gtggtgctct tggaccgaga
     3241 ttatcacttc ctggtctggc tggagaattt ctctagcaaa ctgagctacc caattaagac
     3301 cagtggtcgt ccctctggtg aagaggattt ccttgctaga cttggcctgg ataaaatctg
     3361 ccaccttctg cctagccgcc tcgtagcgag cagttgcccg ttccgacagg gtgtgaacgc
     3421 cacggtggac attggcattg tccttctggt aataatccgc cagcacatct agtacctgct
     3481 gcggtttttg agtggtcgct gcattgtcca aatagaccaa cgactcatcg ttaacaactt
     3541 ggtctaggat gggaaaatcc ttgcgaatgc gttcaaaatc aatcatctta tctctttact
     3601 aatttttctt caatcacggc aatcagttgg tcacgaactt ccttgacagg aatttcggta
     3661 atgactgcac caaggaaacc gcgaacaacc aagcgttcag cagttgctcg gtccaggcca
     3721 cgactcatga ggtagtacat atcttctgga tccacctgac cgattgaagc tgcgtgtcca
     3781 gctgtgacct cattctcatc gataaggaga attgggttag catctgagcg agccttatca
     3841 gacaacatga ggacacggct ttcctgctgg gcatccgctc ctttagcacc gcggacaatg
     3901 tgtccgatgc cattgaaggt caaggttcca ctttctaaga taaccccatg ttgcaggatg
     3961 tgaccgactg aattatgacc gtagttggtc acgcgcgtat ccacaccttg tacctgacga
     4021 ccggaagata gtccaacaac cttgaggttg gcatggctac cgtttccttt caattcgctg
     4081 tctaagtccg caatgacatt tccttcgttg agcagaccaa tcgcccagtc aatcgttgca
     4141 tcatttccaa gatagccgcg acggttgagg taggtatcca aatgcttacc aaggcggtca
     4201 atagccgcaa acttgatttg gctaccagca agggcgatta cttccacgac aatattggct
     4261 gaagtcgcta ctgctccgtc acccagactt tcaaatcgct ctagataatt aagcttggca
     4321 ttttttccag cgatgatgag gacacgttta ttaaaagcaa ctggactagt gctgtcttgg
     4381 tagaaaaggg cctcaaccgg ctggtcgatt tcaacattat ctggcacgta gaggacagca
     4441 gttgcgttga aataagctgt gttataggcg gctaatttgt gttcatcata agctacagct
     4501 actccaagat atttctcgat aacatctgga ataagatcca tagccgatgc gaagtcagta
     4561 aagactacac ctttctctac taggtcagcg ggcagttgtt ctaagaccgt ttggctgcca
     4621 acttggacca acataggatt gtcaccgata gctgtaaaat ctggcacagc tccgatttca
     4681 tcatttgtag ctaggcttcc gtcacctaaa ttccaacggt gaaacttgac ccgctcgata
     4741 accggcaagt ccagctctgc tattttgtca aaagccttaa ggcgcaggtc tgtcaaccat
     4801 gttggttctg cctgcaaggc tgaaaattct tgaatctttt ctttggtcat aacttcctcc
     4861 aaagacttaa atgtcatctt ctttgtagtc gatgccaagc tcagctgcga cttggacata
     4921 tccttctttt tccaagcgtt gcgccaattc tggtccgcct gaaagcacga cacgaccttc
     4981 catcatgaca tggacaacat caggagtgat gtagttgagc aagcgttggt agtgggtaat
     5041 aatcatggca ccgaagcctt caccacgcat agcattgatt ccttttgaca cgactttaag
     5101 ggcatcaata tccaatcctg agtcaatctc atcaagaagg gcgaaagttg gctctaacat
     5161 gagcagttgt aggatttcat tgcgtttttt ctcaccacct gagaaacctt cgttgaggta
     5221 acgctctgcc atttcctcct tcatgttgag gagttccatt ttttcatcca acttggtgat
     5281 gaaatcacgg acagaaatct tgtcttcgtc ttccttgcca gcattcatag cggcacgaag
     5341 aaattccgca ttggtgatcc ctggaatttc cgacgggtat tgcatagcca agaaaagacc
     5401 catacgggca cgttcatcga cttctaactc caaaatatta acaccatcga agagaacttc
     5461 cccttgggtc acttcgtaac ttggattgcc catgatggct gctgaaaggg tggatttccc
     5521 tgttccgttc ggtcccatga tggctgcaat ttcacctgtt ttaagggtca aattaacgcc
     5581 ttttaggatt tctttgcctt cgatttccac atgaaggtct ttgatttcta atactgacat
     5641 gctgtgctcc ttttcatttt tgtcctcttc aaaaaccaca ttaactgacc aagctaacta
     5701 gatacaccga taagactcaa ctttggcagt ggggaaagaa ctcgaccatt cctcgaccat
     5761 tcatagaaga gttcgtcaac aatttttcgt tttaagttgt tgagctgaaa cagtctattc
     5821 ccagactgtt tcactcccgc cccccgcaca gctcaaaagg ttcagtgaac cttttgaggt
     5881 tggaaataga gcgaactttg ttcgcaacag tcgtaattgt cagatttgga gtgtaaaaca
     5941 cgaacaaatc tgccaatcaa ccactgcgct gagatgttga cactaacgtt gagaagcggt
     6001 acgggcttga gcccagcctc ttttcttgtt aatgatgatt ttcagagagt gttaatctat
     6061 aaaatagtct tttctgacaa ttttatactc ttcgaaaatc aaaattatcc gttgtcaact
     6121 taccttgatg agtgaaaaac tccagtggag gttttcagcc tgttaccttg aaataagata
     6181 gtaacagagt tctatcttcg gcttcgtttc ctaggctact tttgattttc attgagtatt
     6241 aattaaccat atccactata ttatatcaaa aaaagagcct gacggctctt atcttgttta
     6301 gaaaaattct tattttcttt ttttctcttc acagcacttt ttatactttg cgattttttc
     6361 ttgacggtaa ctactattac caataaaccg aagaagattg agcaatggag ttctattgat
     6421 accaaagatg ccaatcaatt cacagagaat ctcaattccc agtcccatgg tcaccaatag
     6481 gagaatcccc cctattcgac tcgaaacatt gagcaaaaga gaggtcaggg agaataagaa
     6541 agagatggcg taaatcacca atactgtgcc gcgatgagta agtcccagag agagcaagcg
     6601 atgatgcaga tgcatcttat ctgcttcata gattttttgc ccagacaatt ttcgacgaat
     6661 gatggctact acagtatccg taataggcac tccaagaata atcatcggag taaccactgc
     6721 aacagctgtc gaatttttca gtccttgaag ggacaagact ccaatcataa acccgatgaa
     6781 gagggctcct gtatcgccaa gataaatgat ggcgggatta tagttatacg gtaaaaaacc
     6841 aacaatcgcc gcaaccaaaa caaagatggt taaggttaaa aaaatattgc tatcattcaa
     6901 aaagaaataa gacacaattc ccatcgttgt cagggaaata atcgatactc ccgaaaccag
     6961 accatccaga ccatcaatca agttgactgc attcgtaata gaaacaatcc aaaggaccgt
     7021 taatagaaaa gagagccaga caggaaattg aaggaaaggt cctccaaaag gaatcttaaa
     7081 gctatcaaaa cgaaattccg taaaaatcca aatgatcgtc gctgccgcta gaataccaaa
     7141 cattttaggt gcaggcttta gctccttgac atcatcaatg aatcccgtaa gaacgataat
     7201 gctggatgct aggaccaggg gccagatata atgcaagtaa gtgccatggt aattgacacg
     7261 ggtaacaatt cctggtaaaa accctaggac agaaatggta aatgccacaa agatagccag
     7321 ccctcccgct gaaggcatgg gcaccttatt tatccgccgt gcattgggat tatcgactgc
     7381 tccaaccttc agggacataa aacgaaccaa gggagtcgca atggctgata tgaccatggt
     7441 tgtaataatg accattatgt attttagagc aaaaggaatc atactgtcgg aaccttccta
     7501 agctcctcga ttgccgcaag cggaagcatc aaagttccgt gttcttgtaa agcaggtctg
     7561 gtcaacttag tatcattggt aaattccaac attcgtgaga gaatgtagcc tggatactgc
     7621 ttggaacgat tttctacatt gataagaacg gtcaagtagt agtgaccatc cattttatat
     7681 aattccgatt cttctactgg ataatcaacc gtaccaacaa aagtaaacag atcctctatc
     7741 gttggaaatt ccaaaatgta gtaaatatag cgctcctgct cctcttcatc tgcttcttcc
     7801 tcttgctcta cctcttccaa atgacgaacg gctgttgcat ccggtgtgct tttctcacga
     7861 acggtttgct ccaaactctt gaaaaactca tctggagtca tacttgcaac atcaccaagt
     7921 tccgaaaaat ctgtaaattc atcgaaattc aagctctgat ccaaatcaga tttggtaaca
     7981 aagatgtcta cccgatctgg cttcggagtc acacgaaaac tcagcatacc actttctcga
     8041 aaagtcattg gtaaatccaa ttcatccaaa acagtataga agaactcctc tgtcttttct
     8101 tgcggaatga gaaagtccga aagttccatt cctctctctt ccaaatcatc taattttata
     8161 gtgattttca aggttgaatc actaatttgc tttactttca taactacctc attcattgat
     8221 tcatcaattt cttaaaattg attgatcatt ttcaatactc atacatatct tccaccatta
     8281 tactaaaacc aagctctaaa gacaaaagaa aagcaggtct ccctgctctt aaaataaaaa
     8341 tgtgataaag gcataaacca ataaaatcgc ccctaaaatg atgcggtagt aaccaaaaac
     8401 cgtgaaatca tgttttttaa caaagtctgt caagaaacga ataacaacta aggataccaa
     8461 gtaagccgtc acactagcga ctagcaagat ccatacctgc tccatattca ggctattgcc
     8521 atctaagaaa tatttaacag ccttcaagcc actataacca aacatggttg gaatcccaag
     8581 aaagaaggta aaatctgccg ccacagatcg gctggtcccc aaaataatcg ctcccagaat
     8641 ggtcgcacct gatcgactag tccccggaac gatgcttaag acctggaaac acccaatcaa
     8701 caaggcggtt ttataagaca ttttcgctaa gtccgtcacc tgtggctcta caccactgtt
     8761 acggttctca atccaaataa aggcaatacc gtagacaatc aaagcaatcg caatcggtac
     8821 cataaaattg aagtgcgctt caaaccaatt atccaacggg actgcaatta ggatggacgg
     8881 aatacaggca atgacaacct tggcccataa ttgccaagtc aattgaatat cacgcttggt
     8941 ttttccaggc tgaaatggat tcaatttttt aaagtaaatg gtcataactg ctagaattgc
     9001 tcctagctga atgacaatat taaacatttc taggaagttc ttgctttggt ttaatttcac
     9061 gaactcttga accaaaatta aatgccccgt tgaagaaact ggcaaccatt ccgttacccc
     9121 ttcaatgatt cctaaaaaaa tggctttcaa caattccaat agcataaaaa gctccttttc
     9181 atcaattctc tacattatat cataaaaaaa ctccctattc atagtacaag gatattgaaa
     9241 tttgtcagaa tttttaataa aatggtgtaa tagcatttta aaggagacat tatgaaacgt
     9301 aaactcagta tatttctgct gaccctaatc gctgtttttt ctgtaacaac aggggttcgg
     9361 gcagacgaat acctgcgggt cggtatggaa gctgcctatg caccatttaa ctggacccaa
     9421 gaagatgata gcaacggtgc cgttcctatt gagggaacca atcaatttgc caacggatat
     9481 gatgttcagg ttgcaaaaaa aatcgctgct tccatggaca aagaactctt ggttgttaaa
     9541 accaagtggg aaggcttggt ccctgctctt acatctggta aaatcgatat gattatcgcc
     9601 ggtatgagcc cgacagaaga gcgcaagaaa gaaatcgcct tctcagatag ctactacact
     9661 tcaattccta ccctggttgt tcgttctgat agtcagtacg caaacgcaac cagcttggca
     9721 gattttgctg gcgcaaaaat cactgcccag caaggggttt acctctatga tttgattgac
     9781 caaattgaag gggctaacaa acagactgcc atgggagatt tctcacaaat ccgtcaagct
     9841 ttagaatcag gcattataga cgcctatgtt tctgaacgtc cagaaggtcg tacagcagaa
     9901 gctgcaaata aagctttcaa aatggttgaa ttggcagaca gttttgaaac caatgccgaa
     9961 gacgtgacca ttgctgtcgg tatgcgcaaa gatgacgagc gtatcgctca ggtcaacgaa
    10021 gtcttagcaa ctatttcaga agaagagcaa atcgcactta tggatgatat gattgaaaac
    10081 cagcccgttg aagaagccag cgagggtgaa acacctagtt tcttcgccca agtttggaat
    10141 attgttgtta acaactggca acaacttctg cgtggaactg ggatgacatt actcatttcc
    10201 atcctcggta caattatcgg tactgctatc ggtctcctca tcggtgtctt ccgtacagct
    10261 ccaaaagcag caaacaaggc acttgctatt ggtcaaaaag tactcggttg gattatcaat
    10321 atctacatcg aaattttccg tggtacgccg atgattgtac aatccatggt tatttactat
    10381 ggtaccgccc aagcattcgg actcaatctt gaccgcacac ttgccgctat cttcattgta
    10441 tccatcaaca caggtgccta catgagtgag attgtccgcg gtggtatctt tgccgtcgat
    10501 aagggccaat ttgaagctgc tactgctctc ggatttaccc ataatcagac catgcggaag
    10561 attgtccttc cacaggttat tcgtaacatc ttaccagcga ctggtaatga atttgtcatc
    10621 aatatcaaag atacttctgt attgaacgtt atctcagttg ttgaactcta tttctcagga
    10681 aatactgtcg caacccaaac ctatcaatat ttccaaacct ttacggttat tgctattatc
    10741 tacttcatcc taacctttac tgtgacacgt atcttacgca cagttgaaaa gcattttgat
    10801 acagatacat acacaacagg tgcaaaccaa atgcaagtcg aggtgccaca tgactaaaaa
    10861 tgtaattctt gaaatcaata atctaaagaa atcatacgga caaaatcaag tcctcaaaga
    10921 catctctatt agcgttgaaa agggcgaggt tatctcaatc atcggttcat ctggttcggg
    10981 aaaatcaacc ttcctccgat ctatcaacct tttggaaaca ccaacagaag gacagattct
    11041 ataccacgga caagatgttt tggctaaagg atatgacttg acgacttacc gtgaaaaact
    11101 aggcatggta ttccaatcct tcaacctttt caacaatcta aatgtattgg aaaatgccat
    11161 tgtagcacaa actacggtac tgaaacgaga tcgagctgag gcagagaaaa tcgccaaaga
    11221 aaatctcaac aaggttggca tgaccgaaca gtactggcaa gccaaaccaa gtcaactctc
    11281 tggtggacag aaacaacgcg tggccattgc acgtgcccta tctgttgacc cagaagttat
    11341 cctctttgat gagccgactt ctgctctcga tccagagatg gtcggggaag ttctcaaaac
    11401 catgcaagat ttggcaaaat caggattgac gatgcttatc gtaactcacg aaatggaatt
    11461 tgcccgtgac gtatctgacc gcgttatctt tatggataag ggtgtcatcg ccgaagaagg
    11521 cagccctcaa caaatctttg aaaatccaca ggaagaacgc acacgtgaat tccttcagcg
    11581 ttttcttgga taaactcaat ctgttccata gaagactatt acttaccagt ttcaaagctg
    11641 gtaagttttt ttagaccaaa aaagaggaat tcgcagaatt cccctccttt ttggacatct
    11701 ctaaatgaaa ccatttagat tagttttcaa atttcttgtg gtttttgtcg taaaaatcaa
    11761 tcaaacccaa ggcagttgca aatgaaatat tgtcaatctt agcgcgacct tgtgcaagag
    11821 cgataactga catttcacga gcatttgttt ccttactgat acggtaacct gtgattttct
    11881 tttcacgaac ccagccgaca actgcggcaa ctttttcgta actagtcatg agaaacccct
    11941 ttccttttta ttcgtgcaat taagtataat acagttaaac ctattttgtc aagtaaattg
    12001 ttcggttttt accatcattt tgctctaaga gatgatagta tttgcgtcct tatgtcttcg
    12061 accccctccg gattccccgg aaggaagata gtttgattac ctccttgtgc aaaattattg
    12121 agagtatcca agtattggtt ggtcagcaag atagacataa tctgctcttc agataggcta
    12181 acatttgatt ctttcagttc acgaatcgaa tctgccagtc cgtctacaat cgccttacgt
    12241 tgttgtgcaa tacctacacc atgcaagcga tccttttcag cctctgcttc tgctgctgtg
    12301 acaattttaa tcttgtcagc ttctgccaat tcttgggccg caacccgttt ccgctgagct
    12361 gcgttaattt cattcataga ttgtttaacc tcggcgtctg gctctacctt ggtaattaag
    12421 gttttgacaa taacataacc gtaggttgac atttcttctg ctacttgttt ttgtacctca
    12481 agtgcaatct catccttttt ctcgaagagc tcatccaagg tcaatttagg cacagatgaa
    12541 cgcagggcat cttcaatata ggacttaatc tgtgcttctg ggtgcatgag cttgtaatag
    12601 gcatccgtca cattattttc atttactcga tattgagttg ccacattcat tgtgacaaaa
    12661 acgttatcct gcgtcttggt ttctaccaca atttcacttt gcaacatccg caattgaatg
    12721 cgggctgcga tgacatcaac tccaaatggt attttaaagt taatacctga agtagatgtt
    12781 ttttggtatt tcccaaagcg ctcaataata gcgaccgtct gctgcttgac aacgtatagc
    12841 cctgaagcaa tcaaaatcaa agcaatcagt acgaagaaca agaaaccgcc aataaaaaca
    12901 attggaccaa gtaccataat gacctcctaa actagcattt tataaagcga atcattttca
    12961 tgaagattga tgtactgggg atcaaactct tccaagcgag aaataaactg cgtataatct
    13021 gttttatctc ctagggcaat accgattaga accggccctg ttcccttatt ggcacgtttg
    13081 atatattcaa aacgagtaat atcatcattt ggccctagaa tatcatttac aaattcacga
    13141 agagcccctg gacgttgtgg aaaattaaca acaaagtagt gtttaattcc ctcgtagata
    13201 agcgcacgtt cctccatttc cggcatcctg ttgatgtcgt tattaccacc agaaatgata
    13261 caacaaatgg tttgcccctt gatttggtcc ttgactacct caagagctgc aatcgttgct
    13321 gctcctgctg gctcagcaac aatacccagc ttagaataga ggtctaaaat agtcccagaa
    13381 atccatcctt catccacacc aatcaggcga tctacgtatt tccgagccac ttcgtaggtc
    13441 gacttaccga ctttctgtac cgcaataccg tcagcaaatt tatcaatttg gtctaattta
    13501 accggacgac ctttatcaaa agccgctttc attgaccgtg ccccacttgc ttcaacacca
    13561 acaatcttaa tttcaggtgc atgttctttc agataggccg aaacgcctgc aaccagacca
    13621 cctcctccta tgggaactaa aatttggtca aaactaatgg tttgctcttc cgcttcttcc
    13681 aagatttcat aggctactgt tccctgacca gcctgcacat tttcatcatc gaatgggtct
    13741 ataaatgttt tcccactttc ctgagtataa tcttgtgccg ccttggctga ctcatcaaag
    13801 gtatcaccta cgagccgaat ctctacgtag tctcctccga aaaatttaac ctgccctatt
    13861 ttttgttgcg gagttgtaat gggcataaaa atcgtagcag gaatttgcat ttcctgacag
    13921 gtgtaggcca caccttgagc atggttcccg gccgaagcac agaccactcc gcgtgacttc
    13981 tcatcatctg tcaattgtga aatagcataa taggctcctc gaattttaaa agagcgaaca
    14041 cgctgttcat tttctctttt taaataaata gttgcaccat atttttccga caagtatcga
    14101 ctataatcca agggggtacg tactaccacg cgcttaagaa cggagtatgc ttgttctaca
    14161 ttttttgctg taatcatagt tccattaatt tctttctata tttattgtat cattattccc
    14221 tagaaaatcc tagtatttat acttatattc aagctactag catgttattc aacagaaaac
    14281 gaatgtttaa ttttgtaaag atctatttat gaacaaaatg ggcaaaagag ctggaaaaac
    14341 cagctctttt attcattttc ggagataagg gaaaaaggga atgacatccc ctcatccgcc
    14401 aactcaaacc ttaaatgtat tgccatcact caaagtaaag ctgactatcc ccctatctac
    14461 catgttagtg tttaattata gattttgaat gcgtcgtcat cattgcgtcc gacaaatggc
    14521 attgctttgc ggagttctgc acctactttt tcgatttcaa gattctctgc ttctttacga
    14581 taagcttcca tacgtggacg gcctgcttta tagtcattta caaagtcatt tgcaaattta
    14641 ccagattgaa tatctgcaag gactgccttc atgttttctt tgacttggtc tgtaatcacg
    14701 cgtggacctg atacatagtc accaaattca gcagtgtttg agatagattg gcgcattttc
    14761 ttaaagccac cttcgtagac aaggtcaacg atgagtttca tctcgtggag aacttcgaaa
    14821 taagccaatt ctggtgcata gcctgcttct gtcaagactt caaaaccagc ttgcataaga
    14881 gctgtcaaac caccgcagag aacagcttgc tcaccaaaca aatcttcttc tgtctcttct
    14941 ttgaaagttg tttccaaaag accaacacgg gctgaaccaa caccttttgc ccagtccatc
    15001 gcaatatgtt ttgcattgcc agttgcatct tggtaaacag catagagggc tggtactcca
    15061 aaaccttctt caaaggtacg gcggaccaag tgacctggac cttttggtgc acacatgaag
    15121 acatccacat ctgctggtac cttgataaat tcaaagtgaa cgttgaaacc atgagcaaaa
    15181 ccaagggcat tgcccgcttc caagtttgga gcgatttcgt cattgtaaag gtctgcttgg
    15241 atttcgtctg gagccaagat catgatgaca tctgcttgtt ttgctgcttc tgctacttca
    15301 aaagtttcaa aaccgtcttc ttttgccttg tcaaatgact tacctgcacg cacaccgatg
    15361 atgacatcgt gccctgtatc acgcaagttt tgagcatggg catgaccttg tgaaccataa
    15421 ccgataacgg cgatacgttt accgtcaagt gctgctactg ttacatcttt ttcatattgc
    15481 attgttactg tcataatttt ttctcttttc tatttttatt tgtagttttg gatgttcaaa
    15541 gaaaatgaag gctagaccaa gcgatgtagg cgaagataga actaacgttc atcaagccaa
    15601 atcaacgcag gataggtttt attatcgaaa aggattagtc tctactaaag ccagtcgcac
    15661 ccgttcttgc gatattctta atgccataag gctgaatcac ccgcaggagg gcgtcaatct
    15721 tatctccatc acctgtcatt tgaatggtaa tggagtgcgg tgccacatca acaacatttg
    15781 ctctaaaggg ttggataatc gctaaaattt ctgctcgttt tgttggcgga gctgaaattt
    15841 taacaagaat cacctcacgc tctaagtggg gaatgtccgt caaatcacgg acacggacca
    15901 catcaatcaa gcggttcagc tgtttgatga tttgttcgac ctcatcgtga ctggccacgt
    15961 ctacaatcac cgtcacacgt gagatgccat ctacttctgt tgggccgact gagatggact
    16021 caatattgat ttggcgacga gataggacac ctgtaaaacg attcagaaca ccagatgaat
    16081 ttcgcaattt agctgttaac attctacgca ttgaacttca cccccaacat ttctgcattg
    16141 ctcttacctg ctggcaccat cggttgaaca tgttcacgat tagaaatatg aacctctatg
    16201 agcattggtt tatcttctaa gataactttc atatcttcac ttagagtcgc tggattgtca
    16261 aaactataat gactaattcc gtaggcctct gccaacaatt ggaaattcag ttcatcgtca
    16321 aagacagatt ggctacgacg cttttcatag aaggattcct gccattgacg aaccattcca
    16381 agagagtggt tattgatcaa tacaacctta atcggtacac catagccatt caaaatagcc
    16441 aattcttggt tggtcatttg gaagccgcca tcaccgacaa agatgattac ttctttatct
    16501 ggattggcta atttggcacc gatagctgca ggaataccaa agcccatggt tcccatgcca
    16561 ccagatgtta caagttgacg tgcatgtttg taggggtaga attgagcggc ccacatttga
    16621 tgctgaccaa catctgtcac gacaatggca tccccttgcg tcaactgacc aattaattca
    16681 attgccgcct gtggcttaat aaccttttca tcttcatcat accaaaatgg cgcccgacgt
    16741 ttgttttcca atacttgtgc cgtccaatca gcatagcctg tttcgactgt ttctaaagca
    16801 agcagagctt tcaaggttgc cttagcatcg cccactactg gaatagccgt tttgacaact
    16861 ttaccaattt ctgcgggatc aatatcaata tgtgctaccg tcgcatttgg cgcataggtt
    16921 gttggatttc ctgttaggcg gtcatcgaat cgcgctccaa tattgataat gtaatcagcc
    16981 tgatccatag ccatattagc agcgtatgaa ccgtgcatcc cccccatagc caaggataat
    17041 tcatgctcaa tgggcattgc acctaatcca aggagggttg aaactactgg aatacgatag
    17101 cgctctgcaa aggcaactaa ttctttattg gcatctgcat aattgacacc accaccagcc
    17161 aatataactg gtttttgagc ttggctaagc tgtttcaaaa ttttcttaac ctgcaaacca
    17221 tttggttcaa cagtcggttg ataacttgga agttgaacag ttggatcgtg ataaaaatca
    17281 actactctct cttgaatatc ttttggaaca tcaatgacaa ccggacctgg acgaccagtt
    17341 gttgcaatat gaagcgcctc tgtaatcaca cgaggaatat ctgccgtatc tcgaatctga
    17401 taattatatt tcgtaatggg catggtcatg cctaaaacat ctgcctcttg aaaggcatcc
    17461 ttaccgatcc cccgtgtagc tacttgacct gtaaagacca acaaagggac gctatctccc
    17521 attgcatccg caatgcctgt gatggcattg gtagcacctg gcccagaggt tacaatggct
    17581 acgcccacct ttcctgatga tttagcgtat ccttcggcct cgtggaccgc tccttgttca
    17641 tgacgagcca aaatatgttg gattccctca tattgataga tagcatcata tagaggcaaa
    17701 actgccccac caggataacc aaaaacaagg tctactccta gctgatgcag ggtgtccaaa
    17761 atgagatagg accccgaacg cggttggtct agttgaattt cttgcacgaa tattcctcct
    17821 ctctgcaaat ttgttatcta ctatattatc acaaggaagt agaatgtcaa gaaattttct
    17881 gaaaattcct acatttgttc gttttcttaa cgatttccta acattttctt aagtaaaact
    17941 taagtaaatc ccttgactgg cttggtttca gcttgctttt agaaaacttc agtatagtag
    18001 tcccaacaag aaaaataaat gaggtttagg atatgtatta tgtagcgata ccggcttacc
    18061 agccagatga aaaattaatc caactattag aaataatgaa aagcaggcta aattgtcagg
    18121 tcatcgttgt ggatgatggt agtactggcg catccaaaaa tattcttgaa atcgccaaaa
    18181 cctatgccat tgttctccac cacgatgtca acaaaggaaa aggccaagcc ttgcggactg
    18241 cctttagttt catccaagat ttgagaaagc ctggtgtcgt tgttaccgct gatgcagatg
    18301 gtcaacacgc tgtaaatgat attgaccgca tcgcccgtgc agctatgaat ctgccaagtc
    18361 gcctcatcct tggcgtccgt caatttacta aggacattcc ctttcggagt cgttttggta
    18421 acaaactaac cagagtattg tttagattgc aaactggtgt caatgtgtcc gatacgcaaa
    18481 caggcttgcg tggtttccat actgacttaa ttccattcat gttagatatt gaaggcgacc
    18541 gctatgagta cgagatgaac atgttaactc aggcaagtca acgctataaa attacggaag
    18601 ttccaattca aactatttat atcgatgata atgccagttc gcattttcgt cccataaaag
    18661 atggactgct catttacaag aatctcttca aatttgccct ggcatctttt ggtggatttc
    18721 tagttgacta cggagtgtat gcacttgcct tattactact cactagctta ccaactgctc
    18781 tacgcttatt ggtcgcaaac acgattgctc gcatttgtag cgctacctgt aattttgcac
    18841 ttaataagaa attagtcttt aacaatgaag agagcatcgc acaaacaggc accggctact
    18901 ttacactagc ccttgtcctc ttcctttgcg atacggccct cctctatctc ttccaccaaa
    18961 ttctaggact caacctctac attgtcaaac ttgcagttgg tatcttcctt ttcctagcct
    19021 cttggtttgt tcaaaagaat attattttta aagaaaggaa atcattttcc catgaaattg
    19081 cttaaaaaac cctttgccta cgcatccatc ttcggaatgc ttttgacagg aggctttact
    19141 tactccatgt taaaaacctt cgtgctttcc gaggctatca caacggttgc tgcaagtaat
    19201 gccacagcca atagccagaa cacagctact tcatcgtcgt caactgccgc aaccactgca
    19261 acgaatgtct ctacaacgga tactagttac actgatgaca atatccaaat caacttagag
    19321 actatcacta ccaacaacac aactgtttac gtcgcagata ttcaagtcag ctcacccgag
    19381 tatttaaaaa cagcacttgc acaaaacact tacggtacaa acgtaacagc taaaacctca
    19441 gagacagcgg cagcaaacaa tgctatctta gctgttaacg gtgactacta cggagccaac
    19501 tcggctggtt atgttattaa gaatggagtt ctgtatcgag acaccgttcg ggacaatgca
    19561 gcttacggcg acttggcaat ctacgcagat ggctcatttg aggtcattta tgaaaatgag
    19621 attaccgccc aagaattgat tgacaagggc gttgtcaacc tcttagcatt tggtccatca
    19681 ttggtcgaaa acggcgaaat tgtcgccgat acttcaacag aagtcggacg tgcaatgtca
    19741 tccaatcctc gttctgctat cggaattatc gatgaaaacc attatatcat cgtcgtggcc
    19801 gatgggcgaa catctgaaag tcaaggactt tctctctatc aaatggccga ggttatgaag
    19861 cagtatggtg cccaaacagc ctataacctt gacggtggtg gttcgtcaac cctctacttc
    19921 aacggccaag tcatcaacaa tccaacaaca aacggaaata ctatctcaga aagggcggtg
    19981 agtgacatta tctacatcgg ttactaattc aactacaaga gtttcaagaa catttatctc
    20041 ctacttagca ataacagctt tcctgtttat tttcagtcga atctatgaaa gtctcagcta
    20101 tggcgaagtt tcaatcttca tgcattatat gttctgtgtg accctgattg gcggagctgt
    20161 gttactcggt ttgctgcaac ttatgcctac tctttcacgt ctctcttata atttgtggaa
    20221 ttctggcgtt gcaactatta cagctggttg tcttctccga ggcattatca acctatctgg
    20281 acgttcaact accttagatc aaccttattg gtacatcggc gcaggattct tagttctatc
    20341 tttagtaggt cttttcatca atccatccgc aaacaattat cgaaaaacga ccacttaatc
    20401 tacaaattaa ttgcaagggc acttaacatc ttagatgcct tttactgtag aatgaattat
    20461 tgaaaaattc ggaaatttcc aattagttat caaatctttt atcgtttctt tcatatctat
    20521 gatataatgg gtgaaataag atagggagaa gagtaatgac cgaaaaagaa acactaaaaa
    20581 acctccgtca tcgtagctct gtctacgatt cgatggtcaa atcacctaac cgtgctatgt
    20641 taagagcaac tggaatgacc gatgatagtt ttgaaaaacc gattgttggg gttatttcga
    20701 cttgggctga aaatacaccc tgtaacatcc accttcacga ctttggaaaa ttagccaaag
    20761 aaggcgtcaa agaggcaggt gcctggcctg tccaatacgg taccatcacc gttgcagacg
    20821 gaatcgctat gggaactcct ggtatgcgct tctcactgac ttctcgtgat atcatagctg
    20881 actctattga ggcagctatg ggaggtcaca acgtggatgc ctttgtcgca atcggtggct
    20941 gtgacaaaaa catgcctggt tctatgattg ctatcgccaa tatggatatt cctgctatct
    21001 ttgcctacgg tggaaccatc gcaccaggta acctaaatgg taaagatatt gacttggttt
    21061 ctgtctttga aggaatcgga aaatggaaca acggcgactt aaccgctgaa gaagttcgtc
    21121 aaatcgaatg caatgcctgc cctggacctg gtggttgtgg tggtatgtac acggccaata
    21181 ccatggcaac agccattgaa gtcatgggca tgtccattcc aggatcttct tctcaccctg
    21241 ctgaatctcc tgagaaaaaa gcggatatcg aagaagctgg tcgtgccgtt gtccgcatgt
    21301 tagaactggg tatcaaacca tctgatatta tgactcgtga agcctttgaa gatgctatca
    21361 ctgttaccat ggcactcggt ggttcaacca acgctaccct tcaccttcta gccatcgctc
    21421 atgctgccaa tgtcgacctc acacttgaag acttcaatga tttccaagaa cgagtacctc
    21481 acctagctga cctcaaacca tctggtaaat acgtattcca agacctctat aatgtcggcg
    21541 gcgtccctgc ggtcatgaaa tacttgctca aaaacggctt cctccatggt gaccgcatca
    21601 cctgtacagg taaaaccgtt gctgaaaact tggaaaactt tgcagacttg acaccaggac
    21661 aagatgtcat tatgccactt gaaaatccaa aacgtgcaga tggcccactc atcatcctca
    21721 aaggtaatct ggctcctgaa ggtgccgttg caaaagtttc tggcgtgaaa gtccgcaacc
    21781 atacaggtcc agccaaggtc tttgactcag aagaagaggc gattgaagca gtcttgactg
    21841 acgaaatcgt agatggagat gtagtcgttg tccgctatgt tggaccaaaa ggtggtcctg
    21901 gtatgcctga aatgctatca ctttcttcta tgattgtcgg aaaaggccaa ggtgacaagg
    21961 tagcccttct aacagacggt cgtttctctg gtggtaccta tggactggtt gttggacaca
    22021 tcgcacctga agctcaggat ggtggaccaa ttgcctacct tcgtactgga gatttggtaa
    22081 ccgttgatca agataccaaa gaaatcacca tacacgtttc tgaccaagaa atcgaggaac
    22141 gcaagaaaac aacggttatt ccgccactct actcacgtgg agtcctcggt aaatatgccc
    22201 atacagtgtc ttctgcttct aaaggagccg ttaccgactt ctggagaccg gaacaaactg
    22261 ggaaaaaata aaagaactcg taagtccaca gggaggaaac tatatggtca aactacaaga
    22321 ttcgacctct cctctgactt ccaataagca accgcataag gaagagaaga gaagagaaga
    22381 gaagagggct gtagttctag cgggggacta tggttatatc cgtcaaatcg aaacaacatt
    22441 gaaatccttg atttttcata atagtcatct taagatttat atttttaatc aggatatccc
    22501 taaagaatgg tttattcatt ataaatcgtt actaaatcaa attggtagcg atttaatcga
    22561 tataaaatta ttagacgtcc ctctaaatag agactggtat gctggttttt cacatattac
    22621 atacatggcc tttgctcgat attttattcc tcaatttgtc tccgaggaca aagtattgta
    22681 tctagatagc gacatcatca ttactgattc cctagacaac ttattcacta ttgacattag
    22741 ccaacactat ctagctgtcg ttcgagcaac atttggctac ggactaggtt ttaattccgg
    22801 tatgatgctc attaacaaca aacgttggaa agccgaaaat attactacta aattagtcga
    22861 aaaaacagaa caggaaaagg attccattca agaaggtgac caaactattt taaacttggt
    22921 tttaggtcac gaagcaattt ggttagatga tacctataat tttcaaatcg gatttgatca
    22981 aggagccttt tcctatcgcc atcagcatct atttgaactc agcttagacc ctttgcctaa
    23041 aattctgcac tatatctccg gagacaaacc ttggaatact tattcttctg gacgtcttcg
    23101 tgatgtatgg tggcactatc acttcctagc ttggacagag atcctgaaaa aatgggaaaa
    23161 tattcaaaca atgattccta aaaaacactg caagggaaaa ttactcataa tcaccaatac
    23221 tcattggttg caaaatattg aataccttgt taaacagctt cctgattatg aattccatat
    23281 cacagctttt acagatgtcg cgaataattt aaaacaacta agtagccaag aaaatgtctt
    23341 catctatcca catatcatcg cttatgtctt agtagatatg ataaaaaatt gcgatatcta
    23401 tcttgatatt aaccatggga gtaaattaga tgaattgcta gagcatgtca ttgtaaatca
    23461 aaagcccgtt ctctcttttg acaatatcgc agcaccaatt tttgagaatt attcacacag
    23521 acaagtcttc tcctatcacc ttcccgaaaa ctttgttact gcagtgcgat tacttagcga
    23581 gtaaaaaagg agaaaaaatg aaactaaacg tcgaactctc ccgctttcgt gtcaaagaag
    23641 gcaaaaccgc tcaagtagat gaatggatgg cctttctcaa cgagcacatg gaagacaccc
    23701 ttctcactct tgaaggagag aaaatgtatg tcgaaaccat cttccgtgag gtattggacg
    23761 gacgcgaata cctctattgg tactctgtcc aagccgaagg aggaattgaa gtcgaagatt
    23821 cagaatccta tatcgacaaa aaacatttgg aatattggga aaaatgcatc gacccgagct
    23881 atggtatggt cgatttggat ccacaagtta tcatgattcc caagcctgtt tatgaaacca
    23941 tggaagaatt agacagacag tacgatgaaa catttaaaaa atgagttgct cagtacaact
    24001 cattttcttt tcggactaat acccaatgtc atccgtccta gacggctgat gcgtgtcatt
    24061 ttccaagcag gagaccagac aatttcaact tgtgcatctt caatgccatc aatggtcttc
    24121 aaggctgtaa caagctctcc tggcatagta tccgcacaag aacaacctga gtctgtaaag
    24181 gtcataatga ccttacaaaa accagcttca tcaatattta tctcgtagac caagcccaaa
    24241 ttataaatat ccaattcaat ttccggatcg taaatagatt ccaaaacctc taccaactgt
    24301 tctgacaaaa caagggctcg ctcattgatc tgaatatctt ctctcattta tccaaacact
    24361 cctaaaacat ttataaaaag tattgtatca taattatttg aaatatactt gtcttatcag
    24421 atgttttcat ctagttttca aagtgtacga acctctgaat tctcaccttg accaatagaa
    24481 aagatatact tatgaccttg agtcaagcta tgatagaagc catgaccagc ataaatctga
    24541 aatacttgca ttgtatcact agactcatct ttatagatat gttgataata aggattatcc
    24601 gcaaaaactg tctttagata gtcgttctcc acaggtctgg cagtcccttc tacacgcact
    24661 acctggataa ggtacccttc ctcagaaata gccgtcatcg caactctttg atcccccatc
    24721 aattgatcat agaaatgcgt ttctgggctt gtcataaaga aaatcccttc ttcgtttgct
    24781 gcagtgatat gagcatgacg agcatgtgga tttccatact catccagagt tgcaaaaact
    24841 ccaaccttca tatcttccaa aatatgcata atatctttta gttccatggt atcacccctt
    24901 gaaaacacct attttctaaa gtatatcaaa aacaagcgaa aatgttaagt gggatattga
    24961 tagaaatggt gaaagtgttt catgaacaac tccctactga cagaaccatt aaagaaggta
    25021 gctatgtttg cttcattttc aaccttcaaa ggttcctcaa cccttttgat ttccaattgg
    25081 tatagatttg actctgaacc gattatgaca tcaatcaaaa tccgttgtaa ctataaaaac
    25141 tacctaatta taaaaaagcg actcttgagt gctttgaacc gttgatatat cgaggtatgt
    25201 aaacgtttac taaacaggtt tgctttacgt gctttcttaa gacctggttt tgggttccaa
    25261 aagtaaaatc tcaataaaag cctattaaag caaactttca aatagattac caaaaactcg
    25321 ttttcggagc ttatatagtt gagaaatgga taagcaagtc gtcatagaat gacttgtttt
    25381 tttattccct gattcgagtt attttaaata ctaatcactg ctcaatattt atctttaatt
    25441 ccctaaaatt taccggttca aatgacttta tatgcaaaat accttctagc tgtaatggta
    25501 attgcttaga gaccaacctg cctataaaag gttgacttgg tgtaatagaa cgctgcagaa
    25561 ttccaatttg cattttaaat gctttctctc taccatcact taatttctta tatgtttccc
    25621 cttgcatact ccggtatatc gtttctgtta agggacgaac ttcatatgag tcaattggat
    25681 ttttgcaaac aaaaccaaaa gatgcatcac tttccacaaa atgtgtagta aaaattttaa
    25741 actcaacctc attagttgat atatatttaa tagaaacttg taaattctct atatcaggta
    25801 agggtgtata tctcgaactg ccacttatca cacttcgcat ttgttcaata gtattatcta
    25861 atccttgact aaataaatca atgtagtata catctgttaa aatagctggt atcttgcaat
    25921 cagaaacctt tattgggaca aatttaactc cctcatagag agacttagtt agagccgctt
    25981 gccattcttt tttgaccatg ttgctattca agctatttga tgatagaaaa taaaaaaatg
    26041 ttgtaacttt ttcaagccct tcatccattt tgcctataat actatctcct ggttgcatag
    26101 accatttatc gtagaaaata ttatctcgtc caaactcaat ctctaatcgt ttagcaatca
    26161 tatctactac atcttgatct ccgtgattat aactaataaa aatcatctct tcctctttcc
    26221 attcctcatc tagatacttt tcacctataa tcaaaattat ccaacatatt gaataatttg
    26281 gtgccctagc aacactgtat tctactgtat cctactgcgt tctactgcgt tctactgcgt
    26341 tctactgcgt tctactgcgt tctactgcgt tctcagtata aaatgaaatc tattttgaag
    26401 caagagtgta gtattgattt ttgtcatttt tactattgcc ataccatttc aagagtcctt
    26461 gatctgtcaa tttttgcaac acttttccta tatgacgtct gcttctacca gtcaattcaa
    26521 cagcttttgc cgttgtcatt ctctcgcctg agttatacat atagtggaca atcaattgct
    26581 cgtctgctgt taattcacca aaatcagaga actgtttttc caagctgtct cttgtacgga
    26641 gatgtcggct gacaatgttg ttctcaagcg tcaggacaac cttattccca ggttctgaga
    26701 atttaggttc atgtagaaaa gcagattcca tctccgagta gatacgttta acaccttcat
    26761 tcatctcacg tacccaaccg aactctgtca aggttctggc aatgcgaggg tttcgtgaaa
    26821 atcgttcatg cttgatattg tcaacggtga cgatattggg taatttccct gggctatgaa
    26881 tctctagtcg atcatcaaac ataagcacac gaatgtgatc accatagaca gaataatcac
    26941 ggtgagttac agcattgaca acaccttcaa accaggcaaa ttcaggatac tcaggcaaaa
    27001 tttggaattg cccattgtca tccaaatact gaaattcacg aagctgagta cgaataaaat
    27061 ctcgtacctt gataatcaaa attgggagag catcatcaaa ggttacttcc ttgataacat
    27121 taaaactact tccagttccc atatctgtac catcaaatcg ctggaatcgg acacgcgctt
    27181 gagggaagaa tgctgacgga tatttgccaa agagtaaaat tgctgccttg gttaatttcc
    27241 cattgattag aaatcgacgt gctttaagga tttcttccac agaacgctct gatatatcaa
    27301 aacgattttt aaaatcctga accaagctat cgtcaatatc tttcagacgg gcatcaggga
    27361 cgacctcatc ttcaaagaag cgttgtcctt tatcataact gagttgagtt cgttgctcat
    27421 aactcaactt gacagagtca tctccttgac gaagatagac atcatcattt ggtgctgcaa
    27481 tcacacgatt tgatgacaat tccacagaga taactaaaat gaaatcttct tcacccttat
    27541 gattgattac agggatttcc tcaaaagata aatccaaagg agtctcacgc atctcacgat
    27601 caatcttttt gaaatcgtct atgggataag ccctgccgtc cttgaaacca gtgataatat
    27661 tttcctgttt ctcatcctca ataccaataa ccaattgacc gccatccgca ttggcaaaag
    27721 caatcaggtg tttgagaagt tcagacggtt tctttctggc tgattttcga tctaggtatt
    27781 ggctttctgg tgagaattgg tagtgggata atggtttctt atacttcaaa ttaaaatctc
    27841 ctttctagta ttaatttgcc ttcttttacc cagaggcact cttagaaaaa tcaatatttt
    27901 gaatagatac agcattatct attagttcaa ataactcttg actatttatt gtcatatcaa
    27961 aatcattcat agaatctagt gaaaacaaga cataatattc actttcctca ggtaaatcaa
    28021 aaatcatttt aatttcttct cgattttcat ccatcttttg tttgaaagcc atcctcggat
    28081 agatagtata ttctaaaaat tgcagttcag ccccaaataa ctccaaagat attatctctc
    28141 tagtattaac gacccctatt tcgactccat cctctaattc aggatgactt gaagcataaa
    28201 acttctcctt atcaaaagta aaagcaattt ggtttttatt tttgattgct actaatctat
    28261 tattgataaa tgattcaaac aaaatttttg taaaatagac atcatcatta ctaattttat
    28321 gtggaaactc aaaggtaaca gaaaaaaatc tttgtatttc tctaagtgct tcaaaaaaaa
    28381 tgtgattctg ctgaaacgct tcaatttgat tattatcagg taccaaagtt ttattaaata
    28441 tctttatacc agttgtaaag aacgacctga taatacctaa atttttaaaa taatcatcca
    28501 aggttattaa atgtttataa tttagtttca ctgtcatctt gatgttattt gattcttcat
    28561 ccaatattat ttctaaatca atcaactgat ctctacttga aacaattttt attttcgtta
    28621 agcttggata cggaactctt tcaacaggta atagaagtct ttcctctcca ctctcgactt
    28681 ctaacggttc caacgcagga aatttctcag cagaacctat catttgtttt gtaacacctg
    28741 aactccctaa atgaataata gttggaggat tctcttggag cgattcatct agtataaaaa
    28801 ttttttgagt cctatacata gcctcaacta attcattgat attctgtatt ttcatacctt
    28861 caaattctaa cggaaactta atcctcactt gaaagctatt ctctttacga ttctttctag
    28921 aacgcaaaac atacatatcc tccgttcctt ccatcaattc atatgagtat ccttttggag
    28981 cctctagatt aagttttttc cttaaagctg ttggagcctt tatttctttg ttattcgttc
    29041 tagaaaatac tgaattaaac tttgaaatag tcatcaccaa tcctccttca actcatcata
    29101 aaccattatt tttgatatta gaatatcttt ttcttgagat gatagtcgcc gtccttttcg
    29161 ttttccacgg ataaattgaa tcaacctatt tctattttga acagtatcaa caaatatata
    29221 tctgatatct tctacatcga attttaatac accgtcacgt gtttgcagaa tactatctgt
    29281 atatattttg ttaatttctt cagcacgaat ttcctcttcc tcaattaaca ttaatggaag
    29341 ttccctagga tttaatttag gaatgtatct ccactcatgc tcatcttgaa aattcttttt
    29401 tatttcgata acattgttat ctctatcccg gcgtttcatc ttacctgtgt aaggtttaat
    29461 catccgaata tactcaaaaa taaaattcat taggatatca ctatcctccg aatagtcact
    29521 atccttattt atcaatatat tcaaagcagc tgtaagttct tccacttgaa cagagctagt
    29581 atttaaataa tgaattggct gtatcccttt tctaatacca aactctttat gaaaagctat
    29641 tgaaaattta ccatagccct tgtcatttaa taatattgaa tttccttcag catggtaact
    29701 tatctgatgt aacggaatat cacaaaaaca tgtcatagga atataccact ccgttaaatc
    29761 tttagagttg tatttcaaat ttagataact gatatcttca ggataatacc tcggacaaat
    29821 ggccatatta agtatggctt tttccaaata agaatactct ctcataaaat taaatagcgc
    29881 attagctgta atctttgatt gaataacctc aaaatcatct cgctcctcct tagctcgata
    29941 atttacaatt gttgtcattg ctcctcctaa atattaacta ttgcccttga tatccttata
    30001 atatgctcta ttttttcttc ttagccttag aaaaatttcc taatttagat tttatagtat
    30061 ttgcgcatac ttcagtcaat ggctccccta ttgcttctct atagttaaaa cctaacagtt
    30121 gcattgtctt caaggtatct ttattcagta gttctgccat ctgttgaaac gatacagttt
    30181 gttcttcagt aacattccca aatgaactaa ataaagaaat aattcgaata agggtattat
    30241 ggagatattc tatatcctca tccttaatag tgaccttttc atattcttct ttatagattt
    30301 gtgcaatccg gagagcctct gccctttcaa taattaactc attaacaatg tcatcgtaag
    30361 cacttctaag tttatctgct tcacgctcag ttttcattga ttggatttta ctatttattt
    30421 tagctgttgt tcctttgaca gctaatatac ctagttcaat tccagcattg actactgatt
    30481 ctgtaatata aggttccata ttcctacctc atctccttca ctttactttc aataaaggca
    30541 atttcatcct ctgaaagtct atattttcga tagagttgtg cgtctaactc agctaaaatt
    30601 aattgctacc gtaaattatc tactctatct tcaattcttt taacttcttc attcgtcaaa
    30661 tccaatattt ttatgaattg ttcatctata tcccgagtaa aatcaatcat tttttgattt
    30721 tctgtatagt ctaataagtc agggactaac tttgcaagtg aagaaagatt ttcatcagtt
    30781 aataagaatg caaaacgtat gaatttcgaa gaaacatagt tatagaaatt tgtagattct
    30841 attctcgtat caaaagcctt taaagcaaga cgactcctac caaatgcagt atatggctct
    30901 aatattgcca attggttatc cctcttctga ccaccagcat tagcgctaga tacaacaact
    30961 ttatatttat caattaaatc ttgcttaact ttaataactt ctcgttgtgc aataaaccaa
    31021 gttgcacgtc cagccttacc tgctttatca tttgcaagaa gtttaatttg agttttttta
    31081 tcaaattcct gaccattgta aatctcaact ttatcaggat ttagttcaac aaaattactt
    31141 tcaatttgga aaagcttttg attaatcgtt gatgaagatg acagaaagtt taaattatta
    31201 tcagcaacaa actttttaat tttttgaaca atcgattcat cagtaggata aattacaaac
    31261 gtctccttgc ctggataatt tctctgaata gccaaagttt ttccaccctc aactagcgaa
    31321 tactcaaatg tatcggatgt tttactatag tctttatgaa caattgaaat accatctgag
    31381 attgccactt ctccaaagat ttcatttgca tttggataat aaatcaagtg gctcaggtta
    31441 gtactgttta ttagctctat tccgaattca ttcattccac gaccagattg ttgcatccag
    31501 cgtcctccag gataaataag tacagaatga ttaggattca atttatcagt aattttttga
    31561 aataattgaa aaacattatt aaccctttgc tgctgaccag aaaccatctc tttttctgtt
    31621 gcactttcct gatacggagg atttcctatc actacatcaa atttcacctt gttaaatgcc
    31681 tcctcgacta gtttcttacc ttgttcaata tctgttttta ggatatctgt cagactttca
    31741 atgtaagtca cattggtttt gtacttccga tagcctgtca gtgtacgttc ggtgatggtt
    31801 tttgccattg gtgttttggc aatagcatag atattattcg ctaaaatctc ctgatagact
    31861 tggtcagctt caaaacggtt atcatcattt tctgccactc gttgataata caaactaatg
    31921 gcgctatgaa gaggatagag acctgtcttc gagttgatat ctaaaatttt agtttctttc
    31981 tgataaatag atgaggtaag ctcattgtct acccagtgaa gatttgacgt cgcaccatct
    32041 gtcaccgact caaagttatc atcatagaag ttcaaaccgc ctactgactt agatacttgt
    32101 agattgacca cgcgccaagg tgtcagtaca gtttccttgt cagggttttt aaaggttcca
    32161 aacagctctg caatctgctc cgcccgctcg atgaagtcca gatcatcaaa agattttgca
    32221 cgctgacgga taatacgacc cgcttcgata aagacctcag catcataata cttggtaatc
    32281 tcactaaaca ttccctttgt gaaacctttt ggcatgaact ctttccacga ttcatcatcc
    32341 acttgcttga taaagtcctg aatggtgatg tcttttgata aatcgaccgc catgccgtaa
    32401 atcatcattg gaatacggat agaaaccccg cgtaaaatag aaatcatatt tttccgctgt
    32461 ttcttcgctt ctttttgttt ttcgataacc tctagatctt ctgctgttcg tttagctttt
    32521 ggtttctttt tagctttttc agcttgctca tgctcttcag ttgtcaatcc attttcatta
    32581 attacaactt tcttaggcgt tttttgactc tgtgtcttac caacgatagc atttagtttg
    32641 gtaaacatgc ttgcatcatc agcggttaaa gtcagaagat tatcattata gagactgtca
    32701 tcttcgaaac ctgaccgcac tgccttttca gcataaactt tcttgagctg tgtcagcatt
    32761 ctatccacat cgtaggtctt cattccattg tctgaagccc ctaagattgg cataaagttt
    32821 agaagacgag ccatagcttg cttttgtgct tgcgtatttt tcttccctac acctgagtta
    32881 atctgggcac tctccgccat gacagtcaag gctctatcag gggcaaaatc aaagacataa
    32941 caatttgtct tcattcccaa tttctcatga gaaaaaggcg tctgggcacg aaaggcagct
    33001 tgtaggtagt tcatggcact attggtattt gacaaaaaca agactgctgt ccactctggg
    33061 atattaacac ctgtagttag tttacgaacc gtcagagtaa tggtttttgt ctgcgaaggg
    33121 tctttaccaa tagcagaacg aactttctct atgtccgcat cgttagcaat tccatcatcg
    33181 ctacttgctc ctcgaacaac attaacaatt ttatattctt tcccgaaaat agggtgttct
    33241 ttaagcgagc cctcaaaagc attagcttcc ttaacacctg gcataagcca aagcgtatga
    33301 cgcaactctt cacgataaga cttcgttgaa aaagggtagt tcgtacgact atctggatgt
    33361 gtgatattat ctaagaattg gcgaacctct tgcttataaa caagtttacc attctcagcc
    33421 acacggaaaa attccctaaa gttaaacgac ttactctcat cagaaaaacg ttccttatgc
    33481 ttcatttcaa aagtgtacat tgatactttt ggcaaagttt cataaggatt tggctcactt
    33541 ggacgttcta attcccactt cttcttagcc tgttgttcca tgacatagtc ccaagtataa
    33601 acttgctcct cgtcaaattg atccagaaga ttgaaggggg ttcctgataa ttcaagtatc
    33661 tttgtatgct ctttgaccaa ttctttcata acggtgtcac tgagctcggt ttgcgttccc
    33721 tcgtgcgcct catcaatgat aatcaaatcc caatccacat ctgcaaaatc tttcagattg
    33781 gtttgtccgc cattgtaccg aagcaattgg attgaagcaa aatacacaaa aggtttttct
    33841 cctcgcttca ggttttcaag cgtttctcct tgattgactg agccataatc atacccatca
    33901 gcgctcatct tcattttctt gaaatcatca aaccaagaat ccgccacaac agggcgatga
    33961 gtcatgatga gaactttttg aaaagcctca ttcttgacta attgcaagga cgtcagagtt
    34021 ttgccaaaac gcattttagc attccagagc attcggtctt ttttcttaaa gactttttgc
    34081 gtctgctcga ccgctgcctc ttgttctgga cgaagggtga taactggttc ttcaataaat
    34141 gattctttgg cagtaatatt tagataattt ctaccttctt taacagcttt aatagcagcc
    34201 ttagctgtct ctaaatccgt cttgaaccac tctgttcctt ccagttgttc agcctgttta
    34261 atccctgaac gcttcaagac attatgcaca tcataatcat gaaaccagga cttggtcgcc
    34321 tttttgtaag caagctctac ccaaccaagc gtgtaaggca gaccagatgt tttcatgtat
    34381 tgattaatac gttttggggc aacagtacgt aaaaagtcac tatttggcga ccaatctgtc
    34441 tcaatatcat ccgaagaaat gctaccctca ccaatttttt gagtcccttc gaaggcatta
    34501 aatagtccac tttcattgtt aactgtttga atatagataa acttccgctc agccgtagtg
    34561 tacatttctt gtgctctcgg ttctaaaaaa tgaccaattg cactggcttt aatatccggt
    34621 tcaatatagg tcagcatgac ccaagctagt atgtcaaaga cttgttttag tgattttaat
    34681 gcattttctt ttgtcgcatc ttctggatta aggacatggg cagaattatt cccttttccc
    34741 ttgatatcat aaaagtgatc gacgattgtt ttattgggaa taaagtctct tatctctctt
    34801 agtacgtcat taaaggtggc gcgctcacta atatctaaat attctctatc ggcaaccaac
    34861 ctcgctgtat tctcagcaac ttttctcacc ttagtcagcg tgccttcata gtccccatgt
    34921 gtataatttt cttcagccat atttatggtt ctaaaaagct cggctgtatc tatatcaatt
    34981 gccaaaaaat caaaatttga aatcatagcc taatctccta gtaaatacac tttttgaatg
    35041 gttatctctt ttatcgtatc tgctttttta acagattcat tctcaatcat aaattcatca
    35101 tctatatcaa aaaaactcag ttgtccttcc acgactgtcc gatcgtcttc tacttcctta
    35161 cccaaaagtt ctgaaagtgc aaaaggaatt tttcttacca aacttggatg acctttgacc
    35221 agttgccact cattgaacct gataggctcc cctgtaactg gatgctgctg agtcaaagta
    35281 tttcctctca caatattttt atgaataaga tagtgtgctg attgatagat atcattttta
    35341 ctatttagtc tagttccaaa agcttgctcg taccagtcta aataacaaag aaacatccgt
    35401 gaacgtgcca cttccaaatt atcttctaaa aactctatgc catagatgga cgagagagca
    35461 actaaagact ttgttttcca atttcgtttg tcatactgtc tgaccacagc ctctagcttt
    35521 ctctctaaaa ttgcttgcaa aaaatttcca tcgcctgcag atggctctaa aaaggtctta
    35581 tatacacttt cacaagcttc tttcactcca ggagtatcca gcattttctg aaccatccaa
    35641 gcaggtgtaa agacttctcc atgtttttga acacgttgtt ttgatttaat taagctctct
    35701 tccaaaacct actccttgaa aacgtttata tctccaccta ttataccatt ttccaacgaa
    35761 cactactaga tttcattagc gccttatcca aagaaaacct caaataaaat tggtgtacaa
    35821 tttttgaaaa aatacttttc aaaaattaca cgaaaaaagc acccgtaggg aaaaccctgc
    35881 gagcgctttg aaacgttgat atatcgcggt atattaacgt ttactgaatt gtgatgcttt
    35941 acgtgctttc ttaagacctg gtttcttacg ttcaaccata cgagcgtcac gtgtaagaag
    36001 gcctgcgcgt ttcaatgaat cgcggaagtc tgggtctact tgaagcaatg cacgcgcgat
    36061 accatgacgg atcgcacctg attgaccacc gtaaccacca ccgttcacgt taacaaaaac
    36121 gtcgtatgaa ccttgagttg aagttactgc gaatggttgg ttgataacca aacgaaggtc
    36181 agcgtgtggg atgtactctt ctacatcttt tttgtttact gtgattttac cagtacctgg
    36241 gaccaaacgt acgcgtgcaa ccgcgttttt acgacgacca gtacctgtgt attgtgcttg
    36301 tgccatttag attacgtcct ttcccttaga taagacctga aatatcaagt acttctggtt
    36361 gttgtgcagc gtgagtgtgc tcagcaccta caaacacttt caatttcatg ccttgtgcac
    36421 gaccaagtgt gttgtgtgga agcataccct taactgattt ttcaatcaaa cgaacagcgt
    36481 ttttagaacg caattcacca gctgagattg atttcaatcc gcctgggtgg tttgagtgag
    36541 tgtagtaaat cttatcagtt gcttttttac cagtcaattt cactttctca gcgttgataa
    36601 cgataacgaa gtcgccagta tcagtgtgag gtgtgaaagt tggtttgttt tttccgcgaa
    36661 gtacgctagc aactactgca gaaagacgtc caagaggcac atcagtagcg tctactacat
    36721 accatttacg ttcaacttgg cctggtttag ccataaatgt tgttttgttc atgatttctc
    36781 ctatacgaat cgtttttgtt tactgggcgg atgttccggt ccgcgggtat ttggaaggtt
    36841 ccggggcctt tcaaatgggg taaacaatac cgtataccat tctatcaaaa ctactgttct
    36901 ccgtcaagct attttacttt acttttttta ttttttctcc aggctaaagc aaggatagaa
    36961 aaagcgaaca gttacagcag aaaaatgaca ccaaatccct atcttcttac cgattgcccc
    37021 attttgaaat aggtatgccg cttgcctcta accgccaagg acagagccaa gatattttca
    37081 gggtcaggca tacgaccgta gcccccgtct ccgatatggt ggatgtccga gcccacccgc
    37141 ttgttgctga gcccaaactc ccgcaccgtc tgactgtccg cactctcctg actagtcccg
    37201 atagtcgaaa taaccaaagc cccacgcgcc ttgacctgac tgacgatcgg tgccacgatt
    37261 tcctcccgca cacccggcac cgtgccgacc gcaggaatga ggacaccgtc tgcccccaag
    37321 tccacaaaat ctagcagggc ttgactatcc acgaccgact ctcccagacc tgcaccgtgc
    37381 attttccccg caaagatgag gccctcaaag tattctttgg caaggccaat agcagagcgg
    37441 attgcagcca tggacacacc cgtagcagga ttgcctgtca gcatgataaa atctacgcca
    37501 agggcttggg cctgtcgcag actttctgga ctgacttgac gacccggttt taaaaagacc
    37561 tgctggtctt gaacttcctg actagtatcc acaggctcca agtttatccc aaccaatcga
    37621 cctgtcaacc gcttgatttc agcgatagga ttgtcgcagt cgtaaaagtc aacaatctcc
    37681 ggatgaaaca catctaattc attgagcacc aagaggtcac aaccaaaggc agccatcatc
    37741 tccgcattgg tcacccccgc aatcaaggga gccgctgtga ccactgtttc tcccatgata
    37801 atccgacctt cactggacaa aatggactgc ttgagctcct ccttggtcgc tcctaccata
    37861 tcactggcat agcatgacaa taaacgtttc ataagaacct ccaaatggat atgctttgtt
    37921 atttgtaacc gttttctttt ttgtgtggat aaagaaaaga gattatctct ctttcttatt
    37981 gatggatagg atagctagta cccctgttcc tgtatgagtg gcaatgatcg gacccaactc
    38041 aatcaaaaga acatcgctga cacggctatc ttccaacaat gtctccttga cagcttcagc
    38101 cgtctcaata tcacccgtat aagcaaccat gactgtagaa tgatccaagt tatccaaggt
    38161 caggttcagc atttccttga ttcctttttt acgaccacgg attttggcaa tggcttctaa
    38221 cttcccttcc gcattgagtg caaggagagg tttgatattg accaatccac cgatgagggc
    38281 tgccgcttta gacaggcgtc cacctcgcac caggtggtta aggtcatcga ccaagagata
    38341 ggtccgtaag cgcggcacca aatcttctac gattgcctta gtttctgcca aagttttacc
    38401 cgcagcacgt gcttgagctg cctgcataac caagtagcct tccccgatag aagccgcctt
    38461 tgtatcgaca atctcgatat gggcttgtgg gtagttgtcc aagaccatgt cacgtgcaat
    38521 agtaccactc tgataagtcc cggaaagagc tgatgagaaa gccaagtaaa gcacatcttg
    38581 accttccttg gcaactgctt caaagacttc ctcaaactga ccaacattga tctgactggt
    38641 tgtcggcagg ccacctgtcg ccattttctc caacaaatca gcagaagtca agcggttttc
    38701 tccaacggtt tcataggtca caccgtctaa gttaatggtc aaaccaagta cggtcacatc
    38761 gttttcttgg acccagctga ttggcaaatc cgatgtcgaa tcggttacga ttttaaatgt
    38821 cactctttca tttcctccat catttctttt aaggcttgaa aattcccatc tgaccaggga
    38881 ttgaggcgcg gggtgtaaag ctctacctgg tccacaaact tgtccaaatc ctttttgatg
    38941 accctggttc tctcctctaa ctcacgcgcc gaaacccgta aggccccttg tgaaaagacc
    39001 acccattgtt cgttgaggtc gctggttgcg acggaaacct gcttgcgacg ggcactattg
    39061 agctgggcac tgagtcgttc gatatagcta tctgccgtct cttcctcctc tgtaaaaatg
    39121 accgatacct tgaattcgtc atactgctgg cgaagacctg gcacatggtg ggcatcaaag
    39181 acacaaatca cctcaatctg ttcaaaggct gcgtagtgag acagggttcg aagcaaggtc
    39241 gttctggccg catccaagtc tcccttttta aaatcttgct tagtggcctg ccaaaaggca
    39301 atcatgttgt agccatctac aatgagaact ttttctttca tttagatttt cttccgaaat
    39361 acttcataca tcagcacagc tgcagctacg ctggcgttga gagattggac atggcccttc
    39421 ataggaatgg taatcatctc atccacctgc tttttgatat tgctggaaat ccccttgcct
    39481 tcattgccaa taataagagc tagtttgcca gccgtattcc acttgtggct tggagttccg
    39541 ttcatatcgg taccaaatac ccagaaacca gcctccttga gtttgtcgag ggtttggctg
    39601 agattggtca ctcgggcgat tgggacatgg gccaccgcac ctgtggaggt cttagccaca
    39661 actggggtca ccccaactgc tcggtgcttg ggaatgatga tgccagctac ctgagtggca
    39721 tctgcggtcc gcaaaatcga gccgaagttg tgggggtctg tcagaccgtc caagatgaga
    39781 atgaggggat tatcttcctg ctctgccttt tccaaaatca ccgacaggtc cgcataggcg
    39841 aactcagaga cccgcaggac aaagccttgg tgaaccgcac cttctgtcat gtcagacagg
    39901 gtcttcttgg gcgtccaaga aatcgacacc ttcttctctg ccgccagggc cttgattttt
    39961 tctacatttt ttccgcgcaa atcatcctgg atgtagagct tgttgccggt gttggcctcc
    40021 aaactctcta ccacagcatg cacgccatat acgatatcat tatgttccat ggttttatta
    40081 tagcatattt ttgaaaagga aaaagccgag aatttctcag ctttcttagt tcacactgtt
    40141 ttccagataa taatgttgag caacatacca gttgacaccc ccttgttccg ggtctgtatc
    40201 atactcacta gcttccaact ccccacgact attgatccga taactccaat ctcgtggttc
    40261 aaaattaggg tctgatggta cagttacatc tgcataaact aaaccatcct cagccatatg
    40321 aacacttatg acaacctggt cttttcgata cttttcaatc atgacgctac gcctaaataa
    40381 atcatccatg acccaagctt ttacctgatc tgtcgttaag tttttggtat caacctgcgg
    40441 tacaggatta tgcaaatctg tcaacgaaat ccaaccctgt cctgacttta atctgcccca
    40501 actatgtcct tccttttgag tcgtctcaac tatcgtgtac gttccaggtt ctatattggt
    40561 cacaacttct ccagataaac taggttcctg acgaataacc agtccttgtt ttttaatatc
    40621 cacagtaaac gattgaacgg cgctacctac ctgagactgg ctagaagctt gcgaacttcc
    40681 agcagtctta ctagtggcta cctcactagt tgaactatcc tcaactacgg tagtatcctt
    40741 tgcatctaca tttttagcaa taattaagtt aaccgcactt ccccgcttta ccttcttccc
    40801 actacttgga gaagatacac taaccatccc aggctgaact gactgtccac caacttctgt
    40861 tattgtacca actttcaacc cctcttcata cagtaaatcc ttagcttcag atagctcaat
    40921 accatatagt tcaggaactg taacttgaga actatcttgg tatacaaaat ataagccagc
    40981 cattcctaac acagccacaa tacttgaaat gattagccct atctttcgtc tttttgcgtc
    41041 tgccaaacgt ttctcagctt gctctctttg ataattctca taatcttcct cagcttcgct
    41101 aagcatttgc tggatgacaa atcgttgact ctcatccgta acctgtgcta agtgcaatcg
    41161 taattgaaaa actctatcct taaactcttt ttcaatttga cgctcatgct ctttttgcaa
    41221 aatgttattt tgtttttgaa gtgctattgc ttgagagttc atagcagagg tttgagcatc
    41281 cattttttgc ttcaattcat catgtctctg ccgctcttca aaatctcgca tccattgatc
    41341 cataataatc atctcctcat aaaatgttgg ttattatcta taaatgaagt ctattttatt
    41401 ttagtatagc ataacacctt aatttgtcaa tcatcatttt caccccgttt caatctaact
    41461 tttgacaaat agtaaagcct atgatattct aatgtctact atttgtccgt acaaacggac
    41521 caaaaggaga ttttatgaca cttgtatttg gaattgtggc aggtctgatt gcctttgcta
    41581 ttggtggatt gtggtatggt ttgattttcc gcgatgcttg gatcaaggct tcaggcattg
    41641 acatggctaa ggtagaagca gaccgtcagg ctggaaaaaa tggtcagaag gaaatggtga
    41701 tttcccttgt cattgaagta ctgactgctg ttgtggctat tttcttcatc aaaacccttg
    41761 atgtttcacc actccacgca gctggtggca tgggcgtgat tgcggtcctt gcttcattga
    41821 aaaactacat ctttgagcaa cgccctatca acctcatcct catcaacgaa agttacaagc
    41881 tggtctgcta tttggtagtc ggtattattg ctttgtttgc ataaattcaa ccctcctaac
    41941 cttaggaggg ttttatggta caataaaaag aagactaaga ccaaaggagc caccatgtcc
    42001 ctctcccacc gaacgattaa actgattttt gccaccgtgc tggctattta cctagcgacc
    42061 gccctgggct tgtcttatgc gacagctgcc ggcatcatcg ccattctcag cgtcctcgat
    42121 acccgcaagt ccagcttcaa aatggcccgc aaccgcctct tctctaccct cctggccctg
    42181 accatagccg tcctgacctt cgccctcttt ggctttggca tctggaccct gggcatctac
    42241 ctagcactct acgtccccct ggcctaccgt ttcaactggg aggctggcat cgccccatcg
    42301 accgtcctcg tcacccatct cttgctggag caggatattt cgctgatttt tttgggaaat
    42361 gagctggcgc tttttctgat tggggcagga ctggcacttt tgtttaacct ctatatgccc
    42421 tcacaagaaa agaaaatcca ggcctatcac gaccaagtcg aagacctgct caagcagatt
    42481 ctcctccgct ttgaagcctt tctgcttaac ggcgacggac gaaacgaggc agaattgatt
    42541 acgcagctgg ataagacctt ggatgaggcc ctgaaagtcg tctacctaga ccgccacaac
    42601 cagctcttcc agcagaccaa ctaccaggtc cattactttg aaatgcgggc cgcacaaaac
    42661 aaaatcctgc gaaccatggc aggaaatatc aacaagtgtt tactggaagg cagagaaaat
    42721 gtcatcctgt ccagcctctt cgaacgaaca gcccagcaac taagccgaga aaattctgcc
    42781 aaggaactgc ttctggacat cgaactcttc catgccacct tccgcgagcg acctctgccg
    42841 caaaccagag aagaatttga aactcgggcc accctcttcc aactcctaca cgacatggaa
    42901 gcctttattc gcctcaaggt tgatttttat gaagtttata aagaccaaga accgtcagtt
    42961 taagccgacg gttcttctac ttttccatga aattcatctg atatagtctt ttagtttact
    43021 tttagtacta ggcaacgagc cgcaggcata actggagtta ggcaaggtga gttaacgacg
    43081 taataaaaga taaactaaat gacgatactt ggttgtgcaa atgcaagaaa gacagaccca
    43141 tcatgaccgc attccctgcg actgcaatca taaattcttc cttagaagat acctttccta
    43201 gccaaatgga gaggattaaa atgagattgt aaagaaggat agaaagagct gccaaacgaa
    43261 tttttttcag tagtgtcttc ataggaacct cctgtaagtg ttgggagtgg gacagaactc
    43321 gaccatccat agaagagttc gttttcccac ccccgcacag ttgattaggt cagatttgga
    43381 gtgtaaaaca cgaacaaatc tgccaatcaa ccactgcgct gagatgttga cacgaactct
    43441 gagaagtgga actgggcttt ttgcccagcc tctttaataa aaataacaag tatttatgcg
    43501 ttcttaaccc caaaaaaccg ccagattttc atctagcggt caggtgtttt atgaacgatt
    43561 ttagaaaggt tagacaatcg ccttgcttgt ttcatcatca aagaaatgag ctttgttgag
    43621 gttgaaggtc aagcgaactt tgtctcctgg gttgtggtag tcgcgtgcat caacgcgaga
    43681 tacaaactct gtgctaccta ctttagagta gagcatggtt tctgcaccga gaagctccga
    43741 tacaaccact tctgcttcta cgatggaaga tggataagtg tccaattcca actgagaagc
    43801 cttgatgtct tctggacgga taccgagggt aaatgatttg ccattatagc ctttttcttc
    43861 caagtgtttg cgacgtcctt ctggaagctc caccttgaaa ccatctccaa caagaacgcc
    43921 atcttgaagc gtaactgtga agaagttcat agctgggcta ccgatgaagc tagcaacaaa
    43981 cttgttaaca gggcggttgt agagctcttc tgggctaccg atttgctcga tacgaccgat
    44041 tgtacctgtg cctgctgggt ttttagttgc agacatgata acgatacggt ctgccaaggt
    44101 catagcttct gtttggtcgt gggttacata gatggttgtc gcaccgatac ggcggtggat
    44161 tttagcaatc tctgtacgca tggatacacg cagttttgca tccaagtttg acaaaggttc
    44221 atccatcaag aatacttttg catcacgaac gatggcacga cccatggcaa cacgttggcg
    44281 ttgtccacct gaaaggtcag ctggtttacg ttctaagaat tctgtcaaac caagaatttg
    44341 agcagcttct tctacacgtt ttttgatttc gtccttgctg tatttacgca atttcaaacc
    44401 aaaggccatg ttgtcaaata cagtcatgtg tgggtagagg gcatagttct ggaataccat
    44461 ggcaatgtcg cggtcttttg gagccacatc attcatgaga acgccgtcga tgtatgcttc
    44521 cccttctgtg atatcttcca aaccagcaat catacgaaga gttgttgatt taccacatcc
    44581 tgaaggacct acaaatacga taaactcctt gtccttgatg tccaagttaa agtcttcaac
    44641 agagtagtgc tcgctgtttg gatatttttt atagatattt tttaaattca attgaaccat
    44701 gttcaatcct cgctttcttt gatagtttta ttgtaaatga aaacgcttta tttttctagg
    44761 tcaaggtgaa caaaaagaac acaatctttt gtacaagttg cacaaaagac tgtgttactg
    44821 aaatagttta ctttccaaaa attcaatgag ccctttggga ttttcagtag aaaagggacg
    44881 aagcgatggg tggcattctc aaaggctaca acgcttttct catcattagc tcctattaga
    44941 tacttaaatc catgataacc atgtagcaaa ctgccaaatc cgtcaattcc ttgagctgta
    45001 atcccgtcca atcaaaccat ttgtccaagc gatactgtag cgtatttcga tggatataga
    45061 gagactgggc tgccttggtt atgaccgcac cttcttgcca aagagctaca atttcctttt
    45121 ctagctgctg gtgggcaatc aaactagcaa gtccttctct caaaacgggg tggagttgac
    45181 ctgcccaaag atagagctga ccgaaggtaa gcaaccgtga ttgatggtgg ctgcttcgcc
    45241 aatggtgaaa aagggattgt tcagcttcga ttaattgcgg ccaagagtgt accaatttgg
    45301 ctggccagat ttgccctaaa aacaatgtga ttctcagacc aaaatcgaac tccatggtag
    45361 caagggtgtc acgcagtatt tctttgacat caaaaagagg tgcctgatgt agaatgaaca
    45421 ggtaatcctg tccattgcct gtatagtagc cttggagatt ggggaggagt ttggccatca
    45481 tatcaagcca ggctaccttt ccatcttcat cggatacgtg gcctacatga gcatgaataa
    45541 cctgtagttt ttccaaggtt tgtggaagag gacctccccc ttggaaatag cgtccccaag
    45601 gatgaccttg ttctgcgctc gagtcattca tcagcaagtc aatcagttcg atttctcgat
    45661 ctgtcaaatc cttgcgatcg acggaaaacc aggtttgatc agccagaggc aactggatac
    45721 ttgctccgtt ttctgtcttt tcaaatacaa gccttccttt tggaaatagg tgctgcaatt
    45781 cttccctttt gctcatctcg cctccatctc attctgtctg taattgaccg attttctgtc
    45841 gataattttt gggagattcc ccacaaatgc gtttaaaaat cttatagaag taaccgacat
    45901 ttgtatatcc aacttggaaa caaatttctt cgattcccaa ctgactgttc aagagaagct
    45961 gttgtgctac cttgattcgc tggtgattga gcagttctgc aaaagtatgc ccggtctctt
    46021 ttttgataag ttgacctagg taaaccgtat ttaggtagag atgagcactc atatctttca
    46081 aagacagttc ctctgcaaag cgttcacgaa caatcgtaac gacttcctgt acatgtggac
    46141 tgtaagtgga actctcggaa aattttttca gataatgact aaaataatcc aatagttgat
    46201 gtaaatctcg actcgcttct acctttacat agaaatcttc caagcgctga tggtcttctt
    46261 cattaaaata gtaaaacaca tccgacatca tctgattaaa aaattgtttt gttaggtaga
    46321 ctgccggagt ggcttctcgt aatttatcag ccaaatgtgg taaaacatca acgatttttg
    46381 ccaatcttcc tgcacgtaga agcggttcca tatctttata gagctctgtg gtagtagccg
    46441 ttagatcttc tgatagttgc ttataaaata agcgcctctc taccttgtca atcaactgcc
    46501 gtatggtcat cgtcggggta acttcttctg tatatagact accctctggt cgactttctg
    46561 tcaactgaaa atagtagact tggtgtaaaa tatttttttc acgacagtag cccattgggt
    46621 ttggagtctc tctagcggca aaccatgttt tctgggagtg acgtaataac tcactcgctg
    46681 tcagggttcc tgccaagaag cccttggtat attccctatc tgtctctttc ttcaaggttg
    46741 gtagctgttg gagcagctta gccagttctt gtttattgat gggcttaagg agataatcca
    46801 ttgcccctag agagatagct ttacgggcat attcgaattc ttgaaaacca gacatgatga
    46861 taatgtgagt atcaggcgat tgttctttca ttcgccgaac catttctagg cctgtcatat
    46921 ctggcatgct gacatcggtt aggacaaggt ccacagtatg ctgtgaaaaa taatccagcg
    46981 cttcttcggc attctctgcc gtataaacaa tctcgacatt gtattcatga taagggagaa
    47041 gatgcttcat cccttccaaa atcatatatt cgtcatcaac tactaacatc ttatgcatca
    47101 tgctcatctc ctcgggggaa gacaccttca aataagattg aatatgtcac cccttcccct
    47161 tctttagaat ctaattctat ctggtaacgg tctccaaaat agagaagtaa ccgctcatga
    47221 acgtttcgta atccgattga ttgtgaccga ttttcttgcg acagttctcg acttgccaag
    47281 aggtgtttgt aggcttccag agtttctgcg ttcattccct taccattatc tctgatgaga
    47341 atttccatat cctgtccatg cttgagagct ttgacactaa gcgcattgtc ttttcgtttg
    47401 aggtctactc catgga
//
LOCUS       DASFQD010000004        35549 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.004, whole genome shotgun sequence.
ACCESSION   DASFQD010000004 DASFQD010000000
VERSION     DASFQD010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 35549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35549
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.004"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(94..765)
                     /locus_tag="U1021_000143"
     CDS             complement(94..765)
                     /locus_tag="U1021_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM4710742.1"
                     /translation="MDINWQAVFNADIAREAIPQILEGLPYTLSLSLIGFALGTFCGF
                     FVALMRMSKFGPLRWLAMAHISLMRGIPLMVLLFFIYFGLPFMGLQLDAISASIIAFT
                     SMSSAYISEIIRASLSAIDKGQWEAARSLGLRTNVIYRKIIIPQAFRIALPPLSNVLL
                     DMVKSTSLTAMITVPEIFNKAKIVGGAKSDYMTVYICVALIYWVICTLYAFGQLKLEK
                     RLATY"
     gene            complement(856..1734)
                     /locus_tag="U1021_000144"
     CDS             complement(856..1734)
                     /locus_tag="U1021_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000751024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEM4710743.1"
                     /translation="MLKKLLTSALLVSSITLAACSNTSTSTESSSSASQTQWEKVQEA
                     GVLKVATPGTLFPTSYYNDAKELVGYEIDMINEIGKRLKLEIEYQEIGVAEAFTAVDS
                     GKVDISVNNFDMTEARKEKYNFSIPYKYSVGGYIVREDGSSGIEAADLSDWTGKKAGG
                     GAGTQYMKLAEKQGAEPVIYDNVTNDVYLRDVSTGRTDFIPNDYFTQVMAIKWAKANF
                     PDIKVKMGAAQYNPTEQGIVMSKADKSLKEKIDEALEAMKADGTLKAISEKYYAGQDL
                     SVPVENADKLPVIEVE"
     gene            complement(1862..3310)
                     /locus_tag="U1021_000145"
     CDS             complement(1862..3310)
                     /locus_tag="U1021_000145"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEM4710744.1"
                     /translation="MTWKDATAMAQAVNQKQVSAKELVQETIDRIEKLNPTLNAVISK
                     QYEEALKEAEKEDYLDKPFAGVPFLLKDLGQNEKGQPSSAGSRLLAGRPAGHTDTYVQ
                     RLKDLGFIIVGRTNTPEFGFKNISDASLHGPVNLPLDPSRNAGGSSGGAAAALASGMV
                     SIAAASDGGGSIRIPASFNGLIGLKTSRGRIPVGPKSYRGWQGASVNFALTKSVRDTQ
                     RLLYHFQDYQLEAPFPLAKLSEEEVFGKLSRPLKIAYYIKSPVGSKVSPEAVEAVQKA
                     CHHLANLGHEVVDLSEYPLDGVALMKSFYLMNSVDTAQMFDEIEAVFGRQMTLDDMEV
                     MSWAIYQSGQTIPAKLHSKALLDWDQFGASMARFHEEYDLLLTPTVADVAPKHGQFDL
                     SADLLDRLKHTQNYSMEEQQDLIWQMFEDSLALTPFTQQANICGQPAISLPTYMRADG
                     LPIGIQLTAAKGREDLLLQLADQLQAAGLLHL"
     gene            complement(3320..4147)
                     /locus_tag="U1021_000146"
     CDS             complement(3320..4147)
                     /locus_tag="U1021_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase family protein"
                     /protein_id="HEM4710745.1"
                     /translation="MKSWVENVTIKKYEDRSGLTGLKQGALVWTEVFLREVNRQSNTG
                     ILHFWPMDQTVILGMMDSQVAQLDKGLASIGQAGYSPIIRSLGGLAVVADEGILNVTL
                     ILPNPSGHKLDLRESYQVMVDLIAQALSDFPFEVVSGEVATSYCPGTYDLSIKGRKFA
                     GLAQRIYQEAIAISAYISVSGNQVKRGQVVADFYAASFAPQAVSDRFPQVNPDSMANL
                     SDLVGQALTVEDMKTRIERVLIENGSFLTTFYPSSDNMADFMAFGQTIKQSMEKYGI"
     gene            complement(4274..5410)
                     /gene="dnaJ"
                     /locus_tag="U1021_000147"
     CDS             complement(4274..5410)
                     /gene="dnaJ"
                     /locus_tag="U1021_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002905343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEM4710746.1"
                     /translation="MNNTEFYNRLGVSKDASQDEIKKAYRKLSKKYHPDINKDPGAED
                     KYKEVQEAYETLSDPQKRSAYDQYGPAGANGGFGGGAGGFGGFDGAGFGGFEDIFSSF
                     FGGGGATRNPNAPRQGDDLQYAVNLKFEEAIFGVEREVSYNREATCRTCTGSGAKPGT
                     SPVTCGRCHGSGVINVDTQTPLGTMRRQMTCDVCHGRGKQIKDPCTTCHGTGHEKQAH
                     TVTVKVPAGVETGQRIRLAGQGEAGFNGGPYGDLYVVIQVQPSDKFEREGTTIHYKLN
                     LNFVQAALGDTVHVPTVHGDVDMVIPEGTQTGKTFRLKGKGAPSVRGGAIGDQYVTVN
                     IVTPTGLNDRQKAALKEFAAAGNIDVKPHKKGFFDKVKDAFEDL"
     gene            complement(6235..8058)
                     /gene="dnaK"
                     /locus_tag="U1021_000148"
     CDS             complement(6235..8058)
                     /gene="dnaK"
                     /locus_tag="U1021_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002946936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEM4710747.1"
                     /translation="MSKIIGIDLGTTNSAVAVLEGTESKIIANPEGNRTTPSVVSFKN
                     GEIIVGDAAKRQAVTNPDTIISIKSKMGTSEKVSANGKEYTPQEISAMILQYLKGYAE
                     EYLGEKVTKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDK
                     DEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDHMVAEFKKEN
                     GIDLSADKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAGAAGPLHLEMTLTRAKFD
                     ELTYDLVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKS
                     VNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSK
                     SQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDK
                     NGIVSVKAKDLGTQKEQTIVIQSNSGLTDEEIDRMMKDAEANAEADKKRKEEVDLRNN
                     VDQAIFATEKTLKETEGKGFDAERDQAQAALDELKAAQEANNLDDMKAKLENLNEKAQ
                     ALAVKLYEQAAAAQQAAAGQEGAQTANNAGDDVVDGEFIEK"
     gene            complement(8147..8659)
                     /gene="grpE"
                     /locus_tag="U1021_000149"
     CDS             complement(8147..8659)
                     /gene="grpE"
                     /locus_tag="U1021_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEM4710748.1"
                     /translation="MSEEIKNEEIVEEVEATEEVVETPEKSELDLANERAEEFENKYL
                     RAHAEMQNIQRRANEERQTIQRYRSQDLAKKILPSLDNLERALQVEGLTEDVKKGLEM
                     VQESLIQALKEEGVEEVATDVFDPNLHMAIQTVPATDDCPAEHIAQVFQKGYKLHERL
                     LRPAMVVVSE"
     gene            complement(8796..9830)
                     /gene="hrcA"
                     /locus_tag="U1021_000150"
     CDS             complement(8796..9830)
                     /gene="hrcA"
                     /locus_tag="U1021_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HEM4710749.1"
                     /translation="MITQRQNDILNLIVELFTRHHEPVGSKALQEMIASSSATIRNDM
                     AKLEQLGLLEKAHTSSGRMPSRAGFQYFVNHSLNLEHIDEEDVYQVVKAFDFEAFKLE
                     DILERASTVLADLTGYTSVILDVEPTSQQLTSFDIVQLSSHDALAVLTLDQSKPVTVQ
                     FAIPKNFLTRDLEVLKRLVDERFVDQTVLSIHYKLRTEIPQVVQRYFATTDNVLDLMD
                     YIFSNLFQESVFISGKVASLTYGNLATYQLLDSAQLLAPELRQGLAPDQQTSISVAEH
                     SDSALADVTVIHHRFPIPYRGMGQMSLLGPVDMNYRRQMSLINIISRVLFMKLTDYYR
                     YLSSNHYEVN"
     gene            complement(10052..10747)
                     /locus_tag="U1021_000151"
     CDS             complement(10052..10747)
                     /locus_tag="U1021_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM4710750.1"
                     /translation="MADVRLYISRHGKTMFNTIGRVQGWCDTPLTKAGEEGIRELGLG
                     LKDAGLEFKLAVSSDLGRTVQTMTIAQRELGILGKIPYYQDKRIREWCFGSFEGMYDA
                     ELFQGVLPRLKGTVDATGMTFAEIAAGIQEADTAGWAESWEVLSNRILTGFEAIAQDL
                     KKQGGGNALVVSHGMTIATLAHLLEPERGANIFLDNGSITVLKYENGKLLIEAVGDLS
                     YRKRGAELIAQGK"
     gene            complement(10823..12160)
                     /locus_tag="U1021_000152"
     CDS             complement(10823..12160)
                     /locus_tag="U1021_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018166727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HEM4710751.1"
                     /translation="MDIRQVRETIEMIEEQNFDIRTITMGISLLDCIDSDIDKAAEKV
                     YTKIVTKAKNLVAVGDEIAAELGIPIVNKRVSVTPIALIGAATDATDYLPLAHALDKA
                     AHEIGIDFIGGFSALAQKGYQKGDEILINSIPQALAQTSKVCSSVNIGSTKTGINMTA
                     VRDMGRIIKETAEASDMGAAKLVVFANAVEDNPFMAGAFHGVGEADVVINVGVSGPGV
                     VKRALEKVRGESFDVVAETVKKTAFKITRIGQLVGNMASERLGVKFGIVDLSLAPTPA
                     VGDSVVRVLEEMGLETVGTHGTTAALALLNDAVKKGGVMACNQVGGLSGAFIPVSEDE
                     GMIAAVQNGSLNLEKLEAMTAICSVGLDMIAIPETTPAETIAAMIADEAAIGVINQKT
                     TAVRIIPLGKEGDMIEFGGLLGTAPVMKVNQASSVDFINRGGQIPAPIHSFKN"
     gene            complement(12172..12438)
                     /locus_tag="U1021_000153"
     CDS             complement(12172..12438)
                     /locus_tag="U1021_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002905356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEM4710752.1"
                     /translation="MKAIVTVVGKDKSGIVAGVATKIAELGLNIDDISQTVLDEYFTM
                     MAVVSSDEKKDFTKLRAELEAYGQALNVKINIQSAAIFDAMHNL"
     gene            12695..14437
                     /locus_tag="U1021_000154"
     CDS             12695..14437
                     /locus_tag="U1021_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM4710753.1"
                     /translation="MKIIKQLWWFFSLEKKAYLIGILSLCLVSLLNLLPASIMGQLID
                     QIASGQLTEHRLLLGVAGLILSALAMYGLRYLWRMNILATSYRLGKIMRARLFDHFMH
                     LSPSFFQQHRTGDLMAHATNDINALTRLAGGGVMSFVDATVTALVTLITMSMSISWQM
                     TLVAILPLPFMTLTTNFLGRRTHENFKASQAAFSELNNKVQEAVSGIKVTKSFGYQEQ
                     ETVAFQEVNQAAFLQNIKTMRYDALFNPAVLFFIGLSYLLTLLVGSHFISQGQVSLGQ
                     LVTFMTYLDLLVWPLMAIGFLVNISQRGDVSYNRIQTLLNISSEVVETDQPLPAPSNG
                     EIVYEISEFAYDNIPVLQDIQFHIKKGQTIGLVGPTGSGKTSLLKLLMREYDVTNGRI
                     LLNQENIKNYKLADLRRLIGYVPQDQFLFATSVTENIRFGNPDLSLDQVEEAARAVYV
                     YEDIQDMPDRFDTMVGEKGISLSGGQKQRLAMARAMILNPDILLLDDSLSAVDAKTEH
                     AILETIKQERLDKTTIITAHRLSAIVHADLILVLEDGKIVERGRHQELLDEKGWYYDT
                     YMMQQLEKEETDAL"
     gene            14427..16175
                     /locus_tag="U1021_000155"
     CDS             14427..16175
                     /locus_tag="U1021_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4710754.1"
                     /translation="MPSKTKQASVFWRLLSYLKAYRLLTVLALSFLLLTTVVRSLIPL
                     LASYFIDHYISSISETAVAILAAYFTLYLLQMVLQYFGNLWFAKVSYSIVRDIRRDAF
                     GRMEKLGMAYFDQTPSGSIVSRITNDTESISEMFSGILSSFISALFIIITTLSTMFAL
                     DWKLTCLIVLFLPLIFLLVDQYRKRSAPIVAKTRSLLSAINSKLAESIEGIRIIQAFS
                     QEERLKEEFEAINQEHLDYASRSMALDSLFLRPALSLVKILAYALLMTYFGLDWSQAG
                     ISAGLIYAFIQYVNRLFDPLLDVTQHFSTLQTSMVSAGRVFTLMDQTIEEPLQLDRGT
                     KIDKGHIVFEDVCFSYDGKRQILDKVSFEVRQGQTIAFVGATGSGKSSIINVFMRFYE
                     FQSGRILIDGQDIRSFSQEELRSAIGLVLQDPFLFHGTIASNIQMYQDISQEEIEEAA
                     RFVDAAPFIEKLPEKYDHLVTERGTTFSTGQRQLLAFARTMASQPKILILDEATANVD
                     SETEQTVQTSLEKMRKGWTTIAIAHRLSTIQDADCIYVLDKGKIIEFGNHEELLAFKG
                     HYHRMYQLQAGQLAAT"
     gene            complement(16270..17367)
                     /locus_tag="U1021_000156"
     CDS             complement(16270..17367)
                     /locus_tag="U1021_000156"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HEM4710755.1"
                     /translation="MFYLGEFGLDRKDQHVGLANQQYSATPAKDFTETLFVHHSLPQT
                     KVDEVDISTSVAGLDFAFPFFVNAMTGGSKKTREINRLLGIMGHFGKIALASGSVSAA
                     IKDPSVAETFSVMRRENPYGIIFANLGAHHSVENAKRAVDLLEANAIQIHVNAPQEIV
                     MPEGDRDFTMWLKNIETLVREMEVPVIVKEVGFGMSRETVAQLASVGVKTIDVSGTGG
                     TDFAKIENARRTFNDYTYLEGWGQSTVTSLVEAMSVSEEVRPSLIASGGIKTPLDIVK
                     SLALGADLVGMSNHFLQYVKDGKGHRFDDGLQAIKTYQWQMAEIMTMLGAKNIADLRK
                     KDLVLAPNVQNWCEARGIDWKAYARRSANVS"
     gene            complement(17378..18457)
                     /locus_tag="U1021_000157"
     CDS             complement(17378..18457)
                     /locus_tag="U1021_000157"
                     /EC_number="2.7.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomevalonate kinase"
                     /protein_id="HEM4710756.1"
                     /translation="MKVQVKIPGKLFLAGEYAVVEAGYPAVIAAVDQYLTVTIETSDQ
                     GSLHSSQKADLYLIWERKGNEIFIQDDHPYALIETAMQLTEEYLTAKGYACHGTYSLA
                     VQSDLDDQTSGAKYGLGSSGAVTVATVKALLTYYGHRPDALLTYKLAALAQTKLGMTG
                     SFGDLASSSFGGLIAYHSLDRSWLLGKMAELSLLDLVESDWQGLSISPIQLPQGLDLL
                     VGWTGSAASTDSLVSQMESQKSQAEKEQIHSRFLADSKTCVEQLIVACQTNDLVSARQ
                     AITQNRKLLQDFARGMGLVIETPQLSQLCDLAQTYGAVAKSSGAGGGDCGICLVDSKE
                     QKVAIEKAWQQAGILPLQLKITSRE"
     gene            complement(18459..19484)
                     /gene="mvaD"
                     /locus_tag="U1021_000158"
     CDS             complement(18459..19484)
                     /gene="mvaD"
                     /locus_tag="U1021_000158"
                     /EC_number="4.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diphosphomevalonate decarboxylase"
                     /protein_id="HEM4710757.1"
                     /translation="MTKQIGIARAHTNIALIKYWGKRDKELFLPMNSSLSLTLDAFYT
                     DTKVVFDPELTADEFYLNGMLQKEKEILKISRFLDLFCEYIGERAFARVESLNFVPTA
                     AGLASSASAFAALALATATALDLDLSPATLSTLARRGSGSSTRSLFGGFVEWDMGTGS
                     EDSMAHPIDDADWDIGMVVLAVNTGPKKIASREGMDHTVATSPFYSAWVDTAKQDLVD
                     IKAAIASCDFEKLGQITEHNGMKMHATTLSANPPFTYWSADSLVAQEAVRQVREATGL
                     SAYMTMDAGPNVKVLCRASQMDELVAELAKVFPREKIITSKPGPAAYVLSEDDWQDSQ
                     AAFEKGL"
     gene            complement(19477..20412)
                     /gene="mvk"
                     /locus_tag="U1021_000159"
     CDS             complement(19477..20412)
                     /gene="mvk"
                     /locus_tag="U1021_000159"
                     /EC_number="2.7.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mevalonate kinase"
                     /protein_id="HEM4710758.1"
                     /translation="MSVVGKANGKIILMGEHAVVYGQPAIAMPFSAVEIIAQVTAQGE
                     ALTVACDFYKGLVHKMPKIWESLKHAIRFSLYRIGAPTDPAIHIEISSTIPAERGMGS
                     SAAVAVAVARALFAYYEKELTDSELWDIVQSSEKIAHGNPSGIDAATTSGKSPVFFIK
                     HQPIEPFELTLHAHLVVADTGVTGNTLEAISDVADLLEKKPEAIKLVEELGNLTRLAK
                     KDLATDQAELLGGRMNQAHTLLQKLGVSAPSLDKLVSFAQENGALGAKLTGGGRGGCM
                     IALARTAQDAQALAQVLAQAGARQTWIQYLGETND"
     gene            complement(20598..21875)
                     /locus_tag="U1021_000160"
     CDS             complement(20598..21875)
                     /locus_tag="U1021_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM4710759.1"
                     /translation="MNKQTYKEILTIAFPAMGENLLQMLMGVVDSYLVASIGIVALSG
                     VSLANNILAVYQAVFIALAAAVSSRLAQDLGEGGSEGIGGTASESVKFTVFIGLLLGI
                     FSVLAGPIVLTSLGAESEVVQAGGLYLILVGGGAPFLGLMTSLSAILRTLGEPRFPMY
                     ISLLSNVLNALFSAFAVFVLHAGVAGVAIGTVLSRLIGCSLLWSRLPISLKPWTWSFD
                     KELLRLALPATGERLMMRVGDVVVVALITSLGTATVAGNAIGETLTQFNYMPALGIAT
                     ATIILTAKHRQDKAMVRHIFRTSFGLSLLFMFLVAGVTYFAGSFLISLYTKDTQAVQA
                     SQTVLFYAMLGVPFTAGTLIMTALWQGLGNARLPFYVTTIGMWLVRIGIAYLLVTFFK
                     IGLSAIWIATILDNAFRAGVLFFQYRYSKQESI"
     gene            complement(21881..23308)
                     /locus_tag="U1021_000161"
     CDS             complement(21881..23308)
                     /locus_tag="U1021_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4710760.1"
                     /translation="MLSRFSDSRPAVTVKNVALTYSGADKPALQIEDLTIPKGQCVVL
                     CGESGSGKSSFLKVLNGLTPEYYPAQLSGQIFLGDLDLQKSSLEEISRHIASVFQHPS
                     TQFFHSQVLQELVFPCENQGLSREEIENRLAWVMELFGLASLSQRTISSLSGGQQQRL
                     ALAVAAMQGTDVLVLDEPTANLDQEGIAIVEDILKTLKSQGKTIIIAEHRLSYLSQLA
                     DRYLYFQDGQVVTDYLADEFLSRTEECRQDMGLRCYDSEPYGRAIADLADQFVNDKEG
                     LLVENLSVSQKENTLYEIEKLCLAPGQVVGLVGANGSGKTSLARYLVGLAEDKKSRIS
                     WQGQILSSRQRLEKTGFVMQDVRLQLFAESVERELTLGRKNRAVDEHLVARFGLSDLL
                     ERHPVSLSGGEQQRVMIVASLLADKEIFIFDEPTSGLDLRRMQQVASALVDLKMKNKL
                     VLLISHDEELLNLVCDKIVDIKKLK"
     gene            complement(23272..23931)
                     /locus_tag="U1021_000162"
     CDS             complement(23272..23931)
                     /locus_tag="U1021_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HEM4710761.1"
                     /translation="MKLDARTKIILVIFTSFTYGMRLTILENAVLVLGLSLLFWFSGK
                     RKMAIMSPIAYSIFCLLSYITFLPAWLTHLLLVLTYTWPPLLAGHLLLMTTSGYELIH
                     GLRKWHLPEVFLLTLGVMFRFLPAIKQDARTICASLKVRGIFLRKRDVVCKPLQYMEF
                     FLVPLMMSLLRTAQELTVASLTKGLAVSTKSPAYIRSSWTVLDWSLCLCCLGFLILVR
                     L"
     gene            complement(23928..24521)
                     /locus_tag="U1021_000163"
     CDS             complement(23928..24521)
                     /locus_tag="U1021_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MptD family putative ECF transporter S
                     component"
                     /protein_id="HEM4710762.1"
                     /translation="MKKLQVKDLMVTGAFAALYFVCVGLGTLLSLVFDRSGNMMYAPA
                     GAALLAGPVYMLLVAKVGKFGSISLVGAVMACFFFLSGYMTAAFLPSLTFGFLAEMVA
                     KSGHYKQKWTNLFSYIIFSFGNLGPIILMWFMRDAYEANLLARGKSAEYIARVMLDFT
                     PESVLWLSTTIILTALISGLFGQYMLQRYFKQSGYLS"
     gene            complement(24522..26183)
                     /locus_tag="U1021_000164"
     CDS             complement(24522..26183)
                     /locus_tag="U1021_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4710763.1"
                     /translation="MDKKEMPTGVLIPRLLQSMKHLLPRIAVAVCFAVLGQVVTIAIP
                     VMLVYLAFVALTGNPAPLWTLGILILLALLRGGFRYGEHYFGHYVAFHTLAAYRRLIF
                     AKLRSLAPGKLDRQDSGSLLKMIGEDIEALEVFFAHTIAPICTGILVALGLTVYFGLS
                     SWGLALLALVTYALLAIAIPNRFAQQLQPLLKEQNASRKGYVSYFIESLKSMKDLMQF
                     QQTDARFAKLTQKSQEVNGQERKVAQTNFMQYAVSFLVVGLSIMGFAWLTFDLVGSQS
                     LGSATGVALLVSFTSSFAPFLELSRLPLGFKRAMNAGRNIYALLDEKEVERTGDLVEV
                     SVKDIAIEQLDFDYDDRETGLYRNLSVQFEQGGIIGLVGESGAGKSTLMKLIMRWYDW
                     QQGQIRLSGLDSRQVDKAHLQGSFAYVPQVPQIFRQTIRENLLLGRTDVSDEVIMDLA
                     EKCHMKERILAASQGLDTLVEASDFSAGEGQRLELMRALLKNADCYIFDEPTSNLDSL
                     NEARFIQLVKEHCQGMVFLISHRSSTMACADTIFRLEDGQLVKEK"
     gene            complement(26176..27936)
                     /locus_tag="U1021_000165"
     CDS             complement(26176..27936)
                     /locus_tag="U1021_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEM4710764.1"
                     /translation="MAQEQEKISREKKKALLKRLKERIKPKMKLVYLAAFLSWVQFLM
                     RIISFYLIAQGFVTYYEGGQVDVVQFVLILVGLNAFGYGVALIAKRLQGLGSQFARDS
                     LKQSFFEALLAKDGQFESKATAADVFNVASQGIDSLDTYYSYYMASSLRTQFNCATVL
                     LLVFLIFPLGAVIFILALPLIPVSIIAMQKRSKRIMNRYWGSYMDVGNLFLDDLKGLN
                     TLYSYQADAAYEKTFNEQAEDFRDATMELLSFQLQAVGYMDAVMYLGIGLSGFVAVNS
                     LAAGNLSLFSMLFFVLIATEFFAPIREQGYGMHLVMMNTKMADRIFGFLDSMTAEQEI
                     DSVHVPAFDSLKLEDLAFAYGEKSVLKDISMTMTAGKVYALAGESGQGKTTLAQLLLG
                     RLRADKGAIYLGEQEILGVSQLSLNEQVLYVSGQSTLLNQSIYENLRMACDWSKEDIL
                     AWVDQHGVLQFVKHLPDGLDTIVGDDGAFLSPGQRQQVICARAVLAKRSLYIFDEVTS
                     SVDQDNEGLIYDLINLVAKDALVIIITHKMKQVEQADDILFLSAEGAVTGNHATLYQT
                     SSAYGQLVDQQRELEEAVYG"
     gene            complement(28065..29549)
                     /locus_tag="U1021_000166"
     CDS             complement(28065..29549)
                     /locus_tag="U1021_000166"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006595200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEM4710765.1"
                     /translation="MTLVYQSTRDAKNTVSASQAILQGLATDGGLFTPISIPAVDLDF
                     SVLKDASYQEVAKLILSAFLDDFTADELDYCINNAYDSKFDTPAIAPVVKLKGQYNLE
                     LFRGSTIAFKDMALSILPYLMTTAAKKHGLENEIVILTATSGDTGKAAMAGFADVPGT
                     QIIVFYPRDGVSKVQELQMTTQTGANTHVVAIDGNFDDAQTNVKHMFNDEALRAKLAA
                     KKLQFSSANSMNIGRLVPQIVYYVYAYAQLVKTGEIAAGDKVNFTVPTGNFGNILAAY
                     YAKQIGLPVGKLICASNDNNVLTDFFSTGVYDKNRTFRVTTSPSMDILVSSNLERLIF
                     HLFCNDAAKTAELMEALNTAGQYDIQGADADILSLFAAAFATEEETAAEIKRVYDESN
                     YIEDPHTAVASAVYKQYVEQTGDQTPTVIASTASPYKFPVVAVEAVTGQSGLSDFEAL
                     AKLHEISGVDLPPAVDGLETASVRHNTVVAAADMQAEVERYLGV"
     gene            complement(29964..32615)
                     /gene="adhE"
                     /locus_tag="U1021_000167"
                     /gene_synonym="adhC"
     CDS             complement(29964..32615)
                     /gene="adhE"
                     /locus_tag="U1021_000167"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000763984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HEM4710766.1"
                     /translation="MADKKVVSPEEKLVEARKHVDELVQKGLVALDEFRKLGQEEVDY
                     IVAKASVAALDKHGELAMHAFEETKRGVFEDKATKNLFACEHVVNNMRHTKTVGVIEE
                     DEVTGLTLIAEPVGVVCGITPTTNPTSTAIFKSLIALKTRNPIVFAFHPSAQESSAHA
                     ARVVYEAAVAAGAPENCIQWITKPSMEATSELMKHDGIATILATGGNAMVRAAYSCGK
                     PALGVGAGNVPAYVEKSANIRQAAHDIVMSKSFDNGMVCASEQAVIIDKEVYDEFVTE
                     FKSYKTYFVNKKEKALLEEYCFGVKANSKNCAEGKLNADIVGRPAAWIAEQAGFSVPE
                     GTNILAAEVAEIGEKEPLTREKLSPVIAVLKVEGRAEGLEAARQMVEFHGLGHSAAIH
                     TEDAELAKEFGTIVRAIRVIWNSPSTFGGIGDVYNAFLPSLTLGCGSYGRNSISDNVS
                     AMNLLNIKKVGRRRNNMQWFKVPSKTYFERDSIQYLQKCRDVERVMIVTDRAMVELGF
                     LDRIIEQLDLRRNKVVYQIFSDVEPDPDITTVYKGTELMRTFKPDTIIALGGGSPMDA
                     AKVMWLFYEQPTVDFHDLVQKFMDIRKRAFKFPELGKKSKFIAIPTTSGTGSEVTPFA
                     VISDKANNRKYPIADYSLTPTVAIVDPALVLTVPAHVTADTGMDVLTHATEAYVSTVA
                     NDFTDGLALQAIKLVFENLESSVKNADFVSREKMHNASTMAGMAFANAFLGISHSMAH
                     KIGGRFHTVHGRTNAILLPYVIRYNGTRPAKTATWPKYNYYKADEKYQDIARLLGLPC
                     STPEEAVAAYAQAVYDLGERIGIQMNLKAQGIDEKELKEHSRELALLAYEDQCTPANP
                     RLAMVDHMQEIIEDAYYGYKERPGRIK"
     gene            33068..34093
                     /gene="adhP"
                     /locus_tag="U1021_000168"
     CDS             33068..34093
                     /gene="adhP"
                     /locus_tag="U1021_000168"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HEM4710767.1"
                     /translation="MKAVVVNPESTGVVVVDKELRSLEAGEALVQIEYCGVCHTDLHV
                     ANGDFGKVPGRVLGHEGIGIVTEIAPGVTSLKVGDRVSVAWFFQGCGMCEYCTTGRET
                     LCRTVKNAGYSVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTCYKAIKEAHL
                     EPGQWIAIYGAGGLGNLAVQYAKKVFNAHVIAVDINNNKLELAKEVGADVTINGLEVE
                     DVPGYIKEITGGGVHSTVVTAVSKVAFNQAIDSVRAGGYVVAVGLPSEYMDLSIVKTV
                     LDGIKVVGSLVGTRKDLEEAFHFGAMGLVVPVVQKRPVEDAEAVFNEMVAGTIQGRMV
                     LDFCHSH"
     gene            complement(34174..35457)
                     /locus_tag="U1021_000169"
     CDS             complement(34174..35457)
                     /locus_tag="U1021_000169"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEM4710768.1"
                     /translation="MKLQKPKGTQDLLPQDSAKWQYVENFTRSIFKQYNYAEIRTPIF
                     EHYEVISRSVGDTTDIVTKEMYDFYDKGERHITLRPEGTAPVVRSYVENKLFAPEVQK
                     PAKFYYMGPMFRYERPQAGRLRQFHQIGVECFGSNNPATDVETIAMAYHFFEELGIKD
                     IRLHLNSLGNPESRAAYRQALIDYLTPLKDQLSKDSQRRLEENPLRVLDSKEKEDKIA
                     VENAPSILDYLDEESTAHFEAVKTMLDSLGIAYVIDTNMVRGLDYYNHTIFEFMTEVG
                     GNDLTICAGGRYDGLVTYFGGPETPAFGFGMGIERLILVLEKQGIELPLDTQLDIYIA
                     VLGQEANGGALDLVQAIRKQGFRAERDYLDRKLKAQFKSADVFGAKAIITLGGSEIES
                     GQVVVKNNQTRSQVETSLEALKTDFASILEELEKQ"
BASE COUNT         9633 a         8618 c         7542 g         9756 t
ORIGIN      
        1 aaaaaatagc ttagaatcgc atcattcgag acgttaattc taagctattt ttgattgttc
       61 aaattttaat cggaagacta aaccaacctc tttttagtaa gtcgccaagc gtttttccag
      121 cttgagctga ccaaatgcat aaagggtaca gataacccaa taaatgaggg ctacacagat
      181 ataaaccgtc atataatcag acttggctcc accgactatc ttggccttgt tgaaaatctc
      241 tggtaccgta atcatggctg tcagagaggt acttttgacc atgtctaaga ggacattgct
      301 cagcggtgga agggcaatcc gaaaggcttg gggaatgatg atttttctgt aaatcacatt
      361 ggtccgcaag cccagggaac gcgctgcctc ccattgtccc ttatcaatgg ccgaaagaga
      421 tgcacgaata atttcagaaa tgtaggcact ggacatggag gtaaaggcga taatagatgc
      481 ggagatagca tctagttgta gccccatgaa aggcaatcca aaatagataa aaaagagaag
      541 gaccatgagg ggaattccac gcatgagaga aatatgggcc atagccaacc aacgcaaggg
      601 tccaaactta gacatccgca tgagggctac aaaaaatcca cagaaagtcc ccaaggcaaa
      661 accaattagg gatagggata gagtgtaggg aagtccctcc aaaatctgtg gaatagcctc
      721 tcttgcaata tctgcattaa aaactgcctg ccagttaata tccatatctt ctcctctttc
      781 ctaaaaacca gatagacctt gccagtctgt gactgacaaa gtctatacaa gatgcattta
      841 atttgttacg aggtcttatt caacttcgat aactggcaat ttatcagcat tttcaactgg
      901 tactgatagg tcttgtcctg catagtattt ctcagaaata gctttcaagg taccatcagc
      961 tttcatcgct tcaagagctt cgtcaatttt ttctttcaag cttttatcag ccttgctcat
     1021 gacaatccct tgttcagttg ggttgtactg agctgcaccc atcttcactt tgatgtctgg
     1081 gaagttagcc ttagcccatt taatagccat tacctgtgta aagtagtcgt ttggaatgaa
     1141 atctgtacga cctgttgata catcacgcaa gtaaacatca ttggttacgt tgtcatagat
     1201 aactggctct gcaccttgtt tctcagccaa cttcatgtac tgagtacctg caccaccacc
     1261 agctttctta ccagtccagt cgctcaagtc tgcagcttcg attcctgatg aaccatcttc
     1321 acggacgata taaccaccaa ctgaatattt ataagggata gagaaattat acttttcctt
     1381 acgagcttca gtcatgtcaa agttgttaac agaaatatct accttaccac tgtcaaccgc
     1441 tgtaaaggct tctgccacac cgatttcttg gtattcaatt tccagtttca aacgcttacc
     1501 aatttcattt atcatgtcaa tttcataacc gaccaattct ttggcatcgt tgtagtaaga
     1561 agttggaaag agagttcctg gtgtagcaac tttcaagaca cctgcttctt gtactttttc
     1621 ccactgggtt tggctagctg aagaagagct ttctgtgctt gttgaagtat ttgaacaagc
     1681 tgcaagagta attgatgaaa caagtagggc tgatgtcaac aattttttca acataggttc
     1741 taatctcctt tagaagcttg ggcttctctt ttttcttttt ctaggtgtta acccaccaac
     1801 ttttataggg taacattttt gcagaaattt ggcaagtatt ttatctgaaa aatgaaatct
     1861 cttacaaatg aagcagacca gctgcctgca gttggtctgc caactgcaaa agtaaatcct
     1921 ctcgtccctt ggctgctgtc aattggatac caattggcaa accgtcagcc cgcatataag
     1981 ttggcagaga aatggctggc tggccacaaa tattggcctg ttgcgtaaag ggagttaggg
     2041 ctaggctgtc ctcgaacatt tgccagatca agtcttgctg ctcttccatg gaatagttct
     2101 gggtgtgctt gaggcggtcc agcaaatctg ctgataggtc aaattgtcca tgcttgggcg
     2161 ctacatcagc cactgtcggc gtcaggagca agtcgtattc ctcatggaaa cgcgccatgc
     2221 tggctccaaa ctggtcccag tccaataggg ccttggagtg caatttggct ggaatggttt
     2281 gcccgctttg gtaaatagcc caggacatga cttccatgtc atccaaggtc atctgacgcc
     2341 caaaaactgc ttcgatttcg tcaaacatct gggccgtgtc cacgctgttc atcaggtaga
     2401 aggatttcat cagggccact ccatccagag gatattctga taaatccacc acttcatgcc
     2461 ccaaatttgc caagtgatga caggcttttt gaaccgcttc taccgcttca ggactgacct
     2521 tgctccctac tggagatttg atatagtagg cgatttttag ggggcgagac aattttccaa
     2581 acacctcctc ctcgctcagc ttggcaagag gaaagggggc ttccagctgg taatcctgaa
     2641 aatgatagag cagacgctgg gtgtctcgga cagacttggt cagggcaaaa ttgacagatg
     2701 ctccctgcca gccacgataa gacttaggtc caactggaat ccgaccacga ctggttttga
     2761 gcccaatcaa gccattgaag gaggctggga tgcgaataga cccaccacca tcagatgccg
     2821 cagcaataga gaccatgcct gaagccagtg ctgcagctgc accaccactt gatccaccag
     2881 cattacggct aggatccaag ggaagattga caggaccgtg caggctggca tctgagatat
     2941 ttttaaagcc gaactcaggt gtgttagttc gaccgactat gatgaaaccc aaatctttca
     3001 agcgttggac ataggtgtcg gtatgacctg ctggtcgacc agcaagcagg cgagaacctg
     3061 cagaagatgg ttgacctttt tcattttgcc ccaaatcctt gagcaagaag ggaacccctg
     3121 caaatggctt gtccagatag tcttcttttt ccgcctcttt caaggcctct tcatactgct
     3181 tgctgataac cgcattgagg gtgggattga gcttttcaat cctgtcaatt gtttcttgca
     3241 ccaattcctt ggcagaaacc tgtttttgat tgacagcctg agccatggct gtcgcatctt
     3301 tccatgtcat aagaatctcc tagataccat atttttccat agactgcttg atggtctgtc
     3361 cgaacgccat aaaatcagcc atgttgtccg acgaaggata aaaggtggtc agaaaagacc
     3421 cgttttcaat caagacacgc tcaattcgtg ttttcatatc ctccaccgtc aaagcctgac
     3481 cgaccaagtc tgacagattg gccatcgaat ccggatttac ttgcggaaat ctgtccgata
     3541 ctgcttgcgg agcaaaactt gccgcataaa aatcagccac cacttgccca cgtttgactt
     3601 gattacctga cacactgata taggcagaaa tggcaatagc ctcttggtaa atccgctggg
     3661 ccaatccagc aaacttccgc cccttgatac taaggtcgta ggtccctgga cagtaggaag
     3721 ttgccacctc accactgaca acctcaaagg gaaaatctga aagtgcctgg gcaatcaaat
     3781 ccaccatgac ctgataagac tcccgcaaat caagcttgtg accagaagga ttgggcaaaa
     3841 tcagagtgac atttaaaatc ccttcatctg caacgactgc caaaccgccc aaactccgaa
     3901 taataggact gtagcctgcc tgaccaatac tggctaagcc cttgtccagc tgggccacct
     3961 gactgtccat catccccaga atgaccgttt ggtccatggg ccaaaaatgt aaaattcctg
     4021 tattggactg acgattgacc tcgcgcaaaa agacctcagt ccacaccagt gccccctgtt
     4081 tcaaacccgt caagccagac cgatcttcgt atttctttat ggtcacattc tcaacccaag
     4141 atttcattcg taagcgttct ctttcaaatt actatatctt attttaacac agagcctgtg
     4201 atgcgtcgga aaaaatgccc agaggatttt ctgaaaaaga aaggagactg gagtttccag
     4261 tctcatctta gaattataaa tcctcaaagg catcttttac cttgtcaaaa aatccttttt
     4321 tatggggttt gacatcaata tttcctgctg ccgcgaattc tttaagagct gctttttggc
     4381 ggtcattcaa acctgtcgga gtgacgatat ttactgtgac atattgatca ccaatagctc
     4441 caccacgaac acttggtgca ccttttcctt tgagtcggaa ggtcttacca gtctgggtac
     4501 cttcaggaat gaccatatcc acatcaccgt gaactgttgg cacatgaact gtatctccaa
     4561 gtgctgcttg gacaaagttg aggttcagtt tatagtgaat agtggttcct tcacgttcaa
     4621 acttgtctga aggttggacc tgaatgacaa cgtagagatc tccgtatgga cctccattga
     4681 aaccagcttc accttgacct gccaagcgaa tacgttgacc ggtttccaca ccagctggca
     4741 ccttaactgt taccgtatgg gcttgttttt catgaccagt tccatgacag gttgtacatg
     4801 gatctttaat ttgttttccg cgaccatgac agacatcaca ggtcatttga cggcgcatgg
     4861 tcccaagtgg agtttgggtg tccacattga tcactccaga accatgacaa cgcccacagg
     4921 ttactggact tgttccaggt ttggcacctg aacctgtaca ggttcgacaa gttgcctcac
     4981 ggttatagga aacttcacgt tccacaccaa aaatcgcttc ttcaaatttc aaattgactg
     5041 catattgcaa gtcatcccct tgacgaggtg cattaggatt gcgcgtcgca ccacctccac
     5101 caaagaagct agagaaaatg tcttcaaagc caccgaaacc tgctccgtcg aaaccaccaa
     5161 agccacctgc tcctccgccg aaacctccat tggcaccagc aggaccatac tggtcatagg
     5221 cagaacgttt ttgagggtcg ctcagagtct cataagcctc ctggacctcc ttgtatttat
     5281 cctccgcacc cggatccttg ttaatatctg gatggtattt tttcgaaagc ttccgataag
     5341 ccttcttaat ctcgtcctga gaagcatcct tggaaacccc cagacgattg taaaattcag
     5401 tattgttcat aatgtaagat attaagccgt taagcgactc aaagaaaaat aggaaactgt
     5461 ccgacgatgc cttgcatcta ggtaaagttt atcttttttc aaagagtcgt aggcgtattc
     5521 agttacacca aaatagtcat gcatgaatac tacatataaa cgactgtgtt cgaataaacg
     5581 aacttgtatt cctttctttg aaaattagaa agtagcccgt gttcagttac gaacactttc
     5641 ctttctgtaa aagttagaag ggtatttacc caaaaacaga ggctgagttg caacctctgt
     5701 gattggaaat tttattgacg aatgatttct attcttggaa aaatgtaaac tgagttcgaa
     5761 ctaggaacat cggaaaaatg actttccata ttctagatac tcaaagaaat tcaagactag
     5821 gttaggtaac tggacaaaga ttgaactagg gttcatctag gagagttaac aaagcttagt
     5881 gaaaaatttc gtggctcggg ataaaaaggt ctcctgaacc atttacgacg tgagaaaaca
     5941 aagtcgataa tactttgttt tcgagctagt aagacaccta ggttagccgc aatagcggta
     6001 accgttaact gatgagctac ttttagtagc aatcagtttt ggcgtcctcg cttccgaatt
     6061 tccattctcg agaagatgag aactgagttc gggctaagaa cttcggaaaa aagataactt
     6121 tccatgtcct agatactcaa agaaattcaa gactaggcta ggcaactgga cgaagattga
     6181 actggagttc atcgaggaga gttaacgaag cctagtgaag aatttcgaag agtactactt
     6241 ttcaataaac tcgccgtcta ccacatcatc gcctgcgttg ttggctgttt gggcaccttc
     6301 ttgacctgca gctgcttgtt gtgctgctgc agcttgctcg tagagtttca ctgcaagggc
     6361 ttgagctttt tcgtttaagt tttcaagttt agccttcatg tcgtccaagt tgtttgcttc
     6421 ttgagctgct ttcaactcat caagagctgc ttgggcttgg tcacgttctg cgtcgaagcc
     6481 tttgccttca gtttctttca gagttttctc agtcgcaaag attgcttggt caacattgtt
     6541 acgaaggtcc acttcttcct tacgtttctt atctgcttcc gcgtttgctt ctgcatcttt
     6601 catcatgcgg tcgatttctt catctgtcaa acctgagtta gactggataa cgatggtttg
     6661 ttctttttgc gtaccaaggt ctttagcttt tacagaaaca ataccgttct tgtcgatgtc
     6721 aaatgttact tcgatttgtg gaataccacg aggtgctgct ggaatgtctg tcaactggaa
     6781 gcgaccaaga gtcttgttgt ctgctgccat tggacgctca ccttgaagca cgtggatatc
     6841 aacagctggc tggttatctg ccgcagttga gaagacttgt gatttagaag ttgggatagt
     6901 tgtgttacgg tcgatgagtt ttgtaaagac gccacccatt gtttcgatac caagtgacaa
     6961 tggtgttacg tcaagaagaa cgacgtcttt aacatcacca gtgatgacac caccttggat
     7021 tgccgcaccc atagcaacaa cttcgtcagg gtttacagat ttgtttggct ctttacctgt
     7081 ttcagcctta acagcttcta caacggctgg gatacgagtt gaaccaccga caaggataac
     7141 ttcgtcaatt tctgacaagc taagtcctgc atctgaaaga gcttgacgaa caggaacttt
     7201 tgtacgttct acaaggtcgt aagtcaattc gtcaaatttc gcacgagtaa gagtcatttc
     7261 caagtgaagc ggacctgctg cacctgcagt gatgaacggc aagctgatct gagttgacgt
     7321 tacacctgac aggtctttct tagccttttc agctgcatct ttcaaacgtt gaagggccat
     7381 cttgtcagct gacaagtcga taccgttttc tttcttgaat tctgctacca tgtggtcgat
     7441 aatcttttgg tcaaagtcat caccaccgag cttgttatca cctgctgttg caagtacgtc
     7501 aaagacaccg tcaccaagtt caaggataga tacatcaaat gtaccaccac caaggtcgaa
     7561 taccaagatt ttttcgtctt tgtcagtctt gtccaaacca taagcaaggg ctgctgcagt
     7621 tggctcgttg acaatacgtt ctacttcaag accagcaatt ttaccagcgt ctttggttgc
     7681 ttgacgttgg gcatcgttga agtaagcagg aaccgtgata acggctttgg ttactttttc
     7741 tccaaggtac tcttcagcgt agcctttcaa gtattgaaga atcattgctg agatttcttg
     7801 tggtgtgtat tctttaccgt ttgctgaaac tttttcagaa gttcccattt ttgatttgat
     7861 agagatgatg gtatctgggt tagtcactgc ttggcgtttt gcagcgtcac caacgatgat
     7921 ttcaccattt ttgaaagata caacagacgg agttgtacgg tttccttctg ggtttgcgat
     7981 gatttttgat tcagttcctt caagaactgc aactgctgag tttgttgtac ctaagtcaat
     8041 accgataatt ttagacatgt gtgttacctc tttttaattt actttctttt caagtagttt
     8101 aacgacatct cggtcaggat tctttttttg gggaatagca gagcggctac tctgatacga
     8161 ctaccatagc cggtctcagc aagcgttcat gcagcttgta gcctttttgg aagacttgtg
     8221 caatgtgttc tgctgggcag tcgtctgtgg ctggaactgt ttgaatggcc atgtgaagat
     8281 ttgggtcaaa gacatcggtt gcgacttcct ccaccccttc ttctttgagg gcttgaatca
     8341 agctttcctg taccatttcc aagccttttt tgacatcctc tgtcaagcct tcgacttgaa
     8401 gggcacgttc caagttatcc aaacttggca agattttctt ggccaagtct tgcgaacggt
     8461 agcgttgaat agtttggcgt tcctcgttgg cacggcgttg gatattttgc atttcagcgt
     8521 gggcacgaag gtacttgttt tcaaattcct ccgcacgctc atttgccaaa tccaattccg
     8581 atttttcagg tgtctccaca acttcttctg ttgcttcaac ctcttctacg atttcttcgt
     8641 ttttgatttc ttctgacaag ttgttcacct cttcattttc tattattact ttgaacaata
     8701 ataaattgag ttcgggctag aaactcagaa aagtgaaata gtccagtgga ctgtttcagc
     8761 ctatttttca atcgtttcct tcacgccctc acatcttaat ttacctcata atgattactg
     8821 ctcaaataac ggtagtaatc ggttaatttc ataaatagga cgcggctgat gatattgatc
     8881 aaactcatct gcctgcggta gttcatgtca actggaccga gcaaactcat ctggcccatg
     8941 ccccgatagg ggattggaaa acgatgatga atgaccgtca catctgcaag ggccgagtcg
     9001 ctgtgttctg ccacggaaat gctggtctgc tggtcgggag ccaagccctg ccgcaactct
     9061 ggtgctaata gctgtgcgct atccaagagt tggtaggtag ctagattgcc gtaagtcagc
     9121 gaggcaactt ttccactgat aaagaccgat tcttgaaaaa gattggaaaa gatgtagtcc
     9181 atcaggtcca agacattgtc cgtcgtggca aagtaacgct gcaccacttg gggaatctcc
     9241 gtccgcagct tatagtggat ggataagacc gtctggtcaa cgaagcgttc atccaccagg
     9301 cgtttgagca cttccaagtc cctggtcaaa aagtttttag gaatggcaaa ctggacggtg
     9361 actggtttgg actggtccag agtcaagact gccagagcat cgtggctact gagctgcacg
     9421 atgtcaaagg aagtcaactg ctgactggtc ggctccacat ctaagatgac cgaagtgtag
     9481 ccagtcaaat ccgctaggac tgtactggcc cgctccaaga tgtcctccag cttgaaggct
     9541 tcaaagtcga aggccttgac cacctgataa acatcttctt catcgatgtg ttccagattg
     9601 agcgagtggt tgacaaagta ttgaaaacca gcccgactgg gcatccgtcc acttgatgtg
     9661 tgggcctttt ccagcaaacc caactgctct agcttggcca tgtcattgcg aatggtagcc
     9721 gaacttgaag caatcatttc ctgcaaggcc ttagaaccaa ctggctcatg atggcgcgta
     9781 aataattcaa caatcagatt caaaatatca ttttgacgtt gggtaatcat ctccgctcct
     9841 ttcatgaaca cgattgattt ttagctttag cactctcgta tgacgagtgc taaactatat
     9901 actcccatta tacgccgaaa aaatggattg tcaagagaaa aagacaaaaa attagcactc
     9961 ttttacctag agtgctaaaa atcagtctga ggacctagtt acttccctac ttcaatcaaa
    10021 aaaatcagag aatatccctg atttcatatc tttatttccc ttgggcaatc aattctgctc
    10081 cacgttttcg gtaggatagg tcgccaactg cttcaattaa aagcttgcca ttttcgtatt
    10141 tgaggacggt aattgagccg ttatcgagaa agatattagc accacgctct ggctctaaca
    10201 gatgagccag ggtggcaatg gtcatgccgt gactaaccac aagagcattg ccaccgccct
    10261 gttttttcaa atcttgggca atagcctcaa aacctgtcaa gatacggtta ctcaagacct
    10321 cccacgattc tgcccagcca gcggtgtctg cttcttgaat acctgctgcg atttccgcaa
    10381 aagtcatgcc tgtcgcatca actgtccctt tcaaacgagg caggacacct tggaaaagct
    10441 cggcatcgta catgccttca aaactaccga aacaccattc acggatacgc ttgtcttggt
    10501 agtaagggat ttttcccaaa atccccaact cacgctgggc gatggtcatg gtctgaacgg
    10561 ttcgacccag gtcactggac acggctagtt taaattcaag gcccgcatcc ttgagcccca
    10621 agcccaattc acgaatccct tcctcaccag ccttggtcag cggcgtatca caccagccct
    10681 gcacgcgccc aatggtatta aacatggttt tcccgtgacg agaaatatat aatcttacat
    10741 ctgccattcg tttttctcct tgtcatttct tactattagt ataacaaaaa accgactgct
    10801 tgtggcaatc ggtctacgtt ttttagttct taaagctatg aatcggtgct ggaatctgac
    10861 caccacggtt gataaagtcc acagacgaag cttgattgac cttcataaca ggagctgttc
    10921 caagaaggcc gccaaattca atcatgtctc cttcttttcc aagcggaata atgcggaccg
    10981 cagttgtttt ctggttgata actccaatag ccgcttcatc cgcaatcatg gctgcaatgg
    11041 tttcagcagg cgttgtttct ggaatggcaa tcatatccaa acctacagaa cagatagccg
    11101 tcatagcttc taatttttca aggttgagcg agccattttg caccgctgca atcatgccct
    11161 catcctcaga cacaggtata aaggcacctg acaggccacc gacttggttg caggccatga
    11221 ctccaccctt tttcactgcg tcattgagca gagcaagggc agcagtcgtt ccgtgcgtac
    11281 caacggtttc taagcccatt tcctccaaaa ctcgtaccac tgagtcgcca accgctggcg
    11341 ttggagcaag ggacaggtcc acgataccga acttgacacc cagacgttca ctagccatat
    11401 tgccgaccaa ctgaccgata cgggtaatct tgaaagcggt cttcttgacg gtctccgcca
    11461 ccacatcaaa gctctcacca cgcacttttt caagagctcg cttgaccaca ccgggcccag
    11521 acacgccgac attgatgacc acatccgcct caccgacacc atggaaggca cccgccatga
    11581 agggattgtc ctcgaccgca ttggcaaaga ctacaagttt agctgccccc atatcagaag
    11641 cctccgccgt ctccttgatg atccgcccca tgtcccgcac agccgtcata ttgatacccg
    11701 tcttggtcga gccgatattg actgacgagc agaccttaga ggtttgggcc aatgcctgcg
    11761 gtatagagtt gatgaggatt tcatcccctt tttggtagcc cttttgagca agagctgaaa
    11821 agccaccgat aaaatcgatg ccgatctcat gagccgcctt gtccaaggca tgagctaggg
    11881 gaaggtaatc cgtggcatcc gtcgccgcac caatcaaagc aataggtgtt actgacaccc
    11941 gtttgttgac aatgggaatg cctagttctg ccgcaatctc atcgccgact gctaccaagt
    12001 tcttggcctt ggtgacaatc ttggtataca ctttctccgc agccttgtcg atatccgagt
    12061 cgatacagtc caagagggaa atccccatgg tgatggtccg aatatcgaaa ttctgctcct
    12121 caatcatttc aatggtttct ctaacctgtc taatatccat gaaatctctc cttacaagtt
    12181 gtgcatagca tcaaaaatgg ctgcactttg aatgttgatt ttcacattca aagcctgacc
    12241 ataggcttct agttctgcac gaagcttggt gaaatctttc ttctcatctg acgacaccac
    12301 cgccatcatg gtaaaatact catccaaaac agtttgggaa atatcgtcaa tattgagccc
    12361 taactccgca atcttagtcg caacacccgc aacaattcct gacttatcct taccgacaac
    12421 tgtaacaata gctttcatct gaacacctct tctaaatttt catatatttt atcataaata
    12481 tacagaaaaa ggtaaaaagc ttttgatttc tacctgtatc gtacgtgttt acaactccaa
    12541 ctgtttcttc tattcggcta cggctagagt tgcctagttt ttaagttgca aactttctat
    12601 ttctaccagt ctgtgataca ctagtgtcac cgaattctat tatttgttgg ttgcgacaag
    12661 ctaccaacct ttcttttgtt cagaaaggac atttatgaag attatcaagc aattgtggtg
    12721 gttcttttcc cttgagaaaa aggcctatct gattgggatt ttatcactct gtttggtcag
    12781 cctcctcaat ctccttcccg cttctatcat ggggcagttg attgaccaga ttgccagcgg
    12841 acagttgact gagcatcgct tgctactcgg ggtagctggg ctcatcttgt cagccttggc
    12901 catgtacggc ctccgctatc tttggcgaat gaacattctg gcaacatctt atcgtctagg
    12961 aaaaatcatg agggctcggc tgtttgacca ctttatgcac ctgtctccat ccttttttca
    13021 gcaacatcgg actggggatt taatggccca cgcaaccaat gatatcaatg ccctgacccg
    13081 actagcaggt ggtggcgtca tgtcctttgt tgatgcaacg gtcacagcct tggttaccct
    13141 aattacgatg agtatgagca tttcctggca gatgaccttg gttgcaatcc tccccttacc
    13201 cttcatgact ctaaccacta attttttagg ccgtcgcacc catgaaaatt tcaaggcttc
    13261 acaggcagcc ttttcagagc ttaacaacaa ggtccaggaa gctgtttctg gtataaaggt
    13321 caccaaatcc tttggctacc aagaacaaga aacggtagct tttcaggaag tcaaccaggc
    13381 agccttcttg cagaatatca aaaccatgcg ttacgatgcc ctgttcaacc ctgccgtcct
    13441 cttttttatt ggcctgtcct acctgctgac ccttctggtc ggctctcact tcatctcgca
    13501 aggtcaggtc agtctgggcc aactagtaac cttcatgacc tatttagatc tcctcgtctg
    13561 gcctcttatg gccatcggtt ttttggtcaa tattagccag cgtggtgatg tgtcttacaa
    13621 tcgcatccag acccttctca acatttcttc agaagtcgtt gaaacagacc aaccgctgcc
    13681 tgcaccaagc aatggagaga ttgtctatga gattagcgaa tttgcctatg ataacatacc
    13741 agtcctccaa gacatccagt ttcacatcaa aaaagggcag acaattggcc ttgtggggcc
    13801 aacaggttct gggaagacca gcctgctcaa gctcctcatg cgagaatacg atgtgacaaa
    13861 tggacggatc ttgctcaatc aagaaaatat caagaactac aagctagctg acctacgacg
    13921 attaatcggc tatgtacccc aagaccagtt cctctttgcg accagcgtta ctgaaaacat
    13981 ccgcttcggc aatcccgatt tatctctaga tcaggtagaa gaggccgctc gggctgtcta
    14041 tgtctatgag gatattcagg atatgcccga ccgcttcgat accatggttg gtgagaaggg
    14101 gatttccctt tctggcggac aaaaacaacg gttggctatg gcccgcgcca tgattctcaa
    14161 tccagatatc ctgctcttgg atgactcgct ctcagcggtg gatgctaaaa cagaacacgc
    14221 tattctcgaa accatcaagc aagaacgcct tgacaaaacc accattatca ccgcccatcg
    14281 cctgtcagct attgtccatg ccgatttgat tctggtcctt gaagatggga aaatcgtaga
    14341 acgagggcgt caccaagaat tactagatga aaaaggctgg tattacgata cctatatgat
    14401 gcagcaacta gaaaaggagg aaactgatgc cctctaagac caaacaagcc agtgttttct
    14461 ggcgactttt gtcctatctc aaagcctatc gactgctgac agtccttgcc ttgagctttt
    14521 tgttgctgac taccgtggtc cgcagtctga ttcctcttct agcttcttat tttatcgacc
    14581 actatatttc ctcgatttct gagactgccg tggctattct agctgcctac ttcaccctct
    14641 atctgctcca aatggtgctt caatattttg gaaatctctg gtttgcaaaa gtttcttaca
    14701 gcattgtcag agatattcgc cgggatgctt ttgggagaat ggaaaagctg ggaatggctt
    14761 actttgacca gactcctagt ggctccattg tctcgcgaat caccaatgat acagagagca
    14821 tttcagagat gttttcaggg attttatcca gttttatctc agctctcttt attatcatca
    14881 cgactctttc gaccatgttt gctctggatt ggaaattgac ctgtctgatc gtcctctttc
    14941 ttcccttgat tttcttattg gttgatcaat atcggaagcg gtcagctccc attgtggcca
    15001 agactagaag tctgttgagt gccatcaaca gcaaactggc agagagcatc gaggggattc
    15061 ggattatcca ggccttttct caagaggaga ggctaaagga agagtttgag gctatcaacc
    15121 aggaacatct ggactatgcc agtcgttcca tggccttgga cagtctcttt ctccgccctg
    15181 ccctatcact tgttaagatt ttggcctatg ctcttctcat gacctatttt ggtttggact
    15241 ggtcacaggc tggaatttct gctggtctta tttacgcttt tatccagtat gtcaatcgtc
    15301 ttttcgatcc cttgctggat gtcacgcagc atttttccac cctccaaacc tctatggtat
    15361 ctgccggacg ggtctttacg ctcatggacc agaccatcga ggagccacta cagcttgacc
    15421 gagggaccaa gattgacaag gggcatattg tctttgagga tgtttgtttt tcctatgacg
    15481 gcaagcggca aattctggat aaggtttcct ttgaagtgag acagggccag accatcgcct
    15541 ttgtgggtgc tacagggtca ggcaagtctt ctatcatcaa tgtctttatg cgtttctatg
    15601 agttccaatc tggacggatt ttgattgacg gtcaggatat tcgtagcttt tcgcaagaag
    15661 aattgcggtc cgcgattggc ttggtcctgc aagatccctt cctctttcac ggaaccattg
    15721 catccaatat ccagatgtat caggatattt ctcaggagga gattgaggaa gcggctcgat
    15781 ttgtggatgc tgctcccttt attgagaaac ttcctgagaa atacgaccac ctggtcactg
    15841 agcggggcac caccttttcg acaggtcaac ggcaacttct ggcctttgca cgcaccatgg
    15901 ccagtcagcc taagattctc attttagacg aggctaccgc caatgtcgat tcagagacag
    15961 agcaaacggt gcagacctct cttgaaaaaa tgcgaaaagg gtggacaacc attgcgatcg
    16021 cccaccgttt atcaactatt caagatgccg actgtatata tgtcttggac aaggggaaaa
    16081 tcatcgagtt cggcaatcac gaagaacttc tagccttcaa ggggcactac caccgcatgt
    16141 accaattaca agcagggcag ttggcagcga cctagaaatc tgtctattcg aaaagccaag
    16201 ttccaaaatg gacctggctt ttttattttt ctacattatt gagaactgaa gacatcaatc
    16261 tatctctctt taactcacat tcgctgaccg acgggcatag gctttccagt cgatcccacg
    16321 cgcttcgcac cagttttgta catttggagc caaaaccaaa tctttcttgc gaaggtctgc
    16381 aatattctta gcccccaaca tggtcatgat ttcagccatc tgccattgat aagtcttaat
    16441 agcctgcaag ccgtcgtcaa aacgatgccc cttaccatcc ttgacatact ggaggaaatg
    16501 gttggacata ccaacaaggt ctgcaccgag ggccaatgat ttaacaatat ctagtggcgt
    16561 cttaatacca ccagatgcaa tcaggcttgg gcgaacttct tcagaaacag acatggcttc
    16621 taccaaggaa gtcacggtag actgccccca accttctaga taagtataat cattgaaggt
    16681 acggcgggca ttttcaatct tggcgaaatc cgtcccccca gtaccagata catcaatggt
    16741 cttgacaccg acagaagcca gctgggctac tgtttcacgg ctcatgccaa aaccaacttc
    16801 cttgacgatg acaggtactt ccatctcacg tacaagggtt tcaatattct tcaaccacat
    16861 agtaaagtca cggtctccct caggcatgac aatctcctgg ggggcattga catggatttg
    16921 aatggcattg gcctccaaca aatccaccgc tcgcttggca ttctccacac tatgatgggc
    16981 acctaggttg gcaaagataa tcccgtaagg attttcccga cgcatcacgg agaaggtttc
    17041 cgcaacagac ggatccttaa tcgccgcact gaccgaacca gaagccagag caatctttcc
    17101 aaaatgcccc ataattccca acaagcgatt gatttcgcgg gtcttcttgc ttccgccagt
    17161 catggcattg acgaagaaag gaaaggcaaa atccaaacca gccacactgg tcgaaatatc
    17221 cacctcatcc accttggtct gtggcaggga atgatggaca aacagagttt ctgtaaagtc
    17281 cttggccggc gtggcactat attgctgatt ggccaagcca acgtgttgat ccttgcggtc
    17341 taaaccaaat tctcctagat aaaacatagg gttctcctta ttctctactt gtgatcttta
    17401 gttggagtgg aagaatgccg gcttgttgcc aagccttctc aatcgctact ttttgttcct
    17461 tactgtctac caagcaaatg ccgcagtcac ctccgcctgc accagatgat ttggccaccg
    17521 ctccataagt ctgagccagg tcacagagtt gactcagttg aggcgtttca atgaccaaac
    17581 ccattcctct cgcaaagtct tgtaagagct tgcggttttg agtaatagcc tgtctagctg
    17641 ataccaagtc atttgtctga caggctacta tcaactgttc tacacaggtc ttggagtcgg
    17701 ctagaaacct gctatgaatt tgctcttttt cagcctgact tttttggctt tccatctggg
    17761 aaactagact atccgtcgaa gccgccgacc ctgtccatcc caccaagagg tctaaacctt
    17821 ggggtaactg gatagggctg atagacaaac cttgccaatc actttccacc agatccagca
    17881 gggacagctc tgccattttc cctaaaagcc aagaacggtc cagggaatga taggcgatca
    17941 agccgccaaa actggaggac gccaaatccc caaaggagcc tgtcatgcct aacttggtct
    18001 gggccaaggc tgccagcttg taggtcagga gggcatctgg tcggtgaccg tagtaggtca
    18061 acaaggcctt gaccgtcgca accgttactg cccctgacga ccccagacca tacttggcac
    18121 ctgaagtctg gtcatccagg tcagactgga ccgctagact gtaagttcca tgacaagcat
    18181 agcccttggc tgtcagatat tcctcggtta gctgcatagc tgtttcaatc agagcatagg
    18241 gatggtcatc ttggatgaaa atctcatttc ccttacgctc ccagattaga taaagatctg
    18301 ccttttgact ggaatgaaga ctgccttggt cacttgtttc aatggtgacg gttaggtact
    18361 ggtcaaccgc cgcaatcacc gcaggatagc cagcttcgac aactgcatat tcccctgcca
    18421 gaaagagttt tccaggtatc tttacttgta ctttcatgct acaagccctt ttcaaatgct
    18481 gcttgtgagt cctgccaatc gtcttcgctg agaacataag cggcaggacc aggcttacta
    18541 gtgatgattt tctctcttgg gaagactttg gccaattcag ctactagctc atccatttga
    18601 cttgctcggc agaggacctt gacatttggt cccgcatcca tggtcatgta ggctgataag
    18661 ccagttgctt cacgaacctg acggactgcc tcttgagcca ctaggctatc ggctgaccaa
    18721 taggtaaagg gtggattggc agagagcgtt gttgcatgca ttttcatgcc attgtgctct
    18781 gtaatctgac caagtttttc aaaatcacag ctagcaatag ctgccttgat gtccaccaag
    18841 tcttgtttgg ctgtatctac ccaggctgag taaaatggtg aagtggcaac tgtgtggtcc
    18901 attccctctc gactagcaat ctttttcggt ccggtattga ccgccaagac gaccatgccg
    18961 atatcccaat ccgcatcgtc aatggggtga gccatagaat cttccgaacc cgttcccata
    19021 tcccactcaa caaatccacc gaataggcta cgggtgctag agccagaacc cctgcgagca
    19081 agggttgata gggtggctgg tgacaaatct aaatccaagg cagttgcggt tgcaagtgca
    19141 agggctgcga aggctgatgc tgagcttgcc aaaccagctg cagtcggaac aaaatttaga
    19201 ctttccactc gggcaaatgc cctttcacct atatattcgc aaaacaaatc caaaaatcga
    19261 gaaattttta aaatttcttt ttctttttgt aacattccgt tgagatagaa ctcatcagca
    19321 gttaattctg ggtcaaaaac gaccttggta tccgtataaa atgcgtcaag ggtcagggat
    19381 agactagaat tcatgggtag gaataattcc ttatcgcgtt ttccccagta tttaatcaag
    19441 gcaatattag tatgggcacg ggctatgcct atttgtttag tcattggttt ctcctaagta
    19501 ctgtatccag gtttggcggg cacctgcttg ggcaagaact tgggcaagag cttgggcatc
    19561 ttgggctgtt cttgccaggg caatcatgca accgcctcgt ccgccaccag ttaatttggc
    19621 tccgagggct ccattttctt gggcaaagct gactagctta tccaggctgg gagcagacac
    19681 gcctaatttt tgcaggaggg tatgggcttg gttcattctg ccgcctagaa gctctgcctg
    19741 gtctgtggct aaatctttct tggccagtcg ggtcaagttc cccagttctt ctactagctt
    19801 gatagcctct ggctttttct ccaacaaatc agccacgtct gaaatggctt ctaaggtgtt
    19861 tcccgtcaca cctgtatcag ccactaccaa atgggcatga agtgtcagct caaaaggttc
    19921 gatgggctgg tgcttgataa aaaagacggg agacttgccg ctggtggtcg ccgcatctat
    19981 gcctgatgga ttgccgtggg caattttttc cgaagactgg acgatgtccc agagttcgct
    20041 gtcggtcagt tctttttcat agtaggcaaa gagggcgcgt gctactgcaa ctgccacggc
    20101 tgcactggag cccataccgc gctcggcagg aatggtggaa ctaatctcga tatgaatagc
    20161 tgggtctgtc ggtgctccaa tacgatagag cgagaagcgg atggcatgct tgaggctttc
    20221 ccagattttt ggcatcttgt gcactaagcc tttatagaag tcacaagcaa cagtcagcgc
    20281 ttccccttga gcagttacct gagcaataat ttcaacagca gaaaaaggca tagcaattgc
    20341 tggttgccca tagaccaccg catgctctcc catcaaaatg atttttccat tcgcttttcc
    20401 tactaccgac atacttttct ccttatacaa tcactactat tataccattt ttacataaga
    20461 atagaacaca cgaaaacagc cgaccgcagt cgactgttct ctaggagatt atatgaaaaa
    20521 gaaattcgct atttctagct tgaatatagt atatagctac aaacttaaaa gaaactgaaa
    20581 attttcttag ctttatctta aattgattct tgttttgaat acctatactg aaaaaatagc
    20641 acccctgctc ggaaggcatt atctaaaatc gttgcaatcc aaatggctga caaaccgatt
    20701 ttaaaaaatg ttacaagtaa ataagctatg ccaatccgca ctagccacat accgatagtt
    20761 gtgacataaa agggtaatct agcatttccc aaaccttgcc aaagagctgt cataataaga
    20821 gtgccagctg taaagggaac tcccaacatg gcataaaata atactgtttg actagcttgt
    20881 accgcttgag tatccttagt ataaagactg attaggaaag accccgcaaa ataagtcaca
    20941 ccagccacca aaaacataaa cagcaaagaa aggccaaagc ttgttcgaaa aatatgtcga
    21001 accatagcct tatcctgtct gtgtttcgct gtaaggatga ttgtagcggt agcaatccct
    21061 aaagccggca tatagttaaa ctgcgtcagg gtttctccaa tcgcatttcc agctaccgtc
    21121 gctgttccta agctggtaat caaagctacg actaccacat ctcccacccg catcatcaac
    21181 cgttcaccag ttgctggcag ggcaagtcta agcagttctt tatcaaagga ccaggtccat
    21241 ggttttaaag aaattggtaa gcgagaccaa agcaggctac aaccaatcaa ccgcgataag
    21301 accgtgccaa tcgcaactcc agctacacct gcatgaagca caaagactgc aaatgctgaa
    21361 aatagtgcat ttagaacgtt tgagagcagg ctgatataca taggaaaacg tggttccccc
    21421 aaggttcgta agattgcact caaacttgtc atgagtccca aaaaaggtgc tcccccacca
    21481 accaatatca aataaagacc tccagcctgt accacttctg actctgcccc caagctagta
    21541 agtactattg gacctgccag aactgaaaaa attcctaaaa ggagaccgat aaaaactgta
    21601 aacttgacac tttcactagc agttcctcca ataccttctg aacccccttc acccaaatcc
    21661 tgagccaaac gagaagacac agctgctgct agggcaataa aaaccgcctg atagacggct
    21721 aaaatattat tagcaaggga aactccagac aaagctacaa tgccaatact ggctactaga
    21781 taagagtcta ctacccccat taacatctgg agaaggtttt cccccatggc tggaaaggca
    21841 atggttaaaa tttctttata ggtttgtttg ttcataatct ctatttcaac tttttaatat
    21901 ctactatttt atcacaaacc agattcaata gctcttcatc gtgagaaatt aacaaaacca
    21961 acttattctt catttttaag tctactaaag cggaagcaac ttgctgcatt cgtctcaaat
    22021 ctaagccgct cgtcggttca tcaaaaataa aaatttcctt atctgccagt aagctagcta
    22081 ctatcatcac gcgctgttgt tcaccgcccg ataaactgac cggatgtctc tccaacaaat
    22141 ccgataggcc aaaacgagct accaaatgtt catcgacagc tctatttttc cttccaagag
    22201 taagttctcg ctcaacactt tccgcaaata gttggagtcg aacatcctgc ataacaaagc
    22261 ctgttttttc caatctctgg cgactagata agatttgacc ttgccaagaa atcctactct
    22321 tcttatcttc cgctaaaccg accagataac gagcaaggct tgtttttcca gaaccattcg
    22381 ctccaaccaa acccaccacc tgtcctggtg ccaagcagag tttttcaatc tcgtagagag
    22441 tattctcttt ctgacttacc gataaatttt caacaagtaa accctcttta tcattaacaa
    22501 actggtctgc cagatccgct attgcccgcc cataaggctc cgagtcataa caacgcagtc
    22561 ccatatcctg acggcattct tctgtccgac ttaaaaactc atctgctaga taatccgtca
    22621 ccacttgccc atcttgaaaa tataaatagc gatctgccaa ttgactgaga taagacagtc
    22681 tatgctcggc aataataatg gtcttgcctt ggctttttaa agttttcaag atgtcctcta
    22741 caatcgcaat cccttcctga tctaggttgg cagtcggctc atctaaaacc aagacatctg
    22801 tcccttgcat ggctgcaacg gccaaggcta gacgttgttg ctgaccacct gatagactgg
    22861 aaatcgttcg ctggctaaga gaagccaaac caaataattc cataacccaa gccaggcgat
    22921 tctcgatttc ttctcttgac aaaccctgat tttcacaagg gaaaaccaat tcctgcaaga
    22981 cctgactatg aaaaaattga gtagacggat gctgaaagac tgaagcaatg tgccgagata
    23041 tttcctccag actagatttt tgtaaatcca agtcccctaa gaaaatttgt cccgaaagct
    23101 gagcaggata atattctggc gtcaaaccat ttaacacctt gagaaaacta gacttcccag
    23161 agccactctc cccacataaa acaacacact ggccttttgg aatggtcaga tcctctatct
    23221 gcaaggctgg tttatctgct cctgaataag ttaatgctac attttttacc gtcacagccg
    23281 gacgagaatc agaaaaccga gacaacataa acaaagactc caatctagca cggtccaaga
    23341 cgaccgaata tatgcaggtg atttcgtaga tacagccaaa ccttttgtca gactggctac
    23401 tgtcaattcc tgagctgttc gcaagagaga catcatcaag ggaaccaaga aaaactccat
    23461 gtactggagt ggcttacaaa ccacatctct cttccgtaaa aaaattcctc taaccttcaa
    23521 agaggcacaa atcgtacgag catcctgttt aatggcaggt aggaaacgaa acattactcc
    23581 caacgtcaaa agaaatacct ctggtaggtg ccatttccgc aagccatgaa tgagttcgta
    23641 accacttgtc gtcatcagta atagatgtcc tgccaaaagc ggaggccatg tataggtcaa
    23701 tacaagcaac aaatgcgtca gccatgctgg taaaaatgta atataggaca acagacaaaa
    23761 aatagaatag gctatcggac tcattatagc cattttccgc tttccagaaa accagaaaag
    23821 caggctaagg cctaagacca gcactgcatt ttctaatatt gtaagcctca tcccataggt
    23881 aaaactagtg aagatgacga gaataatttt tgtacgagca tctaatttca tgaaagataa
    23941 cctgattgtt taaaatagcg ctgaagcata tattgaccaa acaaaccact gataagagct
    24001 gttaagataa tggtcgttga caaccatagc acactctctg gagtgaaatc aagcatgaca
    24061 cgagcgatgt attctgccga ttttccacgt gccaaaagat tggcctcata ggcatctcgc
    24121 atgaaccaca taagaataat aggtcctaag tttccaaaag agaaaatgat atagctaaaa
    24181 agattggtcc atttttgttt atagtgacct gacttcgcta ccatttctgc caaaaaacca
    24241 aaggtcaaac ttgggagaaa ggccgctgtc atatagcctg acaggaaaaa gaagcaggcc
    24301 atgaccgcac ccaccaaact gatggagcca aatttaccaa ccttagctac caataacata
    24361 taaacaggtc ctgccaaaag tgctgctcca gcaggtgcat acatcatgtt acccgaacga
    24421 tcaaaaacca agctcaacaa ggttcctaga ccaacacaaa caaagtagag ggcagcaaaa
    24481 gcccctgtta ccatcagatc ttttacttgt aatttcttca tttatttttc ctttactaat
    24541 tgtccgtctt ccaagcggaa aatggtatcc gcacaagcca tggtcgagct tctatgggaa
    24601 atcaagaaga ccatgccctg acaatgttcc ttaaccagct ggataaagcg ggcttcattg
    24661 agcgaatcta ggttactagt tggctcatca aagatatagc agtccgcgtt tttgagcaag
    24721 gcccgcatga gttccaagcg ttgtccctct cctgctgaaa agtcactggc ttccacgagc
    24781 gtatccaagc cctgcgatgc tgccaaaatc cgttctttca tgtggcattt ttctgccaag
    24841 tccatgataa cttcatccga cacatccgtc cgccccaaga ggagattttc ccgaatggtc
    24901 tggcggaaga tttgtggcac ctgtggtaca taggcaaagg atccttgtaa atgagcctta
    24961 tctacctgcc gactatccaa gccagacagg cggatttgac cttgctgcca gtcataccac
    25021 cgcatgatta atttcattaa ggtggatttt cctgcaccgg actcaccgac caagccaata
    25081 atccccccct gttcaaactg aacagacagg ttgcgataga gccctgtttc tcggtcatca
    25141 tagtcaaagt ccagttgctc aatggcaatg tctttcacgc tgacctcaac caagtcacct
    25201 gttcgctcta cttctttttc atccaaaaga gcatagatat tgcgaccagc attcatggct
    25261 cgcttgaaac caagaggcag acggctgagt tccaagaagg gagcaaagga gctagtgaaa
    25321 gaaaccagca gagccacacc agttgccgag cccaaactct gactacccac caaatcgaag
    25381 gtcagccagg caaagcccat gatagacaga cctaccacca agaaggaaac agcatactgc
    25441 atgaagttgg tctgggcgac ctttcgctcc tgaccattga cctcttggct tttctgcgtc
    25501 agcttggcaa aacgagcatc tgtctgctgg aactgcatga ggtccttcat gctcttgaga
    25561 ctttcgataa agtaggaaac atagccctta cgactggcat tttgctcctt gagcaagggc
    25621 tgtaactgct gagcaaaacg atttggaata gcaatcgcca acagagcata ggtcaccaga
    25681 gccagcaaag ccaaacccca gctggataga ccgaaataaa ccgtcaaacc aagtgccacc
    25741 agaatccctg tacaaatggg tgcaatggta tgggcaaaga aaacttccaa ggcctcaatg
    25801 tcctccccaa tcatcttaag caggctacca ctgtcctgcc ggtccaattt cccaggagcc
    25861 aaggaccgca attttgcgaa aatcaagcga cggtaagccg ccagcgtatg aaaggccaca
    25921 taatgaccaa agtaatgctc accatagcgg aagcccccac gtaaaagagc taggagaatg
    25981 aggattccca aggtccatag cggagcagga ttgccagtaa gggctacaaa agccagatag
    26041 accagcataa ctggaatagc aatggtcacc acctgtccca agaccgcaaa gcaaaccgcc
    26101 accgcaatcc gtggcaagag gtgcttcatg gactgcaaga gtctcggaat cagcacacct
    26161 gttggcattt ctttcttatc cataaactgc ttcctccaat tctctttgtt gatcgaccag
    26221 ctgaccatag gccgagctag tctgataaag cgtggcatga ttgcctgtca cagctccctc
    26281 cgcagacagg aagaggatgt catctgcctg ctccacttgt ttcatcttat gggtaatgat
    26341 gatgacaagg gcatccttgg ccaccaagtt tatcaaatcg taaatcaagc cttcattgtc
    26401 ctgatcgacg ctggacgtca cctcgtcaaa gatataaagg gagcgttttg ccaaaactgc
    26461 acgggcacag ataacctgct ggcgttgacc aggcgacaag aaagcaccgt catcgcccac
    26521 aatcgtgtct aacccgtctg gcaaatgctt aacaaactgc aagaccccat gctgatctac
    26581 ccaagccaag atgtcctcct tggaccagtc acaagccatg cgtaaatttt catagatcga
    26641 ctggttaagc aaggttgact ggcccgacac atagaggacc tgctcattca gagataactg
    26701 actgacacct aaaatctcct gctcacccaa gtaaatcgct cccttatccg cccgcaagcg
    26761 tcccaagagc agctgggcca aggtcgtttt cccctgccct gactcacctg ccaaagcata
    26821 gacctttccc gctgtcatgg tcatagaaat gtcttttaaa actgactttt ctccgtaggc
    26881 aaaggccaaa tcttctagtt ttagactgtc aaaagcaggc acatggacag aatcgatttc
    26941 ctgctccgct gtcatactgt ccaagaaacc aaagatgcga tccgccatct tggtattcat
    27001 catcaccaag tgcataccgt agccctgctc acgtatgggt gcaaaaaact ccgtcgcaat
    27061 gaggacaaag aaaagcatac taaagaggga gagattgcct gccgctaggc tattgaccgc
    27121 cacaaaacca gacaagccaa tccccagata catgaccgca tccatgtagc ccaccgcttg
    27181 tagctgaaag ctgagtagct ccatggtcgc atcgcggaag tcctccgcct gttcattgaa
    27241 ggtcttttca taagccgcgt ccgcctgata ggaataaagg gtattaagcc ccttgagatc
    27301 gtccaggaaa agattgccca catccatgta ggatccccag tagcgattca tgatccgctt
    27361 ggaccgcttc tgcatagcga tgatggaaac gggaatcaga ggcaaggcca agatgaaaat
    27421 aaccgcaccc agcgggaaaa tcagaaaaac cagcaaaaga actgtcgcac agttgaactg
    27481 ggtccgcaag gaagaagcca tgtagtagga ataataggta tccaggctat caatcccctg
    27541 tgaagcgacg ttaaagacat ccgctgctgt cgcttttgac tcaaactgac cgtccttggc
    27601 caaaagtgcc tcaaagaaag actgcttgag tgaatcccgt gcaaactggg aacccaagcc
    27661 ctgcaaacgc ttggcgatca aagccacacc atagccaaaa gcattgagac ctaccaagat
    27721 gaggacaaac tgtaccacat caacctggcc accctcatag taggtcacaa agccttgagc
    27781 aatcaggtag aaggaaataa tccgcatcaa aaattgcacc caggatagaa aggctgccaa
    27841 ataaaccagc ttcatcttgg gtttgatgcg ttctttgagc ctcttcaaga gggctttttt
    27901 cttttctctg gagattttct cctgttcttg tgccatacgc cacctcatct acaagtattc
    27961 ctatatagta tatcattctt tgaattatct gtaaatttta atttaaacag caaaaagaaa
    28021 acaaactgtt caaaatgagc agtttgtcat aaaatgaatc gaaattaaac acccaaatag
    28081 cgctctactt cagcctgcat atcggcagct gcaacgacgg tattgtggcg gacagatgcc
    28141 gtttccaagc cgtccacagc tggtggcaag tctacacctg aaatctcatg caattttgca
    28201 agggcttcaa agtcagacaa acctgactgg cctgtcacag cttcaaccgc aactactggg
    28261 aacttgtaag gactagcagt tgatgcaatc actgtcggag tctgatcccc tgtttgctcc
    28321 acatactgtt tatagacagc tgaggcaaca gccgtatgtg gatcttcaat gtagtttgac
    28381 tcgtcataga cacgcttgat ttccgcagcg gtttcttctt ctgtcgcaaa ggcggcagca
    28441 aagagagaga ggatatccgc gtcagcccct tgaatatcat actgaccagc tgtgttcaag
    28501 gcttccatca gctcggctgt ttttgcagcg tcattgcaaa agagatggaa aatcaagcgc
    28561 tccaagttag aggacaccaa gatgtccatg gacggactag tcgtcacgcg gaaggtacgg
    28621 ttcttgtcgt aaacgcctgt cgagaagaag tcggttagga cattgttatc gttggacgca
    28681 cagatgagct tgccaactgg cagaccgatt tgtttggcgt aataagctgc caagatgttt
    28741 ccaaagtttc ctgttggaac ggtgaagttg accttgtcgc ccgccgcaat ctcaccagtt
    28801 ttaaccagct gagcgtaggc atagacatag tacacaatct gtggcaccaa gcggccgatg
    28861 ttcatggagt tggcagatga aaactggagt ttcttagccg ccaacttggc acggagtgcc
    28921 tcatcattga acatgtgttt gacatttgtc tgggcatcgt cgaagttacc gtcaatggct
    28981 accacgtggg tattagcccc tgtctgtgta gtcatttgca attcttggac cttagatacc
    29041 ccgtcacgtg ggtagaagac aatgatttgc gtgccaggaa cgtctgcaaa accagccata
    29101 gctgccttac ctgtatcgcc tgaagtcgcg gtcaaaatga caatctcatt ttccaaacca
    29161 tgctttttcg ccgcagtcgt catcaagtaa gggaggatgg acagagccat atccttaaag
    29221 gcaatggttg aacctcggaa gagttccaaa ttgtactgac cttttagctt aaccactggg
    29281 gcaatagctg gtgtgtcaaa cttgctatcg taggcattgt tgatacagta gtccaactca
    29341 tctgccgtaa aatcgtccaa gaaagccgac aaaatcaact tggcaacttc ttgataagaa
    29401 gcgtctttga gaacagaaaa gtccaagtca actgctggaa tagaaatcgg tgtaaacaaa
    29461 ccaccgtcgg tcgccaagcc ctgcaatatc gcctgactag ccgatacagt atttttagca
    29521 tcgcgtgttg attgatatac taatgtcatg gtatccctca taaaaaatct attttttcta
    29581 ttctaccaca aattgacaga aaattgtgaa agatagatag aaaagtctct ctttctcggc
    29641 taaaccctaa ctttccaacc actttcgctt tttacaggat ctccaccatt atttctaaac
    29701 aaacaatccc ctatttttca atagaggatt gtcttacgat atttggaggc aatttaccta
    29761 taaatcatac tccgttcaac tgagtaggat acgatttgct actcctacct agactttttt
    29821 ctagtcctaa gtctttctag gcagattgac gaaggtgaag ctaaatcact aaggaatgat
    29881 tttctaaacg agacaaggca aagcgacgta gacataacta aagttaggca aggagcttta
    29941 acgatgtatc gtgacgaaaa tccttacttg atgcgacctg gacgttcttt gtaaccgtag
    30001 taggcatctt cgatgatttc ttgcatgtgg tcaaccattg ctagacgtgg gttagctggg
    30061 gtacattgat cttcgtaggc aagaagagcc aattcgcgag agtgttcttt gagttctttc
    30121 tcgtcgatac cttgtgcttt caagttcatt tggataccga tgcgttcacc gaggtcgtaa
    30181 actgcttgtg cgtatgctgc aacagcttct tctggtgttg aacatggcaa acctagaaga
    30241 cgagcgatgt cttggtattt ttcatctgct ttatagtagt tgtacttagg ccatgtagct
    30301 gtcttagctg gacgagtacc gttgtagcgg ataacgtacg gaagcaagat agcgtttgta
    30361 cgaccgtgaa cggtatggaa acgtccacca atcttatgag ccattgagtg agaaatacct
    30421 aggaatgcgt tggcgaaggc catacctgcc atagttgatg cgttgtgcat tttctcacgt
    30481 gatacaaagt cagcattctt cactgagctt tcaaggtttt caaatactag tttgatagct
    30541 tgaagtgcta aaccatctgt aaagtcgttg gctactgttg aaacgtatgc ttctgtagcg
    30601 tgagtcaata cgtccatacc agtatccgct gtaacgtgtg caggtactgt caatacgagt
    30661 gctgggtcaa cgattgccac agttggtgtc aatgagtagt cagcgattgg gtatttacgg
    30721 ttgtttgctt tatcagagat tacggcaaac ggtgttactt ctgaacctgt acctgatgta
    30781 gttggaatcg cgataaactt agatttctta ccaagttctg ggaacttgaa ggcacgttta
    30841 cggatatcca tgaatttttg aactaggtca tggaaatcaa ctgttggttg ttcgtagaag
    30901 agccacataa ctttggcagc atccattggt gaaccaccac cgagtgcgat gattgtatct
    30961 ggtttgaagg tacgcatcaa ttctgtgcct ttataaaccg ttgtgatgtc tggatctggc
    31021 tcaacgtctg agaagatttg ataaacaact ttattacgac gaaggtccaa ttgttcgatg
    31081 atacgatcta ggaatccaag ttctaccatg gcacggtctg taacgatcat gacacgttca
    31141 acgtcacggc atttttggag atattggata gagtcacgtt cgaagtatgt tttagaagga
    31201 actttaaacc attgcatatt atttctacgt cttcctactt tcttgatgtt gagcaagttc
    31261 atagcactta cgttatcact gattgagttg cgtccgtaag aaccacaacc aagtgtcaat
    31321 gatggcaaga atgcgttgta aacatcaccg ataccaccga aagtagatgg agagttccaa
    31381 ataacacgga tagcacgtac gattgtacca aactctttcg ccaattctgc gtcttccgta
    31441 tgaatagctg cagagtgacc gagaccgtgg aattcaacca tttggcgagc tgcttcaaga
    31501 ccttctgcac gaccttcaac tttcaagacg gcaataacag gtgacaattt ctcacgagtc
    31561 aatggttctt tttcaccgat ttcagcaacc tcagctgcca agatgtttgt accttctggt
    31621 actgagaagc cggcctgctc agcgatccat gcagctgggc gaccaacgat gtctgcgttc
    31681 aatttacctt cagcacagtt tttgctgtta gctttcacac cgaagcagta ttcttcaaga
    31741 agagcttttt ctttcttatt aacgaagtaa gttttgtaag atttgaactc tgttacaaac
    31801 tcatcgtaaa cttctttatc aatgataact gcttgttctg acgcacagac cataccgttg
    31861 tcaaatgact tagacataac gatgtcatgt gctgcctgac gaatatttgc tgatttttca
    31921 acataggctg gaacgttacc tgcacctaca ccaagggcag gtttaccaca agagtaagct
    31981 gcgcgcacca ttgcgttacc accagttgca aggattgttg caataccatc atgtttcatc
    32041 aactcagatg ttgcttccat agatggtttt gtaatccact ggatacagtt ttcaggagca
    32101 ccagctgcca cagctgcttc atagacaaca cgagctgcat gagcagaaga ttcttgtgca
    32161 gatgggtgga aggcaaagac aatcggatta cgtgtcttca aggcaatcaa tgatttaaag
    32221 attgctgtag aagttgggtt tgttgttggt gtgataccac aaacaacacc gaccggctca
    32281 gcaatcaaag tcaaacctgt cacttcatct tcttcaataa caccaacagt tttcgtgtga
    32341 cgcatgttat tgacaacgtg ctcacaagca aacaagttct tagtagcctt gtcttcgaat
    32401 acaccacgct tagtttcttc aaaggcgtgc attgccaatt cgccatgttt atcaagggct
    32461 gcaaccgaag ctttcgctac aatatagtct acttcttctt gaccaagttt acggaactca
    32521 tcaagagcaa ccaaaccttt ttgaacaagc tcatcgacgt gcttgcgcgc ttctaccaac
    32581 ttttcttctg gtgatactac ttttttatca gccattgtgt tcctccaaat atactcgcta
    32641 actatttgtt aactttttca caatgttatt ctactatttt ttattttatt tgtaaaggga
    32701 aattgttaat tttttcacat tttttctgtt tcgttataga aagcgcttac tttttcctat
    32761 tttcagaaaa cattcagatt tgtttctgct ttgtttggtc aaaaaataca taaagtaaga
    32821 caaatcttta tcatttattc tttctctaac atttacgata ctagtttatc aagaaaacgc
    32881 ttccatgtaa atagattttt ttgaaaattt tgtagtaatt acgtgataat tttcaatttt
    32941 atattcattt gtccctcctt ttctactctt gcatttttgt tcatattgtg atattcttaa
    33001 caatataaaa caactatatt aacacatcca aaaatgtata taaaatatta aaacaggagg
    33061 tctgcttatg aaagcagtcg ttgtaaatcc agaatctact ggtgttgtcg ttgtcgataa
    33121 ggaacttcgt tcactcgaag ctggtgaggc tttggtccaa attgagtact gtggtgtttg
    33181 tcacactgac ctccacgttg ccaatggtga ttttggtaag gtccctggtc gcgttcttgg
    33241 tcacgaagga atcggtattg ttacagaaat cgcacctggt gttaccagtc taaaagttgg
    33301 tgaccgtgtc agcgttgctt ggttcttcca aggctgtggt atgtgtgaat attgtacaac
    33361 cggtcgcgaa actctctgcc gtaccgtaaa aaatgccggc tactctgttg acggtggtat
    33421 ggctgagcaa tgtattgtaa cagcggacta tgcagtaaaa gttccagaag gtcttgatcc
    33481 agctcaagca agttctatca cttgtgctgg cgttacttgc tacaaagcga ttaaagaagc
    33541 tcacttggaa ccaggtcaat ggattgctat ctatggtgct ggtggacttg gaaaccttgc
    33601 tgtacaatac gctaaaaaag tcttcaacgc tcatgttatc gccgtagaca tcaataataa
    33661 taaattggaa ctcgccaaag aagttggtgc agatgtgacg atcaacggac ttgaagtaga
    33721 agatgttcct ggatatatta aagaaattac tggtggcggt gtacactcta ctgttgtaac
    33781 agctgtttcc aaagtagcct tcaaccaagc tattgacagt gttcgtgctg gtggctatgt
    33841 ggtggctgtc ggacttccat ctgaatacat ggacctcagt atcgtgaaga ctgtgctaga
    33901 cggtatcaaa gtggtcggct cactagttgg tactcgtaaa gatttagaag aggccttcca
    33961 cttcggtgct atgggactag ttgttccagt cgttcaaaaa cgccctgtcg aagatgccga
    34021 agcagtcttc aatgaaatgg ttgccggtac tatccaaggt cgtatggtct tagacttctg
    34081 ccactcacac taatgcgttc tccactattt tcaagaagtg attatccaat cgcttctttt
    34141 ttgctttcta aaataaaaag aagcagcttt agactactgc ttctccaatt cttctaaaat
    34201 acttgcaaaa tctgttttaa gtgcttccaa gcttgtttca acttgacttc ttgtctggtt
    34261 atttttgacc acaacctgtc cagattcaat ttcgctacca cccagggtaa tgatagcctt
    34321 ggctccaaag acatctgctg acttaaactg agccttgagc ttgcggtcca gatagtcacg
    34381 ttctgcacga aaaccttgct tgcgaatggc ttgaacaaga tcaagcgctc cgccattggc
    34441 ctcctgaccc aaaaccgcga tgtaaatatc taactgggtg tcgagaggga gctcgatgcc
    34501 ttgcttttca aggactagga tgaggcgctc aatgcccatg ccaaagccaa aagctggcgt
    34561 ttctggtcca ccaaagtagg tcaccaagcc atcataacgg ccaccggcac agatggtcag
    34621 gtcattgcca cctacctcgg tcataaactc gaaaatagta tggttatagt agtccaaacc
    34681 acgcaccatg ttggtgtcaa tcacataagc aatgcctaag ctgtccaaca tagtcttaac
    34741 cgcttcaaag tgagcagtac tttcttcatc tagatagtcc aagatggacg gtgcattttc
    34801 cacagcgatc ttgtcttctt tttccttaga atccaacaca cgcaaaggat tttcttccaa
    34861 gcggcgctgg ctatccttgg aaagctggtc cttgagtggc gtcaggtagt caatcaaggc
    34921 ctggcgataa gcggcacggc tctctggatt gcccagactg ttgaggtgga ggcgaatgtc
    34981 cttgatcccc agctcctcaa agaagtggta ggccatagca atggtttcta cgtctgtcgc
    35041 tgggttatta gaaccaaaac actccacacc aatctgatgg aactggcgta gacgaccagc
    35101 ctgcggacgc tcatagcgga acattggacc catgtaatag aacttagcag gtttttgtac
    35161 ttctggagca aacagcttgt tctctacata ggagcgaaca accggtgccg tcccttctgg
    35221 acggagggtg atatgacgct ctcccttgtc atagaaatcg tacatctcct tggtcacaat
    35281 gtccgtcgta tcgccaaccg aacggctgat cacctcgtaa tgctcaaaga ttggtgtgcg
    35341 aatctcagcg taattgtact gtttgaaaat gctgcgggta aagttttcca cgtactgcca
    35401 tttggcagaa tcctgcggta gtaaatcctg tgttcccttt ggtttttgta atttcatgga
    35461 ctttctcatt tctctaaata ttgcccttta ttttatcata ttttggtctt ttttggaaat
    35521 ggcagagcag acaaaaaggg agtgggaaa
//
LOCUS       DASFQD010000005        34429 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.005, whole genome shotgun sequence.
ACCESSION   DASFQD010000005 DASFQD010000000
VERSION     DASFQD010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 34429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34429
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.005"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            40..282
                     /locus_tag="U1021_000170"
     CDS             40..282
                     /locus_tag="U1021_000170"
                     /inference="COORDINATES: protein motif:HMM:NF016419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin"
                     /protein_id="HEM4710769.1"
                     /translation="MHKINWGVRLRNKTFWWTLIPLIVLLAQQLGFNWVPKDWETTFG
                     TIMSILTVVGVINDPTTNGIADSEQALHYYEPKVDR"
     gene            370..1089
                     /locus_tag="U1021_000171"
     CDS             370..1089
                     /locus_tag="U1021_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011285561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEM4710770.1"
                     /translation="MTTVNEVVNFAKDLANRGQGVDYDGWYGKQCVDLPNWISGKFFG
                     KALWGNAIDLIKSAKQHGFEVHYMPTSESPRPGAIFVKNYWAGDGINYGHTGLIIGVS
                     GNTVQTIEQNLVGNLSVGGPAQYSSQQISNLVGWFYPPYSDSTTVATQASSGNLGKIK
                     DEKGTMTVKVSLLNVRDKPGLDGKVVATYTNGEQFNYDSVYIADGYIWVSYVSRSGVR
                     RYVAAGEESNRRNVVPYGIFK"
     gene            1413..1916
                     /locus_tag="U1021_000172"
     CDS             1413..1916
                     /locus_tag="U1021_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001841550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710771.1"
                     /translation="MELRELVKDYRKNFVGKSCQVSTNYSDLTNLIVHFQATDLHHLF
                     GLHKITSDYASRTLSQIESGKFNLSDFKSLPSYREVTRRVTLYPFIAEIFMKQATEYC
                     VIRKDLSKNSMNLDLVFFEGDNRNVKVLGLRRDKSGFYRLVTLHESSARKYTRVRKTK
                     ITDIVWL"
     gene            complement(2094..3188)
                     /locus_tag="U1021_000173"
     CDS             complement(2094..3188)
                     /locus_tag="U1021_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018368331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4710772.1"
                     /translation="MAYFRKRENGWEYRISYKALDGSYKQKSKSGYRTKSDAVQAASQ
                     AEIELSSGIVEDKNITLAGYFEKWMLVHKKPHVGPETLGKYEYTHKLITKYFRDAKLS
                     KINATSYQNVINELATNFVKDSVKRFNSHIRASIKVAIHQGILKKDFTEIVKIFSDVK
                     SKREEDKYIELDEYEQLITDYRKTIKYQSHFFLYTVGKTGLRFSEAAGITEPIVDREN
                     MCLRIYRTYKVYGKKKGWGPTKNPQSERDVPFDSEWLKAYDEYMKVGYIDNPDKRLFT
                     KLTGTGENKILKKKTRQTFNVHGLRHTYVSWLIYHDVDVVTIAKLVGHKDATETLKTY
                     SHLFKAKQEQSFDKVRNLMEKFGADLGQTH"
     gene            complement(3461..4297)
                     /locus_tag="U1021_000174"
     CDS             complement(3461..4297)
                     /locus_tag="U1021_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009014217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEM4710773.1"
                     /translation="MASGRTNDEIALYVAQTITELEEYLHHLTKNGDPDDARADKISQ
                     WVESWTKYLKQEKKFNPRSIPAFKRGSIVYVDLGFNVGTEYGGIHYAIVLNKKDSRNN
                     TLLHILPLTSIKETTDVDNLKYYQLSLSNEIHRLLIQKAQNNIKLIAEKKIIFEEKQE
                     KIDQKIAELKSILKDQVVSEDLNPRFEEYFENELSIVTSEQQEIDKIVRDMTAQSEYL
                     EKLINKIKNLKMGSIALLNQVTTISKLRLLDPINKKSLLTDITLSAETLDIIDDALKN
                     IL"
     gene            complement(4366..5115)
                     /locus_tag="U1021_000175"
     CDS             complement(4366..5115)
                     /locus_tag="U1021_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000168829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4710774.1"
                     /translation="MDTQIAFPAMVKQYRTASSLTMEQLAEKIGKTKSTISKWEKGTR
                     SPKIQEIEELANFFGIDPQIMMFGKSYTPTTAPNSLVEQISDKVAYLDQELKEPRHSA
                     WISHGERLLSEQEKENTVNELQATYHTYNYYDQPASAGTGQYLNDVKVETIELPIEVE
                     ADFVVPIYGDSMEPEYQSGDYIFVKLSVDLSDGDIGVFEYYGDAYIKQLIINEDGAFL
                     HSLNEKYNDIKIDKDSDFRIIGEVVDVYRET"
     gene            5500..5664
                     /locus_tag="U1021_000176"
     CDS             5500..5664
                     /locus_tag="U1021_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017650606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710775.1"
                     /translation="MSWKKILFGSYEKTFVSQDGRAKTTISIKGGLLLNLLALVGLVG
                     LIWWLIGLFT"
     gene            5681..5887
                     /locus_tag="U1021_000177"
     CDS             5681..5887
                     /locus_tag="U1021_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001157160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4710776.1"
                     /translation="MTETAFEKLLNDSGMKRNVIAERMGLTRSGFYRKQKKPKERFDG
                     DEMAKLAEVIGVDPQKVLAAILIS"
     gene            6198..6419
                     /locus_tag="U1021_000178"
     CDS             6198..6419
                     /locus_tag="U1021_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HEM4710777.1"
                     /translation="MSKQRYGRPSTGQKGNNRPTVVISRENYDEVDNLSIGTGMSRSA
                     IIDYFISEGLKRARIEEVVIKTKRLVLED"
     gene            6434..6571
                     /locus_tag="U1021_000179"
     CDS             6434..6571
                     /locus_tag="U1021_000179"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710778.1"
                     /translation="MEEKQTFATAVNEYAKEVFEKADKKDPASVAAVAELIKAMKGIF
                     Y"
     gene            complement(6568..6786)
                     /locus_tag="U1021_000180"
     CDS             complement(6568..6786)
                     /locus_tag="U1021_000180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710779.1"
                     /translation="MKKYIVDMLEQKQILALTLSDGQTVIVIEVANEHKGYDNLIEVV
                     ERKDKTSFLLNLDQVITVRPYIPTEWVY"
     gene            6855..7061
                     /locus_tag="U1021_000181"
     CDS             6855..7061
                     /locus_tag="U1021_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4710780.1"
                     /translation="MELGKRIKVIRVSLGETMEQFGQRFNTSKGTVNNWEKGRNAPNK
                     ANLKKIADLSDNPREFVTLYLTRI"
     gene            7147..7449
                     /locus_tag="U1021_000182"
     CDS             7147..7449
                     /locus_tag="U1021_000182"
                     /inference="COORDINATES: protein motif:HMM:NF024139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4710781.1"
                     /translation="MDAMLEAFEVLKQEIVQEVLSEVRKELAIERKPSQMSDKAIGVK
                     EACEIMGMSRNPFMAIVKAGKIPYHMAGTHFRFDQRDIEYYKAKMKVKKKVKGLSA"
     gene            7446..7703
                     /locus_tag="U1021_000183"
     CDS             7446..7703
                     /locus_tag="U1021_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710782.1"
                     /translation="MTEAILTLGIFAVPMLAVGIVEQRKAEKKRMCEEFEEIRRRDYL
                     YGFKAGMGYQSTCDIEKARNGLKRDAQQVDREWKRYAEMVG"
     gene            7684..7887
                     /locus_tag="U1021_000184"
     CDS             7684..7887
                     /locus_tag="U1021_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710783.1"
                     /translation="MQKWLANFLKQEKPAIPRPLYTLEQENQLLHDMVREIAEQRNEY
                     RIENQRLRDENERLRRILEYDSD"
     gene            8028..8300
                     /locus_tag="U1021_000185"
     CDS             8028..8300
                     /locus_tag="U1021_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000989846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4710784.1"
                     /translation="MLAVILSNKPDWVVYPEEIAKRMGVSRQFVNKHFKILEEAGYLF
                     VIKKGGGRAKGVTPFRFFNDKPFTDKFKEYIQQKLDEELSTGNNVQ"
     gene            8559..8861
                     /locus_tag="U1021_000186"
     CDS             8559..8861
                     /locus_tag="U1021_000186"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710785.1"
                     /translation="MKQNNTFIVLRDKEGNYLAGFENNPQVLAYSADWVSAINEALTI
                     PEKYFYGEDNEQYLAMTKMFDAELIKVQAEYTLTTLDGQEPAEPVKDADDTVGTFF"
     gene            8924..9064
                     /locus_tag="U1021_000187"
     CDS             8924..9064
                     /locus_tag="U1021_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710786.1"
                     /translation="MKLRERENLVWQRATAGEKEKLLDTGLADKAGYIRLVRELGRKY
                     VA"
     gene            9379..10257
                     /locus_tag="U1021_000188"
     CDS             9379..10257
                     /locus_tag="U1021_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019292867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HEM4710787.1"
                     /translation="MTTNQVVTHKNFFNAPNVQKSFDDVWKGAGVQFATSILSVIQGN
                     ASLKSASNESIMTSAMKAAVLNLPIEPSLGRAYLVPYKGQVQFQLGYKGLIELAQRSG
                     KYKSINAGPVYKSQLVSYDPLFEELTLDFTQPQDEVVGYFASFSLLNGFRKLTYWTKA
                     EVEAHGKKFSKTFGNGPWKTDFDAMARKTVLKHILSIYGPLSVEMQTGMQSDESENNN
                     TSRDIKNAEPVQSAGQDILDKMTGKIVAEEPAKDVTISEVEAVEEVGVDISKMETTEQ
                     VIDAETGEILDEEEPF"
     gene            10257..11471
                     /locus_tag="U1021_000189"
     CDS             10257..11471
                     /locus_tag="U1021_000189"
                     /inference="COORDINATES: protein motif:HMM:NF018751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1351 domain-containing protein"
                     /protein_id="HEM4710788.1"
                     /translation="MSEELSLFDNLESMAPVPTATVLDFDFEFTPAQITIVGKDLLEQ
                     ALTGYVEKYKNYTVTAETFEDDAKVRAELNNLQKKVKSAVKEKLADYNKPIDEVKAWV
                     DGLLEPIAKIGKSIDEGVKAFEEQERLKRAKTIEELFQEAIANTGKDIDIRLFSKYFD
                     EFSKKTCFMADNVRPNKATVNMVASLVEEEVAKKEEYESALIKITEAAAKADFGPAPY
                     VRNFEQGASLADILQAIADDKALADRTREEVRRKQQLAKRIEELTAIAESKGLNPKKY
                     ADMLESGVSALAVHEELVNDARKWQEEQDRMEQEFLAQHGAICGNAQNRPNSDEIQRE
                     NASEGKYTSEQKNASEDKIELNKKVVKWQGDFRITFPDGETAKLFGGPGGLYEQHGIV
                     VEKLGEWTKIND"
     gene            11464..12300
                     /locus_tag="U1021_000190"
     CDS             11464..12300
                     /locus_tag="U1021_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease-like domain-containing
                     protein"
                     /protein_id="HEM4710789.1"
                     /translation="MTKLTEENYYQDRQWLSNSRFKAYMDCEAKAKAIDDKEWTDKRD
                     DTALLVGNYVHSYFESEEAHANFIDTNKTRMISSRGATKGELKKEFQVAQNMIDALKD
                     DKDFLPLYHGNPGDDVRKEMILEGEIFGIKVKGKVDSINLTEGYFVDLKTMKTIRGLE
                     WSDVERKKMPGAAANILGFRYDVQLGLYQELLRQMGYPNFVPFVVAVSKEDVPDKMLV
                     DLPQYRLDEGLQFFENNVERVAGIIAGEIKPKGCGNCDYCRSKRTLDRVINLDDLIAG
                     IF"
     gene            12314..12589
                     /locus_tag="U1021_000191"
     CDS             12314..12589
                     /locus_tag="U1021_000191"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710790.1"
                     /translation="MTNFAEKMKQLKEESIAEFSLVAGTIGEARELLELVKSNGIKWF
                     SGEPIEHMSEYIYKKMQTYPEKRFVLNFRNGFNLKKQLTIFCTWEHR"
     gene            12915..13091
                     /locus_tag="U1021_000192"
     CDS             12915..13091
                     /locus_tag="U1021_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017644253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710791.1"
                     /translation="MVAKLGRPKSENPRHHNTRIRMTDDELTMLEYCSKVTGKTKTDI
                     LMLGLEKVYKSIKK"
     gene            13214..13453
                     /locus_tag="U1021_000193"
     CDS             13214..13453
                     /locus_tag="U1021_000193"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710792.1"
                     /translation="MAKNKELEEIINHIHLAFRESEKSAELMQWDNLISIVINRDFDE
                     KKASVFFEAHACLLHTFANELIEFVLDYFVEEEEN"
     gene            13455..14261
                     /locus_tag="U1021_000194"
     CDS             13455..14261
                     /locus_tag="U1021_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /protein_id="HEM4710793.1"
                     /translation="MELQIFKNEQFGEVRTADIKGEVYFNLNDCCKILELSNPRKTLE
                     RLNPKGVTTSDTLTAGGIQQANFINESNFYKLVFQSRKPEAEKFADWVTSEVLPSIRK
                     NGAYVTNQKAVEIMSNPNALGEFLQGIANQVKQLELQNSNLVEKNEVLEVELLEARKQ
                     ARYLDVIIESKGAVRVTQIAADYGMSANQFNKLLHELGVQHKVNGQWILYKKYMGKGY
                     TDSTTFDYLDKNGQARANMTTTWTQKGRLFLYELLKNNDILPLIEQDEVA"
     gene            14272..14721
                     /locus_tag="U1021_000195"
     CDS             14272..14721
                     /locus_tag="U1021_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HEM4710794.1"
                     /translation="MKFEIPIEPKPQSRPRAGRRLGRTRVYEDDKMTAWRDKCTALVA
                     QLYKGPYFDKAIKVEATFYMSAPKSISEPPKPKSKAKKVQQYDDFINERIYVDIKPDL
                     DNLEKAVYDSISKAGNVWTDDNIIVEHTTRKVYSPRPRIEIKVEEVL"
     gene            14727..15011
                     /locus_tag="U1021_000196"
     CDS             14727..15011
                     /locus_tag="U1021_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006151492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HEM4710795.1"
                     /translation="MIYACTCPECEGQEEQFNNVTKPKHYQGKYGMEALDVVKNFIGN
                     LAGESAYYWGNVIKYLLRFQQKNGVEDLKKARQHLDWLIEEMEESNENNK"
     gene            15131..15487
                     /locus_tag="U1021_000197"
     CDS             15131..15487
                     /locus_tag="U1021_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016622902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710796.1"
                     /translation="MNKTIENVKITKTFLGREDHGILTCYLTVEGDGFGVSIGGYCLD
                     KYDENKRKRVAYHKSFELIDRILEVVGVSTWEELQGKYIRVKSNGFGGRVTKIGNLIK
                     DDWLDFDTFFKEETDE"
     gene            15480..16010
                     /locus_tag="U1021_000198"
     CDS             15480..16010
                     /locus_tag="U1021_000198"
                     /inference="COORDINATES: protein motif:HMM:NF019467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1642 domain-containing protein"
                     /protein_id="HEM4710797.1"
                     /translation="MNKQEAIEIIEQSKIKIANRGRVIFKAGEIIVENVQVDYVPLEV
                     VVNTIDQIHEPQKVVVPKFIADSIEYCKNEEGYGLLRAMDYCDEYNDTGEWLEHNQET
                     FALAWLFGYEIEQEKLYTVELFNGQPLVEEKNILYFSSDLAASNAHVGKDKLEAAGFG
                     WVFDCNGVKVVEVKND"
     gene            16003..16191
                     /locus_tag="U1021_000199"
     CDS             16003..16191
                     /locus_tag="U1021_000199"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710798.1"
                     /translation="MIKKYHRVKCELHGWLNCHYDYDQDKYSTAEAISDFIYSIIDDF
                     KVKAKDVTVETVERSEVE"
     gene            16331..16687
                     /locus_tag="U1021_000200"
     CDS             16331..16687
                     /locus_tag="U1021_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000612373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710799.1"
                     /translation="MIPKFRAYNPATNNWYNSDEVFVCDGKIYLNDDDFEDLIQNNDV
                     ELMQSTGLFDINGKEIFEGDIVRMHSGELLPVKLHHGMFEPVCYYASRAFGRVGNVFE
                     NPELLEHPDFREVNNE"
     gene            16680..16901
                     /locus_tag="U1021_000201"
     CDS             16680..16901
                     /locus_tag="U1021_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000180424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710800.1"
                     /translation="MSNEKLGVLLVDVPDIMFFKYNYIIDTEEVGASTFIINGTDFLE
                     KLERLAYKCTQEEAKKYPQFKWVALEELV"
     gene            16898..17101
                     /locus_tag="U1021_000202"
     CDS             16898..17101
                     /locus_tag="U1021_000202"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710801.1"
                     /translation="MTIKELINELQMYDEDKEVVLTIANVHPVLHELIDLETGLVRLS
                     SDCQIGFEFNLLSDNRLEIEGVW"
     gene            17102..17362
                     /locus_tag="U1021_000203"
     CDS             17102..17362
                     /locus_tag="U1021_000203"
                     /inference="COORDINATES: protein motif:HMM:NF013540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4710802.1"
                     /translation="MTTADKIKHILQKTGWTREQFASEMGVTTLSVYKWLDGRPPRQR
                     MLDKIDELYEQVKPYEPRALAPRGKIRLVYPYYSHQRQPWEK"
     gene            17437..17844
                     /locus_tag="U1021_000204"
     CDS             17437..17844
                     /locus_tag="U1021_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1492 domain-containing protein"
                     /protein_id="HEM4710803.1"
                     /translation="MNKAKAILKDLRNLDLYIASLIRRREKIEASLLSSPKWTADKVS
                     GGAKKKQDDVYVELMATADDIEKKTAEAIKKQRELQNIIDNLNDDTSKTILSLVYIDK
                     MSMYDVMDEMRISDRTYYRLLRIARKELEQVWQ"
     gene            17945..18034
                     /locus_tag="U1021_000205"
     tRNA            17945..18034
                     /locus_tag="U1021_000205"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17980..17982,aa:Ser,seq:gct)
     gene            18280..18744
                     /locus_tag="U1021_000206"
     CDS             18280..18744
                     /locus_tag="U1021_000206"
                     /inference="COORDINATES: protein motif:HMM:NF015550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HEM4710804.1"
                     /translation="MVDEFGLNSRERNFADEYIANGNNATQAYLKIYPTSGEANAANK
                     GSAWVRKGEILNYIKIKTKERLDASGLKSSDIIDRLIDIAFGRPIIGYSKQTDKLTGE
                     VIKHIEYESTAPIDEQIKALELLGKYLKLFTDKVEAEVNGTVVFANEADIPD"
     gene            18722..20026
                     /locus_tag="U1021_000207"
     CDS             18722..20026
                     /locus_tag="U1021_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018166024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="HEM4710805.1"
                     /translation="MKQTSQINVDLPKIVGKGYGQFWRSRNFYRVVKGSRGSKKSKTT
                     ALNFVVNLLKCPWANLLVVRRYSNTNKQSTYTDFKWACNQLKVSHKFKFNESLPEITV
                     KATGQKILFRGLDDELKITSITVDVGSLCWAWFEEAYQIETEDKFSTVVESIRGSLQD
                     TSAFAFNRLDGTYGNVPFYKQITVTFNPWNERHWLKKVFFDEDTKRSDTLALTTTFRC
                     NEWLDEVDIKRYEDLYITNPRRARIVCDGEWGVAEGLVYENVQVADFDKESLLQSGNY
                     KLCVGLDFGFTHDPTALVAYLVDDKNKNIYVFDEHYQVGLFTKDIAEMIKNKGYASSQ
                     IVADCAEARLIEELKSEHGIRRIKASRKGKDSVMAGVSKLQGYKIVVHPSCTHIMDEF
                     YSYCYQQDKEGKWLNKPEDKNNHLMDALRYGLQCAERKEWLY"
     gene            20037..21536
                     /locus_tag="U1021_000208"
     CDS             20037..21536
                     /locus_tag="U1021_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000894655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEM4710806.1"
                     /translation="MLDVKDISQVERGIKKLIDNDLTDQSKEKMRTALDYYRGKHDIL
                     DYRLYYIDDIGQPKEEKYRSNTKIAHGFFTELVDQKVQYLLSNPIEIQTEQQELQEYL
                     AEYVNEEFQLVLQELVEGASQKAVEYVFWRIDKDGRLVFEVADALKVIPIYNHDNQME
                     QVLYYVKDEIVVDGKNKEVKKIQLWTKDAIHYFVYADNKVRLDDTVTVNPTPHLLVKD
                     KKNEEVLGKGHGRLPFMVLHNNREKLTDLEPIKDLIDDYDLMACALSNNLIDFDHPIY
                     AVRGFEGDSFDKLVTNLKAKKTVGVGPDGGLDVKTVDIPIEARKEKLRIDKEAIYKFG
                     MGFDSSQTGDGNITNVVIKSRYSLLDLKCNKIEVRLRRIIKQMLELIVENINQRYSKA
                     YNTSDIEIIITRDIIANEVDNATIAKTEADTKQVAIQTILDAAPRLDSRTVLELLAGI
                     LEIDPDEVEKALDEEEYRGDLEQDTEVEDGVEPVSEGDATSTTTTGPEG"
     gene            21652..23121
                     /locus_tag="U1021_000209"
     CDS             21652..23121
                     /locus_tag="U1021_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001858300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710807.1"
                     /translation="MSAMLEAIDSQSQKLKTGLNGTIPDHLERVGKMAYNELFYEYEQ
                     TRSAIQFALLPEEELKTIIETPVAGLRLSQRINDGVVSDLRKSIKSELTRSFVHGLSY
                     QRTAKRLSELGSSSYRRALNITRTEAGRVSAIARQRSQKEAVDLGIEFKKMWVATLDK
                     RTRNTHQHLDGQQVGPEEYFEHNGLRTLQPHMFGIASEDCNCRCRTISRLKDDDTPLL
                     RRDSETGEVVEYRNYREWENKKLSSVEVDTSPKPYDFIDLSNPENQTIENFEIILSRA
                     KVAVEEYKKHTGIDLVSEFNNKNFRSMSNPYDDNKAKFLKFLYNKIGYDAKPQKLSDT
                     KGYNLFYRGITGSKETGSTAKDFYNRLVDGEYDFSGAMSSMVGRGIYFSIEQRMGQVY
                     AKNGILAEMYFPKNAKVIDDQVLKSFRNAFSNEQLSNPELAAINDLINYDIGPKINVA
                     GDRHFDFWAIFSGHDAVQRDNYEILAVYNRGVLGVKDND"
     gene            23114..23404
                     /locus_tag="U1021_000210"
     CDS             23114..23404
                     /locus_tag="U1021_000210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710808.1"
                     /translation="MIKTTYTLLISAFSLIEYEKKYQNFDMFDQLKKITRRLDMKNAP
                     DFYPITLDDFSDTSISDEDKAILFDFIKQNQNKLDEHEDSFDIFVQLAPREI"
     gene            23437..23760
                     /locus_tag="U1021_000211"
     CDS             23437..23760
                     /locus_tag="U1021_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015984458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710809.1"
                     /translation="MNRDKKPGMETVKIGGIVYEVSKKPDLQGKTGEWGHIEYKTGKI
                     ALDDSTSQQIEDQTLIHEIAHGILVEAGYVQHEEEQADRIGKILYQVLTDNDFSWLWK
                     GGTNG"
     gene            23753..23932
                     /locus_tag="U1021_000212"
     CDS             23753..23932
                     /locus_tag="U1021_000212"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710810.1"
                     /translation="MASFSIDLELNWENQDELQRLLQNVDKAQQAYQNALKELSEFKP
                     DIQVVSKNGGYKAHE"
     gene            23907..24167
                     /locus_tag="U1021_000213"
     CDS             23907..24167
                     /locus_tag="U1021_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018166057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710811.1"
                     /translation="MEVTRHTNKRIKKKRELIEQVQGTKEAVDIALNIIKSLLDENAK
                     QANEIAELRSIIERNAQATNSRFDKIEKQVANSNAKKPFWKR"
     gene            24363..24950
                     /locus_tag="U1021_000214"
     CDS             24363..24950
                     /locus_tag="U1021_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage scaffolding protein"
                     /protein_id="HEM4710812.1"
                     /translation="MDWLKELIEKHTAEGKTDIDAVMNAVKKEFPKHAVPKDVYNEQA
                     EKLKVANSTLDTLKKSNKDNEELQNELKTYKDKVSQLEAEAKETAKKQTIKDALINAK
                     ATDVDYLMYKLGNLEEDDSGKIKDLDQKIKDLQVNLPNFFESAEAKEDKLNGYEHLGG
                     AGLLPGSAESTKDVIDVIGNKELNLTQFLQEKAKG"
     gene            24957..25946
                     /locus_tag="U1021_000215"
     CDS             24957..25946
                     /locus_tag="U1021_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003055861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coat protein"
                     /protein_id="HEM4710813.1"
                     /translation="MSNEITKIIDTITPKVFNAYMDQYINEHSLLVRSGAVVADERVS
                     RNITAGGLTVNMPFWNDLSGEDQVLSEDKEIETGKITSGKDVAAVLYRGQGWSVNELA
                     GVVSGSDPMRAILDRIGGFWLRQEQKVLMAVLKGLFATSGPLADTHLLDLSKKTGKAA
                     VVDAKAILDAKQLMGDASRKLKILAVHSSVYTKLQKDNLIQYIQATDANIQIPTYLGY
                     TLLVDDALAPEGDVYTSYLLGSGAFGRNTGHPEGLTTFETERKAAAGVDNVYTRRALT
                     MHPYGVRWQDNSIVGLTPSNAELATAENWKKVYEDKNIGIVAIRHKLAFSSEV"
     gene            25949..26275
                     /locus_tag="U1021_000216"
     CDS             25949..26275
                     /locus_tag="U1021_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710814.1"
                     /translation="MDKYITIDLFIDTDDDRVEYPIGALYPREGYTPSKERIDSLLSG
                     DNARGVPLIKQIIELPAKTTIPSDAENELTRDAVKEKLTQLGIEFNARAKTESLLELL
                     KTAEEE"
     gene            26310..26840
                     /locus_tag="U1021_000217"
     CDS             26310..26840
                     /locus_tag="U1021_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000587217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710815.1"
                     /translation="MIISLSEALIIHPKATQEMCDGLETMVRKVTNNHFQLEKFRLTH
                     LSLEGSTIKVDKGRLDIFREGDTVEINGTDFNDGLYVISGVSDGILSVNSTFIPESKK
                     GAILTKISYPADVIEGVKKLLSYDAKMTDKIGVKSESVARWSVTYYDVTASESQEGYP
                     AVLLGFLSKYKKIRWS"
     gene            26843..27142
                     /locus_tag="U1021_000218"
     CDS             26843..27142
                     /locus_tag="U1021_000218"
                     /inference="COORDINATES: protein motif:HMM:TIGR01563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head closure protein"
                     /protein_id="HEM4710816.1"
                     /translation="MEVALLKYRESGENALGQKVYDFVESEKMEGYLDMLTGNETDRA
                     TALTSSTHIFLTKQVDVQITTKDRIRAKGIDYEVSFVDNPVNLDHHLEIYLKVVA"
     gene            27142..27546
                     /locus_tag="U1021_000219"
     CDS             27142..27546
                     /locus_tag="U1021_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000673593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HEM4710817.1"
                     /translation="MKFIDNSAKAKEEIKYQAIRALKEICMMVEAQAILLAPSDTGNL
                     REHISHTVDRHELIGYVGTNVSYAIYVEFGTGEFAEKGNGRKGGWLYTTPDGKSYFTR
                     GNKPQPYLRPAFRKNKKQIQAIFETYLSQIGG"
     gene            27548..27934
                     /locus_tag="U1021_000220"
     CDS             27548..27934
                     /locus_tag="U1021_000220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710818.1"
                     /translation="MTPVIAKLTELFTEIVPEAYFLSNSNPTVAYPYLIFSYDAENRN
                     WGQDGAYVDVDIFDNKGEDQEQIEHLAFLLKRELGHRAVMSEECYIRFRFEGQGTIDT
                     MSDVLQRRNVRFYITIDWRNEDEKTS"
     gene            27918..28526
                     /locus_tag="U1021_000221"
     CDS             27918..28526
                     /locus_tag="U1021_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003055880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710819.1"
                     /translation="MKKPVKKTGYTKNTPKSYIVNAGAVYKNLTWNTETQKWEGELFG
                     ATSGGNKLTIEQNYRQIEVDGVFTAAVGQKVLESQGAKLEINAKELTAENIRMAINGV
                     IEQGDGQKVPATSKVITAKGELKKTDYITNLGLVGNLSGTNEPIIVILDNALCVSGLE
                     FETKDNDEAVITMTFEAHANEEQIDDLTLPCRIIYPTVDMEV"
     gene            28528..28950
                     /locus_tag="U1021_000222"
     CDS             28528..28950
                     /locus_tag="U1021_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008089371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710820.1"
                     /translation="MAEKLEMRELNGGDIFTMLGIIGKLDIKDEVVELLERQFNQPAI
                     VLQDHKKKQPTKAEKEAAELATEKRGMLLMTDIGFAILRHVGEAKNDVNSFLADLTGT
                     SRKDIESLSMLAYTGLLMDFAKKAELRDFFQSISSVLA"
     gene            29046..29276
                     /locus_tag="U1021_000223"
     CDS             29046..29276
                     /locus_tag="U1021_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710821.1"
                     /translation="MYLFDEEDKDVLKEIWLAKEVDMSLQSFIDKHSKKRYISKVNRK
                     QILESDIDSALKNAESILNMGYGKEVRLDGNL"
     gene            29263..31923
                     /locus_tag="U1021_000224"
     CDS             29263..31923
                     /locus_tag="U1021_000224"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PblA"
                     /protein_id="HEM4710822.1"
                     /translation="MEIFKLFGSIGLKNKEANQAIDETTGKAQTAGDKIKDTFGKVAT
                     FLGTVFAGKAIFDFGKSVVEAAATAKAVQAQFDQVFEGIRDVAENKLNDLAKTVGAVP
                     SRIKPAFNQIASFAKVAGMDASQSLEFTTRATEAAADSAAFYDKSLEETTETLKSYLK
                     GNFNVADNLGILSTETTRNAKATELFGQKYKDLDGIQQQEVLLRMFEDANKVSGAMGQ
                     AARESDGFENVMGNLKQTWEDFKVLVGGPLLQPVVAGLQLATKWIQDLGGKFQEFEPK
                     ITLFAEKLKDFTGFLKSNPAVLDGLKSAVVGLTAAWTSYKVITGVLRGIETARNTLLA
                     VGNGLMLARFTQSGALTVAEATQAAATMGATGAFSAFNAVLSLNPIMLVVGAIAALVA
                     GLVWFFTQTETGREMWSNFIEWAQNAWEGIGEFFSNLWQSITEGAINLWNGIVDTWNH
                     AVEIVKNVWSSISEFFTNLWADVQTTAIEAWNTFVQGVMMVVQPFIDTFMQYWTAMSD
                     GLSQMWEGVKMFFQGAWEFIKAIFMGAVLIILDIVTGNFGRLGADLDLIWESIKSAIT
                     MVWDGIKTYFSGVIDAIVAFGTTYFENFKNLLSAIWEGVKSAAQGAWDWIKTTVSNLI
                     TSLIDWARSTWDGFKNFLSSLWEGIKSTATNAWENLKQGVQNIIDGMVSGAKRAWDNL
                     KQSVSDLVSSVTSIFDNLRNIDLFAAGQAILDGFLGGLKSAWDNVTGFISGIADWIFE
                     NKGPIEYDRKLLIPAGNAIMEGLGGGLEDGFDDVQDGVLGMAGKLVQKVSSAAKHFKD
                     TVVPQMGDWSSSLDWYAKGEIISLPSMYDVSSSNLLEHSSDGQSNSLLQKIIELLQAL
                     LDKDSDVYLDLEKVGRMTYDEHGRIIERGG"
     gene            31927..32622
                     /locus_tag="U1021_000225"
     CDS             31927..32622
                     /locus_tag="U1021_000225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710823.1"
                     /translation="MLELKVDGISTKTIVECIVAGLGEDRTSSPRFIEETIYGMNGTN
                     RTIEAYDEVDRVLTFHCASLDAVRQLIKLFKGLDKKLEFWHIPNSFYYFDYKSSSYKI
                     NHKCSWDVSVKISLKPFRYLSEVEDVVLTQSGAITNMGDIFSEPRIEVFGNGQTSLTI
                     GNQVLRLNLDTKAVIECRHGYQNVYDKNGIIKNSIRTSGPFFEIPAQVTSGVVLGSGI
                     NRVVIRPRWRCEI"
     gene            32619..>34429
                     /locus_tag="U1021_000226"
     CDS             32619..>34429
                     /locus_tag="U1021_000226"
                     /inference="COORDINATES: protein motif:HMM:NF018329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM4710824.1"
                     /translation="MISLKDKNVLLVNAFDDEIEQEGNGKYQLSFKYPTSDQRWKNIE
                     LADLLLADDLHGEQEFRVFEIVKRNGYIFVYANQVVDDLNSYSISNISVDRVNGQTVM
                     QALAGSIIRKHPFAFYSDIQDRHVFNQKNISVMGALANGKHSIIGQWGGDLVRDKYNV
                     NLLKRGGRESEALFMYKKNLKSYAETNSIKGLFTRLNLSVKNSDIKTTVDSPLIGSYG
                     GRVYELNVEVADQDVATLEQLQEYGRNYFAEKLIDVPNNSLTISVTDSQEYDVRIFDT
                     VFVHHEIFDKDLRMKITSYRFSPMGRKLKSIGFGKIKTSLTQQVSNIATEVVEQSVSV
                     AGQVFEEKLQKGIENADKVIDGKINKVRDEINDGIEQSRAEAERHADNIKRSIDTEIT
                     QVNQSMQAQSEERDRQVADILSKTQSVESLANQAKSDAASALARANQVKTEAIADARA
                     QVATVNQALNTAKTELQSAIASADQKARDSQASATALRNDLNLQASKILAQAQAQTAL
                     TSRVTTVETLADGTRSTVAELSKTVSKATGDITSVTSRTKTVEDTLSQTRTQYEALTQ
                     TVNAQTGQIESINRKTADLQSGIDGVTERFESLRIED"
BASE COUNT        10987 a         5918 c         8024 g         9500 t
ORIGIN      
        1 caaatctata ttcaattgcc gataaaggag ggataagata tgcataaaat aaattggggc
       61 gtacgcttac gcaataagac attttggtgg acattgatac cgttgatagt actattggca
      121 caacaactag gttttaactg ggtgccgaaa gattgggaga ccacttttgg tacaatcatg
      181 tctatcttga ccgtggtcgg ggtcatcaac gacccgacga caaatggaat tgccgatagc
      241 gagcaagcac tacactatta tgagccgaag gtggatcgat gaaggctctt aaaattattt
      301 tttgtgtatc gacgttgatt atattggcgc cgattgcatt tttgctttta ccatttttgg
      361 aggtattaaa tgacaacagt aaatgaagta gttaattttg ccaaagacct agccaaccgt
      421 ggtcaaggcg tagactatga tggttggtac ggtaagcagt gtgtagacct acctaactgg
      481 atcagtggca aattttttgg caaagctctt tggggcaatg ccattgattt gattaaatca
      541 gccaagcaac acggattcga ggtgcattat atgcctacct ctgagagtcc gcgtccggga
      601 gctattttcg tcaaaaacta ctgggcaggt gacggtatca actatgggca tactggtctg
      661 attatcggag tcagtggcaa tactgtccaa actattgagc agaacctagt tggtaatctg
      721 tctgtcggtg gtcctgctca gtattctagt cagcaaatca gcaatcttgt tggctggttt
      781 tatccacctt acagcgactc tactacagtg gcaacacagg caagcagtgg caatcttggt
      841 aagattaaag acgagaaggg gacaatgacc gttaaagtat ctttgctcaa tgtccgagac
      901 aagcctggtt tagacggtaa agttgtggca acgtacacga atggcgagca gtttaattat
      961 gattcggtct atattgccga tggatacatt tgggtatcgt atgttagccg tagcggtgta
     1021 cgtcgctatg tagcagcagg cgaggagtca aatcgacgca atgtcgtgcc ttacggtatt
     1081 ttcaaataaa tttttaaccc agcggtctgc tgggctttta tttgcgaaga tttttcttga
     1141 caagttatga taagttgtga aataatgtac gtggttaaga aaatagatga aattccgttc
     1201 atcacctcct ttctaaccat ctcggcttta tctgtggtga cacagacata tagtgaagcg
     1261 ctctatatgg cttggcagag ctttaaaact gttccctggt gataagccta agaagcacta
     1321 aggggagtta gtgactcgcc accactaatc gttaacctgg gcaagggttg aaacttgctc
     1381 agcgcttttt tatttttata atggagtctt gtgtggaatt aagagaactt gttaaagatt
     1441 atcggaaaaa ttttgtcgga aaatcatgcc aagtttccac taattatagt gacttaacaa
     1501 acctcattgt acattttcaa gcgacggatt tgcaccatct tttcggtttg cacaaaataa
     1561 caagtgacta tgctagtcgg acgttgtcgc agattgaaag cggaaaattt aatttgtccg
     1621 attttaagag tttgccaagt tatagagaag taactcgcag agttacctta tacccattta
     1681 tcgccgaaat ttttatgaag caggcgacgg aatattgcgt cattagaaaa gatttgtcaa
     1741 agaatagcat gaatcttgac ttggttttct ttgagggaga taatcgtaat gtaaaggttt
     1801 taggcttaag aagagataag agcggatttt atagattggt tacactccat gaatcttcag
     1861 ctagaaaata tactagagtt agaaaaacaa aaataacaga tatagtttgg ttgtagcccc
     1921 tcagcgtttg ctgggggctt ttttgttgct gaatttcaaa aaaatagcgt tttttcaaaa
     1981 tttgatagaa aaatacttac ttttatctcg gacgttttta aaaattgccg tttttgcgga
     2041 caaaaaaaga ccttgtccag aggtcttgag aagttgattt atggagtgtt tttttagtgc
     2101 gtctgcccca aatccgcccc aaatttttcc attaaatttc tgactttgtc gaatgattgc
     2161 tcttgttttg ctttgaataa gtgagaatat gtttttaatg tctcggttgc atccttgtga
     2221 cctactaact tggcaatggt cacaacgtcc acatcatgat agattagcca actaacgtag
     2281 gtatgacgta agccatggac attaaatgtt tgacgtgtct ttttctttaa aattttattt
     2341 tctccagtcc ccgtcaattt ggtaaataat cttttatctg gattgtctat atatccaact
     2401 ttcatgtact cgtcgtatgc tttcagccac tcgctgtcaa atggcacatc tcgttctgat
     2461 tgaggattct tagtaggccc ccaacctttc ttctttccgt aaactttgta agtcctgtag
     2521 attcgtaaac acatattttc gcggtcaacg ataggttctg taatgccagc cgcttccgaa
     2581 aatcgcagac ctgtcttccc gaccgtgtac aggaagaagt gggactggta cttgattgtc
     2641 tttcgataat ctgtgattaa ctgttcgtat tcatctagct ctatgtattt atcttcttct
     2701 cttttggact tgacatcaga gaaaatcttg acgatttcgg taaaatcttt ttttaaaatc
     2761 ccttgatgga tagcaacttt aatagatgct ctgatgtgtg aattaaatct ttttacacta
     2821 tctttcacaa agttggttgc gagttcgttg atgacatttt gataagatgt ggcgtttatt
     2881 ttcgatagct ttgcgtcacg gaaatattta gtaataagtt tatgagtgta ttcgtactta
     2941 ccaagcgttt ctggtccaac gtgaggcttc ttgtggacaa gcatccattt ctcgaagtac
     3001 ccagcaaggg taatgttctt gtcttccaca atgccactgg atagttctat ttcagcctgt
     3061 gatgccgcct gaaccgcgtc agacttagtt ctgtaccctg actttgattt ttgtttatat
     3121 gagccgtcta gggctttata tgagatacgg tattcccagc cattctctcg ttttctaaaa
     3181 tatgccattg atttaccctt tccaatttga tataatgggt atagtaaaga gacctactgc
     3241 aaagaaggtt tctgaactat atcagatacc ccacactctc cgccggcaag cttgagtgtg
     3301 ggggtttttg tttgtttttt tgagggagaa ttcatagaaa aaacctctgc tcgatgaaca
     3361 gaggtttcaa attgtcctca agggacgaga tcatttattt tgtcgtctag cgaccttatg
     3421 attcaattgt aacctttgtt cttatttttg tcaacagata ttataaaata tttttgagtg
     3481 catcgtcgat tatgtcaaga gtttcggcag acaaggttat atctgtcagc aaagatttct
     3541 tgttaattgg gtccaacagt cttaatttgc tgattgttgt tacttggttc aaaagagcaa
     3601 tacttcccat ttttaaattt ttgattttgt taatcaattt ttcaagatat tctgattgtg
     3661 cagtcatatc tctgacgatt ttatctatct cttgttgctc agaagtcaca atggatagtt
     3721 cgttctcgaa gtattcttca aatcttgggt ttaaatcctc tgaaactacc tgatctttta
     3781 atattgactt gagttcggcg attttctgat ctattttttc ttgcttttct tcaaaaataa
     3841 tctttttttc agcgattaac ttgatattat tctgtgcttt ctgaataagc aatcgatgga
     3901 tttcattaga taatgataat tggtagtatt taagattgtc tacatctgtt gtttctttta
     3961 ttgaagtaag cggaagaata tgtaagaggg tgttatttcg tgaatctttc ttgtttaaca
     4021 caatggcgta gtgaatgccg ccgtattcgg tgccaacatt gaaacctaaa tctacgtaaa
     4081 caatgctacc gcgtttaaaa gcagggatac ttctaggatt gaatttcttt tcctgtttca
     4141 aatattttgt ccaagactca acccattgac tgattttgtc tgctcgagca tcatccggat
     4201 caccattctt agtcaaatga tgaagatact cctctaattc tgtaatcgtt tgtgcgacat
     4261 aaagcgcaat ttcgtcattt gttctgccgc tagccatctg tttctccttt caattaacta
     4321 aatttaaaca ttcttccatc accatggtct cgttgaccgt ggtttttaag tttccctata
     4381 cacatccact acctcaccga taattcggaa gtcgctatct ttgtctatct tgatgtcgtt
     4441 gtatttttca ttcaagctgt gcaggaaggc tccgtcttca ttgatgatta gttgtttgat
     4501 ataggcgtct ccgtaatatt cgaatactcc gatgtcgccg tctgataggt ccacagagag
     4561 tttgacaaat atataatcgc ccgattggta ttctggttcc atggagtctc cgtagatagg
     4621 gacaacgaag tcggcttcca cttcaatagg taattcgatt gtttcaacct ttacatcatt
     4681 cagatactga cctgtgccag cggaagcggg ttggtcgtag tagttgtagg tgtggtaggt
     4741 ggcttgcagt tcgtttactg tattttcttt ttcctgttcg cttaacaaac gttctccgtg
     4801 gcttatccat gcgctgtgac gtggctcttt aagttcttgg tctaaatatg ccaccttgtc
     4861 cgaaatctgc tctacgaggc tgttaggggc tgtggtgggg gtgtaggatt taccaaacat
     4921 cataatttgc ggatcaattc caaagaaatt tgccaattct tcaatttcct gtattttggg
     4981 agaacgtgtt cctttttccc actttgaaat ggttgatttt gtttttccta tcttttctgc
     5041 taactgttcc atggtgagag agcttgctgt tctgtattgt ttaaccattg caggaaaagc
     5101 aatttgagta tccatactgt gtcctccttt ttttcttcat tatataatca tgtttacatt
     5161 ttgtcaacaa aaacgataac aagatatttt caaaaaagtt gactttttta acacaaaagt
     5221 gttgacaaaa aggaaacaaa gtcgtatact ataatcaagg ttaaggaatt aaccccacca
     5281 aaactaaaaa aacaggaggt acagccaatg gcaagacacg aaaaaaagcc taaacgcaga
     5341 gaaatcgaat ttgacattca attcttctgg tttagacttc gagtaaaata cttaatcgag
     5401 tggtagcttg attaagtagg ggggcaggag cctccctccc tcgtaagagg gataggtata
     5461 gtgtaccaca ttggctgtac ttcctgcaag gagtatctta tgagttggaa aaaaattctc
     5521 tttggtagtt atgaaaagac ctttgtcagt caggatggca gggcaaagac gactatctct
     5581 atcaagggtg gattgttgct taatctgttg gcactggtcg ggctggttgg cttgatttgg
     5641 tggctgattg gtctatttac atagaaagga gtgatggtta ttgacagaaa ccgcatttga
     5701 aaaactactc aacgatagcg gtatgaaaag aaatgtcatt gcagaacgca tgggcttaac
     5761 tcgttctgga ttttacagaa aacagaaaaa gcctaaagag cgttttgatg gtgatgaaat
     5821 ggccaaacta gctgaggtaa tcggtgtaga tcctcagaag gtcttagcgg ccattttaat
     5881 ttcataacga agttgacaaa aataacacaa acacaccagc tctgctattt cccaaatggt
     5941 cagtctttgg tcaaacttta tacaatactt gtataaaaag ttcttgactt cttcaagaac
     6001 tttaactaac aggtggaagg aggggtgacc atgacgtcta tacatgtgtc tttgtcggtt
     6061 gagatgaaga agcggttggg ggtggagtgc cagcgtctgg ggctgtcgat ggcggcttat
     6121 gtgcggttgg tgctggcgga gaagttgaga gaggagtagg gcggtacagc tctgctattt
     6181 acggaaagga ggaggacatg tcaaaacaaa gatacggtcg cccaagtaca gggcagaaag
     6241 ggaataaccg tcccacagtg gtcattagtc gtgagaacta cgacgaggta gacaacttat
     6301 caattggtac aggaatgagc cgtagtgcta ttattgatta ttttatcagc gagggcttga
     6361 aacgtgctcg tattgaagaa gttgtcatca agactaagcg tctagttctt gaggactaga
     6421 aaggagaaat aagatggaag aaaaacaaac atttgctaca gcggtgaatg aatacgctaa
     6481 agaagtattt gaaaaagcgg ataaaaaaga ccctgcgtct gttgcagcag tcgcagagtt
     6541 aattaaagca atgaaaggga ttttttatta gtaaacccat tcagttggaa tatatggtct
     6601 tacagtaatg acttgatcta agttgagcag aaaacttgtt ttatcttttc gttcaacgac
     6661 ttcaatcaaa ttgtcataac ctttgtgttc gttagcaact tctatcacaa ttactgtctg
     6721 accgtcactc aatgttagtg ctaaaatttg tttttgttct agcatatcaa caatgtattt
     6781 tttcataata ttacctcctt tctgtgttta ttatagcacg gaaagagagc aaccaaacta
     6841 gaaaggagaa agggatggaa ctaggcaaac gaataaaggt tatcagagta agcctaggcg
     6901 aaacgatgga acaattcgga caacgtttca acacttccaa aggtacggta aataattggg
     6961 aaaaaggcag aaacgcaccc aataaggcta atttgaaaaa gattgctgat ttatcagaca
     7021 acccaaggga gtttgtaacg ttgtatctta cacgaatata aaaacacaaa aaagcccctt
     7081 gacgaagtca ggagcttacc aaaaaaatca cttaaattat aacacacgaa agcgaggttt
     7141 gacaagatgg atgctatgtt ggaagcgttc gaagtcttga agcaagaaat tgtccaagaa
     7201 gtcttgagcg aggttcggaa agagcttgct atcgagagaa aaccctctca gatgtccgat
     7261 aaagccattg gtgtgaagga agcttgtgaa atcatgggaa tgagccgtaa tccgtttatg
     7321 gcaattgtga aggctgggaa aatcccttat cacatggctg gaactcattt ccgttttgac
     7381 caaagagata ttgaatatta caaagcaaag atgaaagtaa agaaaaaagt gaagggattg
     7441 agtgcatgac agaagcaatt ttaacattag ggattttcgc tgtgccgatg ttggcagtag
     7501 gcattgtgga gcaacggaag gctgagaaaa agcggatgtg tgaagaattt gaagaaattc
     7561 ggcgcagaga ctacctgtac ggctttaaag caggtatggg gtatcagagt acctgcgaca
     7621 ttgaaaaagc tcgtaacggg ctaaagagag acgctcagca agtggatagg gagtggaaaa
     7681 gatatgcaga aatggttggc taatttttta aaacaagaaa aacctgctat cccacgtccg
     7741 ctttacacac tagaacagga aaatcaacta ttgcacgaca tggtccgtga aattgctgaa
     7801 caacggaacg aataccgtat cgaaaatcag cggttaaggg atgagaatga acggttgagg
     7861 aggattttgg aatatgacag cgattgataa cacgcttcgg cgaggaattg ttgaagttta
     7921 ggaggtttgg atagtgcaat atatctttca gaaatacaca tgagaattat acgtctataa
     7981 acaatgcttg tttgcaagat gaaaggttag aaccagccac aattggcatg ttagcggtaa
     8041 ttttatcgaa caaacctgat tgggttgtat atcctgagga aatagcaaaa agaatgggag
     8101 ttagcagaca gtttgttaac aagcatttca aaatactaga agaagctggc tacctatttg
     8161 tgattaaaaa aggcggtggt cgagctaaag gagtaactcc ttttcgattt tttaacgaca
     8221 aacctttcac tgataaattt aaggaatata tccagcagaa actagacgaa gagttatcca
     8281 caggtaataa cgttcaatga tttacaactg ttaagtttta cacttttgta aaatacaaca
     8341 gttgaaagtt acatttttgt aaaatacaac agttgtatct gtgccactaa taaatactaa
     8401 ctatataaca agtactaacc ttaataataa tctaggggct atcgcccact aataaacaat
     8461 aagaggctaa agcctctaac taacttaaaa acaaactaat cgttatatat aaataatata
     8521 tatagggatt tacagaagtt atccacagga ggaaaatcat gaaacaaaat aacacattta
     8581 tcgtattgcg agataaagaa gggaactact tagctgggtt cgaaaacaat ccacaggttt
     8641 tggcatattc ggcagattgg gttagtgcta ttaacgaggc tttgacaatc ccggaaaagt
     8701 acttttatgg tgaggataat gagcaatact tagcaatgac aaagatgttc gatgctgaac
     8761 taataaaggt gcaggcagaa tataccttga caactttgga cgggcaagag ccagctgaac
     8821 cagtcaaaga tgctgatgat acagttggaa cgtttttttg aaaaaatgct ttctgatatt
     8881 ttgggagaag actaataagt gtcaggttgt ttaggaggtc gctatgaaat tgagagagcg
     8941 tgaaaatctt gtctggcaac gtgccacggc aggagagaag gaaaagttac tggatacagg
     9001 tctagctgat aaagcagggt atatccgcct tgtcagagag ctaggtagaa agtatgtggc
     9061 ctaggaggtg cgacatggac ggtacttacc catggtttga ctatgaccgt gactatctac
     9121 aacctgagga accgagacag gtgcatgatc ctgatgaatg ggtgttcaga ggcggtcaat
     9181 ggatttatgt aggggatgca taacgacaga ggaattacta gatacaatcc gacggctgag
     9241 gtgtgattat ttccacctgg gccgagagct gggcaagatt atcaacgaac aacaggactt
     9301 gatacttgcc ctgaaacgag aaaataaacg cttagagcgt gaatattgga atttgaaaca
     9361 gacgaagagg agaaggaaat gacaacaaat caagtagtaa cacacaaaaa cttttttaat
     9421 gccccaaacg ttcaaaaatc gtttgatgac gtttggaaag gcgcaggggt acaattcgca
     9481 acaagtatct tgtctgttat ccaaggcaat gcatcactaa aatctgcatc aaacgaatca
     9541 attatgacat cagctatgaa agcagcggta ttaaacttgc cgattgaacc aagcctaggt
     9601 cgtgcttatc tagtaccata caaaggacaa gtacaatttc agctaggcta taaaggtttg
     9661 attgaactgg cgcaacgaag tggcaagtac aagagtatca atgcaggtcc ggtttacaag
     9721 agccagcttg tatcttatga cccattgttt gaagaactga ctcttgactt tactcaacca
     9781 caagatgagg ttgtaggata tttcgcaagt tttagtttgt taaatggctt ccgtaaactg
     9841 acctattgga caaaagctga agttgaagcg cacggcaaga agttttctaa aactttcggc
     9901 aacggacctt ggaaaacaga ttttgatgca atggcacgca agacggtgtt gaagcatatc
     9961 ttgagcatct atggcccttt gtcagtggaa atgcagacag gaatgcagag tgatgaaagt
    10021 gagaataaca acacgtcaag agatattaag aatgccgagc cagttcaatc agccgggcag
    10081 gatatcctgg ataagatgac cggcaagatt gttgctgaag aacctgcaaa agatgtaacc
    10141 atttccgaag tggaagctgt tgaagaagta ggagtggata tttccaaaat ggaaacaacc
    10201 gagcaggtca ttgatgccga aaccggcgaa atcttagatg aggaggagcc gttctaatgt
    10261 ctgaagaact atctctattt gacaatctgg aaagtatggc accagttccg acagcgacag
    10321 tattagattt tgactttgaa ttcacaccag cccaaatcac tatcgtgggc aaggatttgt
    10381 tggagcaggc acttactgga tacgttgaaa aatacaagaa ttacaccgtc acggcagaaa
    10441 catttgaaga cgatgccaag gtccgagctg agttaaacaa cctgcagaag aaggtcaagt
    10501 cagctgttaa agaaaaattg gcagattaca acaagcccat cgacgaggtc aaggcttggg
    10561 tggacggctt gttggaacct attgccaaaa tcggtaagtc gattgatgaa ggtgtgaagg
    10621 cgtttgaaga acaggaacga cttaaacgcg ccaaaaccat tgaggaacta ttccaggaag
    10681 ctattgcgaa cacaggaaaa gatattgaca tccgtttgtt cagcaagtat tttgatgagt
    10741 tttctaagaa gacgtgcttt atggctgaca atgttcgtcc caataaagcc acagtcaata
    10801 tggttgccag cttggtagag gaagaagtgg ccaagaagga agaatatgag tcagcactaa
    10861 tcaaaattac tgaagcagct gccaaagcag actttggtcc agccccttac gtacgtaatt
    10921 ttgaacaagg agcaagcttg gctgacatct tacaggcaat cgctgatgac aaggctctgg
    10981 cagatagaac ccgtgaggag gttaggcgca agcaacaact ggcaaaacgg attgaagagc
    11041 tgactgctat cgcagagagt aaaggtctga acccgaagaa gtatgccgat atgctcgaat
    11101 caggggtatc tgcactagcc gtccacgaag aacttgtcaa tgacgcaaga aaatggcaag
    11161 aagagcagga ccgaatggaa caggaattct tagctcaaca tggagctatt tgtggaaatg
    11221 ctcaaaatcg cccaaattct gacgaaattc aacgagaaaa tgcgtcagag ggtaaatata
    11281 cctccgaaca gaaaaacgcg tcagaggata aaatagagct gaataagaag gtggtcaaat
    11341 ggcaaggtga tttcagaatt actttcccag acggagagac cgctaagtta ttcggtggtc
    11401 caggtggttt gtatgaacaa catgggatag ttgttgagaa attaggggag tggacgaaaa
    11461 taaatgacta aactaactga ggagaattac tatcaagacc gtcaatggct ttcaaattct
    11521 cgctttaagg cttatatgga ctgcgaagcg aaagctaaag ccattgatga caaggagtgg
    11581 acggacaagc gtgatgatac tgccttgctc gtcggcaatt atgtgcatag ttatttcgag
    11641 agcgaagaag ctcacgccaa ttttattgac accaacaaaa ctaggatgat ttcgagccgt
    11701 ggagcgacta agggcgaact gaagaaagag ttccaagttg ctcagaacat gatagatgct
    11761 ctgaaagatg acaaagattt cttgcctctc tatcacggca acccaggcga cgatgtccgc
    11821 aaggagatga ttttagaagg cgaaattttc ggtatcaagg tcaagggtaa ggtggatagt
    11881 atcaacttga ctgaaggcta ttttgtagac ctgaaaacta tgaagactat ccgtggtctt
    11941 gaatggtctg acgtggaacg aaagaaaatg cctggagctg ctgctaacat tttaggtttt
    12001 cgctacgatg tccagctggg gctgtatcag gaattgttgc gacaaatggg ctatccaaat
    12061 ttcgttccgt tcgttgtagc tgtcagtaaa gaagatgtgc ctgataaaat gcttgtcgat
    12121 ttaccgcaat atcgcttgga tgaaggtctg caattcttcg aaaataacgt cgaacgtgtt
    12181 gcgggtatta ttgcaggcga aatcaagccg aaaggttgcg gaaattgtga ctactgccgc
    12241 agcaagcgaa ccctggaccg tgtaatcaat ctggatgatt taatcgcggg gatattttag
    12301 aaaggcgctt taaatgacaa attttgctga aaaaatgaaa cagttgaagg aagaatctat
    12361 agctgaattt tctctggtag ctggaacaat tggtgaagct agagagttgc tcgaattggt
    12421 caaaagtaac ggcatcaaat ggttcagcgg agaaccaatt gaacatatgt ctgaatatat
    12481 ttataaaaaa atgcaaacat acccagaaaa aagatttgtc ctaaatttcc gaaatggttt
    12541 caacctgaag aaacaattga caatcttttg tacctgggaa cacagataac gtgccgtgaa
    12601 ccacgaaaaa agcgaactag aaagcgtgtc aattggaaac aatcagttga cagttggacg
    12661 atagcgactg cccgtattta gccaaactca cacaatggca gtcgctggat tttagaggtg
    12721 aatatcatgt caacaattaa aaaaatggga gaaaatgacc caaaaatcag atattaaaga
    12781 cctagctaaa aagctcgggg tatagcgttt taatagccgt agtaaaaatg ctctttgaaa
    12841 atttaataaa aacacttgac tttatggtaa cacaatatta taattgttgt gttaccaaga
    12901 aagagaggtg aagcatggta gcaaagctag gaagacctaa aagcgaaaat cctagacatc
    12961 acaatacccg aattcgaatg actgatgatg aattaacaat gcttgagtat tgttcaaaag
    13021 tcactggaaa aactaagacg gatattttaa tgttagggct tgaaaaagtc tataagagta
    13081 taaaaaaata gcgtacaacc cgccatcgcc aaactttggg tcgtacacta tcgccacaga
    13141 aagtgtttct gcatgaaata ttatatcatg caagacactt cttttcaaga tgcacaaaag
    13201 gagtgttttt attatggcta aaaataaaga attagaagag attatcaacc acatccacct
    13261 tgcttttcgt gaaagcgaga agtcggcaga acttatgcag tgggataatc tcatctcgat
    13321 tgttatcaat cgtgattttg atgaaaagaa agcaagtgta ttcttcgagg ctcacgcttg
    13381 cttattacat acatttgcta atgagttaat tgaatttgtt ttagattatt ttgtagaaga
    13441 agaggagaac taatatggaa ttgcaaattt ttaagaatga acagtttgga gaagtgcgta
    13501 cagcggacat caagggagag gtttatttca acctaaacga ctgttgtaaa attttagaat
    13561 tgagcaaccc acggaaaacg ctcgaacgac ttaatccaaa gggtgtaact actagtgaca
    13621 cccttacagc tggaggtatc caacaagcca actttatcaa cgaaagcaat ttctacaagt
    13681 tggttttcca atctcgtaaa ccagaggctg aaaaattcgc cgattgggtc acatcggaag
    13741 ttttgccaag tattcgcaaa aatggggcgt atgtcactaa tcaaaaagct gttgagatta
    13801 tgtctaaccc aaatgctctt ggtgagttct tgcaaggaat tgctaaccaa gtgaaacaat
    13861 tagaattgca gaattcaaat ctagttgaga agaatgaggt tctagaggtg gaactgcttg
    13921 aggctcgcaa gcaagctcgc tacctagatg tgatcatcga gagcaaagga gcggttcgtg
    13981 tgacacagat tgctgctgac tatggtatga gtgctaatca attcaataaa ctcttgcatg
    14041 agttgggtgt tcagcataag gtcaacggac aatggatttt gtacaaaaag tatatgggca
    14101 aaggatatac cgatagcacg acatttgatt atctggacaa gaacggtcag gctagagcca
    14161 atatgacaac aacttggacg cagaaggggc gtttgttctt gtatgagtta ctaaaaaata
    14221 acgacatctt gccattgatc gaacaagatg aagtagcata gtgatagtca catgaaattt
    14281 gaaataccta tcgaacctaa accgcagagt cgtccaagag ctggaaggcg attaggtcgg
    14341 acaagagttt atgaagatga caaaatgacg gcttggcgtg ataaatgtac agcacttgtt
    14401 gcacaacttt ataaaggccc gtattttgat aaggctatca aggtcgaggc gacattctac
    14461 atgtctgcgc ctaagtcaat atctgagcca cccaaaccta agtccaaagc taagaaagtg
    14521 caacagtatg atgactttat caatgagcga atttatgtag atataaaacc agatctagat
    14581 aatctggaaa aagcggtcta tgacagcatc agcaaggctg gcaatgtttg gacggatgat
    14641 aacatcattg tcgagcatac aacgagaaag gtgtacagtc ctagaccgag gattgaaatt
    14701 aaagtggagg aagttttatg acacaaatga tttatgcttg tacttgtcct gaatgtgagg
    14761 gacaagaaga acaatttaac aacgtaacca aaccaaaaca ttaccaaggt aagtatggta
    14821 tggaagcttt ggatgtggtc aagaatttta tcggcaatct agccggcgaa tctgcttact
    14881 actggggcaa tgtcatcaag tatctgttgc gatttcagca gaagaacggt gtcgaggact
    14941 tgaagaaagc tagacaacat ttggattggt tgattgagga gatggaggaa agtaatgaaa
    15001 ataataagtg atatgaaaag actattttgt aaacattctt ggaaggaatt accgcgcttt
    15061 atcgcgttga atactgggaa aatttctcct aaacgtcaat gcctaaaatg tgggaaagcg
    15121 gaggaaacgg atgaataaaa caattgaaaa cgtaaagata accaaaactt tcttgggcag
    15181 agaagaccat ggaattttaa cttgttatct gactgttgag ggagatggat ttggggtatc
    15241 tattggagga tactgcctag ataaatacga cgaaaacaag cggaagcgtg tagcttatca
    15301 taagagcttt gagctgattg accgtatctt ggaagttgtc ggtgtgtcaa cttgggaaga
    15361 actgcaaggt aagtatatac gtgttaagag taacggtttt ggaggtagag taacgaagat
    15421 tggaaatctt attaaagatg attggttgga ctttgatacc tttttcaagg aggaaacaga
    15481 tgaataaaca ggaagcgata gagattattg agcaatcaaa aataaaaata gctaacagag
    15541 ggagggtaat atttaaagca ggcgaaatta tagtagaaaa tgtacaggtc gattatgtac
    15601 cacttgaagt tgttgtgaac acgattgacc aaatccatga accacagaag gttgtggtgc
    15661 cgaagtttat cgctgatagt atcgaatatt gcaaaaatga agaagggtat ggattgctcc
    15721 gtgcaatgga ttactgcgat gaatacaatg atactggcga atggttagag cacaaccaag
    15781 agactttcgc cctagcgtgg cttttcggct atgagattga gcaggagaaa ctgtatacgg
    15841 tggagttgtt taatgggcaa ccacttgtag aagaaaagaa tattttgtat ttcagttcgg
    15901 acttggccgc ttcaaatgcc catgtgggta aagacaagct tgaagcagct ggctttggtt
    15961 gggtgtttga ttgcaacggt gtgaaggtcg tggaggtaaa aaatgattaa gaaatatcat
    16021 cgagttaaat gcgaactaca tggatggcta aattgccatt atgattatga ccaagataaa
    16081 tattcgactg ccgaagctat tagcgatttt atttattcga taattgatga ttttaaagta
    16141 aaagcaaaag atgtcacggt tgaaacagtt gaacggtcgg aggtggagtg atgaaacaat
    16201 tattaaggtc tgttggattt atactgatat tttattcggt tgcccctaac atcatccacg
    16261 agatgacgct tgctcagaag ataatgtttg gattaggcgc tagttggcta ttttatgaag
    16321 gaggcagaaa atgataccga agtttagggc atataaccca gcaactaaca actggtataa
    16381 ctcagatgaa gttttcgttt gtgatggaaa aatttatctt aacgatgatg atttcgagga
    16441 tttgatacaa aataacgatg tcgaactcat gcaatccaca gggctgtttg atatcaacgg
    16501 caaagagatt ttcgaagggg atattgttag aatgcactca ggagagcttt taccagtaaa
    16561 gctacaccac ggtatgttcg agcccgtttg ctattacgcc agccgtgcct ttggaagggt
    16621 tgggaatgtt tttgaaaatc ctgagttgtt agaacatcca gattttaggg aggtaaacaa
    16681 tgagtaacga aaaactaggt gtgctactgg ttgatgtacc agatataatg ttttttaaat
    16741 acaactacat tatagacaca gaagaagttg gcgcgagtac atttattata aatggaacag
    16801 attttttaga aaaattagag aggttagcct acaaatgcac ccaagaagaa gctaaaaaat
    16861 acccacagtt taagtgggtg gcgttggagg aattggtatg actattaaag aactaatcaa
    16921 tgaattgcag atgtacgacg aggacaaaga ggttgtttta acgatagcca acgtgcatcc
    16981 agttttgcac gaattaatag atttggaaac tgggttggtt cgtctttcgt cggattgtca
    17041 aatcggcttt gaattcaatc ttttatcaga caatcgtctg gaaattgagg gggtgtggta
    17101 gatgactaca gcagataaaa tcaaacacat cctgcaaaag acagggtgga cgagagagca
    17161 atttgcgtcc gagatgggtg tgacgactct atctgtctac aaatggctag acggacgacc
    17221 accgcggcaa cgcatgttgg ataaaataga cgagctgtac gagcaagtca agccttatga
    17281 gcctagggcg ctagctccga gagggaaaat tcgactggtg tacccgtatt atagccatca
    17341 gcgacagccg tgggaaaaat aaaaaagcca aggcactctc tgccctggct gtggtaaata
    17401 actcacatac attataccgc aaaaaggaga cagagagtga acaaggctaa ggctatatta
    17461 aaagatttga gaaatttaga tttgtacatt gctagcttga ttagacgtcg tgaaaaaatc
    17521 gaagcctcct tactatctag tccaaagtgg acagcggata aagtttcggg cggagcgaaa
    17581 aagaagcagg atgatgtcta tgttgaattg atggcaaccg ctgatgatat agaaaagaaa
    17641 actgctgaag ccattaagaa acaacgtgaa ctacaaaata taatagacaa tttaaatgat
    17701 gacaccagca aaacaattct aagcctggtt tacattgaca agatgtctat gtatgatgtg
    17761 atggacgaaa tgagaattag tgacaggact tattacagat tgctaaggat tgccaggaaa
    17821 gaattggagc aagtttggca gtaaatggca gtttttggca gtaattgtca gtgcatggca
    17881 gttttaatct gctagaatgg tagtatcaag aaataagggt aaggcagtaa gccttccctg
    17941 acatggagag ttggcagagt tggtcgaatg cgcccgtttg ctagacgggt ggccgcctac
    18001 gtgcggtccg tgggttcgaa tcccacactc tcctttgagt gtttgtgtcc cagaatgggg
    18061 taagtcgttg gacgagaatt catatatcac tcattaactt tgaaatggtt gcggatgcga
    18121 ctaggccctg catgattgca cagctactta tatcctaggt aagttataag ctgggtggtt
    18181 tgattccgct aggggtcttt ctcctatatt tttcccacac aatcgtgtgg cttttttaat
    18241 tttgagtgga ggtgatagaa aatcgcgaag agaagagaaa tggttgatga atttggtctg
    18301 aatagtcgtg agcgcaattt tgcagatgag tacatcgcta atggtaataa tgcaacgcag
    18361 gcttatttaa aaatatatcc aacctctgga gaagctaatg ctgctaacaa aggcagtgca
    18421 tgggttagaa aaggtgagat tttgaactat atcaaaatca aaaccaaaga aagacttgat
    18481 gcttcagggc tgaaatcaag cgatattatc gatcgtctta ttgatatcgc ttttgggcgt
    18541 ccaattatcg gatatagcaa gcagacagat aaattgactg gcgaggtcat taagcacatt
    18601 gaatatgaga gcactgctcc tattgatgag cagattaaag cgcttgaatt gctaggtaag
    18661 tatctcaaat tatttactga caaagtcgaa gctgaggtaa acggaacggt ggtgtttgct
    18721 aatgaagcag acatcccaga ttaacgttga tttgccaaag attgtcggta agggttatgg
    18781 tcagttttgg cggtctagga atttttacag agtcgtcaaa ggcagccgcg ggagtaaaaa
    18841 gtcgaaaaca accgctttga acttcgtagt caatctgctg aagtgcccat gggctaatct
    18901 acttgtcgtg cgtcgctact cgaataccaa taagcaatca acttatacgg attttaaatg
    18961 ggcctgtaac cagcttaaag ttagtcataa gtttaagttt aacgagagtc tgccagagat
    19021 aacagttaag gctacaggtc agaaaatcct ctttcgaggt ttggacgatg agttgaagat
    19081 tacatctatc acggttgatg taggctctct ttgctgggct tggtttgaag aagcctacca
    19141 gattgagact gaagataaat tctcgacggt cgttgaatca atccgtggta gcttacaaga
    19201 tacttcggca tttgctttca atcgactaga cggtacatat ggaaacgtgc cgttttacaa
    19261 acaaatcacg gtcacgttta acccgtggaa cgaacgtcat tggcttaaaa aggtattttt
    19321 tgatgaagat accaaacggt cagatactct ggctttgaca actactttta gatgcaatga
    19381 atggctagat gaggttgata ttaagcgata tgaggacctt tatatcacta atccacggcg
    19441 ggctcgcatt gtctgtgatg gtgagtgggg agttgccgaa ggtttagtat atgaaaatgt
    19501 ccaggttgcc gattttgaca aagagtcgtt attgcaatct gggaattaca agctgtgcgt
    19561 cggacttgac tttggtttca cgcacgaccc gaccgctctt gtagcttacc tcgtagatga
    19621 taaaaataaa aacatctatg tctttgatga gcattatcaa gtcggtttat ttactaagga
    19681 tattgcagag atgataaaga acaaaggata tgccagtagt cagattgtcg cagattgtgc
    19741 ggaagctcga cttatcgaag aattgaaatc ggagcatgga atccgcagga ttaaggcaag
    19801 tcgcaaaggt aaggatagtg ttatggctgg tgtgtccaaa ttgcaaggat acaagatagt
    19861 agtacatccg tcttgtacac atatcatgga cgaattctac tcatattgct accagcaaga
    19921 caaggaaggc aagtggttga ataaaccaga ggataagaat aaccacctta tggacgcact
    19981 gcgatatggt ctgcaatgtg cagagcgcaa agaatggctc tattagaaag ggaagtatgt
    20041 tagatgtgaa agatatatcc caagttgaac gagggataaa aaagttaatc gacaatgacc
    20101 tcactgacca aagcaaagag aagatgcgga cagctttgga ttactacaga ggtaagcatg
    20161 atattttgga ttatagactg tactatattg atgatattgg tcaaccaaaa gaagaaaaat
    20221 acagaagtaa tacaaaaata gctcatggtt ttttcacgga gctagttgac cagaaagtcc
    20281 agtatttatt gtcaaatcct atcgagattc agacggaaca acaagagcta caggaatact
    20341 tagctgaata tgtcaatgaa gaatttcagc tagtcttgca ggaattagta gaaggggcta
    20401 gtcaaaaggc tgttgagtat gttttttggc gaatagataa agatgggcgt ttggtttttg
    20461 aggtagctga tgccttgaaa gtgattccta tctacaatca cgacaatcag atggaacagg
    20521 tcttgtacta tgttaaagac gaaatagttg tagatggaaa aaacaaagaa gtaaagaaaa
    20581 ttcagctttg gacaaaagat gcaatccatt atttcgttta tgcggataac aaagtcagat
    20641 tagatgatac agtgaccgta aatcctaccc ctcatttatt ggtaaaggac aagaaaaacg
    20701 aagaggtcct gggcaagggg catggtcgtt tgccttttat ggtcttgcat aataatcgcg
    20761 agaagttgac agatcttgag ccgatcaaag acctaataga cgattatgac ttgatggctt
    20821 gtgcgttatc aaataacttg attgatttcg accatcctat ctatgccgtg agaggattcg
    20881 aaggggatag ctttgataaa cttgttacca atttaaaagc aaagaaaacg gtcggtgttg
    20941 gtcctgacgg aggacttgac gtaaaaaccg tagacatccc catcgaagct cgtaaagaga
    21001 aattgcggat tgacaaagaa gccatctata agtttggtat gggctttgat agctcgcaga
    21061 ctggcgatgg gaacatcacg aacgttgtta tcaagtcgcg ttatagtctg ctagacctca
    21121 aatgcaataa aattgaagtg cgtttgcgca ggattattaa gcaaatgtta gagttgattg
    21181 ttgaaaatat caaccagagg tactctaaag cctacaatac ctcagatatc gaaattatta
    21241 tcactcgaga cataatagca aacgaagtag ataatgcaac tatagcaaaa acagaagcag
    21301 atacgaaaca agttgcaatt caaactatct tagatgctgc gcctcgctta gatagtcgta
    21361 ctgttttaga actattagct ggcatacttg aaattgatcc tgatgaggtt gaaaaagcct
    21421 tagacgaaga ggagtatcga ggggatttag agcaagatac ggaggtagag gatggagttg
    21481 aaccagtatc agaaggagat gcaacatcta ctacaactac aggaccagag ggttaatcgc
    21541 cagttataca acctttacgt ggatatcgtg aaagagctga aaaaatctct attggctgag
    21601 tatcaaagct acgaaaatct atcgcgtagc aaaaagatgg acttgaagcg catgtcagct
    21661 atgctagaag cgattgacag ccagtctcag aagcttaaaa caggtctgaa tggtacaata
    21721 ccagaccact tagaaagagt cggtaaaatg gcttataatg agctatttta cgaatatgag
    21781 cagacgaggt cagcaatcca attcgctttg ttgccagaag aagaattgaa gacgattata
    21841 gagactcctg tagcaggtct gcgcttgtct caaagaataa acgatggagt tgtgtcggac
    21901 ttacgaaaga gtatcaaaag cgagctaaca cggtcgtttg tgcatggatt gagttatcaa
    21961 agaacagcta aaagactatc agagttgggc agttcgtctt atcgcagagc gttgaatatc
    22021 actcggacag aagctggcag agtatcagct atcgctcgtc agaggtcgca aaaagaagcg
    22081 gttgacctag gcatagagtt caaaaaaatg tgggtagcga cactggataa acggacacga
    22141 aatacccacc agcacttaga cggtcaacaa gttggtccag aggagtattt tgaacataat
    22201 ggtttgagaa ctttacagcc ccacatgttt gggatagcca gcgaagattg taactgccgc
    22261 tgtcggacta tatctcgctt aaaagatgac gatacaccgc tgttgcgtag ggatagcgaa
    22321 acaggagagg ttgttgagta tcggaattat cgagagtggg agaataaaaa actttcgtca
    22381 gtagaagtag ataccagtcc gaaaccatat gattttatag atttaagcaa tccagaaaat
    22441 cagacgatag aaaacttcga gataatactc tcgagagcca aggttgctgt agaagagtat
    22501 aagaagcata caggaattga cttggtttct gaatttaata ataagaattt taggtcaatg
    22561 tctaatccat atgatgataa taaagcaaaa tttctcaaat ttttgtataa taagattggg
    22621 tatgatgcca aaccacaaaa gcttagtgat acaaaaggct acaacttatt ttatagaggt
    22681 attactggta gtaaagagac tggttcaacc gcaaaagatt tttataatag acttgttgac
    22741 ggtgaatatg atttctctgg tgctatgtca tctatggttg ggcgcggtat ttatttcagt
    22801 attgaacagc gaatgggcca agtttatgca aaaaatggta tattagcaga aatgtatttc
    22861 ccaaaaaatg ctaaagtcat agatgatcaa gttttaaaaa gtttcagaaa tgctttctcg
    22921 aatgaacaat tatctaatcc tgaattagcg gcaatcaacg acctaataaa ctatgatatt
    22981 ggacctaaga ttaatgtggc tggagataga cattttgatt tttgggcaat ttttagtggt
    23041 cacgatgcag ttcaaagaga taattatgag atattagcag tgtacaatcg tggtgttttg
    23101 ggggtgaaag ataatgatta aaactacata caccttgtta atttcagcgt tcagtctgat
    23161 tgaatacgaa aaaaagtatc agaattttga tatgtttgac caattaaaaa aaatcactcg
    23221 tcgcctagat atgaaaaatg caccggattt ctatccaatt acattagatg atttttctga
    23281 cacgtctata agtgatgaag ataaagcgat attatttgat tttatcaagc aaaaccaaaa
    23341 caagttagat gagcacgaag actcatttga tatttttgta cagttagcac ctagagaaat
    23401 ctaagtgctt ttttgtacca aaaaacagga ggaaacatga acagagataa gaaaccaggt
    23461 atggaaactg tcaaaattgg cggtatagtt tatgaagtca gcaagaaacc agatttgcag
    23521 ggtaaaaccg gtgaatgggg acatattgag tacaagacag gtaagattgc gcttgatgac
    23581 tctaccagtc agcaaattga agaccaaacg cttatccatg agatcgctca tgggatctta
    23641 gttgaagctg gttacgtgca acatgaggaa gaacaagctg accgcattgg caaaattttg
    23701 tatcaagtgc tgaccgacaa tgatttcagt tggttgtgga aaggaggaac caatggctag
    23761 tttttcaatt gacctggagc taaactggga gaaccaagac gaacttcaac gtttgctgca
    23821 aaatgtcgat aaagcccaac aagcgtacca gaatgctttg aaagaattgt ctgagttcaa
    23881 accagacatt caggttgttt ctaaaaatgg aggttacaag gcacacgaat aaacgtatca
    23941 aaaagaaacg tgaactgatt gaacaagttc agggaactaa agaagctgtt gatattgcat
    24001 tgaatatcat taaaagtcta cttgatgaaa acgccaaaca agcaaatgaa attgccgagc
    24061 tacgttcaat catcgaacgc aacgcccagg ctacgaattc gagatttgac aaaatcgaga
    24121 agcaagtagc taatagtaat gctaagaagc cgttttggaa acggtaagga ggtagttcaa
    24181 catcttgaca gcaggaaaga ctgcaataat tacatagcct aaccgtgtcg aattcgatgc
    24241 ggttttcttt atgtcctgtc gcatgacgga aaactaggca actacccaaa ttgtcgcagg
    24301 gtatattgtg acaactcccg caaggggaga gcccctaata aaatctatgg aggtaaccaa
    24361 taatggattg gttgaaagaa cttatcgaga aacatactgc agagggtaaa acagacattg
    24421 atgcggtcat gaacgcagtc aaaaaagagt tcccgaaaca cgctgtcccg aaagatgtct
    24481 acaacgagca ggctgagaag ctaaaagtcg ctaacagcac gctagacacc ttgaagaaat
    24541 caaacaagga caacgaagag ctgcagaatg aactcaaaac gtacaaggac aaggtgtcgc
    24601 agctagaagc cgaggcaaag gaaacagcca agaaacagac aattaaggac gcgctgataa
    24661 atgctaaggc gactgatgta gactacctca tgtacaagct tggcaacttg gaggaagacg
    24721 atagcggaaa aattaaggat ttagaccaaa aaatcaaaga tttacaagtc aacttgccga
    24781 acttttttga atctgctgaa gcaaaagagg ataagctgaa tggctatgaa catttgggcg
    24841 gtgcgggtct cttacctggt tctgcagagt ctacaaaaga tgttatcgac gttattggaa
    24901 acaaagaatt gaacttaact caattcttac aggaaaaagc gaaaggatag aaaaatatgt
    24961 ctaatgaaat tacaaaaatt attgatacga tcactccaaa ggtatttaat gcttacatgg
    25021 accagtatat caacgaacat tcgttgctag ttcgctctgg tgcggttgtc gctgacgaac
    25081 gtgtatctcg aaatattacg gctggtggtc taaccgttaa catgccgttt tggaacgatt
    25141 tgagcggaga ggaccaagtc ttatccgaag acaaagaaat cgaaacagga aaaattactt
    25201 ctggaaaaga tgtagcagct gttctttacc gcggacaagg ttggtcagta aacgaattgg
    25261 ctggtgttgt ctctggttca gaccctatgc gcgctatctt agatcgcatt ggtggattct
    25321 ggcttcgtca agaacagaaa gtgctaatgg cggtactgaa agggttgttt gctacgagcg
    25381 gacctcttgc agatactcat ttgttggatt taagtaaaaa aactggaaaa gcagcagttg
    25441 tggacgctaa ggctatctta gacgctaagc agttgatggg tgatgcttct cgcaaactca
    25501 aaattttggc agtacattct tctgtttata ctaaattgca aaaggataac ttaattcaat
    25561 acatccaagc taccgatgca aatattcaga ttccgactta tttaggatat acattgttag
    25621 ttgatgatgc attggctcca gaaggtgacg tttacacatc atatttgcta ggtagtggtg
    25681 cttttggacg caatacaggt catccagaag gtttgacaac attcgagaca gaacgcaagg
    25741 ctgctgcagg ggtagacaat gtctatactc gtcgcgctct aacaatgcac ccgtatggtg
    25801 ttcgctggca agataacagc attgtaggat tgactccatc aaacgcagaa ttggcaactg
    25861 ccgaaaactg gaagaaagtc tatgaagaca agaacatcgg tattgtggct attcgtcaca
    25921 aattagcgtt ttctagcgag gtgtaagcat ggataagtat attacaatcg atttgttcat
    25981 tgatacagat gatgatcgtg tggagtatcc tattggtgct ctctatcctc gtgaaggcta
    26041 caccccttca aaagagcgta tcgactctct tttgagtggt gacaatgcta ggggtgtacc
    26101 gttgattaag caaattatcg aattgccagc aaaaacaact attccatctg acgctgaaaa
    26161 cgaattgact cgagatgccg tcaaggagaa attgacccag ctaggcattg agtttaatgc
    26221 cagggctaag acagagagtt tgctggaatt gttaaaaaca gccgaagagg agtagttgaa
    26281 ctcctctttt ctttttgagg aggttctata tgattatatc tttaagtgag gctttaatta
    26341 ttcatccgaa agcaacacag gaaatgtgtg acggactaga aactatggtt cgcaaggtga
    26401 ctaataacca ttttcagcta gaaaagttcc gcttaacgca tttgtcgttg gaaggttcga
    26461 ctattaaagt cgataaagga cgtctggata tttttcgaga gggagacaca gtcgaaatta
    26521 acggtactga ttttaatgac ggtttatatg ttatttccgg cgtctctgac ggcattttgt
    26581 ctgtcaatag tacatttata ccggaatcta agaaaggggc tattttaacg aaaataagct
    26641 accctgcaga cgtgattgaa ggtgtaaaga aactactatc atatgatgct aaaatgacag
    26701 ataaaatcgg agtgaagtct gaatctgtcg cacgttggtc tgtaacttac tacgacgtga
    26761 cggcttccga gagtcaagaa ggctaccccg cagttttgct aggttttttg tcaaaataca
    26821 aaaagataag gtggtcttga agatggaagt ggctttactt aagtatcggg aaagtgggga
    26881 aaacgcccta ggtcaaaaag tttacgattt tgtggaatcc gaaaaaatgg aaggttattt
    26941 ggatatgctt acgggcaacg aaacagatag agcaacagct ttaacatcta gcactcacat
    27001 ctttttgacg aagcaggtag atgtccaaat tacaacaaaa gatagaataa gggccaaagg
    27061 aattgattac gaagtttcat ttgtagacaa tccagtcaat cttgatcacc atctggaaat
    27121 ctatctgaag gttgttgctt gatgaaattt atagacaata gcgccaaagc taaggaagag
    27181 attaaatatc aagctattcg tgctctgaaa gaaatttgca tgatggtaga ggcacaagcg
    27241 attctactcg ctccttcgga tactggaaat cttagagagc atatcagtca cacggttgat
    27301 aggcacgaat tgattggcta tgtagggact aatgttagtt atgccattta tgttgaattt
    27361 ggtacgggtg agtttgcaga aaaaggaaac ggacgcaagg ggggatggct atatacaacc
    27421 cctgacggga agtcgtattt cactcgtggg aataagcctc aaccttatct acgacctgct
    27481 tttcgtaaaa acaaaaaaca gatacaggcg atttttgaaa cgtatctgag tcagattgga
    27541 ggataaaatg actcctgtaa ttgctaaatt gacagaatta tttaccgaaa ttgttcctga
    27601 agcctatttc ttatcaaact caaacccaac tgttgcgtat ccctacctca tattttctta
    27661 tgatgcagaa aatagaaatt ggggtcaaga tggggcttat gttgatgtcg atatttttga
    27721 caataaaggt gaggatcaag agcagattga gcatctagct tttttattaa agcgagagct
    27781 agggcacagg gctgtcatgt cggaagaatg ttatatccgt ttccgtttcg aaggacaagg
    27841 aacgattgat actatgtcag atgtccttca acggcgaaac gtacgatttt atatcacaat
    27901 agattggaga aatgaagatg aaaaaaccag ttaaaaagac aggttatacc aagaatacac
    27961 ctaaaagcta tatcgtgaat gctggtgcgg tgtataaaaa tttaacatgg aatactgaga
    28021 cccaaaaatg ggaaggtgag ctatttggag ctacatcagg cggaaataaa ctgacaatcg
    28081 aacaaaatta tcgtcaaatt gaagtagatg gtgtcttcac tgctgcggtt ggtcagaaag
    28141 ttcttgaaag tcaaggggct aagttggaaa tcaacgctaa agaattgact gctgaaaaca
    28201 tccgtatggc tatcaacggt gttattgagc aaggagatgg tcagaaagtt ccagctacat
    28261 ctaaggtcat cacagctaag ggagagctta agaaaacaga ctacattact aatctaggct
    28321 tagtaggtaa cctttcaggg accaatgaac ctatcatcgt cattttagat aatgctctct
    28381 gtgtttctgg tcttgaattt gagacgaagg ataatgacga agcagttatc acaatgacgt
    28441 tcgaagcgca tgcaaacgaa gaacagattg atgatttgac gttaccgtgt cgcatcatct
    28501 acccaactgt agatatggag gtttaagatg gcagaaaaac ttgaaatgcg agagctaaat
    28561 ggcggagaca tctttacgat gttaggaatc attgggaaat tagatattaa agacgaggtt
    28621 gtagaattgc tggagcgtca atttaaccaa ccagccatcg tcctgcaaga ccataagaag
    28681 aagcagccga caaaagccga gaaagaagcg gcagaattag ctacagaaaa gcgcggtatg
    28741 ttgctgatga cggatattgg ctttgctatc ttgcgacacg taggagaagc caaaaatgat
    28801 gttaacagct ttttagcaga tttgacagga actagtcgaa aagatattga gtctcttagc
    28861 atgttagctt atacaggttt gttgatggat tttgctaaaa aggcggaatt gcgtgatttt
    28921 ttccaatcta tttcttctgt cttggcttag atttgcatcg gctacgtgac attttatatc
    28981 gacgttatgg aaatccagac tctctcttga agtcacaaac tttgaaagag tctttggatt
    29041 tctttttgta tttgtttgat gaagaggata aagatgttct aaaagaaatt tggttagcaa
    29101 aagaagtgga catgtctctt caaagtttta ttgataaaca ctccaaaaaa cgatatatca
    29161 gcaaagtgaa tcgtaagcaa attctagaaa gcgatataga ttctgcattg aaaaacgcag
    29221 aatctattct gaatatgggt tatgggaagg aggtgcgatt agatggaaat ctttaagtta
    29281 tttggttcaa tcggcttaaa aaataaagaa gctaatcaag ctattgatga gacaacggga
    29341 aaagcacaga cagctggaga caagatcaag gatacattcg gtaaagttgc tacgttctta
    29401 ggaactgtat ttgctggtaa agctatcttt gattttggga aatcagttgt agaagctgct
    29461 gcaactgcca aagcagtaca agcacagttt gaccaagttt tcgagggtat ccgcgatgta
    29521 gctgaaaaca agcttaatga tttagctaaa acggtcggtg ccgtacctag tcgtatcaaa
    29581 cctgccttta accaaatcgc ttcgtttgct aaagttgctg gtatggacgc tagtcaatct
    29641 ctagaattta caacacgggc tacagaagca gccgcagata gtgcagcctt ctacgataag
    29701 tctttagaag aaacaactga gacgctcaaa tcttacctca aagggaactt caacgtagca
    29761 gataacctcg gtattctttc gacggaaaca acccgtaacg ctaaggcgac agaattattt
    29821 ggccaaaagt ataaagacct cgatggtata caacaacaag aagtattgct tcggatgttt
    29881 gaggatgcta ataaggtgtc tggagctatg ggacaagcag caagggaatc tgatggcttt
    29941 gaaaacgtca tgggaaatct caaacagaca tgggaagatt tcaaagtcct tgtcggagga
    30001 ccgctgttgc aaccagtggt cgcaggtttg caacttgcaa caaaatggat tcaggactta
    30061 ggtggtaaat ttcaagagtt tgagcctaaa attacgttat ttgcagaaaa actcaaagac
    30121 ttcacaggat ttctaaaaag caatcctgca gttcttgacg gcttgaaatc ggcggtggtt
    30181 ggcctaactg ctgcttggac tagctacaaa gttattacag gagttcttag aggtattgag
    30241 actgcccgaa acactctgct agctgtagga aacggattga tgttagctag gtttacccaa
    30301 tcgggtgctc taacggtagc agaagcaaca caagcggccg ccacaatggg ggctacagga
    30361 gcgttcagcg ccttcaatgc agttttgtcg ctaaacccta tcatgctagt agttggtgct
    30421 atcgccgcac tggttgcagg ccttgtttgg ttctttactc aaaccgagac tggtcgtgag
    30481 atgtggtcta atttcattga atgggcacaa aacgcttggg aaggaatagg agaatttttc
    30541 tctaacctat ggcaatccat cacagaaggt gccatcaatc tttggaatgg catcgttgat
    30601 acgtggaatc atgctgttga aatagtcaaa aacgtctgga gtagcatttc tgaatttttc
    30661 acgaatctgt gggcagatgt gcagacgaca gcaattgagg cttggaatac ctttgttcag
    30721 ggcgtgatga tggttgtcca gccgttcatt gataccttca tgcaatattg gacagcgatg
    30781 tctgatggac tttctcagat gtgggaaggg gttaagatgt ttttccaagg ggcttgggaa
    30841 tttattaaag ccattttcat gggagcagtc ttaatcattc ttgatattgt tacaggaaac
    30901 tttgggcgat tgggtgctga cttagacttg atttgggaaa gcattaaatc cgcaatcact
    30961 atggtctggg acggtatcaa gacctacttt agtggtgtaa tagacgctat cgtagccttc
    31021 ggaactactt attttgagaa tttcaaaaat cttctctcag ctatttggga aggcgtgaag
    31081 tctgcggcgc aaggggcatg ggattggata aaaacaacgg tatctaatct tataaccagc
    31141 ttgattgatt gggcacgttc tacatgggac ggattcaaga attttctgtc aagtttgtgg
    31201 gaaggcatta agtctaccgc aacaaatgct tgggaaaacc ttaagcaagg cgtccagaat
    31261 atcattgatg gtatggtttc gggagccaaa agagcttggg ataatctaaa acagagcgta
    31321 tctgatttgg tgtctagcgt tacaagtatc tttgacaact tgcgtaatat cgatcttttt
    31381 gcagcaggtc aagctatttt ggatggtttc ttaggaggtt tgaaatcggc ttgggacaat
    31441 gttacaggat ttatcagcgg tattgccgat tggattttcg aaaacaaagg acctattgaa
    31501 tacgatagaa aactcttgat tcctgccggg aatgccatca tggaaggtct aggcggtgga
    31561 ctagaagacg gttttgacga tgttcaagat ggagttcttg ggatggctgg aaaacttgtt
    31621 cagaaggttt ctagtgcggc taagcatttt aaagatacag ttgttccaca gatgggcgat
    31681 tggtcgtctt ctcttgattg gtacgcaaaa ggcgaaatca tctcacttcc atccatgtat
    31741 gatgtatcgt ctagcaatct tttggaacat tcgtcagacg gtcagtctaa tagcttgttg
    31801 caaaagatta tcgaattatt acaagcactg cttgataaag atagtgatgt ctatctagat
    31861 ttagaaaaag ttggtcgaat gacctacgac gaacacggaa ggattataga aaggggagga
    31921 taagctatgt tagaactaaa agtagatggt atcagcacta agacaattgt cgagtgtatt
    31981 gtagctggtt taggagaaga tagaacttct tctcctcgtt ttattgagga aactatttac
    32041 ggtatgaatg gaacaaatcg gacaatcgaa gcctacgacg aggtggacag agtgttgacg
    32101 tttcattgcg ctagtcttga tgctgttcgc caactcataa aactatttaa aggcttagat
    32161 aaaaagttgg aattctggca tatcccaaat agtttctact atttcgatta caagagtagc
    32221 agttataaaa ttaatcacaa gtgtagttgg gacgtctccg ttaaaattag cttgaagcct
    32281 tttcgttatc taagtgaggt agaagatgtt gtcttaactc aatcgggagc tatcacaaac
    32341 atgggtgata tttttagcga gcctaggatt gaggtgttcg gaaatggtca aactagctta
    32401 actattggaa atcaagtgtt aagactgaat ttagatacta aagctgttat agagtgccgg
    32461 catgggtatc aaaatgtata tgataaaaat ggaattatca agaatagcat tcgcacatca
    32521 ggcccgttct tcgaaattcc tgcacaggtt acaagtggtg ttgttttggg ttccggaatc
    32581 aatagggttg taattcgtcc tagatggagg tgcgaaattt gattagctta aaagataaaa
    32641 atgttttgct tgtcaatgct tttgatgatg aaatcgaaca agagggtaac ggcaagtatc
    32701 aactttcttt taaatacccg acatctgatc agcgttggaa aaacatagaa ttagcagatt
    32761 tactgttagc agacgatttg catggcgagc aggagtttcg agtttttgag attgtaaaac
    32821 gaaatggtta tatttttgtc tacgctaatc aggttgtaga tgatttaaac agctactcga
    32881 tcagtaacat ctctgtagat agagttaatg gtcaaactgt tatgcaagct ttggcaggca
    32941 gtattatccg aaaacatccg ttcgcttttt atagtgacat tcaggatagg cacgttttta
    33001 accaaaaaaa catcagtgtt atgggcgctc tggcaaatgg taaacattcg attattggac
    33061 agtggggtgg agatttagtt agagataaat ataacgttaa tttgttaaaa cgaggagggc
    33121 gagaatcaga agctcttttt atgtataaga aaaacttaaa atcttatgca gaaacaaatt
    33181 ctataaaagg gctatttact cgtttaaacc tctctgttaa gaattcggac ataaaaacaa
    33241 ccgtagacag tcctttgata ggctcttatg gcgggagggt ttatgagtta aacgtcgagg
    33301 ttgcagatca agatgtggca actttagagc agctgcaaga gtatggtcgg aactattttg
    33361 cagaaaaatt aatcgatgta ccaaacaata gtttgacgat ttcggtcaca gacagtcagg
    33421 aatatgatgt ccgaatattt gacacggtct ttgttcatca cgaaattttt gacaaagacc
    33481 ttcggatgaa gattactagc tacagattta gtccgatggg tcgtaaatta aaatctattg
    33541 gttttgggaa aattaaaact agcctcactc aacaagtgtc aaatatcgct actgaagttg
    33601 tagaacagtc ggtatctgta gcaggacaag ttttcgaaga aaaactacaa aaagggatcg
    33661 aaaatgccga taaagttatc gatggcaaga ttaataaggt tagagatgaa atcaacgacg
    33721 gcatcgagca gtcaagggcg gaggctgaga ggcatgcaga caatatcaag agaagtattg
    33781 atactgaaat cactcaagtc aaccaatcca tgcaagcaca atctgaggaa cgcgacagac
    33841 aggttgcgga tatattgtcc aaaacccagt ctgtagaatc gcttgccaac caagccaagt
    33901 cggatgcggc tagtgcattg gctagagcta accaggtcaa gaccgaagct atcgcagatg
    33961 caagagcgca ggttgcgacc gttaatcaag cgttaaatac tgctaagact gagctacaat
    34021 cagcaatcgc tagtgcagac caaaaggcga gggatagcca agcaagtgcc acagctttgc
    34081 ggaatgatct aaacttgcaa gcgagcaaga ttttggcaca agcacaagcg cagacggcat
    34141 tgactagccg tgtgacaact gtcgaaactc tggcagatgg tacgaggtca acagtcgcag
    34201 aactctctaa aaccgtttct aaggcgactg gagacatcac tagtgttacc agtcggacta
    34261 agaccgtaga agacactctg agccaaacga ggacccaata cgaggctctg acgcagaccg
    34321 tcaatgctca gacaggacag attgagagta tcaatcgcaa gactgctgac ttgcagagtg
    34381 gcatagatgg ggtgacggag cggtttgaga gtttgaggat agaagacaa
//
LOCUS       DASFQD010000006        32765 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.006, whole genome shotgun sequence.
ACCESSION   DASFQD010000006 DASFQD010000000
VERSION     DASFQD010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 32765)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32765)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32765
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.006"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            419..1234
                     /locus_tag="U1021_000227"
     CDS             419..1234
                     /locus_tag="U1021_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM4710825.1"
                     /translation="MIKLIALDMDGTLLNEKKELMQPQIDAIHQAVEAGVKIVLCTGR
                     PLAGVKPFVEQLGFDTEEEFIIVNNGCSTHSTKDWSLIDWEELSISDIDYLSTFIEND
                     DVQISLFDEEDYFVLAEKANARVNLDAGLVGMTPQPIVLKEAQSGQHRFFEAMFVGEK
                     EHIDAFENQHNPILSQGYSTVRSQDYLLEILPNGASKATGLKKLADRLGILPEEIMAM
                     GDANNDLEMIEFAGLGIAMGNANEQVKAIAQDITDTNENNGVAKAIEKHILNK"
     gene            1244..2464
                     /gene="pepT"
                     /locus_tag="U1021_000228"
     CDS             1244..2464
                     /gene="pepT"
                     /locus_tag="U1021_000228"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HEM4710826.1"
                     /translation="MKYPTLLDRFLVYVKENTRSDEHSTTTPSTQNQVEFAQNILLPE
                     MKRIGLQNVHYLPNGFAVGTLPANDPSLTRKIGFIAHMDTADFNADGVNPQIIENYDG
                     NPIALGTSGYELHPKDFPQLANYQDQTLITTDGTTLLGSDDKSGIAEIMTAIEYLVQN
                     PDIKHCEIRVGFGPDEEIGVGADKFDVEDFDVDFAYTMDGGPLGELQYETFSAAGAKI
                     DFLGRNVHPGSAKDQMINAFQMAIDFHNALPEADRPEKTEGYEGFFHLMNMEGSVDTA
                     STTYIIRDFEEADFQARKQLMLDIAEKMNANFDTPRVIVNLHDQYYNMKKIIEKDMTP
                     INIAKDVMENLGIKPLIEPVRGGTDGSKISFMGIPTPNIFAGGENMHGRFEFVSLETM
                     EKAVDVILGIVAYK"
     gene            2595..2993
                     /locus_tag="U1021_000229"
     CDS             2595..2993
                     /locus_tag="U1021_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710827.1"
                     /translation="MTEETLAQGILIGIWGTTLLFSFIWYILVAISNYILFKKAGYAG
                     WKSLIPIYNLYIQQCIAFGYEKRWFILFLLIPLAGPLYGIYLVYNFGRSFGLSAVQAI
                     FYVLLTPIFNLYIAFNDGSRYQGPQEFFID"
     gene            complement(3029..3945)
                     /locus_tag="U1021_000230"
                     /pseudo
     CDS             complement(3029..3945)
                     /locus_tag="U1021_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637837.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
     gene            4076..4393
                     /locus_tag="U1021_000231"
     CDS             4076..4393
                     /locus_tag="U1021_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEM4710828.1"
                     /translation="MYYPVSSILIEFLVLAIVEKQDSYGYEISQTIKIVADIKESTLY
                     PILKKLEKAGYVTTYTQEFQGRKRKYYTITPAGREHLPFLQGEWNSYKDHIDGIIEGS
                     LRK"
     gene            4390..5502
                     /locus_tag="U1021_000232"
     CDS             4390..5502
                     /locus_tag="U1021_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat protein"
                     /protein_id="HEM4710829.1"
                     /translation="MTRADYLNQLEQALFQLHPSARQEALEYFNEYFDEKDNDEEAII
                     ELGTPDEAAKEIIANLPEDALITKKDQVSPHSSKPFDFDFDFDFQFDWENFFNNFKHS
                     TYQARERMELKAKCEELPEFSNLQILLEDQALSVQTYDRETVLLHNPVSEDGSYQAFD
                     YQLVQDSLYLTSKPSPNHLYFSNNQASSAILKIPKKLLPLTSLNLKTTDSRLSMADVQ
                     ASEQLVINAKDSSISMTKVSYPSSALRLEDATLTISDGQLSELKLEASDAVITLSSMS
                     LSDARITLEDCVWKLKDFVLEKSLNCQAEDSVLTYRPSTDISLDIWEEDSSLKLLKDK
                     AFTMMKEDDITHLSYKQENSPAQLVIHCQDCQLSIG"
     gene            5514..6092
                     /locus_tag="U1021_000233"
     CDS             5514..6092
                     /locus_tag="U1021_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1700 domain-containing protein"
                     /protein_id="HEM4710830.1"
                     /translation="MNRKEYLQKLEKYLKNLPKEDFQDTIDYFNEYFDEKENDEQAIK
                     ELGSPKEAAYEILANLYDKEKTEDKPNTRNMVWLTILSILAAPIGVPLAITLVALFIT
                     LLLIIFSLFLLFISLWIVLLSLAIAQLLLAFDLFTLSWSTSLLFTGLALVCLALTLLG
                     SKFTLDLGSKTFVLVLHWIQRKIRKGGYYETD"
     gene            6079..6933
                     /locus_tag="U1021_000234"
     CDS             6079..6933
                     /locus_tag="U1021_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat protein"
                     /protein_id="HEM4710831.1"
                     /translation="MKQIKPFTKISLSLFTLGTILSLIGYLAGGWTNMKTVAENYFQP
                     QTASFSNIRAIEVNEKLSIMPSPDNQFHLHYYRNQHKGIDLLSHQVQDGKLTISSAYQ
                     GIVTYDGLLEPILNLVNDQNVAYYQPVLQVPKNSTIESLSGSIQGDVYLDKVTIQDFQ
                     LFVENGDMLIENSHISLIRLLHINGEVAINQSTLTSPADITDTTGSILTVEDGDFKAE
                     NLKLEGKHGISNYDGSIDISLHPKTKTDIHIDASQNNLGIDLPTYSNPQATNYLYIST
                     LDGELNIQ"
     gene            complement(6969..7328)
                     /locus_tag="U1021_000235"
     CDS             complement(6969..7328)
                     /locus_tag="U1021_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HEM4710832.1"
                     /translation="MSIFTTILASIVAIEHLYIMYLETFATHSDSTSRVFNMEKEELQ
                     RKSVTTLFKNQGIYNGLLAVFLIYGIFTGNLEVTTIFVLFVIGAAGYGAATSSPKIIL
                     TQGGPAILALISILLFK"
     gene            complement(7348..7773)
                     /locus_tag="U1021_000236"
     CDS             complement(7348..7773)
                     /locus_tag="U1021_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM4710833.1"
                     /translation="MQEMEDLLYRLKVADETISNLFEKQLGISLTRYSILQTLLKDAP
                     LHQLALQERLQIDRAAVTRHLKLLEESGYIIRKRNPDNQREVLVWPTEQAREALITNP
                     SAHHQAIKTSMNQILTVEESEQFLATLDKLLIGLQNLPI"
     gene            7934..8692
                     /locus_tag="U1021_000237"
     CDS             7934..8692
                     /locus_tag="U1021_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEM4710834.1"
                     /translation="MENTPRLNLVIDVLMLAGAILAQSGAEIHRVEDTMIRIAHSHGI
                     EQANVLAIPAAIFFSIDHTNISRMKRIVNSNYDMQKVCDVNQISRSLANEEISLEEAW
                     SQLNAIKQQKPPYNNIQITLAAVVAAPFFTIMFGGSLLDAAGAVLATALAFPISLIVE
                     RYIGIDFVTTFVGAFVFSLTSYLLSATTTLPINPNLINAGAVMPFVPGIAFTNAVRDL
                     MTNHINTGMTKFFQTALIILSLGAGTTVAFMLVR"
     gene            8696..9148
                     /locus_tag="U1021_000238"
     CDS             8696..9148
                     /locus_tag="U1021_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEM4710835.1"
                     /translation="MTPVHFLLQALASYIAIAAFLIVLNVQRKMLVPGGLLGMLVWLI
                     YLLLLEPTNVLIATFFAAIIGSCVSQIMSIWLKTPSVIFSLAILAPLVPGYRAYMTTT
                     YFVSGDHAQALTNITTVLTLALVIPIGMASGTILLRLYKVLRTGKKAA"
     gene            9205..10443
                     /locus_tag="U1021_000239"
     CDS             9205..10443
                     /locus_tag="U1021_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEM4710836.1"
                     /translation="MNQNVTNLKLAERGALLSIGAYIVLSGIKLVAGQLFHSDALRAD
                     AFNNISDIIGNIAVLIGLKMAQKPADTDHKFGHWKMEDLASLITSFIMFVVGFQVLYD
                     TLQKLISNSSVEVDIMGAIVGIFSALVMLAVYLYNNRLAKKVRSKALEAAAKDNLSDA
                     VTSIGTSIAIFAAAFNLPIVDKIAAIIITFFILKTAYDIFMESFFTLSDGFDENLLKK
                     YEEDILKLPKIVSVKSQRGRTYGANIYLDVVLEMNPDLSVYESHEVTEQVEQLLTLKH
                     GVFDVDIHVEPSEIPHDEMYEHVYDKLFRFETEIQAHANGYEELIDDQYLLIDAKGHY
                     RNKTQILADHPIQTTYLSNYQMTSISHKSKLVTFEIGEYVHTSLWRRHENWTVIFHQI
                     SKKQASQIEATEKISDLHNP"
     gene            complement(10726..12036)
                     /locus_tag="U1021_000240"
     CDS             complement(10726..12036)
                     /locus_tag="U1021_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HEM4710837.1"
                     /translation="MTILATLGVLLAIVAIIYWTSKNLHVIIAAPLASLIIILTNQMN
                     VLEVMLGKEQSYMAGLAGFLINNFAIFMLGSILARYMEASGATQTIANSILKVMGKDS
                     PYKGLLAITLIASILTYGGVSIFVVIFTLLPLSRPLFKELNINWALFPIPVFLGAGTY
                     TMTTLPGAPSIQNVIPTKVLGTSLTAAPVISLAASLTLLVFGLLYMAYCLKKSLANGE
                     TYTEEEDETAVVVADKTPNLFLSVLPLFSLIGTIFLMSKTPNVLAIGLLVSILLSALI
                     FYPYLPNQKEILNAATTASIVPAFATSSTVAFGTVLTLSAGFAVIQEWIQQIPGSPLI
                     SLSVSTALVSGIIGSSSGAVGIASSNFLPAYLEMGINPELLHRVVVVASAILTVVPQS
                     GVMITFHNLSKLSMKRGLKYSFILVTVGHLLALFVILLLAPLLY"
     gene            complement(12087..12575)
                     /gene="folK"
                     /locus_tag="U1021_000241"
     CDS             complement(12087..12575)
                     /gene="folK"
                     /locus_tag="U1021_000241"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEM4710838.1"
                     /translation="MKHLAYLSIGGNMGNRQAYLQAALDKLASHPGCQLGLVSNIYET
                     PAWGKTDQADFLNLACQVYTDLSAQDFLSACQNIEQELDRVRIEKWGQRTIDLDIIFW
                     DEEKIQEENLIVPHPYAHERAFVLNPLAEIASDYRHPILKKVVSDLLAELGEQKDIKI
                     FK"
     gene            complement(12572..12934)
                     /gene="folB"
                     /locus_tag="U1021_000242"
     CDS             complement(12572..12934)
                     /gene="folB"
                     /locus_tag="U1021_000242"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEM4710839.1"
                     /translation="MDKISLNKCRFYGYHGAFKEEQVLGQIFTVDCDLFVDLTAASQT
                     DNLEDTVHYGMVFETIKAVVEGKPYILIEKVAGVICQELFDQFPKVEKIRLAIYKENP
                     PIAGHYDSVGIELERERP"
     gene            complement(12927..13739)
                     /gene="folP"
                     /locus_tag="U1021_000243"
     CDS             complement(12927..13739)
                     /gene="folP"
                     /locus_tag="U1021_000243"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEM4710840.1"
                     /translation="MSIEQLANQVTIMGILNVTPDSFSDGGHYNEVESALVQVEKLLA
                     EGATVIDVGGESTRLGATFVSEEDEIARVVPIIRAIKENYDCLVSVDTYKTGTARAAL
                     EAGADILNDVWAGLYDGDMLALAAEYKVPIILMHNQKDESYADVVGEVKNFLAERAQA
                     ALDAGVSADQIWLDPGFGFSKNVQHNLDLLQGLEQITALGYPVLFGISRKRVVDYLLG
                     GNSLPTDRDQATAALSAWAVQKGCKMVRVHNVAANRDIVKVWDQLTSGGQHG"
     gene            complement(13748..14311)
                     /gene="folE"
                     /locus_tag="U1021_000244"
     CDS             complement(13748..14311)
                     /gene="folE"
                     /locus_tag="U1021_000244"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEM4710841.1"
                     /translation="MSKQEQIEQTIYQLLELLGEDPNREGLLDTPKRVAKMYLEMFNG
                     LEEDPKDQFTAVFSEGHEEVVLVKDIPFHSMCEHHLVPFYGIAHVAYIPSKGRVTGLS
                     KLARAVEVASRRPQLQERLTHQVAHALQDALEPEGVFVMVEAEHMCMSMRGIRKPGSK
                     TVTTVALGKYKEDAILRRELLSMIHNK"
     gene            14478..14960
                     /locus_tag="U1021_000245"
     CDS             14478..14960
                     /locus_tag="U1021_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase"
                     /protein_id="HEM4710842.1"
                     /translation="MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKL
                     EPGETPQACAIREIFEETGLTVTKHALKGVITFPDFTPNTDWYTYVFKITGFEGSLID
                     CNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGGKLLDYSVDFYEE
                     "
     gene            complement(15009..15686)
                     /locus_tag="U1021_000246"
     CDS             complement(15009..15686)
                     /locus_tag="U1021_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4956 domain-containing protein"
                     /protein_id="HEM4710843.1"
                     /translation="MQLFNSIFSTANSNITLAQMSMVFGVSLSMGVLLAAVYKYKSNY
                     TKEFVITLSLMPALIAVIIALVNGNLGAGVAVAGTFSLIKFRSAAGSSKEMLAVLLAM
                     AIGLATGMGFLGLAVFMTVILSACILIFENISFAQVNQNRRHLLVTVPMNFDYDQFFE
                     NQFGKSCKQSDLLSLKYKKKKEALVLEYQVLLDKKITDKRLVDTVLSAGPLDVVLNKQ
                     MPKKKYL"
     gene            complement(15673..16416)
                     /locus_tag="U1021_000247"
     CDS             complement(15673..16416)
                     /locus_tag="U1021_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate polymerase domain-containing
                     protein"
                     /protein_id="HEM4710844.1"
                     /translation="MKTRIVQKQFKRKETKYIVDKKTFELLEKELRQYMMADEFATST
                     ITNIYFDNEDFDMIQDSLAKKNGREKIRMRVYDAIPSESSQAFLEIKKKENKIGYKYR
                     LTSNPVSVANYIENGVIDSTIKDDKVNSELEMLRERYGTIKPKMYIYYDRVSYKGIED
                     KKVRLTIDKNLLYRDYDVDAMEGKFGKNLLDPTKVIMEVKVPEERPDWLVALLEKYQI
                     EKQSFSKYGNAYKLAHNITGEEVSQHAVV"
     gene            16609..16911
                     /locus_tag="U1021_000248"
     CDS             16609..16911
                     /locus_tag="U1021_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710845.1"
                     /translation="MYEFVLEYGSFPVKLIDGFVNNRSEIPDFLKEDEEMIARLNEIN
                     ELFHQLFLTIECKFDYIGKQFPDKIEQLRELYHPLADDLLAKYGNQIELKIEPFIL"
     gene            complement(16932..17198)
                     /locus_tag="U1021_000249"
     CDS             complement(16932..17198)
                     /locus_tag="U1021_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2087 domain-containing protein"
                     /protein_id="HEM4710846.1"
                     /translation="MNTQDIQEKFFREGKLIVIPKKLKSKQVLFAYLQEELAKKGSAF
                     TEKEVNAFLAEIYDDYAILRRYLVDYGYLSRDQYGLEYRIEEKR"
     gene            complement(17253..19652)
                     /locus_tag="U1021_000250"
     CDS             complement(17253..19652)
                     /locus_tag="U1021_000250"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002897790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEM4710847.1"
                     /translation="MLVSYKWLKELVDFDATSHDLSEKMSTTGIEVEGVEQKSAGLSK
                     LVVGQVVSAEPIPDTHLNICQVNVGEAITQIVCGAPNVKPGIKVIVALPGARIAGNYK
                     IKKGKIRGVESLGMLCSLSEIGVSDSVVPKVYADGIYHLPEDAVVGEPVFSYLDLDDE
                     IIELSITPNRADALSMRGVAHEVAAIYDSKVNFKPVALDESDKKASDVIEVAIESDKV
                     TAYTARVIENVTIAPSPQWLQNLLMNAGIRPLNNVVDITNYILLYFGQPMHAFDFDKF
                     DGKKIVARQAKEGESLVTLDGEERDLIADDIVISVGDKAVALGGVMGGANTEIDNNSQ
                     TVVLEAALFDGKSIRKTSGRLNLRSESSSRFEKGINVATLTEAMDTAAAMITELAGGQ
                     VLSGIVSAGSVDTSDVPVTATIDYVNRSLGTNLDYAQIADIFRRLGMETTGDASQFTV
                     AVPRRRWDIRIPADLVEEIARIYGYNNLPTTLPKEDGTAGELTLTQNIRRQVRSLAEG
                     AGLTEIISYALTTPEKAVEFAARPTTVTELMWPMTVDRSALRQNMVSGMLDTVAYNVA
                     RKNKNLALYEIGKIFEQSGNPKEDLPQEINKFALVLTGLVAEKDFQTPAVPVDFFHAK
                     GILEAIFGHYKLAVDFVATSEIAALHPGRTAEIHLNGAVIGFVGQVHPQTAKDYGIPE
                     TYVAEINLDAIEEALQPAQPFTEISKFPAVSRDIALLLSSDVKHQDVLDAIAGAGVKR
                     LTKVTLFDVYAGSNIEAGKKSMAYNLTFQNPADSLTDEEVAKYMEKISKALVELGAEI
                     R"
     gene            complement(19654..20175)
                     /locus_tag="U1021_000251"
     CDS             complement(19654..20175)
                     /locus_tag="U1021_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4710848.1"
                     /translation="MQIDPIRLEEVSVLQELAKQTFAETFAHDNDPKELEAFFELSYS
                     LEVLTRELSDPNCQYYFLRVDYQIAGYLKLNQGSAQTEQELENAFEIQRIYLLRAFQG
                     SGLGKVLFEFALEKAEQSNCDWVWLGVWEHNHKAQKFYAKYGFEKFGQHEFAVGDKID
                     VDWLLKRPLHQKG"
     gene            complement(20718..21761)
                     /gene="pheS"
                     /locus_tag="U1021_000252"
     CDS             complement(20718..21761)
                     /gene="pheS"
                     /locus_tag="U1021_000252"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEM4710849.1"
                     /translation="MSNIEQQLAELSQTTLEKLKEIQHQGEKELQDLRVAVLGKKGSL
                     TDLLKGLKDLSNDMKPIVGKQVNEVRDVLTAAFEETAQKVAAAKIQQQLASETIDVTL
                     PGRQVKVGKRHVLTQTSEEIEDIFLGMGFQIVDGFEVEKDYYNFERMNLPKDHPARDM
                     QDTFYITEEILMRTHTSPVQARTMDQHDFSKGALKMISPGRVFRRDTDDATHSHQFHQ
                     IEGLVVGENVSMGDLKGTLEMIIKKMFGEERQIRLRPSYFPFTEPSVEVDVSCFKCGG
                     DGCNVCKKTGWIEILGAGMVHPQVLEMSGIDSTKYSGFAFGLGQERIAMLRYGINDIR
                     GFYQGDVRFSEQF"
     gene            complement(22218..23942)
                     /locus_tag="U1021_000253"
     CDS             complement(22218..23942)
                     /locus_tag="U1021_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001137776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 protein"
                     /protein_id="HEM4710850.1"
                     /translation="MPRLVDLRKKPYCLNEEQIAWVENTLAHLTDEEKIGQLFVNLFF
                     FGGDAFSGNNLSNQELMNRYHIGGARYMNGSPEQVQGLINELQSYSKVPLLVAANCDS
                     GGDGAVKGGTYISSGAQSEASRDPRIPYLAGLVSAREETALGVNVNFDPCVDIVQNWR
                     NTIVNTRAYGTNADDVIAYTSAYLEGLTAERDVIQCIKHFPGDGTEERDQHLVLGVNE
                     LSPEEWDNSFGRVYRHHIEAGVEMIMAGHIALPYYQQRLNPTLKDEDILPATLAPELI
                     QDLLKEKLEFNGLVITDASHMLGMTAAMRREDYVPAAIAAGCDMFLFFNNLEEDFEFM
                     LNGYRKGVITEERLHDALRRILGLKAKLNLHIKQAEGTLLKSADELAIIGCEEHLAWQ
                     REAADKAITLLKDTQKNLPISPETHRRIRLYYLEGEKEGIMAASTEVVDNLKAALEAR
                     GYEVTVNDGTTRIKGKTLQYREEVDLALTVANVIGYGAQNNYRIQWKTAMSNEVPWYV
                     HEVPTIFVSLNYTTHLHDVTMVKTAINAYHHNKNTIESLLDKLEGKDAFYGVPNENVW
                     ANKWQAKL"
     gene            complement(23953..25743)
                     /locus_tag="U1021_000254"
     CDS             complement(23953..25743)
                     /locus_tag="U1021_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-hexosaminidase"
                     /protein_id="HEM4710851.1"
                     /translation="MTHLVDLRKKPYSLDEEAISWIEETIAQMTLDEKIGHLFVNMGS
                     QRTEEYLTGVLNDYKIAAVRYNPGPAADIWEQNYILQTKSKIPLLIAANTESGGNGAV
                     TDGTKIGDEIKIAATTDPRYAYEMGKVAGLEAAAVGCNASFAPIMDLSRNWRNPIIAN
                     RTWGANVDQVIELSKEYMRGIMEHGIVPFAKHFPGDGIDERDHHLSFASNPMTKSEWM
                     ETFGRIYGEMADAGLPGIMAGHIHLPNVEKEMHPERELDDMLPASLNKTLLDELLRGE
                     LGYNGAIVTDASHMIGMTASMSRRELLPTAIEAGCDLFLFFNDPEEDLQWMKEGLENG
                     LLSEERLHDALRRTLGLKAKLGLHLFEGRRQEIMLPKEEALVLIGRDEAKQLAKEVAD
                     KAITLVKAKQEGIFPVNPERYKRILLVEVDGYKGGFGAMINAGKKRAADTLKELLEAR
                     GHQVSIWENTEARIAKLPEEERPAAIANVYASKRPIAEITDNYDLIINLVDVNSGGTT
                     QRIIWPAAKGTPDQPFYVHEIPTIVVSVQHPFALADMPQVATYINAYDGLPVTLEALV
                     AKLAGESDFTGVSPVDAYCGLLDTRIWRGK"
     gene            complement(25792..26592)
                     /locus_tag="U1021_000255"
     CDS             complement(25792..26592)
                     /locus_tag="U1021_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4710852.1"
                     /translation="MMKTEYVFCVDSDGCAMDTMTYKHKLFFGPLAADVFGVKDKEPF
                     LAEWNRVNLYSRERGINRFVGLVKGLEFAGVTGIDNLKNWVATTDSLSNASLERLIEE
                     QPSKDLELALKWSTQVNQAIKHYSGPVLAFIGVHKGLEKLSQLGKVYVVSSANKEAVE
                     EEWTDQGLLDFVTELYCQDRGKKEDVIKLLIEEGDCPDKIMMIGDSPGDLKAAELNNV
                     HFYPILVGREMQSWADLTETIADEFAHQAFTDEKETELIQAFWNNLDD"
     gene            complement(26592..27431)
                     /locus_tag="U1021_000256"
     CDS             complement(26592..27431)
                     /locus_tag="U1021_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000047575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM4710853.1"
                     /translation="MTRVIEFKDKVVVITGAGGVLCGYLAKEFAKAGAKVALLDLNEA
                     AAQVFVDEIAAAGGVAKAYKSNVLSKENLEEVRLQVLADFGPVDILINGAGGNNPKAT
                     TDNEFHEIGLPADTKTFFDLDEAGINFVFNLNYLGTLLPTQVFAQDMIGRSGANIINI
                     SSMNAFTPLTKIPAYSGAKAAISNFTQWLAVHFSKVGIRCNAIAPGFLVTNQNRGLLF
                     DESGQPTARANKILTNTPMGRFGEAEELVGGVFFLADENLASFVNGVVLPIDGGFSAY
                     SGV"
     gene            complement(27433..28533)
                     /locus_tag="U1021_000257"
     CDS             complement(27433..28533)
                     /locus_tag="U1021_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HEM4710854.1"
                     /translation="MKMSFRWYGKKDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLE
                     NILELKKMVEEAGLEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVC
                     YNFMPVFDWTRSDLHHPLPDGSTSLAFLKSDLAGVDPVADDLNLPGWDSSYSKEEMKA
                     IIENYRQNISEEDLWANLEYFIKAILPTAEEAGVKMAIHPDDPPYGIFGLPRIITGQE
                     AVERFLNLYDSEHNGITMCVGSYASDPKNDVLAMMEYALKRNRINFMHTRNVTAGAWG
                     FQETAHLSQAGDIDMNAVVKLLVDYDWTGALRPDHGRRIWGDQTKTPGYGLYDRALGA
                     TYFNGLYEANMRAAGKTPDFGITVKTVGNKEG"
     gene            complement(28547..29947)
                     /gene="uxaC"
                     /locus_tag="U1021_000258"
     CDS             complement(28547..29947)
                     /gene="uxaC"
                     /locus_tag="U1021_000258"
                     /EC_number="5.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronate isomerase"
                     /protein_id="HEM4710855.1"
                     /translation="MSFNDKNFMLKNEPAKQLYGKIAELPIYDFHCHLDPKEIFEDKV
                     YEDIVDLWLGGDHYKWRLMRANGISEAEITGSASKLDKFKAWARTLERAFGNPLYHWS
                     HLELRQVFGVEELLTEENAERLYHQLNAYLQEHQVSPRKLIADARVTFIGTTDHPLDS
                     LEWHKRLAEDSTIDTVVAPTFRPDEAFIEHRNFNPFMKHLEEVTGVAVRDFASFVEAL
                     GQRVSYFAQHGCRASDISFTAISYEEASLEELDDILLARLAGKESGQSSINKWQTAIF
                     RELCRLYKKHGFVTQVHFGALRNNHTGLFEKLGADVGVDSIGDQTCLTVNLNRLLDNL
                     VKENALPKMIWYNLNPSYNIALANTLANFQSNEEGLRSQLQFGAGWWFNDTKLGMIDQ
                     MNAYAEQGMLANFVGMLTDSRSFLSYQRHDYFRRILATYVGQWIVDEEVPEDYNRLGQ
                     LVEAISYYNAKEFFEQ"
     gene            complement(29949..30569)
                     /gene="eda"
                     /locus_tag="U1021_000259"
     CDS             complement(29949..30569)
                     /gene="eda"
                     /locus_tag="U1021_000259"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HEM4710856.1"
                     /translation="MLKQLKENYFFAVIRGKDEEDAKEIARHAILGGIRNIEITFSTP
                     NAATVIKELQEEFSDDSSVVIGAGTVMNVSLAQEAIDAGASFLVSPHFDKEIQDLAQE
                     AEVFYFPGCATATEIVTASQAGCPIIKLFPGGVLGPGFIKDIHGPVPQVDLMPSGGVS
                     VENVADWKKAGACAVGVGSALASRVQAEGYESVTTIARSFVAALEG"
     gene            complement(30691..31407)
                     /locus_tag="U1021_000260"
     CDS             complement(30691..31407)
                     /locus_tag="U1021_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001118301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HEM4710857.1"
                     /translation="MAKPLVEKASERLMELILERGYEVGDKLPNEYELAQDLEVGRST
                     VREAVRSLATRNILEVRQGSGTYISSKKGVSEDPLGFSLVRDRVKLTTDLFEVRYLLE
                     PRIAERVAQFASDEDIARLEEIVLAIEEAVAAGDTKHLELDVKFHCMLAEMSGNLAMT
                     SLMPVINQSIHLINENYSNRQMKSDSLQAHRNILMAIKQRHPVAAYDSMLAHIISVRQ
                     VVLSEWFDKDMTLHGLNDHK"
     gene            complement(31453..>32765)
                     /gene="uidA"
                     /locus_tag="U1021_000261"
     CDS             complement(31453..>32765)
                     /gene="uidA"
                     /locus_tag="U1021_000261"
                     /EC_number="3.2.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-glucuronidase"
                     /protein_id="HEM4710858.1"
                     /translation="YAGIQRTVHLYKRPKNRIEDIVIRTELNQDLTQAVVNVDVKTVG
                     QYDSIRMSILDKEGQEVGLLENGQMVIEHPRLWEVLDAYLYTAKVELFDGENLLDTYS
                     EQFGIRSVAVENGQFFINGKPFYFKGFGKHEDTFINGRGFNEAANLMDLNLLKDIGAN
                     SFRTSHYPYSEEMMRLADRLGIVVLDEVPAVGLFQLFNAALNLTGDSEEAKNTWEVMQ
                     TKEAHELVIDELIARDKNHPSVVMWVVANEPAGHEKGARAYFEPLIQRMRDRDPSKRP
                     VTLVNIMTATPDKDEVMDLVDVVCLNRYYGWYVAHGDLKAAEKGLRQELETWQKLYPD
                     KPILITEYGADTLPGLHSMWDIPYTEEFQVDYYDMNHRVFDSIPNLVGEQVWNFADFE
                     TTVGIIRIQGNHKGLFSRNRQPKQIVREIKKRWTAIPNYHYKRK"
BASE COUNT         9604 a         7598 c         6188 g         9375 t
ORIGIN      
        1 ggtagtgccc cgcctctttc ttcacactaa tcttcatatc atgctcctat tctatccttc
       61 tattaattat accaaaaaac accggtctat aaccgatatt tccattgtct ctattcttta
      121 agcatgaatg ctattcattc cagaggatcg aaaaacggta tcttgaaatc tgaattattt
      181 tttataacat ctttcataga cagtccttac ctttgtttac ctggctcata ctccatgttt
      241 tgtatcccct agcaatgtta gactttctta acacataatg gacattgtca tttttgcaac
      301 acttctatat ttcattcgtc acctaattta ttttaacata tagaacagag tttagtattt
      361 caatcattcc tttctcattt tgtgctatac tagatgtatt gaaaacaagg aggtttatat
      421 gattaaacta atcgctcttg atatggacgg aaccctttta aacgagaaaa aagagctgat
      481 gcagccacag attgatgcca ttcatcaggc tgttgaagcg ggcgtcaaga ttgttctttg
      541 tactggtcgg cccttggctg gtgttaaacc tttcgtagag cagctcggct ttgacactga
      601 ggaagaattt atcattgtca ataacggttg ttcaacgcat tcgacaaagg attggagcct
      661 gattgactgg gaagaactat ctatctctga tattgattat ctttccactt ttattgaaaa
      721 tgatgatgtg caaatctctc tttttgatga ggaagactac ttcgttcttg cagaaaaagc
      781 caatgcacgc gttaatttag acgcaggttt agtaggaatg actcctcaac caattgtttt
      841 aaaagaagcc cagtcaggtc agcatcgctt ctttgaagcc atgttcgtcg gtgaaaaaga
      901 gcatattgat gcctttgaaa atcaacacaa tcctatactc agccaaggct attccaccgt
      961 tcgttcacag gactatctgt tggaaatttt accaaacggt gcaagcaagg caactggttt
     1021 gaaaaaactg gcagaccgcc tcggtatcct cccagaagaa atcatggcta tgggagatgc
     1081 caacaacgac ctggaaatga ttgaatttgc tggacttggt attgccatgg gcaacgctaa
     1141 cgagcaggtc aaggctatcg cccaggacat cacagacacc aatgaaaaca acggcgttgc
     1201 caaagccatt gaaaaacata ttttgaacaa ataaggagac actatgaaat acccaacact
     1261 cttagaccgt tttttagtct atgtcaaaga aaatactcgc tcagatgaac attcgacaac
     1321 cactccttct acccaaaacc aagtcgagtt tgcacagaat atccttctgc ctgaaatgaa
     1381 acgcatcggc ttacagaatg tccactacct gccaaacggc tttgctgtgg gaacactgcc
     1441 tgccaacgac ccaagtttga cccgtaagat tggcttcatc gcccacatgg atacggctga
     1501 tttcaatgca gatggtgtca acccacaaat catcgaaaac tacgacggta acccaatcgc
     1561 tttaggaact tctggctatg aattgcatcc aaaagacttc ccacaacttg ccaactacca
     1621 ggatcaaacc ctgattacca ctgacggtac taccttgcta ggatctgatg acaagtcagg
     1681 aattgcagaa atcatgacgg ctatcgagta cctagtccaa aatcctgaca tcaaacattg
     1741 cgaaatccgt gtcggctttg gccctgacga agaaatcggt gtcggtgctg acaagtttga
     1801 tgtggaagac tttgatgtag attttgccta cactatggac ggtggaccgc tgggcgaact
     1861 ccagtacgaa accttctcag cagctggtgc caagattgat ttcctaggac gcaatgtcca
     1921 cccaggatct gctaaggacc agatgatcaa tgccttccaa atggctattg atttccacaa
     1981 tgcccttcca gaagctgacc gacctgaaaa aactgaaggt tatgaaggtt tcttccactt
     2041 gatgaacatg gaaggcagtg tcgatactgc ttctaccacc tacatcatcc gtgacttcga
     2101 ggaagcagat ttccaagccc gcaaacagct catgctggac atcgctgaaa agatgaatgc
     2161 caattttgac actccacgtg tcattgtcaa cctacacgac cagtactaca acatgaagaa
     2221 aatcatcgaa aaagatatga ctccaattaa cattgctaag gacgtcatgg aaaatctagg
     2281 tatcaagcca ctgattgagc ctgttcgcgg aggaacagac ggctccaaga tttccttcat
     2341 gggcattcca acgccaaata tcttcgcagg tggcgaaaac atgcacggtc gcttcgagtt
     2401 cgtcagcttg gaaaccatgg aaaaagctgt tgatgtgatt ttaggtattg tagcatataa
     2461 ataaacaatt tgttcagact ttcaattgaa ggtctgattt tttctgaaaa tctttcaaaa
     2521 tttttgaaaa accacttgta ttattgaact aatactgtta taatagaacc atcaaaaaga
     2581 aatggagttt taatatgaca gaagaaacat tagcacaggg aattctcatt ggcatttggg
     2641 gtacaacact actattttca tttatttggt atattcttgt tgctatttcc aactacatcc
     2701 tcttcaaaaa agcaggctac gctggttgga aatcattgat tccaatctac aatctctata
     2761 tccaacaatg catcgccttt ggctatgaaa aaagatggtt cattctattc ttactgattc
     2821 cactagcagg accattatat ggcatctatc tcgtttacaa ttttggtcgt agcttcggtt
     2881 tatcagctgt acaagctatc ttctatgttc ttcttacacc tatctttaac ctctacatcg
     2941 cttttaatga tggaagtcgt taccaaggtc cacaagaatt ctttattgat taatatacaa
     3001 tcaagccccc gcacacgcgg aggctttttt aaacgaatag aaaaataaga agaaccatca
     3061 tgactaggct gaccaaaata gataaggagt taacattggc aggttcagct gagcgactac
     3121 ctaactttaa tgcataaatt ggggacatga ctgaaatcgg agagactaga cagaccagca
     3181 acatgatttt catcgtttta tcaataggta gaagaaaata aatgactcct gctattagaa
     3241 tattcgcacc cagcctcaaa gagagaagat aggccaatcg agtaatttct tgccaattca
     3301 attttaaatc aagcaagatt cccaacatga gcatggctaa aaaaggattg gcgttactgg
     3361 ctatcgtcag cgcagagata agttcgcgtg gaagtttgat agagcagact gctaacgata
     3421 ggctaactag atagactact agtggaactg agcttgaaag attctttata aaagttgcaa
     3481 cggtcattct ttcctgctct tcatccacac cagctgcgat actgtaattc ccccacctag
     3541 aaccaggatt gcattccccg catcaaatac gatgacgctt aggagactag atagcggaaa
     3601 aaaagcttgc acaaatggga gtgtaaaggt tccgatatta tagcctgata actgcataag
     3661 accgactgaa gtctgttgac cagacttctt cgcttcccag tatcccacca tatccaaaaa
     3721 aagattacaa agaatcccta atatgaaggg aacatataaa tctatagata cttgggctgt
     3781 cgctgaagct acaaggagag aagctggtag cgtaatattc atcactaagc tagaaaagat
     3841 tcttgcatct tcccttcgaa caatcccttt gacttttaat gtataaccta aaccgataac
     3901 aaagataaaa ccgagagcac gagctaataa ttcaagttca ttcatgaaac tagtatagca
     3961 tatagaaaag aattttgatg atatataaaa attttatata atcgcttgat ttcgctaaac
     4021 aataggtata taatttatat ataaaataat tacataaaga taaagaggtg agtttatgta
     4081 ctaccccgta tcctctatct tgattgaatt tctggtctta gccatcgtgg aaaagcagga
     4141 ttcctacggc tatgaaatca gtcaaaccat caagatagtt gctgatataa aggaatccac
     4201 actctaccct attttgaaaa aattggaaaa ggctggctat gtcaccacct atacccaaga
     4261 atttcaaggg agaaagcgga aatactatac catcactcct gctggacgtg aacacctccc
     4321 cttcctgcag ggtgaatgga atagctacaa agaccatatt gacggaatta tagaagggag
     4381 cttacgaaaa tgacacgcgc tgattatttg aaccaactgg aacaagcatt atttcaactt
     4441 catccaagtg ccagacagga ggctttagag tacttcaatg aatactttga cgaaaaggat
     4501 aacgacgagg aagctattat agagctagga acacctgatg aagcagcaaa ggaaatcatt
     4561 gccaatctac ctgaagatgc cctaatcacc aaaaaagacc aagtaagtcc acattcttct
     4621 aaaccatttg atttcgattt tgactttgac tttcaatttg actgggagaa ttttttcaac
     4681 aatttcaaac actcaaccta tcaagctagg gaaagaatgg aattgaaggc gaaatgcgaa
     4741 gaattacctg agttttcaaa tctacagatt ttgctcgaag atcaggctct gagtgttcaa
     4801 acttatgaca gagaaactgt cttattgcac aatcccgttt ctgaagatgg gagctatcag
     4861 gcttttgact atcaactggt tcaggatagt ttgtacctaa cgagtaagcc ttcccctaat
     4921 cacctctact tctcaaacaa tcaagctagc tctgctattc tcaaaatccc taaaaaactc
     4981 ctgcccctta ctagtctcaa tctgaaaacg acagatagca ggctgagcat ggcggatgtg
     5041 caggcgagcg aacagctagt catcaatgca aaagatagca gcatcagcat gacgaaagtg
     5101 agctacccaa gctctgctct acggttagaa gacgctacac taactatctc agatggacag
     5161 ctgagcgagt taaaattgga agccagcgat gctgttatca ctctctcaag catgagcctt
     5221 tcagatgcaa ggataacatt agaagactgt gtctggaagt tgaaggattt tgtccttgaa
     5281 aagagcctta actgtcaggc tgaagattct gtcttaacct atagaccgag tacggacatc
     5341 agtttggaca tctgggagga agattctagc cttaaacttc taaaggataa ggcgtttaca
     5401 atgatgaaag aggatgacat cactcatctc agctataagc aagaaaatag ccctgctcag
     5461 ctagttattc attgtcaaga ctgccagctt agcataggat aaaggaggtt cctatgaatc
     5521 gcaaggaata tttacagaaa ctcgagaaat atctcaaaaa tttaccaaaa gaagattttc
     5581 aggataccat agactatttc aatgaatatt ttgacgaaaa ggaaaacgat gagcaagcca
     5641 ttaaagaatt aggcagtcca aaagaagccg cctatgaaat cctagccaat ctctatgata
     5701 aagagaagac tgaggataag ccaaataccc gcaatatggt ctggcttacc atcctctcta
     5761 tccttgccgc cccaatcggc gtccccctag caatcacctt ggtcgccctc ttcatcaccc
     5821 ttctcctaat catctttagc ctctttctac tctttatctc actctggatc gtcctcctca
     5881 gcctggcgat agcccagcta ctcctcgcct ttgacctctt cacactatca tggtctacct
     5941 ccctcctctt cacaggcctg gccctcgtct gcttggccct cactctattg ggtagtaaat
     6001 tcactctaga ccttggaagc aaaaccttcg tgcttgtttt acattggata caaagaaaaa
     6061 tccgcaaagg aggctactat gaaacagatt aaaccattta cgaaaattag tctgagcctg
     6121 ttcactcttg gaacaattct cagtctcatc ggataccttg ctggcggttg gacaaatatg
     6181 aaaactgttg cagaaaacta ttttcagccc caaacagcca gttttagtaa cattagggct
     6241 atagaagtta atgaaaaact gtccattatg ccctcgcctg acaaccaatt tcacctccac
     6301 tactaccgaa atcagcacaa aggcattgac ctcctcagtc accaagtcca agatggaaaa
     6361 ttaaccattt ctagtgccta tcaaggtatc gttacttatg atggtttact tgaacctatc
     6421 ttaaatcttg tcaatgacca gaatgttgcc tactaccaac ctgtcttaca ggtccctaaa
     6481 aatagcacaa tcgaatcact ctcagggagc attcaaggag atgtctatct ggataaagtg
     6541 actattcaag atttccaact ctttgttgaa aatggtgaca tgttgattga aaacagtcac
     6601 atcagcctta ttaggctatt acacatcaat ggagaagtag caatcaatca gtccacatta
     6661 acaagtccag cggacatcac cgatactacc ggaagtattc taactgttga ggatggtgat
     6721 tttaaagcag aaaacctaaa actagaggga aagcatggca tcagtaatta cgatggttca
     6781 atcgacattt ctcttcatcc caaaacaaaa actgacatcc atatagatgc cagtcaaaat
     6841 aatctgggaa ttgaccttcc aacctattcc aatccccaag ccactaatta cctctatatc
     6901 tctacactag atggagaact gaatattcag taattgcaaa aagccctcct cacggaaggc
     6961 tttttaactt atttaaacaa caaaatagaa atcaaggcca agatagctgg tccaccttgg
     7021 gttaagatga tttttggact agaagtcgct gctccgtagc ctgctgctcc aataacaaac
     7081 aagacaaaaa tagttgtcac ttcaaggttg cctgtgaaaa ttccatagat aaggaagacg
     7141 gccaacaaac cattatagat tccctggttt ttaaataggg ttgtcacaga cttacgttgt
     7201 aattcttcct tctccatatt gaatacgcga ctagtagagt ctgaatgggt cgcaaaggtt
     7261 tccaaataca tgatatatag gtgctcaata gctacgatac tagctagaat agtggtaaaa
     7321 atagacataa tgtctcctct caaaaaatta tataggtaga ttttgcaagc caatcaacag
     7381 tttatcaaga gtggctagga attgctcgct ctcctcaaca gttagaatct gattcatcga
     7441 agttttgata gcttggtggt gggcagaagg attcgtgatt agcgcttctc tagcctgctc
     7501 agttggccag acaagtactt ctctctgatt gtcaggattt cgcttgcgaa tgatatagcc
     7561 gctctcttcc aacaatttga gatgacgcgt aaccgctgcg cggtctatct gaagccgctc
     7621 ctgcaaagcc aactgatgca ggggtgcatc ttttagtaat gtttgcaata ttgaatagcg
     7681 tgtcaaactg attcccaact gcttttcaaa aagattggaa atcgtctcat ctgccacttt
     7741 caatctgtat aacaaatctt ccatttcttg cattatctac ctcttttgat tgattaatca
     7801 atcattgata agtcaattat actataatcc gaacaatttt caactatttt gcctctctat
     7861 aaaaaaatat gttgcctaca cctatatttt gttataatta agaaaataac tagcagaggg
     7921 atgggactta cttatggaaa acactcctag actaaacttg gtcatagacg tgctcatgct
     7981 cgctggtgcc attttggcac aaagcggtgc agaaattcac cgagttgaag ataccatgat
     8041 tcgtattgca cattcacacg gaattgaaca ggctaatgtc cttgccatcc ctgctgctat
     8101 ctttttctcc atcgaccata cgaatatttc gcgtatgaaa cgcattgtca attcaaatta
     8161 cgacatgcag aaagtttgtg acgtcaacca aatctcccgt tccctagcca atgaagaaat
     8221 cagcctagaa gaagcttgga gccaattaaa tgcaatcaaa caacaaaagc caccttataa
     8281 caatatccaa ataaccttag ctgccgtagt agccgctcca ttttttacca tcatgttcgg
     8341 aggttctctt ttagatgcag caggtgctgt cctcgcaaca gctttagctt tccctatctc
     8401 actaattgtc gagcgctata ttggaattga ttttgtcacc accttcgttg gcgcctttgt
     8461 cttctcactc acctcttatt tattaagcgc aaccactact ctccccatta atcctaacct
     8521 gattaatgcg ggggcagtca tgccttttgt accagggatt gcttttacaa atgctgtaag
     8581 agacctcatg accaatcata tcaatacagg gatgaccaaa tttttccaaa ctgcgcttat
     8641 tatcttatcg ctcggtgcag gtacaactgt ggcctttatg cttgtgaggt aatctatgac
     8701 accagttcac ttcttattac aggcactcgc ctcttatatc gctatcgcag ccttcttaat
     8761 tgttctcaat gttcaaagaa aaatgctggt ccctggtgga ctcctaggca tgcttgtttg
     8821 gcttatttat cttttactat tggaaccaac aaatgtcttg attgctacct ttttcgcggc
     8881 aattatcgga tcctgtgtca gtcaaatcat gagtatttgg ttaaaaacac cctccgtcat
     8941 cttttcattg gctatacttg caccacttgt tccaggctat cgagcctaca tgaccacgac
     9001 ttatttcgtt tctggagacc acgctcaagc cctaaccaat atcactaccg tcttaacttt
     9061 agccttagtc attcccatcg gtatggccag cggaacaata ttattacgcc tttataaggt
     9121 tcttcgaacc ggcaaaaaag cagcctaacc ccttgaaaat aaggggcctt tttgttaaaa
     9181 tgaaaactta tcaaaggaga tgctatgaac caaaacgtaa ccaatctaaa acttgctgaa
     9241 cgtggtgcct tgctatctat cggtgcctat attgtcttat caggtatcaa actcgttgca
     9301 ggacagctct ttcattcaga tgccttacga gcagatgcct tcaataatat ttctgatatt
     9361 atcggtaata tcgctgtact tattggacta aaaatggcac agaaaccagc tgataccgat
     9421 cataaatttg gacactggaa aatggaagac ttggcaagct tgattacatc cttcatcatg
     9481 tttgtcgttg gtttccaagt actctatgat accctccaaa agctaatcag caattcttct
     9541 gtcgaagtag acattatggg ggctattgtc ggaatttttt ctgcactagt tatgttagct
     9601 gtttatttat ataataaccg cttggcaaaa aaagtacgtt ccaaggcctt agaagcagct
     9661 gccaaggata atctatccga tgcagtcact tccataggaa cttctatcgc gatctttgct
     9721 gcggctttca acctccctat tgtcgataaa attgcagcca tcatcattac cttctttatc
     9781 ctaaaaacag cctacgatat ttttatggaa agcttcttta ccctatctga tggatttgat
     9841 gaaaacttat tgaaaaagta cgaggaagat attctcaaac tcccaaaaat cgtttctgtc
     9901 aaatcacaac gtggtcggac ttatggagcc aatatctacc ttgatgttgt tttagaaatg
     9961 aatccagact tatccgttta tgaaagtcat gaagtgactg agcaggttga gcaactccta
    10021 acactcaaac atggagtttt tgatgtggat attcacgtag aaccatctga aattccacac
    10081 gatgagatgt atgagcatgt gtacgacaaa ctcttccgtt ttgaaacaga gatacaagca
    10141 catgctaatg ggtatgaaga attgattgac gaccagtatc tcttaattga tgccaaaggc
    10201 cactaccgaa ataaaactca gatacttgcc gaccacccca tccaaacgac gtatttatca
    10261 aattaccaaa tgacatctat tagccataaa tcaaaattag ttacgtttga aattggcgaa
    10321 tatgttcata cgtcactttg gcgccgtcat gaaaattgga ctgttatttt ccatcaaatt
    10381 tcaaagaaac aagcctctca gatcgaagct actgaaaaaa tctctgattt gcataatcca
    10441 taataaaaaa taggaatttt ccctggatta tagggagaat tcctattttt taaccttccc
    10501 tttgagctat tatcagtctt ttatactcaa tttgtagtta tttagttttt gtttagtata
    10561 tgataaaagc taaataacta tagaagatta gagcttactg ttttgggatt tcattgatta
    10621 ttatattata aagaaaaagc ctctacccga ataaatattt gagtagagat tttaactgaa
    10681 tgatattgcc cattggcagg gcttttattt gtttgttaat caatcctaat atagcaaagg
    10741 tgccaacagt aaaatcacaa ataaggctaa caaatgccca actgtcacta ggataaatga
    10801 atacttgagt ccacgtttca tacttaattt cgaaagattg tggaaggtaa tcatcacgcc
    10861 agactgaggc acaactgtca agatagctga tgcaacaact actacacgat gcagcaactc
    10921 tggattaatc cccatttcta aataggcagg aaggaaatta cttgaagcaa tacctactgc
    10981 accagaagat gaaccgataa taccactaac caatgctgtc gaaacagata aactaatcag
    11041 cggcgatcct ggtatttgtt gaatccattc ttgaatgact gcaaaacctg ctgacaaggt
    11101 taacaccgtc ccaaatgcta ctgtactaga agttgcaaaa gcaggcacta tggatgctgt
    11161 tgtcgcagca ttcaaaattt ctttttgatt tggcagatat ggataaaaaa tcaaggctga
    11221 tagaaggata gagaccaaca atccgattgc taggacattc ggagttttac tcattaggaa
    11281 aatcgtccca ataagactga atagaggcaa gactgataaa aatagatttg gtgtcttatc
    11341 agctaccact actgcagttt catcctcttc ttctgtatac gtctctccat ttgctagact
    11401 tttcttgagg cagtaggcca tgtagagcaa gccaaatact aatagcgtca agctggctgc
    11461 caaactgata acgggtgccg cggtcaagct agttcccaaa acttttgtcg gaataacatt
    11521 ctggatggaa ggtgccccag gaagagttgt catcgtataa gtacctgctc ccaaaaagac
    11581 aggaatcgga aaaagtgccc agttgatatt caactcttta aagagtgggc gtgaaagggg
    11641 aagcaaggta aaaataacta caaaaatact cacaccacca taggtcagaa tggaagcaat
    11701 caaagtgatg gctaacaaac ccttataggg actatctttt cccattactt tcaaaatgct
    11761 attggcaatc gtctgcgtag ctccacttgc ctccatataa cgtgccaaga tagaccccaa
    11821 cataaagatg gcaaaattat taatcaaaaa acctgctaag cccgccatat aagactgctc
    11881 tttgcccaac ataacttcca aaacattcat ctgattggtc agaatgatga ttaaactagc
    11941 tagtggtgca gcaatgataa catgtaaatt ttttgatgtc caataaataa tggctacaat
    12001 agccaataaa actcctaaag ttgctaaaat tgtcataaaa ctcctttatc tattctatcc
    12061 tctaataaac ctagtatcag aggcaactat ttgaaaattt ttatatcttt ttgttcccct
    12121 agttctgcaa gcaagtccga taccactttt ttcaaaattg ggtgacggta atcagaagca
    12181 atctcagcaa gagggttgag aacaaatgct ctttcatggg cgtagggatg ggggacaatc
    12241 agattctctt cttgaatctt ctcctcatcc caaaaaataa tatccaaatc aatggtccgt
    12301 tgtccccatt tttcaatccg tactcggtcc aactcttgtt cgatgttctg gcaagcgctt
    12361 agaaaatctt gagcagacaa atcagtatac acttgacagg ctagattgag gaaatcagcc
    12421 tggtcggtct tgccccaagc tggagtttca taaatattgg aaactaagcc aagctggcaa
    12481 cctggatgac tggctaattt gtctagagct gcctgtaaat aggcttgccg attgcccatg
    12541 ttccctccga tactgagata ggctagatgc ttcatggtcg ttcacgctcc aattcaattc
    12601 cgacagaatc atagtgtcca gcaataggcg gattttcctt gtaaatggcc aagcgaatct
    12661 tctccacctt tggaaattga tcaaaaagct cctgacaaat aacacctgct accttttcta
    12721 taaggatgta gggcttgcct tccacaactg ctttaatggt ttcaaagacc ataccatagt
    12781 gaactgtgtc ttctaaattg tcagtttgtg aagctgctgt caggtcaaca aacaaatcac
    12841 agtcaaccgt gaaaatttga ccaagaactt gttcttcttt gaaggcacca tggtagccgt
    12901 agaaacggca tttattaagt gaaatcttat ccatgttgac ctccagaagt caattggtcc
    12961 caaaccttaa cgatatcacg gttggcagcg acattgtgaa cacggaccat tttacagcct
    13021 ttttgaactg cccaggcaga caaggctgcc gttgcttgat cgcggtcagt cggtaagcta
    13081 ttgcccccaa gcagataatc caccacgcgc ttacgagata ttccaaatag aacgggataa
    13141 ccaagagcag taatctgttc caaaccttgt aagagatcaa ggttatgttg gacattcttt
    13201 gaaaagccaa atcctggatc caaccaaatc tggtctgcgg aaacaccagc atcaagtgct
    13261 gcttgggcac gctcagctag aaagtttttg acctctccaa caacatccgc atagctttcg
    13321 tctttctggt tgtgcataag aatgattggt accttgtact ccgcagccag ggccaacata
    13381 tctccatcat aaagtcctgc ccagacatca tttaaaatat ctgcgcctgc ttccaaggct
    13441 gcacgtgcag ttcctgtttt ataggtatcg acgctgacaa gacagtcata gttttctttg
    13501 atagcgcgga taatcggaac cacgcgagca atctcgtctt cttcagacac aaatgttgca
    13561 cctagccgag tggactcacc accaacatca atgacggtag caccctcagc caacaacttt
    13621 tctacttgta ccaaggcaga ctccacctca ttatagtgac caccatctga aaatgaatct
    13681 ggcgtcacat tgagaatccc cataatggtt acttgattcg ctaactgttc gattgacata
    13741 gaacctccta tttattgtga atcatggaca agagttcacg gcgcaagatg gcatcttcct
    13801 tgtatttgcc aagagcaact gtggtcactg tcttactacc tggcttgcga ataccacgca
    13861 tgctcatgca catgtgctct gcttcgacca tgacaaaaac accttctggt tcaagggcat
    13921 cttgaagggc atgggcaacc tgatgggtca agcgttcctg caattgaggg cgacgacttg
    13981 ctacctccac tgcacgcgcc aatttgctaa ggcctgtcac acgcccctta ctcggaatat
    14041 aagctacatg ggcaatgcca taaaagggta ccaaatggtg ttcacacata gaatgaaaag
    14101 gaatatcctt gaccaaaaca acctcttcat gaccttctga aaagacagct gtaaattggt
    14161 ctttgggatc ctcttctagg ccgttaaaca tttctaaata catcttagcg acccgtttag
    14221 gcgtatctaa taaaccttca cgattcgggt cctcacccaa taattctaat aattgataaa
    14281 ttgtttgttc gatttgttct tgttttgaca tagtgcctcc taaatagttt gatgttctta
    14341 ttatacctca aaaactgttt tcagaaaagg gctttcagta tgctaatcct aaaactgtcc
    14401 cctatcagag caacaagcag gtgtccctac tcccaccttt gtggtataat aggataaatc
    14461 aactacaagg agcctctatg accaagaaac ccgtccaact cgctacgatt tgctacattg
    14521 ataatggtaa ggaatttctt ctccttcatc gaaacaagaa agaaaacgat gtccatcaag
    14581 gaaaatggat tggagttggt ggcaaactag aacccggcga aacgccacag gcttgtgcca
    14641 ttcgagaaat ctttgaggaa actgggctta ctgtaacaaa gcatgctcta aaaggagtga
    14701 taaccttccc agactttact ccaaacacag actggtacac ctatgtcttt aagataactg
    14761 gttttgaagg aagtcttatt gactgcaatg aaggtgactt agagtgggtt ccctatgacc
    14821 aagtcttgtc caaaccaact tgggagggcg accggcattt tcaagaatgg ctattagagg
    14881 acaaaccatt tttttccgct tgcttccgct atgatggggg caaactgctt gattacagtg
    14941 ttgattttta tgaagaataa gctaataaaa aacgaaaaaa gccttggaaa tccagggctt
    15001 ctttgatatt acaaatactt cttcttcggc atttgcttgt ttaatacgac atccaaggga
    15061 ccggctgaca atactgtatc taccaaacgt ttatctgtaa ttttcttatc aagaaggact
    15121 tgatattcta aaacaagtgc ttcttttttc tttttgtatt taagggataa taaatcagac
    15181 tgcttgcaag atttaccaaa ttgattttca aaaaattgat cgtagtcaaa attcattggc
    15241 actgtcacca agagatgacg acgattttga ttgacttggg caaagctgat attttcaaaa
    15301 atcaagatac aagcagatag gatgaccgtc atgaagacag ccaaacctag gaagcccatc
    15361 cctgtcgcta gaccgattgc catcgctaag aggactgcaa gcatttcctt tgaagaacct
    15421 gctgctgagc ggaatttaat tagactgaaa gtccctgcta ctgcaacacc cgctcctaag
    15481 ttaccattaa ctaatgcaat aataacagca atcaatgccg gcattaaact tagtgtgatg
    15541 acaaattcct ttgtataatt agatttatat ttataaacag ccgctaagag tacccccatg
    15601 gatagactaa ctccaaaaac catggacatc tgcgctaagg taatattgct attggcagtt
    15661 gaaaagatac tattaaacaa ctgcatgttg acttacttcc tctccagtga tgttgtgggc
    15721 aagcttatag gcattgccat attttgaaaa tgattgcttt tcgatttggt atttttcgag
    15781 cagggctacc aaccagtctg gtcgttcttc tggaactttt acttccatga ttactttggt
    15841 tgggtctaat aggttcttac caaatttacc ttccattgca tccacatcgt agtctcgata
    15901 aagtaagttc ttatcgattg tgagacgaac ttttttgtct tcgattcctt tataggatac
    15961 gcgatcgtag tagatataca tcttcggctt aatagtcccg tagcgttctc tcaacatttc
    16021 gagttctgag tttaccttat catccttgat tgtggaatca atcactccat tttcgatata
    16081 atttgctaca gaaacagggt ttgaagttaa acggtattta tagccaattt tattttcttt
    16141 tttcttaatt tcaagaaagg cttgactcga ttcagatggt atcgcatcat agacacgcat
    16201 acgaattttc tcacgtccat tctttttggc aagtgaatct tgaatcatat caaaatcttc
    16261 attatcaaag tagatattgg taatcgttga tgtcgcaaac tcatctgcca tcatatactg
    16321 acgaagttcc ttttctaaaa gttcaaaagt ttttttatca acgatatatt tagtctcttt
    16381 acgcttaaac tgcttttgta cgattcttgt tttcattatt gtgcctcttc tatcctaaat
    16441 ttttacaggt ccctgtcttg tttacaagat atagtctacc gacttagctt taaatgaaac
    16501 tgaaaataaa attaaacaaa acttaaactg caataaagtt gaaattcttt tgtcacattc
    16561 taatctatgc tacaatagtc ctatcaatag taaggcaagg agaaacccat gtacgaattt
    16621 gtcctagaat acggctcttt ccccgtaaaa ctcatcgacg gttttgtcaa caatcgctca
    16681 gaaattcctg attttctcaa agaagacgaa gaaatgattg cccgcttgaa cgagatcaac
    16741 gaactcttcc accaactttt cttaaccatc gaatgcaagt ttgactatat cgggaaacaa
    16801 ttccctgaca agatcgaaca actacgagaa ctctatcatc ccctggcaga cgatttacta
    16861 gccaagtatg gcaaccagat agagttgaag attgaaccct ttattttgta agacaaaaga
    16921 gatgaccgca atcatctctt ttcttctatt ctgtattcca aaccatactg gtcacgcgat
    16981 aggtaaccat aatccaccaa gtagcgtctc aatatagcat agtcatcata aatctcagct
    17041 agaaaggcat taacttcttt ttctgtgaat gccgagcctt tcttagccaa ctcttcttgt
    17101 aaataggcaa acaagacctg cttacttttt aattttttag gaataacgat aagcttgcct
    17161 tctcgaaaaa atttttcttg aatatcttga gtgttcatac ttccctccaa aaaatcctag
    17221 cccgctgact aggatttcac aagatttaca tgttaacgga tttcagctcc aagctcaacc
    17281 aaagccttac taattttctc catatactta gccacttcct catccgtcag gctatccgca
    17341 ggattttgga aggtcaggtt ataagccata gacttcttac cagcctcaat attgctaccc
    17401 gcatagacat caaagagggt cactttagtc aagcgtttca cgccagcacc agcaatggca
    17461 tccaggacat cctgatgttt aacatcactg ctcaagagca gggcaatatc acggctaacc
    17521 gctgggaatt tagagatttc ggtaaatggc tgagcaggct ggagagcttc ttcaatcgca
    17581 tccagattga tttcagccac ataggtctca ggaataccgt agtccttggc cgtttgagga
    17641 tgtacctgac cgacaaagcc gatcacagcc ccattcaaat ggatttcagc tgtacgacca
    17701 gggtgcaagg cagcaatctc actagtcgcc acaaagtcaa cagccaactt ataatgacca
    17761 aagattgctt ccaaaatccc tttggcatgg aagaaatcaa ctggtacagc tggtgtctgg
    17821 aagtctttct cagctaccaa accagtcaag acaagggcaa acttattgat ttcttgtggc
    17881 aggtcctctt ttggattgcc agactgttca aagattttac cgatttcgta aagagccaag
    17941 ttcttgttct tacgagccac attgtaggcc actgtgtcta acataccaga caccatgttc
    18001 tgacggaggg cagagcgatc aacagtcata ggccacatga gttcggtgac tgtggttgga
    18061 cgagccgcaa actccacagc cttttcaggc gttgtcagag cgtaagaaat gatttctgtc
    18121 agacctgcac cttctgccag gctacgaact tgacgacgga tgttctgggt cagggtcaac
    18181 tcacctgctg ttccgtcctc tttcggaaga gtggtcggca gattattgta accatagata
    18241 cgagcgattt cctctaccaa gtctgctgga atgcgaatgt cccaacgacg acgcggtact
    18301 gctactgtaa actgacttgc atcgccagtt gtttccatac ctaaacgacg gaaaatatct
    18361 gcgatttggg catagtccag attggtcccg agcgagcggt tgacgtaatc aatggtcgct
    18421 gtgactggga catccgaagt atccacgctg cccgcagaaa cgatgccaga caagacctga
    18481 ccgccagcca gttccgtaat catagcagcc gctgtatcca tagcttccgt caaagttgcc
    18541 acgttgatgc ctttttcaaa gcgagaagag gactcagagc gaaggttgag gcgacctgag
    18601 gtcttgcgga tagacttgcc gtcaaaaagg gcagcttcca gcacaacggt ctgagagttg
    18661 ttgtcaatct ctgtgttagc accacccatt acaccaccga gggcaaccgc cttgtcccca
    18721 acggaaatga cgatgtcatc ggcaatcaag tcacgctctt caccgtcaag cgtcaccagg
    18781 ctctcaccct cttttgcctg acgagccacg attttcttgc cgtcgaactt gtcaaagtca
    18841 aaggcgtgca ttggctgacc gaagtagagc aagatgtagt tggtgatgtc caccacattg
    18901 ttgagcgggc gaatacctgc gttcatgagc aggttttgca accactgcgg gctcggtgcg
    18961 atagtcacat tttcaataac acgggccgtg taagcagtca ccttgtctga ctcaatggcc
    19021 acttcaatca catcgctggc cttcttgtcg ctttcatcca aggctacagg cttaaagttg
    19081 accttgctgt catagatagc tgccacttcg tgagccacac cacgcataga gagggcgtcg
    19141 gcacggtttg gtgtgatgga caactcaata atctcgtcgt cgaggtcaag atatgaaaag
    19201 actggctcac ccacgactgc atcttctggc aggtggtaga taccgtccgc atagactttt
    19261 ggcacaactg agtcggacac gccgatttcg ctcaatgagc agagcatacc caaggactca
    19321 actccgcgga ttttgccttt cttaatcttg tagttgccag cgatacgagc tcctggcaga
    19381 gcgacgatca ccttgatgcc aggcttgaca ttcggagcac cgcaaacaat ttgcgtgatt
    19441 gcttcgccca catttacctg acaaatattg aggtgagtat ctggaattgg ctcagcagac
    19501 acaacctgac cgacaaccaa cttagaaagg ccagcactct tttgctcaac cccttctact
    19561 tcaattcctg ttgttgacat tttttcagac aagtcatggc ttgtcgcatc aaagtcaacg
    19621 agttctttta accatttgta acttactaac atattatcct ttctggtgca aaggccgttt
    19681 cagtagccaa tccacatcaa tcttatcacc gactgcaaat tcatgctggc caaatttttc
    19741 aaatccgtat tttgcataga atttctgtgc tttgtgattg tgttcccaga ctcccagcca
    19801 gacccaatca cagttagact gctctgcttt ttccaaagca aattcaaaca agaccttccc
    19861 aagaccgcta ccttgaaaag cccgcaagag atagatacgc tgaatttcaa aggcattttc
    19921 cagctcctgc tccgtctggg cagaaccctg gttgagcttg aggtaaccag ctatctgata
    19981 atcaactcta agaaaataat actggcagtt gggatcagac aactcccttg tcaaaacctc
    20041 caaggaataa gacaactcaa agaatgcctc cagttccttc gggtcattat cgtgagcgaa
    20101 ggtctctgca aaagtctgct tagccagctc ctgcaaaaca gaaacctctt ccaaacgtat
    20161 aggatcaatc tgcatctcat tgcctctcat ttctaactgg gctaggtaaa ccgctagaac
    20221 ggctaccctt tctctcaaac aacaatctac taactttatc ggattacgac ggtatttcaa
    20281 gcgaaacgat atttttcgct tgaaatccta gtaaggtagc taggaaagtc gcttaatggc
    20341 gatttccgtt cacctattcg ttcatggtta cgacggttca aggttgaaaa cgacatattt
    20401 ttcaaccttg aacctagtga ggggagtagg tagaccacta gagcagctac cgtttctctc
    20461 aaacaacaat ctactaactt tatcggatta cgacggtatt tcaagcaaaa cgatattttt
    20521 tgcttgaaat cctagcaagg tagctaggaa agtcgcagag cagcgattcc cacaccttaa
    20581 atagttcgag attacgacgt tctaaggttg aaaacgatac ttttttcaac cttagaacta
    20641 gtgagacgat tagacagttc gccatagcga ctgttgtctc ataaataggt gcttcagcac
    20701 catttatgag tatcggatta aaactgctcc gagaatcgta catcaccttg atagaatcca
    20761 cgaatatcgt tgataccgta acggagcatg gcaatgcgtt cctgaccaag accgaaggca
    20821 aagccagagt acttggttga gtcaatgcca ctcatttcca atacttgcgg gtggaccatg
    20881 ccggcaccga ggatttcaat ccagcctgtt ttcttacata cgttacagcc gtcaccaccg
    20941 cacttgaagc aggaaacatc cacctcaaca gaaggctcag tgaatgggaa gtatgatgga
    21001 cgcaggcgaa tctgacgctc ttcaccaaac atcttcttga taatcatttc aagcgtacct
    21061 ttgaggtcac ccatggatac attttcaccg acaaccaagc cttcaatctg gtggaactgg
    21121 tggctgtggg tcgcatcatc cgtatcacga cggaaaacac gtccaggcga aatcatcttc
    21181 aaggcacctt tagaaaaatc atgttggtcc atggtacgtg cctgaacagg cgacgtatgg
    21241 gtccgcataa ggatttcttc ggtgatgtag aaggtatcct gcatatcacg cgccgggtgg
    21301 tcttttggca aattcatgcg ctcaaagttg tagtagtctt tttccacttc aaatccgtca
    21361 acgatttgga agcccatgcc caagaaaata tcttcgattt cttcagaagt ttgagtcaag
    21421 acatggcgtt ttccgacctt gacttgacga cctggcaggg tcacatcaat ggtttctgat
    21481 gccaattgtt gttggatttt tgctgctgca accttttgag ctgtctcttc aaaagcagcc
    21541 gtcagcacat cacgcacttc attgacctgc ttaccaacga ttggtttcat atcgttagac
    21601 aggtctttca aacctttcaa taagtcagtc aaggaccctt ttttacccaa aaccgcaaca
    21661 cgcaggtctt gtagttcttt ttctccttgg tgctggattt cttttagctt ttcaagtgtc
    21721 gtttggctta attcagccaa ctgttgttca atgtttgaca taattcctcc aataaaaaaa
    21781 cgcatgacac cactcgtatc ggagcgttgt cacgcggtac catccgtttt catctgctag
    21841 gcagacctta gttctatgaa cctgtattca caagtgaagt gcttgcacat aagagatggt
    21901 tttccgctaa tcaaggctgt tttttgaggg aatactgact gtattttgaa aaaaactaac
    21961 gatgagtagc tgaaaaacta gccttagatg gaagtgctga actgtgaata caggttctaa
    22021 gtccttgtgt gagtgaattc gaccaacttt cactgattga gcttgcagtc acggctcaac
    22081 tccctgggca gtttccatag gtgtactagt ctcacagact cctattcaat taagaatatt
    22141 ctatcaaaaa taagaaagtt tggcaagaat tcttcctaga aaactccctc tatcctagga
    22201 tagaaaggag tttagtttta tagttttgcc tgccatttat tggcccaaac attctcattt
    22261 ggcacaccat agaatgcatc ttttccttct aatttatcaa ggagggattc gatagtattt
    22321 ttattgtgat ggtaggcatt gatagcagtt ttgaccatgg taacatcgtg aagatgggtc
    22381 gtatagttta gtgaaacgaa aatggttgga acttcatgta cataccaagg aacttcattg
    22441 gacatggccg ttttccactg gatgcggtaa ttattctgcg ctccatatcc aatgacattg
    22501 gcaacagtca aggctaaatc aacttcttct cggtattgca gcgtttttcc tttgatacga
    22561 gtcgtaccat cattgacggt cacttcataa ccacgcgcct ctagggcagc tttaaggtta
    22621 tcaaccactt ctgtacttgc cgccataatc ccttcttttt caccttctag gtaatacaat
    22681 cggattctgc gatgggtttc tggactgatt ggaagatttt tctgtgtatc tttcaacagc
    22741 gtaattgctt tatctgctgc ttcacgttgc caagccaagt gttcttcaca gccgataata
    22801 gccaattcat cagctgattt tagtaaggtt ccttccgctt gcttgatatg cagattgagt
    22861 ttggctttca gacctaaaat gcgacggaga gcatcatgaa gtctttcctc agtaatcact
    22921 cccttgcggt agccattgag cataaattca aaatcttctt ctaagttatt gaagaataag
    22981 aacatatcgc aacccgcagc aatagctgca ggtacgtagt cttcacgacg catggctgct
    23041 gtcatcccca acatgtggct ggcatctgtt ataaccaagc cattgaattc cagtttttct
    23101 ttcaataaat cttgaatcaa ttcaggagcc agtgttgcgg gcaaaatgtc ttcatccttc
    23161 aaagttggat tgagtcgttg ttggtaatat ggcaaggcta tatgacccgc cataatcatc
    23221 tcaacaccag cttcaatatg atgacgatag acacgaccaa aactattgtc ccattcttct
    23281 ggagagagct cattgacacc gaggaccagg tgctgatcac gctcttctgt accatctcct
    23341 gggaaatgct tgatacattg aataacatct ctttcagcag tcaatccttc tagataggca
    23401 ctggtataag caataacatc atccgcattt gtgccgtagg ctctggtatt gacaatcgta
    23461 ttgcgccagt tctgaacaat atccacgcaa ggatcaaagt tgacattaac acccaatgca
    23521 gtctcctctc tcgcagatac gagacctgct aggtagggaa tacgaggatc ccgactggct
    23581 tccgattgag cacctgagga aatataggtt ccgcctttca cagccccatc tccacctgag
    23641 tcacagttcg ctgcaaccaa gagaggtact tttgaatagc tttgcaactc gttaatcagt
    23701 ccttgtacct gttctggact gccattcata taacgggctc cacctatgtg atatcggttc
    23761 atcaattcct gattactcag attatttcca ctaaaggcat cccctccgaa gaagaataga
    23821 ttgacaaaca attgaccgat tttttcttca tcagtcagat gagccaaggt attttctacc
    23881 caagcaatct gctcttcatt caaacaatag ggtttcttcc gcaaatcaac caatctaggc
    23941 attgtttcct ccttattttc cgcgccaaat acgtgtatct agcaaaccac aataggcatc
    24001 aacaggcgat actcctgtaa agtctgactc tcctgctagt ttagcaacca aggcttctaa
    24061 tgtaacaggc aagccatcgt aggcattgat ataggttgca acctgtggca tatctgcaag
    24121 tgcaaatggg tgctgaacag agacaacaat ggttggaatt tcgtgaacat agaaaggctg
    24181 gtctggcgtt cccttggcag ctggccaaat aattcgctga gttgttcctc ctgagttgac
    24241 atcaactaaa ttgataatca aatcatagtt atctgtgatt tcggcaattg gacgcttgga
    24301 agcatagaca tttgcaatcg ctgctggtct ttcttcttct ggcaatttgg caatccgtgc
    24361 ctccgtattt tcccaaatag atacttggtg acctcgagct tctaatagtt ctttcagcgt
    24421 atcggctgct ctcttcttgc cagcattgat catagcccca aaaccaccct tataaccatc
    24481 cacttctacc aataaaatcc gtttgtagcg ttctggattg acgggaaaaa ttccttcttg
    24541 tttggctttt accaaggtaa tcgccttgtc agctacttct tttgcaagct gtttcgcctc
    24601 atctctacca atcaaaacca gtgcttcttc ttttggcaac atgatttcct gacgacgacc
    24661 ttcaaacaag tgaagaccga gtttagcttt caagcctaag gtacgacgaa gggcatcatg
    24721 gaggcgttcc tcagaaagca gaccattttc caatccttct ttcatccatt gcaaatcttc
    24781 ttctggatcg ttgaagaaaa ggaacagatc acatcctgcc tcaatagctg taggcaatag
    24841 ctcacgacgg gacatagagg ctgtcatacc gatcatgtga ctggcatccg tgacaatggc
    24901 accattgtaa cctaactctc cacgaagcaa ttcatccaag agggttttat tcagcgaagc
    24961 tggtaacata tcatccaatt cacgttctgg atgcatttct ttctcaacat ttggcaaatg
    25021 aatgtgcccc gccataatac ctggaagacc tgcgtcagcc atctcaccgt aaatccgtcc
    25081 aaatgtttcc atccattcag atttggtcat gggattcgaa gcaaaagaga gatgatggtc
    25141 acgttcatca ataccatcgc ctgggaaatg cttagcaaac ggcacaatgc catgctccat
    25201 aatacctcgc atgtattctt tggataattc aatgacttgg tctacattag ctccccatgt
    25261 tcggtttgca atgattggat tgcgccaatt acggctgagg tccataatcg gtgcaaagga
    25321 ggcattgcag cctaccgcag ctgcttcaag tcctgcaact ttccccattt cataagcata
    25381 gcggggatcg gttgtcgcag caatcttgat ttcatcccca attttcgttc cgtccgtaac
    25441 agcgccattc ccaccagatt cggtattggc tgcaatcaaa agaggaattt tagacttggt
    25501 ctgcaaaata tagttttgct cccaaatatc tgcggcaggt ccaggattgt aacgaacagc
    25561 agcaatctta taatcattta atactccagt cagatattct tctgtccgct ggctccccat
    25621 gttgacaaag aggtgaccga ttttttcatc caaggtcatc tgagcaatgg tttcttcaat
    25681 ccaagaaata gcctcttcat caaggctgta aggtttcttc cgtaaatcta ctaaatgtgt
    25741 catgtttgcc tccaaaaaag ctagagggca tagcgcctct agcccttctc tctagtcgtc
    25801 taaattattc caaaatgcct gtatcaattc tgtttctttc tcatctgtga atgcttgatg
    25861 agcaaattca tctgcaatcg tttctgtcaa atctgcccaa gattgcatct ctcgtcctac
    25921 taaaatagga tagaagtgga cattattgag ttccgccgcc ttcaaatcac caggcgagtc
    25981 accaatcatc ataatcttat caggacaatc cccttcctct attaacagtt tgatgacatc
    26041 ttctttcttg ccacggtctt gacagtacaa ttctgtaaca aagtccagca aaccttggtc
    26101 tgtccactct tcttctactg cttccttatt agcagaagaa accacgtaga cttttcctaa
    26161 ctggctcagt ttttccaagc ccttgtgaac gccgatgaag gctaaaacag gaccgctata
    26221 atgcttaatg gcttgattga cttgagtgga ccattttaag gctaattcca agtcttttga
    26281 tggctgctcc tctatcaatc tttccagaga agcatttgac aaagaatctg tggtcgcgac
    26341 ccaatttttc aagttgtcta taccagtcac acctgcaaat tctaggcctt taaccaagcc
    26401 aacaaaccgg ttaatgccac gttctcgtga gtagagatta actcgattcc attcagctaa
    26461 aaacggttct ttatctttga caccaaaaac atctgcagct aaggggccga agaaaagctt
    26521 atgtttgtag gtcatggtat ccatggcaca gccatcagag tccacacaaa atacgtattc
    26581 cgttttcatc attaaactcc tgaataggct gagaagccac cgtcaatcgg taaaacaaca
    26641 ccgttgacaa aacttgccaa attctcatct gccaagaaga agacccctcc gactagctct
    26701 tccgcttcac caaaccgtcc cattggtgta ttggtcaaaa tcttgttggc acgtgcggtc
    26761 ggttgacccg actcgtcaaa cagcaagcca cggttttggt tggtaaccaa gaatccaggt
    26821 gcaatcgcat tacaacggat accaactttt gaaaaatgga ctgctaacca ttgggtaaaa
    26881 ttactaatag cagccttggc acctgaatag gctggaattt ttgtcaaagg agtaaaggca
    26941 ttcatgctgg aaatattgat aatatttgct cccgagcgac cgatcatatc ctgtgcaaag
    27001 acctgtgttg gcaataaggt tcccaaatag ttcaaattga atacaaagtt gataccggcc
    27061 tcatccaagt cgaagaaagt tttggtatca gctggtagtc caatctcatg gaattcatta
    27121 tccgttgtcg ctttgggatt attgcctcct gcaccattga ttaaaatatc tacaggacca
    27181 aaatctgcta ggacttgcag ccgaacttct tccaaatttt ccttagaaag aacgttagat
    27241 ttgtaagctt ttgcaacgcc tcctgctgct gcaatctcat caacgaagac ctgagccgca
    27301 gcttcattca agtccaaaag cgcaaccttt gcacctgcct tagcgaattc ttttgccaaa
    27361 tagccacaaa gaacgccacc tgctcctgta ataacaacaa ccttgtcctt aaattcaata
    27421 acacgtgtca tactagccct ccttatttcc aactgttttg actgtaattc caaaatctgg
    27481 tgtcttaccc gctgctcgca tattggcttc atagagaccg ttaaagtagg ttgccccaag
    27541 ggctcggtca tacagaccat aaccaggtgt cttggtctga tctccccaaa tgcggcgacc
    27601 gtggtctgga cgcagggcac cagtccagtc ataatctacc aataatttaa caacagcatt
    27661 catatcaatg tcaccagcct gtgacaaatg tgcagtttct tggaagcccc aagcacctgc
    27721 tgtcacattg cgcgtatgca taaaattgat acgattgcgt ttgagagcat attccatcat
    27781 ggcaagaaca tcatttttcg gatcagaagc ataggatcct acacacatgg taattccatt
    27841 gtgctctgaa tcatagagat tcaaaaatcg ttcaacggct tcttgaccag taataatacg
    27901 tggcaatccg aaaattccat acggagggtc atcagggtga atggccattt tgacgccagc
    27961 ctcctcagct gttggcagaa tcgctttgat aaaatactcc aaattcgccc ataaatcttc
    28021 ttcagaaata ttctgacgat aattttcaat aatcgccttc atttcttcct tggaatagga
    28081 cgaatcccaa cctggtaagt tcaaatcatc cgccacagga tcaacacctg ctaaatcaga
    28141 tttaaggaaa gctaaagaag ttgaaccatc tggaagtggg tggtgcaagt ctgaacgtgt
    28201 ccagtcaaac acaggcatga aattgtagca tacaactgga atacctgcag ccccaacatt
    28261 acggatggac gttttatagt tttcgattaa ggcatcacga tttggcttcc cttgtttgat
    28321 gtcttcatga acaggaatgg attcaataac cgtaatttca agtcctgcct cttcgaccat
    28381 ttttttcagc tctagaatgt tttcaagggg ccaagcttga ccaactggca catcatagac
    28441 agctgtcaca attccctgca taccaggaat tgccttaatc tcttcaagtg tcacaggatc
    28501 ctttttccca taccatcgaa atgacatttt catgatttac tctcctttat tgttcaaaaa
    28561 attctttggc attgtaatag gatatggctt ctacaagctg gcctaaacga ttgtaatctt
    28621 caggcacttc ttcatcaaca atccattggc cgacataagt cgctaaaatc cgtctgaaat
    28681 aatcatgccg ttgataagat aaaaagctac gcgaatctgt caacatacca acaaaattag
    28741 caagcatgcc ctgttctgca taggcattca tctggtcaat catgcccaac ttggtatcat
    28801 tgaaccacca accagcacca aattgtagct ggctacgaag cccttcctca ttggactgga
    28861 aattcgccaa agtattggct agagcaatgt tgtaacttgg attgagattg taccaaatca
    28921 tttttggaag ggcattttcc ttaaccaagt tatctaacaa acgattcaaa ttcacagtca
    28981 gacatgtctg gtctccaatc gaatccacac ctacatctgc tccaagtttt tcaaacagtc
    29041 cggtatggtt gttccgtaag gcaccaaagt gaacttgtgt cacaaagcca tgtttcttgt
    29101 acaatcggca caattctcta aagatagcag tctgccattt attgatactg gattggccag
    29161 actctttacc tgcaagtctt gctagtaaaa tatcatcaag ctcttcaagg cttgcttctt
    29221 cgtatgaaat agccgtaaaa ctgatgtcac ttgctcggca accatgttga gcaaaatagg
    29281 aaacgcgctg accaagtgcc tctacaaaac ttgcaaagtc tcttactgct acccctgtta
    29341 cctcctccaa gtgtttcata aatggattga aatttcgatg ttctataaag gcttcatctg
    29401 ggcggaaagt cggtgccact acagtatcta tagttgagtc ctcagccaga cgcttatgcc
    29461 attccaagct atcaagagga tggtcagttg tcccaataaa ggtcacccta gcatccgcaa
    29521 tcagcttacg tggactaact tgatgttctt gcaaataagc attgagctga tgatagagtc
    29581 gctcggcatt ttcttcggtc aacaattcct caacaccgaa aacctgtcgc aattccaagt
    29641 gactccaatg atagagagga tttccgaaag cccgttccaa ggttcttgcc caggctttaa
    29701 acttatctag tttacttgct gaacctgtga tttctgcttc tgagatacca ttagcccgca
    29761 tcaagcgcca cttataatgg tcaccaccca accacagatc tacaatatct tcataaacct
    29821 tatcttcaaa aatttcctta ggatccaagt ggcaatggaa atcatagata gggagctctg
    29881 ctattttccc gtaaagctgc ttagcaggct cattttttag cataaagttt ttgtcattaa
    29941 aactcatttc atccctccaa agctgcaaca aaactgcgag caatcgtcgt tacactttca
    30001 tagccttcag cctgcactcg acttgccaga gccgaaccga ctccaacagc acaagcacct
    30061 gcctttttcc aatctgcaac attttcaacc gaaactccac cagaaggcat caaatccact
    30121 tggggcactg gtccgtgaat atccttgata aatccaggac ccaagacacc accagggaaa
    30181 agcttgataa taggacatcc cgcctgactg gctgtgacaa tctccgttgc agttgcacaa
    30241 cctgggaagt agaatacctc agcctcttgc gccaaatctt gaatttcttt atcaaaatga
    30301 ggactaacca gaaaactagc accagcgtca attgcctctt gtgcgagaga tacattcatt
    30361 acagttcctg ccccgatgac tacggaagaa tcgtctgaga actcctcttg taattctttg
    30421 ataactgtcg ctgcatttgg agtcgaaaat gtaatttcaa tatttcgaat acctcccaaa
    30481 atcgcatggc gagcgatttc tttcgcatct tcttcatctt ttccgcgaat cactgcaaaa
    30541 aagtaatttt cttttaattg ctttaacatc ttgacctcca attagaaagc gttgtcattt
    30601 atagctatag tatacaattc gtcagatgat ttgtcaataa aaaagcaaaa aatacccaga
    30661 aatttattct gggcagtata ttttttattt ctatttatga tcattgagac catgcaaggt
    30721 catatcttta tcgaaccatt cgcttaaaac aacctgtctt actgatataa tatgtgctaa
    30781 catgctatca tatgctgcaa caggatggcg ttgcttgata gccattaaga tattcctgtg
    30841 ggcctgtaaa ctatctgatt tcatctgacg atttgaataa ttttcattga tcagatgaat
    30901 agattgatta atgacgggca tgagacttgt catagccaga ttcccactca tctcagccag
    30961 catacagtgg aatttcacat ccaactccaa atgcttcgtg tctccagcag caacggcctc
    31021 ttcaatagca aggacaattt cttctagtcg agcaatgtct tcgtccgagg caaactgagc
    31081 gacacgctcc gcaattctcg gttcaagcaa ataccgcact tcaaacaaat ctgtcgtcaa
    31141 cttcacacgg tctcttacta aagaaaaacc taggggatcc tctgatactc cttttttaga
    31201 gctgatatag gttcccgacc cttggcgcac ctccaggata tttcgagtag ccaaacttcg
    31261 aacagcttca cgaacagtcg aacgtccaac ttctaaatct tgggccaatt catactcatt
    31321 tggaagctta tcaccaactt catatcctct ttccaaaatc aattccatta agcgctctga
    31381 tgctttttct accaagggtt tcgccatgtg cttggtcctc caatacaact ttctatttgc
    31441 tactattata gctcatttcc tcttataatg gtagtttgga atggcagtcc aacgtttctt
    31501 gatttctctt acaatttgct tgggttgtcg atttcttgag aataaaccct tatgatttcc
    31561 ttgaatacga atgataccaa ctgtagtttc aaaatctgca aaattccata cctgttcacc
    31621 aactaaattc ggaattgaat caaagacgcg atggttcata tcgtagtaat ccacctgaaa
    31681 ttcctctgta taaggaatat cccacatcga atgcaaacct ggaagagtat ctgcaccata
    31741 ttctgtaatc aaaatcggct tgtcaggata aagtttttgc caagtctcca actcttgacg
    31801 gagccctttc tctgccgcct tcaagtcacc atgagcaaca taccaaccat agtaacgatt
    31861 gagacagaca acatcgacca aatccataac ctcatcctta tcaggcgttg ctgtcataat
    31921 attgaccaag gtcacaggac gcttagacgg atctctgtcc ctcatgcgct gaatcagagg
    31981 ttcaaagtaa gcacgtgctc ccttttcatg ccctgccggt tcattggcaa caacccacat
    32041 cactacagaa ggatgattct tatcacgcgc tatcaattca tcaatcacca gctcatgagc
    32101 ctccttggtt tgcataactt cccaagtatt ttttgcttct tcagaatcac ctgtcaaatt
    32161 caaggctgca ttgaaaagct gaaataggcc aactgctggc acttcatcaa ggacgacaat
    32221 tcccaaacga tctgccagcc gcatcatttc ctcagaatag ggataatggg atgtcctaaa
    32281 ggaatttgct ccaatatctt taagcaaatt caaatccata agattggctg cttcattgaa
    32341 accacgacca ttaataaagg tatcttcatg tttaccaaat cccttgaaat agaaaggttt
    32401 tccattgatg aaaaattgcc cattttcaac tgctacacta cgaatgccga attgttctga
    32461 gtaggtatct agcaagtttt ctccgtcaaa tagttcaact tttgcagtat agagataggc
    32521 atccaagacc tcccaaaggc gtggatgttc aatgaccatt tgtccatttt caagaagacc
    32581 tacttcctgt ccctctttat ctaaaataga catacggatg gaatcgtact gcccaactgt
    32641 cttcacatca acattcacta ccgcctgagt caaatcttga tttagctccg tccgaataac
    32701 aatatcctca atcctatttt tgggacgttt atagagatga actgtccgct ggataccagc
    32761 atagt
//
LOCUS       DASFQD010000007        31704 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.007, whole genome shotgun sequence.
ACCESSION   DASFQD010000007 DASFQD010000000
VERSION     DASFQD010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 31704)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31704)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31704
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.007"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(107..1945)
                     /gene="glgB"
                     /locus_tag="U1021_000262"
     CDS             complement(107..1945)
                     /gene="glgB"
                     /locus_tag="U1021_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HEM4710859.1"
                     /translation="MTEFTDLDLYYMNAGEHTTLYEKMGAHIIKERNKIIGTQFRVYA
                     PNAREVFLVGNFNEWQRSHSMEREIDGVFQLYVDGLKSLEDYKYLIITHDGREIYKAD
                     PYAFFSQVRPDTASTTYNSRYKFKDDLWMYNRVNYDFKEQPVSIYEVHLGSWKQKFAN
                     KNEGGAPVEAFNSYKEITPLLIEHIKENNYTHIELLPITEHPLDASWGYQVTGYYSPT
                     SRYGKPDELKYLVDQCHQAGIGVILDWVPLHFCKDAHGLYQFDGSWLYEYSYEQDREN
                     HQWGTANFDLGKGLTRSFLLSNLKYWLEYFHFDGIRVDALSYLLYWRGETDEDKINHA
                     AIDFIKRVNAMVHTDYKGVLMIAEDSSSFPKVTHSLEDGGIGFDMKWDLGWMNDTLKF
                     VERPAIYRKYHSNEITFGMYYNQNEQFLLPLSHDEVVHGKHSIIEKMNGDYEDKFHLA
                     RVYYSFYFAHPGKKLLFMGNEWGHIREWHEYTEMDWGLLQFPIHHSFYQMMKTLSTFY
                     KEHDAFWKYDYQAYEKGFNWVKIDEEASLYAFSRTSDVQEILTIHNFNDQELFDVHLD
                     LPADSEYKLVFSSNAIPMDTFSLYPDENGARITVPRLTSFYLERVK"
     gene            complement(2018..3463)
                     /gene="glgA"
                     /locus_tag="U1021_000263"
     CDS             complement(2018..3463)
                     /gene="glgA"
                     /locus_tag="U1021_000263"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HEM4710860.1"
                     /translation="MTKKSVLFVASEGLPFIKTGGLADVIGSLPKELVKQGLDVRVVL
                     PLYKKIAVNNHSDFDYVSSFDVRAGDIQSMANVYSQVVDGVTFYFIEHRDFFERDELY
                     GYDDDAMRFGYFQHATCRLLEALHFFPDVMHTHDWHTAALPFLCRTFYSYREEFRNIK
                     HVFTIHNLAFQGIFHKQALWSALGMDYSYYLDGIARFHDECISFMKLGILYADKVTTV
                     SETYAHEILTEEFGENMQHVLELRKYDLVGIVNGIDYDSWDSQTDQYLVRNYSLETIE
                     SKKANKLALQAQFALPQDENVLLIGIVSRLTWQKGFYLLTEVLGHLLQAHVQFVILGN
                     GEEDIENAFNHFKHAYPDKFAFYRGYNEPLAHQIYAASDLFLMPSMFEPCGISQLISM
                     HYGTLPLVRETGGLVDTVAPYNMSTKEGTGFSFGGRDAYNMRQVYDLALQTYYDRPDD
                     WYAMVEQAMKRDFSWTASAEKYIWLYREISG"
     gene            complement(3472..4587)
                     /gene="glgD"
                     /locus_tag="U1021_000264"
     CDS             complement(3472..4587)
                     /gene="glgD"
                     /locus_tag="U1021_000264"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase subunit
                     GlgD"
                     /protein_id="HEM4710861.1"
                     /translation="MLRNTLGIVNIEGNNVHFGDVMKHRGVQAFGFLGRYRLIDFALS
                     NMSNSGITEFQVYMPVEMRSTIQHVGTGKHYNINSKRGTLRLLNSATDPNSVYRHDIN
                     AFTENIHYIENSTKDYVLVAPSYFIYSQDFSKVMDDHIATDADITVLYKNVSDAKENF
                     IGCQTLKFGEDRRVVAFEENHGKYKNRPVSLEAYIMKRTTFIDLIKRANKVSSLYWLK
                     DILRDTVDQYKIMGYAHRDYVACINTTASYFNTQIELIDQDTRKLLFKHDWPIHTQTS
                     DSSPCLYGPLAEVKRSLISNGANINGQVENSVIDRDVIIEEGVVIKNSIILNGVTIKS
                     GANIENAIIDKATKIIHPIDIKGSETSPSYLKPHQII"
     gene            complement(4600..5727)
                     /locus_tag="U1021_000265"
     CDS             complement(4600..5727)
                     /locus_tag="U1021_000265"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HEM4710862.1"
                     /translation="MAQNKMLAMILAGGRGTRLEGLTKKVAKPAVAFGGKYRIIDFPL
                     SNCANSGIDIVGVLTQYEPVLLNSYVAQSQRWGLDVQGSGVFVLPPSEKIEGFGLYKG
                     TADAITQNIDFIDLHDPEYVLILSGDHIYKMNYDKLLDTHIQKKADATIAVIEVPIKE
                     ASRFGIMNTDEDYRIEEFEEKPENPKSNLASMGIYIFTWKTLKKYLQEDDKLDTSSHD
                     FGHDIIPKYLEDGRTLIAHPFRGYWKDVGTVNSLWESNMDLIDHAGDLDLSDRSWRIY
                     SEDKGSPAQVIGATATVKSAYIDKGAIIDGTVEHSVISTDVQVNQNAVVKNSVILPGA
                     IIGEGVELDYVIVAENIKIADGVKLTGDIDHILLIDKNVTK"
     gene            complement(5891..6802)
                     /locus_tag="U1021_000266"
     CDS             complement(5891..6802)
                     /locus_tag="U1021_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM4710863.1"
                     /translation="MRIQQLYYIIKIAETGSMNEAAKQLFITQPSLSNAVRDLEKEMK
                     IKIFFRNSKGITLTKDGMEFLSYARQIVEQTELLEDRYKNPNAKRQLFSVSSQHYAFV
                     VNAFVSLLKETEMEDYELFLRETRTWEIIDDVKNFRSEIGVLFLNHFNRDVLLKLLDD
                     NRLSYTTLFTAKPHVFVSKTNPLAQRKSITLDDLVDFPYLSYEQGIHNSFYFAEEILA
                     QEHHKKSIVVSDRATLFNLLIGLDGYTIATGILNSNLNGDNIVSIPLEFDDEIELVYI
                     QHEKALLSDMGEKFINYLLEEVKFDQK"
     gene            6899..7789
                     /locus_tag="U1021_000267"
     CDS             6899..7789
                     /locus_tag="U1021_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014635980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HEM4710864.1"
                     /translation="MINRANTAFFSCNLASQQGFFSISTFLFSVSLLYRIGEKMILKE
                     QMLLVDQVQLAPRIFAMTLQGNMVQDMKMGQFIHIRVPDDSMLLRRPISISEIDRNKS
                     QCRIIYRVEGQGTEVFSKMTVGQYLDVMGPLGKGFEVDFLKEGNRILIIGGGIGVPPL
                     VEVAKQAEFRGVNVTSVIGFATKEAVILEEELASYGMVYVTTDDGSYGRKGNVATVVE
                     ELTNEFAAIYSCGAPAMMNYVDQRFQEHPHAYISLEARMACGMGACYACVVKPKEGQE
                     HENKRVCKEGPVFATGSLIL"
     gene            7799..8740
                     /locus_tag="U1021_000268"
     CDS             7799..8740
                     /locus_tag="U1021_000268"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HEM4710865.1"
                     /translation="MTKRLAISLPGLDLKNPIIPASGCFGFGQEYADYYDLNQLGSIM
                     IKATTRHPRYGNATPRVAETPAGMLNAIGLQNPGVDVVLSEKLPWLEQHFPDLPIIAN
                     VAGFSNEEYAYVSGKISKAPNVKAIELNISCPNVDHGNNGLLIGQVPELAYQAVKAAV
                     EASSVPVYVKLTPSVADITLLAKAAEDAGATGLTMINTLVGMRFNLKTRQPILANGTG
                     GMSGPAVFPVALKLIRQVAQVTDLPIIGMGGVDTADKAIEMMVAGASAVGVGTANFTD
                     PFACPKIIQDLPKRMEVYGIDSLEGLRREIRHSLGKR"
     gene            8905..9600
                     /gene="pyrF"
                     /locus_tag="U1021_000269"
     CDS             8905..9600
                     /gene="pyrF"
                     /locus_tag="U1021_000269"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEM4710866.1"
                     /translation="MKETRPIIALDFAGKEEVQSFLEQFPPDEKLYVKVGMELYYAEG
                     PGIINYLKGCDHSIFLDLKLHDIPNTVESAMKVLAKLGVDMTNVHAAGGVEMMRAARR
                     GLGKDAVLIAVTQLTSTSEEQMRTDQNIQTSLQEAVVHYAQRAQEAGLDGVVCSAHEV
                     ALIKDATSSDFVCLTPGIRPTGGEVGDQKRVMTPADAARIGSDYIVVGRPITKSEHPY
                     QTYLSIKEEWNRG"
     gene            9593..9919
                     /locus_tag="U1021_000270"
     CDS             9593..9919
                     /locus_tag="U1021_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEM4710867.1"
                     /translation="MDKVYQVIIDRPIGYIDKFGNQYPINYGYVPNLLAGDGEEQDVY
                     IISKAIRQSLTAFEGKLVAIIHRRDDVEDKWVLTGLDEKLTVTEIKEKTNFIEQYFDS
                     WIEMVD"
     gene            10056..10688
                     /locus_tag="U1021_000271"
     CDS             10056..10688
                     /locus_tag="U1021_000271"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEM4710868.1"
                     /translation="MTLATEIASHLLDIKAVHLRPEKPFTWASGIKSPIYTDNRITLS
                     YPETRNLIEDGFVQRIEEEFPEVEVIAGTATAGIPHGAIIADRMNLPFAYIRSKPKDH
                     GAGNQLEGRIVKGQKMVVVEDLISTGGSVLDAVAAAEREGADVIGVVAIFTYELPKAD
                     RNFDNAGVKLVTLSNYSELIKVAKVQGYINADGLNLLKKFRQNQETWQED"
     gene            10797..11723
                     /locus_tag="U1021_000272"
     CDS             10797..11723
                     /locus_tag="U1021_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM4710869.1"
                     /translation="MISAIVPCFNEEEAIPYFYDAMEKVRKEMGEQFEYIFVNDGSKD
                     GTLTVLRQLSGQDRAVRYLSFSRNFGKEAALYAGLQAAQGELVTVMDVDLQDPPEMLM
                     EMKAMLDGNPDLDCVGTRRVSRDGEPPIRSFFAKLFYKLMNKISQVEVVDGARDFRLM
                     RRHMVDAILSVSEYNRFSKGIFAWVGFETEYLPYENVERVAGETSWSFWKLLSYSIEG
                     IINFSDTPLNIASYTGFFTFLLSLVLMVFVVFKTLVFGDPTIGWPSTICIILFLGGLQ
                     LMTIGILGKYLAKVFLETKKRPIYIVKEKSSN"
     gene            11733..12386
                     /locus_tag="U1021_000273"
     CDS             11733..12386
                     /locus_tag="U1021_000273"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001841111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEM4710870.1"
                     /translation="MEHSAWHELIKAQLPEHYFGKINQFLDYVYAGGTVYPPREKVFA
                     AIQTTDLEEVKVVILGQDPYHGPGQAQGLSFSVPNSVPAPPSLQNILKELTDDIGVKQ
                     DHDLTAWAEQGVLLLNACLTVPAGQANGHAGQIWEPFTDAVIKVVNSLDQPVVYILWG
                     AYARKKKALITNPKHLVIESAHPSPLSAYRGFFGSKPFSQANAYLTSQGRTGIDWLR"
     gene            12426..13697
                     /locus_tag="U1021_000274"
     CDS             12426..13697
                     /locus_tag="U1021_000274"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEM4710871.1"
                     /translation="MLLVKNGRVLDPQSGLDKVCDILMDGSKIVKIAESISEDVEQEV
                     IDATGLVVAPGLVDVHVHFREPGQTHKEDIHTGALSAAAGGFTSVVMMANTNPTISNV
                     ETLKEVLDSAKKEAIHIYSVATITDHFDGQNLTDFPALLEAGAVAFSDDGIPLTNAGV
                     VRKAMKLAKEQGCLISLHEEDPDLNGVLGLNEQVAEKHFHVCGATGVAEYSMVARDVM
                     IAYETGARVHIQHLSKAESVKVVEFVQGLGANVTAEVAPQHFSRTEDLLLIKGANAKM
                     NPPLRLESDRLAVIDGLKSGVISVIATDHAPHHADEKNVEDLTQAPSGMTGLETSLSL
                     GLTHLVEDGHLTLLQLLEKMTINPAKLYGLDAGYLAENGPADLVIFDPNANRLVTADF
                     ASKSANSPFVGDSLKGQVLYTIANGQIVFGK"
     gene            13828..15942
                     /locus_tag="U1021_000275"
     CDS             13828..15942
                     /locus_tag="U1021_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HEM4710872.1"
                     /translation="MKKKNILLPVMSTLLLAPFVLAQQVQAAETTTAATTTNQPATTD
                     ATATVPATSVENVATEETVVPAAEETIEAVIIHTNDVHGRILEEKNVIGDAKAAAVIE
                     EERAKVENTIVVDAGDAFQGLPISNSTKGEDRANIMNQVGYDAMAVGNHEFDFGMDQA
                     IKYKETLNFPLLSANTYVNGARVFEASTIVDKTPTVVGDEFVVIGVTTPETATKTHPK
                     NVEGVTFTDPVTEVNKVIDEVEARALADNRVYKNYIILAHLGVDSTTPVEWRGSTLAE
                     ALSKNSKLAGKRVIVIDGHSHTVEATTYGDNVTYNQTGSYLNNIGKVTLKSDKLLGEA
                     SLISAADTKNVTPNAKIAALVDEIKAKYEAENAQVVIENNPVELNGDRSNVRVRETNL
                     GNAVTDAIYAYGQTGFSNKTSLAVTNGGGLRATIAKDQPVTKGDIIAVLPFGNIVSQI
                     TVTGQQIYDMFTKSLSSTLQVNPETGEMLLDENGMPLFEASGGFLHISGANVFYDPTL
                     PVEERVLLIGILNPETGEYDALDLEKTYYLATNDFLAAGGDGYTMLGGAREEGPSMDS
                     VFAEYLKTADLSAYEVVNPYSRIIPVNSSIDTDEDGYPDFIEILLDTDPENPASNPET
                     VPAENTDSPSNQVQNTSATDKKAPVDSPKVGDKKTEVASPAKTTKAGVLPNTGDQMNL
                     TLSLFGLGLAGLAVAVGRRKEN"
     gene            15994..16641
                     /locus_tag="U1021_000276"
     CDS             15994..16641
                     /locus_tag="U1021_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HEM4710873.1"
                     /translation="MQTVFQYQKERDREQISSYVLLSNSPRRKQLLGFLQPQIASVEV
                     DERGIEEHFMKQFATDDFLTRAAKTCCEISKAKSDMDLVTGHLYISADTIVVSDGQIF
                     NKPQDLTEAETMLRSYFGKSHHVVTSVCLRTRHSLDVFYTVAQIDFVDYYSALEEVIQ
                     SYIREKQPLDKAGAYGIQELDPRFVSGISGDIHTIIGLPVAEVSRRIFSEEGFEK"
     gene            16693..17181
                     /locus_tag="U1021_000277"
     CDS             16693..17181
                     /locus_tag="U1021_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HEM4710874.1"
                     /translation="MTVDIERYKQLAQQKQGEHRKFLANLKKKAPKNLDRIVQDIHAE
                     VFSEIDCTECANCCKTLGPLFTEADITRIAKHLRMKLPVFEDMYLHVDEDGDKVFQSM
                     PCPFLGGDNLCSIYDARPKACREFPHTDRKKIYQINNLTIKNTLICPAAYLFVEKLRE
                     RI"
     gene            17631..18590
                     /locus_tag="U1021_000278"
     CDS             17631..18590
                     /locus_tag="U1021_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HEM4710875.1"
                     /translation="MNALLFDERPIVANPVLAREIGLNEAIVLQQINFWLEVNKQNGK
                     NYHDGRYWTYNSIRAWHESDFSYLSYETVKRTFSKLEKAGFLLTANYNKDPRDKTKWY
                     SLDLERIFELQEMVKIKRNQIAEKVLDEGINSTLTNALGQNDPMEKFNLTQCTRSKSS
                     TALGQNDPIHGVNLNQPLPNKTTNNTTEDTSFYINQSIEEGDELEKLKKQVQYELLVQ
                     SGCREKLCEWDEVLPVIADVFYQHDGTISINQMRLPIDFVKERFRQLTMYHIDYICEC
                     LSKVDTNIRNIRAYILTTAFNAPQTIGAYYSNQVKQDFGGNNL"
     gene            18587..21139
                     /locus_tag="U1021_000279"
     CDS             18587..21139
                     /locus_tag="U1021_000279"
                     /inference="COORDINATES: protein motif:HMM:NF019142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G5 domain-containing protein"
                     /protein_id="HEM4710876.1"
                     /translation="MISKKCKFCLRKLTIGLVSLSIGLICLNSTQLSSVNSFTVYANE
                     VISHRNDVDGSSKDWGTLNGNQFVVDYTDTSLEISKGAHSSLTENYQAIRIPEAYPYK
                     LLVNGQPKTLSDFRRDKLGKLIAEIDGREVPLLDYGMVEYQLNRYLGQDIYNIYGNLS
                     YTAYAFLTSRNSHHGYFELTEADNVRDTNGQLVTGFFQTPQYYEMASAYQKSNAGYLK
                     VQVGDKELSTNIIDGRLKGLKSATKKYFLVLNSEFSIEPQTGKSIKHLKELTEEEVQQ
                     LNLTDQKVNSNIEFIIDGKTYKTSGRINSWKNSTINPLKTRLAIMSIGDGSNLHGFDL
                     FASNHNYIEVVEKVDNTPVIPESISKKIEYVTEDGEKVGDGHTITGNKGDEVTLEVTP
                     PNGYVFSTTPPTSITLKDNSSYQIIVNEVVGQETVERKEEINYQVIRQENSEMYEDEE
                     VIVSKGSKGIRIIQETFETRKGTRTQKLLDTKTIINKEAVDEIIQYGTKQIEDEQVIT
                     RTEIVPFDVIEESDPNMYEGEVVIVTEGQNGEVTIHDHYKTFKGVRDPEPFNSESTET
                     KIKVNKVVRIGTKKIEGETTEKNSVITPFGVLVEEDDSLFEDERIIVRNGVPGLVDLV
                     TTYKTNKGEKVGDPINISENVVRAPVDEVVKVGTKPIESITSSEKLLDIPFEVEKKID
                     DTLEEGIEKTIQEGKNGQKRVIVVTNYLRGVQNGDVQIEEEVILEPVKEIILVGTKKV
                     QKQNQTPNKNETDDNSKSPILPQVTEGENGKPKNQESNRSVSDYPEKSKEKISQTQAN
                     GNDNSGKKIVAEKLPETGDTVVNPFLVIVSSLLCLVTSIGMIMWKDKKSDDK"
     gene            21129..21623
                     /locus_tag="U1021_000280"
     CDS             21129..21623
                     /locus_tag="U1021_000280"
                     /inference="COORDINATES: protein motif:HMM:NF024099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PcfB family protein"
                     /protein_id="HEM4710877.1"
                     /translation="MINEDVGNRLVTLNLRLAKVSAKLIVAALKVLAKEAESKKLSVK
                     QYLSHKSEQGEVPLKDLVGKGSLENIPMKHPELLELKKELNKHGVRFSILKNKENKNF
                     EVFFQAKDTAILEHSFKQAVQKAERKTRIKQSTLKKIKQYQKSLGEQIIKPKIKQKHQ
                     EQSL"
     gene            21635..23422
                     /locus_tag="U1021_000281"
     CDS             21635..23422
                     /locus_tag="U1021_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018579571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HEM4710878.1"
                     /translation="MEVIEQIKLDILNSIPIGDRRTLIKSFIPYLLFFYLGTCLGHHI
                     RSFKGGDVLDRLFQAILEIESMSWLFIPSFDDLLIGIGLSISVWGVMYSKKRHAKKFR
                     HGVEYGSARWGDGKDIQPYEDPIFENNILLTNSEKLTMNSRPSNPKFARNKNILVVGG
                     SGSGKTRFFVKPNLMQMHSSYCVTDPKGTIVLECGKMLESNGYQIKILNTINFKKSMK
                     YNPFAYLKSEKDILKLVQTIIANTKGEGEKAGEDFWVKAEKLYYTALIGYIYYESPKE
                     EQNFNTLLAMLDASEVREDDENFKNAIDYLFLALERKKPHHFAVKQYKKYKLAAGKTA
                     KSILISCGARLAPFDIEELRELMSDDELELDTLGDRKTALFVIISDTDDTFNFVVSIM
                     YSQLFNLLCDKADDVYGGRLPVHVRCLLDEFANIGLIPRFEKLIATIRSHEISAAIIL
                     QAKSQLKAIYKDNADTIIGNCDTELFLGGKEGTTLKELAENLGKETIDLYNTSETRSN
                     QKSFGLNYQKLGKELMSRDELKVMDGGKCILEIRGTRPFYSDKYDITKHKHYKLLEDF
                     DKRNKFDIEKYLKKRGGVKLTENTKVIQL"
     gene            23495..23803
                     /locus_tag="U1021_000282"
     CDS             23495..23803
                     /locus_tag="U1021_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006270424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEM4710879.1"
                     /translation="MEHEMININAHLVKDVVFSSFESEDGIVPVVNFSLVKKYGKGKE
                     YTNCSAYGDKVEIAKEFEKGDLIHVFGYFKENRKGDKVYKNFIVKSMNKIEQDEMEEE
                     "
     gene            23803..24018
                     /locus_tag="U1021_000283"
     CDS             23803..24018
                     /locus_tag="U1021_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Maff2 family protein"
                     /protein_id="HEM4710880.1"
                     /translation="MDFFTQGVDVLKTLVIAIGGGLGAWGVINLMEGYGNDNPGAKSQ
                     GIKQLMAGGGIVLIGLKLIPLLANLIQ"
     gene            24027..24890
                     /locus_tag="U1021_000284"
     CDS             24027..24890
                     /locus_tag="U1021_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000466911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710881.1"
                     /translation="MFDIFGKLEEMIQEILLDMIKGTLTSMFTDLNHQLDFVSGQVGQ
                     SPNQFNAEVFSFIKHINDSVVLPIAGLVITAVLCLELIQVVMQKNNMAEVDTFEFFKY
                     VIKMWVAVYLVSHAFEFAMAAFDMGQHMIGQATGVIHGETSISSEQITAMVDSLKDKN
                     IGELAGIVFELQAVKLTIQIISLIILIITYGRMFEIYAYSSVAALPFATLGNREWGQL
                     GHNYIRGLFALALQGLFLVICFGIYAVLLRGVKMTDIHMSVFSILGYTVLLGFMMLKT
                     GTLARSIMNAH"
     gene            24903..25271
                     /locus_tag="U1021_000285"
     CDS             24903..25271
                     /locus_tag="U1021_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrgI family protein"
                     /protein_id="HEM4710882.1"
                     /translation="MAYVQIPKDLSKVKTKIAFNLTKRQLIGFSLAGFVSLPVYLSIR
                     ESVGNDLAMLVFIILAFPFLFLTFYEKDGLTSEIYLKYIFLQQHYQPCVRYKRALYKA
                     KFKEEVHETRKKKKTGTRIS"
     gene            25228..27657
                     /locus_tag="U1021_000286"
                     /pseudo
     CDS             25228..27657
                     /locus_tag="U1021_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637000.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            27665..28225
                     /locus_tag="U1021_000287"
     CDS             27665..28225
                     /locus_tag="U1021_000287"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710883.1"
                     /translation="MGKSKRMVRETNKKRYSKSKPDIGQRKEVQDFSGRAVDEKVRFQ
                     HQIIHKGSKLECNHLKGDTSEKKNHIHKKSNDKSLQTHSNNQDANKSTIQLDSLRTKM
                     VNQESSQQSHLPERLQVESRPPTQRRQVQLNQRNSFENQKFSQTQNDYATTVQTSLHS
                     EIKTSFEEDIQPPPLEMDGRPPVLNL"
     gene            28522..30879
                     /locus_tag="U1021_000288"
     CDS             28522..30879
                     /locus_tag="U1021_000288"
                     /inference="COORDINATES: protein motif:HMM:NF017102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HEM4710884.1"
                     /translation="MLVKERGNIFSDRPLSPFETGLELSQNEADSTGFVETASIIEGD
                     RNVKVNDDSILSSRIIPGNRNSQIIISDESKNPNIRRMFVKNSQHLQNDKMVTLIDEA
                     CQSSEQFQPNLNDNTITVGQTDLSINAWSKKLHQSKFSLFSSNILQSNAVIEKVKIGE
                     NQFSTRTRKQSSSRQVKKEAKVIVDKGSILDSTNNKDSQIDSLVSKPTSNTSLLPVDR
                     RPTYALTKTTMNQTYKGRLPSKNNIKVKPNKPLRFPNGQAQVHEKINSLVNEPIEFVK
                     DRKNNRLLKNIEKSKLGRIQKTPYKKVMSVMANSEFLAASYLQAGAEENVAVDATTKA
                     MNIHATTTMKIAQKSNRKKTLKKLTKKAKIRQSQLEFRHKYRLLKEDKTFKRQSFYRK
                     AMYRHRMRQQIRKKHLPRFRDRIKEEAIKILNQFVQYITTKWKSMLVLVLAVFSLLTV
                     VYSNSQFMFGALSSVSYQLTTTSYLSSEEMLIALNHIFSTYELTLSNQLTRLKESKPG
                     YEEYIVKGREQIGHDPHVLLAYLTARFGEIKDQASVEPAMRQLFEQMYQVTYREEKEI
                     RYRTVKEEVLDTSGKKTIVEKRVPYLYRKLIATVSKKDMDGLVHEIFASKPQNLEHYK
                     ILRESKGNLEASFPSGTGISLPGNVSSVYDVNLTGGNFPPPNPSHVAALNGGYPGQCT
                     WYVYNRFSQLGRPIQHSPMGNGGEWAFYAAKYGYPVSREAAVCMPPTVPYADPTYGHI
                     AFVERVNPDGSIVISEMNVKGEFVISTGYLPREMAAQCYYINFGL"
     gene            30890..31105
                     /locus_tag="U1021_000289"
     CDS             30890..31105
                     /locus_tag="U1021_000289"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710885.1"
                     /translation="MRKDIQMLQKKKEKLLEKKQKLDQDLAQVLQDEQDLIYEEVIVV
                     FEKSNLSLEEFTKKVLFEKELSHETII"
     gene            31089..31685
                     /locus_tag="U1021_000290"
     CDS             31089..31685
                     /locus_tag="U1021_000290"
                     /inference="COORDINATES: protein motif:HMM:NF025641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4366 domain-containing protein"
                     /protein_id="HEM4710886.1"
                     /translation="MKRLFSFVRFAGLVMLFSGCQTIYASSPNTDTNSQPVAISVNPQ
                     ASEQSNAKGQVTENVDANNQDYEITESVATKRQFVTFTSKSGKVFHLIIDHDKGGQNV
                     QLLTEVSEQDLLNLIESTNTVAVKPQKTEEVVEEKPAKKEEPKQNSSVGSYIIIGLFL
                     IGVLCAGYYMKVIKPKKEHNFDEFEEDDDYVSEGEEEV"
BASE COUNT        10210 a         5475 c         6725 g         9294 t
ORIGIN      
        1 tttcccactc ccttttgcat gcaaaaaaga atggagtaag tgagctacac ccaaaaagtt
       61 agacagaaaa tttgggtcgg ttcaatactc cattttttac agataattat ttcacacgct
      121 ctagataaaa actggtcaaa cgtggtacag taattctggc tccattttca tcgggataga
      181 ggctaaatgt gtccattgga atagcattag atgagaagac aagtttatat tcgctgtcag
      241 ctggcaaatc taagtgtaca tcaaatagtt cttgatcatt aaagttatga atagtcaaga
      301 tttcttgcac atcactagta cgagaaaaag catacagact tgcttcttca tctattttta
      361 cccaattaaa tcctttttca taggcttggt agtcatattt ccagaaagca tcatgttctt
      421 tatagaaagt agataatgtt ttcatcattt gatagaaaga atggtggatt ggaaattgta
      481 gcagtcccca gtccatttct gtatattcgt gccattcacg gatgtgaccc cattcatttc
      541 ccatgaagag taatttcttt ccaggatggg caaagtaaaa gctgtagtag actcgagcca
      601 gatggaactt atcttcgtag tcgccattca tcttctcgat aatggagtgc ttcccatgaa
      661 caacttcgtc gtgcgaaagt ggtagtaaga attgctcgtt ttggttatag tacataccaa
      721 aagtgatttc atttgagtga tattttcgat aaatagcagg gcgttccacg aattttagtg
      781 tatcattcat ccagcccaga tcccatttca tatcaaatcc aataccgcca tcttctagag
      841 aatgtgtgac tttagggaag cttgaagagt cttcagcaat catcaagact cccttatagt
      901 cggtatggac catggcattg acacgtttga taaagtcaat tgcggcatga tttatcttat
      961 cctcatctgt ttcaccacgc caatagagga gataagatag tgcatcaaca cggatgccat
     1021 caaaatggaa atattccaac cagtatttta aattagaaag aaggaaagaa cgagtcagtc
     1081 cttttccaag gtcaaaatta gcagtccccc actggtggtt ttcacggtct tgttcgtagg
     1141 agtattcgta tagccaacta ccatcaaact ggtagagccc gtgagcatct ttacagaaat
     1201 gaagtggtac ccagtcaaga atcactccga ttcctgcttg gtgacattgg tcaactaaat
     1261 acttaagttc atctggcttg ccatagcgac tagttggact atagtagcct gttacctgat
     1321 agccccaaga cgcatcgaga ggatgctcgg taattggcaa taattcaata tgtgtgtagt
     1381 tattttcctt gatatgttcg atgagaagtg gagtaatttc cttataacta ttgaaagctt
     1441 ctacaggagc tcctccttca tttttattag caaatttttg cttccacgaa cctaagtgca
     1501 cctcgtagat ggataccggc tgttctttaa aatcatagtt aacacgatta tacatccaga
     1561 ggtcatcttt gaatttataa cgcgaattgt aggttgtaga ggcagtgtct ggacgaactt
     1621 ggctgaaaaa tgcataaggg tcagccttat atatttcacg cccatcgtgt gtgataatca
     1681 ggtatttata atcttcaagg gattttaatc cgtctacata aagttgaaac actccatcaa
     1741 tttcacgctc catagagtga ctgcgttgcc actcgttaaa attgccaact aagaatactt
     1801 ctctggcatt tggggcatag acacgaaatt gggttccgat aattttgttt cgttctttta
     1861 taatatgagc acccattttt tcgtaaagag tggtatgctc accagcattc atataatata
     1921 aatctaggtc agtaaattct gtcatagcaa tctccattgc cgaaaaggag tggactaggg
     1981 tcacactccg attcagttta ttttttcatc ttatttccta accactaatt tcacggtaga
     2041 gccagatgta tttctctgcc gaagctgtcc aactaaaatc acgcttcata gcttgttcaa
     2101 ccatagcata ccagtcatcg ggacggtcat agtaggtttg aagggctaaa tcatagactt
     2161 gtcgcatatt gtaagcgtca cgccctccaa agctaaaacc agttccttcc ttggtagaca
     2221 tattgtatgg tgctacagta tcaaccaagc cacctgtttc acgcactaga gggagtgttc
     2281 cgtagtgcat tgaaatcaac tggctaatgc cgcatggttc aaacatagaa ggcatgagga
     2341 agagatcact tgctgcataa atttggtggg caagtggttc attgtaacca cggtagaatg
     2401 caaatttatc aggataagca tgtttaaagt gattaaaggc attttcaatg tcttcctcac
     2461 cattgcctaa gataacaaat tggacatggg cttgaagaag atggccaagt acctcggtca
     2521 agaggtagaa ccctttttgc catgtcaaac gagagacgat acctatcaat aggacattct
     2581 catcttgtgg aagggcaaat tgtgcttgca gggccagttt attagccttt ttactttcaa
     2641 tcgtttcaag actataattt ctcacaaggt attggtctgt ttgactatcc caactgtcat
     2701 agtcgatacc attgacaata ccaaccaggt catatttgcg caactctagt acatgttgca
     2761 tgttttcgcc gaattcttcc gttaggattt cgtgagcata agtttcagaa actgtagtaa
     2821 ccttgtcagc gtataggata ccaagcttca tgaagctgat acattcatca tgaaaacgtg
     2881 caatgccatc caaatagtag ctatagtcca tgccaagcgc tgaccaaagt gcttgtttgt
     2941 ggaaaatacc ttgaaaagcc aagttatgaa tagtgaatac atgcttgata ttgcggaatt
     3001 cttcgcggta gctatagaaa gtacggcaaa ggaatggaag ggcagcagtg tgccagtcat
     3061 gtgtgtgcat gacatccggg aagaaatgaa gtgcttctaa cagacgacat gtagcatgtt
     3121 ggaaatagcc aaaacgcata gcatcatcgt cgtatccata tagttcatct cgttcaaaga
     3181 aatcgcggtg ctcaataaaa tagaatgtta ctccatcaac aacctgactg taaacatttg
     3241 ccatagattg gatgtcgcca gcccgcacat caaaacttga tacgtaatcg aaatcagagt
     3301 gattgtttac tgcaattttt ttgtagagtg gtagaacgac tcggacatct aaaccctgtt
     3361 tcaccaattc ttttggtaaa gagccaataa catcagccaa tccgccagtc ttgatgaatg
     3421 gaagtccctc ggatgctaca aagagaacag atttttttgt catgttagct cctaaatgat
     3481 ttggtgtggt ttcaagtatg aaggcgaagt ttcgcttccc ttgatgtcaa ttgggtgaat
     3541 aattttagtt gctttatcga taattgcatt ttcaatattc gccccactct tgattgtcac
     3601 gccattgaga atgattgagt ttttgataac aacaccttct tcaatgataa catcgcggtc
     3661 aatgactgaa ttttcgactt gaccattgat attcgctcca tttgaaatta ggctacgttt
     3721 gacctctgcc aatggaccat ataaacatgg tgagctatca cttgtctggg tatggattgg
     3781 ccaatcatgt ttgaagagga gtttgcgggt atcttggtca atcaattcaa tttgagtatt
     3841 gaagtaggaa gcggtcgtat tgatacatgc gacataatca cgatgtgcat agcccataat
     3901 cttgtactgg tcaactgtat cacgcaaaat atcttttaac cagtagagag acgatacttt
     3961 gttagcacgt ttaatcaagt cgataaatgt agtccgtttc ataatgtagg cttccaggga
     4021 aacgggacgg tttttatatt taccgtggtt ttcttcaaaa gctacgacac gacggtcttc
     4081 accaaatttg agagtttggc agccgatgaa attttcttta gcatctgaaa cgtttttata
     4141 aagaacggta atatcagcat ccgttgcaat atggtcatcc atgacttttg aaaaatcctg
     4201 gctatagatg aagtaagatg gagcaactag cacataatct tttgtagaat tttcgatgta
     4261 gtggatgttt tctgtgaagg cattaatatc gtgacgatag acactatttg ggtctgttgc
     4321 gctattgagc aagcgaaggg taccgcgttt actgttgata ttatagtgtt ttcctgtacc
     4381 aacgtgctga attgttgaac gcatttcgac aggcatgtat acttggaatt ctgtaattcc
     4441 agagtttgac atattggata gagcaaagtc aattaggcga taacgaccta agaaaccgaa
     4501 agcttgtacg ccacggtgct tcatcacgtc accaaaatgt acgttgtttc cttcaatatt
     4561 tacaattccg agagtatttc ttagcatagc agtcctttct tacttggtta cattcttgtc
     4621 gatcaagagg atatggtcga tgtctcctgt gagtttaact ccgtcagcaa ttttaatatt
     4681 ttcagcgacg atgacgtagt caagctcaac accttcgccg ataatagcac caggtaggat
     4741 gacagaattt tttactacgg cattttggtt gacttgcaca tctgttgaaa taacagaatg
     4801 ttctacagta ccatcgatga ttgccccttt atcaatatag gcagatttaa cagttgcagt
     4861 cgcaccaatg acttgggcag gagatccctt atcctctgaa tagattctcc atgagcggtc
     4921 agaaaggtcc aaatctccag cgtgatcaat caagtccata ttggattccc agaggctgtt
     4981 aacggtacct acgtctttcc aataaccacg gaatggatgg gcaatgagag tgcggccatc
     5041 ttctaagtat ttcggaatga tgtcgtgccc aaaatcgtga gatgaagtgt ccaatttgtc
     5101 atcttcttga aggtactttt tcaaggtctt ccaagtgaag atatagatac ccattgatgc
     5161 taaattgctc ttaggatttt ctggtttttc ttcaaattct tcaatacggt aatcttcgtc
     5221 cgtattcatg ataccaaaac gtgaagcttc tttgatcgga acttcgataa ccgcaatcgt
     5281 ggcatctgct tttttctgaa tatgtgtatc aaggagtttg tcgtagttca tcttatagat
     5341 gtggtcacca gacaaaatca atacgtactc tggatcgtga agatcaatga aatcaatgtt
     5401 ctgtgtaata gcgtcggctg tacctttgta aagtccgaaa ccttcgattt tttcactcgg
     5461 tggtaataca aagacgccag atccttgtac atcaagcccc caacgttgag actgtgcaac
     5521 gtatgagttc aagagaacag gctcatactg agtcaaaact ccgacaatat caatacctga
     5581 gttggcacag ttactgagag gaaagtcaat aatgcggtac tttccgccaa atgcgaccgc
     5641 tggtttggcg actttttttg tcaacccttc tagacgtgtt ccacgtccac cagcaagaat
     5701 catagctaac attttatttt gagccatcta accactcctt aatatatatg atacatgtat
     5761 tatagcatag agtataaaaa aatgaaagcg tttccttaaa gaaaagtgaa ttattttcat
     5821 ttttcttttc aacgtctttc ataaatgtat cataacatat tgtattttgt ttgtctatat
     5881 aaagtggtat ttatttttgg tcgaatttta cctcttcaag taggtaattg atgaattttt
     5941 ctcccatgtc ggacagcaat gccttttcgt gttgaatata gaccaattcg atttcatcat
     6001 caaattccag aggaattgat acaatattat ctccgttaag gtttgaattg aggatacctg
     6061 ttgcgattgt atagccatct agaccgatta agagattgaa gagtgtggca cggtcagata
     6121 cgacaatcga ttttttatgg tgttcctggg ctagaatttc ttctgcaaag tagaaggagt
     6181 tgtgaatacc ttgctcgtag ctgagatagg ggaaatctac caaatcatcg agagtgattg
     6241 actttctttg tgccaaagga ttggttttgc tgacaaatac atgtggtttg gcagtgaaga
     6301 gagttgtata ggatagtcga ttgtcatcca aaagtttcag caggacatca cggttgaaat
     6361 ggttgaggaa aagcactccg atttctgagc ggaaattctt aacgtcatca atgatttccc
     6421 aggtccgtgt ttcacgtagg aagagttcat aatcttccat ctcagtttct ttcaaaagtg
     6481 agacaaaggc gttgacgaca aaggcatagt gttgagaaga gacgctaaat agttggcgtt
     6541 ttgcattcgg atttttatag cgatcttcta aaagctctgt ctgctcaaca atttgacgag
     6601 cgtaggaaag aaactccatg ccatcctttg tcagggtaat gcccttagaa ttacggaaaa
     6661 agattttaat tttcatttct ttttccaggt ctcgtacagc gttggaaagg ctgggttggg
     6721 taatgaagag ttgtttggca gcctcattca tactgcctgt ttctgcaatt ttgataatat
     6781 agtataattg ttggattctc atacctctat tgtaacatga tttgacaaat tattctaaaa
     6841 aatgtataat gctgaaaata tatcctttaa ctgagtccag agaggcgaag aagggaacgt
     6901 gataaatagg gcaaatactg ccttcttttc gtgtaacctt gctagccagc aaggtttttt
     6961 ctctatatcg actttcttgt tttctgtgtc attgttatat agaataggag aaaagatgat
     7021 tttaaaagaa cagatgttac tggtggacca agtccaacta gcgccacgaa tttttgctat
     7081 gaccttgcag ggtaatatgg tccaagatat gaaaatgggg caatttatcc atattcgtgt
     7141 cccagatgat tccatgctct tgcggagacc gatttctatt tccgagattg atcggaataa
     7201 gtctcaatgt cggattattt accgagtgga aggtcaaggg acggaagtct tttcgaaaat
     7261 gactgttggg cagtatttgg atgtcatggg accgcttggg aaagggtttg aagtagactt
     7321 tctcaaagaa ggtaaccgca ttctcatcat tggaggagga atcggtgttc ctcccttggt
     7381 ggaagtagcc aaacaggctg agttccgtgg tgtcaatgtc acgtcagtca ttggctttgc
     7441 caccaaagag gccgtcattt tggaagagga gctggcaagt tatgggatgg tttatgtcac
     7501 aacggatgat ggttcctatg ggcgtaaggg gaatgttgca acggtcgttg aagagctgac
     7561 aaacgagttt gcagccattt actcatgtgg ggcgccagct atgatgaact atgttgacca
     7621 acgctttcag gaacatcctc atgcctacat ttcactggag gctaggatgg cttgcgggat
     7681 gggggcatgc tatgcctgtg ttgtcaaacc caaagaggga caagaacacg agaacaagcg
     7741 tgtctgcaag gaaggtccag tctttgcgac tggtagtctg attttatagg aggttgatat
     7801 gacaaaacga ttagcgattt ccttaccagg cttggacttg aaaaatccca tcattccagc
     7861 ctctggctgc ttcggttttg gtcaggagta tgcagattat tatgacctta accagcttgg
     7921 atccattatg attaaggcga ctacccgtca tcctcgttat ggcaatgcga ctccccgtgt
     7981 agccgagaca ccagcaggta tgctcaatgc cattggactt caaaatccag gcgttgatgt
     8041 agtcttatcc gaaaaattac catggttaga gcaacatttc ccagacttgc caatcattgc
     8101 caatgtagct ggcttttcca atgaggaata tgcctatgtg tcagggaaaa tttcaaaggc
     8161 tccaaacgta aaagctatcg agctgaacat ttcctgtccc aatgtggacc acggaaataa
     8221 tggtctcttg attggacagg tgccagaatt agcctatcaa gcagtaaaag cagcagttga
     8281 agcctcatct gtacctgttt acgttaagct gacaccaagt gtggcagaca taaccctgtt
     8341 ggccaaggct gctgaggatg ctggagcgac tggcttgacg atgataaata ccttggttgg
     8401 tatgcgattc aatctcaaaa cgcgacaacc aatcttggca aatggtacag gaggaatgtc
     8461 aggtccagca gtttttccgg ttgctctcaa actcattcgt caggttgctc aggtgactga
     8521 tttaccgatt attggtatgg gtggtgtgga tacggcggac aaggctatag agatgatggt
     8581 tgcaggagct tcagctgtag gggtaggaac agccaacttt acagacccat ttgcttgtcc
     8641 aaagattatt caagacttgc caaaacgcat ggaagtttat ggtattgata gtttggaagg
     8701 tttacgccga gaaattagac atagcttggg taagcgttga caaaggtaaa ataaaagagt
     8761 aatataaaga aaatatctcc tttaactaag tccagagagg ctaggaaggt gtcatgtaat
     8821 atgcttgaaa ggtgattttc aagctgaatt cgtgcacatc cctgaccgat ttggcaggga
     8881 tttttgtgta aatgaaagga ttttatgaaa gaaacaagac caattattgc ccttgacttt
     8941 gcaggtaaag aagaagtcca gtcttttttg gaacagttcc caccagatga gaaactctat
     9001 gtaaaggttg gaatggagtt gtattatgcg gagggaccag gtattatcaa ttatttgaaa
     9061 ggctgcgatc acagtatttt tctagatttg aaactgcatg atattcctaa taccgtcgag
     9121 tctgctatga aagtcttggc aaaactcggt gtggatatga ccaacgttca cgctgctggt
     9181 ggtgttgaga tgatgcgggc agcacgaagg ggattgggta aggatgctgt tttaatagcg
     9241 gtcactcagt tgacctctac ctcagaggag cagatgagaa cggaccagaa tatacagact
     9301 agtttgcagg aagcagttgt tcactatgct caaagagcac aagaagctgg tcttgatggg
     9361 gtggtttgtt cagctcatga ggtggctttg attaaagatg ctacgagttc tgattttgtg
     9421 tgcctgacgc cagggattcg tccgactggc ggtgaagtag gcgatcagaa acgagttatg
     9481 acaccagcag atgctgctcg aatcggtagt gattacattg tggtaggtcg cccgattaca
     9541 aaatcagaac atccttacca gacctatttg tctattaaag aggagtggaa tcgtggataa
     9601 ggtttatcag gttataatcg atagacctat cgggtatatt gataaatttg gcaaccagta
     9661 tcccattaat tacggctatg ttccaaatct attggctgga gatggtgaag agcaagatgt
     9721 ttacatcatt tccaaagcta ttcggcagtc cttgacagct ttcgagggga aattggtcgc
     9781 gattatacat cgcagagatg atgtcgagga taagtgggtt ctgacaggtc ttgatgaaaa
     9841 acttaccgtg acagaaataa aagagaaaac caatttcatt gaacagtatt ttgattcatg
     9901 gattgaaatg gtggactaag agaagtctgt aagaattcaa cctggataaa tatagttttt
     9961 atagggttca tagattgaac caatgcttta ggagtgacag gctattcggc gggatggtca
    10021 tgttggaatg gtacgcattt agaaggaggt ctattatgac actagcaaca gaaatcgcat
    10081 cacacttatt ggatattaag gcagttcatc tgcgtccaga aaagccattt acatgggcat
    10141 caggtatcaa atcccctatc tatacagata atcgtattac actatcttat cctgaaactc
    10201 gaaatttgat tgaagatggc tttgtccaac gcattgaaga agaatttcct gaggttgagg
    10261 tgattgccgg aactgccaca gcaggtattc ctcatggtgc tatcattgca gatcggatga
    10321 atttgccatt tgcatatata cgtagcaaac caaaagatca tggtgcaggg aatcaattag
    10381 agggtcgcat cgtcaaggga caaaaaatgg tagtcgttga agacctgatt tctactggag
    10441 ggtcagtact tgatgccgta gcagctgctg agcgtgaagg cgctgacgtt attggtgttg
    10501 tggcaatctt tacctatgaa ttgccaaagg cagatcgtaa ttttgataat gctggcgtga
    10561 aattggtgac acttagcaat tattcagagt taatcaaggt cgcaaaagta cagggatata
    10621 tcaatgcaga tggtttgaat ctgcttaaaa agttccgtca aaatcaagaa acttggcaag
    10681 aagactagat ttaaaacgag cccacgcacg atttctggga acttatcctg taaaatggta
    10741 taatagtctc taacgtattt tgagaataca ataattgacc gtatgaggag aagaatatga
    10801 tttcagctat cgtgccttgt tttaatgaag aagaggcaat tccctatttt tacgatgcta
    10861 tggagaaagt tcgtaaggag atgggggaac aatttgagta tatttttgtc aatgatggtt
    10921 caaaggatgg gacattaacg gttttacgcc aattgtctgg tcaagaccga gctgttcgct
    10981 atctttcctt ttcaaggaat ttcgggaaag aagctgctct ctatgcaggt ctacaagctg
    11041 cgcaaggtga gctagtgaca gtcatggatg ttgatttaca agatccacct gaaatgttga
    11101 tggaaatgaa ggctatgttg gatggaaatc cagatttaga ttgcgttgga acccgtcgtg
    11161 tcagtcgtga tggtgaacca ccgattcgta gcttttttgc aaaattattc tacaaattga
    11221 tgaataaaat cagccaggtc gaggtagtag acggtgcccg tgatttccgt ctcatgcgtc
    11281 gtcacatggt agatgccatt ctatctgtgt ctgaatacaa tcgcttttcg aaaggaattt
    11341 ttgcttgggt aggattcgaa acagaatact tgccctatga aaatgttgag agggtcgctg
    11401 gcgaaactag ttggtctttc tggaaattgc tttcttattc tattgaagga atcatcaatt
    11461 tttcagatac acctttgaat attgcctcct atacaggttt cttcaccttc ctgctatcgc
    11521 tagttctaat ggtctttgtg gttttcaaaa ccttggtgtt cggagatcct acaattggct
    11581 ggccgtcgac tatttgtatc atcctatttt tgggaggtct gcagttgatg accattggta
    11641 ttctcggtaa atatttggca aaagttttct tggaaacgaa gaaacgtccg atttatattg
    11701 ttaaagagaa aagttcaaac taggagcagt ttatggaaca ttcagcttgg cacgaattga
    11761 taaaggcaca gttgccagag cattattttg gtaaaatcaa tcagttttta gattatgttt
    11821 atgctggtgg aaccgtttat ccgcctcgtg agaaggtatt tgctgccatt caaacaacgg
    11881 atttggaaga ggttaaagta gttattttgg gacaggatcc ctatcacgga cctggtcaag
    11941 cacagggctt gtcattttct gttccgaact cggtaccagc tccgccatct cttcaaaaca
    12001 tcttaaaaga attgacggat gatattggcg tcaaacaaga tcatgatttg acagcatggg
    12061 cggaacaagg tgtgcttttg ctcaatgctt gtttaactgt tccagcaggt caggcaaatg
    12121 gacatgcagg gcaaatctgg gagcctttta cggacgctgt tattaaggtg gtcaatagct
    12181 tagaccagcc tgttgtctat attctttggg gtgcttatgc tcgcaagaaa aaggcgttga
    12241 taaccaatcc aaaacatctg gttatcgaat ctgctcatcc aagccctctt tcagcctatc
    12301 gaggtttctt tggaagcaag cccttctcac aagcaaatgc ctacttgact tcacaaggca
    12361 gaacaggaat tgattggctg cgatagtaga tggtaatggc tttggtacta caaaggagaa
    12421 tatgaatgtt attagtgaaa aatggtcgag tattggatcc gcaatccggt ttagacaagg
    12481 tttgtgacat cttgatggac ggaagtaaga ttgttaagat tgcggagtcg atttcagaag
    12541 atgttgagca agaagtgatt gatgcgacag gattagtcgt tgctcctggt ttggtcgatg
    12601 ttcatgtgca ttttcgggag cctggtcaga cccataaaga agatattcat acaggagctc
    12661 tttctgcagc agcgggtggt tttacttctg ttgtcatgat ggctaacact aatccgacga
    12721 tttcaaatgt tgaaacctta aaagaagtat tggattccgc taaaaaagaa gctattcaca
    12781 tttatagtgt ggcaaccatt acagatcatt tcgacgggca aaatctgacc gattttcctg
    12841 ctttgctgga agctggagcg gtggcctttt cggacgacgg tattcctttg acaaatgctg
    12901 gcgtggttag aaaagctatg aaattggcca aagagcaggg ctgtctcatc agtctgcatg
    12961 aagaagaccc tgacctgaat ggtgtcttgg gactcaacga gcaagtggct gaaaaacatt
    13021 ttcatgtttg tggagcaaca ggcgtagcag aatacagcat ggtcgctcgc gatgtcatga
    13081 ttgcctatga aacaggtgcg cgtgttcata tccagcatct atccaaagcc gagtcggtca
    13141 aggtggttga atttgttcaa ggtctcggag caaacgtcac ggcagaagta gcaccccaac
    13201 atttttcacg aactgaggac ttacttctaa taaaaggtgc caatgctaaa atgaatccgc
    13261 cactacgatt agaaagtgat cgcttggctg tgattgatgg gttgaaatct ggtgttatct
    13321 ctgtcattgc gacggaccat gcacctcatc atgcagatga gaaaaatgta gaggacctta
    13381 cgcaagctcc gtcaggtatg acaggtttag aaacctcact ttcattaggt ctaactcatc
    13441 tggtagaaga tggacacctc actctcttgc aattgctgga gaagatgact attaaccctg
    13501 ccaaactcta cggccttgat gctggctatc ttgctgaaaa tggcccagct gatcttgtta
    13561 tttttgaccc aaatgcaaat cggttggtca cagcggattt tgcctcgaag tctgctaatt
    13621 ctccgtttgt tggtgatagt ctgaaaggac aagtccttta caccattgca aatggacaaa
    13681 tagtatttgg taaataggaa atgagtggat tagatagcta attcgcttat ttcgaacctt
    13741 tttgacatgt aagcggtttt aatgtttttg ttttttgtta aaaagtgtat aatagagata
    13801 taaaaaatgc cgaagaaagg tctatttatg aaaaagaaaa atatcttgtt gcctgtaatg
    13861 tccacactct tgttggctcc atttgtttta gctcaacaag tacaagctgc tgagacaacg
    13921 actgcagcta ccacaaccaa tcagccagca acgactgatg caactgctac ggtaccagca
    13981 acgtcagttg aaaacgtagc aacggaggaa acagttgtcc ctgctgcgga agaaacaata
    14041 gaggcagtta ttatccacac aaacgacgtt catggtcgca ttcttgaaga aaagaatgtc
    14101 atcggtgacg ctaaggctgc ggcagtcatt gaagaagaac gtgccaaagt agaaaataca
    14161 attgtagtag atgctggtga tgccttccaa ggacttccaa tttccaactc tacaaaaggt
    14221 gaagaccgcg ccaatatcat gaaccaagtc ggctatgatg caatggctgt tggtaaccac
    14281 gaatttgact ttgggatgga tcaagcaatc aagtacaagg aaactttgaa cttcccgcta
    14341 ttgagtgcta acacttacgt taatggtgct cgtgtttttg aagcttcaac tattgtcgat
    14401 aaaactccaa ctgttgtagg cgatgaattt gtagttatcg gtgtaacaac acctgaaact
    14461 gctacaaaaa cccatcctaa aaatgttgag ggagtaacat ttactgaccc agtcacagaa
    14521 gtcaataaag tgattgacga agtggaagca cgtgctctag cagataatcg tgtttacaag
    14581 aactatatca ttctagctca cctaggtgtc gattctacaa cacctgttga atggagaggt
    14641 tcaactcttg ctgaagcact ttctaaaaat agtaaattag ctggtaaacg tgttattgtt
    14701 attgacggtc attcccacac ggtagaagca actacctatg gagataacgt tacttataat
    14761 caaacaggct cttacttgaa caatattggt aaagtaacct tgaaatccga taaattattg
    14821 ggtgaagcta gtttgatttc tgccgcggat actaaaaacg tgacgccaaa tgctaaaatc
    14881 gcagccttgg ttgatgaaat taaagcaaaa tatgaagctg aaaatgctca agtagttatt
    14941 gaaaataacc cagtggaatt aaacggagac cgctcaaacg tgcgtgttcg tgaaaccaac
    15001 ttggggaatg cagtgacgga tgcgatctat gcttatggtc aaacaggatt ttcaaacaaa
    15061 actagccttg ctgtgactaa cggtggtggt ctacgtgcaa caattgctaa agatcagcct
    15121 gttacaaaag gtgatattat tgcagtcttg ccatttggta acattgtttc tcaaatcact
    15181 gtgactggtc agcaaattta tgatatgttt accaagtctt tatcatctac attgcaagtg
    15241 aatccagaaa ctggcgagat gcttttagat gaaaatggca tgccgctctt tgaagctagt
    15301 ggtggattcc tacacatttc aggagcaaat gtattctacg atccaactct tcctgtagaa
    15361 gaacgtgttc ttcttatcgg tattcttaat ccagagactg gcgaatatga cgccttggat
    15421 cttgaaaaaa cgtactattt agcaacaaat gacttccttg ctgctggtgg tgatggctac
    15481 acaatgcttg gcggagcacg tgaagaaggt ccttcaatgg acagcgtctt tgctgaatac
    15541 ctaaagacag ctgacttatc agcttatgag gttgtcaacc catattcacg tatcattcct
    15601 gtaaattcaa gcattgatac ggatgaagat ggctacccag actttatcga aattttattg
    15661 gatactgatc cagaaaatcc agcctcaaat ccagaaactg ttccagccga aaatacggat
    15721 tcaccatcta atcaagtaca aaatacttca gcaacggaca agaaggcccc agttgattct
    15781 ccgaaagtag gagataaaaa aacagaagta gcaagtccag caaaaactac aaaagcagga
    15841 gtcttgccaa atactggtga tcagatgaat ctgacgctca gcctgtttgg tttaggtctt
    15901 gcaggactgg ccgtggcagt aggtcgtaga aaagaaaatt aatcaatcat ctgaaaacag
    15961 ggtcttcgga ctctgttttt gactggagga aacatgcaaa ctgtatttca atatcaaaaa
    16021 gagagggatc gtgagcagat tagttcttac gttctgctta gcaactcccc acgtcgtaaa
    16081 caattattgg gatttttaca accacaaatc gcatcagttg aagtggatga gcgtggtatc
    16141 gaagaacatt ttatgaaaca attcgctaca gatgattttc tcactcgagc tgcaaaaacc
    16201 tgttgtgaaa tttccaaagc caaatcggac atggatttgg taactggtca tctctacatt
    16261 tctgcggata caatcgtcgt gtcagatggg caaattttta acaagcctca agatttgaca
    16321 gaagctgaaa ccatgttacg ttcctatttt ggaaagagtc atcacgttgt aacatctgtc
    16381 tgcctacgga caagacactc actagatgtt ttttatacgg ttgcacagat tgattttgtc
    16441 gactattatt cagcccttga agaggttatt caatcatata tccgtgaaaa gcagccactc
    16501 gacaaggcag gtgcatacgg tattcaggag ctggatccac gctttgtgtc gggcatttca
    16561 ggggatattc acaccattat tggtctacct gtagccgaag tttcccgcag gattttttct
    16621 gaagaaggtt ttgaaaaata gcagagctca atagctagtt tgtggtataa tagtggtcga
    16681 aaaggagagt ttatgaccgt cgacattgaa agatacaagc aattggccca gcagaagcaa
    16741 ggagaacatc gaaaatttct agcaaatttg aagaaaaaag cacctaaaaa tttggataga
    16801 attgttcaag atattcatgc cgaagtattt tctgaaatcg actgtacaga gtgtgccaac
    16861 tgttgtaaaa cgttgggacc actctttaca gaagcagata ttacccgaat tgccaagcat
    16921 ttgcgcatga aacttccagt ttttgaggat atgtatttgc atgtggatga ggacggagat
    16981 aaggtatttc aatccatgcc ctgtcccttc cttggaggcg ataatctatg tagtatctat
    17041 gatgctcgtc ccaaagcctg tcgagaattt ccgcatactg accgcaagaa gatttatcaa
    17101 atcaacaatt taacaataaa aaatactctg atttgtcccg cagcctatct ctttgtcgaa
    17161 aagttacggg agagaattta agaggaacaa gtaagacaaa atattgattt tctgctataa
    17221 taataaaaaa acaagccgtt tttacggctt ttttcaatga atcatattta ggaggacccc
    17281 atggcaatta ttcaatggtt tattggacat gtatgaaaag ccaatataat tgaaagaaaa
    17341 tttggtacct gttttttaga attaactcag cgtaaaagcc tgattctacg ggctttttta
    17401 gctttccttt ataatttttt aacattttga attacactaa ataattagca agtttattgc
    17461 tatttaatca aatattctca atacttttaa ctatttttgg tttatttttt ggtttgatta
    17521 tatcaataaa tctcattaaa tctatcatgt atcattcgtt ttaaacttat cgagcaatca
    17581 gaattcttct ggttgctttt ctttttaaag aatttttata ggaggtgtct atgaatgctc
    17641 tcttgtttga tgagcgacca attgtcgcaa atcctgtctt ggctagagaa ataggtttga
    17701 atgaagcaat tgttctccaa caaataaatt tctggcttga agttaataaa caaaatggga
    17761 aaaattacca tgatggtaga tattggacat ataattctat tcgggcttgg catgagtccg
    17821 atttttcata tcttagttat gaaacagtta agaggacttt ttcaaaacta gaaaaagcag
    17881 gttttctttt aactgccaat tacaataaag atccaagaga taaaaccaag tggtattcat
    17941 tggacttaga aagaattttt gaattacagg agatggtaaa aataaaaaga aatcaaattg
    18001 cagagaaagt attggatgaa ggaataaatt ctacattaac caatgcattg ggtcaaaatg
    18061 acccaatgga aaagttcaat ttgacacaat gcactcgttc aaaaagttct actgcattag
    18121 gtcagaacga cccaatacat ggtgtcaatt tgaaccaacc attaccaaat aagacaacaa
    18181 ataatacaac agaagatact tcattttata tcaatcaatc tattgaggag ggggatgaac
    18241 ttgagaaatt aaagaaacaa gtacagtatg aattattagt acagtcaggt tgtcgagaaa
    18301 aattatgtga atgggatgag gttctaccag tgatagctga tgtgttttat cagcatgatg
    18361 gaacaatttc tatcaatcag atgcgattgc cgattgactt tgtaaaagag cgatttagac
    18421 agctgacaat gtatcatatt gactacatct gcgagtgttt atcgaaggtc gatacaaaca
    18481 ttcgaaatat ccgagcttat attttaacaa cagcttttaa tgcacctcag actattggtg
    18541 cctattattc aaaccaagtg aaacaagatt ttggaggaaa taacttatga tttcaaaaaa
    18601 atgtaaattt tgtctgcgta aattaacaat tggactggtt tctctttcca taggacttat
    18661 atgtcttaat tctacacaac tttcatctgt aaattcattt acagtatatg ccaatgaagt
    18721 aatttctcat cgaaatgatg tagatgggag tagtaaagat tggggtactc taaatgggaa
    18781 tcaattcgtt gttgattata cagatacaag tttggagatt tctaaggggg cacattcgag
    18841 ccttactgag aattatcagg ctattcgtat tcctgaagct tatccataca aattattagt
    18901 caatggacaa cctaaaactt tgtcagattt taggcgtgat aaactcggta agctaatcgc
    18961 agagattgat ggtcgtgaag ttccattatt agattatgga atggttgaat atcaattgaa
    19021 ccgttattta ggtcaagata tttataatat ttacgggaac ctttcttaca ctgcatatgc
    19081 ttttctaaca agtcgaaatt ctcatcacgg gtattttgaa ttgacagaag cagacaatgt
    19141 acgagataca aatggtcaat tagtcacagg attttttcag actccacaat actatgaaat
    19201 ggcttcagca tatcagaaat caaatgcagg ctatttaaaa gtgcaggttg gtgacaagga
    19261 gttatcaact aacatcattg atggtagact aaaggggttg aaatcagcta ctaaaaaata
    19321 ttttttagtt ttaaacagtg agttttcaat agaaccacaa acagggaaat ctattaagca
    19381 tttgaaagaa cttactgaag aggaagttca acaattgaat ctgaccgacc aaaaagtaaa
    19441 ttcgaatatt gaatttataa ttgacggaaa aacatacaag acgagtggaa gaatcaactc
    19501 atggaaaaac tctacaatca atccgttaaa aactcgtctt gcaattatgt cgattggtga
    19561 tggaagcaac ctacatggat ttgatttatt tgcttctaat cacaactata ttgaggttgt
    19621 tgaaaaagtt gataacactc ctgttattcc tgaatcaatt tctaagaaaa ttgagtatgt
    19681 aacagaggat ggagaaaaag ttggtgacgg acatacaata accggcaaca aaggggatga
    19741 ggtaacactt gaagtgacac cacctaatgg ttatgtattt tccacaacac ctccaacaag
    19801 tataacactt aaagataata gttcatatca aattattgtg aatgaggtag ttggccagga
    19861 gactgttgaa aggaaagagg aaataaacta ccaggtaata cgtcaagaaa actcagaaat
    19921 gtatgaagat gaagaagtta ttgttagtaa aggtagtaaa ggtatcagaa taattcaaga
    19981 aacattcgaa acaagaaaag gtactagaac acaaaaattg cttgatacga aaactattat
    20041 aaataaagaa gcggtagacg aaatcattca gtatgggacg aaacaaattg aagatgaaca
    20101 agtaataaca agaacagaga ttgtaccatt cgatgtaatt gaagaatcag atccaaatat
    20161 gtatgaaggt gaagttgtaa ttgttactga gggtcagaac ggtgaggtaa ctattcatga
    20221 ccactataaa acgtttaagg gtgtaagaga tcctgaacca tttaattcag aatctactga
    20281 aacgaaaata aaagttaata aggttgtaag aattggaact aagaaaatag aaggagagac
    20341 tactgaaaaa aacagtgtaa taaccccatt tggagttctt gttgaggaag atgattcgtt
    20401 gtttgaggat gagcgaatta ttgtgagaaa tggcgttcca gggcttgtag atttagttac
    20461 aacttacaag acaaacaagg gggagaaggt tggtgaccca atcaatatat ctgaaaatgt
    20521 tgtaagagca ccagttgatg aagtggtcaa agtgggaaca aaaccaatag aatctatcac
    20581 tagttctgaa aaattgcttg atattccatt cgaagtggag aaaaaaatag atgacacact
    20641 tgaagaaggt attgagaaaa ctattcaaga aggtaaaaac ggtcagaaaa gagtgattgt
    20701 tgtaacgaat tacctaagag gtgttcaaaa tggtgacgtc caaattgaag aggaagtcat
    20761 tttggaacca gtaaaagaaa taatattggt tggtacaaag aaggtgcaaa aacagaatca
    20821 aactccgaac aaaaacgaga ctgatgataa ttcaaaatct ccaatcctac cacaggtaac
    20881 agagggtgaa aatggtaaac caaaaaatca agagtccaat cgatctgtat cagattatcc
    20941 agagaaatct aaagagaaaa ttagtcaaac gcaagcgaat ggtaatgaca attctggcaa
    21001 gaaaatagtg gctgaaaaat tgcccgaaac tggtgataca gttgtaaatc cttttctagt
    21061 catagtaagc agtttattgt gcctagttac ttcaataggg atgataatgt ggaaggataa
    21121 gaagtcagat gataaatgag gatgttggaa atcgtttagt tacattaaat cttcgtctgg
    21181 cgaaggtatc agctaaattg atagtagcag ctttaaaagt attggctaag gaggcagaat
    21241 caaaaaagtt atcagttaaa caatatttat cacataaaag tgaacaagga gaggttcctt
    21301 taaaagattt ggttggcaag ggttcactag agaatatccc tatgaaacat cctgaattac
    21361 ttgagttaaa aaaggagcta aataaacatg gtgttcggtt ctctatttta aaaaacaaag
    21421 agaacaaaaa ctttgaagta ttttttcaag cgaaagacac agctatatta gaacactcat
    21481 tcaaacaagc agttcaaaaa gctgaaagga aaacaagaat caagcagtca accttgaaaa
    21541 aaatcaaaca gtatcaaaaa tcccttggag aacagataat caaaccgaaa atcaaacaaa
    21601 aacatcaaga acagtcattg taggaggtga taggattgaa gtaatcgagc aaattaaact
    21661 tgacattcta aatagtattc caattggaga taggcgaaca cttattaaaa gttttattcc
    21721 ctatcttctt tttttctatc ttggaacctg tttaggccac catatccgaa gttttaaagg
    21781 gggcgatgta ttagataggc tatttcaagc aattttagaa attgaatcta tgagttggtt
    21841 attcattcca agttttgatg atttgcttat cggtattggt ttatctataa gcgtttgggg
    21901 agtgatgtat tcaaaaaagc gtcatgcaaa aaaatttaga cacggagttg aatatggttc
    21961 tgcaagatgg ggagatggga aagatattca accatatgag gatccaattt ttgagaataa
    22021 tattttgttg acaaatagcg aaaagctaac tatgaattcc cgaccgtcaa acccaaagtt
    22081 tgccagaaat aaaaatattc tggtggtagg tggctcaggc agtggtaaga ctagattttt
    22141 tgtaaaaccc aatcttatgc aaatgcattc gagttactgt gtaacagacc caaaagggac
    22201 gatagtttta gaatgtggca agatgttaga aagtaacggt tatcagataa aaatcttaaa
    22261 tacaatcaac ttcaagaaat ccatgaaata caaccctttc gcttatttga aaagcgagaa
    22321 agatattctc aagttagttc agacaatcat tgctaatact aagggtgagg gtgaaaaagc
    22381 tggagaagat ttttgggtca aggctgagaa actttattac acggcactta ttggttatat
    22441 ctactatgaa agtccgaagg aagaacaaaa ctttaatact ttacttgcaa tgttggatgc
    22501 tagtgaggtg cgtgaagatg atgagaattt taagaatgcc attgattatc tattcttagc
    22561 tttagaacgg aaaaagcctc atcattttgc tgtaaaacag tacaaaaagt acaagttagc
    22621 tgctgggaaa actgcaaaat cgatcttgat ttcttgtggt gcaaggttag caccttttga
    22681 tattgaagag ttgagagaat tgatgagtga tgatgagtta gaattggata ctcttggtga
    22741 ccgaaaaacg gcactctttg tcattatttc tgatacagat gacacattta actttgtggt
    22801 ttccattatg tactcgcaac tattcaattt actctgtgac aaggcggacg atgtttatgg
    22861 aggtcgatta ccagtacatg tacgttgcct attagatgaa tttgccaaca ttggtttaat
    22921 tccacgattt gaaaagttga ttgctaccat tcgttctcat gaaatttctg ctgctatcat
    22981 tcttcaagca aaatctcaac ttaaagccat ttataaagat aatgcagata caattatagg
    23041 aaactgtgat accgagttat ttcttggtgg caaagaagga actactctga aagaattagc
    23101 ggagaattta ggtaaagaaa caatcgatct atacaatact agtgaaacta ggtccaatca
    23161 gaaatcattt ggtctgaatt accagaaact aggaaaggag ctaatgtcac gagatgagtt
    23221 aaaagtcatg gatggtggaa aatgtattct tgagattcgt ggtacacggc cgttttattc
    23281 agataagtat gatattacca agcataagca ttacaaatta ttagaggatt ttgataagag
    23341 aaacaagttt gacatagaaa agtatctcaa gaaaagaggc ggagtcaaac taactgagaa
    23401 tacaaaggtt attcaattgt aggaggttgc ttatgaggat tagagcacca ccaacataca
    23461 caaaacgtaa agaaaaaata gaaagaggaa aattatggaa catgaaatga taaatattaa
    23521 cgctcatctt gtaaaagatg ttgtgttttc aagttttgaa tccgaggacg gaattgtccc
    23581 agttgtaaat ttctcccttg ttaaaaaata tggaaagggt aaggaataca ctaactgttc
    23641 tgcctatggt gataaggtag agattgcaaa agaatttgaa aagggagatc ttatccatgt
    23701 tttcggttac tttaaagaaa atcgtaaagg tgataaggta tacaagaatt ttattgttaa
    23761 atcaatgaat aaaattgaac aagatgaaat ggaggaagag taatggattt tttcacacaa
    23821 ggagtggacg tattaaaaac attggttatc gcaattggcg gtggtttagg tgcctggggc
    23881 gttattaacc tcatggaagg ttatggtaac gataacccag gagctaagtc acagggtatc
    23941 aagcaactga tggcaggtgg tggcattgtg ttaattggtt taaaactaat tcctctgctt
    24001 gctaatttaa tccaatagga ggagctatgt ttgatatatt cggaaaacta gaagagatga
    24061 ttcaagaaat tcttttggat atgataaaag ggactttgac aagtatgttt actgatttga
    24121 atcatcaatt agactttgta tctggtcagg tcggtcaatc gccaaaccag ttcaatgctg
    24181 aagtgttttc ctttatcaaa cacatcaatg atagtgtcgt actaccaata gctggtttgg
    24241 taattacagc tgtattatgt ttagaattga tccaagtagt gatgcaaaag aacaatatgg
    24301 cagaagttga tacgtttgaa tttttcaaat atgtcattaa gatgtgggtt gcagtatact
    24361 tggtatcgca tgcttttgaa tttgccatgg cagcatttga tatgggacag cacatgattg
    24421 gacaagcaac aggagtcatt catggcgaaa catctatatc atccgaacag attacagcaa
    24481 tggttgacag tttaaaagat aagaatattg gtgaattagc tggtattgtt tttgaacttc
    24541 aagcggttaa gctaacgata cagattattt ccttaatcat tcttatcatc acttatggaa
    24601 gaatgttcga aatttatgct tatagttcgg ttgctgcctt gccatttgct acacttggca
    24661 atagggagtg gggccaactt ggacataact acattcgtgg actgttcgca ttggctctgc
    24721 aaggtttgtt cctggttatc tgttttggaa tctatgcggt gttacttaga ggtgtaaaaa
    24781 tgacggatat tcatatgtcc gtcttttcca ttttaggtta tacagttctg ctaggattca
    24841 tgatgttgaa aactggtaca cttgcaaggt cgattatgaa tgcccactag agaggagagt
    24901 atatggccta cgttcaaatt ccaaaggatt tatccaaggt aaaaactaaa attgcattta
    24961 atttaaccaa gcgtcagtta attggttttt cattggcagg ctttgttagt ctgcctgttt
    25021 atttatcaat tagggaaagt gttggaaatg atttggcaat gttagtcttt attattcttg
    25081 ctttcccttt cttattttta actttttatg aaaaagatgg gttaacgagt gaaatctatc
    25141 taaagtatat tttcttacaa caacactatc agccatgtgt gcggtataaa agagcacttt
    25201 ataaagcaaa attcaaggag gaggtacatg agaccagaaa gaaaaagaaa acaggcacaa
    25261 gaatttcttg aagtgaagca ggcccaacta aaaaagatac aaaaggaaac agcaaaacag
    25321 gaaggaaatt cgtttgtagc ttctataaaa tcattttttg aattaggtga aaaatgtttg
    25381 actgtagaag atacaattcc tattgagaaa gtgtatgaga atgggatttg tcgactaact
    25441 gatggctatt ttactaaaat gattgctttt gaagacatca actaccaact agctttggaa
    25501 gagcaacgag attacatctt caatcaattt gcttcatttt taaatagttt tgataacaat
    25561 accagattgc aactctgttt tacgaatcaa cttggaaggt tagaagaatt agctgatgca
    25621 attacaatcc caattaaaaa tgacggactt gaggaaattc gaagtgagtt taggactatg
    25681 cttcaaaatc aattggagaa aggaaataat ggattaaggc agacaaagta tatcgttttt
    25741 ggtgtaaaag aggattcgta taggcaagca aaggttgtat tatcaaggct agaaattgac
    25801 ttacaatctc atttaaaatg gatgggaatt cgttctactg tattaaacgg ttttgaacgt
    25861 ttgattgtac ttcatcatat tttgaacccg actgagcact tatctacatt acctgatgaa
    25921 ttggaaaatc gggattgtcg ttctataatc gtaccagata aaattcactt tcagaagaag
    25981 tatttttcaa tggataatgt cctatgtcag actagtcatg tgcagatatt agcatcagaa
    26041 ttgtctgata gattcttaac tgaattactt tcactagagg agaacatggt tctatcattg
    26101 catattcaag ccttggatca agttgatgcg ataaagttag tcaaacgtaa gttcaccgat
    26161 gtgcaacgga tgacgatgga agagcagaag aaagcttatc gttctggtta tgatttagat
    26221 attattcctt cagacttgat gacctacggt actgatttga aacacctatt gaatgattta
    26281 caaagtcgtg acgagaagat gtttctcgtt tcgtttatca ttctaaacca aggattgtca
    26341 aaagctaaac tggacaatgc agtctcccag ttggcgacca tctgcagtcg ccacaattgt
    26401 atgcagaaat gtttggatta ccaacaggag cagggcttaa tatcagcact accattagga
    26461 atgaattgca tcaaaataaa gcgataatta acaacttcaa gcacagccgt atttattccg
    26521 tttacgactg aagaattatt catgacctct agtacatcca tctattatgg tctaaatgcc
    26581 attagtcata acttaatcat ggcagacaga aagaaactaa agaaccccaa tggtttaatc
    26641 ttggggacgc cagggtctgg aaaatcattc tcagcaaagc gtgaaatcac cagtgctatc
    26701 ttagtaactg atgatgatat tctcatctgt gatccggaag gagagtatgg tgctttagtt
    26761 gaagcatttg gtggagaggt tattcatgta tccgcaaaat caaaagattt cctaaatccc
    26821 ttggatatta actttaacta tggggatggg gatgcaccat tgaaggataa agcgaatttt
    26881 attatgtcta tgcttgaatt ggttgtaggt ggttctggtt taactgcagc agaaaagtca
    26941 gttatcgata ggtgtcttcc aaaaatttat gaagcgtatt ttgaaaaacc gataccagag
    27001 aatatgccaa ttttacaaga cctatatgaa ttattgttaa aacaggagga aagtgttggc
    27061 cggaaattag cgactgaaat ggaaatttat gtgacaggtt cccttaatgt tttcaatcat
    27121 cgttccaatg ttgacttgaa taagtccctc ttatgtttcg atattaaaga gttaggtacc
    27181 caattgaaaa agattggtat gttagttatt caagaccagg tatggaacaa ggtttcacaa
    27241 aataggcaga gccaaaagtc aactcgctat tatatagatg aatttcactt actactaaag
    27301 gaagaacaaa cagctcagta ttctgttgaa atttggaaga ggtttaggaa gtggggaggt
    27361 attccaactg gattaaccca gaacgtgaag gatttattgg caagcaaaga aattgaaaat
    27421 gtttttgata acaccgattt tatcatgatg ttaaaccagg cttctggcga tagagaaata
    27481 ttagctagaa agctaaaaat ttcaccttat cagctcaatt acgtgacaaa ctctaatgca
    27541 ggtgaggggc tactattctt tgggaatacc attgtcccat tcctagacca atttcctaag
    27601 aatacactct tgtatcaaaa gatgactacc aaaccagagg aggtcaagaa aggctaggtg
    27661 agaaatggga aagtcaaaac gaatggtccg agagaccaat aagaaacgct attctaaatc
    27721 taaacctgat ataggacaac ggaaagaagt acaagatttt tctgggagag cggttgatga
    27781 gaaagttcgc tttcagcacc aaattattca taagggaagt aaactagagt gtaaccatct
    27841 taaaggtgat acgtcagaaa aaaagaatca tattcacaaa aaatcaaatg ataaatccct
    27901 gcaaacacat tctaacaatc aagacgcaaa caaatcaact atacaacttg atagtttacg
    27961 aactaaaatg gttaatcagg aaagttcgca acagtctcat ctaccagaaa gattacaagt
    28021 tgaatcaagg ccaccgacac agaggagaca agttcaatta aatcaacgta attcttttga
    28081 aaatcaaaaa ttttcacaaa cacagaacga ctacgcaact actgtccaga ctagtttaca
    28141 ttccgaaatc aaaacaagtt ttgaggagga tattcaacca ccccctcttg agatggatgg
    28201 ccgacctcct gtcctgaact tgtaagtata catgaagact ttgttaattc aactgaatta
    28261 tatataaaga agcatgggga tatagagtca aaaactagtc atattcaggg aaaaagcgtt
    28321 tctctgagca atcagtcaga tgttggaaaa aatcccgaaa gtccatttcg tagatttgag
    28381 actaatcaaa gtagaatcgt tgatgcagac tcaaagtttt cccatcgtag aaatgagggg
    28441 gaaacaaaac ttattcatca ccaaagccaa gaaaatactt ctcaacttag aaaaaagaag
    28501 agaagaatac acggtcaagg tgtgttagtt aaagagcgtg gcaatatttt ctcagataga
    28561 cctttatcac catttgaaac tggtttagag ttatctcaaa atgaagcaga ttccactggt
    28621 tttgttgaga cagcttcaat aattgaaggt gataggaatg taaaagttaa tgatgattct
    28681 attctttcaa gtcggattat tccgggcaat agaaactctc aaatcatcat ttctgatgaa
    28741 tcaaaaaatc cgaatatcag aagaatgttt gtaaagaata gtcagcacct tcaaaatgat
    28801 aaaatggtta ctctaattga tgaagcttgt caaagttcag agcaatttca gccaaatctt
    28861 aatgataata caattacggt tggacaaaca gatctgtcta taaatgcctg gtcaaaaaag
    28921 ttacatcaat caaaatttag cctattctca agtaatattc tgcaatcaaa tgctgtcatt
    28981 gaaaaggtaa agattggaga gaatcagttt tcaacacgaa caagaaagca atcttcaagt
    29041 agacaggtaa aaaaggaagc aaaagtaatt gttgataagg gatctattct agattctact
    29101 aataacaaag atagtcaaat tgattcttta gtatccaaac ccacgtcaaa tactagccta
    29161 ttacctgttg atagaagacc aacttatgct ttgacaaaaa caactatgaa tcaaacatat
    29221 aaggggcgtc ttccgtcaaa aaataacatt aaggtaaaac caaataaacc actcagattt
    29281 ccaaatggac aggcacaagt acacgaaaag ataaattcat tagtaaatga acctattgaa
    29341 ttcgtcaagg ataggaagaa taaccgttta ttaaaaaaca ttgaaaaaag taaacttggt
    29401 cgaatccaaa aaactccata taaaaaagta atgtcagtaa tggccaatag tgagtttcta
    29461 gcagctagtt atcttcaagc gggggctgag gagaatgtgg cagtggatgc aacaacaaaa
    29521 gcgatgaata tccatgcaac tacaactatg aagattgccc aaaaatctaa tcgaaaaaag
    29581 actttgaaga aactgacaaa gaaggcaaag attagacaat cacagttgga gtttcgacat
    29641 aagtatcgtt tgttgaagga agataaaact tttaaacggc aatcattcta ccgcaaagcg
    29701 atgtatcgtc atcgaatgag gcaacaaata cgtaagaaac accttcctag attcagagac
    29761 aggataaaag aagaagcaat aaaaatactt aatcaattcg ttcaatacat tactacaaaa
    29821 tggaagagta tgttagtttt ggttttggct gtattttcac tgttgacggt tgtttattct
    29881 aatagtcaat ttatgttcgg tgcattatca tcagtttctt accaacttac cactacatct
    29941 tatttatctt cagaggaaat gctaattgcc ttgaatcaca ttttttctac ctatgaattg
    30001 actttatcca atcagttgac tagattgaag gaatcaaaac ctggatatga agaatacatt
    30061 gtaaaaggta gggaacaaat tggccatgat ccgcatgtct tattagccta tctgacagct
    30121 cgtttcggtg aaataaaaga ccaagcaagt gttgaacctg ctatgagaca attatttgaa
    30181 cagatgtatc aggttaccta ccgagaggag aaggaaatac ggtaccgaac agtcaaggaa
    30241 gaagtgcttg acacaagtgg gaagaaaact attgtagaaa aacgagttcc atatttgtat
    30301 cgaaaattaa tcgcaacggt ttctaaaaaa gatatggatg gtctagttca tgaaatattt
    30361 gcgagtaagc cacagaattt agagcattat aagatactac gagaatccaa agggaactta
    30421 gaagcttctt ttccttcagg tacagggatc agtcttccag gaaatgtatc atcagtttac
    30481 gacgtaaatt tgacaggtgg taattttcca ccaccaaatc ctagccatgt tgcagcctta
    30541 aacggtggtt accctgggca atgcacctgg tatgtatata atcgcttttc acaacttgga
    30601 aggccaatcc aacattcccc aatgggaaat ggaggagagt gggctttcta cgctgcaaaa
    30661 tacggttatc cagttagtcg ggaggctgca gtatgtatgc caccaactgt accctatgcg
    30721 gaccctacct acggtcatat tgcgtttgtc gagcgagtta atcctgatgg aagtatcgtt
    30781 atatcagaaa tgaatgttaa aggggagttc gtgatttcaa caggctatct tcctcgtgag
    30841 atggcggcac aatgttatta cataaatttt ggattataag gaggaatata tgcgtaaaga
    30901 tatccaaatg ttgcaaaaaa agaaagaaaa gttactagaa aaaaagcaaa aacttgacca
    30961 agatttggct caggttttgc aggatgaaca agatttaatt tatgaagagg tcattgttgt
    31021 ctttgaaaaa tcaaatctat cacttgaaga atttactaaa aaagttctat ttgaaaagga
    31081 gttgtcgcat gaaacgatta tttagttttg tgaggttcgc tgggttagtt atgcttttta
    31141 gtggttgcca aactatttat gcaagctcac caaatacaga cacaaatagt cagccagtag
    31201 caatttcggt caatcctcaa gcctccgagc aaagcaatgc taaggggcaa gttacagaaa
    31261 atgttgatgc taataatcaa gattatgaaa ttaccgaatc tgttgcaact aagcgacaat
    31321 ttgtcacatt cacgagtaaa tcaggtaagg tgtttcatct gattattgat catgataaag
    31381 gtggacagaa tgtccaatta ctaacagaag tttcagaaca ggatttgctt aacctaattg
    31441 aatcaactaa tacggttgca gtcaaaccac aaaagactga agaagttgtc gaagaaaaac
    31501 ctgccaagaa agaagaaccg aaacaaaatt cttcagttgg tagctatatt atcataggtc
    31561 tatttcttat aggagttttg tgtgcaggtt actatatgaa ggtcattaaa cccaaaaaag
    31621 aacacaactt tgatgagttt gaagaagatg atgattacgt aagtgaagga gaagaggaag
    31681 tttgacattg ttttcctttt ttgt
//
LOCUS       DASFQD010000008        31473 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.008, whole genome shotgun sequence.
ACCESSION   DASFQD010000008 DASFQD010000000
VERSION     DASFQD010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 31473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31473
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.008"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            58..534
                     /gene="tsaE"
                     /locus_tag="U1021_000291"
     CDS             58..534
                     /gene="tsaE"
                     /locus_tag="U1021_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEM4710887.1"
                     /translation="MTNYWGYGIIKDMYSQNENKLIAIGERIGKACKPNQVLVLSGDL
                     GAGKTTLTKGLAKGLKIEQMIKSPTYTIVREYEGTMPLYHLDVYRIGDDPDSIDLDDF
                     LYGGGLTVIEWGELLDVSLFDDYLLIRIEKEGDGRRLTVESHGAQSSDLAKEFQNV"
     gene            527..1054
                     /locus_tag="U1021_000292"
     CDS             527..1054
                     /locus_tag="U1021_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4710888.1"
                     /translation="MSEKEVYFSEAEPADAAAFIDFMNQVARETDYLVMDETGFRFSV
                     DEMETIFEAGIENPRELCLLAKVGSEVVGAISVKSSKQFRISHIGNIFIAVKKAYWGH
                     GLGTILLEEVLHWAEEMDVLKRLELTVQVRNQAAVHLYQKLGFNIEGTQIRGARTDEG
                     EWLDLYYMGKLIGEV"
     gene            1051..2244
                     /locus_tag="U1021_000293"
     CDS             1051..2244
                     /locus_tag="U1021_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HEM4710889.1"
                     /translation="MTIGKKIFLMSLAIIGLTVGAGLIYGASLLNFSTDAISKTFKQL
                     DGEEKITPIDATEPLTILLMGVDMDQATRGGDWEGGRSDSMILVTVNPKTKETNMMSL
                     TRDIMVEIAEANGESSGTVEKLNHSYSYGQAPMAIATIEKMMDINIDRYIEINMDGLV
                     ELVDAVGGIEVNNTLGFPISISEHEPAYTSIVQPGKQLVNGDQALVYARMRYDDPEGD
                     IGRQRRQREVITAIIKKLLQLDGFTQYKKILTAISNNMRTNIEISPATIPNLLGYKDS
                     ISKLNSYQLRGVDQMVDAIYYQLPTSTHLLEMQNVLKKSIGLEENTDLVTNVKVYEGQ
                     MGLPSPINVYDVYTNLLLLEASPWAESLDPEIGSPSATTTVTTEEQVTDFSTEPVLGD
                     ENGSQ"
     gene            complement(2353..2655)
                     /locus_tag="U1021_000294"
     CDS             complement(2353..2655)
                     /locus_tag="U1021_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HEM4710890.1"
                     /translation="MKLRNIILAVSAATASFLAVTHRDKIAKEVQETKQLLSDIQLNK
                     DNIQEQLAIIQSFQEPLQEMASDLQYKTRVYQQSIAGNLEEIQQILKKYQNENNTP"
     gene            complement(2657..3070)
                     /locus_tag="U1021_000295"
     CDS             complement(2657..3070)
                     /locus_tag="U1021_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEM4710891.1"
                     /translation="MSDCIFCKIISGEIPASKVYEDDQVLAFLDITQATKGHTLVVPK
                     KHYRNVLDMDKEAAATLFSVVPTIARQLKEKLGASGLNIVNNNEEAAGQTVFHTHIHL
                     LPRFNNQDGLSIQFKANDPDFPALAQLAQELYLGE"
     gene            3133..3867
                     /locus_tag="U1021_000296"
     CDS             3133..3867
                     /locus_tag="U1021_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4710892.1"
                     /translation="MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTI
                     KEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIPETPSLYEELTLKEHLEVVAMAY
                     DLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
                     LGLDPVAISDLIALLGEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEE
                     LQSAFGMDGASLNEIYLALTQEGVAG"
     gene            3864..4904
                     /locus_tag="U1021_000297"
     CDS             3864..4904
                     /locus_tag="U1021_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4710893.1"
                     /translation="MKELFQQRRLDFLNRCSKYLRYVLNDHFVLVLMVLLGFLSLQYR
                     QLLLSFPENPLPIVFVVIAISLLVLVSGRIATYLEEADQIFLLTKEKDILQGLEVAAR
                     CTVLFWSSIQVVVQLVLLPIYLKLGLPVWMIVAGLLTLLVLKCLFVKRQLVAYQSQGV
                     LDWSKAIQDEQKRKQSILRFFALFTTVKGISTTVKPRSYLNGILRLVKSRQTWFYLYL
                     RAFLRSGDYLGLTIRLLLLAILSLFAIEESWLSIGLVLVFHYLLVFQLLGLYKHYDYQ
                     YITQLYPLEKDSKKIGLQNLLRVILYSLLLVELGFALLFSKENTMVVVLLLVGIFLHE
                     IYLPLKLKKLID"
     gene            4954..5748
                     /locus_tag="U1021_000298"
     CDS             4954..5748
                     /locus_tag="U1021_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HEM4710894.1"
                     /translation="MQFDTSGLQLQSIAGNSGKAFKGLRSDGTPVFVKYEMPPIVSAL
                     AREQITPPVLSANREVGMGHRVEQEWLNGRTLERQDMTSKQIRQILVRMHYSRILLNQ
                     ALQMNYTYMEPQDLVYRWQEEAPTRLGQNSYLQSICQDLLNNLPRFRQEVATFVHGDL
                     HHSNWVETTSGLVYLTDWETACVTDRMLDVAYILTHYIPRQSWEEWLRAYGYKYNSTV
                     LNKVYWYGQLGYLNQIAKHVESYNVLAANKEIYALRQFRQSFYKEV"
     gene            5745..6383
                     /gene="trmB"
                     /locus_tag="U1021_000299"
     CDS             5745..6383
                     /gene="trmB"
                     /locus_tag="U1021_000299"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001239380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEM4710895.1"
                     /translation="MRVRNRKGASELLANNPQYVISNPEECKGKWAEIFGNNNPIHIE
                     VGSGKGRFVTGMAAQNPDINYIGIDIQMTVLSYALDRVLEAGLPNIKLLQVDGSSLTN
                     YFAPAEIDQLYLNFSDPWPKKRHEKRRLTYKSFLDTYKEILPEKGEIHFKTDNRGLFE
                     YSLASFSQYGMVLKQVWLDLHADGLEGNVMTEYEEKFSNKGQVIYRVEAQFQ"
     gene            6641..7111
                     /gene="rimP"
                     /locus_tag="U1021_000300"
     CDS             6641..7111
                     /gene="rimP"
                     /locus_tag="U1021_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEM4710896.1"
                     /translation="MSSIIELVTAAITPAIQTPYELVDVEYGKMGGDYVLSIFVDKEG
                     GISLQDTADLSEKISPILDTIKPDPFPDQYMLEVTSPGLERPLKTADAVEKAVGKYIH
                     VKLYQAIDKIKVFEGTLLSFDGTDLIMEYMDKTRKKEVTIPYQTVAKARLAVKL"
     gene            7184..8326
                     /gene="nusA"
                     /locus_tag="U1021_000301"
     CDS             7184..8326
                     /gene="nusA"
                     /locus_tag="U1021_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEM4710897.1"
                     /translation="MSKEMLEAFRILEEDMGINKADIIDAVTESLRSAYKRRYGQSES
                     AVIEFDEKKGDFHVFTVREVVDEVFDSRLEISLKDALAISSAYEMGDKIKFQEDPAEF
                     GRVAAQSAKQTIMEKMRKQKRAITFNTYKQHENEIMSGTVERFDNRFIYVNLGTIEAQ
                     LSKQDQIPGEVFQSHDRIEVYVYKVEDNGRGVNVFVSRSHPEMIKRLMEQEIPEVYDG
                     TVEIMSVAREAGDRTKVAVRSHNPNVDAIGTIVGRGGSNIKKITSKFHPARYDAKNDR
                     MIPTEENIDVIEWVADEAEFIYNALAPAEVDQVLFDTEDGKHATVVVPDDKLSLAIGR
                     RGQNVRLAAHLTGFRIDIKSASEYEAFEATQYATDEVVEEVAEEQE"
     gene            8343..8639
                     /locus_tag="U1021_000302"
     CDS             8343..8639
                     /locus_tag="U1021_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006531117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HEM4710898.1"
                     /translation="MAKARKIPLRKSVVSGEIIDKRDLLRIVKNKEGQVFIDPTGKAN
                     GRGAYIKLDNDEASQAKKRRVFDRSFSMEVAEEFYDELIAYVDHKIKRRELGLE"
     gene            8596..8934
                     /locus_tag="U1021_000303"
     CDS             8596..8934
                     /locus_tag="U1021_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016399195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxQ-related RNA-binding protein"
                     /protein_id="HEM4710899.1"
                     /translation="MLIIRSRGENLDSNKRQKILNLLGLAQRAGRLVSGEDLVVEAIQ
                     KGQAKLVFLAEDAAGNLSKKVTDKSHTYQVEVVTVFSTLELSAAVGKARKVLAVTDAG
                     FTKKMRSIME"
     gene            8952..11759
                     /gene="infB"
                     /locus_tag="U1021_000304"
     CDS             8952..11759
                     /gene="infB"
                     /locus_tag="U1021_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEM4710900.1"
                     /translation="MSKKRLNEIARELGVSSKEVVAKAQELGFEVKSHASSVDEASAK
                     RLAESFGGQKSEATKVAAKVSQPEKVDETPKVETAKVEKAKETQPVVKEEVAASTVQS
                     APHRPQSRNFKAEREARAKEQAAKRAQGQGKGGQAKSGQDRRDNRQQGQGRSNNERND
                     RRDNRREQGSDKRKDNRFGDRRDNRDNRSGQSARFEQRAAAKPAGPKIDFKARAAALK
                     AEQNAEYARTSEERFRQAQEAKKQPKKPKEIKFEEPVVESKPFVKPAPVASVPEQVAE
                     TTVDTRRKKQARPDKKRDFNGDEEDGPRKQQRNRNSQNQVRNQRTSNWNNNKKNKKGK
                     ANQPAKPVTERKFHELPTEFEYTAGMTVAEIAKRIKREPAEIVKKLFLMGVMATQNQS
                     LDGDTIELLMVDYGIEAKEKVEVDSADIERFFVEEGYLNEEEMTERPPVVTIMGHVDH
                     GKTTLLDTLRNSRVATGEAGGITQHIGAYQIEEAGKKITFLDTPGHAAFTSMRARGAS
                     VTDLTILVVAADDGVMPQTIEAINHSKAANVPIIVAINKIDKPGANPERVIGELAEHG
                     VISTAWGGESEFVEISAKFNQNIDELLETVLLVAEIQELKADPTVRAIGTVIEAHLDK
                     GKGAVATLLVQQGTLNVQDPIVVGNTFGRVRAMTNDLGRRVKTAGPSTPISITGLNEA
                     PMAGDHFAVYEDEKSARAAGEERAKRALLKQRQATQRVSLENLFDTLKAGEVKSVNVI
                     IKADVQGSVEALASSLQKIEVEGVRVNIVHSAVGAINESDITLAEASNALVIGFNVRP
                     TAEARSQAEADDVEVRLHSIIYKVIEEMEDAMKGMLDPEYEEKIIGEAIIRETFKVSK
                     VGTIGGFMVVRGKVTRDSSVRVIRDGVVVFDGKLVSLKRYKDDVKEVGNAQEGGLMIE
                     NYNDLKVDDTIEAYIMEEIKK"
     gene            11915..12268
                     /gene="rbfA"
                     /locus_tag="U1021_000305"
     CDS             11915..12268
                     /gene="rbfA"
                     /locus_tag="U1021_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEM4710901.1"
                     /translation="MANHFRTDRVGMEIKREVNEILQKKVRDPRVQGVTITDVQMVGD
                     LSMAKVYYTIMSNLASDNQKAQTGLEKATGTIKRELGRKLTLYKIPDLVFEKDQSIEY
                     GNKIDQMLRALDQKD"
     gene            12550..13215
                     /locus_tag="U1021_000306"
     CDS             12550..13215
                     /locus_tag="U1021_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin lysis protein"
                     /protein_id="HEM4710902.1"
                     /translation="MKTFISKLMLVSTVVLLAACQSNQVKGGESSSASSQVSDGSSLQ
                     QASTIASSSETQASSVTTPELSEVYQSVIDRYQANMGQPAEAINQDEVSSYLSLLTSQ
                     GQEYSGIFYSLYDVNHDGTEELLLALDKSGEYVLIDLYTQLTDESLRLVDNFRNLGFE
                     IGPDALLRPLQDGTYLFEGDGIFRIYQYNAMIPGLKRISESDTNPETSPLLELKSLHW
                     VKL"
     gene            13384..14535
                     /locus_tag="U1021_000307"
     CDS             13384..14535
                     /locus_tag="U1021_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate-binding domain-containing protein"
                     /protein_id="HEM4710903.1"
                     /translation="MKTNLKKLLYSGVTLMSLGVLAACSSTSSSTTTSSSAATSQTSV
                     ATTSNNSTSSDSNSSTIDWSALPTTEVTLSNDGLKITEGGTYILTGSTTAGVTVETDA
                     NVRIILAGAEISSSDTAAINVINADNVELEIKDGTTNTVKDTSNHTDTNIEGAIHVEA
                     DLTITGNGSLTVEGNFQDGIVSTDDLVITAGTIKVTAVDDGIRGKDSLTINGGTINVT
                     AGGDGIKSTNDTDTTKGYTTITGGEITVKAGDDGIKAETALTIDGGTITVSESVEALE
                     GTNITINGGTIDVYGSDDAINAASTTSSEIFIKVTGGDLKVAVGSGDTDAFDANGDIY
                     ISGGTIAVTAPTSAFDFDGTAELTGGTVTVNGEQITQITATGPGGRGGW"
     gene            complement(14574..15233)
                     /locus_tag="U1021_000308"
     CDS             complement(14574..15233)
                     /locus_tag="U1021_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HEM4710904.1"
                     /translation="MEFDLFLMICNYIGTIAFAVSGAVKGFKKKLDIFGISLLGIITA
                     VGGGIIRDTMANRIPAALTDPTAIYLSLGVAISMYLIVINLKQDKPPGKKMIHFLSQT
                     NLIFDAIGLAIFALIGASTGISLQLNALTSGILAALTGVGGGIARDLLVNETPIVLKE
                     DVYAVLAFFSGVLYHLCVVNWKLPQIPTFITIFTISLIIRLLVIKYKINLPNMESKRK
                     V"
     gene            15465..16433
                     /locus_tag="U1021_000309"
     CDS             15465..16433
                     /locus_tag="U1021_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000258167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HEM4710905.1"
                     /translation="MVSISKEQHLDMFLKMQQIRDVDMKLNKLVRRGFVQGMTHFSVG
                     EEAAAVGPIAGLTDEDIIFSHHRGHGHVIAKGIDINGMMAELAGKATGTSKGRGGSMH
                     LANVEKGNFGSNGIVGGGYALAVGAALTQQYLGTDNIVIAFSGDSATNEGSFHESMNL
                     AAVWNLPVIFFITNNRYGISTDISYSTKIPHLYQRAAAYGIPGHYVEDGNDVIAVYEK
                     MQEVIEYVRAGNGPAMVEVESYRWFGHSTADAGVYRTKEEVNEWKAKDPLKKYRKYLT
                     ENKIATDEELDAIEAQVAEQVEASVKFAQESPDPDISVAYEDVFVD"
     gene            16694..17689
                     /locus_tag="U1021_000310"
     CDS             16694..17689
                     /locus_tag="U1021_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000005088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEM4710906.1"
                     /translation="MAETKVMALREAINLAQSEEMRKDEKVFLMGEDVGIYGGDFGTS
                     VGMLDEFGPKRVRDTPISEAAIAGSAVGAAQTGLRPIVDLTFMDFVTIALDAIVNQAA
                     KTNYMFGGGLKTPVTFRVASGSGIGSAAQHSQSLEAWLTHIPGIKVVAPGTANDAKGL
                     LKSSILDNNPVIFLEPKALYGKKEEVNLDPDFYIPLGKGEIKREGTDVTIISYGRMLE
                     RALKAAEEVAAEGISVEVVDPRTLIPLDKELIIESVKKTGKVILVNDAYKTGGFIGEI
                     ASIITESEAFDYLDAPIIRIASDDVPVPYANILENAVLPNVEKIKAAIYKQVNKG"
     gene            18164..19552
                     /locus_tag="U1021_000311"
     CDS             18164..19552
                     /locus_tag="U1021_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002885106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase"
                     /protein_id="HEM4710907.1"
                     /translation="MAIEIIMPKLGVDMQEGEIIEWKKQEGDFVNEGDVILEMMSDKT
                     SMELEAEESGVLLKIVHGNGATVPVTEVIAYIGAEGETVEAGASSAPAVEPAAAIEEV
                     PAGRTPVIVAPATAAKPQGSGKVRATPAARKLARELGIDLGLVPGTGANGRVHKVDVE
                     DFKGAAPKATPLAARIAADQGVDLSTLTGSGVNGKIVKNDVLAVLAPVAVETAAPVPK
                     AEEKPAKELPEGVEIIKMSPMRKAISKGMVNSYLTAPTFTLNYDIDMTNLMALRKQVL
                     EPIMNKTGLKVTFTDLIGLAVVRTLMKEEHRYMNASLINDAQEIELHKFVNLGIAVGL
                     DDGLVVPVVHGADKMSLSDFVVASKDVIKKAQSGKLKGAEMSGSTFSITNLGMFGTKT
                     FNPIINQPNSAILGVASTVQTPVVIDGEIKIRPIMALCLTIDHRIIDGMNGAKFMVDL
                     KNLLENPLELLI"
     gene            19826..21586
                     /gene="lpdA"
                     /locus_tag="U1021_000312"
     CDS             19826..21586
                     /gene="lpdA"
                     /locus_tag="U1021_000312"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002984864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEM4710908.1"
                     /translation="MAIEIIMPKLGVDMQEGEIIEWKKQEGDFVNEGDVILEMMSDKT
                     SMELEAEESGVLLKIVHGNGATVPVTEVIAYLGAEGESVEVGSAPAPAEVAQATADLK
                     AAGLEVPAAPAAAPQAPKAELAADEYDMVVVGGGPAGYYAAIRGAQLGGKIAIVEKSE
                     FGGTCLNKGCIPTKTYLKNAEILDGLKIAAERGINLASTNYTVDMDKTVDFKNKVVKT
                     LTGGVQGLLKANKVTIFNGLGQVNPDKTVVIGDKVIKGRSIILATGSKVSRINIPGID
                     SKLVLTSDDILDLREIPKSLTVMGGGVVGVELGLVYASYGTEVTVVEMADRIIPGMDR
                     EVSVELQKVLSKKGMKFLTSVGVSEIVEANNQLTIKLNDGSEIISEKALLSIGRVPQL
                     AGLENLHLELDRGRIKVNAYQETSIPGIYAPGDVNGTKMLAHAAYRMGEVAAENAIHG
                     NHHKAKLDFTPAAVYTHPEIAMVGLTEDQAIEKYGKENILIGRNSFTGNGRAIASNEA
                     HGFVKVIAEKKYHEILGVHIIGPVAAEMINEAATIMESELTVDDVAASIHGHPTFSEV
                     MYEAFLDVLGVAIHNPPKRK"
     gene            21726..22571
                     /locus_tag="U1021_000313"
     CDS             21726..22571
                     /locus_tag="U1021_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4710909.1"
                     /translation="MRKIIFLDVDGTLVDYHNRIPESAIRAIRQARENGHLVYVCTGR
                     SRAEMQPELWEIGLDGMIGGNGSYVEHQDQVIMHQLLSEEDSRAIVDWLHERGLEFYL
                     ESNNGLFASENFRERARETLRIYSMNKGKTAEEVADQEVEDVIHGMIFDGQLYRNDLN
                     KVSFVLDSYQDHLDSKQAFPQLVANTWGGRGESALFGDLGVKDIDKAHVISVLLDYLG
                     ASQADTIAFGDAKIDISMLDYCAVGVAMGNGGAEILAMADMITDDVEEDGLYNAFERL
                     GLLDK"
     gene            22750..23548
                     /locus_tag="U1021_000314"
                     /pseudo
     CDS             22750..23548
                     /locus_tag="U1021_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002303877.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
     gene            23748..25658
                     /locus_tag="U1021_000315"
     CDS             23748..25658
                     /locus_tag="U1021_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HEM4710910.1"
                     /translation="MAKDYTDLATDIVAHVGGKENISSLKHCVTRLRFGLKDESKADT
                     DYLKARDGVVTVVQAGGQYQVVIGNHVPDVYVAVQKVAGISGDGALDIDEGDGPKGNL
                     FDRFVDLVSGVFQPSLGVLAAAGIIKGLVSILAATMGLNNDNSALYAILNTAGDGFFQ
                     FLPIVLAFNAARKFRMNEFTGMAIAMALVYPTLPGTFATLKEAGLNNVFGIPFVLPAA
                     GSYLQTVMPVLLAVWIASHIEKFMKKITLDVVKVFIVPFVTILISVPLTFLVVGPVAN
                     YASDLLSAGFTAVMGFSPLLYGILLGALWQVMVMFGLHWALVPLAILQFSQNGWSNIL
                     LAAALPNFTQTGVLLAIMMKTKESKVKSVAMPAFISSIFGVTEPAIYGVTLPMKTPFY
                     ISCAVSAVIGAGLSFFDLKNYAMGALGIFMYPGYVSPELGVTPMWIMMGFSLAAIVAS
                     FAIQMALPVPYLYGEPTEKKSVEETKESVPELKEIKQEIIASPLIGKVVKLEDVPDAV
                     FASGAMGKGIAIDPLDGILVSPAKAEITLVFPTKHAIGLRTENGAELLIHIGMDTVSL
                     AGKGFESFVQVGDQVEAGQKLLEFDLHQIKAADLPVITPIIVTNTADYEDILVTQESQ
                     INSGDYLLTTVK"
     gene            25852..27527
                     /locus_tag="U1021_000316"
                     /pseudo
     CDS             25852..27527
                     /locus_tag="U1021_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018364488.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase/lipase family protein"
     gene            complement(27642..27971)
                     /locus_tag="U1021_000317"
     CDS             complement(27642..27971)
                     /locus_tag="U1021_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEM4710911.1"
                     /translation="MITMHLYYTGPADNARAFAQEMEASGIADRIRQQAGNTRYQYFA
                     PLDDPHSILLVDSWTDQAALDIHHASPMMQEILDLRSKYQLTVTAERYQSDETGIPER
                     DKDFLQR"
     gene            complement(28221..29135)
                     /locus_tag="U1021_000318"
     CDS             complement(28221..29135)
                     /locus_tag="U1021_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM4710912.1"
                     /translation="MQPPLTDKQFKHTIDYDSRLLPYKYYHTCVMDGIPDILFHWHNE
                     FEINYVYGGTARYHIDYDYFNSQAGDIILIRPNAAHSIHPIEQRGHETDTLLFHLDML
                     GASQLDHTSMLYLQPLQTDVFKCILRIQPQDPGYAEIRQCLLTIFELVRHQPPYFELP
                     LKSRLFDFFYLLYRYRYIVRKNTDDMYRKNEKLRLLIEHIQQHYAENLTIEQLAEQMG
                     YTKTHFMTIFKQQTGTSCMEFIIQVRLRAATELLTNTLKPVLEIATEVGFNNLSNFNR
                     QFKQYYHTTPSSYRKQLRKNRTYTNFDK"
     gene            29247..30728
                     /locus_tag="U1021_000319"
     CDS             29247..30728
                     /locus_tag="U1021_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000110363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HEM4710913.1"
                     /translation="MSRFPKNFLWGGAIAANQAEGAYNVDGRGLVQTDVTTGGTVNSP
                     RYTTYIDKDGKPGKYASMGHAGGHLPEGATYAVLEDHYYPNHKAVDFYHRYKEDIKLF
                     AKMGYSVFRLSISWARIFPNGDDAEPNQAGLDFYRSVFEECRKYGIEPLVSIWHFDIP
                     LNLEQRYGGWTNRKLIDFYVRYAETIFNEYKGLVKYWITFNEINNTIMFLDMFSEPKD
                     SDYQDAYQHLHHQFVASAKAVKLGHQIDPSYRFGNMICGITFYPGTCDPADILENQHK
                     WEQNIFYCSDAQAKGRYGSYANRLWKEHNVVLQMEEGDLDILAEGKVDMYTFSYYMST
                     VVTTHKVEDTVSGNFSIGAKNPYLTYSDWGWAQDPTGLQYYLEKIYDRYEIPLMVVEN
                     GLGALDTVEEDGSIHDDYRIDYHRAHVNAMADAIANGVDLIGYTTWGCIDLVSAGTGE
                     MRKRYGFIYVDMDDAGNGSLARTPKDSFYWYKKVIASNGEDVE"
     gene            30966..31349
                     /locus_tag="U1021_000320"
     CDS             30966..31349
                     /locus_tag="U1021_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002962841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM4710914.1"
                     /translation="MKIEHVAIYTQDLEGMRNFFENYFNATSNQLYHNLKTSFKSYFL
                     TFEDGARLEIMTRDDVVDKPSQLNYLGLIHLAFSLGSEEAVDELTERLVAAGYLLLSG
                     PRITGDGYYESCVLGFDDIQIELTV"
BASE COUNT         9482 a         5691 c         7382 g         8918 t
ORIGIN      
        1 cgcaggctct ggcttgcgat tttttctgtc gacttgtcta caatttccag tagacctatg
       61 acaaactact ggggctatgg tataattaaa gacatgtata gtcagaatga aaataaattg
      121 attgccattg gtgagagaat tggaaaagcc tgtaagccaa atcaagttct agtattatca
      181 ggggatttgg gtgctgggaa aacaactctg accaagggtt tggccaaggg tttaaaaatt
      241 gaacagatga ttaagagtcc tacttatacg attgtgcgag agtatgaggg gaccatgcca
      301 ctctatcact tagatgttta tcgaattgga gatgaccctg actcgattga tttggatgat
      361 tttctctatg gaggaggtct aacggttatc gagtggggag aattactgga tgtcagtcta
      421 tttgatgact atttgctcat tcgtatagag aaagagggag atggtcgacg attgacagtc
      481 gaatctcatg gagctcaaag tagcgattta gcgaaggagt tccaaaatgt ctgaaaaaga
      541 agtgtatttt agtgaagctg aaccagctga tgcagcagct tttattgatt ttatgaatca
      601 agttgctaga gaaacggatt atctggtcat ggatgagact ggttttcgat ttagtgttga
      661 tgaaatggag accatcttcg aagcaggaat cgaaaatcct cgtgaattgt gcctgttggc
      721 taaggttggt tcggaagtcg tcggcgcaat ttctgttaag tcctctaagc agtttcgcat
      781 tagccatatc ggaaatattt ttattgcagt aaaaaaagcc tattggggtc acggtctagg
      841 gacgatttta ctggaggaag tattgcattg ggcagaggaa atggatgtat tgaagcgttt
      901 ggaattaacg gttcaggttc gcaatcaggc ggcagtacat ttatatcaaa aactaggatt
      961 taacattgaa ggaacccaga tacgtggggc tagaacagat gaaggagaat ggcttgatct
     1021 ttattatatg ggcaagttaa ttggtgaagt atgacaattg gaaaaaaaat attcttaatg
     1081 tctttggcta ttattggttt aacagtaggt gctggcttaa tatatggagc cagcttgtta
     1141 aatttttcta cggatgctat ttcgaaaaca tttaagcagt tagatggaga agaaaaaatc
     1201 actccgattg atgcgacaga gcccctaact atcctactga tgggggtgga tatggaccaa
     1261 gcaacccgtg gaggagattg ggagggtggt cgtagtgatt cgatgatttt ggtaactgtt
     1321 aatcccaaga ctaaggaaac caatatgatg agcttgactc gtgatattat ggttgagatt
     1381 gcagaagcga atggggagtc ttcaggaacg gttgaaaaac taaatcattc ttatagctac
     1441 ggacaggcac cgatggccat tgccacgatc gaaaagatga tggatattaa cattgaccgc
     1501 tatatcgaaa taaatatgga tggtctggtt gagcttgttg atgcggttgg aggtattgag
     1561 gtaaacaata ctcttggctt ccctatatcc atttcggaac atgagcctgc ctacacctct
     1621 attgtccagc cggggaaaca gttggtaaat ggggatcagg cgctggttta tgctcggatg
     1681 cgctatgatg atcctgaggg ggatattggt cgtcagagac gtcaacgtga agttataacg
     1741 gctattataa aaaaactcct tcagttagac ggttttaccc agtataagaa gattctgact
     1801 gccatttcta ataatatgcg aaccaacatt gagattagtc ctgcgacaat tccaaatctc
     1861 ttggggtaca aggactctat ctccaagttg aattcctatc agttgcgcgg tgtggatcaa
     1921 atggttgatg caatctatta tcaattacca accagtacac atctattgga aatgcaaaat
     1981 gttctgaaaa aatctatcgg cttagaagaa aataccgact tagtcacaaa cgtgaaggtc
     2041 tacgaaggac agatgggatt gccaagtcca ataaatgttt atgatgtata tacaaatctc
     2101 ttgctgttag aagcaagtcc atgggcagaa agcttggatc cagaaatagg gagtccatcg
     2161 gctactacga ctgtgacaac agaagagcag gtaaccgatt tttcaacaga gccagtactc
     2221 ggtgatgaaa acgggtcgca ataatgtagt cattcagttt ttcttttatt actttgacga
     2281 gcgagtataa aagcctataa aaatagaggt tgtttgcaac ctctattttt atatatttgg
     2341 aaattcccta tgtcagggag tgttattctc attctggtat tttttgagaa tctgttggat
     2401 ttcttccaag tttcctgcaa tactttgctg atagactcga gtcttatatt gtaagtcaga
     2461 agccatttcc tgcaagggtt cttgaaaact ttggataatg gcaagttgtt cctgaatatt
     2521 gtccttgttc agttgaatat ctgatagaag ttgtttggtt tcctgtactt ctttagcgat
     2581 tttatcccga tgcgtgactg caaggaagct ggcggtagcg gcgcttacgg ctaaaatgat
     2641 attacgaagt ttcatattat tctcctagat agagctcttg tgccagttga gccagggctg
     2701 ggaagtcagg gtcgttggct ttaaattgaa tgctcaatcc atcttgattg ttaaagcgtg
     2761 gtaagagatg gatgtgtgta tgaaagacgg tttgcccagc ggcctcctcg ttattattaa
     2821 cgatgtttag accactagct ccaagttttt cttttaactg acgagcgatg gttggcacaa
     2881 cagaaaagag tgtggctgca gcttctttat ccatgtcaag cacgtttcgg tagtgttttt
     2941 tagggacaac caatgtgtgt ccttttgtgg cctgagtgat gtctaaaaag gctaatactt
     3001 ggtcatcttc atagactttt gaagctggta tttctccaga gataattttg caaaaaatac
     3061 aatccgacat aatggcaacc tctttctggg atttttgtta taataattat atcaaattgt
     3121 aggaagaaat gtatgttaga agtaaaaaat gtaactggag gatatgtcaa tatcccagtt
     3181 ttgaaagatg tatcttttac cgttgaggat ggtcaattag ttggtctaat tggtttaaat
     3241 ggtgcaggga aatcaacgac tattaaggaa attatcggtc ttttgacccc ctatcaagga
     3301 cagattgcaa ttgacggcct aactttgcta caaggggctg aaaattatcg gaagaagatt
     3361 gggtttatcc ctgaaacacc aagtttgtat gaagaactaa ccctcaaaga gcacttggaa
     3421 gtggtagcaa tggcctatga tttatcctgg gagcaagctt ggggacgtgt tgagcacttg
     3481 ttaaaactgt ttcgcttgga tgagaaattg gactggtttc ctgtcaattt ttcaaaggga
     3541 atgaagcaga aggtcatgat tatttgtgct tttatggtgg agccgagtct attgattgtt
     3601 gatgagcctt ttctgggatt agaccctgtg gctatctctg atttaatcgc tcttttgggg
     3661 gaagaaaaat ctaagggcac ttcaatcctc atgtccactc acgttcttga ctcagctgag
     3721 aaaatgtgcg actcttttgt gattttacat cagggacagg tccgtgcaac tggaaatttg
     3781 gaggagctac aaagcgcatt tggtatggat ggtgcaagtc tgaatgaaat ttatctggcc
     3841 ttgacgcaag aaggagtggc tggatgaaag aattgtttca acaacgccga ctagattttt
     3901 taaatcgttg ttccaagtat ctgcgctatg ttctgaatga ccattttgtt ttggttctca
     3961 tggttttatt aggctttttg agtttgcaat accgtcaatt attgttgtcg ttccctgaga
     4021 atccgttgcc gattgttttt gtggttattg caatcagtct actggtacta gtgtccggaa
     4081 gaattgcgac ttatctagaa gaagctgatc aaatcttcct attgaccaag gaaaaagaca
     4141 ttctgcaagg actcgaggtt gcagccagat gcacggtctt gttttggtcc tctatacagg
     4201 tggtggttca gcttgttttg ttaccaatct atttgaaact gggtttaccg gtgtggatga
     4261 ttgtagctgg tcttcttact ttgttggttt taaaatgtct ttttgtcaag cgccaattag
     4321 tggcttatca gtcacaggga gtattggact ggtctaaggc tattcaagat gaacaaaaaa
     4381 ggaaacagtc tattttacgt ttctttgcct tatttacgac ggttaaagga atcagtacga
     4441 ctgttaaacc gagaagctat ctcaatggaa tcttgcgtct cgtcaagtcg agacagactt
     4501 ggttttatct ctacttacgg gctttcttgc gttcaggaga ctacttgggc ttgacgatac
     4561 gtctactgtt gttggcgatt ttgtccctat ttgccattga agaatcgtgg ttatccatcg
     4621 gcctagtttt agtctttcat tatttgcttg tctttcagtt gttggggctt tacaagcatt
     4681 atgattatca atatataaca caactgtatc ctctggagaa agattccaag aaaattggtc
     4741 ttcagaattt gcttagagtg attttatata gtctattact ggtggaattg ggctttgctc
     4801 tgctattttc taaagagaat acgatggtag tcgtcttact tctcgtgggg attttcttgc
     4861 atgaaatata tttgcctcta aaattaaaaa aattgattga ctaaatagac gaaaattagt
     4921 aaaatagtaa ggaattttta aaggaggaaa ggcatgcagt ttgataccag tgggctacaa
     4981 ttacagtcta ttgcaggaaa tagtggcaaa gcgtttaaag gcctacggtc agacggaacg
     5041 ccagtctttg tgaagtatga gatgcctccg atagtgtctg ctcttgcgcg tgagcaaatt
     5101 acaccacccg ttttgtcagc aaatcgtgaa gtaggaatgg ggcatcgtgt agagcaggag
     5161 tggttgaatg gtcgtacctt ggagcgtcaa gatatgacta gtaaacagat tcgtcaaata
     5221 ctggtgagaa tgcactattc tcgcattttg ctcaatcagg ctttgcagat gaattatacc
     5281 tatatggaac ctcaggattt ggtttatcgt tggcaagaag aggcgccaac tagattggga
     5341 cagaattctt atctgcaatc tatctgtcaa gatttattga ataatctacc aagattccgt
     5401 caagaggtgg caacatttgt tcacggagat ttgcatcata gtaactgggt agaaacgacg
     5461 tctggtttgg tgtatttgac agattgggag accgcttgtg taacggatcg gatgttggat
     5521 gttgcctata ttttgacgca ttatattcct cgtcagtcct gggaagagtg gcttcgggct
     5581 tatggctaca aatataacag cacagtatta aataaggttt attggtatgg ccagcttggc
     5641 tatctaaacc aaatagctaa gcatgtagaa agctacaatg ttttggctgc aaataaagaa
     5701 atttatgctc tacggcaatt ccgtcagagt ttctataagg aagtatgaga gttagaaatc
     5761 gtaagggagc gagtgagctt ctagcaaaca atccccagta tgttatctcc aatccagagg
     5821 agtgtaaggg gaaatgggca gagatttttg gaaacaataa tcctatccac atagaagttg
     5881 gttctggtaa aggtcgcttt gtcactggta tggctgcgca aaatccagat attaactata
     5941 ttggtattga tattcagatg accgtgttaa gctatgcctt ggatcgtgtg cttgaagctg
     6001 gcttaccaaa tataaaatta ttgcaggtgg atggttcgag tttgaccaac tattttgcac
     6061 cggcagaaat agatcagctt tatctgaatt tttcagatcc atggcctaag aaacgtcatg
     6121 agaaacgccg tttgacctac aagtcattct tggataccta caaggaaatc ctacctgaga
     6181 agggagaaat ccacttcaaa acagataatc gtggtctgtt tgagtatagc ctggctagtt
     6241 tttctcaata tggcatggtc ttgaagcaag tttggctaga tttgcatgct gatggtttgg
     6301 aaggcaacgt tatgacagag tatgaggaga aattctcaaa caagggtcaa gttatctatc
     6361 gtgtggaagc acagtttcaa taattccctt agtggaaaat gaggagaggt ctaacagaga
     6421 cctttttcct ttacaaatag ggatagatat gatagaataa tggaagtgaa taatgagaaa
     6481 aggggttggc gtcagtcaac cctttccctg tacacggatt tctgtatata gaatgaatga
     6541 tagtacaagg gagtttactg tcaaaggaaa tagagagtcc tggatagtgc gaactatttg
     6601 agtaatgtat ttctagcgac tgtaaaaata ggaggtgttt atgtcatcaa ttattgaatt
     6661 ggtcacagca gcaattaccc ccgctattca aactccttac gagttggtag atgtggaata
     6721 tggtaaaatg ggcggtgact atgtcctatc gatttttgtc gataaggagg gtggaatttc
     6781 ccttcaagat acggcagatt tatccgaaaa gatcagtccg attttggaca ctatcaaacc
     6841 agacccattt ccagaccaat acatgctgga ggtaacaagt ccaggtttgg aacgtccttt
     6901 aaaaacggca gatgctgttg agaaggcggt tggaaagtac atccatgtca agctctatca
     6961 ggcaattgat aaaatcaagg tttttgaagg aacgttgctc tcctttgatg gaacagacct
     7021 gattatggag tatatggata aaactcgtaa gaaggaagtg actattcctt accagacggt
     7081 ggctaaggcc cgtttggctg ttaagttata atgctctttc atgagtattt taaaagatat
     7141 tagactttaa gaaaggacct tttgagcgca aaaggaaaac aacatgagta aagaaatgct
     7201 agaagccttc cgtattttag aggaagacat gggtattaac aaagcggata tcattgatgc
     7261 agttacagag tcgcttcgtt cagcttataa acgccgttat ggtcaatcag aatcagcagt
     7321 gattgaattt gacgagaaaa aaggcgattt ccatgtattt actgttcgtg aagtagtaga
     7381 tgaagtattt gatagccgac tagaaattag tctaaaagat gccttggcta tttcatcagc
     7441 ttatgaaatg ggtgacaaaa ttaaattcca agaagaccca gcggaatttg gacgtgtagc
     7501 tgctcaatca gctaaacaga ccatcatgga aaagatgcgc aaacaaaagc gtgccattac
     7561 cttcaatacc tacaagcaac atgaaaatga gattatgtca ggtacggtag agcgttttga
     7621 taatcgcttt atctatgtca accttggtac gattgaagca caattgtcaa aacaagacca
     7681 aattcctggt gaggttttcc aatctcatga tcgcatcgaa gtctatgtct acaaggtaga
     7741 agacaatggt cgtggtgtta acgtatttgt cagccgtagc catccagaaa tgatcaaacg
     7801 tcttatggaa caggaaattc cagaagtata cgatggaaca gttgaaatca tgagtgttgc
     7861 ccgtgaagct ggagatcgta cgaaagtggc tgttcgtagc cataatccaa acgtagatgc
     7921 catcggtacg atcgttggtc gtggtggttc aaatatcaag aaaatcacca gcaagttcca
     7981 cccagctcgt tatgatgcta agaatgaccg tatgattcct actgaggaaa atattgacgt
     8041 tatcgagtgg gtagcagatg aagcggaatt tatctacaat gctctcgctc ctgccgaagt
     8101 tgaccaagta ttgtttgaca cggaagatgg aaaacatgct acagtcgttg taccagatga
     8161 taaattgtca ttggcaattg gtcgtcgcgg tcaaaacgtt cgtttggcag cacatttgac
     8221 aggattccgt atcgacatca agtcagcatc ggagtatgaa gcttttgaag caactcaata
     8281 tgcaacagac gaagttgtag aagaagtcgc agaagaacaa gaataaggca aaaggagcaa
     8341 ccatggcaaa agctagaaaa atacccttgc gcaagtctgt ggtgtccggt gaaatcatcg
     8401 acaaacggga tttgctccgt attgtaaaaa ataaagaagg tcaagtattt atcgatccaa
     8461 caggcaaggc aaatggtcgt ggagcttata tcaagcttga caatgatgag gcaagccaag
     8521 ctaagaaacg tcgtgtcttc gatcgttcct ttagtatgga agtggccgaa gaattttacg
     8581 atgaattaat tgcctatgtt gatcataaga tcaagaggag agaacttgga ctcgaataag
     8641 agacagaaaa tcttaaattt attaggtttg gcccagcgag ctggtcgcct ggtttcgggt
     8701 gaggacctgg ttgttgaagc tattcaaaaa gggcaggcaa agttggtgtt tttagccgaa
     8761 gatgctgctg gaaatttaag taaaaaagta acagataaaa gtcataccta tcaagtagaa
     8821 gttgtaacag tgttttcaac actggaattg agtgcagctg tcggcaaggc tagaaaagtt
     8881 cttgcagtga cagacgctgg atttacaaag aagatgaggt ctattatgga atagaacagg
     8941 aggacaaggc attgtctaag aagagattga atgaaatagc ccgtgaatta ggcgtaagca
     9001 gtaaggaagt tgttgctaag gctcaagaat tgggttttga agttaaaagt catgcttcaa
     9061 gcgtagatga agcaagtgct aaacgccttg cagaaagctt tgggggacaa aaatcagagg
     9121 caactaaagt tgcggcaaaa gttagccagc ctgaaaaggt tgatgaaact ccaaaagtgg
     9181 aaacagctaa ggtagaaaaa gctaaggaaa cacagccagt agtaaaagaa gaagttgcgg
     9241 caagtacagt acaatcagct ccacatcgtc cacaaagtcg aaactttaag gcagaacgtg
     9301 aggcgcgtgc caaagagcag gctgctaagc gagctcaggg tcaaggaaaa ggtggtcaag
     9361 ctaaatctgg tcaggaccgt cgtgacaacc gtcaacaagg tcagggacgt tcaaacaatg
     9421 agcgaaatga tcgccgcgat aatagacgtg aacagggttc agataaacga aaggacaatc
     9481 gttttgggga ccgtcgcgat aatcgtgata accgttcagg tcagtcagct cgctttgaac
     9541 aaagagcggc tgcaaaacca gcaggaccta aaattgactt caaagcgcgt gctgctgctt
     9601 tgaaagcaga acaaaatgcg gagtatgctc gtaccagtga agaacgtttt cgtcaggctc
     9661 aggaagctaa aaagcaacct aagaagccaa aagaaattaa gtttgaagaa ccggttgtgg
     9721 aaagcaaacc atttgtgaag cctgcacctg ttgcatcggt accagagcaa gttgcagaaa
     9781 ctactgtaga tacccgtcgt aagaaacaag ctcgaccaga taaaaaacgt gactttaatg
     9841 gtgacgaaga agatggtcca cggaaacaac aaagaaatcg aaatagtcaa aatcaagtga
     9901 gaaatcaaag aacaagtaac tggaataaca ataagaaaaa taaaaaaggc aaggcaaacc
     9961 aacctgccaa acctgtcaca gaacgcaagt tccacgaatt gccaactgaa tttgaatata
    10021 ctgctggcat gaccgtcgca gaaattgcaa aacggatcaa acgtgaacct gctgaaattg
    10081 tgaaaaaact cttccttatg ggagttatgg cgactcaaaa ccaatctttg gatggagata
    10141 ctatcgaact cctcatggtt gattatggta ttgaagcgaa agaaaaggta gaggtcgata
    10201 gcgcagatat tgagcgtttc ttcgtagaag agggttacct caatgaagaa gagatgacag
    10261 aacgcccacc tgttgtgact atcatgggac acgttgacca tggtaaaaca accttgttgg
    10321 ataccctacg taattctcgt gttgctactg gggaagctgg tggtatcaca cagcatatcg
    10381 gtgcctacca aattgaggaa gctggtaaga aaattacctt cttggatact ccaggacacg
    10441 cggcctttac ttctatgcgt gcccgtggtg catctgttac cgatttgacc atcctagtcg
    10501 ttgcagcaga tgatggtgtc atgccacaaa cgattgaggc tatcaaccac tcaaaagcag
    10561 ctaatgtgcc gatcattgta gctatcaaca agattgacaa gccaggtgca aacccagagc
    10621 gtgtcatcgg tgaattggct gagcacggtg ttatctcaac cgcttggggt ggagaatctg
    10681 aatttgtaga aatctcagct aagtttaacc aaaacattga tgaattgttg gaaactgttc
    10741 ttttggtcgc tgaaatccaa gaactgaagg cagacccaac tgttcgtgca attggtacag
    10801 ttatcgaagc gcatttggat aaagggaaag gtgcggttgc aaccctcctc gttcaacaag
    10861 ggacacttaa tgttcaagac ccaatcgttg tcggaaatac cttcggacgt gttcgggcca
    10921 tgacaaacga ccttggtcgt cgtgttaaaa ctgctggtcc atctacaccg atatctatta
    10981 ctggtttgaa cgaagcgcct atggcaggcg atcattttgc agtttacgag gatgagaaat
    11041 cagctcgtgc agcaggtgaa gaacgtgcta aacgtgctct tcttaaacag cgtcaagcaa
    11101 cgcaacgagt tagtcttgaa aacctctttg atacccttaa agcaggtgag gttaagtcag
    11161 ttaatgtgat tatcaaggcc gacgtacaag gttctgttga agctcttgca tcatcgcttc
    11221 aaaagattga agtcgaggga gtacgtgtca atatcgtcca ctctgcagtt ggtgctatca
    11281 atgaatcaga tattactctt gcggaagctt caaatgctct tgtgattggt ttcaacgttc
    11341 gtccaacagc tgaagcgcgt agccaagctg aagcagatga tgttgaagta cgtcttcaca
    11401 gcatcattta caaggttatc gaagagatgg aagatgccat gaaaggtatg cttgatccag
    11461 aatatgaaga aaaaatcatt ggtgaggcaa tcattcgtga aaccttcaag gtatccaaag
    11521 ttggaacgat cggtggtttc atggtcgtac gtggtaaggt tacccgtgat tcaagtgttc
    11581 gagttatccg tgatggtgtt gtagtatttg atggtaaact agttagtttg aaacgctata
    11641 aagatgacgt gaaagaagtt ggtaatgccc aagagggtgg tttgatgatt gagaactaca
    11701 acgacttgaa agttgatgat accattgaag cttacatcat ggaagaaatc aaaaaataat
    11761 attttctcat tgtcaaaatc atagacaagt gattttgtcg aggaagtgat aatttaatag
    11821 attttagtag attttaaagc aatagttttt aatctacttg gattattcaa gctggggaaa
    11881 ctcagctttt ctatcatcta agaaaggaaa gaatatggcg aatcattttc gtacagaccg
    11941 tgtcgggatg gaaatcaagc gcgaagtcaa tgagatttta caaaagaaag ttcgtgatcc
    12001 acgtgtgcag ggagtgacca ttacagatgt tcagatggtc ggcgatttgt caatggccaa
    12061 ggtttactac acaatcatga gtaatttggc atccgataat caaaaagcac aaacgggtct
    12121 tgaaaaagcg acggggacca ttaagagaga acttggtcgt aagttaactc tttataaaat
    12181 tccggattta gtctttgaaa aagaccaatc aattgagtac ggcaataaaa ttgaccaaat
    12241 gttgcgtgct cttgatcaga aagattaaca acaaaagtcg gatggaaaca ttcggctttt
    12301 tctggctcgg atgctttgtt catatatggt ggcgtttaca agctctcgga aagatgttat
    12361 actaatactc aatgaaaatc aaaagtagac taggaaacga agtcgaagat agaactctgt
    12421 tactatctta tttcaaggta acaggctgaa aacctccact ggagcttttc actcatcaag
    12481 gcaagttgac aacggataat tttgattttc gaagagtata agaccaaaga tagagcacag
    12541 gaggaagtta tgaaaacatt tattagtaaa ctgatgttag tgtccacggt tgtactatta
    12601 gctgcttgtc agtctaatca ggtaaaaggt ggtgagagtt ctagtgcttc aagccaagtt
    12661 tcagatggtt ctagtttgca gcaagcgtca acaatagcat ctagctctga gacgcaagca
    12721 tcctctgtga ccactcctga gctaagtgaa gtataccaat cagttattga tcgttatcaa
    12781 gcgaatatgg ggcagcctgc tgaggcaatt aatcaggatg aggtcagtag ctatctgagc
    12841 ttattaacta gccaggggca agaatacagt ggaatatttt atagtttgta tgatgtcaac
    12901 catgatggta cagaggagct gcttctagct ttggacaagt cgggagaata tgtcttaatt
    12961 gacctctata ctcagcttac cgatgagagt ctacgtttgg tggataattt ccgcaatctt
    13021 ggatttgaaa ttggaccgga cgccctactt cgtcctttac aggatggaac atacttattt
    13081 gaaggagatg gtatttttcg catttatcaa tacaatgcga tgattccagg tttaaaacgg
    13141 atttctgaat cagataccaa tcctgaaact tctcccttgc ttgagttgaa aagcttgcat
    13201 tgggttaagc tatagatttt attaatgatt attcctaggc tggatttccc ggccttttgt
    13261 agttcctaag aactttaagt tttcttttgg caatctttaa tctttctttt aggaaggaaa
    13321 ggtaaactag gagcatatca ggaagggata cgacttccta aagaaagaaa aggaatctac
    13381 attatgaaaa caaatcttaa aaaattactt tactctggtg ttactcttat gagccttggg
    13441 gtcttagcag catgttcatc tacttcaagt tcaacgacta cttcaagctc agcagcaact
    13501 agtcagacaa gtgtagcgac aacttcaaat aatagcactt catcagattc aaactcgtca
    13561 actattgact ggtcagccct tccaacgaca gaagtaacac tatcaaatga tggtttaaaa
    13621 attactgagg gtggaaccta tattttgact ggttcaacaa cagctggtgt aacggttgaa
    13681 acagatgcca atgttcgcat cattctagca ggtgctgaga tttcaagttc agatactgca
    13741 gcaatcaatg ttattaatgc tgacaatgtt gaattggaaa tcaaagatgg tacgacgaat
    13801 acagtgaaag ataccagcaa tcatacagat accaatattg aaggggctat ccatgttgaa
    13861 gctgatttga ccatcactgg taatggtagc ctgaccgttg aaggcaactt ccaagacggc
    13921 atcgtatcga cagatgacct agtgatcact gctggtacaa tcaaggtaac tgcagtggat
    13981 gatggtatcc gtggtaagga ttcattgaca atcaatggtg gtacaatcaa tgtcacagca
    14041 ggtggtgatg gtatcaagtc tacaaatgat acagatacta ccaaaggtta tacaactatc
    14101 acaggtggtg aaattactgt aaaagcaggt gatgatggta ttaaagcgga gacggctttg
    14161 acaattgacg gaggtaccat tacagtatca gaatcagtag aagccttgga aggaactaat
    14221 atcactatca acggtggtac aattgatgtc tatggttcag atgatgctat taatgcggca
    14281 agtacaacgt catcagaaat cttcatcaag gtaactggcg gtgacttgaa agtagctgta
    14341 ggtagtggag atacggatgc ctttgatgcc aacggtgata tctacatttc tgggggtact
    14401 attgctgtaa cagcaccaac atcagcattc gactttgatg gtacagcaga attgacagga
    14461 ggtactgtga cagttaacgg tgagcagatt actcaaatca cggcgacagg acctggcggt
    14521 cgcggtggct ggtaatcaat aataataata caaaaaggtc tgtgttgacg aactcagacc
    14581 tttcgtttgc tttccatgtt gggaagattg attttgtatt taattaccaa tagtcgaatg
    14641 attaaagaaa tggtaaaaat agtgatgaaa gttggaattt gtggtaattt ccaatttaca
    14701 acgcaaagat gatagaggac tcctgagaaa aatgcaagga cagcatagac atcttcttta
    14761 agaacaatgg gtgtttcatt gacgagtaaa tcacgggcga ttccgcctcc gacacctgtt
    14821 aaagctgcca gaataccact ggttagagcg tttagctgga gagagatgcc agtactggct
    14881 ccaatgaggg cgaagatggc tagaccgatt gcatcaaaga taaggtttgt ctgggaaagg
    14941 aaatgaatca tcttcttacc aggtggtttg tcctgcttta gattgataac aatcaagtac
    15001 atgctaatcg ctactccgag agataaatag atggctgtag gatcagtcaa ggcggcagga
    15061 atgcgattgg ccattgtatc tcgaataatt cccccaccaa cggcggtaat gataccgagc
    15121 aagctaattc caaaaatatc taactttttc ttaaatcctt ttacggcccc cgaaacagca
    15181 aatgcaatag tgcctatgta gttacaaatc ataagaaata aatcgaattc cataagaacc
    15241 tccgtaccta tattaacaga aagaaagacg gcgtgcaagc ttatttaaag tttgtgaaaa
    15301 aagtttcaaa caagtaaagt gaatcttttg aggatttgtg aaaaaacgca ctaaatcaag
    15361 gttttcacga aaatttctgt aaaaagaaaa cggttcaatt acttgccatt tgtgaaatat
    15421 tggtctatca tagtacagaa agagaaaaac ctttggagga aattatggta tctatctcaa
    15481 aagaacaaca tttggatatg ttcctaaaaa tgcaacaaat ccgtgatgtt gatatgaaat
    15541 taaacaaatt agtgcgtcgc ggtttcgtac aaggtatgac tcacttctca gtcggtgaag
    15601 aagctgcggc tgttggacct attgctggat tgacagatga ggacatcatc ttctcacacc
    15661 accgtggtca cggtcacgtt attgcaaaag gtattgatat caacggtatg atggctgaac
    15721 ttgctggtaa ggcaactggt acatcaaaag gccgtggtgg ttctatgcac ttggccaacg
    15781 ttgaaaaagg aaactttggt tcaaacggta tcgtaggtgg tggttatgcc cttgcagtgg
    15841 gtgcggccct tacgcaacaa tacctcggta cagataacat tgttattgcc ttctcaggtg
    15901 attcggctac taacgaaggt tccttccacg aatcaatgaa cttggcagct gtttggaatt
    15961 tgccagttat cttcttcatt acaaacaacc gttacggtat ctcaactgat atttcttatt
    16021 ctactaagat tcctcacctc taccaacgtg cagcagcata cggtattcca ggtcattatg
    16081 ttgaggatgg taacgacgtt attgccgttt atgaaaaaat gcaagaagtc atcgagtacg
    16141 ttcgtgcagg aaatggtcct gccatggtcg aagttgaatc ataccgctgg tttggacact
    16201 caactgccga tgcaggtgtt taccgtacta aagaagaagt caatgagtgg aaagcaaaag
    16261 acccacttaa gaaataccgc aaatacttga cagagaacaa gattgcgaca gacgaagaat
    16321 tggatgctat tgaagcacaa gtggcagaac aagtagaagc atctgtgaaa ttcgcacaag
    16381 aaagcccaga tccagacatc tcagtagctt atgaggatgt gtttgtagac tagggtgtga
    16441 ggacgttaaa gaggcacaga aaaattaggg agtcagctag tgatgcggac atcactaatg
    16501 gctcatctat ttttccaagc ctctagtctg aacccaacta ttaacgtaag aagtttgact
    16561 aagctttaaa gaagcaagtc aaactagggt agttcgagta gctatgacgc ttgattacaa
    16621 tgaagtaatt gattagtttt ctatatttta cttgttacag taaagataaa ttgatataaa
    16681 ttaggagtaa aaaatggctg aaacaaaagt aatggccttg cgtgaagcga ttaacttggc
    16741 tcaaagcgaa gaaatgcgta aggatgaaaa agtattcttg atgggggaag acgtcggtat
    16801 ctacggcggt gacttcggta catctgttgg tatgttggac gaatttggtc caaaacgcgt
    16861 tcgcgacacg cctatctctg aggcagcaat cgctggttct gcggttggtg cggctcaaac
    16921 aggtcttcgt ccaatcgttg acttgacctt catggacttc gtaacaattg cccttgacgc
    16981 gattgttaac caggctgcca aaactaacta catgtttggt ggtggtttga agacacctgt
    17041 aaccttccgt gtagcatcag gttctggtat cggttctgct gcccagcact cacaatctct
    17101 tgaggcatgg ttgactcaca tcccaggtat caaggttgtc gcacctggta cagctaacga
    17161 tgcaaaaggt cttttgaaat catctatcct tgacaacaac ccagttatct tcttggagcc
    17221 aaaagctctt tacggtaaaa aagaagaagt taacttggac ccagatttct acattccact
    17281 tggtaaaggt gaaatcaaac gtgaaggtac tgatgtaacc attatttcat acggtcgtat
    17341 gttggaacgt gccttgaaag ctgctgaaga agtggctgct gaaggtatca gcgtagaagt
    17401 ggttgaccca cgtaccctta tcccattgga taaagaattg atcatcgaat ctgtgaagaa
    17461 aactggtaag gttatcttgg tcaacgatgc ttacaaaaca ggtggtttca tcggtgaaat
    17521 cgcatcgatc atcacagaaa gcgaagcctt tgactacttg gatgcaccaa tcatccgtat
    17581 cgcttcagac gatgtaccag ttccttacgc aaacattctt gaaaacgcag tattgccaaa
    17641 cgtagagaaa atcaaagcgg caatctacaa gcaagtaaac aagggttaat cttatcgtta
    17701 tccgcttatc ttttctggct gtgttgattt ggcttgccta acgtcagtta tgcctgcacc
    17761 aaattgcctt atcagaaaag caatcggaaa gacgataacc ctaatgggag tgggaaagaa
    17821 ctcgaccaag ataaaaagag ttcgtcttcc cgcccccgca cagttgatta ggccagattt
    17881 ggagtgcaaa acacgaacaa atctgccaat caaccactgc gctgagatgt tgacacgaac
    17941 tttgagtagt ggttctgggc tttttgccca gcctcgacta agaatgcttg gaaaagaatt
    18001 gagccgcttc gattatcgaa gtctggtttg gttcttgaca aggtaagaaa ctgaaagaaa
    18061 ggaattgaac ccgtccggaa aactcggaaa agagataaat cgtatcgaaa atcaggattt
    18121 tctatttttc aatcgttttc tgttcggact tggtatctta ataatggcta ttgaaatcat
    18181 tatgcctaag ctcggtgtgg acatgcaaga aggtgaaatc atcgagtgga aaaaacaaga
    18241 gggcgatttc gtcaacgaag gtgacgtcat cttggaaatg atgtctgaca agaccagcat
    18301 ggagctggaa gcagaagagt caggcgtcct attgaaaatt gttcacggaa acggtgctac
    18361 cgttcctgta acagaagtta ttgcctacat cggtgctgaa ggtgaaacgg ttgaagccgg
    18421 cgcttcatct gctcctgctg ttgaaccagc agcggctatt gaagaagtac ctgcgggtcg
    18481 tacaccagta atcgttgctc ctgcaactgc tgccaaacca caaggtagtg gcaaggtgcg
    18541 tgcaacgcca gctgcgcgta aattggcgcg tgagcttgga atcgacttgg gtcttgttcc
    18601 aggaacaggt gctaacggtc gtgtccacaa ggttgacgtc gaagacttca agggagcagc
    18661 tccaaaagca actccgcttg cagcccgtat tgcagcagac caaggtgttg acttgtcaac
    18721 ccttacaggt tcaggtgtca acggtaagat tgtcaagaac gacgttcttg cagtacttgc
    18781 tcctgtagct gtagaaactg ctgctccagt accaaaagca gaagaaaaac cagctaaaga
    18841 attgccagaa ggcgttgaaa tcatcaagat gagcccaatg cgtaaggcga tttcaaaagg
    18901 tatggtcaac tcttacttga ctgctccgac atttacactt aactacgata ttgacatgac
    18961 caacctcatg gcacttcgta agcaagtcct tgagccaatc atgaacaaga ctggtttgaa
    19021 agtaaccttt acagacttga tcggtcttgc ggttgttcgt actttgatga aagaagaaca
    19081 ccgttacatg aacgcatctt tgattaacga tgcacaagaa atcgaattac acaagttcgt
    19141 caaccttggt atcgcagtgg gtctagatga tggcttggtg gttccagttg ttcacggcgc
    19201 agataagatg agcttgtctg actttgtggt ggcttcgaaa gatgtcatca agaaggctca
    19261 atctggtaag ttgaaggggg ctgaaatgtc aggttcgacc ttctctatca ccaacttggg
    19321 tatgtttggt actaaaacct ttaacccaat catcaaccaa ccaaactcag caatccttgg
    19381 tgtagcatca actgttcaaa caccagttgt tattgacggc gaaatcaaga tccgtccaat
    19441 catggcactc tgcttaacca tcgaccaccg tatcattgat ggtatgaatg gtgctaagtt
    19501 catggttgac ttgaagaact tgctggaaaa cccattggaa ttgttgatct gagataagat
    19561 gcaaaaggcg ttaagaaaaa cgtatgaaaa taggaaatca acgatgtgcc ttgaggcacg
    19621 aggcgattta tctttttcaa taggttttta gcctgtgctc aatttggtaa agagaaaaaa
    19681 taaagaaagg gaataagagc gagagagttt tagcaattga acccgagcgg aaagctcgga
    19741 aaaaagataa atcgtttaga aaatcaggat tttctacgat ttcctatttt tcagtcgctt
    19801 tctcttcgct cttggtatca taactatggc aattgaaatt attatgccga aacttggtgt
    19861 agatatgcaa gaaggcgaaa tcatcgagtg gaaaaaacaa gagggtgatt ttgtcaacga
    19921 aggtgatgtt atcttggaga tgatgtcaga caagacaagt atggaattgg aagcagaaga
    19981 atcaggtgta ctcttgaaaa tcgttcatgg taacggtgca actgttcctg taacagaagt
    20041 cattgcttac cttggtgcag aaggcgaatc agttgaagtt ggtagcgcac ctgctccagc
    20101 tgaggttgca caagcaactg ccgacttgaa agcagctggt ttggaagtgc ctgcagctcc
    20161 tgcagcagct ccacaagctc ctaaggctga attggcagct gacgagtacg acatggttgt
    20221 tgtcggtggt ggtcctgctg gttactacgc agctattcgt ggtgctcaat tgggcggtaa
    20281 aatcgctatc gttgagaaat cagaatttgg tggtacctgc ttgaacaagg gttgtatccc
    20341 aactaagacc taccttaaaa acgctgaaat tcttgacggc ttgaagattg ctgctgagcg
    20401 tggtatcaac cttgcttcaa caaattacac cgttgatatg gacaagacag ttgacttcaa
    20461 gaacaaggtt gtgaagacat tgactggtgg cgttcaaggt ctcttgaaag ctaacaaggt
    20521 aacaatcttc aacggtcttg gtcaagtaaa tcctgacaag actgttgtca tcggcgacaa
    20581 ggtcatcaaa ggtcgtagca tcattcttgc aactggttct aaggtttctc gtatcaacat
    20641 cccaggtatt gattctaaat tggtgttaac ttctgatgat atccttgact tgcgtgaaat
    20701 tcctaagtca ctcactgtta tgggtggtgg cgtagtcggt gtggaacttg gtttggttta
    20761 cgcgtcttac ggtactgaag taacagttgt tgaaatggct gaccgtatca ttccaggtat
    20821 ggaccgcgaa gtgtctgttg aattgcaaaa agtcctttct aagaaaggca tgaaattctt
    20881 gacatcagtt ggagtatctg aaattgttga agccaacaat caattgacaa ttaaattgaa
    20941 cgatggttca gaaattatct ctgaaaaagc tcttctttca attggacgtg tacctcaatt
    21001 agctggtctt gaaaatcttc accttgagtt ggatcgcggt cgtatcaagg ttaatgctta
    21061 ccaagaaact tctatcccag gaatttatgc acctggtgat gtcaacggta ctaagatgtt
    21121 ggcacacgct gcttaccgta tgggtgaagt ggcagctgaa aatgctattc acggtaacca
    21181 ccacaaggct aaattggact tcacaccagc agcggtttac acacacccag aaattgctat
    21241 ggttggtttg actgaagatc aggctatcga gaaatatggt aaagaaaaca tccttatcgg
    21301 tcgcaacagc tttactggta acggtcgtgc tattgcttct aacgaagcac atggtttcgt
    21361 aaaagttatc gctgagaaga aatatcacga aatccttggt gttcacatca tcggtccagt
    21421 tgcagctgaa atgattaacg aagcagcaac tatcatggaa tctgagttga cagttgatga
    21481 cgtggcagca tcaatccacg gtcacccaac cttctctgaa gttatgtacg aagccttcct
    21541 tgatgttctt ggtgttgcga ttcacaaccc accaaaacgg aaataatcag ataagcaaaa
    21601 agaaagtcca tgtggctttc tttttttgat gttcatagga tagtatcaat ctttcgcagt
    21661 ttttgactgt tatttgatag aaaaacagac tatacttgta gtagaaaaag gcaaggagaa
    21721 taaagatgcg caagattatt tttttagatg tagacggaac cttggttgac tatcataatc
    21781 ggattccaga atcagctatt cgtgctattc gacaagctcg cgaaaatggg cacttggtct
    21841 atgtctgtac tggtcgcagt cgagcagaaa tgcagccaga attgtgggag attggtcttg
    21901 acggaatgat tggtggcaac ggctcttatg tcgagcatca agatcaggtc atcatgcacc
    21961 agctcctatc agaagaggat agcagagcga ttgtggattg gctccatgaa cgcggcttgg
    22021 aattttatct ggagagcaac aatggcctct ttgccagtga gaatttccgt gaacgtgccc
    22081 gtgaaaccct gcggatttat tccatgaata aaggaaaaac agcagaagaa gtggccgatc
    22141 aggaagtaga agacgttata cacggcatga tttttgatgg tcaactctac cgcaatgacc
    22201 tcaacaaagt cagttttgtg ctcgattcct accaggacca cttggattcc aagcaagcct
    22261 ttccgcaact ggtcgcaaac acctggggag gtcgcggaga gtcagctctc tttggtgact
    22321 tgggggtgaa agacatcgac aaggcccatg tcatttctgt attgctagac tatttgggtg
    22381 ctagtcaggc agacactatc gcctttggtg acgctaaaat tgatatttcc atgctggact
    22441 attgtgcggt tggggtcgct atgggcaatg gcggagcgga aatcttggct atggcagata
    22501 tgataacgga cgatgtagaa gaagacggcc tctacaatgc ctttgaaaga ttgggactac
    22561 ttgacaagta gctctcagaa taaatcatag tatcccttgc aaaaccgctt acaatctgat
    22621 aagataagag taggattgtt actgataagc aggcaaaacc taagtggata gtgaaggggc
    22681 tggcaacagt cgtatttgct atatgcttgg gttctttttt atcagtcgag taaataggcg
    22741 gtaaagtaga tgcagattga aaaagtttat aacaacaatg tcattcaagc aatagatcag
    22801 cagggccgtg agttgattgt catggggaaa ggattaggtt ttcagaaaaa agcaggggaa
    22861 gaattagaca ccagcaaaat cgagaaaacc tttgtgctac aaaatgacta ccaacaatca
    22921 gatttatcga gtctgtacct gcaaatggag agcggtgaag tcgaagtagt caatgccatt
    22981 atcaataggg cagaagaaac tttagaagtt cagtttgatt tgtctttgta tctagcctta
    23041 gcagaccatt tacattttgt atttcagcga tgccgtgaag gtatctttat tgagaacccg
    23101 ctgtcttggg aagtacgtaa gttttatccg aaggaatacc aaattggttt agaagccttg
    23161 cagttggtgc aggagcgttt aggcttggaa ctaggaaagg gagaggcctc gtctatcgct
    23221 ctccatctgg taaatgctca gaagaatggt gcttttggca aggaaaccca aacaattagt
    23281 aaaatcgtga ctcagatttt agacattgtc cgccttcatt ttggtagtgt gacctacgag
    23341 gaggatacca gctatcatcg atttgtaaca catattcagt attttgctca acgtgtggcc
    23401 aatggggttg ttgaaggcca attatccaga ttccttcgcc tgtacaacaa aaattcgcca
    23461 gcatattgcg gaagtttacc attttgaaat gtccaaagat gaacaagtct atttaaccat
    23521 tcatattcaa cgtttaaaaa ctagttaaaa aattaaaaaa gaaaaaaacg gaaaacgctt
    23581 gcaatttaat ttgcgatgtg ttatcataat ctcaacaaaa ggattgttac tggttagcag
    23641 gcaaaaccta aatatataca agatactctt tttggcttgg gccaagaggt agtgtttggt
    23701 atatgtttag gtttttctgt ttttccagaa aagaaaggag ccggaaaatg gcaaaggatt
    23761 atacagattt agctacagat attgtagctc atgttggtgg aaaagaaaac atcagcagtt
    23821 tgaaacactg cgtgactcgt cttcgttttg gtctcaagga tgagagcaag gctgatacag
    23881 actacttgaa ggcgcgtgat ggcgttgtga cagtagttca agcaggtggt caataccaag
    23941 tggttatcgg gaaccatgta ccagacgttt atgtggctgt gcaaaaagtt gcagggattt
    24001 caggagatgg cgccttggat attgatgaag gtgacggacc gaagggaaat ctatttgacc
    24061 gatttgttga cctagtttca ggtgttttcc agccttcttt aggagtgctt gcagctgcag
    24121 ggattatcaa aggattggta tccatcctag ccgctacaat gggtttgaac aatgataata
    24181 gcgccctata tgctatttta aacacagctg gagatggatt cttccaattc ttgccaatcg
    24241 tcttagcttt caatgctgca cgaaaattca gaatgaatga atttactggt atggcaattg
    24301 ctatggcatt ggtttaccca actctgccag ggacatttgc gactctaaaa gaagcgggtc
    24361 taaataatgt ttttggcata ccatttgtac ttccagcagc aggtagctac ttgcaaactg
    24421 tgatgcctgt cctacttgct gtctggattg cttctcatat tgagaaattc atgaagaaaa
    24481 ttacgcttga cgtagttaag gtcttcattg taccgtttgt gacaattcta atttcagttc
    24541 cattgacatt cttggttgta ggtcctgtcg cgaactacgc ttcagatctt ttgtctgcag
    24601 gctttactgc ggttatgggc tttagtccac tactttatgg tattctactt ggtgctttat
    24661 ggcaagtaat ggttatgttc ggacttcact gggccttggt accacttgca atacttcagt
    24721 tttctcaaaa cggatggtca aatattttgt tagctgcagc gcttccaaac tttactcaaa
    24781 ctggtgttct tttggcaatt atgatgaaaa ccaaagaatc aaaagtgaag tcagttgcga
    24841 tgcctgcttt tatctcttct atatttggtg tcactgagcc agcaatctat ggtgttactc
    24901 ttcctatgaa aacaccattc tacatttctt gtgcagtgtc agcagtaatt ggtgcaggtc
    24961 tctcattctt tgatttgaaa aactatgcta tgggtgctct cggtattttt atgtatccag
    25021 gttatgttag tcctgaacta ggtgtgactc caatgtggat tatgatgggc ttctctttgg
    25081 cggcaatcgt cgcatccttc gctatccaaa tggcgcttcc agttccttac ttatatggag
    25141 aaccaactga aaaaaagtcc gttgaagaaa caaaggagtc tgttccagaa ttaaaagaaa
    25201 ttaaacaaga aattattgct agtccactaa tcggtaaagt agttaaatta gaagatgttc
    25261 ctgatgcagt ctttgcttca ggtgcaatgg gtaaagggat tgctatcgat cccctagatg
    25321 gtatacttgt ttctccagct aaggctgaaa taactcttgt attcccaacc aaacatgcta
    25381 ttggtcttcg tactgaaaat ggagcagagc tccttatcca tattggtatg gatacagtct
    25441 ctctagctgg taaaggcttt gaatccttcg tccaagtagg tgaccaagtt gaagcaggac
    25501 aaaaattgct ggaatttgat ctccaccaaa tcaaagcagc tgacctaccg gtcatcactc
    25561 caattatcgt gaccaataca gctgactatg aggacatctt ggtaacccaa gaaagccaaa
    25621 tcaacagtgg tgattacctg ttgacaacgg tcaaataact acattttcgt atagaaacaa
    25681 tgaaatattt ctatacaaaa caggaaaaag actatttgta tagattatcg taacaaatct
    25741 aaatagatgc taatcagaac gtactttcca cggattttgc gaatatatta gtatttattt
    25801 agattttatt ttgaagaaag tttggatata ttaatatcta gaggtgtgta aatgaaaaag
    25861 attgcttatt ttttactgag tttaagtcta tttgttgctt gtggacaaag taaggaagta
    25921 acaaatacac tgtttaagaa cgacatcacg aaaacaatca gtagtggtga ggtaaagggg
    25981 aaaaaggata gcacgaccgc tacgattgaa tggttaggaa tcccctatgc agcggaacca
    26041 gtaggtgagc tacgttggaa ggcgccacag cctgtagaaa aatgggaagg tagttttgat
    26101 gcaactgaaa tcggatctcc ttttatacaa atctcaaaag gggaagtagt cggttcagaa
    26161 ggagcgctaa atcttgatgt tgttagacct gataatacgg aggctaatct accagtgatt
    26221 gtttttctgc atggaggaaa taatcaaaca ggtcatgcac aagaaatcaa aggaaatggc
    26281 tttgtaaatg acatcaatgc cgtttatgtt tcaatcaatt atcgcttggg cgctcttggt
    26341 ttcaatccgt tggaagcact taagatagga accgatgaag aaaattctgg gaattatact
    26401 ctcttagaca ttgcggcagc attggattgg gtggaagaaa acattgaggt ctttggtggt
    26461 gataaggata atgtgaccct agcaggcttt tcagctggtg gtcgtgatgt aatggcaata
    26521 ttaatttctc cactatttaa agataaatat gataaagcaa tatcatttag tggaggaatg
    26581 actctagcag atgaaacgga tagtcaagat atttttgcaa cggcgatagc accattagtt
    26641 gttgaagatg gaatcaagtc cacagaactt gaagcaaaag aatggttgtt atctaacgat
    26701 tgtcaagtag ctgattatct ttatggactt cctgcggaga gtttgacttc gttgatggga
    26761 aatgctggta ttcgtatgtc tgtctttccg cacctgtata aagatggggt agtcattccg
    26821 aaggaaggat ttgatacttc aaattataat gatgtgcctc ttcttttaat aacaggaact
    26881 agtgaatttt ctttattcac agctttcgat ccctattttg taaattctgt gacagatggc
    26941 agtctatttt cagatgctga caaattaaaa gaatttatat ttactgaata atatggtagt
    27001 gctctgtatc gtctgtctaa cactgtagat agtgctagaa aattgcaagg aacatataaa
    27061 tcaccaatat acattggaga aatttcttat ggagataata cagagactgc tccaaaaaca
    27121 gctcagttgt tgggtgcgtt tcatggcgta tttgaacctt tacttcaaca gccatcaaac
    27181 tatgctactt tcattgtgaa gatttcaatt ctgaaggtgc taaacaacta agccaacagt
    27241 ttaaagcata tttgaaagga tttatcacaa gtagtaaccc tgaaggagaa aaattaccac
    27301 aatgggaaga gtggacagct gacggcagtc aggtaatgaa atttgatgct agtttagaaa
    27361 aagctaaaat tgaaatgggt gaagattctc aaactactga ggatattgtc gcgaaccttc
    27421 gagcagatag tactttatct gcagataaaa aacaagtttt aattgacaat gtattgaacg
    27481 gtcgttggtt tagtcaacca ttggatggtt tgaaagttaa tgaatagttt attttttgat
    27541 gtattaaaaa aatataaaag taaaaagcaa cacaaggtgt tgacaacggt caaataaaaa
    27601 ataaagtggt tggcagtgcc aatcactttt ttgaatcttg tttagcgttg aagaaaatcc
    27661 ttatctcgct caggaatgcc tgtctcatca ctctgatagc gttcagcggt gacagttagc
    27721 tggtacttac tacgtaagtc taggatctcc tgcatcattg gagaagcatg gtggatgtcc
    27781 aaagctgctt ggtctgtcca gctatcaacc aagaggattg aatgaggatc atcgagcggt
    27841 gcaaagtatt gataacgtgt atttccagcc tgctggcgaa tgcggtcggc aatgccacta
    27901 gcttccattt cctgagcgaa agcacgtgca ttgtcagctg gtccagtgta gtagaggtgc
    27961 atggtaatca tagtataaga tatagagggc gttcagcgga cacagacaaa atataggctt
    28021 ttagtttact tttagtacta ggcaatgagc tgcaggcagt actgaagtac gacaaagcga
    28081 attaacgaag taataaaaga aaaactaaat gacgtaggaa acagaacgac gacgcaagcg
    28141 tccagttctc gtttatcttt tgggcacagt ccgtagcccg tattcagttc aaccaaatac
    28201 ggaggcccta gtcctttcta ttatttatca aaattagtat aggtcctatt cttccgcaat
    28261 tgcttgcggt agctgctagg ggtggtatgg tagtattgtt tgaactggcg gttgaagttg
    28321 gacaggttat taaagccaac ttcggtcgca atttcaagca caggcttgag agtgtttgtc
    28381 aggagctcgg tagctgcccg cagtcggact tggatgataa attccataca ggaagttcct
    28441 gtttgttgct tgaagattgt cataaaatgg gtttttgtat agcccatttg ctctgctagc
    28501 tgctcgatgg tgagattttc tgcataatgt tgttggatgt gttcaatcaa caaccgcagt
    28561 ttttcatttt tccgatacat atcatcggta ttttttcgga cgatgtagcg gtagcggtag
    28621 agcaggtaga agaagtcaaa gagtcggctc ttgagaggta gctcaaagta aggcggctgg
    28681 tgtctgacca actcaaaaat ggtgagcagg cattgtctaa tctctgcgta gccagggtct
    28741 tggggctgga tgcgtagaat gcacttaaaa acatctgtct gtaagggttg caggtagagc
    28801 atactggtat gatccagttg agacgccccc agcatatcca agtgaaagag aagggtatcc
    28861 gtttcgtgcc cccgttgctc aatcggatgg atggaatgcg cagcattggg tcggatcagg
    28921 ataatatcac cagcctgact attgaaataa tcatagtcga tatggtaacg ggctgtccct
    28981 ccgtaaacat agttgatttc aaattcattg tgccaatgaa agagaatgtc aggaatgcca
    29041 tccatgacac aggtatggta atacttgtag ggtaacagac gactatcgta gtcaatggtg
    29101 tgcttaaact gtttatccgt taatggtggt tgcataggtt cctccttttc gtaggatagt
    29161 atcattatag catattattt gagaagaaaa gggtttcaaa tctgtttata ctatatttgt
    29221 tagaaaaaag ataagggaga aattagatgt cacgatttcc aaaaaatttc ctctggggag
    29281 gagctattgc agccaaccag gcagagggtg cctataatgt ggacggacgc ggtttagtcc
    29341 agacagacgt tacaacagga ggaactgtca acagcccccg ctatacgact tacattgata
    29401 aggacggcaa gccaggtaaa tatgcttcta tggggcatgc tggcggtcat ctgccagaag
    29461 gggcgaccta tgccgtccta gaagaccact attatccaaa ccacaaggct gtggacttct
    29521 accaccgtta taaagaagat atcaagctct tcgcaaaaat gggttactcc gttttccgct
    29581 tgtcaatttc atgggcacgg attttcccaa atggtgatga tgcagagcca aaccaagcag
    29641 gtcttgattt ctatcgttct gtttttgaag aatgccgcaa atatggcatt gagccattgg
    29701 tttccatttg gcacttcgat atacctttga acttggagca acgctatggt ggttggacca
    29761 atcgtaagtt gattgatttc tatgtccgct atgctgagac aatttttaat gaatataagg
    29821 gtttggtgaa atactggatt accttcaatg agattaacaa cactatcatg tttttggata
    29881 tgtttagtga accaaaggat tctgattacc aagatgccta ccaacactta catcaccaat
    29941 ttgttgcctc tgccaaggct gtaaaattag gacatcagat tgatccgagc tatcgattcg
    30001 gaaacatgat ttgtggaatc accttctacc caggaacctg tgaccctgcg gatattttag
    30061 aaaatcaaca caaatgggaa cagaatattt tctattgtag tgatgcacaa gccaaaggtc
    30121 gttatggttc ctatgcaaac agactgtgga aggaacacaa tgttgtattg caaatggaag
    30181 agggagacct agacatcctt gctgaaggta aggtggatat gtataccttc tcttattaca
    30241 tgtcaacagt tgtgaccact cataaagtgg aagacacggt ttctgggaac ttctcaatcg
    30301 gtgccaagaa cccttacttg acctattcag actggggatg ggcccaagat ccaactggac
    30361 tccaatacta tcttgaaaaa atctatgacc gttatgagat tccactcatg gttgtagaaa
    30421 atggattagg agctttggat acagttgaag aagacggctc tattcacgat gattaccgta
    30481 ttgactacca tcgtgcccat gtcaatgcca tggcagatgc cattgctaat ggtgttgatt
    30541 tgattggcta taccacttgg ggctgtattg acctagtatc agcagggaca ggtgaaatgc
    30601 gaaaacgcta cggctttatc tacgttgata tggatgatgc tggaaatggg tcacttgcta
    30661 gaacaccaaa agattcattc tactggtaca agaaagtcat tgccagcaat ggtgaggatg
    30721 tagaatgagg aagacggcag tgtgccgttt cagattgaag aagaagtcca ttttggacaa
    30781 ttttcttcaa tcttttttct ttatgatgaa aattaaaaac tctcagaaac gccgaaatat
    30841 caatgtttct aagagtttaa tgacttgcta tctttcacaa acttcttcaa ttttttatat
    30901 ttttaggagt ttgtctaggt tctgagacgg cactttgccg ttttctatta gggaaaggtt
    30961 tgaaaatgaa aatagaacat gtagcaatct acactcagga tttggaaggt atgcgtaatt
    31021 tctttgaaaa ctacttcaat gccacatcca atcagctcta ccataatcta aaaaccagtt
    31081 tcaagtccta ttttcttacc tttgaagacg gggctcgttt ggaaattatg accagagacg
    31141 atgtggtcga caaaccaagt caactcaatt atctaggact tattcattta gcctttagtc
    31201 tagggagtga ggaagctgtg gatgagttaa cagagcgact tgttgctgca ggctacttgc
    31261 ttcttagtgg accacgaata actggggacg gctactatga atcgtgtgtg ttgggatttg
    31321 atgatataca aattgaatta acagtgtaat gttggcaagt aatactgcta ggtcaatgtt
    31381 ttaacggata ggctagcaag tctcattcat tagcaatttc cttactgtta cggaaaaaac
    31441 tgcaatggtg atcgatgtaa acgtttgcta aac
//
LOCUS       DASFQD010000009        30445 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.009, whole genome shotgun sequence.
ACCESSION   DASFQD010000009 DASFQD010000000
VERSION     DASFQD010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 30445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30445
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.009"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(86..946)
                     /locus_tag="U1021_000321"
     CDS             complement(86..946)
                     /locus_tag="U1021_000321"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEM4710915.1"
                     /translation="MKIIIPATSANIGPGFDSVGVALSKYLTIEVFEETDEWVIEHNL
                     EHVPSDKNNLLIKTALKIEKGLQPHRIRMISDIPLARGLGSSSSVIVAGIELANQLAG
                     LNMTADEKLLKATEIEGHPDNVAPAIFGNLVISSYVNKRVQAVVTEFPEASFVAFIPN
                     YPLRTVESRGVLPSQMGYKKAVAASAIANVAVASLMAGDLEKAGKAIQSDMFHEPFRQ
                     LLVKEFCPIKQTAQELGAYATYLSGAGPTVMVLAPKDREDAIVLALEELNLDGTVHRL
                     QVDTKGIAIV"
     gene            complement(950..2236)
                     /locus_tag="U1021_000322"
     CDS             complement(950..2236)
                     /locus_tag="U1021_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019782768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEM4710916.1"
                     /translation="MVVKIGLLGFGTVASGVPFLLEENQEKIEKAAHDSIEVAKVLVK
                     DEAEKDRLLAAGHDYHFVTNIDDILADEDIAIVVELMGRIEPAKTFITRALEAGKHIV
                     TANKDLLAVHGSELRALAEEKGLALYYEAAVAGGIPILRTLVNSLAADKVTRILGVLN
                     GTSNFMLTKMVDEGWTYEKALQTAQELGYAESDPTNDVEGIDAAYKAVILSQFAFGMT
                     VDFEHVAHKGISNITPEDVAVAQELGYVIKLVGDIQESTSGIAAEVSPTFLPKNHPLA
                     SVNGVMNAVFVESIGIGQSMYYGPGAGQKPTATSVMADIIRIVRRLKDNTIGKAFNEY
                     SRPLQLAAPSDVKSEYYFSIDAPDKNGKMLRLAEIFNSEEISFKQILQQAADGETARL
                     VIVTHEMSKTQLENVTDKLSKETDFTVLNTFKVLGE"
     gene            2341..3264
                     /locus_tag="U1021_000323"
     CDS             2341..3264
                     /locus_tag="U1021_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEM4710917.1"
                     /translation="MKHSRRARRSRTQKKQLVPMLLGIALLVVTLLSIFLIFLKQPSK
                     QQSDSKASTVVTTTRSSVMTSESSEVQTEIIWEQQTEPIKLPILMYHAIHVMAPEEEA
                     NANLIVDPTTFESHLKALQDAGYYTLSPEEAYKVLTENVLPAGKKVVWLTFDDSLWDF
                     YSYAYPLLKQYQMKATNNVITGFTEYGQAGHLTLDQIREMQTAGLSFQGHTVNHPDLE
                     YSSIEDQTNELTSSKTYLDSQLNQETIAIAYPGGRYSADTVALTEQAGYKLGVTTNNG
                     LASASDGLLTLNRVRILPTTTAEGLLSEISY"
     gene            complement(3321..5090)
                     /locus_tag="U1021_000324"
     CDS             complement(3321..5090)
                     /locus_tag="U1021_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4710918.1"
                     /translation="MKNRSVFTRVWDYLRRYQSSVFLAVFLKTISAVMNALEPFVLGL
                     IITELTKNLLDIANGVEGAQINYSYIAIMLAIYALRALLYEIGAYGSNYFMTKAVQGA
                     TKELRQDLSHKINKIPVSYFDKHQYGDLLGRFTSDVETVSNALQQSFLQLVNAVLTLS
                     LAIFMCFWLDVSLALVVITLVPVTYFGSKFVMGKSQPYFKQQADALGRLNGFVQENLT
                     GFNVLKLYGREEISTEEFRQITADLQEVGFKASFMSGLLMPLVHGFSNIAYVVVALLS
                     GLKVLAGTLTVGNMQAFVQYVWQISQPVQTLTQLAPQLQSAKSSLERIFSVLDELDEE
                     DANALELTESLTGQVSFEQVEFGYSEDKPLIRNFNLDVQPGEMVAIVGPTGAGKTTLI
                     NLLMRFYDVTSGAIKVDGQDIRNLSRQSYRSQFGMVLQDAWLYEGTIKENLRFGRLDA
                     TDEEIVEVAKAANVDHFIRTLPGGYNMEMNQESSNISQGQKQLLTIARALLADPAILI
                     LDEATSSVDTRLELLIQKAMKRLMKGRTSFVIAHRLSTIQEADKILVLKDGQIIEQGN
                     HESLLADKGFYYNLYQSQFSESK"
     gene            complement(5099..6835)
                     /locus_tag="U1021_000325"
     CDS             complement(5099..6835)
                     /locus_tag="U1021_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002286381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4710919.1"
                     /translation="MNLIWTYLKKYPKWIALDLLGAFLFVVVNLGLPTFLARMIDQGI
                     TKNDVSQLYFWAGMMGLIVLLGIVGRVTLAYAAGKLTTNIVKDIRNDLYEKIQDYSHH
                     EYEQIGVSSLVARMTNDAFVLMQFSEMVLKLGIITPLMMIASVIMTLVTSPSLAWTVA
                     VAMPFLVFVIFYVATKTRPLSEKQQKRLDTINQYVRENLMGLRVIRAFTREEFQEERF
                     ESVNEEYTDISKKLFNLTGLTEPLFVQIIIAMIVAIVWFALDPLKTGSLQIGDLVAFI
                     EYSFHALFSFLLFANLFNMYPRMSVSSQRIQEVLDMPISISKNEDGITETDTRGYLEF
                     ENVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGRIL
                     VDGVDVRRYNLKALRSKIGFIPQKALLFTGTIAENLKYGKMDASLAELHDATDVAQAK
                     EFIESKEEKFDTHLAEGGSNLSGGQKQRLSIARAIVKQPDIYIFDDSFSALDYKTDAI
                     LRSRLKEVTENATVLIVAQRVGTIMDADQIIVLNEGEIVGRGTHNELMESNEIYREIA
                     NSQLNRQSLTEE"
     gene            complement(6911..7153)
                     /locus_tag="U1021_000326"
     CDS             complement(6911..7153)
                     /locus_tag="U1021_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000379626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HEM4710920.1"
                     /translation="MDMIENLIIAIVKPLISQPDSLTIKIVDTPEFLEYHLDLDQSDI
                     GRIIGRKGRTISAIRTIVYSVPTSDKKVRLVIDEKE"
     gene            complement(7175..7447)
                     /gene="rpsP"
                     /locus_tag="U1021_000327"
     CDS             complement(7175..7447)
                     /gene="rpsP"
                     /locus_tag="U1021_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002884675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEM4710921.1"
                     /translation="MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLL
                     AENSVTLKEERVLEWLAKGAQPSDTVRSLLSNAGVLKKFHEQKFSK"
     gene            complement(7572..7880)
                     /locus_tag="U1021_000328"
     CDS             complement(7572..7880)
                     /locus_tag="U1021_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HEM4710922.1"
                     /translation="MKNIMEARKRVVEMEKIFNRQLELNQSLSDSLSQLSQEQSTYLQ
                     LLDYYQSQTYMEDLDLSNKGHFNGIPCGVLSEDGVYNLLFDRTNLASQLRELADMLEQ
                     "
     gene            complement(7880..8527)
                     /gene="pcp"
                     /locus_tag="U1021_000329"
     CDS             complement(7880..8527)
                     /gene="pcp"
                     /locus_tag="U1021_000329"
                     /EC_number="3.4.19.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016398107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyroglutamyl-peptidase I"
                     /protein_id="HEM4710923.1"
                     /translation="MKIIVTGFDPFGGEPINPALETIKSLPKTIAGAEIILVEIPTVF
                     DKAADVLEEKMAEHLPDAVLCIGQAGGRVDLTPERIAINQDDARIPDNEGQQPIDRTI
                     REDGQPAYFSTLPIKAMVEAIHRIGLPASVSNTAGTFVCNHLMYQALYLAEKQFPKTK
                     AGFLHIPFLPEQVVDKPGLASMSLNDIVRGVEVAIGAIVEYRDKEDIKKGGGSTH"
     gene            complement(8524..9279)
                     /locus_tag="U1021_000330"
     CDS             complement(8524..9279)
                     /locus_tag="U1021_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM4710924.1"
                     /translation="MIVTTSLGMDEGLVYRARLIASELGIEYKERKKQSVGKMLGTYE
                     AVLVLYKDKLILEQRGGQVLFFHPDTAMLRIKSGRDPLLELLGKEKQSIIDCTMGLGS
                     DSIVLASAGHRVTALESSKLVHFIVSRGLQDFDSGLQEVNRAMKSIQTIWTDSLTYLK
                     GQKDKSVDVIYFDPMFSEEIKESQNLSGLSILADRSRLTEEIVSEAKRVARKKLIIKA
                     HFRDQVFEEFGFKRHVRPNQKFHYGEIILEEEV"
     gene            complement(9343..12522)
                     /gene="carB"
                     /locus_tag="U1021_000331"
     CDS             complement(9343..12522)
                     /gene="carB"
                     /locus_tag="U1021_000331"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019803305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEM4710925.1"
                     /translation="MPKRTDIKKIMVIGSGPIIIGQAAEFDYAGTQACLALKEEGYSV
                     VLVNSNPATIMTDKEIADKVYIEPITLEFVTRILRKERPDALLPTLGGQTGLNMAMEL
                     SKAGILDELGVELLGTKLSAIDQAEDRDLFKQLMEDLNQPIPESTIVTTVDEALEFAA
                     EIGYPVIVRPAFTLGGTGGGMCANEEELREIAENGLKLSPVTQCLIERSIAGFKEIEY
                     EVMRDAADNALVVCNMENFDPVGIHTGDSIVFAPTQTLSDIENQMLRDASLSIIRALK
                     IEGGCNVQLALDPHSFKYYVIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEM
                     VNPVTGTTYAMFEPALDYVVAKIPRFPFDKFEKGERRLGTQMKATGEVMAIGRNIEES
                     LLKACRSLEIGVYHNEMPELSQATDDQLVEKIVKAQDDRLFYLSEALRRGYTVEELAQ
                     LTKIDFFFLDKLLHILEIEQELATNFDNIDLLKTAKKYGFADCKIAELWGRTESYIRQ
                     LRTEHKIVPVYKMVDTCAAEFESATPYFYSTYEWENESIRSEKESVLVLGSGPIRIGQ
                     GVEFDYATVHSVKAIQAAGYEAIIMNSNPETVSTDFSVSDKLYFEPLTLEDVLNVIDL
                     EEPKGVIVQFGGQTAINLAEPLAKAGIPILGTQVADLDRAEDRDLFEKALKDLGIPQP
                     PGQTATNEEEALEAARKIGFPVLVRPSYVLGGRAMEIVENEEDLRSYMRTAVKASPEH
                     PILVDSYIVGRECEVDAISDGKDVLIPGIMEHIERAGVHSGDSMAVYPPQTLSKEVQA
                     IIADYTKRLAIGLNCIGMMNIQFVIKDETVYVIEVNPRASRTVPFLSKVTDIPMAQVA
                     TKLILGQSLAELGYQDGLYPESNQVHVKAPVFSFTKLAKVDSLLGPEMKSTGEIMGSD
                     VTLEKALYKAFEASYQHLAEFGNVVFTIADEDKEEVLGLAQRFYELGYGLLATAGTAA
                     FLTENGLAATTVGKLGDDSCPDIPSLVRAGKVQAIINTVGKKRVADGDGQVIRSSAIE
                     GGIPLFTALDTAEAMVKVLESRSFMTQAI"
     gene            complement(13031..14110)
                     /gene="carA"
                     /locus_tag="U1021_000332"
     CDS             complement(13031..14110)
                     /gene="carA"
                     /locus_tag="U1021_000332"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEM4710926.1"
                     /translation="MSKRRLILEDGTIFEGEAFGADIDVTGELVFSTGMTGYQESITD
                     QSYNGQILTFTYPLVGNYGINRDDYESIKPTCKGVVVSEWARRASNWRNQMTLDEFLK
                     AKKIPAISGIDTRALTKIIRQHGTMKATLANVGDSVEHLTDQLRATVLPTNNIQQVST
                     KTAYPAPGVGRSVVLVDFGLKHSILRELAKRDCNVTVVPYDTTAEEILALHPDGVMLS
                     NGPGNPDDVPEALEMIRGILGKIPIFGICMGHQLFAKANGAMTYKMKFGHRGFNHAVR
                     EIATGRVDFTSQNHGYAVAREDLPECLMITHEEINDKSVEGVRHKYYPGFSVQFHPDA
                     APGPHDASYLFDEFMELMDSFKKGQ"
     gene            complement(14358..15281)
                     /locus_tag="U1021_000333"
     CDS             complement(14358..15281)
                     /locus_tag="U1021_000333"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002889464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEM4710927.1"
                     /translation="MTITNGKVSLKHLVTMETLSNEEVLGLIQRGIAFKRGEKVELDR
                     KYYASNLFFEDSTRTHKSFEMAELRLDMGMIDFDARTSSVNKGETLYDTILTMSALGV
                     DICVIRHSEVDYYKQLIDSPTIQTSIVNGGDGSGQHPSQSLLDLMTIYEEFGTFEGLK
                     IAIAGDITHSRVAKSNMQILKRLGAEIFFAGPEEWYAEEFDVYGQHLNIDDIVETVDV
                     LMLLRVQHERHDGDGGFSKETYNRLHGLTEERYKRLKDTAIVMHPAPVNRDVEIDDSL
                     VEAPKSRIVRQMQNGVFVRMAILEAIVNGKA"
     gene            complement(15338..15859)
                     /gene="pyrR"
                     /locus_tag="U1021_000334"
     CDS             complement(15338..15859)
                     /gene="pyrR"
                     /locus_tag="U1021_000334"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HEM4710928.1"
                     /translation="MKTKEIVDDMTMKRAITRITYEIIERNKNLDNIVLAGIKTRGVF
                     IAKRIQERLKQLEGIDVPLGELDTKPFRDDVKVEEDTTSMTADVNDRDVILVDDVLYT
                     GRTIRAAIDNIVSLGRPARVSLAVLVDRGHRELPIRADYVGKNIPTSRSEEIIVHMAE
                     IDGQDSVLLVEGA"
     gene            complement(16058..16705)
                     /locus_tag="U1021_000335"
     CDS             complement(16058..16705)
                     /locus_tag="U1021_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Pr6Pr family membrane protein"
                     /protein_id="HEM4710929.1"
                     /translation="MKNQSFLFYSRCLLAALAITGTALEIIKYGIGMLMYYTVQSNLL
                     VSLFAVYMVYAMSKSVDLQTSRFLRIKAAVTMSIMITCVVYHFMLAPLADDFWRLENL
                     LCHYIVPLYFLLDTLIVDRQQQYKWFDPIWWTLLPVLYMIFGLVNGLFIKIPIPDAKD
                     SPFAYFFLNVPKYGWTYVLTYAGVIFVAYLVCGFLLAGLKSINLKTSLSFGKNSQ"
     gene            complement(16753..17091)
                     /locus_tag="U1021_000336"
     CDS             complement(16753..17091)
                     /locus_tag="U1021_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002920966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HEM4710930.1"
                     /translation="METLPNCPKCNSEYVYEDGALLVCPECAYEWNPADVAEEESGPV
                     AIDANGNRLADGDTVTLIKDLKVKGAPKDLKQGTRVKGIRIVEGDHNIDCKIDGFGAM
                     KLKSEFVKKI"
     gene            complement(17172..18065)
                     /locus_tag="U1021_000337"
     CDS             complement(17172..18065)
                     /locus_tag="U1021_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEM4710931.1"
                     /translation="MEVRVEIGGIRLDKALSDLTDLSRSVANEQIKAGQVLVNGQPKK
                     AKYSVQVGDVLTYQIPEVEEIDYVAEDIPLEIVFQDEDVAVVNKPQGMVVHPSAGHTS
                     GTLVNALLYHVKDLSGINGVLRPGIVHRIDKDTSGLLMIAKNDDAHTKLAAELKDKKS
                     LRKYWAIVHGNLPNDRGVIEAPIGRSEKDRKKQAVTAKGKEAVTRFQVLERFGDYTLV
                     ELTLETGRTHQIRVHMAYIGHPVAGDEAYGPRKTLKGHGQFLHARTLGFTHPRTGEVV
                     EFTAEAPAIFQEALEKLRKAE"
     gene            complement(18049..18513)
                     /locus_tag="U1021_000338"
     CDS             complement(18049..18513)
                     /locus_tag="U1021_000338"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001226252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEM4710932.1"
                     /translation="MRKIGFPFLMVELIGLDQFVKAWTVANIELDTVTEFIPGLMSLA
                     YLRNYGAAWSILQNQQWFFTIMTIVAVTGLVWYYIKQIKGNIWTLFSLSLMIAGALGN
                     FIDRLRLGYVVDMFHLDFISFPVFNVADMCLNVGVGILFICIMKEESNGSKS"
     gene            complement(18506..19420)
                     /locus_tag="U1021_000339"
     CDS             complement(18506..19420)
                     /locus_tag="U1021_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM4710933.1"
                     /translation="MNIQQLRYVVAIANSGTFREAAEKMYVSQPSLSISIRDLEKELG
                     FQIFSRTSSGTFLTQKGMEFYEKAQALVKGFDQFEHLYLQPEEGEKTFSISSQHYDFL
                     PPLITEFSRSHPQYPHFRIFESTTVQILDEVAQGYSELGIIYLNERNTKGIMQKLDKL
                     HLQAVDLSAFQTHIYLREDHPLTKKAEIDPVDLVGLPTVRFTQEKEAYLYYSENLIDT
                     SDSSVVFDVTDRATLNGILERTDAYATGSGYLDDESVNGITVIPLKGKVDNRMVYVKR
                     ANDELSSCAKDFIETMQAYFDKKKDENA"
     gene            complement(19503..19643)
                     /locus_tag="U1021_000340"
     CDS             complement(19503..19643)
                     /locus_tag="U1021_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014635961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM4710934.1"
                     /translation="MGPNLAKLVIDDLANRNSKAFQIAVEEEKLGTWKLYKKLVLKNR
                     TG"
     gene            complement(19853..20146)
                     /gene="rpmA"
                     /locus_tag="U1021_000341"
     CDS             complement(19853..20146)
                     /gene="rpmA"
                     /locus_tag="U1021_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEM4710935.1"
                     /translation="MLNLNLANLQFMAHKKGGGSTSNGRDSQAKRLGAKAADGQTVLG
                     GSILYRQRGTKIYPGANVGRGGDDTLYAKVEGVVRFERKGRDKKQVSVYPIAK"
     gene            complement(20192..20506)
                     /gene="rplU"
                     /locus_tag="U1021_000342"
     CDS             complement(20192..20506)
                     /gene="rplU"
                     /locus_tag="U1021_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEM4710936.1"
                     /translation="MSTYAIIKTGGKQVKVEVGQAIYVEKLNVEAGQEVTFEEVVLVG
                     GEKTVVGTPLVAGATVVGTVEKQGKQKKVVTFKYKPKKGSHRKQGHRQPYTKVVINAI
                     NA"
     misc_feature    complement(20542..20612)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00559"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L21 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00559"
     gene            complement(20678..22003)
                     /gene="brnQ"
                     /locus_tag="U1021_000343"
     CDS             complement(20678..22003)
                     /gene="brnQ"
                     /locus_tag="U1021_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HEM4710937.1"
                     /translation="MKKGALTGLLLFGMFFGAGNLIFPPALGVLSGENFWPAILGFVV
                     SGVGIAVVALIVGTLNPKGYVHEISRKISPTFATIYLVALYLAIGPFFAIPRTATTSF
                     EIGIAPLLSEANLGIWLFGFTALYFVAAYLIALNPSQILNSIGRILTPVFAILIVILV
                     MLGIVKYGSTSPLPASEAYSAGQAFGTGFIEGYNTLDALAAVAFSVVAVNTLKQLGFS
                     NKKEYVSTIWSVGFVVALAFSALYVGLAFLGNHFPVPADVLASDTNKGVYILSQATQA
                     IFGPGAQIFLAAMVIVTCFTTTAGLIVSSGEFFAERFPRFSYKVYATIFTLIGFGIAN
                     LGLNNIITFSVPVLLVLYPITICIVLITIVNKFVPLSTYGMQLTVGVVTALSLVEVLA
                     GQFNWTAISKIISALPLAGQSLAWLLPALVGIVLSLFLPNKQESEVFEM"
     gene            complement(22125..23342)
                     /gene="thiI"
                     /locus_tag="U1021_000344"
     CDS             complement(22125..23342)
                     /gene="thiI"
                     /locus_tag="U1021_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HEM4710938.1"
                     /translation="MNYSEIMIRYGELSTKGKNKMRFVNKLRNNIKHVLSVYPEVTVY
                     FDRDRGHVYLNGADYQDVSASLKKIFGIQNFAPSYKIEKSVPALKEAVVEIMQSIYKE
                     GMTFKIAARRSDHNFELDSRDLNQVLGDAVFTAIPNVQVQMKSPDITLRVEIRPDAAY
                     ISHEEIKGAGGLPVGTSGKGTLMLSGGIDSPVAGYLALKRGVEIEALHFASPPYTSPG
                     ALKKAHDLTRKLTAFGGNITFIEVPFTEIQEEIKEKAPEAYLMTLTRRFMMRITDRVR
                     EERGAMVIINGESLGQVASQTLESMQAINAVTNTPVIRPVVTMDKLEIIDIAQEIDTF
                     DISIQPFEDCCTIFAPDRPKTNPKIKNVEQYEARMDVEGLVERAVAGIIVTEITPKEE
                     VKDEVDSLIEDLL"
     gene            complement(23344..24486)
                     /locus_tag="U1021_000345"
     CDS             complement(23344..24486)
                     /locus_tag="U1021_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008533866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEM4710939.1"
                     /translation="MIYFDNAATTQVYPEVLKTYTEVATKIWGNPSSLHSLGSQATRI
                     LEASRKQIAELLGKDSKEIFFTSGGTEGDNWVIKGVAFEKAHLGKHIIVSAIEHPAVK
                     ESALWLKTQGFEVDLAPVNAQGFVDVSALESLIRPDTILVSIMAVNNEIGAIQPIQEI
                     SQLLADKPTISFHVDAVQAIGKVPTERYLTDRVDFASFSGHKFHSVRGVGFVYVKAGK
                     KIAPLLTGGGQESDKRSTTENVAGIAATAKALRLTLDKATDSQKRLVAMKQILVDELG
                     KYDDVTVFSGLEDFVHSIVTFGIKNIRGEVIVHAFEDHQIYISTTSACSSKAGKPAGT
                     LIAMGVPQKLAQTAVRISLDDDNDMGQIEQFLTIFKQIYQNTQKVR"
     gene            24600..25013
                     /locus_tag="U1021_000346"
     CDS             24600..25013
                     /locus_tag="U1021_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710940.1"
                     /translation="MRSTKRKEHVSALTKLQKFLTFIGSILGIITACITIYTFTAKST
                     VAHTNPSSSISSSSSTNTKTSSAVSPTINIQASTSSSTETTAPSQTETSSTVDYSSSS
                     TTTETSSSQEIQTSITETTSSTENSTEASTSSSQE"
     gene            25073..25456
                     /locus_tag="U1021_000347"
     CDS             25073..25456
                     /locus_tag="U1021_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710941.1"
                     /translation="MKYFILRIPILVWLLLFSFIEIFLLASFLPEPFNTNSLLPIVIL
                     SSCAVRVSNEVKERDGQYTPFKQLWWAVLAWIILGILFGLTVQAPLSKHLVFIIKAIL
                     GGIGYRLIERYTVYRYHYLQTKKKG"
     gene            complement(25476..26504)
                     /locus_tag="U1021_000348"
     CDS             complement(25476..26504)
                     /locus_tag="U1021_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016503195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid lyase"
                     /protein_id="HEM4710942.1"
                     /translation="MLHFENDYNKGAHPVLLEALVASNQEGLSGYGTDKYTESAIEKI
                     RLATDCPHAQVTFLAGGTQTNQIVISSMLASYEGVIAADTGHISTHEAGAIEFSGHKV
                     LTLPHHEGKITASGVDNFIKDFYADANHAHMVHPGMVYISHPTEYGTLYSKTELEALS
                     TVCRYHNIPLFLDGARLGYGLAARETDLDLKTIAELTDVFYIGGTKLGALMGEALVFT
                     KNNQPKNFVSIVKHHGALLAKGRVTGVQFDCLFTDDLYLELGRHAIAMAEQLIQILEE
                     KGFQFYLKSPTNQQFVIVKNEELARLTEAGIAYGFWEKYDDSHSIIRFATSWSTSQED
                     IDELRKIL"
     gene            complement(26565..26636)
                     /locus_tag="U1021_000349"
     tRNA            complement(26565..26636)
                     /locus_tag="U1021_000349"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26601..26603),aa:Arg,seq:ccg)
     gene            complement(26674..27879)
                     /gene="rpsA"
                     /locus_tag="U1021_000350"
     CDS             complement(26674..27879)
                     /gene="rpsA"
                     /locus_tag="U1021_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002897515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEM4710943.1"
                     /translation="MNEFEDLLNSVSEVTPGDVVTAEVLTVDAGQANVAISGTGVEGV
                     LTLRELTNDRDADINDLVKVGETLELLVLRQVVGKDTDTVTYLVSKKRLEARKAWDKL
                     VGREEEVVTVKVTRAVKGGLAVEFEGLRGFIPASMIDSRFTRNTERFVGQEFDAKIKE
                     VDPAENRFILSRRDVVEAEAAAARAEVFGKLAVGEVVTGKVARITSFGAFIDLGGVDG
                     LVHLTELSHERNVSPKSAVTVGEEVEVKVLAIDEVEGRVSLSLKATQPGPWDGVEQKL
                     AAGDVIEGKVKRLTDFGAFVEVLPGIDGLVHISQISHKRVENPKDALSVGQEVTVKVL
                     EVNAADERVSLSIKALEERPAAAEGEEKAEKRAPRPRRQKREEKRDYELPETQSGFSM
                     ADLFGDIEL"
     gene            complement(28003..28074)
                     /locus_tag="U1021_000351"
     tRNA            complement(28003..28074)
                     /locus_tag="U1021_000351"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(28040..28042),aa:Gln,seq:ttg)
     gene            complement(28213..28293)
                     /locus_tag="U1021_000352"
     tRNA            complement(28213..28293)
                     /locus_tag="U1021_000352"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(28257..28259),aa:Tyr,seq:gta)
     gene            complement(28345..28578)
                     /locus_tag="U1021_000353"
     CDS             complement(28345..28578)
                     /locus_tag="U1021_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2969 domain-containing protein"
                     /protein_id="HEM4710944.1"
                     /translation="MSKKDKKIEIQIEDSKVLVNREEFPGYRLVIGKKVIGEIAELAE
                     NNFAVIKNGNTESFYKKLEKAVENIIENYNLSH"
     gene            complement(28645..29667)
                     /locus_tag="U1021_000354"
     CDS             complement(28645..29667)
                     /locus_tag="U1021_000354"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009730267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HEM4710945.1"
                     /translation="MTVNIDWENLGFSYMKLPYRFIAHFKNGQWSEGQLTEDAELHIS
                     ESSPALHYGQQAFEGLKAYRTKEGKLQLFRPDQNAERLQRTADRLLMEPVPTDLFIKA
                     CKEVVKANADYVPPYGTGGTLYLRPLLIGVGDIIGVKPAEEYIFTVFAMPVGNYFKGG
                     LAPTNFLIQDKYDRAAPNGTGAAKVGGNYAASLLPGQYAKKQGFSDVIYLDPATHTKI
                     EEVGSANFFGITANNEFVTPISPSILPSITKYSLLYLAEHRLGMKAVEREVLVEELDQ
                     FVEAGACGTAAVISPIGGIQIADKLHIFHSETEVGPVTRKLYEELTGIQFGDIEAPEG
                     WIVEVD"
     gene            complement(29778..30395)
                     /locus_tag="U1021_000355"
     CDS             complement(29778..30395)
                     /locus_tag="U1021_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HEM4710946.1"
                     /translation="MKIIKLFFSIKVYLWLVLSFLLLLCGVWGYGYISGEKSNQQEVS
                     VHTAIESVEQVNELVFLNTAVQKIVTAKNYTVLFGQEMPFSEKSALLIIKYKAKFGIK
                     SPVSIEHLSENRYKITLPAFEVIGLELDAEEPYTLYDKSGEILSFATEEIDTAQLITD
                     EFQSAEQETFLADYQEDIKESAKTYYQNLFSAISPEIQLEFVFKE"
BASE COUNT         9001 a         7071 c         5680 g         8693 t
ORIGIN      
        1 gttcccttcc taccgcatat agtagcgacg gcgaactcca ataaaataaa catgtttagt
       61 tttgcaaatg acagattctc actatctata caatagcaat ccctttggta tctacttgaa
      121 ggcggtggac agttccgtct agatttagtt cctctaatgc tagaacaata gcatcctccc
      181 tatctttggg cgctaatacc atcactgttg gaccggcacc tgataagtag gttgcatagg
      241 ctcccaactc ctgtgcagtt tgcttgattg gacaaaactc cttaacaagt agctgacgaa
      301 acggttcatg gaacatgtct gactgaattg ctttcccagc tttttccaga tcacctgcca
      361 tcaaactggc aacagcaacg tttgcaatgg cactagcagc cactgctttc ttgtacccca
      421 tctgagaagg cagtacacct cggctttcaa ccgtacgcag tgggtagttt ggaataaagg
      481 caacaaaact tgcttctggg aattctgtta caactgcctg tactctctta ttaacatagc
      541 tagagatgac taaattacca aaaatcgctg gggctacatt atcaggatgt ccttcaattt
      601 ctgtagcttt gagcaatttt tcatccgctg tcatattcaa acctgctaat tgattagcca
      661 attcgatacc agctacgata acggaactgg atgaacccaa accacgtgcc aagggaatat
      721 cactaatcat tctgatacga tgcggctgca atcctttttc aatctttaaa gctgtcttga
      781 tcaaaagatt gttcttgtct gatggaacat gttcaagatt gtgctcaatc acccattcat
      841 cagtctcttc aaatacttca atcgttagat atttcgaaag ggcaacacct actgaatcaa
      901 atcctggacc gatattagct gaagttgctg gaataataat tttcattgct tattctccca
      961 gtactttaaa ggtatttaag acagtaaagt ctgtttcttt actcaatttg tctgttacat
     1021 tttccaactg agtcttactc atttcatggg tcacaatcac taggcgagct gtttctccat
     1081 ctgcagcttg ttgcagaatt tgcttgaagg aaatttcttc agaattgaag atttctgcta
     1141 aacgaagcat ttttccattt ttatcaggcg catcaattga gaaataatat tcgcttttca
     1201 catcgcttgg ggctgccaat tgaagtgggc ggctatattc gttaaaagct ttgccgatag
     1261 tattgtcttt caagcgacga acgatacgaa taatgtcagc cataacactt gttgcagtcg
     1321 gtttttgccc agcgcctggt ccatagtaca tagactggcc gatgccgata gattcgacaa
     1381 atacagcatt catcacaccg ttcacgcttg caagtggatg atttttcggt aggaaggttg
     1441 gagatacttc ggcagcaata ccagaggtac tttcttgaat atcacccaca agtttgatga
     1501 catagcccaa ttcttgtgcc actgctacat cttctggcgt gatatttgag atacccttgt
     1561 gtgctacgtg ttcaaaatca actgtcatcc cgaaagcaaa ttgactgagg ataacagcct
     1621 tgtaagccgc atcaatcccc tcaacgtcat ttgttgggtc agattctgca tagccaagtt
     1681 cctgtgctgt ttgaagtgct ttttcgtaag tccagccttc atcaaccatc ttagtcaaca
     1741 tgaagtttga agtaccattc aatacaccga ggatacgagt caccttatca gcagccaaag
     1801 agttgaccaa ggtacgcaag attggaatac cacctgcaac tgcagcttca taataaagcg
     1861 caagaccttt ctcttcagcc agggcacgca attcgctacc atgaacagca agtaaatcct
     1921 tattggctgt tacaatatgc ttgccagctt ccaaggcacg tgtaataaat gtttttgctg
     1981 gctcaatacg tcccatcagc tcaacgacga tggcaatgtc ctcatcagcc aaaatgtcat
     2041 caatatttgt cacaaaatga tagtcatgac ctgcagccaa gagacggtct ttttctgctt
     2101 catccttgac caaaacctta gcaacttcaa tactatcatg cgcggctttc tctatttttt
     2161 cctggttttc ttctaataaa aatggcacac cactcgcaac ggttccaaat cctaataatc
     2221 ctatcttaac taccatgtgc tctcctttaa aatgtatttc tcccattata acaaatattc
     2281 tgactatttg gcaaaaaatt tgatataatt gttttaatat atgattatgg agataagata
     2341 atgaaacatt caagaagagc ccgtcgaagc cgcacacaaa agaaacaact tgtgccaatg
     2401 ctacttggca tcgcattatt agtagtgact ctactatcta tttttctaat ctttctaaaa
     2461 cagccatcta agcaacaaag tgattccaaa gcttcaacgg tagtgacaac aacccgttcg
     2521 agtgttatga cttcagaaag tagtgaagta caaacagaaa tcatttggga acaacaaact
     2581 gaacctatca aacttccaat cctcatgtat catgccattc acgtaatggc tcctgaggaa
     2641 gaagctaatg cgaatcttat cgtagatcca acaactttcg aaagtcatct aaaagcattg
     2701 caagatgcag gttactatac tttatcacct gaagaggctt ataaggtatt gacagaaaat
     2761 gtccttcctg ctggcaaaaa ggttgtctgg ctaacctttg acgatagcct ctgggatttt
     2821 tatagttatg cctatccatt gcttaagcaa tatcaaatga aggcaaccaa caatgtcatt
     2881 acagggttta ctgaatatgg acaagcaggg caccttactc ttgatcaaat cagggaaatg
     2941 cagactgcag gcctctcctt ccaagggcat accgtcaacc atcctgattt agagtatagt
     3001 tctatcgagg atcaaacaaa tgaacttact tcctctaaaa cctatcttga cagccaatta
     3061 aatcaggaaa ccatcgctat cgcctaccct ggtggacgat actcagcaga tacagtagcc
     3121 ttaactgaac aagctggcta caaacttggt gtgactacta acaacggctt agcttctgct
     3181 agtgacggat tactgactct caatcgtgtc cgcatcctcc caaccactac cgctgaggga
     3241 ctattatccg aaatttccta ttaattttca caaacatgta tatgagaaaa ctccctgtca
     3301 ctgacaaggg agttcgtttt ttatttggac tcactaaact ggctttgata aagattataa
     3361 tagaaacctt tgtctgccaa aagactttca tggttacctt gttcgataat ctgtccatct
     3421 ttcaagacca aaatcttatc agcttcctga atggtagata agcgatgagc gatgacgaaa
     3481 cttgtccgcc ctttcatcaa ccgtttcatg gctttttgaa tcaagagttc caaacgggta
     3541 tcaactgaag aagtcgcttc gtcaagaatc agaatagcag gatccgccaa caaggcacgc
     3601 gcaatggtca aaagctgttt ctgaccttgg gaaatattgc tggattcctg gttcatttcc
     3661 atattataac caccaggcag ggtacggata aagtggtcaa cgttggcagc tttagcaacc
     3721 tccacaattt cctcatccgt cgcatccaga cgtccaaaac gcaggttttc cttgatggtc
     3781 ccttcataga gccaagcatc ctgcaagacc atgccaaatt gactacggta ggattgacga
     3841 gaaagatttc gaatatcctg cccatctacc ttgatagcac ctgatgtgac atcatagaaa
     3901 cgcatgagaa ggttgatgag ggtagtctta cctgcccctg ttggaccaac gatggccacc
     3961 atctcaccgg gttgaacatc cagattaaag ttacggatga gcggcttatc ttctgaatag
     4021 ccaaattcga cctgctcaaa gctgacttgt ccggtcagac tttctgtcaa ctctagtgca
     4081 ttggcgtctt cttcgtcaag ctcatctaag actgaaaaga tgcgttcaag ggaagatttg
     4141 gcagactgca actgtggtgc caattgggtc aaggtttgga ctggctgaga aatctgccag
     4201 acgtattgga cgaaggcctg catattaccc accgtcaatg tacctgcaag aactttcaat
     4261 ccagatagca gggcgacgac aacgtaggcg atgtttgaga agccgtgaac tagaggcatg
     4321 agcaaaccag acatgaaact agccttgaaa ccaacttcct gcaaatctgc ggtaatctgg
     4381 cgaaactctt ctgtagaaat ttcttcacgg ccgtagagtt tgagaacgtt aaaaccagtc
     4441 agattttctt ggacaaagcc gttcaaacga cctagggcat cagcctgctg cttgaaatat
     4501 ggctgggatt tgcccatgac aaacttagaa ccaaaatagg tcactggaac caaggttatg
     4561 actacaagtg ctagggatac atccaaccag aaacacatga aaatggctag agagagggtc
     4621 agaacggcat tgactagctg gagaaaactt tgttgcaggg cgtttgaaac agtctccaca
     4681 tcgcttgtaa aacgtccaag taaatcacca tactggtgct tgtcaaaata agatactgga
     4741 atcttgttaa ttttgtggct caaatcctga cgtagttcct tagttgctcc ctgcactgcc
     4801 ttggtcataa aatagttaga accgtaggca ccgatttcat atagaagggc gcgaagggca
     4861 tagatggcaa gcatgatggc aatgtaggaa tagttaatct gcgctccttc tactccatta
     4921 gcaatatcca acaaattctt ggtcaattct gtaatgataa gccccagcac aaagggttct
     4981 aaggcattca taactgcact gatggtcttt agaaaaacgg ctaaaaatac agaagattgg
     5041 taacgacgca aatagtccca aacacgggta aatactgatc tattcttcat aattcctcct
     5101 attcttctgt taacgattga cggttaagtt gagagttggc aatttctcgg taaatctcat
     5161 tgctttccat caattcattg tgggtgccgc ggccaacgat ttcaccttcg ttcagcacga
     5221 taatctggtc agcatccata atggttccga cacgttgagc cacaattagc accgtcgcat
     5281 tttccgtcac ttccttcaaa cgactccgca aaattgcatc cgtcttataa tccaatgctg
     5341 agaaagaatc atcaaaaatg taaatatccg gctgcttcac aatagcacgt gcaatggaca
     5401 aacgttgctt ttgcccgcct gacaggttgc tgccgccctc agccaagtgg gtgtcgaatt
     5461 tttcttcctt actctcgata aactccttag cctgagccac atctgtcgca tcatgaagtt
     5521 ctgcaagact agcatccatc ttaccgtact ttaagttttc cgcgatagtt ccggtaaata
     5581 gcagagcttt ctgtggaata aagccaatct tgctgcggag tgcctttaga ttgtagcgtc
     5641 tgacatccac accgtccacc aagatacgac caagtgtcac atcatagaaa cgtggaatca
     5701 agttgaccaa ggaagactta ccagaacctg ttgaaccaat aaaggcaatc gtttcaccag
     5761 gcttagcttt gaaggaaata ttgtgcagca caggcgattc cgtttcacca gggtaggcaa
     5821 aagttacatt ttcaaattcc aaataaccac gagtatctgt ttcagttatg ccgtcttcat
     5881 tcttagaaat agaaatcggc atatctagca cttcttgaat tcgctgacta gacaccgaca
     5941 tacgtggata catgttaaac aagttagcaa agagcaagaa agagaaaagc gcgtggaaac
     6001 tatattcgat aaaggctacc aaatcaccga tttgcagact gcctgttttc aagggatcca
     6061 aagcaaacca gacaatggcc acaatcatag caatgataat ctggacaaag agaggctctg
     6121 tcaatccagt cagattaaag agctttttgg aaatatcggt atattcctca ttgaccgact
     6181 caaagcgctc ctcttgaaac tcctcacgag taaaggcacg aatgacacgt aagcccatga
     6241 gattttcacg aacatattgg ttgatcgtat ccaaacgttt ctgttgcttt tcagaaagag
     6301 gacgagtttt agtagctaca taaaaaatga cgaaaaccaa aaatggcata gctactgcta
     6361 ctgtccaggc taagctcgga ctggttacca aggtcatgat gacagaagca atcatcatca
     6421 agggtgtaat aatacctagt ttcaagacca tttcagagaa ttgcatgaga acaaaagcat
     6481 catttgtcat acgagcaact agagaagaaa caccaatctg ctcatattca tgatgagaat
     6541 agtcctgaat tttctcatac agatcatttc gaatatcttt gacgatgttg gtagtcaact
     6601 ttccagctgc ataggcaagt gtcactcgac caacaatccc gagcaggaca atcaatccca
     6661 tcatccccgc ccagaaatag agctgactaa catcgttctt tgtaattcct tggtcaatca
     6721 tcctagccaa aaaagtcggc aagcctaagt ttaccactac aaataagaag gcccccaaca
     6781 agtctaaggc aatccactta ggatattttt tcaaataggt ccaaatcaga ttcatcattt
     6841 cttcctttct atatgttaaa aaggggctag gcccctttgt caacgttaaa agccaccaaa
     6901 cggtgacttt ctattctttc tcgtcgatca ctaaacgaac ttttttatca cttgttggaa
     6961 cagaatagac aatcgttctg attgcagaaa ttgtgcgtcc ttttctacca atgatacgtc
     7021 caatatcaga ttgatccaaa tccaaatgat attccaagaa ttcaggtgta tcaacaattt
     7081 ttattgtcaa gctatcaggc tgtgaaatca aaggtttcac aatcgcaata atgagatttt
     7141 caatcatgtc cataagtgtt ctcgcttact gttcttactt agagaatttt tgttcgtgga
     7201 atttcttcaa tacgccagcg tttgaaagaa ggctacgaac tgtatcagat ggttgtgcac
     7261 cttttgccaa ccactcaagt acacgctctt ctttaagagt tactgagttt tcagccaaaa
     7321 gtgggttgta agtaccaaca gtttcgatga aacgaccatc acgtggtgca cgtgagtctg
     7381 caacgttgat acggtagaaa ggtttctttt tagaacccat acgagtcaaa cggattttta
     7441 ctgccatttt taaatgttct cttttctttg tatttttatt cggtgaaata gcagagctat
     7501 ttagcacatg ttctattata ccacacttta acagggtgtc aagaaaaaaa cttgacaggt
     7561 tttaaaaaaa tttattgttc gagcatatct gctagttctc tcagttgact tgctagattt
     7621 gtacggtcaa acagtaaatt atagactcca tcttcactca atactccgca aggaatacca
     7681 ttgaaatgcc ccttattaga taaatcaaga tcttccatat aggtctggct ctggtaataa
     7741 tctaataact gtaaataagt cgattgttcc tggctaagtt gtgacagact atcggaaagg
     7801 gactggttca gctctagctg tctgttaaat attttttcca tttccactac acgttttctt
     7861 gcttccataa tatttttcat cagtgtgtac tgccaccacc ctttttaata tcctctttat
     7921 ctctatattc aacaatcgct cctatagcta cttcaactcc tcttacaata tcgttcaaag
     7981 acatggaagc cagtcctggt ttgtcgacaa cctgctctgg caagaaggga atatggagaa
     8041 atcctgcctt agtctttgga aattgtttct ccgccaagta aagagcttga tacatgagat
     8101 ggttgcagac aaaggtccca gcagtattag aaacagaagc tggaagccca atcctatgaa
     8161 tcgcttcaac cattgctttg atgggtaagg tggagaaata agcaggctga ccatcttctc
     8221 gaatcgttct atcaatcggc tgttgccctt cattgtctgg aatacgtgca tcatcttggt
     8281 taatggctat acgctcagga gttaaatcaa ctcgaccacc agcctgacca atacatagta
     8341 ccgcatcagg taaatgttcc gccatttttt cctctaaaac atccgcagcc ttgtcaaaaa
     8401 cagtcggaat ctctacaaga ataatctctg caccagcaat ggtcttaggt agagatttga
     8461 ttgtttccaa ggctgggtta ataggctcgc caccaaaggg atcaaagcct gttacgatga
     8521 ttttcatact tcctcctcca aaataatttc tccgtagtga aatttttgat tgggtctgac
     8581 atgacgttta aagccaaatt cttcaaagac ctgatctcga aaatgagcct ttattatcaa
     8641 tttcttccta gctactcgtt tagcctcaga tacaatttcc tccgttaaac gacttctgtc
     8701 agccaaaata gacaagccag aaagattttg tgattccttg atttcttctg aaaacatggg
     8761 atcaaagtaa atgacatcaa cagacttatc tttttgccct ttcaaataag tcaaactatc
     8821 tgtccaaatt gtctggatag atttcatggc tcgattgacc tcttgcagcc cactatcaaa
     8881 atcctgtaaa cctcgactca caataaagtg cactagctta gaactttcca aggctgtcac
     8941 ccgatgaccg gcacttgcta acacaatgct atcagatccc aagcccatag tacagtctat
     9001 tattgattgt ttttcttttc caagtaattc caaaagcgga tctcttccag acttaatccg
     9061 caacatggca gtatctgggt ggaaaaataa aacctgccca cccctctgct ctagtatcaa
     9121 tttatcctta taaagaacca agacagcctc gtaggtacct aacatttttc caaccgactg
     9181 cttctttctt tccttgtatt caattcctag ttcactggca atcagtctag ccctatagac
     9241 cagcccctca tccatcccaa gactagttgt tacaatcatt ttcatactct tcagtatatc
     9301 aaaaaatcag gacgaactca aagctcatcc tgatagtatc ttctatatag cctgtgtcat
     9361 gaagctacgg ctctccagca ctttgaccat agcttctgct gtatcgaggg ctgtaaagag
     9421 cggaattcct ccttcaatag cagagcttcg aatcacttgt ccgtcgccat cggccacacg
     9481 ttttttccca accgtattga taatagcctg aaccttacct gcccgaacaa gactaggaat
     9541 atctggacag gaatcatcgc ctaatttacc aacagttgtt gcagcaagtc cattttctgt
     9601 tagaaaggcg gctgttcctg ccgtagccag taggccataa ccaagttcat agaaacgttg
     9661 agccagacca agcacttctt ccttgtcttc atccgcaatg gtaaagacaa cgttgccaaa
     9721 ctcagccagg tgctgataac ttgcctcaaa agccttataa agtgcttttt ccagtgtcac
     9781 gtctgaaccc ataatttcac cagtagattt catctcaggt cccagcaaac tatctacttt
     9841 tgctagtttc gtgaacgaga agaccggtgc cttgacgtgc acttggttgc tctcaggata
     9901 aagaccgtct tggtagccaa gttccgcaag gctttgtccc aaaatcaatt tggttgcaac
     9961 ctgagccatt ggaatgtctg tgactttgga caagaatggc accgtacgac tagcacgagg
    10021 attgacctca atcacataaa ccgtttcatc cttgatgaca aactggatat tcatcatacc
    10081 gatacagttg agaccgattg ccaagcgttt ggtgtagtct gcaatgatcg cctgcacttc
    10141 tttggataag gtttgtggcg gataaactgc catcgagtca cctgagtgaa ctccagcgcg
    10201 ctcgatatgc tccataatac ccggaatcaa gacatcctta ccatctgaaa tagcatccac
    10261 ttcacactca cgaccgacga tgtaagaatc caccaaaatt gggtgctctg gcgaagcctt
    10321 gaccgcagtt ctcatataag aacgtaagtc ctcttcattt tcgacaatct ccatagcacg
    10381 accgcccaag acatatgatg gacgaacaag taccgggaaa ccaattttgc gggccgcttc
    10441 aagagcttcc tcttcgttgg ttgcggtttg gcctggtggc tgtggaatcc ctaggtcttt
    10501 cagggctttt tcaaataaat ccctgtcttc agctctatcc aaatccgcca cctgtgtccc
    10561 caagattgga atgcctgctt tggccaatgg ctctgccaaa ttgatagccg tctggccacc
    10621 gaactgaacg ataacccctt tgggttcctc aaggtcgatc acattcaaaa catcttccaa
    10681 ggtcaacggc tcgaagtaaa gtttgtctga aaccgaaaag tcagttgaca cagtttcagg
    10741 gtttgagttc ataatgatgg cttcgtagcc agccgcctga atggccttga cagaatgcac
    10801 cgtcgcatag tcaaactcca caccctgacc gatacgaatt ggaccagaac ccagcaccaa
    10861 aacagattct ttctccgaac ggatggactc attttcccac tcataagttg aatagaaata
    10921 aggtgtagca ctttcaaact cagccgcaca agtgtccacc atcttgtaaa cagggacaat
    10981 tttgtgctct gtccgcagtt gacgaatgta ggattctgtc cgtccccaga gttccgcaat
    11041 cttgcagtct gcaaaaccgt atttcttggc tgttttcaat aaatcaatat tatcaaaatt
    11101 cgttgccaat tcctgctcga tttctaagat atgaagcagc ttgtcaagga agaaaaaatc
    11161 aatcttcgtc aactgagcca gttcttctac tgtataacca cgtcgaaggg cttctgaaag
    11221 atagaataaa cgatcatcct gtgccttgac aatcttttca actaattggt catctgttgc
    11281 ttggctgagt tctggcattt cattgtgata aacaccgatt tctaaagaac ggcaggcctt
    11341 gagcagactt tcttcgatat tacgcccaat ggccatgacc tctccagttg ccttcatctg
    11401 cgttccaagg cgacgctccc ctttttcaaa cttatcaaat gggaaacgtg gaatttttgc
    11461 cacaacgtag tcaagagcag gctcaaacat ggcataggtt gttcctgtaa cagggttcac
    11521 catttcatcc aaggtcaagc caaccgcaat ttttgctgcc aatttggcaa taggataacc
    11581 tgtcgctttc gatgccaagg cagacgaacg ggacacacgt gggtttactt caatgacata
    11641 atatttgaaa ctatgtggat caagtgccaa ctgcacatta cacccacctt cgattttgag
    11701 agcacggatg atgctgagac tggcatcacg cagcatctgg ttttcaatat ccgaaagcgt
    11761 ctgcgttggg gcaaatacga tagaatctcc tgtatgaatt cccacagggt caaagttttc
    11821 catgttacat acgaccaagg cattgtcagc cgcatcgcgc atcacttcgt attcaatttc
    11881 tttgaaacca gcaatggaac gctcaatcaa acactgggtc accggtgaca atttcagacc
    11941 attttctgct atttcacgca gttcttcttc attggcacac ataccaccgc cagtaccacc
    12001 cagcgtgaag gctggacgaa caatgacagg atagccaatt tcagcagcaa attccaaagc
    12061 ctcatcaact gttgtcacaa tcgttgactc aggaataggc tgattgagat cttccatgag
    12121 ttgtttgaag aggtcgcggt cctctgcctg atcaattgca gacagtttag ttcccaacaa
    12181 ctcaactcca agctcatcta aaataccagc cttagacaat tccatggcca tgttgagacc
    12241 agtctgacca cccagggttg gcaagagagc atctggacgc tccttccgta aaatccgtgt
    12301 gacaaattca agcgtaattg gctcaatata aaccttgtct gcaatttcct tgtctgtcat
    12361 gatggtcgca gggtttgaat tgaccaagac aacactatag ccttcttcct tcaaagccaa
    12421 acaagcctga gtcccagcat aatcaaactc cgcagcctga ccgataataa tcggaccaga
    12481 cccaatcacc ataattttct taatatccgt acgttttggc ataatgtatg atacaaagcc
    12541 cgttaagagg acaaagcgaa aataggaaac acgacgctaa tgcttcaagc atcaagacga
    12601 tgtttatctt tttcgcacag tccttagggc gtgttcgaat aggaaactcg aacctgtatc
    12661 tctcctttct attttctatc tctccggata gaattaaata attgtccgac gtgagaaaat
    12721 ggattcgaca ttaatccatt ttcgagctag tgcaagggat agcctgacct ccatagaggc
    12781 aggcgtaggg aaatgagttg ctcgcaacca ttgatctatc ccttgccttt ctattcgtcg
    12841 cctctctgag caacattaaa taagataagt ccgacgttta gaatctcaat tcgataataa
    12901 ttgaaattct aaactagtgt cagagttagc aaaggtccca taggactttg cgtaggagga
    12961 cacatgcctt ccatgtagtc cgacttactc tgaccgacgc agttaggtat agctcgatat
    13021 tagttaaacc ttactgccct tttttaaacg aatccatcaa ttccataaat tcgtcaaaca
    13081 aatagctggc atcatgtgga ccaggtgcag catctgggtg gaattgaaca gagaaacctg
    13141 gatagtactt gtggcgtacc ccttctactg atttgtcatt gatttcttca tgagtaatca
    13201 ttaaacattc aggtaaatct tcacgagcca ctgcataacc gtggttctga ctggtaaagt
    13261 ccactcgacc tgtcgcaatt tcacgaacag catggttgaa accacggtga ccaaacttca
    13321 ttttataagt cattgcccca tttgctttag caaagagttg gtgccccata cagatgccaa
    13381 aaattggaat tttcccaaga atcccacgaa tcatttctag cgcttctgga acatcatctg
    13441 gatttcctgg gccgtttgat agcataacac catcaggatg gagagcaaga atttcttcag
    13501 cagtagtatc ataagggaca actgtcacat tgcaatcacg cttggctaac tctctaagaa
    13561 tagaatgttt caatccaaaa tcgaccaaaa caacactacg tccaactcca ggtgcaggat
    13621 aggctgtttt tgtcgatact tgctggatgt tgttggttgg caaaacagtc gctctcaatt
    13681 gatccgtcaa atgctcaaca gaatcaccga catttgccaa tgtcgccttc atggtcccgt
    13741 gctgacgaat aattttagtt agggcgcgtg tgtcaattcc agaaattgct ggaattttct
    13801 tagcctttaa aaattcatcc aaagtcatct ggttacgcca attacttgct cgacgagccc
    13861 actcgctaac aaccactccc ttacaagtcg gtttgatcga ctcgtaatca tcacggttaa
    13921 tcccgtaatt tcctaccaag ggatatgtaa aggttaaaat ctgaccatta taagactggt
    13981 ccgtgatgga ttcctgataa cctgtcatcc cagttgagaa aaccaactca ccagtcacat
    14041 caatatcagc accgaaggcc tccccttcaa aaatagtgcc atcttccaaa attaaacgtc
    14101 tttttgacat aatctatgat acaaagcccg ttaaaaggac aaagtgaaaa taggaaattc
    14161 ggcgccgacg ctataggcgt caagtcgata tttatctttt tcacacagtc cttagggcgt
    14221 gttcgaatat aaaaatcaaa tcttactcga acctgtacct tctcctttct attcgtcgcc
    14281 tctctgagcg acattaaata agataagtct aacaaatttc taactgctca gtactaaggt
    14341 acctgaacag cttactttta agccttgcca ttgacaattg cttccaaaat cgccatacgg
    14401 acaaatacac cattctgcat ttggcggaca atacgtgatt tgggtgcttc aactagagaa
    14461 tcatcaatct caacatcgcg attgacaggg gccggatgca taacaattgc agtatctttc
    14521 aagcgtttgt agcgctcctc tgttaaacca tgcaaacggt tataagtttc tttagaaaag
    14581 ccaccatcac catcatgacg ctcgtgttgc acacggagca acatcagtac atctaccgtt
    14641 tccacaatat catcaatatt caaatgctga ccatagacat caaattcctc tgcgtaccat
    14701 tcctccggtc cagcaaagaa aatctcagct cccagacgct tcaaaatttg catattggac
    14761 ttagcaaccc gtgagtgtgt aatatcacct gcaatggcaa tcttcaagcc ttcaaaagtt
    14821 ccaaattctt cataaatagt catcaaatca agtagggatt ggcttgggtg ttggcctgaa
    14881 ccatcaccac cattgacaat tgaagtctga atggtaggac tatcaatcaa ttgcttgtaa
    14941 taatccactt ccgagtgacg aatgacacag atatcgaccc ctaaagctga catggtcaaa
    15001 attgtatcat acaaggtttc acccttattg accgaactgg tacgagcatc aaagtcaatc
    15061 attcccatat ccaaacgaag ctccgccatt tcaaaagact tatgcgtccg agttgaatcc
    15121 tcaaagaaaa ggttagaagc atagtacttc cgatccaact ctaccttttc accgcgttta
    15181 aaagcaatac cacgttgaat gagtcccaat acttcttcat ttgagagggt ctccattgta
    15241 accaagtgtt tgagtgaaac tttaccattt gtaattgtca tgacgatacc tgcctttagg
    15301 atataaaatg tagaatattg aattgaaaaa taaacgacta agctccctcg actaggagga
    15361 cagaatcctg accatcgatt tcagccatgt gaacgatgat ttcttccgaa cggctagttg
    15421 ggatattctt cccaacataa tctgctcgaa taggcaactc cctgtgtcca cgatccacaa
    15481 gtaccgctaa actaacacga gctggacggc ccaaggacac tatgttgtca atagccgcac
    15541 gaatggttcg gcctgtatag agcacatcat ctaccaaaat aacatcacgg tcattcacat
    15601 cagcagtcat gcttgtcgta tcttcttcga cttttacatc atcacggaaa ggtttggtat
    15661 ccaattcacc cagtggaaca tcaataccct ctaattgctt cagtctttcc tgaatacgtt
    15721 tagcaatgaa caccccacgg gttttaatcc ctgcaaggac aatattatcc aaattcttat
    15781 tccgttcgat aatttcataa gtgatacggg tgattgcccg tttcatagtc atatcgtcaa
    15841 cgatttcttt tgtcttcata agacctccaa aagtatagaa aaagtctcct tatacaagga
    15901 gactatgaaa atataggcta gttagaacca acctgcttaa catccgactc cttgtctgcc
    15961 tctctggaca ggttttaaag gatttattaa gcagagtata gcataaaatc tcagccttga
    16021 caattttttt ctgaaaaaat atagaaatta tcggatttta ctgagaattt tttccaaaag
    16081 acaatgaagt cttaaggttt atggatttta gtcccgccaa tagaaaaccg cagactagat
    16141 aggcgacaaa gatgactcca gcataagtca aaacataggt ccaaccatac ttagggacat
    16201 taagaaagaa ataagcaaaa ggactgtcct tagcatctgg gattggaatt tttatgaaaa
    16261 gaccattcac tagaccaaaa atcatgtaga gaacaggcaa aagcgtccac caaatcgggt
    16321 caaaccactt gtactgttgc tgacgatcta ctattagggt atctaacaaa aaatataagg
    16381 gaacaatata atggcagagt agattttcaa gtcgccagaa atcgtctgcc aaaggcgcca
    16441 acataaagtg atagactaca caagtaatca tgatagacat ggttacagca gcctttatcc
    16501 gaagaaaacg tgacgtctgt aaatccacac ttttactcat ggcatagacc atatagacag
    16561 caaacagaga taccaataaa ttagattgta ccgtataata catgagcatc ccgataccgt
    16621 atttaatgat ttctagagca gttcccgtaa tcgctaaagc agccagtaaa catctgctat
    16681 aaaataaaaa actttgattc ttcatactat cctttcaaaa acaggaaaag actggttaac
    16741 cagtcctctc tcttagattt tcttaacaaa ttcagatttc aacttcatgg caccaaaacc
    16801 atcgatttta caatcaatat tatgatcgcc ttcaacgata cggatgcctt taacgcgtgt
    16861 accttgttta aggtccttag gcgcaccttt cactttcaag tctttgataa gcgtcacagt
    16921 atcgccgtcc gccaaacgat taccgttagc atcaattgca acaggtccac tttcttcctc
    16981 agctacatct gctgggttcc actcgtaagc acactcaggg caaaccaaga gggcaccatc
    17041 ttcatagaca tattcagaat tacattttgg acaatttggt aaagtttcca ttcttactct
    17101 ccttaacatt tttcatgttc tagtatagca tttgttgaaa aaatgggcaa gatgataagg
    17161 ttttcatact attattcagc cttgcgcagt ttttcaagtg cctcctgaaa aatagctggc
    17221 gcttctgccg taaattcaac aacctcgcca gttctcggat gggtaaatcc aagcgttctg
    17281 gcatgaagaa attggccatg cccttttagt gttttccttg ggccgtaagc ttcatcaccc
    17341 gcaaccggat gaccaatata agccatgtgg acacgaattt ggtgagttcg tcctgtttcc
    17401 aaggtcaatt ccaccaaagt gtagtcacca aaacgctcta aaacctgaaa acgtgtcacc
    17461 gcttctttcc ctttggccgt caccgcttgt ttcttgcggt ctttttcaga acgaccaatc
    17521 ggcgcctcaa ttactccgcg atcgtttggt agattgccgt gtacaatggc ccaatactta
    17581 cgaagggatt tcttatcttt caattcagca gcaagctttg tatgggcatc atcgttttta
    17641 gcaatcatga gcaagccaga tgtatccttg tcaatccgat ggacaatacc tggtcgcaag
    17701 acaccattga tgcctgacaa atcttttaca tgataaagga gagcattaac tagcgttcca
    17761 gacgtgtgac cagccgacgg atgaacgacc atcccttgag gtttatttac aacagcaaca
    17821 tcctcgtcct gaaagacaat ctctaaagga atatcctcag caacatagtc gatttcttct
    17881 acttctggaa tttgataggt taggacatcc ccaacctgca cactatattt agctttttta
    17941 ggctgtccat tgaccaaaac ctgaccagcc ttaatctgct catttgcaac cgaacgagac
    18001 aaatccgtca agtccgacaa tgccttatcc aaacgaatgc caccaatctc aactcttact
    18061 tccattactc tcttctttca taatacaaat aaacaaaatt ccaacaccga cattcagaca
    18121 catatccgcc acattaaaaa ctgggaaact gataaaatcc aagtgaaaca tgtccaccac
    18181 atatcccaat ctaagacgat caataaaatt cccaagagca ccagcaatca tcaaagacag
    18241 actgaataaa gtccagatat tgcccttgat ctgtttgata tagtaccaca ctaggcctgt
    18301 cacagcaaca attgtcatta tcgtgaaaaa ccactgctga ttttgtaaaa tcgaccaggc
    18361 agcaccataa tttcttagat aagctaagct catcaatcct ggtataaatt ccgttaccgt
    18421 atctaattca atattggcaa ctgtccaagc ttttacaaac tggtccaaac caattaattc
    18481 taccatcaaa aatggaaatc caattttacg cattttcatc cttcttctta tcaaaatatg
    18541 cctgcatggt ttcaataaag tctttggcac aagaactaag ttcatcatta gctcgtttaa
    18601 cgtagaccat gcgattgtct acctttcctt tgagaggaat tacggtaatg ccattgacac
    18661 tctcgtcatc aagatagccc gaaccagttg cataggcatc cgtacgctcc aaaattccat
    18721 tcagagtagc acggtctgtc acatcaaaca caaccgagga atccgacgta tcaatcaagt
    18781 tctcggaata ataaagatac gcctcttttt cttgagtgaa ccgtacggta ggtagaccta
    18841 ccaaatctac tggatcaatc tcagctttct ttgtcaaagg atgatcttca cgaaggtaga
    18901 tatgagtctg aaatgcagac aaatctacag cttgcaaatg aagtttatcc aatttctgca
    18961 tgattccttt tgtatttctc tcgttcaaat aaataatacc aagctcgcta taaccttgag
    19021 caacctcatc taaaatctgt actgtagtcg attcaaaaat gcgaaaatga gggtactgcg
    19081 ggtggctacg cgagaactcc gtaatcaacg ggggaagaaa atcataatgc tgacttgaaa
    19141 ttgagaaagt cttctcacct tcctcaggtt gcaaatagag atgctcaaac tgatcaaatc
    19201 ccttaactaa agcctgagct ttctcataga attccatccc tttttgtgtc aaaaaagtcc
    19261 ctgaactagt tcggctaaaa atttgaaaac ctaactcttt ttccaaatca cgaatggaaa
    19321 tggacaaact aggctgggaa acgtacattt tctctgctgc ttcccgaaaa gtaccactgt
    19381 tggcaatggc tacaacgtag cgtaattgtt gaatattcat acctgatacc tcttaaaact
    19441 gcttctacca ttatatcaaa aaaagcaaga atttgctgaa ctcttgcgtt ttcgcaaata
    19501 gactagcccg tcctgttctt caaaactaat ttcttgtata acttccaggt tcccaatttc
    19561 tcttcttcaa ctgcaatttg aaaggctttg gaatttctgt tcgccaaatc atcgatgact
    19621 aattttgcta agttgggacc cataccactt cctctgaaca tttcatctac tactgaacgt
    19681 agaacttata ggcagcgcaa cagtgcagat ggcaaaatat ttttatccta tagagaagat
    19741 attgccgtct taaatcactt ctatcgtaca cttttaaaaa tagcaaaatc aaattacaaa
    19801 aaagactctc cgaaaacaac tcggaaagcc tattgtaaag ccattttcag acttattttg
    19861 cgattgggta aacagatact tgtttcttat cgcgaccttt acgttcgaag cgtacaacgc
    19921 cttctacttt agcgtaaaga gtgtcatctc caccacgacc tacgttagct cctggataga
    19981 tttttgtacc acgttggcgg taaaggattg aaccacctaa tacagtttgg ccgtcagcag
    20041 ctttcgcacc aagacgtttc gcttgtgaat cacgaccgtt tgacgttgaa cctccacctt
    20101 ttttgtgggc cataaattgc aagttagcaa gattcaagtt taacatatgt tattcctccg
    20161 aatttctgta atgattgctt caagctacgc cttaagcgtt gatagcgttg ataacaactt
    20221 ttgtgtaagg ttgacggtga ccttgtttgc ggtggctacc ttttttaggt ttgtacttga
    20281 aggtaacaac ttttttctgt ttaccttgtt tttcaacagt accaacaaca gtagcgcctg
    20341 ctacgagtgg agtacccaca acagttttct caccaccaac aagaactact tcttcgaaag
    20401 taacttcttg acctgcttca acgttcaatt tttcaacgta gatagcttga ccgacttcaa
    20461 ctttaacttg tttgccgcca gttttaatga ttgcatatgt gctcattatg cacctcctat
    20521 gatttttggg ccttgcccga atttgatgtg aagactcgcc tagtaccgtg ggacgaacca
    20581 cttaaacggt attcgtgcgg ttgcacagga tgtgcatagt caacactcct attataacaa
    20641 aaacacctgc aaatgcaagt gttttgtatc atttttctta catttcgaaa acttcgctct
    20701 cctgcttgtt tggtaagaac agagagagga cgattccgac aagagctggt aataaccatg
    20761 ctaatgattg tcctgccaat ggcagagctg agatgatttt tgaaatagca gtccagttga
    20821 attgtcctgc taacacttct accaatgaca aagctgtcac tactcccaca gttaattgca
    20881 taccataagt ggaaagcggt acaaatttgt taacaatggt aatcaagaca atacagatag
    20941 taattggata gagaaccaaa agaactggaa ctgagaaggt gatgatattg ttcaaaccga
    21001 ggttggcaat cccaaagcca atcaaagtaa agatagtcgc atatactttg tagctaaaac
    21061 gtgggaaacg ctcagcgaaa aattcacctg aagaaacaat caagccagcc gttgtcgtaa
    21121 agcaagtaac gataaccatg gcagctaaga aaatttgtgc acctggtcca aaaatagcct
    21181 gtgttgcttg cgaaagaata taaacaccct tattggtatc ggacgccaaa acatcagcag
    21241 gtaccgggaa atgatttcca agaaatgcca aaccgacata tagtgctgag aaagctaaag
    21301 ctacaacaaa accaacagac cagatggttg aaacatattc tttcttgttg gagaaaccaa
    21361 gttgtttcaa ggtattgaca gctaccacac taaaagcaac cgccgcaaga gcatcaaggg
    21421 tattgtatcc ttcaataaat cctgtaccaa atgcctgtcc agctgagtaa gcttccgaag
    21481 ctggtaacgg acttgttgat ccgtacttaa caataccaag cataaccaaa atcacaatca
    21541 aaatagcgaa tactggtgtc aaaatacgac caatactgtt caagatttga gatggattga
    21601 gggcaatcag gtaggctgca acaaagtaga gggctgtaaa accgaacaac caaattccaa
    21661 ggtttgcttc actcaacaat ggcgcaatac caatttcaaa ggacgttgtt gctgtacgcg
    21721 gaatggcaaa gaaaggaccg atagccaaat acaaggcaac aagataaatc gttgcaaaag
    21781 tcggtgaaat cttgcgagaa atctcatgca catatccttt ggggtttaat gtaccgacaa
    21841 tcaaggcaac aacagcaata ccgacacccg atacgacaaa tcctaaaata gctggccaga
    21901 aattctcacc agataagacc cccaaagccg gtggaaaaat caagtttcca gcaccaaaaa
    21961 acataccaaa caggagtaat cctgttagtg ctcctttttt cataataact cctttgtatt
    22021 tttctgaagt cttattatat catacaaatt caatttttcc gaacgattcg aactaaaaaa
    22081 tccagcaata gctggattta aatgtatgcc aaaagaattg aattctacag taagtcttca
    22141 attaaactat ccacttcgtc tttcacttct tctttcggtg tgatttcagt tacgataatc
    22201 ccagccacag ctcgttccac caagccttca acatccattc gagcctcgta ttgctcgaca
    22261 tttttgattt tagggttagt ttttggacgg tcaggggcaa agatggtaca gcaatcttca
    22321 aatggctgga tggaaatatc aaaggtatca atttcttgag caatatcaat gatttccaac
    22381 ttgtccatgg taacgactgg acggataaca ggtgtatttg tcaccgcatt gatagcctgc
    22441 atggattcca aggtctgact tgccacttgt cctagacttt caccattgat aataaccata
    22501 gcaccacgct cttcccgtac tcggtctgta atccgcatca tgaagcggcg tgtcaaggtc
    22561 atcaaataag cttcaggtgc tttttccttg atttcttcct gaatttctgt aaacggcact
    22621 tcgataaagg tgatattacc accaaaggca gtcaatttgc gggtcaaatc atgggctttt
    22681 ttaagtgcac ctgggctagt ataaggcgga cttgcaaagt gaagagcttc aatttcaacc
    22741 ccacgtttca gtgctaaata gcccgcaaca ggcgaatcaa taccacctga taacataagc
    22801 gttccttttc cagatgttcc aactggcaaa ccgcctgctc ccttgatttc ttcatgggaa
    22861 atataagcag catcaggacg aatttccacc cgcaaggtaa tatctggcga cttcatctgt
    22921 acctgtacat ttggaatagc tgtaaaaacc gcatctccaa ggacttggtt aaggtcacgg
    22981 ctgtccaatt caaaattgtg gtcactacga cgtgctgcaa tcttgaaggt catcccttcc
    23041 ttgtaaatgg actgcattat ttccacaact gcttctttca aagctggaac agacttttca
    23101 atcttataag atggtgcgaa attttggatc ccaaaaatct tcttcaaaga agctgaaaca
    23161 tcctgataat ctgccccatt caaatagaca tgaccacggt cacggtcaaa ataaaccgtc
    23221 acttctgggt aaacagaaag gacatgcttg atattgttac gcagtttgtt gacaaaccgc
    23281 atcttgtttt ttcctttagt tgacaattcg ccatagcgaa tcataatttc tgaatagttc
    23341 atgctacctt actttctgtg tgttttgata aatttgtttg aaaattgtga ggaattgttc
    23401 gatttgcccc atatcgttgt catcatccaa gctgatacgg acggcagttt gagccaactt
    23461 ctgcggaaca cccatggcaa tcagagtacc cgcaggctta cctgccttag atgagcaggc
    23521 cgacgtggtc gaaatgtaaa tctggtggtc ttcaaaggca tggacgatga cttcaccacg
    23581 gatattttta atcccgaaag ttacaatact gtgcacaaag tcctctagcc cagaaaaaac
    23641 tgtcacatcg tcgtatttgc ccaattcatc taccagaatc tgcttcatgg ctacaagtcg
    23701 cttctggctg tctgtcgcct tgtccaaggt caagcggagc gccttagccg ttgctgcgat
    23761 acctgccaca ttttcagttg ttgagcgttt atcgctttcc tgtcctcccc ctgtcaatag
    23821 cggagcgatt ttcttgccag ctttgacata gacgaaacct actcctctga cagagtggaa
    23881 tttgtgacct gaaaaactgg caaaatcaac tcggtctgtc aaatatcgtt ccgttggcac
    23941 cttgccgata gcctgcaccg catccacatg gaaggagatg gttggcttat cagctaacag
    24001 ttgagatatt tcctgaatgg gctgaatagc accaatttca ttgttgacgg ccatgataga
    24061 aaccagtatg gtatctggac gaatcaagct ttctaaggct gaaacatcaa caaaaccttg
    24121 ggcattgacc ggagccaaat ccacctcaaa accttgcgtt ttgagccaaa gtgcagactc
    24181 ttttaccgct ggatgctcaa tagctgacac gatgatgtgc ttgcccagat gtgccttttc
    24241 aaatgctact cccttgatga cccagttgtc accttccgta ccacctgagg tgaaaaagat
    24301 ttctttgcta tccttgccta gtaattctgc gatttgcttg cgagatgctt ccaaaatacg
    24361 ggttgcctga ctgcctagac tatggaggct agaggggttt ccccagattt ttgtcgccac
    24421 ttccgtatag gtcttgagaa cttctggata gacctgtgtc gttgccgcat tatcaaaata
    24481 aatcattttt tatattcctt ttattgcaat agtcctattt tatcatgttt tcatgccttt
    24541 cggcaatctt taagatagtt ttaaacttgg ttttttatga tgaacttgga ggatagcaca
    24601 tgagatcaac aaaaagaaaa gaacacgttt ctgccttaac aaaactacaa aaatttttga
    24661 cctttatagg ttcgatttta ggaattatta ctgcttgtat taccatttat accttcactg
    24721 caaaatcaac tgttgcccat actaacccta gtagctcgat aagctcatct agttctacta
    24781 acactaaaac atcttcagca gttagcccaa ccatcaatat acaagcatca acaagttcta
    24841 gtactgaaac gacagctcct agccaaaccg aaactagctc tacagtagat tacagcagtt
    24901 catcaacaac tacagaaact tcatctagtc aagaaatcca aacaagtata acagaaacaa
    24961 cgagtagtac agaaaactct actgaagcat ccacaagttc ttcccaagaa taaccagata
    25021 aatatttgca caactgctct tggtttgata tactaaatct aggaggtgct gtatgaaata
    25081 ttttattctt agaataccta ttttagtttg gttattgtta ttttcattca ttgaaatctt
    25141 cctgctagca tcatttttac cagaaccgtt taacaccaat tctcttcttc ccatagttat
    25201 cttatctagc tgtgcagtta gagtatcgaa tgaagtcaaa gaaagagatg gacaatacac
    25261 tccattcaaa cagttatggt gggcggtact tgcttggatt atcttgggta tccttttcgg
    25321 attgactgtc caggcacccc tatcaaaaca ccttgtcttt atcatcaaag ctattttagg
    25381 aggaataggc taccgcctta ttgaacgcta taccgtctat cgctatcact atttacagac
    25441 gaaaaagaaa ggttgaccct ttctttttta gttttctaaa gtatttttct taattcatca
    25501 atatcttctt ggctagttga ccagctggtc gcaaagcgga tgatactgtg gctatcgtcg
    25561 tatttctccc agaagccata ggcaattcca gcttctgtca atctagccaa ttcttcattc
    25621 ttaacaataa caaattgctg attggtcggt gatttgagat agaattgaaa gcctttctct
    25681 tccaaaatct ggatcagttg ctctgccatt gcgatagcat gacgccccaa ttcaagatac
    25741 aagtcatcag taaataagca atcaaactgg actcctgtca ctcttccttt cgccaacaat
    25801 gcaccatggt gtttgacgat cgatacgaaa ttcttaggct ggttgttctt tgtaaatacc
    25861 aaagcttccc ccatcaaggc accgagtttt gtaccaccaa tgtagaaaac atctgtcagc
    25921 tctgcaattg tcttcaaatc aagatccgtt tcacgagcag caagaccata acccaaacga
    25981 gctccatcta aaaaaagcgg gatgttgtga taacgacaaa ctgttgacaa ggcttctagc
    26041 tctgttttgc tataaagtgt accatattca gtcgggtggg aaatataaac cattcctgga
    26101 tgaaccatat gagcatggtt agcatcagca tagaaatctt tgatgaagtt atcaacccca
    26161 cttgccgtta ttttcccttc atgatgcggc agtgtcaaca ccttgtgtcc agaaaattca
    26221 atggcaccag cctcatgtgt agaaatatga ccagtatccg ctgcaatgac tccttcatag
    26281 gaagctaaca tagacgaaat gacaatttga ttggtctgcg tgccacctgc taaaaacgta
    26341 acttgtgcat gaggacagtc cgtagcaagt ctgatttttt cgatagcaga ttcagtatat
    26401 ttatcagtgc catatccaga taaaccttct tggttgctag caaccaaagc ttcaagcagg
    26461 actggatggg cacctttgtt atagtcattt tcaaaatgta acatctcaca acctccgtaa
    26521 aatataaaat aaaaaagcct gttaatgcag gcttttcact ttagtccgtc ctgagggaat
    26581 cgaaccccca tctcaagaac cggaatctta cgtgatatcc attacactaa ggacggaaag
    26641 gaaaaacttg cactaggcaa gtttttatat gaattacaat tcaatgtcac cgaaaaggtc
    26701 agccattgag aatccagatt gagtttctgg caattcgtaa tcacgttttt cttcacgttt
    26761 ttgacgacgt ggacgtggag cacgtttttc agctttttct tcgccttcag cagctgctgg
    26821 acgctcttcc aaagctttga tagaaagtga tacacgctca tcagcagcat tcacttcaag
    26881 aactttaaca gttacttctt gacctactga caaagcatct tttggatttt caacacgttt
    26941 gtgtgaaatt tgtgaaatgt gtaccaaacc atcgatacct ggcaatactt caacaaacgc
    27001 accgaagtca gtcaagcgtt ttactttacc ttcgatcaca tcgccagctg ccaatttttg
    27061 ctcaacgcca tcccatgggc caggctgtgt agctttcaat gacaatgata cgcgaccttc
    27121 aacttcgtcg attgcaagaa ctttaacttc aacttcttca ccaactgtta cagctgattt
    27181 aggagatacg ttacgctcgt gtgacaattc agtcaagtgt accaaaccat ctacaccacc
    27241 aaggtcgatg aaagcaccga agcttgtgat acgtgcaact ttaccagtta caacttcacc
    27301 aactgccaat ttaccgaata cttcagcacg tgcagctgca gcttctgctt caacaacgtc
    27361 acgacgtgac aagatgaaac ggttctcagc aggatcaact tctttgattt tagcatcaaa
    27421 ttcttgacct acaaaacgct cagtgttacg agtgaaacgg ctgtcgatca ttgaagctgg
    27481 gatgaaacca cgaagaccct caaattcaac tgcaagacca cctttaacgg cacgagttac
    27541 tttaactgta acaacttctt cttcacgacc aacaagcttg tcccatgctt tacgtgcttc
    27601 caaacgtttt ttagatacaa gataagtaac agtgtctgta tctttaccaa caacttggcg
    27661 aagtactaac aattcaagtg tttcaccaac ttttacaagg tcgttgatat cagcatcacg
    27721 gtcgttagtc aactcacgaa gagtcaatac gccttcaaca ccagtacctg agatagctac
    27781 gtttgcttga ccagcatcaa ctgtcaatac ttctgcagtt accacatcgc caggtgtaac
    27841 ttcgcttaca ctgttcaaca aatcttcaaa ttcgttcatt ataaaaaaac ctccgacaat
    27901 caggtctttc gacccaacat aaaatatatt ttatttaagg cacacgcaag gacaacaaca
    27961 attagacatc tttgacgaac tagactatat ctagtacctt tactggggta gctggattcg
    28021 aaccaacgca tgagggagtc aaagtccctt gccttaccgc ttggcgatac cccaatatac
    28081 accactaaga taacgttctg aaatgaactc gggctaaacg ctgtgtaaaa aagataagtt
    28141 gcctggcaaa tcaagatttg ctgtcaactt cctattttta ctgtgcgttt gacgccctta
    28201 gtatcttaga tatggagaga gagggattcg aacccccgaa cccgaaggag cggatttaca
    28261 gtccgctgcg tttagcctct tcgctatctc tccgtacact aacagtcact attctaacat
    28321 aaaatagcga ctattacaag ccttttagtg acttaaatta taattttcaa taatattttc
    28381 gactgctttt tctaattttt tgtaaaagct ttcggtgttt ccatttttta taactgcaaa
    28441 gttattttca gccaattctg caatttctcc aattactttt ttacctataa caaggcggta
    28501 gccagggaac tcttctctat tgacaagaac tttgctatct tcaatctgaa tttcaatttt
    28561 tttatctttt ttactcattt tcaaacctca ctttcactat tctacaaaaa aagagaagag
    28621 cttgcaagtg caagccctct gaaattaatc tacttcgaca atccagcctt caggagcttc
    28681 aatatcacca aactggatac ctgttaattc ttcatacaat ttacgagtga caggtcctac
    28741 ttctgtttca ctatggaaaa tatggagttt gtctgcaatc tggataccac caattggtga
    28801 gatgactgca gctgttccgc aggctcctgc ttcgacaaac tgatctaatt cttcgacaag
    28861 gacttcacgt tccactgcct tcatccccag acgatgctct gccaaataca agagagaata
    28921 cttggtaatg gacggcaaga ttgatggtga aatcggtgtg acaaactcgt tattggctgt
    28981 aatcccaaag aagttagcag accctacttc ttcaatcttg gtgtgggtag ctgggtctag
    29041 gtaaatcaca tctgagaagc cctgcttttt ggcatattga cccggtaaga gcgatgctgc
    29101 gtagttaccg ccgaccttgg ctgccccagt tccgttaggt gctgcacggt cgtacttgtc
    29161 ttggatgagg aagttggtcg gagccaggcc gcccttgaaa tagttgccaa ctggcatggc
    29221 gaaaacggtg aaaatatact cttccgcagg tttgacgccg atgatgtcgc cgacgccgat
    29281 gaggagcggg cggagataga gggtgccacc agttccatag ggaggaacgt agtctgcatt
    29341 ggctttgacc acttctttac aagccttgat gaaaagatca gtcggtacag gctccatgag
    29401 caagcggtca gctgtccgtt gcaggcgctc agcgttttgg tctggacgaa agagctggag
    29461 ttttccctcc ttggtacgat aggctttaag gccctcaaag gcctgctgcc catagtgaag
    29521 ggctggtgag ctttctgaaa tgtgcagttc cgcatcttcg gtcaattgcc cctcagacca
    29581 ctggccgttt ttgaaatgag cgatgaagcg ataaggtagt ttcatataag aaaaaccaag
    29641 gttttcccag tcaatgttca ctgtcatata gtttctccaa attcattttt tattatttta
    29701 ctacttttga aagtgatttt caattaaaaa ttcagaaaat tttgtgaata taagaaaaag
    29761 cctggtaaac cagactctta ctctttaaaa acaaattcta gttgaatttc aggtgagata
    29821 gcactgaata aattttgata gtaggttttg gctgactctt ttatgtcctc ctgataatct
    29881 gctagaaacg tttcttgttc tgctgactga aattcatctg tgataagttg ggcagtatcg
    29941 atctcttctg tcgcaaaact cagtatctca ccactcttat catataaggt ataaggttct
    30001 tctgcatcta attccaatcc aatgacttca aaggctggaa gggtaatttt gtaccgattt
    30061 tcagaaagat gttcaataga tacaggactt ttgataccaa attttgcctt gtacttgata
    30121 attaagaggg ctgatttctc tgagaagggc atttcttgac caaataagac cgtgtagttt
    30181 ttagcagtca caattttctg gacagctgta tttagaaata ccaattcatt gacttgctcg
    30241 acagactcaa tagccgtatg gacactcact tcctgctgat tactcttttc accagagatg
    30301 taaccgtatc cccatacacc acacaataac agaaggaagg acagaacaag ccatagatag
    30361 acttttatac tgaaaaataa tttgataatt ttcataatat ttacctcctc tacagtatag
    30421 caaaaagccc tgacccactt ctcag
//
LOCUS       DASFQD010000010        30049 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.010, whole genome shotgun sequence.
ACCESSION   DASFQD010000010 DASFQD010000000
VERSION     DASFQD010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 30049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30049
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.010"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..5369
                     /locus_tag="U1021_000356"
     CDS             <1..5369
                     /locus_tag="U1021_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003084104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEM4710947.1"
                     /translation="PPQDITFREEGGIVIASLEEDLSQLDLRTGQTEHLSAYEHLNLS
                     QKFEILSHFDQVRNSRPKLPNLRRGEFDHEMEMTPIYADNELLTYLEANGTIYDLQRP
                     LTPQQEVILTEMSQTILGENTEKLTRLGIDLADVDEQQRGILIDAAGRFHLNNADLAL
                     LGGYPKATVTQLALATELLQMGLTHDKAEFFLTSQLDLEEARPIAYAFLHEDLTLEEV
                     RTFERDKLSQPDLSFREWREHISQTKPEIMTQSLPQNPIVEEALKRYPIASIVTYKGQ
                     EFQVMAIEDSGVNNLIRIELQNDFTDVIEQNPVLFLRTLEDITQALHVPSVEEKEEME
                     ETQQEFDLFSFMDMEESQEPVSQMTASVPSNKGEAKQEEALSEDELEPKVIKTPPATD
                     FHFPEDLTDFYPKTTRDKVETNVAAVRLVKSLESEHRQATPSEQELLAKYVGWGGLAN
                     EFFDEYNPKFSKERGALKTLVTDKEYSDMKLSSLTAYYTDPHLIRQMWEKLERDGFTG
                     GKILDPSMGTGNFFAAMPKHLRENSKLYGVELDTITGTIAKHLHPNSHIEVKGFETIV
                     FNDNSFDLVLSNVPFANIRIADSRYDKPYMIHDYFVKKSLDLVHDGGQVAIISSTGTM
                     DKRTENILQDIREMTDFLGGVRLPDNAFKAIAGTNVTTDMLFFQKHMDKGYVADDLAF
                     SGSIRYDKDDRIWLNPYFDGDYNSQVLGSYEVRNFNGGTLSVKGTSDNLIEAVQTALK
                     QVKAPRSVDPSDILITPDVMRRQVIDTSVPPEIRESLDQYSFGYKDSTVYYRDHKGIR
                     VGTKTEEISYYVDEEGTFKAWDTKYSQKQIDRFNALEVTDSTALDVYVTEEAAKRGQF
                     KGYFKKTVFYEAPLSEKEVARIKGMVDIRNAYQEVIAIQRYYNYDKDEFNHLLGHLNR
                     TYDSFVKRFGYLNSAVNRNLFDSDDKYSLLASLEDECLDSSGKTVSYTKSLAFEKALV
                     RPEKEVTAVSSALDALNSSLADGRGVDLDYMMSIYQTDSKASLIEELGDAIIPDPERY
                     LNDREVVYESRKDFLSGDVMTKLEVVDLLIKEDNSDFPWQHYQNLLEDVKPPRVTLAD
                     IDYRIGSRWIPLAVYGKFAQETFMGQTFDLTDQEVSTVLEVSPIDGTMSYQSKFAFRY
                     STATDRSLGVPGSRYDSGRKIFENLLNSNQPTITKQVEDGDKKKHVTDVEKTTVLRAK
                     ETELQELFQDFVASYPEVQQMIEETYNSLYNRTVSKVYDGSHLTIDGLAQNISLRPHQ
                     KNAIQRIVEEKRALLAHEVGSGKTLTMLGAGFKLKELGMVHKPLYVVPSSLTAQFGQE
                     IMKFFPTKNVYVTTKKDFAKAKRKQFVSRIITGDYDAIVIGDSQFEKIPMSQEKQVTY
                     IQDKLNQLREIKQGSDSDYTVKEAERSIKGLEHQLEELQKLERDTFIEFENLGIDFLF
                     VDEAHHFKNIRPITGLGNVAGITNTTSKKNVDMEMKVRQVQGEHDYRNVVFATGTPVS
                     NSISELYTMMSYIQPDVLERYQVSNFDSWVGAFGNIENAMELAPTGDKYQPKKRFKKF
                     VNLPELMRIYKETADIQTSDMLDLPVPEAKVIAVESELTEAQKYYLEELVDRSDAIKS
                     GSVDPSVDNMLKITGEARKLAIDMRLIDPAYTLSDNQKILQVVDNVERIYREGENEKA
                     TQMIFSDIGTPKSKEEGFDVYNELKDLLVDRGIPKEAIAFVHDANTDDKKNSLSRKVN
                     SGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDVGRILRTFKIKKNVEVTDNG
                     KDNF"
     gene            5350..5719
                     /locus_tag="U1021_000357"
                     /pseudo
     CDS             5350..5719
                     /locus_tag="U1021_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001129922.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TnpV protein"
     gene            6086..8005
                     /gene="tet(O)"
                     /locus_tag="U1021_000358"
     CDS             6086..8005
                     /gene="tet(O)"
                     /locus_tag="U1021_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032490535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance ribosomal protection
                     protein Tet(O)"
                     /protein_id="HEM4710948.1"
                     /translation="MKIINLGILAHVDAGKTTLTESLLYTSGAIAEPGSVDKGTTRTD
                     TMNLERQRGITIQTAVTSFQWEDVKVNIIDTPGHMDFLAEVYRSLSVLDGAVLLVSAK
                     DGIQAQTRILFHALQTMKIPTIFFINKIDQEGIDLPMVYQEMKAKLSSEIIVKQKVGQ
                     HPHINVTDNDDMEQWDAVIMGNDELLEKYMSGKPFKMSELEQEENRRFQNGTLFPVYH
                     GSAKNNLGIRQLIEVIASKFYSSTPEGQSELCGQVFKIEYSEKRRRFVYVRIYSGTLH
                     LRDVIKISEKEKIKITEMCVPTNGELYSSDTACSGDIVILPNDVLQLNSILGNEMLLP
                     QRKFIENPLPMLQTTIAVKKSEQREILLGALTEISDGDPLLKYYVDTTTHEIILSFLG
                     NVQMEVICAILEEKYHVEAEIKEPTVIYMERPLRKAEYTIHIEVPPNPFWASVGLSIE
                     PLPIGSGVQYESRVSLGYLNQSFQNAVMEGVLYGCEQGLYGWKVTDCKICFEYGLYYS
                     PVSTPADFRLLSPIVLEQALKKAGTELLEPYLHFEIYAPQEYLSRAYHDAPRYCADIV
                     STQIKNDEVILKGEIPARCIQEYRNDLTYFTNGQGVCLTELKGYQPAIGKFICQPRRP
                     NSRIDKVRHMFHKLA"
     gene            8057..8230
                     /locus_tag="U1021_000359"
     CDS             8057..8230
                     /locus_tag="U1021_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine-rich KTR domain-containing protein"
                     /protein_id="HEM4710949.1"
                     /translation="MMKCEWILCPVCGSKTRNKIRKDTVLENYPLYCPKCRQERLIKV
                     DNLKITVIKEPDA"
     gene            8718..9230
                     /locus_tag="U1021_000360"
     CDS             8718..9230
                     /locus_tag="U1021_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007392094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEM4710950.1"
                     /translation="MVKYAPRKVYIRESGGYVELSYTEFCRCRESDQTYMDKLFIPIQ
                     GCLLEVVREQYTDFYRDKERWRYLQKLDTKNRLLSLDGFTDSEGNPLDFITDEAVDIA
                     ETVVNAVMVDRLKAALPLLSDSEQELIQAIFFDGLSEREVGARLGITQSVVNKRKARI
                     LIKLRKIIEN"
     gene            9325..9750
                     /locus_tag="U1021_000361"
     CDS             9325..9750
                     /locus_tag="U1021_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000323896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEM4710951.1"
                     /translation="MAYNHGREDRKWRIWKEAEEKLLRECGVDEATIEQIRMADRADF
                     NSNRRFYRWTNDVAEYLEDMAGRERQAEVGTVAELLEEIESENLYQVLVTVDGRTLKI
                     VLLKMQGYSTKEIAPLVHLTTGAIYARLDHLRKKLRKIL"
     gene            9834..10308
                     /locus_tag="U1021_000362"
                     /pseudo
     CDS             9834..10308
                     /locus_tag="U1021_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000331637.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
     gene            10463..11488
                     /locus_tag="U1021_000363"
     CDS             10463..11488
                     /locus_tag="U1021_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015521636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM4710952.1"
                     /translation="MQKLQTVNAETLLYEPLEKPSFVVDSLIPTGLSLFCGSQKIGKS
                     WLMLKLCLCVSQGIPLWDMPTMEGDVLYLCLEDTFCRIQDRLFRLTDEASGRLHFAVA
                     SCKLSDGLIVQLEDYLKDYPDSRLIVIDTLQKVRTASKDNAYASDYGDISLIKDFADR
                     HSLAVIVVHHIRKQNDSDVFNKVSGTTGLTGSADATFVLEKEKRASDTAKLYVTGRDT
                     PYQEYTLRFRDCRWELVERKTQEQLAKETIPDVLFRLVDFMRDKEEWIGTATELLAAM
                     GETETIPTVITKWLNEYRTTFLSENRICYQYSRRKDGRRIALARRAGDSGDGGDSDIR
                     IPPCYCH"
     gene            12013..12978
                     /locus_tag="U1021_000364"
     CDS             12013..12978
                     /locus_tag="U1021_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002569195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination protein"
                     /protein_id="HEM4710953.1"
                     /translation="MPYAILRFQKRKAGGVAACERHNERKKEAYKSNPDIDMERSKNN
                     YHLIAPPKYTYKKEINRMVAEAGCRTRKDSVMMVETLITASPEFMNQLPPEEQKAYFQ
                     TALDFISERVGKQNILSAVVHMDERTPHMHLCFVPITPDNKLSAKAILGNQKSLSEWQ
                     TAYHERMSSRWNQLERGQSSMETKRKHVPTWLYKLGGRLDKQYEEIVSALSDINAFNA
                     GKKRDKALDLLSAWLPDVEKFSKEIGKQQAYIDSLKERIGQESDYAGRMRDEKYEQEL
                     KVQKANQKIFELQRTNEQMGRLLSKIPPEVLEELQKNHRSRAKER"
     gene            12987..13841
                     /locus_tag="U1021_000365"
     CDS             12987..13841
                     /locus_tag="U1021_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002596257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEM4710954.1"
                     /translation="MKKQDFKVLKTKDLYPFPDNPFHVAEDETLSELAESIKEFGIVT
                     PIITRPKEDGDGYEVIAGQRRVRASELAGINTVPAFVLPLDRDRAIITLVDSNLQREN
                     ILPSERAFAYKMKSEAMKRQGFRTDLTSSQVVTKLRTDDKVAQGFGVGRMTVQRFIRL
                     TELIPPILQMVDEGKIALTPAVELSFLKKDEQENLFATMESEEATPSLSQAQRMKQLS
                     QSGRLDMDTIFAIMTEEKGNQKETLKINTSKLKKYFPKNTTPKQMEETIIKLLERELQ
                     RKRNRDSR"
     gene            13887..14117
                     /locus_tag="U1021_000366"
     CDS             13887..14117
                     /locus_tag="U1021_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001206986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710955.1"
                     /translation="MREIQYEIVKEIAVLSTGDSGYTKEINLISWNGKEPKYDIRSFS
                     PNREKCGKGITLNADEAAALLKALQKELNSED"
     gene            14117..14380
                     /locus_tag="U1021_000367"
     CDS             14117..14380
                     /locus_tag="U1021_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000253176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage II sporulation protein R"
                     /protein_id="HEM4710956.1"
                     /translation="MVSDWQGGDISKLFPALSGKEDLSMGEDKKADKKRKRIVPKAPV
                     QMIISREYVGTQTVTEAFVPIISEDIRKKIAEGDTFDNEGLSA"
     gene            14435..14611
                     /locus_tag="U1021_000368"
     CDS             14435..14611
                     /locus_tag="U1021_000368"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase"
                     /protein_id="HEM4710957.1"
                     /translation="MAGIKEEKKIYLVGIYCRLSKDDGTDNESASIATQKSILTDYVK
                     KQGWHIAKTYKSPL"
     gene            complement(14625..14909)
                     /locus_tag="U1021_000369"
     CDS             complement(14625..14909)
                     /locus_tag="U1021_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002326770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HEM4710958.1"
                     /translation="MPTKRSGPLVGKCPKCGNNIVLKKSFYGCSNYPECTFTLAEHFR
                     KKKLTKTNVKELLEGKETLVKGIKTKDRKSYNAVVKIGEKGYIDFISFSK"
     gene            complement(15055..15792)
                     /gene="erm(B)"
                     /locus_tag="U1021_000370"
     CDS             complement(15055..15792)
                     /gene="erm(B)"
                     /locus_tag="U1021_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011018369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2058)-N(6))-methyltransferase
                     Erm(B)"
                     /protein_id="HEM4710959.1"
                     /translation="MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLT
                     TKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGNIP
                     YHLSTQIIKKVVFESHASDIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAE
                     CFHPKPKVNSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHA
                     KVNNLSTVTYEQVLSIFNSYLLFNGRK"
     gene            complement(15830..15985)
                     /locus_tag="U1021_000371"
                     /pseudo
     CDS             complement(15830..15985)
                     /locus_tag="U1021_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002333002.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
     gene            complement(16002..16211)
                     /locus_tag="U1021_000372"
     CDS             complement(16002..16211)
                     /locus_tag="U1021_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000527318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-binding protein"
                     /protein_id="HEM4710960.1"
                     /translation="MGNLGAQKAKRNDTPISAKKDIMGDKTVRVRADLHHIIKIETAK
                     NGGNVKEVMDKALEEYIRKYLPDKL"
     gene            complement(16309..17205)
                     /locus_tag="U1021_000373"
                     /pseudo
     CDS             complement(16309..17205)
                     /locus_tag="U1021_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002355409.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
     gene            17277..19001
                     /locus_tag="U1021_000374"
                     /pseudo
     CDS             17277..19001
                     /locus_tag="U1021_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003084608.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            19118..19927
                     /locus_tag="U1021_000375"
                     /pseudo
     CDS             19118..19927
                     /locus_tag="U1021_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017646980.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helicase SNF2"
     gene            19997..20296
                     /locus_tag="U1021_000376"
     CDS             19997..20296
                     /locus_tag="U1021_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000194854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710961.1"
                     /translation="MTQTVEDIRYQLEEWLAQGFTSSEDRANYQALKEQYEDETLDYS
                     FSKREIIGQLEVIITTRENDFPDLDEVTKEEYLELVEQLDNLDKGQADYYRKQLA"
     gene            20311..20601
                     /locus_tag="U1021_000377"
     CDS             20311..20601
                     /locus_tag="U1021_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006738782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710962.1"
                     /translation="MIEQIIQSLFIIAVTGLILLVLYQIAKMLGSLFVIGLIGFLAFT
                     EVYGIYLFFTERYLYVEDLATNGIFSFTTFYIIFNLLLVFGLVRKVVRSRMA"
     gene            20712..21350
                     /locus_tag="U1021_000378"
     CDS             20712..21350
                     /locus_tag="U1021_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017771980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEM4710963.1"
                     /translation="MLNKMKARLLIGLGGLAVTSFMVMMGYTIGSQSVTNHTQKQIQS
                     EAQKLLTKEKEKEKASVLSDELVKEFLTQYYTKEKLGENNNRIKPYMTDSAFKEEVAR
                     QEDSINQIYKDYMLDYRFESANIYVNTEANEAFAEVSYQVVYVSEVSDKAQKSTQTET
                     RTLKLSYAKMSDKLLVNQVTIWNGKLEDLKESSDGSDSSIPKIQGTTTSETN"
     gene            21390..22478
                     /locus_tag="U1021_000379"
     CDS             21390..22478
                     /locus_tag="U1021_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006739884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEM4710964.1"
                     /translation="MTRIEKVKQKAILEVAESLGYSFKRLSGQVYEHPEHDSFRIFAD
                     TNTFKWFSRDVQGDVIDFVQLMTGVSFKKALSYLETGDFEQAKIVEETYQPFRYYLRE
                     EPFDQARIYLNDIRGLSDDTINAFGRQGLLAQAHYQTKTFQESVLVFKSYNHQGQLEG
                     ASLQGLVKNAQRHDRDYLKKIMKGSHGYVGMSFDIGKPKRLIFCESVIDMMSYYQFHQ
                     KQLSDVRLVSMEGLKLSVIAYQTLRLTAEEHDKLNFLDNIKPSKLTYFLRIIQETTVF
                     FQNHPGLITLAVDNDEAGRGFCQKLSEKGLPIETDLPPLQELETKADWNDIVKYQNNY
                     SLKDVIQSAKLQVIRNNPPPRKNTALEL"
     gene            22532..22759
                     /locus_tag="U1021_000380"
     CDS             22532..22759
                     /locus_tag="U1021_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000110925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710965.1"
                     /translation="MSVIERLAERVARQEEKVAKETEKLETYRSQLQTAMYQAFIKRQ
                     QNSPWTFDEALTQAFGQDEQKLKPSDNRNEE"
     gene            22763..23158
                     /locus_tag="U1021_000381"
     CDS             22763..23158
                     /locus_tag="U1021_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000048064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HEM4710966.1"
                     /translation="MTKDWTFDQPLDDNTPTSSSEERAKIAALFHKENQEGTEDVDYV
                     AAFEMEQQKSKNQMAPQQKPQEQSTPKEVSSSTITNDYKQHLADVMAQNNEDIRQSQK
                     KIEELHQLIDDKNKQNKKLQAISVAIDDL"
     gene            23203..23487
                     /locus_tag="U1021_000382"
     CDS             23203..23487
                     /locus_tag="U1021_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006738783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710967.1"
                     /translation="MKLFKKQTHNQDSFKRLIHRLSGMSEADLHKVNQLLDVVFDSTS
                     QTTNDVKAPKDLQKEPTLDETITEAKNKLKTEQLEKRIEQFSQAKKPKSE"
     gene            23557..24033
                     /locus_tag="U1021_000383"
     CDS             23557..24033
                     /locus_tag="U1021_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013851913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4710968.1"
                     /translation="MIGDNIKSLRKTHDLTQPEFAKIVGISRNSLSRYENGTSSLSTE
                     LIDRICQKFNVSYVDIVGEEKMLTPVEDYQLTLKIEVIKERGAAILSELYRYQDSQGI
                     TFDDETSPWILMSDDLSDLINTKIYLVNTFDEVERYNGYLDGIERMLELANHQVVA"
     gene            24033..24800
                     /locus_tag="U1021_000384"
     CDS             24033..24800
                     /locus_tag="U1021_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003004890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zeta toxin family protein"
                     /protein_id="HEM4710969.1"
                     /translation="MRLEEFSKDDFDLALKRTIRSLTRGKTTSVTPKAILLGGQSGAG
                     KTTIHRIKQKEFQGNIIIIDGDSYRSLHPNYLTLQEEYGKDSVDYTKGFAGKMVEQLV
                     DELSKQGYHLLIEGTLRTTEVPRKTARLLKARGYQVSLALIATKPELSYLSTLIRYEE
                     VYAVKPSQARATPKEHHDGIVEHLVDNLRELETDKLFDQIQIYQRDRTCVYDSEMDDG
                     PAAEVLLECLFGKWNKVEEEMLRDVEEKIANLKVSNE"
     gene            24816..25604
                     /locus_tag="U1021_000385"
     CDS             24816..25604
                     /locus_tag="U1021_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013851911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710970.1"
                     /translation="MTTIKKVIYFDESTAMDFLQIESKGKLTKTTELMSTLEGGADAQ
                     IIGEVSLGKNSALKTIFEKMAGLSGTASISSSGSGAIQGNKIAKTILENSLLYDFLDT
                     VELRKKNYLVDITENYTLEISENSMSYFAMIAPISEMMEGSQSIDGLENVSMSFSKLN
                     SGIREIKGYFELLGYNKAHEIERIFRFNINSFKNNYRIHDLTKMTLKLYSIKVGETTI
                     SDLDFESQFSLRRNHLSFSALSEDGNVDKSMKYPVYDVILAGVN"
     gene            25605..26747
                     /locus_tag="U1021_000386"
     CDS             25605..26747
                     /locus_tag="U1021_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013851910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEM4710971.1"
                     /translation="MDSILLFKGSKRDFDKLLDSKEIEDYTPFMELIRQYNITVRAND
                     VNASQYIADGFGKEHIENVVIYADDYASVTDHVISNFNNIVLLGHDIQNLYIQNPPKR
                     VESSLRVQFEGIIEERYSHYKEIAKEEVIDLYNHMLASNVVGQQRAKKDVSIGLLKKN
                     TLTNNSPLVMLFYGSSGVGKTELAKTMSEYFNGKLTRIQFSMMQTEEAYKYIFGDAHS
                     KGSLAKDLLSRETNIVLIDEFDKVNSSLYNVFYQMFDEGELEDINYSVDVSNCVFILT
                     TNFNNDKEMAEKLGLPIFSRIDLKIEFQNLTDSELLHIIDNIFENVISRLSEEEKNII
                     ENSGLRETYRKHVGSFENIRMLKSFIEKDIFQIIFEELLRKNSSLT"
     gene            27090..27449
                     /locus_tag="U1021_000387"
     CDS             27090..27449
                     /locus_tag="U1021_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4710972.1"
                     /translation="MGQEIKLIRKQFRITRQEEKQIKEMMREQKLDSFSEFLRQNLLK
                     KNYQDRIFESWFSLWQSQKFEQISRDVHEVLVVARENHQVTQEHVSILLTCVQELIAE
                     VNQVQPLSRRFREKYMR"
     gene            27459..27824
                     /locus_tag="U1021_000388"
     CDS             27459..27824
                     /locus_tag="U1021_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000263054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="HEM4710973.1"
                     /translation="MVYRYRTNLKKVFLTDSELHQLNERIDKSHCQNFSVYARKVLLN
                     PNMSFVTINTDTYDQLVFELRRIGNNINQIARAINQSHLISQEQLQELSKGVSELITG
                     VEKEFQVEVKRLREFHGSH"
     gene            27811..29673
                     /locus_tag="U1021_000389"
     CDS             27811..29673
                     /locus_tag="U1021_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HEM4710974.1"
                     /translation="MVVTKHFATHGKKYRRRLIKYILNPGKTDNLKLVSDFGMSNYLD
                     FPSYEEMVEMYNVNFTNNDKLYESRNNRQEKHQQNIHAHHLIQSFSPEDNLTPEEINR
                     IGYDTMMELTGGRFKFIVATHTDKDHVHNHILINAIDRNSDKKLIWNYALERNLRMIS
                     DRISKIAGAKIIEKRFSYRDYQKYRQSSHKFELKQRLYFLMQHSKSFDDFLEKAVQLH
                     VHIDFSQKHSRFMMTDRAMTKPIRGRQLSKRDLYDEEFFRTYFAKQEIESRLEFLLGR
                     VNSLEALLTKAKELNLTIDLKQKNVVFTLEENGKQISLSHKKISEKKLYDAAFFQNYF
                     EDKELVSSEVVESLREQYHAFQEERDKEKVATEDIEEAFEEFKKKRDAVHEFEAELAE
                     HQIEKLVDEGIYIKVSFGIKQSGLVFIPNYQLDIIEEDNQKKYKVYIRETTSYFVYNQ
                     EYSDKNQYIKGQTLIRQLTNDSRKIPYRRPTIEKLQEKISEINFLIELTETDKKYQDI
                     KDELVAGIAELDIVLNQTNEKIATLNKMAEVLINLKSDDPSSRKLARYEFSKLNLTEL
                     ITLEQVTEEIRVLQEELGHYLDEYEGLVKKLEMFVKVLNDKDFDKKFSIEILLE"
     gene            complement(29717..>30049)
                     /locus_tag="U1021_000390"
     CDS             complement(29717..>30049)
                     /locus_tag="U1021_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000837481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rgg/GadR/MutR family transcriptional regulator"
                     /protein_id="HEM4710975.1"
                     /translation="MLKNYVYSTLNKTNKRLVTQLAINCLIVSIDKEEFQNCNFLIKE
                     VKKLLNNELNYYEQTVFLYTCGYFEFKCNPANGIEKMKKALQVFEILGEHNIKAQYQE
                     HYDKYINQ"
BASE COUNT         9679 a         5499 c         6659 g         8212 t
ORIGIN      
        1 aacctcctca agacatcacc tttcgtgaag aaggggggat cgtcattgca agtcttgagg
       61 aagatttatc acaactagat ttacgaacag ggcaaacaga acatttatcg gcttatgaac
      121 atctaaactt gtcccaaaaa tttgagatat taagtcactt tgaccaagtg cgaaatagcc
      181 gtccaaagct accaaacctg agacgtgggg agtttgatca tgagatggaa atgacgccaa
      241 tctatgcgga caatgagcta ttaacctatt tagaagctaa tgggaccatc tatgacttac
      301 aacgtccttt aacacctcaa caagaagtga tcttaactga aatgagtcaa accattttgg
      361 gtgaaaatac cgaaaaactg actcgtttag gaatagactt agctgacgtt gacgagcaac
      421 aacgtgggat actgatagat gctgcagggc gttttcattt gaataatgcc gacctagcct
      481 tattaggggg ctatcctaag gcaaccgtca ctcaattagc ccttgcgaca gaattgcttc
      541 agatgggatt aacgcatgac aaggcagaat ttttcttgac cagtcagcta gacttagaag
      601 aagcaagacc cattgcctac gccttcttgc atgaagacct tactcttgaa gaagttagaa
      661 cctttgaaag ggacaaactg tcccaacctg acctatcctt tagggaatgg cgagaacaca
      721 tctcacaaac aaaacctgaa atcatgactc aatcactccc tcaaaatcct atcgtagagg
      781 aagcccttaa acgctatccg attgcttcga ttgtgactta taaggggcaa gagtttcagg
      841 taatggccat tgaggactca ggcgttaata acctgattcg gattgaatta caaaatgatt
      901 tcacagatgt gattgaacaa aatccagttc ttttcttacg gacactagaa gacatcactc
      961 aagctcttca tgttccttct gtcgaagaaa aagaggaaat ggaagaaact cagcaggaat
     1021 ttgacctctt ttccttcatg gatatggaag aatctcaaga gccggtttct caaatgacgg
     1081 cttctgtacc atcaaataag ggagaggcta aacaagaaga agcattgtcg gaagatgagt
     1141 tggaaccaaa agtcattaag acgcccccag ccactgattt tcactttcca gaagatttga
     1201 cagactttta ccctaagaca acaagggata aggttgaaac taacgtggct gctgttcgtt
     1261 tggtgaaaag tcttgaatct gaacaccgtc aagccacacc aagtgaacaa gaactccttg
     1321 ccaaatacgt gggctgggga ggacttgcta acgagttttt tgacgagtat aacccaaagt
     1381 tttctaagga acgtggggca ttaaaaacgc tagtcaccga taaagagtat tcggacatga
     1441 aactatcttc tttgacagct tattacacag accctcactt gattcgtcag atgtgggaga
     1501 agttagaacg tgatggcttt actggtggta aaatcctaga cccgtctatg ggaacgggga
     1561 atttctttgc ggcaatgccc aaacacctga gagaaaatag taagttgtat ggtgtagagt
     1621 tagacacgat tacaggaact attgccaaac accttcatcc gaatagtcac attgaagtaa
     1681 agggctttga gaccattgtc tttaatgaca atagctttga tttggttctc tcaaatgtgc
     1741 cttttgccaa tatcaggatt gcggacagtc gctatgacaa gccctatatg attcatgact
     1801 attttgtcaa aaaatccctt gatttggtgc atgatggtgg gcaagtggct attatttcct
     1861 ccacaggaac catggacaaa cggacagaaa acatcctcca ggacattcgt gagatgactg
     1921 attttctcgg tggtgtgcgt ttaccagata acgcctttaa ggccattgca ggtaccaatg
     1981 tcacaacaga catgttgttc ttccagaaac atatggataa gggatatgtg gcagatgatt
     2041 tagctttttc aggttctatt cgctatgaca aggatgaccg tatttggctc aatccttact
     2101 ttgatgggga ctacaacagt caggttcttg ggagctatga ggttagaaac tttaacggtg
     2161 ggacactttc tgtaaaaggc acttctgata acctaataga agctgttcag acggctctta
     2221 aacaagttaa agcgcctaga agtgttgacc cttctgatat ccttatcact cctgatgtga
     2281 tgagaagaca agtcattgat acctctgttc cgcctgaaat cagagaaagc ttagaccagt
     2341 atagctttgg ctataaagat tctacggttt actaccgtga tcataagggc attcgtgtag
     2401 ggacaaagac agaggagatt agctactatg tggacgagga ggggaccttt aaggcatggg
     2461 acaccaagta ttctcaaaaa cagattgacc gttttaatgc tttagaggtg actgatagca
     2521 ccgctcttga tgtgtatgtg acagaagaag ccgctaaacg tggacaattt aagggctact
     2581 tcaaaaagac tgttttctat gaagcgcctt tgtctgagaa agaagtagca cggattaaag
     2641 ggatggtcga tattcggaac gcctaccaag aggtgattgc cattcagcga tactataact
     2701 atgataaaga cgagttcaat cacttgttag gacatctcaa tcgcacctat gatagttttg
     2761 tgaaacgttt tgggtacttg aatagtgctg tgaaccgtaa tctctttgat agtgatgata
     2821 agtattcgct ccttgcgagt ttagaagatg aatgccttga ctcaagtggt aagactgtta
     2881 gttataccaa gtcgcttgcc tttgaaaaag ccttggttcg tcctgaaaag gaagtgacgg
     2941 cagtttcttc tgcccttgac gctctaaatt ctagtctagc agatggtcgt ggggtcgatt
     3001 tggattacat gatgtctatt tatcaaacag actctaaagc gtctttgatt gaagaattag
     3061 gagacgctat tattcctgac ccagaacgct atctaaacga tagggaagtg gtctatgaat
     3121 ctcggaagga tttcttatca ggggatgtga tgactaagtt agaggtcgtg gacttactca
     3181 ttaaagaaga caattctgat tttccgtggc aacactatca aaacctctta gaagacgtga
     3241 aaccaccacg tgtgacctta gctgatattg attatcggat tggctcacgt tggattcctc
     3301 tagccgttta tggtaaattt gcccaagaaa cctttatggg acaaactttt gacctgactg
     3361 accaagaagt atcaactgtt cttgaagtca gtccgattga tgggacgatg tcttaccaat
     3421 ccaagtttgc ctttaggtat tctaccgcaa cggatagaag tctaggtgtg cctgggtcac
     3481 gctatgatag tggccgaaaa atctttgaaa acctgcttaa ttccaatcaa ccaaccatca
     3541 ccaaacaagt ggaagatggg gataagaaaa agcatgtgac agatgtggag aagacaacgg
     3601 ttcttcgtgc taaggaaact gagcttcaag aactcttcca agactttgtg gcaagttacc
     3661 cagaggtgca acagatgatt gaagaaacct ataatagcct ttataatcgt acagtttcaa
     3721 aagtctatga tggcagtcat ttaaccattg atgggcttgc ccagaatatt tccttacgcc
     3781 ctcaccagaa gaatgccatt caacgcattg tggaagaaaa aagagcgctt ctagctcatg
     3841 aagtgggttc aggtaagacc ttaaccatgc ttggggcagg cttcaaactg aaagaactcg
     3901 gaatggtgca taagcctctt tatgtggtgc catcaagtct gaccgctcag tttggccaag
     3961 aaatcatgaa gttcttccca acgaagaatg tttacgtgac gaccaagaaa gattttgcga
     4021 aagccaaacg taagcagttt gtctcacgga tcatcacagg ggactacgat gccattgtca
     4081 ttggggattc ccagtttgaa aaaattccca tgagtcagga aaaacaggtc acctatatcc
     4141 aagataaact gaaccaatta cgagaaatta agcaaggtag cgacagtgat tatactgtaa
     4201 aagaagcaga gcgttctatt aagggattgg agcatcaact agaagaactc caaaaactgg
     4261 agcgagatac ctttattgaa tttgaaaatc tgggcattga ttttctcttt gtggacgaag
     4321 ctcaccattt caagaatatc agacccatta caggcctagg taatgtggca ggaattacca
     4381 acacgacttc taaaaagaac gtggatatgg agatgaaggt gagacaggtt caaggagaac
     4441 acgactatcg taatgtggtc tttgcgacag gaacgccagt ctctaactct attagtgaac
     4501 tctataccat gatgagctat attcaaccag atgtcttaga acggtatcaa gtctcaaact
     4561 ttgactcatg ggttggagct tttgggaata tcgaaaacgc tatggaacta gcaccgacag
     4621 gggataagta ccaacctaag aaacgcttta agaagtttgt gaacctgcct gaactcatgc
     4681 ggatatacaa ggaaactgcg gacattcaga cctctgatat gcttgattta cctgtccctg
     4741 aagctaaagt tattgcagtg gagagcgaac tgacagaagc tcagaaatat tatcttgaag
     4801 agttggttga ccgttcagac gctatcaagt ctggtagcgt tgaccctagt gtcgataaca
     4861 tgttaaagat aactggggag gctagaaaac tagctattga catgcgtctc attgacccag
     4921 cctatacctt atcggacaat cagaagattc ttcaagtagt ggataacgtg gaacggattt
     4981 accgtgaggg agaaaatgag aaagctaccc agatgatttt ctcagatatt ggaacgccta
     5041 agagtaagga agaaggcttt gacgtttaca atgaattgaa agacctttta gtggatagag
     5101 ggattcccaa agaagcaatt gcctttgtcc atgacgctaa tacggatgac aagaaaaact
     5161 ctctgtcacg caaggtcaat agtggagaag tacggattct catggcttct acggaaaaag
     5221 ggggaacagg attaaacgtc caatcacgta tgaaagcagt ccaccattta gacgttccct
     5281 ggaggccgtc tgatgtagga cggattttgc ggacattcaa aataaaaaag aatgtggagg
     5341 taacagacaa tggcaaagac aatttttgag gaaatgggcg gcaaatacga aaggcaaggc
     5401 gattatttaa taccgtgctt aactgtaccc gccgaagaag aacagccgat aggcatctgg
     5461 ggacagcggc atttggatta tctgaagcat cactgcaaag ttacatacac caatcttctt
     5521 acaagcggca ggctaaacgc ctaccttgcc gacatcaaca gacaggcaca ggaacgcttt
     5581 gaaaggctca tagagggtat gaaacaggca cagggcataa cggctaaagg cagaaaacgc
     5641 cttagaatgg acaggatgcc tcaataacat aagggcttgt gcgagggaga ttgtggaaaa
     5701 ggaaattatt tttgcataaa cagatgatta gtggcagggg gaaatcctgc cgctttttct
     5761 gctttagttt gtcagcttga caaataaagg gttaaggaat ataattagat tcagtattat
     5821 acaaggagtt aataaatatg cggcaaggta ttcttaaata aactgtcaat ttgatagtgg
     5881 gaacaaaaag tagcagtccc gtttcacttt taatatgggg cttggttttt tgtacccagt
     5941 ttaaaaatgc ttttatcatg taattttata tgcccgaaaa catataagtg ttttggggct
     6001 attggagtta tttacccagt gataggagta tttatcactg ggtattttta tgcccttttt
     6061 tgggtgttga taggaggaaa atcacatgaa aataattaac ttaggcattc tggctcacgt
     6121 tgacgcagga aagacaacat taacggagag tttattgtat accagtggtg caattgcaga
     6181 accagggagc gtagataaag gcacaacaag gacagataca atgaatttgg agcgtcaaag
     6241 gggaatcact atccagacag cagtgacatc ttttcagtgg gaggatgtaa aagtcaacat
     6301 tatagatacg ccaggccata tggatttttt ggcggaagta taccgttctt tatccgtatt
     6361 agacggagca gtattattag tttctgcaaa ggatggcata caggcacaga cccgtatact
     6421 gtttcatgca ctacagacaa tgaagattcc gacaattttt ttcatcaata aaattgacca
     6481 agaggggatt gatttgccaa tggtatatca agaaatgaaa gcaaagcttt cttcggaaat
     6541 tatagtgaag caaaaggttg ggcagcatcc ccatataaat gtaacggaca atgacgatat
     6601 ggaacagtgg gatgcggtaa ttatgggaaa cgatgaacta ttagagaaat atatgtcagg
     6661 gaaaccgttt aaaatgtcag aactggaaca ggaagaaaac aggagattcc aaaacggaac
     6721 gttatttccc gtttatcacg gaagtgctaa aaacaatctg gggattcggc agcttataga
     6781 agtgattgcc agtaagtttt attcatcaac gcctgaaggt caatctgaac tatgcgggca
     6841 ggtttttaag attgaatatt cagagaaaag gcggcgtttt gtttatgtgc gtatatatag
     6901 cggaacattg catttgaggg atgttattaa aatatctgaa aaagagaaaa taaaaatcac
     6961 agagatgtgt gttccgacaa acggtgaatt atattcatcc gatacagcct gctctggtga
     7021 tattgtaatt ttaccaaatg atgttttgca gctaaacagt attttgggga acgaaatgct
     7081 gttgccgcag agaaaattta ttgaaaatcc tctccctatg ctccaaacaa cgattgcagt
     7141 aaagaaatct gaacagcggg aaatattgct tggggcactt acagaaattt cagatggcga
     7201 ccctctttta aaatattatg tggatactac aacgcatgag attatacttt cttttttggg
     7261 gaatgtgcag atggaagtca tttgtgccat ccttgaggaa aaataccatg tggaggcaga
     7321 aataaaagag cctactgtta tatatatgga aagaccgctt agaaaagcag aatataccat
     7381 ccacatagaa gtcccgccaa atcctttctg ggcttctgtc gggttgtcca tagagccgct
     7441 ccctattgga agcggagtgc agtatgaaag cagagtttca cttggatatt taaatcaatc
     7501 gttccaaaat gcggttatgg agggggttct ttatggctgc gagcaggggc tgtatggatg
     7561 gaaagtgaca gactgtaaaa tctgttttga atatggattg tattatagtc ctgtaagtac
     7621 ccccgcagac tttcggctgc tttcccctat cgtattggag caggctttaa aaaaagcagg
     7681 aacagaacta ttagagccat atctccactt tgaaatttat gcaccgcagg aatatctctc
     7741 acgggcgtat catgatgctc caaggtattg tgcagatatt gtaagtactc agataaagaa
     7801 tgacgaggtc attctgaaag gagaaatccc tgctagatgt attcaagaat acaggaacga
     7861 tttaacttat ttcacaaatg ggcagggagt ctgcttgaca gagttaaaag gataccagcc
     7921 agctattggt aaatttattt gccaaccccg ccgcccgaat agccgtatag ataaggttcg
     7981 gcatatgttc cacaagttag cttaacagct tgcaaaagtc atataaaatg agatttgaaa
     8041 ggattagaga ctaattatga tgaaatgcga atggatattg tgtcctgttt gtgggagcaa
     8101 aacccgtaat aaaattagga aggacactgt tttggagaat tatccccttt attgtccaaa
     8161 atgcagacaa gaaagattga ttaaagttga caacttgaag ataactgtca tcaaagagcc
     8221 agacgcttaa gacgcagagc cgatgaaatt gtggaacaat tcacgaatca tcggctcttt
     8281 ttgtttcgta tttgaaagaa caaactcacc aaataaaaaa aacgatattc gggtgggtta
     8341 ttttgttata ccctaaatta ccctctgaat ttgtttttaa atttggaggg atttttttat
     8401 gtcctttttt cgggcagtta tctatctgct catacgaagc aaaatttatc aatacatagc
     8461 atatcagaga acggcaggaa accagttaaa aaaatttctg ccagtgcaac ggtacttctc
     8521 accttgaaag tagaagtaca atctccatac aatagaatta ctatttccta taaccgtaaa
     8581 ggtcacagag cctttgcggt ttttcttttg tcgatttttg ttggaaagtg ccgtagggct
     8641 gtttctgata tgcggtgtcg ttctccgcct ctccatctgg attttttaca tttcaaaaat
     8701 tcagatggga ggtatttatg gtgaaatatg caccaagaaa ggtatatatc agagaaagtg
     8761 gcggctatgt ggaattatcc tacacggagt tctgccgttg cagggaatcc gaccagacct
     8821 atatggacaa gctgtttatc cccattcaag gctgtctgct tgaagtcgtg agggagcaat
     8881 acacagactt ctaccgtgac aaggaacggt ggcgttatct gcaaaaatta gatacaaaga
     8941 atagactgct atctctcgac ggatttacgg acagcgaggg gaatcctctg gactttatca
     9001 ctgatgaagc ggtggacatt gcagaaaccg ttgtcaatgc ggtcatggtg gacaggctga
     9061 aagccgccct gcctttgctg tcggatagtg aacaggagct gatacaggca atcttttttg
     9121 acggactttc cgagcgtgaa gtcggggcga ggttgggcat aacccagagc gttgtaaaca
     9181 aacgcaaagc cagaatccta ataaaactaa gaaagataat agaaaattaa aatttaaggc
     9241 gttcagcccc cttgtttttt cctttgggaa gatgaggggg cttttctctg ccctctcaat
     9301 caattctgat tggaggaagt aagaatggca tacaaccacg gacgggagga caggaaatgg
     9361 cgtatctgga aagaagcgga ggaaaagctg ctgcgtgagt gcggcgttga tgaagcgacc
     9421 attgagcaga tacgcatggc ggacagggca gacttcaatt ccaacaggcg gttttaccga
     9481 tggacgaatg acgttgcgga atatcttgag gacatggcag gcagggagcg gcaggcggaa
     9541 gtgggtacgg ttgcggagtt actggaagag attgagagcg aaaatctcta tcaagtatta
     9601 gtcacggtgg acgggcgtac cttgaaaatc gtcctgctga aaatgcaggg gtattccaca
     9661 aaggagattg ccccgcttgt gcatttgacg actggtgcca tctatgcgag gttagaccat
     9721 ctgcggaaga agctgcggaa aattttatag cttctaaaac agcctgccat cctgcgggct
     9781 actgggtgag ggatggaaat cccctcactc attttttgca ggaggacaac aggatggcat
     9841 acagggttaa ggcatacacg cttcgggagg aatccacgga aagcggcaca aggtatttta
     9901 tcagctttaa ggacgggcag ggcaaatccc acgagttgga agtgtcggaa cagttcttta
     9961 tggagtttcg gcagatggag cgcaggaaca ggaatctttt ctaatgggac gagcggcaca
    10021 gggagtttaa cgaggtatgg gacgaaaccc tttacagacg ggcgttgcgt gtgcctaaga
    10081 gccttgatga acgcatggtt gaggaagaac ggaatgaaac gctctataag gcggttggga
    10141 gccttccaga gatacaaagg cggcgtttcc tgctctacta cgagtatgag ttcaattttt
    10201 accaaatcgc cgctatggag cattgcaccg cttcggcaat acagaaatct gttgcgattg
    10261 caaaggagaa agtaaaggcg gaaattgaag aaatatctcc aaccgtgacc gacaccgccc
    10321 gaaaaagaaa tctgtttttt atttgtgtgg gattggcggc attacatact ctcacttttt
    10381 tccgtgggag taaatctatt tttaaggagg tcaacgccta tgtgcaacga aaacaaagac
    10441 accgcccgaa aggaggaaag ccatgcagaa gttacagaca gtcaacgccg aaacgctcct
    10501 ttatgaaccg cttgagaaac catcctttgt ggtggacagc cttatcccga caggcttatc
    10561 gctgttctgc ggctcacaga agataggcaa aagctggctc atgctgaagc tatgcttatg
    10621 cgtgtcgcag ggaatccctt tatgggatat gccgacaatg gagggcgatg tgctttacct
    10681 ctgccttgag gacacgttct gccgcataca ggacaggtta tttcgtttga cggacgaagc
    10741 aagcgggcgg ctccactttg ccgtggcaag ctgcaagctg tcagacggtc ttatcgtgca
    10801 gcttgaagat tatctgaaag attacccaga cagcaggctc attgtcattg ataccttgca
    10861 gaaagtccgt acagcttcaa aagacaatgc ctatgcaagc gactatgggg acatctccct
    10921 catcaaagac tttgccgaca ggcactctct ggcggtcatt gtcgtacacc acatccgaaa
    10981 gcagaatgac agcgacgtgt tcaacaaggt gtctgggacg acaggattaa cggggagtgc
    11041 ggacgctacc tttgttctgg aaaaggagaa acgtgcgtct gacaccgcca agctgtatgt
    11101 gacgggcagg gacacgcctt atcaggaata cacgctgcgt ttccgtgatt gccgttggga
    11161 gcttgtggag cggaaaacgc aggagcagct tgcgaaagaa acgataccag atgtcctttt
    11221 tcggttggtg gattttatga gggataagga agaatggata ggcacggcaa cggaactgtt
    11281 agccgctatg ggggaaacgg aaaccatacc cacggtgatt acgaaatggc tgaatgaata
    11341 ccgcaccaca tttttaagcg agaaccgtat ctgctaccag tacagccgca ggaaagacgg
    11401 caggcggatt gcccttgcaa ggagggcggg tgacagcggt gatggtggtg acagcgatat
    11461 taggataccc ccctgttact gtcattgacg cttaaagcca tgtaaagctg gcggctctgc
    11521 cctgcgggtg acagcagtga cggtggtgac agtgatttta ggataccctg ccgctgtcat
    11581 ccctacggga gaacaccccg taaacgcaaa atgcaggcgt gagatttact cgcccttttc
    11641 ggtcgtgtaa aaccacccct gcggtcagaa aaatcattcc gatttttccg actgcgttta
    11701 cagggtgtaa cacactacac tttgccctgc aaagtcgtgt gccagacgtt ccctctggac
    11761 tcccttaagg cagggctgtg ccctgctatc ctacgcctta cggcttcgga taaaagaatg
    11821 gcggcatgac ggtgacggct cttgcgaggg gggtatccca aaaacaccgt catcatcgac
    11881 atgaccgtca tgcagggggt gagggtgaca gttgcggcag tcggcagggg gtatcccaaa
    11941 actgctgtca ccaccgtcac cgctgtcacc ccaaaggacg gtcacccgcc gaaagaaagg
    12001 aggaatccgc ctatgcctta tgcaatcctg cgtttccaga aacgaaaagc gggcggcgtt
    12061 gcggcttgtg aacgccacaa cgagcggaag aaagaagcct acaaaagcaa cccagatata
    12121 gatatggaac gctctaaaaa caattaccat ctcatagcac caccaaagta cacctacaag
    12181 aaagagatta accgcatggt agccgaagcg gggtgcagga caaggaaaga cagcgtgatg
    12241 atggtggaaa cgctcatcac agcttcacca gaatttatga accagttacc gcccgaagaa
    12301 caaaaagcgt atttccagac ggctcttgac ttcatttcgg agcgtgttgg aaagcagaat
    12361 atcctctccg ctgtcgtcca tatggacgag agaacgcccc atatgcacct ctgctttgtg
    12421 ccgattacgc cagacaataa gctgtcagcg aaagctatct taggcaacca gaaatcatta
    12481 tccgagtggc agaccgccta ccatgagcgg atgtcctcac ggtggaatca gcttgaacgg
    12541 gggcagtcct caatggaaac caagcggaaa cacgtcccca catggctcta taaattaggc
    12601 ggcaggcttg ataaacagta tgaagaaatc gtgtctgccc tatccgacat caacgccttt
    12661 aacgcaggga agaaaaggga taaagcgtta gatttactct ctgcatggct gccagacgtg
    12721 gagaaattct ctaaggaaat cgggaaacag caggcgtata tcgacagttt gaaagagaga
    12781 attgggcagg aatcagacta tgcggggcgt atgcgtgatg aaaagtacga gcaggaacta
    12841 aaggtgcaga aagcgaatca gaagatattt gaattgcaga gaaccaacga gcagatgggg
    12901 cggctgctgt caaaaatacc gcccgaagtg ttggaagaat tgcagaaaaa tcatagaagc
    12961 agagcgaaag aaaggtagat atgtgaatga agaaacagga ttttaaggtg ttaaagacca
    13021 aagacttgta cccgttcccc gacaatccgt ttcatgtggc agaagatgaa acactgtcag
    13081 agttagcgga aagcatcaag gaatttggca ttgtcacgcc gataatcaca cgcccgaaag
    13141 aggacgggga cggttatgaa gtgattgcag gacagcggcg tgtccgtgct tctgaacttg
    13201 cagggataaa taccgtgcct gcgtttgtcc tgcccttaga ccgtgaccga gccatcatca
    13261 cccttgtaga cagcaatttg cagcgtgaga atatcctgcc atcggagcgg gcgtttgctt
    13321 acaagatgaa atccgaagcc atgaagcggc agggtttccg cacagactta acctcgtcac
    13381 aagttgtgac gaagttgcgg acggacgaca aggtggcaca gggcttcggc gtgggcagga
    13441 tgaccgtgca gcgttttatc cgcctgacgg aactgatacc gccgattttg cagatggtgg
    13501 acgaggggaa aatcgccctc acgcctgcgg tggaactgtc cttcttgaag aaagacgagc
    13561 aggaaaacct ctttgccacg atggagagcg aagaagcaac gccctcactc tcacaggcac
    13621 agcggatgaa acagttaagc cagagcgggc ggcttgacat ggatacgata tttgcgatta
    13681 tgacggagga aaagggcaac cagaaagaaa ccttgaaaat caacacaagc aagctgaaaa
    13741 aatactttcc gaagaacaca acgccgaagc agatggagga aaccatcatc aaacttttgg
    13801 agcgtgagtt gcagaggaaa cgcaaccgtg acagccgcta atcttctttt ttcgggaagt
    13861 aaatacagag agttgaggta tggagaatga gagaaatcca gtatgaaatc gtaaaggaaa
    13921 tcgcagtatt gtctacgggc gacagtggct acacaaagga aatcaatctc atttcatgga
    13981 atgggaaaga gccgaagtat gacatccgca gcttttcccc gaaccgtgaa aagtgcggca
    14041 agggaatcac gctgaacgct gatgaagcgg cggcactcct taaagcatta cagaaagaat
    14101 taaacagcga ggattaatgg tatctgattg gcagggcggg gacatttcca aactcttccc
    14161 tgccctgtct ggaaaggaag atttaagtat gggcgaggat aagaaagcag ataaaaagag
    14221 aaagcgtatc gtgccaaaag caccagtgca gatgataatc agccgtgaat atgtcggcac
    14281 acagaccgtt acagaagcgt ttgtcccgat tatctccgag gatattcgga agaagattgc
    14341 cgagggcgac accttcgaca atgaggggct gtccgcttag aatgtacgca atgggacatg
    14401 aaaacagata ggacagatac ggaggtttta cagtatggca ggaatcaaag aagaaaagaa
    14461 aatctattta gtcggcattt attgccgctt atctaaagac gatggtacgg ataacgagag
    14521 tgcgagcatt gcgacacaga aatccatcct cacggattat gtgaaaaagc agggatggca
    14581 catagcaaaa acgtataaaa gccctcttta aagggctttt atgtttattt tgagaaagat
    14641 ataaaatcaa tatatccctt ttctccgatt tttacaacgg cattgtagga ctttctatct
    14701 ttcgttttga ttccttttac cagggtttct tttccctcta gtaattcttt tacatttgtt
    14761 ttggtgagtt ttttctttct aaaatgttca gctaaagtga aggtacattc aggataattt
    14821 gaacaaccat aaaacgattt ttttaataca atattgttgc cacacttagg acattttcct
    14881 acaaggggtc ccgagcgctt agtgggaatt tgtacccctt atcgatacaa attccccgta
    14941 ggcgctaggg acctctttag ctccttggaa gctgtcagta gtatacctaa taatttatct
    15001 acattccctt tagtaacgtg taactttcca aatttacaaa agcgactcat agaattattt
    15061 cctcccgtta aataatagat aactattaaa aatagacaat acttgctcat aagtaacggt
    15121 acttaaattg tttactttgg cgtgtttcat tgcttgatga aactgatttt tagtaaacag
    15181 ttgacgatat tctcgattga cccattttga aacaaagtac gtatatagct tccaatattt
    15241 atctggaaca tctgtggtat ggcgggtaag ttttattaag acactgttta cttttggttt
    15301 aggatgaaag cattccgctg gcagcttaag caattgctga atcgagactt gagtgtgcaa
    15361 gagcaaccct agtgttcggt gaatatccaa ggtacgcttg tagaatcctt cttcaacaat
    15421 cagatagatg tcagacgcat ggctttcaaa aaccactttt ttaataattt gtgtgcttaa
    15481 atggtaagga atattcccaa caattttata cctctgtttg ttagggaatt gaaactgtag
    15541 aatatcttgg tgaattaaag tgacacgagt attcagtttt aatttttctg acgataagtt
    15601 gaatagatga ctgtctaatt caatagacgt tacctgttta cttattttag ccagtttcgt
    15661 cgttaaatgc cctttacctg ttccaatttc gtaaacggta tcggtttctt ttaaattcaa
    15721 ttgttttatt atttggttga gtactttttc actcgttaaa aagttttgag aatattttat
    15781 atttttgttc atgtaatcac tccttcttaa ttacaaattt ttagcatcta agctttaatt
    15841 ggtttaataa attgacttcc aataattgag agtcattttt atttaattca tgattcaaaa
    15901 catagtttaa tactcgatta taaacgcttg ccgataattc gttaatgatc tctatttcaa
    15961 atgttttttc ataagtaact gccatttcat tttcactcct tttaaagttt gtcaggtaaa
    16021 tatttccgaa tatattcttc taaggcttta tccataactt cttttacgtt tccgccattc
    16081 tttgctgttt cgatttttat aatatggtgc aagtcagcac gaacacgaac cgtcttatcc
    16141 cccataatat ctttttttgc actgattggt gtatcatttc gttttgcttt ttgtgcgcct
    16201 aaatttccca caaccactca cttctttcta tttcttctta ctcttatttt atcatcaaca
    16261 atcacaaatc acaagtgatt tgtgattaat cacttgtgat ttgtgattct attctttttc
    16321 gttttctaat tgaatgattc gctcaagcat ttcaaaaaat acgttctcat acatagataa
    16381 aacttttttg tcatagcctt tgtgttctgt aatgccgttt ttagaccagg tacttacttt
    16441 attacttcgc ttgataatat tttagaaaac caagttatct tctttatgtt gcttgtacag
    16501 ttcttccagg tttgatttta tcgttgtgct gtccgtatca actaaataag gaacaaaacc
    16561 gatcatatct agtccagggt taaactgttc ttgtaaatca atcaaatagg aaatatagtt
    16621 ttgaatgttg tttgtacttt cttcttctgc ttgtaaaggg atcatgacgt aatcacttgc
    16681 cacgattgca ttatttgtat aaacgcttgg cgttggtaca gtatcaataa taatgagatc
    16741 atagtcactt tttaaaggtg ctaaaagagt agcaagcaat ctactttcat tttcaaaagt
    16801 ccatgagcga gttaattttg gcagtaacat caaatcaaac gtgccaggga tcaagtctaa
    16861 attatcagtc aaatgaacaa tagaagaagc caagtttcca tttttcagtc cttcataaaa
    16921 attaacacgt ggcaattcta ccttaaatgt ttttgctaag tcttttgtca atgttgcttg
    16981 taagtcctta tcgatcatta aaacttttaa attaaatttg tctgtcaagt aagcaaacat
    17041 agtcgataat tttgactttc caacaccacc tttaaaataa ttgtttaaga taacaatcgc
    17101 ttcattttta ctgtttaaaa tacgtcttaa ttcttcaagt attttgagtt cttccttctc
    17161 cataactacg ccccattctt tttttgtata gtaatattgt atcattagga atcacaaatc
    17221 acaagtgatt tgtgattaat cacttgtgat ttgtgataag tgatttgtga ttaatatatg
    17281 tggacgatgg ttattctggt acaaatttcc aaagaccaag tttccagaat atgataaaag
    17341 acattgaaag cggtctgata aactgcgtga ttacgaaaga tttatcccgt ctggggagaa
    17401 actatcttga ttgtgggtta tatctggaag ttttcttccc agagcataac gtgaggtata
    17461 tagcggtcaa tgacggcgta gataccttga ataaatctgc tatggacatc acgcctttcc
    17521 gcaacatttt aaacgaaatg tatgccgctg acatatctgt taagataaaa tcggcatatt
    17581 gggcgaggtt tcaacagggg aaattcatgg gaactaccgc cccttatggc tatatcaaag
    17641 accctgccga ccacaaccat ctgctgatag atgataaagt ggcacatgtt gtaaaagaga
    17701 tattcgacct tgcattaaaa gggaatggag ttgccaaaat ttgcagacat cttaataaac
    17761 agcatatcct acgccctgcc gcttatgcgg cggagcgtgg cgaaacaggc tttgaacgtc
    17821 attttgaggg gaacgaggac aaacgctata tttggagtgg gaacagcgtg aggagcattt
    17881 taagaagccc gatatatgcg ggaaatcttg taggctacaa acggattgcc gccaatatga
    17941 aaagcaagaa acgcccctct aagctgcccg aagaatggga agtgataccc aatacccatg
    18001 agggaatagt cacgcaggag gaatttgaca ccgtacagca gcttatgacg agccgcaggc
    18061 gggagcagaa cgcaggggga tttgagaata tcttttcggg cgttatcaag tgtgcggact
    18121 gcggctatgc gatgcgggcg gcgagtgcca acaggaggaa acgccccgac atcatcgact
    18181 gcgtacaata cacctgcaat aattatggca gatatggcaa tgttatgtgt accgcacaca
    18241 gcattgaagc gagggactta ttcaatgccg tccttgccga catcaaccgc tttgcggata
    18301 tggcggtcaa tgatgaaaag gcggtcagag ccatagaaag gcggctcacg gaaacagacc
    18361 agagcagggc gaaatcatta gagaaagaaa agaagaagct gaacaaacgc cttgcggagc
    18421 ttgacaggct gttttcctct ctctatgagg acaaggtaat ggagcgtatc acggagcgga
    18481 attttgagat gatgtcgggg aaataccaga aagagcagct tgaaattgaa gcacggctga
    18541 aagaggtaac ggaaacgctc aatgacagct atgagaaatc gcagggcgtg agggactttc
    18601 tatccctaat ccgcaactat caggggctga aagagttgga cgcaaccatc ataaacgcac
    18661 tcatagacaa gatacttgtt tcggaacgtg agaaacttgc ggacgggaca gtaaggcagg
    18721 aaatcaagat ttactatgaa ttcatcggct ttgtcggtga attacatatc acacccacaa
    18781 agcggtggac ggcgttaaag cctaaaaatt gtacggtgtg cggtgttgaa tacgtcccca
    18841 gctctggaat atcaaagtat tgtcccgctt gtgctaagag gatacagagg gagaaatcaa
    18901 acgagagcaa acgcaggagt agggagagga accgaagggc atgtattgaa ctgtccgcaa
    18961 aaaatgaccg actgatattg tccagcgcaa tggtaggtta attcgtcaag gcaatatgca
    19021 ccaagaggta gatatctatc attatattac gaaagggagc ttcgataact acctttggca
    19081 aactcaggag aataaactca aatatatcac gcaaatcatg acctctaaag accctgtacg
    19141 gtcggcagaa gacattgatg aataaaccat gactgcttca gactttaagg ctttagcgac
    19201 aggtaatcct tatctcaaac tgaaaatgga actagagaat gagttgacgg tattggacaa
    19261 tcaaaagcgt gcctttaatc gctccaaaga tgagtatcgc cataccattt cttactgtga
    19321 gcagaacctc cctgtattag agaaacgcct tagccaatat gaccgtgata ttgcccaatc
    19381 tttggcaact aagtcacaag attttatcat gcggtttgac aatcaaatga tggataaccg
    19441 tgcagaagct ggagactatc tacgtaaact cattacctat aaccgttctg aaaccaaaga
    19501 agtaagaacg cttgcgacct ttagagggtt tgagcttaaa atggcaacca gaagtcctag
    19561 tgagcccttg ccagatatgg tgtctttaac catttcaggc agcaaccagt attctgtctc
    19621 tttagacttg aaatcagacg taggaacgat tcaacgcatt accaatgcca ttgaccatat
    19681 tctagatgac caagaaaaga cagaagagat ggctaacaat ttgaaagata agctatcagt
    19741 cgcaagagtt gaagtggaaa aggtctttcc aaaagaagag gattatcagc tggttaaagc
    19801 caaatatgat atccttgccc ccttggttga acaagaagca gaggttgagg aaattgatgc
    19861 agcactagcc aagttcaatg aaacgctcca accgcaacac gaccaacaac tttcgcttga
    19921 tttttaagaa aaaggctgac aaaaaatatt gaacgcggta aaatgacatt aagaaatcat
    19981 caaaggagaa ttgattatga cccagacagt agaagatata cgctaccaat tagaagaatg
    20041 gttagcacaa ggttttacaa gctccgaaga ccgagctaac tatcaagcct taaaggaaca
    20101 atatgaagat gaaacccttg attacagctt ttcaaagcga gaaatcattg gtcaattaga
    20161 agttattatc acgactcgtg agaatgattt tccagactta gatgaggtca ccaaagaaga
    20221 gtatcttgaa ctggttgaac aacttgataa tctagataag ggacaggcag actattatcg
    20281 caagcaatta gcgtagaaag aggtacagat atgattgaac aaattattca aagtcttttc
    20341 attatcgcag taacagggct gattttgctt gtcctttacc agattgcgaa gatgcttgga
    20401 agcttatttg tcattggttt aatcggattt ttagctttca cagaagtcta tggaatttac
    20461 ctctttttta cagaacgata cctctatgtg gaagatttag ccaccaatgg aattttcagc
    20521 tttaccactt tctatattat ttttaatctt ttacttgtct ttggacttgt tagaaaagtt
    20581 gttagaagtc ggatggcatg acgtaatggg attacctaag ttaggtagtc cttttcttta
    20641 ttgtgataac ttttccaagt ccatcttgtt atcatggtgc tatcttatgg aaaaaggaga
    20701 tagcactagt gatgttaaat aaaatgaagg ctcggctatt gattggttta ggaggtctag
    20761 ctgtgactag ctttatggtg atgatgggtt acaccattgg ttctcagtct gtcaccaatc
    20821 acacgcagaa acaaatccaa tcggaggcgc aaaaattact gaccaaagag aaagaaaaag
    20881 agaaggcaag tgtcctctct gatgagttag tcaaggaatt tctcacccaa tactatacta
    20941 aggaaaagct gggcgagaat aacaaccgta ttaaacccta tatgacagat tctgccttta
    21001 aggaagaggt agctcgtcaa gaagattcca tcaaccagat ctataaagac tatatgttgg
    21061 attatcgctt tgagtctgcc aatatctatg tcaatacaga agcaaatgaa gcttttgcgg
    21121 aagtgtctta tcaggttgtt tacgtgtcag aggtcagtga taaggctcag aaaagcacac
    21181 agacagaaac aagaactctt aaactatctt atgccaaaat gtcagataaa ctccttgtca
    21241 atcaggtaac catttggaat gggaagctag aggacttgaa agagtcttct gatggatctg
    21301 actcaagcat tccaaagatt caaggcacta ctacaagtga gaccaactag caggagttac
    21361 tcttctgctt tttttgataa ggagatggca tgacaagaat tgaaaaagtg aaacaaaagg
    21421 cgattttaga ggtggcagaa agtctaggtt attcttttaa acgactatca gggcaagtct
    21481 atgaacatcc agaacacgat tcctttagga tttttgcgga caccaatacc tttaaatggt
    21541 tttcacgtga cgtacaggga gatgtgattg attttgttca gttaatgaca ggagtgtctt
    21601 ttaaaaaagc cctgtcttac cttgaaactg gagactttga acaagctaaa atcgtcgaag
    21661 agacctacca accctttcgt tattatctaa gagaagaacc atttgaccaa gcacggatat
    21721 atctgaatga cattcgtggt ttaagtgatg acactatcaa tgcttttggc agacaaggtc
    21781 tattagcaca ggcccattac cagacaaaga cctttcaaga atcagtcctt gtctttaaga
    21841 gttacaatca tcaggggcaa ttagaagggg caagtcttca agggcttgtc aaaaatgctc
    21901 agagacatga tcgagattac ctcaagaaaa tcatgaaagg gtctcatgga tatgtgggaa
    21961 tgagctttga tattggaaaa ccgaaacgcc ttatcttttg tgaatcggta attgatatga
    22021 tgagttatta tcaattccat cagaagcagt tatcagatgt gcgtttggtt tctatggagg
    22081 gcttaaaact ctctgtgatt gcttatcaga cactaaggtt aacagcagag gaacatgaca
    22141 agctcaattt tttagataat atcaagccaa gtaaattaac gtattttctt cgtatcatac
    22201 aagaaacaac tgtctttttt cagaatcacc caggtttgat aacattagct gttgacaatg
    22261 atgaagcagg gcgaggcttt tgtcagaaat tatctgagaa aggacttccc attgaaactg
    22321 acttaccacc attacaggaa ctggaaacta aagcagattg gaatgatatt gtaaaatatc
    22381 aaaataatta ttctctaaaa gatgtaatcc aatcggccaa gttacaagtt atccgaaaca
    22441 atcctccgcc tagaaaaaat accgctttag agttgtgata acaaaatcaa gtttcttaga
    22501 ttaatctaga aagtgataag gaggacaccc tatgagtgtg attgaacgcc tagctgaaag
    22561 agtggctagg caagaggaaa aagttgcgaa agaaacggaa aaactagaaa cttatcgcag
    22621 tcaattacaa acagcgatgt atcaagcctt tatcaaacgc caacaaaaca gtccttggac
    22681 atttgatgaa gcattgacgc aagcctttgg ccaagatgaa caaaaactca aaccatcaga
    22741 taatagaaat gaggaataac acatgacaaa agactggacc tttgaccaac ccttagatga
    22801 taacacaccg acatcttcat cggaagaacg tgcgaagatt gcggcactat ttcataaaga
    22861 aaaccaagag ggcactgaag atgttgacta tgtggcagcc tttgaaatgg aacaacaaaa
    22921 atctaaaaat cagatggctc cacagcaaaa acctcaagag caatccacac caaaagaggt
    22981 gtcctcctca actattacaa acgactacaa gcaacatcta gctgatgtga tggctcagaa
    23041 taatgaagac attcgtcaaa gtcagaagaa aatagaagag ctacaccagt tgattgatga
    23101 caaaaataag caaaataaga aattacaagc catttcagta gccattgatg acttgtaagt
    23161 acgagcagtc cttaaacggg ctgcttttta tggggaaaga agatgaagtt atttaaaaag
    23221 caaacgcata atcaagatag ttttaagcgt cttattcatc gtttatcagg aatgtctgaa
    23281 gccgacttac ataaggtcaa ccaattacta gatgtcgttt ttgattcaac cagccaaacg
    23341 accaatgacg taaaagctcc taaagattta caaaaggagc ctaccctaga tgagactata
    23401 actgaagcta agaataaatt gaagactgag caactcgaaa aacggataga gcaatttagt
    23461 caggcgaaga aaccaaaaag cgaataacgc accaaaaatg gtgcgttatt cgctttttgt
    23521 gttataataa aagtaactaa taggaggaca ttagcaatga ttggagataa tatcaaatcg
    23581 ttacgtaaaa cccatgattt aacacaacca gaattcgcaa agattgttgg aatttctcga
    23641 aatagtttga gccgttatga aaatgggaca agctcgttat caacagagct catagaccgt
    23701 atctgtcaga aatttaatgt atcatatgtt gatattgtag gagaagaaaa aatgttaaca
    23761 ccagtagaag attatcaatt aaccttaaaa attgaagtta tcaaagagcg tggcgcagcg
    23821 attttgtccg aactatatcg ctatcaagat agtcaaggaa ttacttttga tgatgagact
    23881 agcccttgga ttttgatgag tgatgatttg tctgatctta tcaataccaa gatttacctt
    23941 gtcaatactt ttgatgaagt ggagcgttac aatggttatt tagatggtat tgagcgaatg
    24001 ttggagcttg ctaatcatca ggtggtggct taatgcggtt agaagaattt agcaaagatg
    24061 actttgactt agccttaaaa cgaactattc gttccttaac tcgtggtaaa acgacatcag
    24121 ttaccccaaa agccatctta cttggtgggc aaagtggagc aggaaaaaca acgatacacc
    24181 gtatcaagca gaaagagttc caaggtaata ttatcattat tgacggtgat agctaccgct
    24241 ctttacaccc gaattatcta actttacaag aagagtacgg gaaggatagc gtggattata
    24301 ccaaaggttt tgcaggaaaa atggtggaac agcttgtgga tgaactcagt aaacaaggtt
    24361 atcatttgtt aatcgaagga actttgagaa cgacagaagt cccacgaaaa acagcacgac
    24421 tattgaaagc gagaggttat caagtctcat tagctttgat agcaaccaag cctgaattgt
    24481 cttatctcag caccttaatc cgctacgagg aagtctatgc cgtaaaacca agccaagctc
    24541 gagcaacgcc taaagaacat cacgatggta ttgtagaaca tttagttgat aacttacgag
    24601 aattagaaac tgataaacta tttgaccaga ttcaaatcta tcagagagat agaacatgtg
    24661 tctatgattc tgaaatggat gatggtccag cggcagaagt gctactagaa tgcctctttg
    24721 gaaaatggaa taaggtggag gaagagatgt taagggatgt agaagagaaa atagctaatt
    24781 taaaggtaag caatgaatag gattgggagt aaaaaatgac tacaataaaa aaagtaattt
    24841 attttgatga atctaccgcg atggatttct tacagattga atcaaaagga aagttaacaa
    24901 aaacgactga gttaatgtct acattagagg gaggtgctga tgcacagatt attggggaag
    24961 tttcacttgg taaaaatagt gcactaaaga cgatttttga gaaaatggct ggtctaagtg
    25021 gtactgctag tatttcaagt tctggctcag gagctattca aggtaataaa atagcaaaga
    25081 ctattcttga aaattctctt ctatacgatt ttctagatac tgtagaatta aggaagaaga
    25141 attatcttgt tgatattaca gaaaactata ctttagaaat aagtgaaaac tcgatgtctt
    25201 attttgctat gattgcacca atttctgaaa tgatggaagg tagtcaaagt atagatggct
    25261 tggaaaatgt atctatgtca ttttctaaat tgaattctgg aatcagagag attaaaggtt
    25321 attttgagct cctaggctat aataaagctc atgagattga acggattttt cggtttaata
    25381 tcaattcttt caaaaataat tatcgtattc acgacttaac aaaaatgact cttaaacttt
    25441 attcaataaa agtcggagaa actactatta gtgatttaga ttttgagtca caatttagtt
    25501 tacggagaaa tcatttatct ttttctgctc tatcagagga tggaaatgtt gataagagta
    25561 tgaaatatcc agtttatgat gttatacttg caggggtgaa ttaaatggat agtattttac
    25621 tttttaaagg ttctaagaga gactttgata aattattaga ttcaaaagag attgaagatt
    25681 atactccatt tatggaacta attcgtcaat ataatatcac agtgagagcg aatgatgtaa
    25741 atgcatcgca atatattgca gatggctttg gtaaggaaca cattgaaaat gttgttattt
    25801 acgctgatga ttatgcttca gtaactgatc atgttatatc aaattttaat aatattgttc
    25861 ttttaggaca tgacattcaa aatctttata ttcaaaatcc tcccaagaga gttgaatcat
    25921 cattgagagt tcagtttgaa ggtattatag aagagaggta ttcacattat aaggagattg
    25981 cgaaggaaga agttattgat ttatataatc atatgctggc ttctaatgtt gtaggccaac
    26041 agcgagctaa aaaagatgtt tcaattggtc tattaaagaa aaataccctc acaaataatt
    26101 ccccacttgt catgttattt tatggaagct caggtgttgg taaaactgag ttagccaaaa
    26161 caatgagcga atattttaat ggaaaattga cacgaataca gttttcgatg atgcaaacag
    26221 aagaggcata caaatatata ttcggagatg ctcatagcaa aggttcgttg gcaaaagact
    26281 tattgtcaag agaaacaaat attgtcttaa ttgatgaatt tgataaggtg aattctagtt
    26341 tatacaatgt tttctaccaa atgtttgatg aaggggaatt ggaagatata aattattctg
    26401 tagatgtttc taattgtgta tttattttga caacaaattt taataacgat aaagaaatgg
    26461 cagaaaaact tggacttcct atattctcta ggattgattt aaaaatagaa tttcaaaatt
    26521 taactgatag cgaattgctt cacataattg ataatatatt tgaaaatgta atttctagat
    26581 tatcagaaga agaaaaaaat attatagaaa attctggatt aagagaaact tatagaaaac
    26641 atgtaggttc ttttgaaaat ataagaatgc ttaaaagttt tatagagaaa gatatttttc
    26701 aaataatttt cgaagaattg cttagaaaaa atagtagttt gacataaata tatttccgag
    26761 agcgttcagc tctctttttt cttactctca tttttcatac tgtgataact tttccaaatc
    26821 atccctgtta tccttatatc attcctaaga aaatcaagtc ttgattttct actgggggtt
    26881 tgggggcgaa gccaccaagt tatcttatcg ttggctgtca aaactggaag gtttttgtca
    26941 gctggcgata tgattttttg ggtattgtga ccacaatgcc tgagctcgca aagaccgaac
    27001 aagaagagag tgaggtcttt aggaagcgta ctgacaatgt gaggcagcct gacattgtca
    27061 gacaagtata atgttgaaag gatagtagga tgggacaaga aattaagtta atccgtaagc
    27121 aatttaggat cacgagacaa gaagaaaaac agataaaaga aatgatgagg gaacaaaaac
    27181 tggatagttt ctcagaattt cttcgtcaaa atttattgaa aaagaattat caggatagaa
    27241 tttttgaaag ttggttttcc ctttggcaat ctcaaaagtt tgaacaaatt agtcgagatg
    27301 tgcatgaagt tctagttgtc gcaagagaaa atcaccaagt aactcaagaa cacgtttcaa
    27361 tcttattgac ctgcgttcaa gaattgattg cggaagtcaa tcaagtacag ccgctcagtc
    27421 gtaggtttcg tgaaaaatat atgagatagg gggctactat ggtttatcgt tatcgtacca
    27481 atctcaaaaa agtatttcta actgattcag agttacatca attgaatgag cgaatcgaca
    27541 agagtcactg tcaaaatttt tcagtctatg ccagaaaagt tttgcttaat cccaatatgt
    27601 catttgtcac cattaacact gatacctatg accagttagt atttgaattg agacggattg
    27661 gaaataacat taatcaaatt gcgcgtgcca ttaatcaaag tcatctgatt tctcaagaac
    27721 agttacaaga attaagtaag ggagttagtg agttgattac tggagtggag aaagaatttc
    27781 aagtggaagt gaaaagactg agggagtttc atggtagtca ctaagcactt tgcaacgcac
    27841 gggaaaaaat accgtaggcg tctgattaag tatatcctca atcccggtaa aacggacaat
    27901 ttgaaattgg tatctgattt tggcatgagc aattacttag actttcctag ctatgaagaa
    27961 atggtagaaa tgtacaatgt caactttacc aataacgaca agttgtacga atccagaaat
    28021 aaccgacaag aaaaacatca acaaaatatc catgcccatc acctcattca atcattttct
    28081 cctgaagata atctgacacc tgaagaaatt aaccgtattg gttatgatac catgatggaa
    28141 ttaacaggag gtcgctttaa gtttatcgta gcgactcata cagacaaaga tcatgttcat
    28201 aatcacatcc taatcaacgc cattgaccgt aattcagata aaaagttgat atggaattat
    28261 gccttggaac gaaaccttcg tatgatttca gaccgaattt ctaagattgc tggagcgaaa
    28321 attattgaaa aacgtttctc ctaccgtgac tatcaaaaat ataggcagtc tagtcataaa
    28381 tttgaattga agcaacgtct ttattttttg atgcagcact caaagtcctt tgatgatttt
    28441 ttagaaaaag cggtgcagtt acatgttcat attgatttta gtcagaagca tagtcgattc
    28501 atgatgacag atagagctat gacaaagcca attcgaggac gccaactcag taaacgagat
    28561 ttatatgatg aagaattttt tcgtacatat tttgccaagc aagagattga aagtcgatta
    28621 gaatttcttt tggggcgtgt caattcttta gaagcattac tgacaaaagc gaaagaattg
    28681 aatctaacca ttgacttgaa acaaaaaaat gttgtcttta ctcttgaaga aaatggcaag
    28741 cagataagtc tgagtcataa aaaaataagt gagaaaaagt tgtatgatgc tgcctttttt
    28801 cagaattatt ttgaagataa ggagttggtt tcctcagaag tagttgaaag tcttcgagaa
    28861 caatatcatg cttttcaaga agaacgtgat aaggagaagg tagccactga agacattgag
    28921 gaagcctttg aggaatttaa gaagaagcga gatgccgttc atgagtttga agcggagctt
    28981 gcagaacacc aaattgagaa gttagttgat gaggggattt atatcaaggt gtcttttggt
    29041 attaagcaga gtggccttgt tttcattccc aactatcaac tagacattat tgaagaagac
    29101 aatcagaaaa aatataaagt ttatattcgt gagacaactt catactttgt ctataaccaa
    29161 gaatattcgg ataagaatca gtacatcaag gggcaaactt tgattagaca gttgaccaac
    29221 gatagtcgga agattccata cagacgacca actattgaaa aacttcaaga aaaaatttct
    29281 gagattaact ttttgattga gttgaccgag acagataaaa aatatcaaga tattaaagac
    29341 gaactggtcg caggaatagc agaactagac atagtattaa atcaaaccaa tgaaaaaatc
    29401 gccaccttaa acaagatggc ggaagtgctt atcaatttga agagtgatga tccgagcagt
    29461 cgaaaactag caaggtatga attttcaaaa ctaaatttaa cagaattaat tacactagaa
    29521 caagtgaccg aagaaataag agtattgcag gaggaactcg gtcattatct tgatgagtat
    29581 gagggattag taaaaaagct agaaatgttt gtaaaagtac tgaatgataa ggattttgat
    29641 aaaaaattta gtatagaaat actattggaa taacaagaac taatcctatg gtggttaaag
    29701 attaactatc tttatgctat tgattaatat atttgtcata gtgctcttgg tactgtgctt
    29761 ttatattatg ttctcctaga atttcaaata cctgaagtgc ttttttcatc ttttcgattc
    29821 cgttcgcagg attgcactta aattcaaaat atccacatgt atataagaag acggtttgtt
    29881 cataatagtt taattcatta tttagtaatt tttttacttc tttgattaga aaattacaat
    29941 tttgaaattc ttctttatca atactaacaa ttaggcaatt gattgccaat tgtgtaacaa
    30001 gccgtttatt tgtcttattc aatgttgaat agacataatt ttttaacat
//
LOCUS       DASFQD010000011        28675 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.011, whole genome shotgun sequence.
ACCESSION   DASFQD010000011 DASFQD010000000
VERSION     DASFQD010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 28675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28675
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.011"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(431..1279)
                     /locus_tag="U1021_000391"
     CDS             complement(431..1279)
                     /locus_tag="U1021_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase"
                     /protein_id="HEM4710976.1"
                     /translation="MTVIDGKALGVKLQAALAEKTARLKEEKGLVPGLVVILVGENPA
                     SQVYVRNKERSALAAGFKSEVIRVPDTITESDLLDLIERYNQDDEWHGILVQLPLPAH
                     ISEEKVLLAIDPDKDVDGFHPTNMGKFWSGHPVMIPSTPAGIMEMFKEYQIELEGKSA
                     LVIGRSNIVGKPMAQLLLDANATVTIAHSRTKNLPELARQADILVVAIGSGHFVTKEF
                     VKPGAVVIDVGMNRDENGKLIGDVKYDEVSEVASYITPVPGGVGPMTITMLMEQTYEA
                     CVRSAK"
     gene            complement(1409..2143)
                     /locus_tag="U1021_000392"
     CDS             complement(1409..2143)
                     /locus_tag="U1021_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019805208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM4710977.1"
                     /translation="MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGK
                     STFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMREKMGMVFQQFNLFPNMTVLDNI
                     TLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
                     VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVI
                     VEDGTPEEVFEHTKEERTKDFLSKVL"
     gene            complement(2136..2825)
                     /locus_tag="U1021_000393"
     CDS             complement(2136..2825)
                     /locus_tag="U1021_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM4710978.1"
                     /translation="MNFSFLPEYWAYFNYGAIVTLIIAFFSVFFGSILGVLLAFAQRS
                     KYKVLAWTANIYVWIFRGTPMIVQIMIAFAMTHFVAPTFQLGILTVDLTRLIPGIIVI
                     SMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKQAMRYVIMPQAIKNILPALGNEF
                     VTIVKDSSLLSTIGVMELWNGAQTVQSTSYIPLTPLVFAASYYLIMTTVLTVIIQSFE
                     KKLNKGGQFHV"
     gene            complement(2950..3180)
                     /locus_tag="U1021_000394"
     CDS             complement(2950..3180)
                     /locus_tag="U1021_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005592360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1797 family protein"
                     /protein_id="HEM4710979.1"
                     /translation="MESHLVRIINRLEAMANDGGTLKRNFERDGIVVAEVAYSYDEEN
                     GSVFTLRDVAARETYAFDSIDLIAMEIYELLY"
     gene            3404..5632
                     /locus_tag="U1021_000395"
     CDS             3404..5632
                     /locus_tag="U1021_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEM4710980.1"
                     /translation="MLCKNCNINDATIHLYTNLNGKQQQVDLCHNCYQIMKTDPNNAI
                     LRGLGDLTNPNNMDPFSEFFNHLGGYPGNTPAGKNREQTPPTQASGHNGRGGHTPPPQ
                     QPQQPNGLLEEFGINVTEIARRGDIDPVIGRDQEITRVIEILNRRTKNNPVLIGEPGV
                     GKTAVVEGLAQKIVDGDVPQKLRDKEVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRN
                     RREIILFIDEIHEIVGAGSAGDGNMDAGNILKPALARGEMQLVGATTLNEYRIIEKDA
                     ALERRMQPVKVEEPSVEETITILKGIQNKYQDYHHVKYSDAAIEAAAVLSNRYIQDRF
                     LPDKAIDLLDEAGSKMNLTLNFIDPKEIDQRLIDAENRKAQATRDEDYEKAAYFRDQI
                     AKYKEMQKATISEEDIPLITEKEIEAIVEQKTNIPVGDLKEKEQSQLVNLASDLKAHV
                     IGQDEAVDKIAKAIRRNRVGLGAPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADS
                     MIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPYSLILLDEVEKAHPDV
                     MHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGAAMEGRTQSVLG
                     QLSNFFTPEFMNRFDGIIEFQPLSKENLLEIVSLMLDDVNKRLSHNGISLHVTDKVKE
                     KLVDLGYDPKMGARPLRRTIQDQIEDAITDFYLEHPAEKDLRAVMSSKGTIQIKAQTK
                     TK"
     gene            5818..6279
                     /locus_tag="U1021_000396"
     CDS             5818..6279
                     /locus_tag="U1021_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM4710981.1"
                     /translation="MEKIAVFGEKKAGVSYQSRFGVYAVIPDEKKEQIILVQAPNGAW
                     FLPGGEIEKGENHLIALERELMEELGFTAEIGKYFGQADEYFYSSHRDTHFYNPAYIY
                     EVTSYHQIGQPLEDFNHIAWFPVNEAIDKLKRGSHKWGIEQWKLQENSFNN"
     gene            6334..6642
                     /locus_tag="U1021_000397"
     CDS             6334..6642
                     /locus_tag="U1021_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1827 family protein"
                     /protein_id="HEM4710982.1"
                     /translation="MKIINTTNSHPNLVQSQLANTDAFLVETYSAGNTDVIFTQAPRH
                     YELLISNKYRAVQQNEIEQIRDFFLHRKIDERTINKAAIQTIHTDRLIEMSIPIIAEV
                     "
     gene            complement(7024..9813)
                     /locus_tag="U1021_000398"
     CDS             complement(7024..9813)
                     /locus_tag="U1021_000398"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEM4710983.1"
                     /translation="MKLKETLNLGKTAFPMRAGLPTREPEWQKAWDEANLYARRQELN
                     EGKPAFHLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPFVPGWDTHGLPIE
                     QVLAKQGVKRKEMDLVEYLEMCRDYALSQVDKQRDDFKRLGVSADWENPYITLTKDYE
                     AAQIRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIEYHDIDSTSLYYANKVKDGK
                     GLLDTDSYIVVWTTTPFTVTASRGLTMGADIDYVLVQPAGSDRKYVLAEALVDSLAAK
                     FGWESFEVISKHKGAEFEYIVTEHPWDTEVDELVILGDHVTTDSGTGIVHTAPGFGED
                     DYNVGVKYDLEVAVTVNERGLMNEATGPDFEGQFYDKVVPTVKEKLGDLLLASEVINH
                     SYPFDWRTKKPIIWRAVPQWFASVSKFRQEILDQIEATTFIPAWGKTRLYNMIRDRGD
                     WVISRQRAWGVPLPIFYAEDGTAIMTKEVTDHVAALFEEHGSIIWWKSDAKDLLPAGF
                     THPGSPNGEFTKETDIMDVWFDSGSSWNGVMNARENLAYPADLYLEGSDQYRGWFNSS
                     LITSVAVNGHAPYKAVLSQGFVLDGKGMKMSKSLGNTILPSDVEKQFGAEILRLWVTS
                     VDTSNDVRVSMDILGQVSETYRKIRNTLRFLIANTSDFNPASDAVAYEELRSVDQYLL
                     VKFNKLVAQIREAYDNYDFMGIYKSVVNFVTLDLSAFYLDFAKDVVYIDGAKSLSRRQ
                     MQTVFYDILVKITKLLTPILPHTAEEIWSYLEHEAEEFVQLAEMPEVETYANEAQLLA
                     DWENFMNFRTQAQKALEEARNEKVIGKSLEAHLTAYVSAETKSFLESLNADIAQLLIV
                     SNLTVTTETAPESAVLVEEVAFTVERARGEVCDRCRRIDTSVVERSYGATICDHCASV
                     VEENFAEAVAQGFEA"
     gene            complement(9824..10267)
                     /locus_tag="U1021_000399"
     CDS             complement(9824..10267)
                     /locus_tag="U1021_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4710984.1"
                     /translation="MIRLELVNKDNFEAVLQVQLAPEDQRRVASVEYSLAQAWLYKDS
                     GMILPYAVVSGRKVVGFAMLSIEPKDNSYYLWRLLIDKDFQNRGCGKEVVQQMIGKAK
                     ADPLCHKISINYVIGNHKMRYILEKFGFQPVGLDGQEMKMELIIK"
     gene            complement(10498..11187)
                     /locus_tag="U1021_000400"
     CDS             complement(10498..11187)
                     /locus_tag="U1021_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HEM4710985.1"
                     /translation="MALTALELKDKTFATKFRGYDADEVDDFLDIVTRDYEDLIRKNH
                     DQELELKNLRERLAYFDEMKESLSKSVLLAQDTAEKVKVAAEDQAANIIKQADYDAAT
                     LLHEAKDKANEILRNATDNAKKVVIETEELKNQTRIFHQRLKSTVESQLSLVNSSEWE
                     EILRPTASYIQTSDEAFRDVLHKALDEELPVEEESLDYTRQLTPEEIAELTRQAAAFE
                     SGESVVLSIEE"
     gene            complement(11196..11987)
                     /locus_tag="U1021_000401"
     CDS             complement(11196..11987)
                     /locus_tag="U1021_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEM4710986.1"
                     /translation="MKNDKNLLQHFSREEREFVEKIMDMCQQVEDTYSYRLTHFLHPR
                     QDEIVCKIANYYQLQTFSSRYFVSTEHSRVIIAPAYYELDIKDFELTALHLSYARKFH
                     TLSHSQVLGTFLNRLGIKREYLGDILIDDERLIVFIDQKFGQIALQSITKVARVPVKG
                     KEEEWTTVRLPIGQEWRSKDVLVSSMRLDKLISVAFNLSRGTANKLIEAGHVKLDYVL
                     TEQTSKLVEIGQLISVRRYGRVRLNEFLGFSKQGKIKLKLDIVKT"
     gene            complement(11990..12253)
                     /locus_tag="U1021_000402"
     CDS             complement(11990..12253)
                     /locus_tag="U1021_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEM4710987.1"
                     /translation="MQILIFLLLKIVEIYSYLLLAYALLSWFPSLYTSSIGRLIQWLV
                     APILKPFKRFNLQFMGLDWTVMAAMIALNMGTRFLVQLLLLLA"
     gene            complement(12258..12827)
                     /gene="sepF"
                     /locus_tag="U1021_000403"
     CDS             complement(12258..12827)
                     /gene="sepF"
                     /locus_tag="U1021_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein SepF"
                     /protein_id="HEM4710988.1"
                     /translation="MALKDTFKNLFNYFEVDEVNEVEEQADAYSMPNDRPKMRVANTT
                     AAPVREQQPKVETRREARSESQLQRLHERQQELMTNNNEKEIVKTTIDIKFPKRYEDA
                     PEMVNLLLDNASILIDFQYMSEQQARRCLDYLDGARSVLSGNLKKVSNTMWLLTPVNV
                     TVNIEELRNANAGTTTGAADSNFDFDIKR"
     gene            complement(12844..13515)
                     /locus_tag="U1021_000404"
     CDS             complement(12844..13515)
                     /locus_tag="U1021_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEM4710989.1"
                     /translation="MNFQKNKDAIFSAVSKAAEKAGRPSESVKVIAVTKYVDSSIANQ
                     LVNTGITHIGENRVDQFLEKYNALADKQLTWHLIGTLQRRKVKDIIPFVDYFHALDSV
                     KLAQEIDKRATKIVKCFLQVNVSGEESKHGFAVSEIDAALAEISLLENIELVGLMTMA
                     PIDATDAELDEIFSKMQEIQEELATRNLPRMPFTELSMGMSGDFERAIAHGATYVRIG
                     SAFFE"
     gene            complement(13522..14751)
                     /gene="ftsZ"
                     /locus_tag="U1021_000405"
     CDS             complement(13522..14751)
                     /gene="ftsZ"
                     /locus_tag="U1021_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002263818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEM4710990.1"
                     /translation="MAFSFEAAASHGAVIKVIGVGGGGGNAINRMIEEGVAGVEFIAA
                     NTDVQALSSSKAETVIQLGPKLTRGLGAGGQPEVGRKAAEESEEALTNVLTGADMVFI
                     TAGMGGGSGTGAAPVIARIAKNLGALTVAVVTRPFGFEGNKRGNFAIEGIEGLREQVD
                     TLLIISNNNLLEIVDKKTPLLEALSEADNVLRQGVQGITDLITNPGLINLDFADVKTV
                     MENKGNALMGIGIGTGEDRVIEAARKAIYSPLLETTIDGAEDVIVNVTGGYDMTLTEA
                     EDASEIVNQAAGQGVNIWLGTSIDETMKDEIRVTVVATGVRQDTADKPARHRTEAVSP
                     RPSQRFDHSVASAPTRGAAQQTEAPKASAFGEWNLRRENLIRPTDTEPTSTVSVEKFT
                     MDQDEEELDTPPFFRNR"
     gene            complement(14777..16156)
                     /gene="ftsA"
                     /locus_tag="U1021_000406"
     CDS             complement(14777..16156)
                     /gene="ftsA"
                     /locus_tag="U1021_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEM4710991.1"
                     /translation="MARNGFFTGLDIGTSSVKVLVAEYIDNEMNVIGVSNVKSAGVKD
                     GIIVNIEVAAGAIKKAIEQAEEKSGIRIEKVNVGLPANLLQIEPTQGMIPVTTDSQEI
                     TDLDVENVVKSALTKSMTPEREVISFIPEEFTVDGFQGIKDPRGMMGIRLEMRGMLYT
                     GPRTILHNLRKTVERAGVQVENIVISPLALTRSVLNEGEREFGATVIDLGGGQTTVAV
                     MRGQELQYTNIYQEGGDYITNDISKVLTTSKSIAENLKYNYGIAYPQDASDKEKFTVE
                     VIGENAPVEVTERYLSEVIAARLRQIFDRVKQDLERTRALDLPGGIVIVGGGAILPGI
                     TELAQEVFGVNTKLFVPNQIGIRNPAFASVISFVEYVGELEDVENIAQHAVNGETTLR
                     HKPVEIPVARPRISQPIQREIVNELNTVDQVEEQVAPTYHDEEEEVRPAAKGNITDRI
                     RGLFGSMFE"
     gene            complement(16309..17403)
                     /locus_tag="U1021_000407"
     CDS             complement(16309..17403)
                     /locus_tag="U1021_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HEM4710992.1"
                     /translation="MTEKDSNVEESVLEVEQASQVELDSEQISPAEKESVLAEEKGLS
                     TDVSTDVDIPEMTAPDDEKSAFFEQWKARHQAYLAHKDAAEIQAVDEGQTEQENPEAK
                     KSKRVLFQGIERKTESLKSKKETGEKVQTLKVDIPSKVVWKAIPVLVTSLLLAALALY
                     FISPTSKKKQIEVVGNERLTAEQVENYSLISPDDYNVTVALHADAYAKNIKKNSSSVE
                     TATIKFQFPATFTIHIKEYAIIGYIQQQSQWYPVLSSGEIGGEPISQDSMPEGYTTIN
                     LSDKELIKELAIELGKIDTGIRSAIQTINLTPSKVTADLLTLNMADGNTVLVPLSEIS
                     QKLPYYTKIAAEVTVPTTIDMEVGIYRYAS"
     gene            complement(17409..18473)
                     /locus_tag="U1021_000408"
     CDS             complement(17409..18473)
                     /locus_tag="U1021_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--N-acetylmuramyl-
                     (pentapeptide) pyrophosphoryl-undecaprenol
                     N-acetylglucosamine transferase"
                     /protein_id="HEM4710993.1"
                     /translation="MKKIVFTGGGTVGHVTLNLLLIPRFLEEGWEVHYIGDGNGIEHE
                     QVVKSGLDVHFHSISTGKLRRYFSFQNMLDVFKVGFGVLQSVAIIAKIRPQALFSKGG
                     FVSVPPVIAANLLRVPVFIHESDLTMGLANKIAYKFATTMYSTFEQPASLTKVKHVGA
                     VTKVGKTNDKVTPIQLPEILSHFDKSLPTLLFVGGSGGAKVFNDLISQNSAALTERFN
                     IINLTGDSSLNQLDKNLYRVDYVTELYQPLMDLADVVITRGGSNTLFELIAMQQLHLI
                     VPLGRQASRGDQIENALYAEKKGYSKQIDESQLTFASLLVEVDELLKNKEFYIQNMTN
                     SNEIQSVDSFYNLLREDMGR"
     gene            complement(18476..19825)
                     /locus_tag="U1021_000409"
     CDS             complement(18476..19825)
                     /locus_tag="U1021_000409"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000862950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEM4710994.1"
                     /translation="MKMIDIVKNKKVLVLGLAKSGESAARLLDKLSAIVTVNDGKPFE
                     ENPTAQSLLEDGIRVICGSHPLELLDEDFALMVKNPGIRYDNPMVEKAIGKGIPVWTE
                     VELAYLVSDAPIVGITGSNGKTTTTTMIAEVLNAGNKPAKLCGNIGYPASSVAQTATA
                     EDTLVMELSSFQLMGTESFRPHIAVVTNLIASHIDYHGTFEDYVAAKWMIQGQMAAED
                     FVVLNFNQKEAKELAGQTKATVVPFSTLEVVDGAYLADEKLYFKGEYIMDADQIGVPG
                     SHNVENALATIVVAKLLGVDHQAIQESLSAFGGVKHRLQFVGEVNEVSFYNDSKSTNI
                     LATQKALSGFDNSKVILIAGGLDRGNEFDELVPDLVGLKKMVLLGQSAPRVQRAADKA
                     EVGTIEALDIADATRKAFAIAEKGDIVLLSPANASWDMYANFEVRGDVFLQTFEELK"
     gene            19996..20273
                     /locus_tag="U1021_000410"
                     /pseudo
     CDS             19996..20273
                     /locus_tag="U1021_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000018958.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS982 family transposase"
     gene            complement(20387..21256)
                     /locus_tag="U1021_000411"
     CDS             complement(20387..21256)
                     /locus_tag="U1021_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class C sortase"
                     /protein_id="HEM4710995.1"
                     /translation="MIKWLKKKGPSFIMPLIFILGIGLLAYPSVSDYWNSFHQSEAIM
                     SYSDTVSDMTADQYKEIIDSARQYNQEKPLNWNVTASDIEAYNQELNFNKDGIMGYIE
                     IPKIDVKLSIFHGTDETVLETSIGHLEGTSLPVGGLGTHSVLSGHRGLPSARLFSDLD
                     KLREGDIFTIHVLNETLTYKVDQIRVVEPSDLSALTIEPQKDLLTLVTCTPYGINTHR
                     LLVRGYRIENVNGSALVTSDAIQIKAIFIAPFIATPILFVILIYIFITTSKTFRSWNR
                     NQVLDDFLVPKKF"
     gene            complement(21370..22806)
                     /locus_tag="U1021_000412"
     CDS             complement(21370..22806)
                     /locus_tag="U1021_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpaH/EbpB family LPXTG-anchored major pilin"
                     /protein_id="HEM4710996.1"
                     /translation="MNKLKSLFMTVLAVLAMVLPTPFASAQEVNTNAGGTGKITVRNA
                     SQSQKYTIYKLFDATVTEDGSGISYKVPTGKILPADNPYFAVDSKGNITAKEGATVSS
                     EAFAAWAKNFGTEVTSATANDNSLVFTHLTFGYYFVTSSLGAVLTVDSTTPNATVIDK
                     NTTNPTIPDSNNGGGKKILSNGATTSETTAKIGDTINFQIKFNATNYVTKDRQTKQIV
                     SYAIEDSPTALAIDQNSVNVKVDGVDITAKISKTFDATGKMNLVLTWADAAASNKTIY
                     NSPAEVIITYSAVVTKDAKEGEATNSATIGYNTIDNPTTPPTPVDPDKPTETTKVTTH
                     RFTLKKTNNVGETLTGAEFKLYDAANNGTEIKVVKESDGVYRVAQADEQGVVIEAGEV
                     VIKGLKHSTTYYLEEMKAPNGYNILTERQSIEVKENNTAQANIVNKKGGVLPSTGAIG
                     TTLFYLVGSILLLVALVYTISKRRMNNI"
     gene            complement(22907..27907)
                     /locus_tag="U1021_000413"
     CDS             complement(22907..27907)
                     /locus_tag="U1021_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018164816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="InlB B-repeat-containing protein"
                     /protein_id="HEM4710997.1"
                     /translation="MQNNFKFKRLSLWQKKYRKFVNFVAVVVVFVTTYALILPALTLE
                     SNKASQLSGISSSETTTEIQGNEETPVEVTEAASQMVEESSAIEQTSMTTSVTSTTEL
                     SSEPQTTETTKVDQQVITEATEFIHKGKDYEVIARFDASAKMPKGVELKVKEIEAGTD
                     TYKSRFNKAKATLGARALTFARFFDISFVHDGKEIQPEAPISIQIKTDSNIKLKEETK
                     VEAVHFQSANKAEIVPEVETNEENNQVSEISFDADSFSDYGVVGAEYYKVTFVALDSN
                     GQEQTVSSLVDKKEGAKLETLPEEPFRAGYRFIGWRDKETNKIVTADTLVTRDMIVEA
                     EFASISIYKVTIQYFYNNVTSGQKVTFETEVYELEAEDMPYRITTPVSTEIKSGAESG
                     LVTDAIYYTSRPIIDIQSEDLARLDEEDGNVDHTLTIKVAYIPYNSEYKVHYKLKDLD
                     GTGYTDIETGTYYGIIGSTIRPEVRNYSYANFEKTDSLELTKSSGQEIDVYYTRKEYT
                     LSYNTNGGSYLPPQTGLYNAKVNLTTTIPTREGYTFDGWYDNANLTGSPISGSVTLDK
                     NKTLYAKWKADTVKYTIAYYKEVYNNSTGQTDYAYDSSINATGQVGTIIQASTAPEIS
                     SRPPIGYEKETAYGKNSTSSIVVAADGSSTLKVYYSLIRYTLTFDINRNSTSRFYTYY
                     GQIEKGGSTYTGTQYKIRDVVVGQDILNLWPSGGDEVYQMLRIGNGTPGKDDSMKFRG
                     WTFSDSNSYNVTRRPTLTTDMITTANANHEVVVTGHWESSLKTKRVDYYLQSADNPNV
                     YVLSEHSQSLNGGQNSPLNAKTIMGYQVIPTVPAGYDNHSGPYATLNNGIILYDHYRF
                     YYNRDSFKIDYYYGSTKLKDPENVLFDANINSAIYNYTPSRPAGVDADYTWGGWYTDS
                     NLTEAYTFDKMPSNNLVLYAKWVAPNMTVSFDLNGGEGTAPESQTVEKKKIATVVADP
                     TRAHYDFDGWFTAKEGGERYVWSKPVTENITLYARWKPQPLKYMVKYVDATTNKSLAA
                     DKVIESPALELHQAIKENALAITGYRPDASSKTLDLTYDNNEIVFYYSDRTSKIPYTV
                     RYLLKDGDNDDSNNTVLLPEDHLEADANMIVAKAVAKGVGTGYYPQNNVLSLTLTTNS
                     ANNIITFYYLPYEFATLTVNYLDMDGNPIAGQDPLVEYKKKGDTYILNRKEIQGYTFS
                     TSKDNENNVDKSIYRIRRPDKRTINLYYKKNLTLEGQPREKVYDDEPLKLSGIDDLKS
                     GYSTSLASGDRLTAIDFEGSQTDVGSSNAKPKSAVITTADGKNHTDYYEITYLDSSLT
                     VKKRPVTVEIGSQTIEKIYDGKVSTVDYKVNSISDSLYKESDIHYTGSEIEMTQKDVG
                     TYTFALQNKFVNTNDNFEVTFLAKDGKITINPRKLMLTSATKEKAYDGTELTAQEVSM
                     TTPEGASYDGFVQGEGVDFSDFASLTNPGRRTNSFTYKAKEGTNLSNYEITDEFGMLT
                     ILETLNITKTDENWKSLAGGKFELTKWDGLNWAQVDGVQEFAITSKDGIRIPVGLEAG
                     RYRLQELAAPDGFIVLDSYIYFSIKENFNEDKTSSFYTVALSDEAGNDASPERATLTK
                     VSGDASHRIQVANEQGRALPSTGGDGQKWFILSGLVLIVISYLMHLFVQRNREKRS"
     gene            complement(27957..28547)
                     /gene="lepB"
                     /locus_tag="U1021_000414"
     CDS             complement(27957..28547)
                     /gene="lepB"
                     /locus_tag="U1021_000414"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEM4710998.1"
                     /translation="MNSSNLKGKELPKTSELKELYQHERYRHTFWRTVKSTVFMLVVV
                     AAFAILIAVLFLPILRIYGDSMKGTLNSGDIVVSVKSNDFESSDVVAFYYNNNILVKR
                     VIAEAGDWVDMDKQGNVYVNNQRLDEPYLANRDYGHTDIEFPYQVPENRIFVMGDNRK
                     ESIDSRNNAIGTVSNEQIVGKLVFRVWPLREMGVID"
BASE COUNT         8332 a         6433 c         5112 g         8798 t
ORIGIN      
        1 aacctgatca cacgatcggg cttttcagga gattatgaaa aatatttagg attgggtata
       61 gtataaccaa tattactaaa agtcatatcc gtcttaagac tgatttattg aatatgacca
      121 ataaaataag tagagtcgtt taaaaataga cttatccata cgaggactgc actcattact
      181 gttagctacc aaaactacaa gcataattta agaacctgta ttcacagttc aacgcttcta
      241 ttctaaggct agtttttaag ctactcatca ttagtttttt tcaaaataca attaatatcc
      301 cctcaaaaaa ttatcttgat tagctaaatc tgtctcttaa tatgagtact tcgcttgtaa
      361 atacaggttc taagaagaga gctttaccaa agcaggcatg gatatattta tttttattaa
      421 actctctatc ttattttgca cttctgacac aagcttcata ggtctgttcc atcaacatgg
      481 taatagtcat cggaccaaca ccacctggaa ctggggtaat ataactcgcc acttctgata
      541 cctcatcgta tttgacatca ccgattagct tgccattttc atcacgattc ataccaacat
      601 caatcaccac ggcacctggc ttaacaaatt ccttagtcac aaaatgacca ctaccaatag
      661 caacaacaag aatatcggcc tgacgagcaa gctctggcaa gtttttggta cgagaatgcg
      721 caatcgttac agtagcattg gcatccaata acagctgtgc catcggttta ccaacaatat
      781 tagaacgacc aataactaaa gctgacttcc cttccagctc aatctgatat tccttgaaca
      841 tttccataat tcctgctggg gtagatggaa tcataacagg atgacctgac cagaatttcc
      901 ccatgttagt cggatgaaaa ccatccacat ccttatctgg gtcaatggcc aacaagacct
      961 tctcctcgct gatgtgggct ggtaagggca attgcaccaa aataccatgc cattcatcat
     1021 cctgattata gcgctcaatc aaatccaaca agtctgactc agtaatcgta tctggaacgc
     1081 gaataacctc actcttgaat ccagcagcta gagctgaccg ctccttattc cgtacataga
     1141 cctgactagc aggattttcg ccaactaaaa taactacaag acctggtacc aacccctttt
     1201 cttcttttaa tcgagcagtt ttctccgcca aagcagcctg caattttaca cctagtgctt
     1261 tcccatcaat gactgtcata cctacactcc ttttgttttt tctattatac cctaaaattc
     1321 tccgactgac tatacttgta caaagtagac tatagcatat agcaaaaaac tccgaacaat
     1381 gtcggagtcg tacttatttg ttcatttatt acaagacctt agacaagaaa tccttggtcc
     1441 gttcttcctt ggtatgttca aagacttctt caggcgttcc atcctccacg atgacaccgc
     1501 catccataaa gataaccctg tcagctacct cacgcgcaaa tcccatctca tgagtcacga
     1561 taaccatggt catccctgac ttggccaaat cctgcattac agcaagaact tcaccaacca
     1621 tttcagggtc tagtgcagag gtcggttcat caaaaagtag gacatctggg tccatggcca
     1681 gaccacgtgc aatagcaatc cgttgttgct gaccacctga aaggctttgt ggataggcat
     1741 tcgccttatc tggcaatcct accttttcaa gtaattcctt agccttcttc tcagcctcat
     1801 cctttgcgat tccctttgtc ttaataggtg ataaagtaat attatctaat accgtcatat
     1861 tcggaaaaag attgaactgt tgaaaaacca ttcccatctt ttcacgcatc ttgaaaatat
     1921 catttgactt gtcagtaata tcaacacctt caaatgtaac agttcccttg gttggcactt
     1981 ctaagaggtt cattgtacgt aagaaagtcg atttccctga ccctgatgga ccgataataa
     2041 cgaccacctg accttgttga atatctaaat caattccttt tagaacctca ttctttccga
     2101 agtacttatg taaatccttg atagaaataa tcgcattaga catggaactg ccctcccttg
     2161 ttcaactttt tctcaaacga ctgaataatc actgttagca ccgttgtcat aattagataa
     2221 tagctcgctg caaatacaag tggtgttaaa ggaatataag aagtggattg aactgtctga
     2281 gcaccgttcc ataattccat cacaccaatg gttgacaaaa gtgaactatc cttaacaata
     2341 gtcacaaatt catttcccaa ggctggaaga atattcttga tagcctgtgg catgataacg
     2401 taacgcatcg cctgctttgg tctaatacca agcgaataag ctgcttccag ctgtcctttt
     2461 ggtacagcat taataccggc acgaacagtt tcagatacat aggcacccga gttcatcgaa
     2521 ataacaatga tacctggaat caagcgcgtc aaatcaaccg tcaaaattcc tagctgaaaa
     2581 gttggtgcta caaaatgtgt catcgcaaaa gcaatcataa tctggacaat catcggtgtc
     2641 ccacggaaaa tccagacata gatattggca gtccaagcta aaactttata cttactacgc
     2701 tgagcaaagg caagcaacac acctaaaata ctaccaaaaa atactgagaa aaatgcaata
     2761 atgagggtaa caattgcccc ataattaaaa taagcccaat actcaggcaa aaaagaaaaa
     2821 ttcatcatct tactccaatt ctgtcattta gagtctatta taccattttt gaatatttat
     2881 gcaatatttt tatttataat attcaattta cacaagaaaa aagcaccctt aggtgcctct
     2941 cacttcttct tagtacaata gctcatagat ttccattgca atcaagtcga tgctgtcaaa
     3001 cgcgtacgtt tcacgagcag caacatcacg caaggtaaat actgaaccat tttcctcgtc
     3061 atagctataa gccacttctg caacaacaat accatcacgt tcgaaattac gtttcaacgt
     3121 accgccgtca ttagccatag cttccagacg attgataatt ctcaccaaat gtgattccat
     3181 attcgttctc ctaatccttt ttataggaat attttaccac atattgccaa aaaagtctta
     3241 ttttttccct attttcttcc tatcgcccta tttttcatag aaagtttttc caagcgtagc
     3301 agtttcttga tttttctatg aatcttgtta taataaagct agaactgacc ttttttgact
     3361 atttaacaat aggtcacatt ttttcacaga aagaggtaga attatgctct gcaaaaattg
     3421 taatatcaac gacgcaacga tccatctcta caccaactta aacggtaaac agcagcaggt
     3481 agacctctgt cacaactgct accaaatcat gaaaacagac cctaataatg ccatcctacg
     3541 tgggttggga gatttaacaa atcctaacaa tatggatccc tttagtgaat ttttcaatca
     3601 cctaggtggc tatcctggca atacccctgc tggaaaaaat cgcgaacaga ctcctcccac
     3661 tcaagccagt gggcataatg gacgtggtgg acatacccct cctccgcaac aaccccaaca
     3721 accaaatggg ctccttgaag aatttggtat caacgttacc gaaattgccc gtcgtgggga
     3781 tattgatcca gtaatcggtc gcgatcaaga aattacccgt gtcatcgaaa ttctcaaccg
     3841 tcgtacaaaa aacaaccctg ttcttatcgg tgagcctggt gtaggtaaaa cagcggttgt
     3901 tgaaggcttg gctcaaaaaa ttgttgatgg cgatgtccca cagaaattac gagacaagga
     3961 agtcattcgt ctggatgttg tcagccttgt acaaggaaca ggtatccgcg gacaatttga
     4021 agaacgcatg caaaaactca tggaagaaat ccgtaatcgt cgcgaaatca ttcttttcat
     4081 tgacgagatt cacgaaattg tcggtgctgg ctctgcaggc gatggtaaca tggatgcagg
     4141 caatatcctc aaaccagccc tcgcacgtgg tgaaatgcaa ctagtcggtg caacaacgct
     4201 caacgagtac cgtattatcg aaaaagatgc cgccctagaa cgccgtatgc aacctgtaaa
     4261 agttgaagaa ccaagtgtcg aagaaaccat tactattctc aaaggtatcc aaaataaata
     4321 ccaggattac catcatgtta aatactccga tgctgctatc gaagctgctg cagtactgtc
     4381 caaccgctac attcaagacc gtttcctacc agacaaagct attgaccttc tggatgaagc
     4441 tggttcaaaa atgaatttga ccctcaactt tattgatcca aaggaaattg accaacgcct
     4501 gattgatgcc gaaaatcgta aagcacaagc tacacgggat gaagactatg aaaaagcggc
     4561 ctatttccgt gaccaaattg ctaagtacaa ggagatgcaa aaggcaacta tcagcgagga
     4621 agatattcca ctcattactg aaaaagaaat tgaggccatc gttgagcaaa aaacaaatat
     4681 cccagttggt gatttaaaag aaaaggaaca gtcccagctt gtgaacctcg ctagtgactt
     4741 aaaagcccat gttatcggac aagatgaggc agttgacaag atagctaaag ccatccgccg
     4801 taatcgtgtc ggtctcggtg ctccaaatcg tcccattgga tccttcctct ttgtcggacc
     4861 aacaggtgtc ggtaaaaccg aattgtctaa gcaattagct atcgaactct tcggttcggc
     4921 tgacagcatg atccgcttcg acatgtccga atacatggaa aaacacgctg tcgctaaact
     4981 cgtcggagct cctccaggct atgtaggcta tgaggaggct ggacaattga cagaaaaagt
     5041 ccgtcgtaat ccttactcac tcatcctcct tgacgaagtt gaaaaagccc acccagatgt
     5101 catgcacatg ttccttcagg tcttagacga tgggcgtctg acagatggac aaggtcgtac
     5161 tgtcagcttc aaagatacca ttatcatcat gacatcaaat gctggtactg gaaaagttga
     5221 agcaagtgtc ggttttggtg cggctatgga agggcggact caatcagttc ttggccaact
     5281 tagcaatttc ttcacacctg aatttatgaa ccgatttgac ggtattattg agttccaacc
     5341 actgagcaag gaaaacctac ttgaaatcgt cagcctcatg ctagacgatg taaacaaacg
     5401 cctttctcac aatggcatca gcctccatgt aacagataaa gttaaggaga aattagtgga
     5461 ccttggctac gatccaaaga tgggagctcg tccactacgc agaaccatcc aagatcagat
     5521 tgaagatgct atcaccgact tctacttaga acatccagca gaaaaagacc tacgtgctgt
     5581 catgtcaagt aaaggtacaa ttcaaatcaa ggcacaaaca aagacaaaat aagaaaatag
     5641 agctgctctc tacgagtagc ctattttact gttttgctac tctatttatc taaattcttc
     5701 cccatctcca tcctataaaa aaactttact ttgtaaagcc tatcacaagg aaaaataata
     5761 aaaaagtggt ataatgtata caactcattc caataatgaa agaggataga attgcctatg
     5821 gagaaaattg ctgtatttgg agaaaagaag gctggcgtca gctaccagag tcgctttggt
     5881 gtttacgcag ttatcccaga tgaaaagaaa gaacagatca tactcgttca agcaccaaac
     5941 ggagcttggt ttcttcctgg tggagaaatt gaaaagggag aaaatcacct cattgctttg
     6001 gagcgcgaat tgatggaaga gcttggattc accgctgaaa tcggaaaata ctttggtcag
     6061 gctgacgaat acttctactc tagccaccgc gatacccatt tctataatcc agcctacatc
     6121 tatgaagtaa ctagctacca tcaaatagga caaccactag aagatttcaa ccatattgct
     6181 tggttcccag tcaatgaagc catcgataaa ctcaaacgtg gtagtcacaa atggggcatt
     6241 gaacaatgga aattgcaaga aaattcattc aataactagt aaaaacactc taatcgtgct
     6301 ataatgtagc caaagagata gaggaggttc cacatgaaaa tcattaacac gacaaatagt
     6361 catcccaatc ttgtccaaag ccagttggct aatactgatg ctttcctagt agagacttat
     6421 tctgcaggta atacagacgt tattttcaca caggcacccc gtcattatga actcttgatt
     6481 agtaataaat accgtgcagt acaacaaaat gaaatcgagc aaattcgtga tttcttcctt
     6541 catcgaaaaa ttgatgaacg aactattaac aaggctgcca ttcaaacgat tcacacagac
     6601 cgtttgattg aaatgtctat tcccattatc gcagaagtgt aagaagccag atggcttctt
     6661 tcagattgaa gaaaaagtcc attttggaca attttcttca atcttttttt ctttatgttc
     6721 aaagtaaaaa aaaactctca gaaacgctga aatatcaatg tttctaagaa tttaatgact
     6781 tgctatcttt cgcaaacctc ttcaattttt tatattttta ggagtttgtc tacgttctgt
     6841 aagaagccaa ttggcttctt tttttctatt tatactcaat gaaaatcaaa agtagcctag
     6901 gaaacgaagc cgaagataga actggagttc atcaaggctc ttgacaacga ataattttga
     6961 ttttcgaaga gtattacaaa aagcctatcg ctagatagac tttaacaaat gtattgtgat
     7021 tgcttaggct tcaaaacctt gagctactgc ttcagcaaag ttttcttcca ctacgcttgc
     7081 acagtggtca cagattgtcg caccatagct acgttctaca acacttgtat caatacggcg
     7141 gcaacggtca catacttcac cacgtgcacg ctctacagtg aaggcaactt cttctaccag
     7201 aacagcactt tcaggagctg tttccgtggt tactgtcaag tttgaaacga tgagcaactg
     7261 agcaatgtct gcattcaagc tctccaagaa ggacttggtt tcagctgaga cataggcagt
     7321 caaatgagct tcaagtgact taccaatcac tttttcatta cgcgcttctt ccaaggcttt
     7381 ttgtgcctga gtacggaagt tcataaagtt ttcccaatca gccaaaagct gcgcttcatt
     7441 ggcataggtt tccacctctg gcatttccgc caattgtaca aactcttctg cttcgtgttc
     7501 caagtatgac cagatttcct ctgctgtatg tggcaagatt ggggtcaaga gcttggtaat
     7561 tttcaccaag atgtcataga aaactgtctg catctgacga cgagaaagtg atttagcacc
     7621 atcaatgtag acgacatctt tggcaaaatc gaggtagaag gctgacaaat caagggttac
     7681 aaagtttact acagatttgt agatgcccat gaaatcataa ttgtcgtagg cttcacggat
     7741 ttgagctacc aatttattga atttcaccaa gagatactgg tcaacagaac gaagctcttc
     7801 gtatgccacc gcatcacttg caggattgaa atcagaagtg ttagcaatca agaagcgaag
     7861 ggtattacgg attttacggt aggtttcaga aacctgtcca agaatatcca tagacacacg
     7921 tacgtcgttt gaagtatcca cagaagttac ccacagacgc aagatttctg caccaaattg
     7981 tttctcaaca tcacttggaa gaatggtatt gcctagagat ttagacatct tcataccttt
     8041 gccatctaag acaaaacctt gtgacaagac agctttatat ggcgcatgac catttacagc
     8101 tacagaggta atcaaggatg agttaaacca accacggtat tggtctgaac cttctaggta
     8161 gaggtctgct gggtaggcaa ggttttcacg ggcgttcatg acaccattcc aagatgaacc
     8221 agagtcaaac catacgtcca tgatgtctgt ttctttggta aattcgccat ttggtgaacc
     8281 tggatgagtg aaaccagctg gcaagagatc ttttgcatca gatttccacc agatgataga
     8341 accatgctct tcaaagagtg ctgctacatg gtctgtcact tccttggtca taatcgcggt
     8401 accatcttct gcatagaaga ttggaagcgg cacaccccaa gcacgctgac gagagatgac
     8461 ccagtcacca cggtcacgga tcatgttgta aagacgtgtt ttaccccaag caggaataaa
     8521 ggtcgttgct tcgatttggt ccaagatttc ctgacggaat ttagaaacag aggcaaacca
     8581 ctgtggcact gcacgccaga tgattggctt cttggttctc cagtcaaatg ggtaggagtg
     8641 attgatcact tcactagcaa ggagcaagtc gcctaatttt tccttaaccg ttggtacaac
     8701 cttgtcatag aattgccctt caaaatcagg acccgtagct tcattcatca agccacgttc
     8761 gttgacagtt accgcaacct ccaagtcata tttgacaccg acattgtagt catcctcacc
     8821 aaagcctgga gccgtatgga cgatacctgt accagagtcc gttgtgacat ggtcacccaa
     8881 gataaccaat tcatcaactt cagtatccca tgggtgttcg gtcacgatat attcaaattc
     8941 agcacccttg tgttttgaaa tcacttcgaa ggattcccaa ccgaatttgg ctgccaagct
     9001 atcaaccaag gcttctgcca agacatactt acggtcagag ccagcaggtt gaaccaagac
     9061 atagtcaatg tctgctccca ttgtcaaacc gcgagaagcc gttaccgtaa atggagtggt
     9121 tgtccagaca acgatgtagc tgtctgtatc caagagcccc ttgccatctt tgaccttgtt
     9181 ggcataatac agagatgttg agtcaatgtc gtggtattcg atttcagctt ctgcaagggc
     9241 agattcagat gaccatgacc agtagacagg cttagcacca cggtagatat agcccttgtc
     9301 tgccatagca ccaaagacac ggatctgagc tgcttcgtag tctttagtca aggtgatata
     9361 tggattttcc cagtctgcag aaacacccaa gcgcttgaaa tcatcacgtt gcttgtcaac
     9421 ttggctgagg gcataatcac gacacatttc aaggtattca accaagtcca tttccttgcg
     9481 tttgacacct tgttttgcca agacttgctc aataggaagg ccgtgcgtat cccaacctgg
     9541 tacaaatgga gcacggaaac cagacattga cttagagcga acgataatat ctttagaaat
     9601 cttgttcaaa gcatgcccaa cgtggatatt tccgttagcg tatggagggc catcgtggag
     9661 gtggaaggca ggcttgcctt cattgagttc ttggcgacga gcatacaagt ttgcttcatc
     9721 ccaggccttt tgccattctg gttcacgagt tggcaatcct gcacgcatag gaaatgctgt
     9781 cttacctaaa ttgagtgttt cttttagttt catcataact cctttatttt ataattaatt
     9841 ccattttcat ttcttgacca tctaaaccga caggctgaaa gccaaatttt tctaagatgt
     9901 accgcatttt atgattgcca atgacataat ttatagaaat tttatgacaa agcggatccg
     9961 ccttcgcctt tccaatcatt tgctggacga cttcctttcc gcatccacga ttttgaaaat
    10021 ccttatcaat caacaagcgc cataaataat aactattatc tttgggttcg atagataaca
    10081 ttgcaaaacc aacaactttt ctgccagata ccacagcata tggtagaatc atccccgaat
    10141 ctttatataa ccaagcttgg gctaatgaat attcaactga tgctactcgg cgttggtcct
    10201 caggtgcaag ttgaacttgt aacactgctt caaagttatc cttgtttact aattctaatc
    10261 gtatcataaa aataaaaaaa ctcccgccaa ataaggacga aagttcgtgg taccacctta
    10321 gtttagatag agtttcccct atccctctat gttcgtaacg tgaacagacg tctctcctta
    10381 ctattttcag gaaaaatcaa acaaagtgat gatccataga aagagattgt agggcttcca
    10441 ccatctccta ctcgcttaaa atatttctaa cgaccttgtc tttgcttatg atttctatta
    10501 ttcttctatt gaaagtacta cagattctcc actctcaaaa gctgctgcct gacgagttaa
    10561 ttccgcaatc tcttctggtg tcaattgacg tgtataatcc aaactttctt cttcaacagg
    10621 taattcttca tccaaagcct tatgaagaac atcacgaaag gcttcgtcac ttgtttgaat
    10681 gtaacttgct gttgggcgga ggatttcctc ccattcagat gaattaacca gtgataattg
    10741 gctttctact gttgatttca gacgctgatg gaaaatacgt gtctggtttt ttaattcttc
    10801 agtttcaatg acaacttttt tcgcgttgtc agtcgcatta cgaagaattt catttgcctt
    10861 atctttagct tcatgtaaca atgttgccgc atcatagtca gcttgtttaa taatatttgc
    10921 cgcttgatct tcagccgcaa cctttacttt ctcagctgta tcttgagcta aaagaactga
    10981 tttactcaat gattctttca tctcatcaaa ataagccaaa cgttcccgca aatttttcaa
    11041 ttctaactct tggtcatgat ttttacgaat taaatcctca taatcacgcg ttacaatatc
    11101 caaaaagtca tcaacttcat ctgcgtcgta tcctctaaat tttgtagcaa aggttttatc
    11161 ttttaattct aatgctgtaa gtgccatctt tcctcctaag ttttaacaat gtctaacttt
    11221 aattttatct tcccttgctt agaaaaacct aaaaattcat ttaggcgaac tctaccatat
    11281 ctcctaacac taattaattg ccctatttca actaatttac tggtttgttc tgtcagaaca
    11341 taatccaact tcacatgtcc agcctcaatc aacttgtttg cagttcccct tgaaagatta
    11401 aatgcgaccg aaatcaattt atccaatctc atactagaaa ccaacacatc ctttgaacgc
    11461 cattcctgtc caatcggtag tcgaacagtc gtccattctt cttcctttcc cttaacaggg
    11521 acacgagcaa ctttagtgat agattgtaag gcaatctgcc caaatttctg atcgataaag
    11581 acaatcaatc gttcatcatc aatcaaaata tcacccaaat actccctttt aatccctagt
    11641 cgattgagaa aagttccaag aacttgtgaa tgggataagg tgtgaaattt tctagcatag
    11701 gacaaatgaa gagcggttaa ctcaaagtcc ttgatgtcca actcataata agccggggca
    11761 ataataaccc gcgaatgttc agtcgaaaca aagtaccgac tagaaaacgt ttgtaactgg
    11821 tagtagttag caattttgca tacaatttca tcttgtctag gatgtaaaaa gtgagttaat
    11881 ctgtatgaat acgtatcttc aacttgctga cacatatcca ttattttctc tacaaactct
    11941 ctttcttccc tagaaaaatg ttgcaataag tttttgtcat ttttcataac tatgctaaca
    12001 gtagcaataa ttgaaccaaa aagcgtgttc ccatattaag cgcaatcatg gctgccatta
    12061 cggtccaatc caaccccata aattgtagat taaatcgctt aaagggtttt aaaatcggtg
    12121 ctaccagcca ttgaatcaaa cgaccaatcg agcttgtgta taggctagga aaccaactta
    12181 gcaaagcgta tgccaataag agataagaat aaatctctac aatttttaat agtaaaaaaa
    12241 tcaaaatttg catagcgtta ccgttttata tcaaaatcaa aatttgaatc agccgcacca
    12301 gtagttgtac cagcattagc attgcgcaat tcttcaatat tgactgtgac atttactgga
    12361 gttaatagcc acatggtatt tgagaccttt tttaaatttc cagataatac tgaacgagca
    12421 ccatccaagt agtctaggca acgtcttgct tgttgctccg acatatattg aaaatcaatg
    12481 agaatactcg cattatctaa taaaagattt accatctctg gtgcatcttc ataacgtttt
    12541 ggaaacttaa tatcaattgt agttttgaca atctcttttt cgttattatt agtcatcaat
    12601 tcttgctgcc tttcatgtag gcgttgaagt tgactttctg aacgtgcttc ccgacgcgtc
    12661 tctacttttg gctgctgttc gcgcacaggt gcagctgtag tattggcaac acgcatttta
    12721 ggacgatcat taggcattga ataggcatct gcctgttctt caacttcatt gacttcgtca
    12781 acttcaaagt aattaaataa attcttaaat gtatctttta atgccatatt ttcctcctct
    12841 ccattattca aagaatgctg agccaattct cacatatgta gctccgtgag caatggcgcg
    12901 ttcaaagtcc ccactcattc ccatacttaa ctctgtaaag ggcatacgtg gtaagttcct
    12961 tgtagctagt tcttcttgga tttcctgcat tttagaaaaa atctcgtcta attcagcatc
    13021 tgtagcatca atcggtgcca tcgtcatcaa tccaacaagt tcaatgttct ccaataaact
    13081 aatttcagca agtgccgcat caatctcaga tactgcaaag ccatgcttac tctcctcacc
    13141 ggaaacgttg acttggagga aacacttgac tattttagtc gcacgtttat ctatttcctg
    13201 agctagttta acagagtcta gggcgtggaa ataatcaaca aatggaataa tgtccttgac
    13261 ctttcttctc tgtaaagtcc ctatcaaatg ccatgtcaat tgtttgtctg ctagggcatt
    13321 atacttttct aagaactgat cgactcgatt ttctccaata tgagtaattc cagtattcac
    13381 tagctgatta gcaatagagc tgtcaacata tttggtgaca gctattacct ttactgattc
    13441 acttggacga cctgccttct cagcagcttt tgaaactgct gaaaagatag catccttatt
    13501 cttttgaaaa ttcattttag tttagcgatt acggaagaat ggtggtgtat ccaattcctc
    13561 ctcatcttga tccattgtaa atttttcgac tgaaacagtg gatgttggtt ctgtgtcagt
    13621 tggacgaatc aagttttcgc gacgcaaatt ccactctccg aaggcagaag ctttcggcgc
    13681 ttcagtttgt tgtgcagctc cacgagttgg tgctgatgct actgaatgat caaagcgttg
    13741 agaagggcgt ggtgaaacag cttccgtgcg atggcgggct ggtttatcag cagtatcttg
    13801 acgaacaccc gtagccacaa cggtcacacg aatctcatct ttcattgttt catcaataga
    13861 tgtacccaac caaatgttaa caccttgacc cgcagcctga ttaacgattt ctgaagcatc
    13921 ttctgcttct gtcagagtca tgtcatagcc acctgtaaca ttgacaatga catcctctgc
    13981 accatcaatt gttgtttcaa gaagaggaga ataaatcgct ttacgagccg cctcaatcac
    14041 tcggtcctca ccagtaccga taccgatacc catcaaggcg tttcctttgt tttccataac
    14101 tgtcttcaca tctgcaaagt ccaagttaat caaaccagga tttgtaatca agtctgtaat
    14161 tccttgaaca ccttgacgaa gaacattatc agcttcgctt agtgcttcta aaagcggtgt
    14221 tttcttatca acaatttcaa gaaggttgtt gtttgaaata attaaaagtg tatctacttg
    14281 ttcacgaaga ccttcaattc cctcaatcgc aaagtttcca cgtttatttc cttcaaaacc
    14341 aaacggacga gtcacaactg cgacagtcaa cgcacccaag tttttagcaa tacgtgcaat
    14401 aacaggagcc gcaccagtcc ctgagccacc gcccatacca gcagtgatga agaccatatc
    14461 tgcaccagtt aatacattag tcaatgcttc ttcgctttcc tcagcagctt tccgaccaac
    14521 ctcaggttga cctccagcac ccaaaccacg agtcaattta ggacctagtt ggataactgt
    14581 ttcagcttta gagctactta gcgcttgtac atctgtgttt gctgcaataa actcaacccc
    14641 agcaacacct tcttcaatca tacggttaat cgcgttcccg ccaccaccgc cgacaccgat
    14701 tactttaatg acagcaccat gactagctgc tgcttcaaat gaaaatgcca tagtttaaat
    14761 caccttttct tttctcttat tcaaacatgc tgccaaataa accacgaatg cgatctgtga
    14821 tgtttccctt agcagctgga cgaacttctt cttcctcatc atggtaagta ggagcaactt
    14881 gttcctctac ctgatcaact gtgttcaatt cgttcacgat ttctctttga attggctgac
    14941 taatccgagg acgagcaaca ggaatttcaa ctggcttatg tctcaaggta gtttcaccat
    15001 ttactgcatg ttgggcaata ttttctacat cttctaactc accaacatac tcaacaaagc
    15061 taatcacact tgcaaatgct ggattgcgga taccaatctg atttggaaca aaaagcttag
    15121 tgttaacacc aaacacttct tgggccaatt ctgtaattcc tggtaagata gcaccaccac
    15181 ctacaataac aatgcctcct ggtaaatcta gagcacgtgt acgctccaaa tcttgtttca
    15241 cacggtcaaa aatctgacgc agacgtgccg caatcacttc tgaaaggtag cgctcggtca
    15301 cttcaactgg agcgttttct ccaatcactt cgacagtgaa tttttcctta tcacttgcat
    15361 cttgcggata ggcaatgccg tagttgtatt tcaagttttc agcaatactc tttgaagttg
    15421 tcaatacttt tgaaatatcg tttgtgatat aatctccacc ttcttggtag atgtttgtgt
    15481 attgcaactc ttggccacgc ataacagcca cagtcgtttg accgccacca agatcaatga
    15541 cagtcgcacc aaactcacgt tcaccttcat tcaatacaga gcgagttagt gccaacggag
    15601 aaattacaat attttcaact tggacacctg cacgctccac cgttttacga agattgtgaa
    15661 gaatggtacg tggtcctgtg tacagcatac cacgcatttc caagcgaatt cccatcattc
    15721 cacgagggtc cttaatgcct tggaatccat cgacagtgaa ctcttctgga ataaatgaaa
    15781 tcacttcgcg ttccggggtc atactctttg tcaatgctga ttttacaaca ttctcaacat
    15841 ccaagtctgt aatttcttgt gaatctgttg taacaggaat catcccttga gttggttcaa
    15901 tctgaagaag gttggcaggt aatccaacat ttaccttttc aatgcggata cctgactttt
    15961 cttctgcctg ctcgatcgct tttttaatcg ctccagcagc cacctcaata tttacaataa
    16021 ttccatcttt gacgccagca ctttttacat tgctgacccc aatcacattc atttcgttat
    16081 caatatattc tgcaaccaag actttaacgg agcttgtacc aatatctaat cccgtaaaaa
    16141 agccgtttct agccattcta tcagtcctct cttacttcca actttaacaa atcatcttcc
    16201 attttgaaaa atagtataat tagtcatcat tcattatacc atattatatc gaattatggt
    16261 gtttttaaag gattttttta ttactttttc tttacaaaat tgtctatttt agcttgcata
    16321 tctataaatg ccaacttcca tatcaattgt cgttggaact gtcacttctg ccgctatttt
    16381 tgtatagtaa ggcaacttct gactaatctc actcaatgga actaaaaccg tgttcccatc
    16441 tgccatattg agtgtcagca aatccgcggt cactttactt ggcgttaaat ttattgtctg
    16501 aatagcagaa cgaattcctg tatctatttt ccccaattca atggccagtt ccttgattaa
    16561 ttccttgtcg gataaattta tcgttgtgta gccttctggc atggaatcct gtgaaatcgg
    16621 ttcaccgcca atctctccac tagacaatac tggataccac tgactttgtt gctgaatgta
    16681 gcctattatt gcgtattctt tgatgtgaat ggtaaaggta gctggaaact ggaacttgat
    16741 tgtcgctgtc tcaacggacg aactattctt cttaatattc tttgcgtaag catctgcatg
    16801 caaagctaca gtcacattgt aatcatccgg agagataagg ctataatttt ctacttgctc
    16861 agcagttagt cgctcatttc cgacaacctc tatttgtttt ttcttgctgg ttggagaaat
    16921 aaaatacaag gctagagctg ccagtaacaa actcgtcaca agaaccggaa tagctttcca
    16981 gactactttg gaaggaatat caacttttaa agtttgaacc ttttcccctg tttccttttt
    17041 agatttcaga ctctctgttt ttctttctat tccctgaaaa aggacccttt tactcttttt
    17101 agcttctggg ttctcctgtt ctgtctgtcc ctcgtcaact gcctgaattt ccgcagcatc
    17161 tttatgagca aggtaggctt gatggcgtgc tttccattgt tcgaaaaagg cacttttttc
    17221 atcatccgga gcagtcatct caggtatgtc tacatccgta gaaacatccg tagaaagtcc
    17281 tttttcttcg gctaatacag attctttctc ggctggtgag atttgttctg aatccaattc
    17341 tacttgagat gcctgttcca cttctagcac tgattcttct acatttgaat ctttttccgt
    17401 catagaacct accttcccat atcttctcta agcaaattgt aaaaactatc tactgactga
    17461 atttcattag aatttgtcat gttttggata taaaattcct tatttttcaa tagctcatct
    17521 acttctacta acaggctggc aaatgtcaat tgactttcat caatctgctt agaatatccc
    17581 tttttctctg catagagagc attttcaatc tgatcccctc gactggcctg tcgtcctagg
    17641 ggcacaatca aatggagttg ttgcatggca atcaactcaa acagagtatt ggaaccacca
    17701 cgagtaataa cgacatccgc taaatccatc aacggttgat aaagttctgt cacatagtca
    17761 actctatata ggtttttatc taattggttg agactactat cccctgtcaa attgataata
    17821 ttgaatcgtt cggtcagagc agcactattc tgactgatta aatcattaaa gaccttagca
    17881 ccgcccgaac cacctacaaa cagtagggtc ggcagacttt tatcgaagtg actgagaatt
    17941 tctggcaact ggattggtgt aactttgtca ttcgttttcc ccacttttgt aaccgcacca
    18001 acatgtttta ctttagtcaa gctagcaggt tgctcaaaag tactatacat ggttgtcgca
    18061 aatttatagg ctattttatt ggccagtccc attgttaagt ctgattcatg gataaagacc
    18121 ggaacccgca gcaaattagc agcaataact ggcggaaccg atacaaaccc accttttgaa
    18181 aaaagagctt gcggacgaat tttagcaata atggccacgg attgaagaac accaaaacca
    18241 actttaaaca cgtccaacat attttggaaa gagaaataac ggcgcaattt tccagtcgaa
    18301 atagaatgaa aatggacatc taaacctgat ttcacaacct gctcatgctc aataccgttc
    18361 ccatcaccaa tatagtggac ttcccagcct tcttccaaaa atcgcggaat caaaaggaga
    18421 ttgagcgtca cgtgcccaac agtccctccg cctgtaaaaa caattttttt catgattatt
    18481 tcaactcctc aaaggtctgt aagaagacgt cgccacgcac ttcaaaattg gcatacatat
    18541 cccagcttgc attggctgga cttaaaagga caatatctcc tttttctgca atggcaaagg
    18601 cttttctagt cgcatccgca atatcgagag cttctatcgt tcccacttct gccttatctg
    18661 cagcacgttg aacacgggga gctgactgac caaggagcac cattttcttt agtccgacca
    18721 aatcagggac taattcatca aattcattgc cacggtccaa gccacctgca atcaaaatga
    18781 ccttgctatt gtcaaaccct gaaagagctt tttgagtcgc caagatattg gtagacttac
    18841 tatcattgta gaaagaaact tcgttgacct cacctacaaa ttgcaagcgg tgtttgacac
    18901 ctccaaaggc tgacaaactt tcctgaatcg cttggtgatc tactcccaac aattttgcaa
    18961 ccacaattgt tgccaaggca ttttcaacat tgtgtgaacc tggaacacca atttggtcag
    19021 catccatgat gtattcacct ttgaaataga gtttttcatc tgctaagtag gctccatcaa
    19081 ctacttccag cgtcgaaaaa ggaacgacag ttgctttggt ctgtccagcc aattccttag
    19141 cttctttctg gttgaagttg agcaccacaa aatcctcagc cgccatctga ccctgaatca
    19201 tccatttagc tgctacatag tcttcaaaag tcccatgata atcaatatga ctggcaatga
    19261 ggttggtcac aacggcgata tgcgggcgga aagattctgt ccccattaac tggaaagatg
    19321 ataattccat caccaaggta tcctctgcag tcgcagtttg agcgaccgaa gatgctggat
    19381 agccaatatt tccacataat tttgcaggtt tatttcctgc attcaagact tctgcaatca
    19441 tggtcgttgt cgttgtcttg ccgttcgaac ctgttatccc cacgattgga gcatctgata
    19501 ccaagtaggc caattcaacc tctgtccata ctggaattcc tttgccaatt gctttttcaa
    19561 ccataggatt atcatagcga attcctggat tttttaccat caaagcgaaa tcttcatcca
    19621 ataattccaa gggatggctc ccgcaaataa cacggatacc atcttccaac aaagattgag
    19681 cagtcggatt ttcttcaaaa ggctttccat cgttaacagt gacgatagca ctcaatttat
    19741 ctaggagacg ggctgcagat tcccctgatt tagctaaacc tagcactagc actttcttat
    19801 tttttacaat atcaatcatc ttcatctcaa ttacctttac tttctaacac cttattttac
    19861 cctttacgaa gacctttttc aagccagagg acagaaaagt aaactctacc cgtagcgcta
    19921 gttcatttca aaatacaata aaaagcccaa atggactata ctgtaagcga cgaaacatac
    19981 agaggggtag tccaaatgag ccacttacag tatactgcta aatctcatca tttgcaatgg
    20041 aatgtacgcc aattatcaca aatttctcat catttctacc aaaactattg cccagattcc
    20101 ttttaacttc ggcgtaatgt aggctttcag atagattact ccttgtcttg cttttgttac
    20161 aagctgaact aggtatgaca tctcaacgac atttctacaa tatctgccac ctctttcctc
    20221 gtggtccgtt actagaaaga agtcgtttca atcgtcggtc taggcaattg atttgagttg
    20281 acaggaggtt agaagttgaa caattacctc attcagccat attgtctaat gtctataata
    20341 gaaaaatgtt ccagagtcaa atcgactttg aaacattttc aatagttcaa aatttcttgg
    20401 gaactaaaaa atcatccaac acttgattcc tattccaaga acgaaatgtt ttactagttg
    20461 ttataaaaat ataaattaag attacaaata gaattggagt tgcgataaat ggagcaataa
    20521 aaattgcttt aatttggata gcatcagagg taaccaaagc actaccatta acattttcaa
    20581 tacgatagcc acgaactaat agcctatgtg tattaatacc gtagggtgta caggttacca
    20641 aggtcaataa gtctttctga ggttctatgg taagagccga taaatctgat ggctcaacca
    20701 ctcgaatctg gtccactttg taagttagtg tttcattgag aacatgaatg gtaaatatat
    20761 cgccttctct caacttatct aaatcagaaa acagacgggc agatgggagc ccacgatgcc
    20821 ctgaaagtac actatgagtt cccaaacctc ctacaggcaa cgatgttcct tctagatgtc
    20881 caatagaagt ctctaaaacc gtttcgtctg tcccatgaaa tatagataac ttgacatcaa
    20941 ttttaggaat ctcaatatag cccatgatgc catctttatt gaaattcaat tcctgattat
    21001 aggcttcaat gtcggatgca gtcacattcc agtttaaggg tttttcttga ttatactggc
    21061 gcgcactatc aatgatttct ttgtattggt cagctgtcat atctgatact gtgtcagaat
    21121 aggacatgat ggcctctgat tggtggaagg aattccagta atcactgacc gatggataag
    21181 ccaatagtcc aatccccaat ataaaaatta atggcatgat aaaagacgga cctttctttt
    21241 tgagccattt gatcatgaaa tcccctcctt tccttgtgtt gagaccaaag aaatatcttc
    21301 ggaaatactt ccactcttgc ttttgcactt ccgaagatag attctaaata ttaggtattg
    21361 tatggacaat tagatattgt tcatacgacg ttttgaaata gtataaacca atgctaccaa
    21421 aagtaggatt gaaccaacta gatagaataa agttgttcca atcgcaccag tgcttggcaa
    21481 gacaccaccc tttttattga cgatatttgc ttgtgctgtg ttattctctt tcacttcaat
    21541 ggattgacgt tctgtcaaga tattgtaacc attcggtgct ttcatttctt caagataata
    21601 ggtcgtgcta tgtttcagac ctttaatcac aacttcgcca gcttcgatga caacaccttg
    21661 ctcatcagcc tgcgcaacac gatacactcc gtcagattcc ttgacaacct tgatttcagt
    21721 tccattgttg gctgcatcat agagtttgaa ctctgcacct gtcaaagttt cacctacatt
    21781 gtttgttttt ttcaaagtga aacggtgagt agtcactttt gttgtttcag ttggcttgtc
    21841 tggatcaact ggtgttggag gagttgttgg attatcaatt gtgttgtaac caatagtcgc
    21901 tgagttggtt gcttctccct ccttggcatc tttagtcacc actgctgagt aggtgataat
    21961 aacttcagct ggagagttat agatggtttt attactagct gccgcatccg cccatgtaag
    22021 gacaagattc attttgcctg ttgcatcaaa agtcttcgaa atttttgctg tgatatccac
    22081 accatccact ttaacgttga cagaattttg atcaattgcg agggctgttg ggctatcttc
    22141 gatagcgtaa gaaacaatct gcttggtttg tctatcttta gtaacgtagt tggtagcatt
    22201 aaacttgatt tggaagttga tggtatcgcc aatttttgca gttgtttcac tagttgtagc
    22261 accattgcta agaattttct taccgccacc attatttgaa tctggaatgg ttggattagt
    22321 ggtatttttg tcgataacag ttgcatttgg tgttgtacta tctactgtaa gcactgcacc
    22381 aagtgatgat gttacaaaat agtaaccaaa tgtcaaatgt gtaaacacaa gagagttatc
    22441 attcgctgta gcacttgtaa cttctgtacc gaaattcttt gcccaagccg caaatgcttc
    22501 tgaagagaca gtagcacctt cctttgcagt aatattacct ttgctgtcca cggcaaagta
    22561 gggattatct gctggaagta tttttccagt cggaaccttg taggaaatac ctgaaccatc
    22621 ttctgttaca gtagcatcaa agagtttata gatggtatat ttttggcttt gcgaagcatt
    22681 gcgcacagta atttttcctg tgccacctgc atttgtattt acctcttgcg cactagcaaa
    22741 aggggtaggc aagaccatag ctaacacagc cagcacggtc atgaagagac tttttaattt
    22801 attcatgatt ttctttttcc tttttcattt tttattaagg agaagcagac atgaaatcct
    22861 gcaactccca ttgtgatact ttaattatgt aagcgtgaaa tcagtcctag gacctctttt
    22921 cccgattacg ttgaacaaac agatgcatca aataggagat gactatgagg acaaggccag
    22981 aaagaataaa ccacttctgt ccatctccac ctgtgcttgg caaggctcta ccctgctcat
    23041 tggccacttg gatgcgatgg ctggcatcac cactaacctt ggtaagcgtt gctcgttctg
    23101 gactagcatc attgcccgct tcatcagaca aggcaacagt gtagaaggaa gatgttttat
    23161 cttcgttaaa gttttccttg atgctgaagt agatataact atccaagaca ataaaaccat
    23221 caggtgctgc taattcttgc agacggtagc gacctgcttc taagcctacc ggtatccgaa
    23281 taccatcttt gctggtaatg gcaaattcct gcaccccatc tacctgagcc cagttcaaac
    23341 catcccactt ggtcagttca aacttaccgc ctgcaagaga tttccaattt tcatctgtct
    23401 tggtaatgtt aagcgtttca agaattgtca acattccaaa ctcatctgta atctcgtaat
    23461 tgctgagatt tgtaccctct tttgctttat aagtaaagct attggttctc ctacctggat
    23521 tagttaggct tgcaaaatca gagaagtcaa caccttcgcc ttggacgaag ccatcatagc
    23581 tagcaccctc tggagtcgtc atactaactt cttgtgctgt cagttctgtt ccatcatatg
    23641 ctttttcttt cgtagctgac gttaacatta gcttacgcgg attgatagta atcttgccgt
    23701 ctttagctaa gaaagtaacc tcaaaattat catttgtatt aacaaattta ttttgtaagg
    23761 caaaggtata agttcccaca tctttttggg tcatttcaat ttctgaacct gtatagtgaa
    23821 tgtcggactc tttataaagg ctatcagaaa ttgagtttac cttgtagtca acagtagaca
    23881 ctttgccatc atagattttt tcaatcgttt gacttccaat ctctactgta accggacgtt
    23941 ttttaactgt cagagaactg tcaagatagg taatctcata gtaatcggta tgatttttgc
    24001 catcagcagt tgttatgaca gctgattttg gtttcgcatt tgatgagccg acatcagtct
    24061 gacttccctc aaaatcaata gcagtcaacc tatccccgct agctagagat gttgaataac
    24121 cagattttaa atcatctatt cctgatagtt tcaacggctc gtcatcgtag actttctctc
    24181 ttggctgacc ttcaagtgtc agatttttct tataataaag attaatcgtc cgcttatctg
    24241 gtcttctgat acgatagatt gatttatcta cattgttctc gttatctttt gaggttgaga
    24301 aggtatatcc ttgaatctcc ttacggttta ggatataggt atcacctttc ttcttatact
    24361 ctaccagagg gtcttgccca gcaatagggt tgccatccat gtcaaggtaa ttgactgtga
    24421 gggtcgcaaa ctcatatggt agataataga aagtaatgat attattggct gagtttgttg
    24481 tcagagtaag actcaagaca ttgttttgag gatagtatcc tgttcctaca cccttggcta
    24541 cagccttagc aacaatcata ttagcatcag cttccagatg gtcttctggc aacaatacgg
    24601 tgttgttact gtcatcatta tctccatcct taaggaggta acgaacggta tatggtattt
    24661 ttgatgtcct atcactgtaa tagaaaacaa tctcattatt gtcataggtt aaatcaaggg
    24721 tcttactgct ggcatctggt ctgtagcctg tgatggctaa agcattttct ttgatggcct
    24781 gatgcaattc aagtgctgga ctctcaatga ccttgtctgc tgccaaactt ttattagtag
    24841 tagcatctac gtacttaacc atatacttga gaggttgagg tttccagcga gcataaagtg
    24901 tgatattttc tgtgactggc ttagaccaga catagcgctc cccaccttct ttagctgtaa
    24961 accaaccgtc aaagtcatag tgggctctag tcggatcagc aacaactgtc gcaattttct
    25021 tcttttcaac tgtttgagac tctggtgctg taccttcacc accatttagg tcaaagctaa
    25081 ccgtcatgtt tggagccacc cacttagcgt agagcaccaa gttgtttgat ggcattttat
    25141 caaatgtgta tgcctcagta agattggaat cagtatacca accaccccag gtatagtcag
    25201 catcaactcc agctggccga cttggtgtgt agttgtagat tgcactattg atattggcat
    25261 caaagagaac attctcggga tcctttaact tagtacttcc ataatagtaa tcaatcttga
    25321 aactatctcg gttataatag aagcgataat gatcatacaa tattatacca ttgtttagtg
    25381 tagcataagg tccagaatga ttatcataac ctgccggaac agtaggaata acttgataac
    25441 ccataattgt ttttgcattg agtggcgaat tttgtccacc atttaagctc tgactatgtt
    25501 cagataatac atagacattt ggattatctg ctgactgcaa gtaatagtca accctttttg
    25561 tttttaagga actttcccaa tgccctgtta cgacaacctc atgattagca tttgctgttg
    25621 taatcatatc ggttgtaagt gtaggtctgc gagtcacatt ataagaatta ctgtctgaga
    25681 aagtccatcc tctaaatttc atagaatcgt ctttcccagg tgtaccattt cctatgcgca
    25741 acatctgata aacttcatcc ccacctgatg gccaaagatt caaaatatct tgtccaacaa
    25801 ctacatccct aatcttgtat tgagttccag tataagttga accacctttt tcaatctgac
    25861 cataataggt gtagaatctc gatgtcgaat tccgattgat atcaaaagtt aaagtatatc
    25921 taatcaggct atagtagact ttcaaagtag aagaaccatc tgctgcgact acgatagaag
    25981 atgtgctatt tttcccgtag gcggtttctt tttcataacc tatcggtggt ctactagata
    26041 tttctggagc agtacttgct tgaatgattg taccaacttg tcctgttgca ttaattgaac
    26101 tatcataagc atagtccgtt tgacctgtgc tattattgta cacctcttta taataagcaa
    26161 tggtgtactt aacagtatca gccttccact tagcgtagag cgtcttgttc ttatctaaag
    26221 taactgagcc actaataggg cttcctgtta aattagcatt atcataccaa ccatcaaacg
    26281 tgtaaccttc tctagttggg attgtcgttg tcagattgac cttagcattg tagagtccag
    26341 tttgtggcgg gaggtaagac cctccattag tattgtaaga aagtgtatac tctttacgag
    26401 tataataaac atcaatctct tgtccacttg attttgtcaa ctcaagagaa tctgtctttt
    26461 caaaatttgc atatgaataa ttgcgaacct ctggtctaat cgtagacccg ataataccgt
    26521 agtaggttcc cgtctcaata tctgtgtaac ctgtcccatc caagtctttc agtttgtaat
    26581 gaaccttgta ttcggaattg taggggatat aagcaacctt aatggtcagc gtatgatcta
    26641 cattcccatc ttcttcgtct agtctcgcca aatcttcaga ctgtatgtct atgatgggtc
    26701 tactggtgta gtaaatggcg tctgtcacaa gaccactttc tgctccactt ttaatctcag
    26761 tggatacagg tgtcgtgatg cgataaggca tatcttccgc ctctagctca taaacttctg
    26821 tttcaaaggt aactttttga cccgaagtaa cgttattata aaaatactga atcgttactt
    26881 tatagattga gattgaagca aattctgctt ccacaatcat atctcgggta accagagtgt
    26941 cagcagtaac aattttattt gtctctttgt cacgccaacc gataaagcga taaccagcac
    27001 ggaagggttc ctcagggagc gtttctagtt ttgctccctc ttttttatca accaaactcg
    27061 aaactgtctg ctcctgtcca tttgagtcca gagctacaaa agttacttta tagtactctg
    27121 ccccaacaac accataatca gagaaggagt ctgcgtcaaa gctaatttct gacacttgat
    27181 tattttcttc gttggtttca acttctggga caatttctgc cttattagct gattgaaaat
    27241 gaacagcctc gaccttggtt tcctctttaa gtttgatatt gctatctgtt ttgatttgaa
    27301 tggaaattgg tgcctctggc tgaatttcct tgccatcatg cacaaagctt atatcaaaga
    27361 atcttgcaaa agttagagca cgagctccca gagtagcctt ggctttatta aatcgagatt
    27421 tgtaggtatc tgtccccgct tcaatttctt taaccttcag ttccactcct tttggcattt
    27481 ttgcagaagc atcaaatctg gcgataactt cataatcttt acctttatga ataaactctg
    27541 tcgcttcagt tattacctgt tgatcaactt ttgtggtttc agttgtctgg ggttccgaag
    27601 aaagctccgt tgtcgatgtc acacttgttg tcatgcttgt ttgctctatt gcagagcttt
    27661 cttcaaccat ctgactagca gcctccgtca cttctactgg agtttcttca ttaccttgta
    27721 tttcagtagt tgtctctgag ctgctgatac ccgatagttg gctagcttta ttagattcca
    27781 gtgtcagagc tggtaaaatc aatgcatacg ttgttacaaa tacaaccaca acagctacaa
    27841 aattaacaaa ttttctatat tttttctgcc ataaagataa tcttttaaac ttaaaattat
    27901 tttgcatgtt cctcccccta aattgcttta actatctaac tttaagttca tcatttttaa
    27961 tcaattactc ccatctctct caaaggccat actctaaaaa ccaatttacc aacaatctgt
    28021 tcattagaga ctgtaccaat agcgttgttt cgcgaatcaa tggactcttt ccggttatct
    28081 cccatgacaa agattcgatt ttccggtacc tgatagggaa actcaatatc tgtatgacca
    28141 taatccctat ttgccaaata tggctcgtcc aatctttgat tattgacata aacatttcct
    28201 tgtttatcca tatccaccca atccccagct tcagcgatga cgcgcttgac cagaatattg
    28261 ttattgtaat aaaaagcaac aacatcactg ctttcaaaat cattgctctt tactgataca
    28321 acgatgtccc cactattcag ggttcctttc attgaatctc cgtatattct caaaataggc
    28381 aaaaataata cagcgattag tattgcaaat gctgcaacta ctaccaacat aaacactgta
    28441 cttttcactg tcctccaaaa tgtatgtcta tatctttcat gctgatatag ctcttttaat
    28501 tctgaagttt ttggaagttc ctttcccttg agatttgaac tattcatgaa catcaccaat
    28561 tttgtttttc acattataga gatatagatc cgcagctttt tgcgcttctt caaaaatatt
    28621 agtcagtttc attgaagctt ccgctatgga gccagattga ctaatcataa ttctt
//
LOCUS       DASFQD010000012        28538 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.012, whole genome shotgun sequence.
ACCESSION   DASFQD010000012 DASFQD010000000
VERSION     DASFQD010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 28538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28538
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.012"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            87..827
                     /locus_tag="U1021_000415"
     CDS             87..827
                     /locus_tag="U1021_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HEM4710999.1"
                     /translation="MKKDFFVIGDVHGKFELLLDILKKWNEERQQLIFLGDLIDRGEN
                     SKACLELVWSLVREKGAICLTGNHERMFLAWLRDPLERYDHYRRNGGDTTINSLLGRP
                     LDAPVDGLVDANAVMEQYGDLIDFVKSCPYHLETEGYIFVHAGVDLTLPDWRKTSNHD
                     KVWLRTPFHEAENTTGKMIVFGHTPVYNLFQTQLRISQVWTSPDGKMGIDGGAVYGGV
                     LHGIVLDDTGLVKDNIIGAVYPRKHTSD"
     gene            903..1601
                     /gene="dapD"
                     /locus_tag="U1021_000416"
     CDS             903..1601
                     /gene="dapD"
                     /locus_tag="U1021_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-acetyltransferase"
                     /protein_id="HEM4711000.1"
                     /translation="MTAQKMTAQEIIAFIGNAVKKTTVKVTFEGELAGPVPAEVTKLG
                     NVLFGDWKDVEPLLANLTENVDYVVEQDGRNSAVPLLDKRNINARIEPGAIIRDQVTI
                     GDNAVIMMGAVINIGAEIGPGTMIDMGAILGGRATVGKNSHIGAGAVLAGVIEPASAE
                     PVRVGDNVLVGANAVVIEGVQIGSGSVVAAGAIVTQDVPENVVVAGVPARIIKEIDAQ
                     TQQKTALEEALRTL"
     gene            1611..2738
                     /locus_tag="U1021_000417"
     CDS             1611..2738
                     /locus_tag="U1021_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006151341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyldiaminopimelate deacetylase"
                     /protein_id="HEM4711001.1"
                     /translation="MLDLIATHRALHQIPELGMEEFKTHAFLMETIENLLEDCNFAQV
                     RTWKTGILVYLTGSAPEKTIGWRADIDGLPIVEETGLDFKSFHPDRMHACGHDFHMTI
                     ALGLLEKMAEQQPRNNLLFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLK
                     VGQMATNRATLFAGTCEVKIRFTGKGGHAAFPHTANDALVAASYFVTQVQSVVSRNVD
                     PIEGAVVTFGSMHAGTTNNVIAETAFLHGTIRALTQSMSLLVQKRVREVAEGIALSFG
                     VDLEIELNPSGYLPVENNPQLADELMTYFDGIDGVEMIDCPPAMTGEDFGYLLNKVPG
                     VMFWLGVDTPYPLHNPRLSPKEEVLPFAVDKLSDFLKMKAR"
     gene            2779..3321
                     /locus_tag="U1021_000418"
     CDS             2779..3321
                     /locus_tag="U1021_000418"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEM4711002.1"
                     /translation="MDKKSIRQEVLQSLKGLPSSQRARWNQQLTERLLASEAYQGAKS
                     LGTYLSMPHEFDTSYLIEQAQKDGKQIFIPKTYSQGRMDFVEYNPDDLVKSRFGVWEP
                     GTYSQPVDKSVVKLIHVPGLAWNQAGFRVGYGGGFYDRYLVDYQGETVSTLADFQIYD
                     FEPDVFDIPVKELLIFEELF"
     gene            3305..3982
                     /locus_tag="U1021_000419"
     CDS             3305..3982
                     /locus_tag="U1021_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEM4711003.1"
                     /translation="MKNFFDKRYPVTNGLLAITALVFLLIQVFRFGQTTAAYTIFEFG
                     GMFGEVVRYDPTQLWRLISPIFVHIGLEHFIFNSITLLGLGYQLEGLFGSRRFFLLYI
                     LSGIMGNLFVLFFTPDVVGAGASTSLFGLFAAMALLRKFSRSPYLQVLGQRYMVLLGL
                     NLVLGLFNPTISMAGHIGGAVGGCLVVMFLPPLVEKDLFTGKQIFFSFIGYVGLIALL
                     LGIFYVT"
     gene            complement(3998..4900)
                     /gene="galU"
                     /locus_tag="U1021_000420"
     CDS             complement(3998..4900)
                     /gene="galU"
                     /locus_tag="U1021_000420"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEM4711004.1"
                     /translation="MTKKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVE
                     EALRSGIEDILVVTGKSKRSIEDHFDSNFELEYNLKEKGKNDLLKLVDETTGIRLHFI
                     RQSHPRGLGDAILQAKAFVGNEPFVVMLGDDLMDITDTKAVPLTKQLMNDYEKTHAST
                     IAVMPVPHEEVSAYGVIAPQGEGVNGLYSVETFVEKPKPEDAPSDLAIIGRYLLTPEI
                     FEILENQKPGAGNEIQLTDAIDTLNKTQRVFAREFKGNRYDVGDKFGFMKTSIDYALQ
                     HPQVKDDLKQYLIDLGKKLDTKKN"
     gene            complement(4919..5935)
                     /locus_tag="U1021_000421"
     CDS             complement(4919..5935)
                     /locus_tag="U1021_000421"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000415108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEM4711005.1"
                     /translation="MEKQTIAVLGPGSWGTALAQVLNDNGHSVRIWGNIPEQIDEINK
                     QHTNTRYFKDIVLDEKIKGYKDLAETLDGVDAVLFVVPTKVTRLVAKQVAQALKHKVV
                     VMHASKGLEPDSHKRLSEVLEEEIPADLRSEIVVVSGPSHAEETIVRDLTLISAASKD
                     LETATYVQNLFSNRYFRLYTNNDVIGVETAGALKNIIAVGAGALHGLGYGDNAKAAII
                     ARGLTEITRLGVAMGANPLTYSGLSGVGDLIVTGTSVHSRNWRAGDLLGKGEKLEDIE
                     ANMGMVIEGISTTKAAYELAQELGVYMPITQAIYNVIYQGASIQDAIKEIMSGEFRHE
                     NEWS"
     gene            6077..6526
                     /locus_tag="U1021_000422"
     CDS             6077..6526
                     /locus_tag="U1021_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM4711006.1"
                     /translation="MGHTIADFRNLLNQIEQISETIAKEYDVEHLAGPQGWALRFIAE
                     RSETETFVKDIEAELKISKSVASNLVKRMEKNGFIQVLPSQVDKRYKRLVLTEKGQGK
                     ICHLKAFHEEMHHSLFWGIQKEDFDLVKQVANQLKENIQHYKEKNHV"
     gene            6519..8225
                     /locus_tag="U1021_000423"
     CDS             6519..8225
                     /locus_tag="U1021_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711007.1"
                     /translation="MFKEAILRYKWYALASVLLTSIVVATTLMQPSYLQDVLTAVLAN
                     DKDEIVRVGKLLLIIAGTGLLAGLVNTIAAAKISQGVSADIREKTFRKIQSFSYANIE
                     EFNAGNLVVRMTNDVNQIQNLVMMLFTVLMRVPLLFVGAFIMAVRTMPELWWMIILMV
                     VLIMAIMAVVMGQMGPRFGKFQNLMDKMNSIAKENLRGIRVVKSFVQEKNQYAKFKKV
                     SNELLDLNLFIGYGFAILQPLMMFISYMAIFASLYLVSGMLETNMEAVGGFTSFMSYL
                     MQIMFAIIMTSFMGMQASRAAISIKRISEVLDTEPAMTFKDVADEELTGKIVFDNVSF
                     TYPHDTEPTLKNISFEIEPGQMVGVVGATGAGKSTLTQLIPRLFDPQEGTVSIGGRDL
                     KEVSQNTLRDTVSIVLQKAILFSGTIADNLRQGAPGADRARLERAAGIAQAKEFIDRL
                     DDTYESQVEERGNNFSGGQKQRMSIARGVIGEPKVLVLDDSTSALDAKSEKLVQEALN
                     HDLKGTTTVIVAQKISSVVKADKILVLDEGRLIGQGTHAELVATNDVYREIYETQKGR
                     EE"
     gene            8226..10010
                     /locus_tag="U1021_000424"
     CDS             8226..10010
                     /locus_tag="U1021_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000859866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711008.1"
                     /translation="MKTLRFFWFYFKRYKLSFAVIFLAIVAATYLQVKTPVFLGNAIA
                     EMGKIGQAYFMANQTGQADFQPDMADFNGVMLNLFFAYAATVVASLIYTLLFTRIVAH
                     STNRMRKGLFGKLERLTVAFFDSHKDGDILSRFTSDLDNIQNAFNQSLTQVVTNIALY
                     VGMVIMMFRQDTRLALVTIASTPVALIALVIIIRLSRKYTDKQQAAVSKLNAYMDEKI
                     SGQKAIIVQGVQEETIDGFLELNEEVRRTTFKGRLFGGILFPFMNGMSLVNTAIVIFA
                     GSSIVLNDSSLETAAALGLVVTFVQYSQQYYQPIMQVAASWAELQLAFTGAHRIQEMF
                     DEPEEVRPQNAPLFIELKEGVEIKDIDFGYLPGQKVLDKVSISAPKGKMVAVVGPTGS
                     GKTTIMNLINRFYDVNGGSVAFDGRDIREYDLDSLRDKVGIVLQESVLFSGTIADNIR
                     FGDESISQEMVETAARATHIHDFIMSLPEGYETFVTDDENIFSTGQKQLISIARTLLT
                     DPQVLILDEATSNVDTVTEAKIQKAMEAIIAGRTSFVIAHRLKTILNADEIIVLKDGK
                     VIEQGNHSQLLKLNGFYAELYHNQFVFE"
     gene            10112..10555
                     /locus_tag="U1021_000425"
     CDS             10112..10555
                     /locus_tag="U1021_000425"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000701975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEM4711009.1"
                     /translation="MKIRGFELVSQFTDENLLPKRETAHAAGYDLKAAERISLEPGEI
                     KLVPTGVKAYMQANEVLYLYDRSSNPRKKGLVLINSVGVIDGDYYGNPANEGHIFAQM
                     RNITEETVVVEAGERIVQAVFAPFLLADGDQADGVRTGGFGSTGK"
     gene            10562..11095
                     /locus_tag="U1021_000426"
     CDS             10562..11095
                     /locus_tag="U1021_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM4711010.1"
                     /translation="MQILFVRHSEPDYSMFDQHDNPRLYAGFGRDLAPLTEKGRTLAQ
                     EIASNPIFSQAQVVIASSVTRALETATYIAHAQQLPLLVEPFFHKLRPDMTGQNASQD
                     EAVLAHRLFLENGGAVPETSSARYETAAEMRERFLQALEKYKAYDRIVIVCHGMLIRQ
                     FVPKETIAYCEILEYNL"
     gene            11102..12472
                     /gene="radA"
                     /locus_tag="U1021_000427"
     CDS             11102..12472
                     /gene="radA"
                     /locus_tag="U1021_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEM4711011.1"
                     /translation="MIIAKKKTTFVCQSCEYHSPKYLGRCPNCGSWSSFVEEVEVAEA
                     KNERVSLTGEKTRPMKLNEVSSIQVARTKTNMEEFNRVLGGGVVPGSLVLIGGDPGIG
                     KSTLLLQVSTQLSTIGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSIRTE
                     IEKIKPDFLIIDSIQTIMSPDISSVQGSVSQVREVTNELMQIAKTNNIATFIVGHMTK
                     EGTLAGPRTLEHMVDTVLYFEGERQHTFRILRAVKNRFGSTNEIGIFEMQSQGLVEVL
                     NPSEVFLEERLDGATGSAIVVTMEGTRPILAEVQALVTPTMFGNAKRTTTGLDFNRAS
                     LIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVALASSYKDKPTNPQECFI
                     GEIGLTGEIRRVNRIEQRINEAAKLGFTKVYAPKNSLTGIKVPKEITVISVTTIGEVL
                     QKVFNL"
     gene            12593..13087
                     /locus_tag="U1021_000428"
     CDS             12593..13087
                     /locus_tag="U1021_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEM4711012.1"
                     /translation="MSYFQNFMKANKAYVDLHGDYHLPLRPKTKVAIVTCMDSRLHVA
                     QALGLALGDAHILRNAGGRVTEDMIRSLVISQQQLGTREIVVLHHTDCGAQTFTNEEF
                     AVQLKRDLGVDVAGQDFLPFTDIEESVREDIALLKQSPLIPDDVEISGAVYDVDTGRM
                     TEVI"
     gene            13295..14053
                     /locus_tag="U1021_000429"
     CDS             13295..14053
                     /locus_tag="U1021_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00266 family protein"
                     /protein_id="HEM4711013.1"
                     /translation="MSDNRMKYTIDSNMQFPLVEIALEAGESAYIQQGSMVYHTPSVT
                     LNTKLNARGGSGFGKLMGAIGRSMVSGESMFITQAISNSDDGKIALAPSTPGQVIALE
                     LGAEQYRLNDGAFLALDGSAQYKMERQSVGKAFFGGQGGLFVMTTEGRGTLLANAFGS
                     IKKLTLDGGSITIDNAHVVAWSRDLDYNIHMENGFLQSIGTGEGIVNTFTGYGEIYVQ
                     SLNIETFAQVIGNHIVGAGGDGGGGSTSLLDAIF"
     gene            14231..14677
                     /locus_tag="U1021_000430"
     CDS             14231..14677
                     /locus_tag="U1021_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family transcriptional regulator"
                     /protein_id="HEM4711014.1"
                     /translation="MKVRIEFDDSLDHVEVVIRTSQLGPEIEQIQQALQQVSRPSLVF
                     YKGSSEYFLSLGDILFFETDGTKIFAHTGDDAYEVKMKLYELGEHLPIYFCRVSKSTI
                     ANARAVYSLDKSFSGTSRISFYQTHKEVHVSRHYYHLLKEKLREVR"
     gene            14682..15341
                     /locus_tag="U1021_000431"
     CDS             14682..15341
                     /locus_tag="U1021_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711015.1"
                     /translation="MKRLLIGAAVIGLAVLVLLRDSLGLHLAMPFWTTVWFVLTFVTG
                     FHRLVKLDWLASIFCFGLAFIAANSVYEWVEFGTWNMFLSLVLLCLGLKLIFKPRKRR
                     LTHGAVTGVIGDKGRETAFGFSTRYIHDDNFLHDSVEVAFGSSTVYFDQAIILGDKAE
                     FHIDAAFASVDLYLPANWQAVVELDSSMSAVNNYATGMGEKMLHITGDMAFSTLNIYY
                     T"
     gene            15428..16708
                     /locus_tag="U1021_000432"
     CDS             15428..16708
                     /locus_tag="U1021_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM4711016.1"
                     /translation="MKKILKNATYLWVLTADMLSNFGDVVYYLALMNYVLLVPNSRLA
                     LAIVTFSEIFPSFMGLFTGYLADKTVNKISTIKLTLLFRVVLYLILGFCMGFEPALWI
                     VVVAATFNVFADFAGFYENGLYTPLGLRVAPKEEREQYSAFRQTVTSLLNIAFQAFSA
                     LLVGLLSYQNLAFLNAGTFLASLLIMQLLTPAFRKLLTEQPLKIAEQPSQPEQETKGP
                     GILASFKQAIVELRKIPEFRLVLITSPLINACGAILYPILVLLISEDPGLVFLNVETT
                     LALTILIFFVGHILGSTLVFTLFKKTSMVTLEVAATFSLLGVFVGMLLHQLPVIFFFL
                     TTMGISSGASGPKFNAKFVNSMPEEQLATIGGAVSTYFMLGQAFTRLLVSGLVLVLTV
                     DQISGLFLTTTGLLVLYVLYWLARNQKTPQNQSV"
     gene            16780..18234
                     /locus_tag="U1021_000433"
     CDS             16780..18234
                     /locus_tag="U1021_000433"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEM4711017.1"
                     /translation="MTKPIRVRYAPSPTGLLHIGNARTALFNYLFARHHGGTFLIRIE
                     DTDRKRHVEDGERSQLENLRWLGIDWDESPETHEQYRQSERLDIYQKYVDQLLAEGKA
                     YKSYVTEEELAAERERQEAAGETPRYINEYLGMSEDEKAAYIAEREAAGIVPTVRLAV
                     NETGIYKWNDMVKGEIEFEGGNIGGDWVIQKRDGYPTYNFAVVVDDYLMKISHVIRGD
                     DHIANTPKQLMVYEALGWEAPEFGHMTLIINSETGKKLSKRDTNTLQFIEDYRRKGYM
                     PEAVFNFIGLLGWNPGGEEEIFSREQFIQLFDENRLSKSPAAFDQKKMDWMSNEYIKN
                     ADLETIFNLAKPFLEEAGRLTDKAEKLVELYKPQLSSADEIVGLTDLFFSDFPELTAE
                     EKEVMAGETVPTVLNALKEKLEAMTDEDFQPDNIFPQIKAVQKETGIKGKNLFMPIRI
                     AVSGEMHGPELPNTIYLLGREKSIQHIDNMLKSL"
     gene            18373..19749
                     /locus_tag="U1021_000434"
     CDS             18373..19749
                     /locus_tag="U1021_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEM4711018.1"
                     /translation="MENHNFENQGTFNREMNSRHLQMLSIGGVIGTGLFLSSGYTIAQ
                     VGPFGAVAAYLFGAVMVYLVMFSLGELSVAMPVTGSFHTYATKFISPGTGFMVAWMYW
                     LCWVVALASQFVGAAQLMQRWFPSVPIWIFATIFAVIVFGLNTLSVGWFAKAEDALSS
                     IKVYAIAAFIVLGTLAIFGILPFEGTNAALLFNNITSNGLLPNGLVGFITVMLSVNYA
                     FSGVEMIGIAAGETDNPKKAVPQAIKSTIGLLVIFFVLTIVVLAALLPMSEAGVTEAP
                     FVLVLDKIGFPYAADIMNFIILTAILSASTSGLYASSRMLWSLANEGMISKELVKINK
                     HGVPMRGMILSMIGVVIALIASIYAEDTIFLALVSIAGFAVVIAWLAIPLAQIGFRRE
                     FLKTHSEDELEYKTPFSPTLPWITVILLVISIIGIGWDPSQRAGLYFGVPFMIGCYIY
                     HYIRFKKW"
     gene            19762..20709
                     /gene="mmuM"
                     /locus_tag="U1021_000435"
     CDS             19762..20709
                     /gene="mmuM"
                     /locus_tag="U1021_000435"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002351766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase"
                     /protein_id="HEM4711019.1"
                     /translation="MGRFKELLEQKEYIILHGALGTELEFRGYDVSGKLWSAKYLLEN
                     PQYIKDIHKDYIRAGADLVTTSTYQATFEGLAEVGLSQAEAEDLICLTVDLAKEARDE
                     VWAELSEAEKAQRTYPLISGDVGPYAAYLANGAEYTGDYGNISLSELKDFHRRRIELL
                     LEQGAELLGLETIPNVLEAQALVELLAEDFPEAEAYISFTSQDGQSISDGNSIEKIAE
                     LINSSEQILAVGLNCTAPSLYPAFLSQLREKTDKPFVTYPNSGEVYDGATQTWKEKAD
                     DSHSLLDNTLEWHELGAKVVGGCCRTRPADIADLVAGLK"
     gene            complement(20759..21259)
                     /locus_tag="U1021_000436"
     CDS             complement(20759..21259)
                     /locus_tag="U1021_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEM4711020.1"
                     /translation="MEIWNAYTADGQLTDHTLTRGESIPDGLYHLVVECIIRHHDGST
                     LFMKRDSTKPSYPNYYEATAGGSALFGEIAEQAILREVREETGIELTVDQLRHHTHFV
                     AHDDQCIFHCYWAETDWDKAAIQLQANETSNYIWVPQEKLKDFLETELVIPSQKDYVE
                     RLFLES"
     gene            21380..22255
                     /locus_tag="U1021_000437"
     CDS             21380..22255
                     /locus_tag="U1021_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM4711021.1"
                     /translation="MQTIVPHLWYDTEAKEAVAFYVELFGGKIDWTYTITDTPSGDSD
                     LIQFQLGDMTLAAISAGPYFKLNESMSLMVNVASKDEVTRLYQALSEGGRILMPLGEY
                     PFSPYYVWLEDRFGLSWQLSYAPDLDKSYQFDISLLFSQEQVGLAQPMLDYYKDKLPQ
                     ASVGQLSYYGEGEAAVEAAKLNYAELLVGGQKMIVMDHGYGGEASFNEAFSLMVYVDS
                     QEEAESWYEKVSAVPEAEICGWAKDQFGISWQIVPRILMEAYDTASPEKVKAVNAAVM
                     TMKRLDIVAIQALLN"
     gene            22361..22888
                     /locus_tag="U1021_000438"
     CDS             22361..22888
                     /locus_tag="U1021_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription repressor NadR"
                     /protein_id="HEM4711022.1"
                     /translation="MKATERRKKILSLLRESLDPLAANYLAKEFGVSRQVIVGDVALL
                     RAEGEAVLATPRGYLLQSSLPSTEGAYIRKIACQHGPEEVEKELTILLEGGAQILDVE
                     IEHPIYGLLSGKLNIASLEDRDHFLDALGQYQGVLLSNLTEGVHTHTVSFPSVQAYNE
                     LSAALKHAGILLENQ"
     gene            22958..23506
                     /locus_tag="U1021_000439"
     CDS             22958..23506
                     /locus_tag="U1021_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711023.1"
                     /translation="MSQLTLSSKNSVKQLSISAILTAFAILIPLMMPIKIIIGPASYT
                     LASHIPLFIAMFISPATAIFVALGSSLGFFLAGFPIVIVFRALTHLFFLTLGAVLVKR
                     FPILMDSKRFLLLGIGLNLLHGLGEYIVVMVLTSGQQTSATYWITMLGLVGVGSAIHG
                     LLDFSLAYYFWKILKERKIYQP"
     gene            23699..24892
                     /locus_tag="U1021_000440"
     CDS             23699..24892
                     /locus_tag="U1021_000440"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEM4711024.1"
                     /translation="MTKEKLILAYSGGLDTSVAIAWLKKDYDVIAVCMDVGEGKDLDF
                     IHDKALSIGAIESHVLDVKEEFAQEYVLPVLQAHAYYEQKYPLVSALSRPLISKKLVE
                     MAHKTGATTIAHGCTGKGNDQVRFEVAIAALDPSLKVVAPVREWKWAREEEIIFAKEN
                     GVPVPADLDSPYSVDQNLWGRANECGVLENPWNEAPEDAFGITTSPENAPDTPEYVDI
                     EFKAGIPVAVNGEKLSLANLIQRLNVIAGKHGVGRIDHVENRLVGIKSREIYECPGAI
                     TLLTAHKEIEDLTLVREVSHFKPIVSNELSNLIYNGLWFNPATDALKAYLAQTQAVVN
                     GTAKVKLYKGSAKVVARKSPNSLYDEDLATYTSADTFDQDAAVGFIKLWGLPTKVNAE
                     IHKKS"
     gene            24906..26300
                     /gene="argH"
                     /locus_tag="U1021_000441"
     CDS             24906..26300
                     /gene="argH"
                     /locus_tag="U1021_000441"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEM4711025.1"
                     /translation="MEAKKLWGGRFEASLEEWVEEFGASIRFDQKLAKYDIQGSLAHV
                     KMLGQTGIVSQAEAQVIQAGLEELLEEYEAGKLVFDIRNEDIHMNIESLLTEKIGSVA
                     GKLHTARSRNDQVATDMHLYLKDTLFQVVDKLTNLRQILVDLAQEHVETIMPGYTHLQ
                     HAQPISFAQHLLAYYNMFSRDSERFAFNMQHTNVSPLGVAALAGTTFPIDRQMTSDLM
                     GFAKPYSNSLDAVSDRDFILEFLSNASILMMHMSRLCEEIINWCSHEYQFVTLSDTFS
                     TGSSIMPQKKNPDMAELIRGKTGRVYGNLVGLLTVMKSLPLTYNKDLQEDKEGMFDTA
                     ETVLISIDILAGMLKTMTVHKERMAQSTEKDFSNATELADYLASKGPPFRQAHEIVGK
                     LVLECSKAGHYLQDVSFETYQAISPLIQADIYDALSSKVAVSRRNSLGGTGFESIADQ
                     LKSAKEEIQNAKSL"
     gene            26371..26730
                     /gene="rnpA"
                     /locus_tag="U1021_000442"
     CDS             26371..26730
                     /gene="rnpA"
                     /locus_tag="U1021_000442"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEM4711026.1"
                     /translation="MKKSYRVKRERDFNDIFTKGNNVANRRFVVYRLPKEQKHFRVGL
                     SVSKKLGNAVMRNKIKRRIRHILIECQHQLVADDFVIIARKGVEELSYQEMKQNLIHV
                     LKLAKLYQEGVVIEKES"
     gene            26714..27526
                     /locus_tag="U1021_000443"
     CDS             26714..27526
                     /locus_tag="U1021_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002267318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEM4711027.1"
                     /translation="MKKKVKWAGLLVASLIVLTACGTGPVTSQSTDAWDRLIYWFASI
                     IQFLSINGQIGIGIILFTILIRTLLLPLFQIQMNSSRKMQELQPQLKKLQAEYPGTDM
                     ESRQQLYEATQALYKENGVSMRASMIPLFIQMPILLALFQALTRVEALKVGHFLWLNL
                     GEPDPFFILPILAAVFTFLSSWLTNKSAIEKNMAMTIMTYVMPVMIFFFAVAAASGVA
                     LYWTVSNAYQVAQTLVFNNPFKIIAERQAKIDAEKERQAKIRRAQKKAQKKK"
     gene            27546..>28538
                     /locus_tag="U1021_000444"
     CDS             27546..>28538
                     /locus_tag="U1021_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein jag"
                     /protein_id="HEM4711028.1"
                     /translation="MKFTGASVEEAIQNGLVELNIPRKKAHITVVAREKKGFLGFGKK
                     PAIVDIDVINETTVVKANQKAVRGVPSEINDLNEPVKSVSEATIDLGKVVAAVKEFEK
                     SGQTLDDDIKAQILKNEKEATTILEETGRIEILSEDLLTTTDATTSAKEDVNQEVISE
                     NQADNFADLDIKIEPQYDIEQVVSEVTAYVQEILDDMDVEARIDTSHNRRTINIQVDT
                     NEPGRVIGYHGKVLKALQLLAQNFLYNRYERNFYITINVNDYVEHRAEVLQGYAQKLA
                     ERVLAEQEAYHTDPMSSSERKIIHRIISKMDGLTSYSEGSEPNRYVVVDIEGNHD"
BASE COUNT         7558 a         5875 c         6926 g         8179 t
ORIGIN      
        1 ctctataatc tctacagtgg atttacccac tacagaaatt atagagccgt ttttctttgc
       61 ttattaaata tggtagaata gagtctatga aaaaagattt ttttgtaatc ggtgatgtcc
      121 atggaaagtt tgaacttcta ctcgatattt tgaagaaatg gaatgaagaa cgacaacagc
      181 tgatttttct tggggatttg attgatcgcg gggaaaattc caaagcttgt ttggagttgg
      241 tctggagctt ggtgcgggaa aagggtgcga tttgtttaac gggcaatcat gaacgaatgt
      301 ttttggcttg gttgcgggat cccttggaac gctatgacca ttaccggagg aatggtggag
      361 atacgaccat taattcccta cttggtcgtc ctttagatgc accagttgat ggtctggtgg
      421 atgctaatgc agtgatggaa caatatggag acctgattga ttttgtcaaa tcttgtccct
      481 atcatctgga aacggaagga tatatctttg tccatgctgg tgtggacttg actttgccag
      541 actggcgaaa aactagtaat catgataagg tttggttacg tacccctttc catgaggccg
      601 aaaataccac agggaaaatg attgtctttg gacatacacc tgtgtataac ctctttcaaa
      661 ctcaacttcg gattagtcaa gtctggacca gtccagatgg gaaaatgggg attgatggag
      721 gagctgttta tggcggagtt ctccatggga ttgtactgga tgatacgggt ctggtaaaag
      781 ataatattat aggtgctgtt tatccaagga aacatacgag tgattgagaa aacaaaattt
      841 ccccaaattt tctgaaaatt ttgatataat agaaaaaata ttatttttag attggaatca
      901 ttatgactgc acaaaaaatg actgcacaag aaatcattgc ctttatcggt aatgcggtga
      961 aaaaaacaac tgtgaaagta acttttgaag gggaattggc tggtcctgtt cctgcagaag
     1021 tgacaaaact tggcaacgtc ctcttcggtg actggaaaga cgtcgagcca cttttggcaa
     1081 acttgactga aaatgtagac tacgtggttg agcaagacgg ccgcaattcg gctgtgcctt
     1141 tgctggacaa gcgcaatatc aacgcccgta tcgagccagg tgccattatc cgagaccaag
     1201 tgaccatcgg cgacaatgct gttatcatga tgggagcggt gatcaacatc ggtgcggaaa
     1261 tcggtccagg taccatgatt gatatggggg ctattctcgg tggtcgtgcg acggttggta
     1321 aaaacagcca catcggtgca ggtgcggtcc ttgcaggtgt catcgagccc gcttctgccg
     1381 agccagtgcg tgttggtgac aatgtcttgg tcggtgccaa tgctgttgtc atcgaaggtg
     1441 tacaaatcgg tagcggttct gttgtggccg caggtgctat tgtgacccaa gatgtccctg
     1501 aaaacgtagt ggtggcaggt gtgccagccc gcatcatcaa ggaaatcgac gctcaaaccc
     1561 aacaaaaaac agccttggaa gaggctttgc ggacactcta agaggtagct atgctagatt
     1621 taattgcgac acatcgtgca cttcatcaga ttcctgagct gggtatggag gaattcaaga
     1681 cccacgcctt tcttatggaa actattgaga acttgctgga agattgtaat tttgcccaag
     1741 tccgcacatg gaagacagga atcttggttt atctgacggg ttctgctcca gagaaaacaa
     1801 ttggctggcg ggcggatatt gacggcctgc ctatcgtgga ggagacgggc ctggacttta
     1861 agtccttcca cccagacagg atgcacgcct gcggacatga tttccacatg accattgcct
     1921 tggggctttt agagaaaatg gcagagcagc aaccgagaaa caaccttctc ttcttgtttc
     1981 agcctgcgga agaaaatcta gcaggtggca tgctcatgta tgaagcggga gcatttgggg
     2041 attggttacc agatgaattt tatgggctcc atgtccgacc tgacctcaaa gtcggtcaaa
     2101 tggccaccaa ccgtgcgacc ctctttgctg ggacctgtga agtcaaaata cggtttacag
     2161 gaaagggtgg gcacgcagca tttccccata ccgccaatga tgccttggtg gcagccagct
     2221 actttgtgac tcaggttcag tcggtggtta gtcgaaatgt cgacccaatt gagggagctg
     2281 tggtgacctt cggctccatg cacgcgggaa cgaccaacaa tgtcattgcg gaaacggcct
     2341 tcttgcatgg caccattcgg gctttgaccc agagcatgag tcttctagtg caaaagcggg
     2401 tgcgtgaagt tgcagaagga atcgccctgt cctttggagt agacttggaa atcgagctca
     2461 atcctagcgg ttatctgcct gtggaaaata atcctcagct ggcggatgaa ctcatgacct
     2521 actttgatgg cattgacgga gtggagatga ttgactgtcc acctgccatg acgggtgagg
     2581 acttcggcta tctgctcaac aaggttccag gtgttatgtt ctggttgggt gtggatacgc
     2641 cttatcccct tcacaatcca cgtctcagcc ccaaggagga agtgcttccc tttgctgtgg
     2701 ataagttgag tgattttttg aaaatgaaag caagatagac tggttttcca gtcttcttct
     2761 gaaaagaaag gagtttctgt ggataaaaag agcattcggc aagaggtctt gcagagcttg
     2821 aaaggcctgc ctagtagtca gcgagcaaga tggaatcagc aactaacgga acgcctcctt
     2881 gcttcggagg catatcaagg cgcaaagtcg cttgggacct acctttccat gccccatgag
     2941 ttcgacactt cttacctgat tgaacaggct caaaaggatg gtaagcagat tttcatccct
     3001 aagacctatt cacaaggacg catggatttt gtagaatata atcctgatga tttggtgaaa
     3061 tctaggtttg gagtttggga acctgggact tattcacaac ctgtggataa gtctgtggtt
     3121 aagttgatcc atgtccctgg tttagcttgg aatcaagcgg gttttcgagt gggctacggt
     3181 ggtggttttt atgatcgcta cctagtagat tatcagggag agacggtatc gaccttggca
     3241 gactttcaaa tctatgattt cgaaccagat gtttttgata ttccagtaaa ggagttgttg
     3301 atttttgaag aacttttttg ataagcgcta tcctgtgacc aatggcttgt tggctatcac
     3361 ggctcttgtt tttcttttga tacaagtatt tcgcttcgga cagacgacgg ctgcctatac
     3421 gatttttgaa tttggtggta tgtttggtga ggtagtgcgt tatgatccga ctcagttgtg
     3481 gcgcttgatt tcccctatct ttgtccacat tggtttggag cattttatct ttaacagtat
     3541 taccttgctt ggtttgggtt atcaattaga aggactgttt gggtcaaggc gtttcttcct
     3601 gctgtatatc ttgtctggga taatgggcaa tctttttgtt ctctttttta caccagatgt
     3661 agttggtgca ggtgcctcga cctcgctctt tggtcttttt gcagctatgg cacttttgag
     3721 aaaatttagt cgcagccctt atctgcaggt tcttggtcaa cgctatatgg tccttttggg
     3781 attgaacttg gtcttgggac tttttaatcc aaccattagt atggcaggac atattggagg
     3841 agctgttgga ggttgcttgg tcgtgatgtt ccttccacct cttgtggaaa aggatctttt
     3901 tacaggaaaa cagatttttt tcagtttcat tggctatgtg ggtttgatcg ctttgctact
     3961 aggtatattt tatgtgacat aaaaaaacta gcgcttgcta gtttttcttt gtatctaatt
     4021 ttttaccaag atcgatcaag tattgtttca aatcatcttt tacttgaggg tgttggaggg
     4081 cgtagtcgat agaagttttc atgaaaccga acttatcccc aacatcgtaa cggttgcctt
     4141 tgaattcacg agcaaacacg cgttgcgttt tgttcagagt atcaatggca tctgtcaatt
     4201 gaatctcgtt cccggcacct ggtttttggt tttctaaaat ctcaaagatt tcaggagtga
     4261 gtaagtagcg tccgataata gcaaggtcag aaggagcatc ttctggtttt ggtttttcca
     4321 caaaggtttc tacactatag agaccgttga caccttcacc ttgtggagcg ataacaccgt
     4381 atgcagaaac ttcttcatgt ggaactggca taacagcaat ggttgaagca tgtgtttttt
     4441 cataatcgtt catgagttgc ttggtcaatg ggacagcttt tgtatctgtg atgtccatga
     4501 ggtcatcgcc gagcatgaca acgaaaggtt catttccaac aaaggcttta gcttgaagaa
     4561 tggcatcacc aagtccacgt ggatggcttt gacgaatgaa gtgtagtcga atgcctgttg
     4621 tctcatcaac aagtttcaac aaatcatttt tgcctttttc tttgaggttg tattccaatt
     4681 caaagtttga atcaaagtgg tcttcgatag aacgttttga tttaccagtg accaccaaaa
     4741 tatcttcgat accagagcga agggcttctt caacgataaa ttgaatagtt ggtttatcaa
     4801 caattggtaa catttctttg gcaagagcct tagtagcagg caagaaacgt gttcccaaac
     4861 ctgctgcagg gataacggct tttctaactt tttttgtcat aatgcaatct cctttttatt
     4921 aagaccattc attttcgtgg cggaattcgc cggacatgat ttctttaata gcatcttgta
     4981 tgctagcacc ctggtaaatg acgttgtaaa tggcttgtgt aatcggcata taaacgccca
     5041 attcctgtgc taattcatag gcagccttgg tagtagaaat tccttcgata accatgccca
     5101 tgttggcttc gatatcttcc agtttttcac ctttaccaag caagtcacca gcccgccagt
     5161 tgcgtgagtg aactgaggtt cctgtaacaa tcaagtctcc gacaccagaa agcccactat
     5221 aggtcaaggg atttgcgccc atagcaacgc ctagacgtgt gatttctgtc aaaccgcgag
     5281 cgataatagc tgccttggca ttgtcaccat atcccagacc gtgaagggcg ccagcaccta
     5341 cagcgatgat gtttttcaaa gcccctgctg tttccacgcc aatcacatcg ttattagtgt
     5401 agaggcggaa gtagcggttg ctgaagagat tttgcacgta ggttgcagtt tccaaatctt
     5461 ttgaagctgc agaaatcaag gtcaagtcac gaacgatggt ctcttctgca tggcttggtc
     5521 cagaaaccac aacgatttct gaacggagat ctgcaggaat ttcttcctcc aagacctctg
     5581 acaagcgctt gtgactatca ggctccagac ctttagaagc gtgcatgaca accactttgt
     5641 gtttaagggc ttgagcaact tgtttggcaa ccaagcgggt tactttggtt ggtacaacga
     5701 agaggacagc atccacaccg tctagggttt ctgccaaatc cttgtagcct ttgattttct
     5761 cgtctaggac gatatctttg aagtagcggg tattggtgtg ttgcttgttg atttcatcga
     5821 tttgctctgg aatatttccc cagatacgaa cagaatgtcc gttatcgttg aggacctggg
     5881 caagggctgt tccccaagac cctggtccta gaacagcaat ggtttgtttc tccatacgat
     5941 tcccctgtgt aagtattttc tattattata acatagttgc atttttttgg aaaatagcag
     6001 agccaaaact tgacaatagt tcctaagaga actataatag ttctcatgct aattaattga
     6061 ttggaaagga gtcatcgtgg gacataccat tgcagatttt cggaacttgc tcaatcagat
     6121 tgaacaaatc agtgaaacca ttgcaaaaga atacgatgtg gagcacttgg ctggtccaca
     6181 gggctgggca ttgcgtttca ttgcggaacg gtcggaaacc gaaacctttg taaaagatat
     6241 agaagcggaa ttaaagattt ccaaatccgt tgccagcaat ctggtcaagc gaatggagaa
     6301 aaatggcttt atccaagtcc tgccttctca ggttgacaaa cgctacaagc ggttggtttt
     6361 gacagagaaa ggacaaggaa aaatctgtca cctgaaagcc ttccatgaag aaatgcacca
     6421 ttcacttttt tggggcattc aaaaagaaga ctttgatttg gtcaaacagg tggctaatca
     6481 attaaaagaa aatattcaac actataagga gaagaatcat gtttaaagaa gccattttac
     6541 gttataaatg gtacgcctta gcatcggtct tgttgacgtc aattgtcgta gcaacgacct
     6601 tgatgcaacc tagttatttg caggatgttt tgacagcagt cttggccaat gacaaggatg
     6661 aaattgttcg tgtgggcaaa ttactgctga ttattgctgg aactggtctt ttggcagggc
     6721 ttgtcaatac cattgctgca gcaaaaattt cacaaggggt atctgcagat attcgtgaga
     6781 agacttttcg gaaaatccaa agtttctctt atgccaatat cgaagagttt aacgcaggga
     6841 acttggttgt tcggatgact aacgatgtca atcaaatcca gaaccttgtc atgatgctct
     6901 tcacagtgtt gatgcgggtt ccattgctgt ttgtcggagc cttcatcatg gcggtgcgga
     6961 ccatgccaga actctggtgg atgattattc tcatggtggt cttgattatg gccattatgg
     7021 cggttgtcat ggggcagatg ggaccacgtt ttggaaaatt ccagaacctc atggacaaga
     7081 tgaacagtat tgctaaggaa aacctacgtg gaatccgtgt ggtcaaatcc tttgttcagg
     7141 agaaaaatca gtatgccaag ttcaagaaag tatctaatga actcttggac ctcaatctct
     7201 ttatcggcta tggttttgct atcttgcaac ccttgatgat gtttatctct tatatggcga
     7261 tttttgcgtc cctctacttg gtgtccggga tgttggaaac caacatggag gcagttggtg
     7321 gctttacttc ctttatgagc tacctcatgc aaatcatgtt tgccattatc atgactagtt
     7381 tcatgggcat gcaggcttca cgtgctgcca tttctattaa gcggatcagc gaggtcttgg
     7441 atacggagcc tgcaatgacc ttcaaggatg tggcggatga agaattgact ggtaagattg
     7501 tctttgacaa tgttagcttt acctacccac atgatacaga gccgactttg aaaaatatct
     7561 catttgagat tgagccaggg caaatggttg gtgtggttgg tgcaacgggt gcgggtaaat
     7621 ccactcttac ccaactgatt ccgcgtttgt ttgacccgca agaaggaaca gtgtccatcg
     7681 gtggtcggga cttgaaagaa gtcagccaga acactctgcg tgatacggta tcgattgtct
     7741 tgcaaaaggc tattctcttc tcgggaacca ttgcggacaa cctgcgtcaa ggggcacctg
     7801 gtgctgatcg tgcaagattg gagcgggccg caggtattgc ccaagccaaa gaatttatcg
     7861 accgcttgga tgatacctat gagagccaag tagaagaacg tggaaataac ttctctggtg
     7921 gtcagaagca gcggatgtcc attgctcgtg gggtgattgg tgagcctaag gttttggtct
     7981 tggatgactc aacttctgcc ctggatgcca agtctgagaa actggtccaa gaggctctca
     8041 accatgattt gaaggggaca accactgtca tcgttgccca gaagatttct tctgttgtca
     8101 aagctgataa gattttggtt cttgacgaag gtcgtctgat cggccaaggt acccacgccg
     8161 agctggtagc gacgaacgat gtttaccgtg aaatctacga aacacagaaa gggagggagg
     8221 aatagatgaa gacgttacgt tttttctggt tttatttcaa acgctataaa ctgtcctttg
     8281 ctgtgatttt tctagccatt gtggcagcga cttacttgca ggttaagaca cctgttttcc
     8341 ttggaaatgc cattgcggag atggggaaaa tcgggcaggc ttacttcatg gccaatcaaa
     8401 ctggtcaggc tgactttcag ccagacatgg ctgattttaa tggggttatg ctcaatcttt
     8461 tctttgccta tgcggcgacg gttgtggctt ccttgattta cactctcctc ttcacgcgta
     8521 tcgtggctca ttcgaccaac cgtatgcgta agggcttgtt tggcaaactg gaacgcttga
     8581 cagttgcctt ctttgatagc cacaaggacg gggatattct ttctcgcttt accagtgatt
     8641 tggacaatat ccaaaacgct tttaaccagt ccttgaccca agtggtgacc aacatcgctc
     8701 tttatgttgg tatggtcatc atgatgttcc gtcaggatac tcgcttggcc ttggtgacca
     8761 ttgcttctac gccagttgct ttgattgccc tagtgattat cattcgcctg tcacggaaat
     8821 atactgataa gcaacaggct gcggtatcta agcttaatgc atacatggat gagaagattt
     8881 ccggacaaaa agcgattatt gtacaaggtg tgcaggaaga gacaattgat ggtttcttgg
     8941 aactcaatga agaagttcgt cgtacgacct tcaagggacg cttgtttggt gggattctct
     9001 tcccatttat gaatgggatg agtttggtca atactgccat tgttatcttt gcaggttcca
     9061 gcattgttct caacgatagt tcgctagaaa cagctgccgc acttggtctg gtggtgactt
     9121 ttgttcaata ttcgcaacag tattaccagc caatcatgca ggttgctgcc agctgggcag
     9181 aattgcagct agctttcaca ggagctcatc gtattcagga aatgtttgat gagcctgagg
     9241 aagttcgccc tcaaaacgct ccgctattta tcgaattaaa agaaggtgtt gaaatcaagg
     9301 acattgactt tggctacctg ccgggtcaga aggtcttgga caaggtgtca atctctgctc
     9361 ctaagggcaa aatggtggca gtcgttggtc cgacgggatc tggtaagact accattatga
     9421 acttgattaa ccgcttctac gatgtcaatg gtggtagtgt ggcttttgac ggtcgtgata
     9481 ttcgggaata tgacttggac agcttgcggg ataaggtcgg cattgtcttg caggagtcgg
     9541 ttcttttctc aggtactatt gcggacaata ttcgctttgg tgatgagagc atttcgcagg
     9601 aaatggttga aaccgcagct cgtgccaccc atatccacga ctttatcatg agcttgccag
     9661 agggttatga aacctttgtg actgatgatg agaatatctt ctcgacaggt cagaaacagc
     9721 tgatttccat tgcccgtacg ctcttgacag atccacaagt cttgattttg gacgaagcaa
     9781 cctcaaacgt tgatacggtg acggaagcca aaattcaaaa ggctatggag gctattatcg
     9841 ctggacggac cagcttcgtc attgcccacc gcctcaaaac catcctcaat gcggacgaaa
     9901 tcatcgtcct caaagacgga aaagtgatcg agcaaggcaa ccacagccaa ctcctcaagc
     9961 tcaacggctt ctatgccgaa ctctaccaca accagtttgt gtttgagtaa agttgaaaac
    10021 cccagccact aggttggagt tttgctttta gcctacgaat aaattataat agagagcgta
    10081 ttatgcagga agaaattgaa gggaaactac tatgaaaatc cgtggttttg aactggtcag
    10141 ccagtttact gatgaaaatt tattgccaaa acgtgagacc gctcatgcag caggttatga
    10201 cctgaaagct gcggagagga tcagcttaga gcctggtgag attaagctgg ttccaacggg
    10261 tgtcaaggcc tatatgcagg caaacgaagt cctctatctc tacgaccgat cgtccaatcc
    10321 tcgcaagaag ggcttggtcc tgattaactc ggttggggtt atcgacggcg actactatgg
    10381 caatccagcc aatgaaggcc acatctttgc ccagatgcga aacatcaccg aggaaaccgt
    10441 cgtggtggaa gctggggagc ggattgtgca ggctgttttt gcccccttcc tcttggctga
    10501 cggtgaccag gccgacggcg ttcggacagg tggatttggc tcgacaggga aatagactac
    10561 tatgcagatt ctttttgtgc ggcattccga gcccgactac agcatgtttg accagcatga
    10621 taatcctcgg ctgtatgcag gttttgggcg ggatttggct cctttaactg aaaagggaag
    10681 gactttagct caggaaattg ctagtaatcc tatcttttcc caagctcaag tagtcattgc
    10741 ttcaagcgtc acacgggcct tggagactgc gacctacatt gctcatgccc agcaactacc
    10801 tcttctggtc gagccctttt ttcataagtt gcgaccagat atgacggggc aaaatgccag
    10861 tcaagatgag gctgtcttag ctcatcgatt atttttggaa aatggcggag cggtgcccga
    10921 gacttcttct gctcgctatg agactgctgc ggagatgaga gagcgatttt tacaggccct
    10981 tgaaaaatac aaagcctatg accgaatcgt tatcgtctgt cacggtatgc tgatacgcca
    11041 gtttgttccc aaagaaacca tagcctactg cgaaatccta gaatataatc tataggagga
    11101 aatcatcatc gctaagaaaa aaacaacctt tgtctgtcaa tcctgcgaat accactcgcc
    11161 caagtatctg ggccgttgcc ccaactgtgg ctcctggtct agctttgtcg aggaagtgga
    11221 agtcgctgaa gctaagaacg agcgggtcag cctgacaggt gagaagaccc gtccgatgaa
    11281 gctcaatgaa gtatcgtcca ttcaagtggc tcgcactaag accaacatgg aagagttcaa
    11341 ccgtgtcctc ggtggcggcg tggtgccggg cagtctggtc ctgattggag gcgatccagg
    11401 gattggcaag tccaccttgc tcctgcaagt atccactcag ctgtccacca ttggcaccgt
    11461 cctatatgtg tcgggggaag agtctgccca gcagattaag ctccgtgccg agcgtttggg
    11521 cgacatcgac agcgagttct atctctatgc ggagaccaat atgcagagca ttcggactga
    11581 gattgagaaa atcaagccag atttcctgat tatcgactct atccagacca ttatgagccc
    11641 tgacatttct agcgtgcaag gttctgtcag tcaggtccgt gaagtgacca atgagcttat
    11701 gcagattgcc aagaccaaca atatcgcaac ctttatcgtc ggccacatga ccaaggaagg
    11761 caccctggct ggaccgcgga ccttggagca catggtagac accgttctct attttgaggg
    11821 cgagcgtcaa cacaccttcc gtatcttgag ggcggtcaaa aatcgctttg gctccaccaa
    11881 cgaaatcggt atttttgaaa tgcagtcgca gggcttggtc gaagttctca atccaagtga
    11941 ggtctttctg gaagagcgtc tggacggagc gactggctcg gctattgtcg tgaccatgga
    12001 gggcacccgc cctatccttg ccgaagtgca ggctctggtg accccgacca tgtttggcaa
    12061 tgccaagcgg accacgacag gcttggattt caaccgtgcc agcttgatta tggcggtttt
    12121 ggaaaaacgg gccggtctgc tcctccaaaa ccaagatgcc taccttaagt cagcaggcgg
    12181 tgtcaaactg gatgagccag ctattgacct agcggtcgca gttgcccttg cctccagtta
    12241 caaggacaag ccaaccaacc cacaagagtg ctttataggc gagattggcc tgacagggga
    12301 aatccgccgc gtcaatcgga ttgaacaacg gattaacgaa gccgccaaat tgggctttac
    12361 caaggtctat gccccaaaaa attccctgac aggtatcaag gtgcccaagg aaatcaccgt
    12421 tatcagcgtg accaccattg gcgaagtctt gcagaaagta ttcaacttat gaaatcattc
    12481 gggagtgaca gctagtcgct cctctttttg cgacaaatag tcgggaatgt gataagctag
    12541 gtctaaccta tttctgaaaa tttcagaaat tctcatcaga caaggaggtc ctatgtctta
    12601 ttttcaaaac tttatgaagg ccaacaaggc ctatgttgac ctgcatggtg attaccattt
    12661 gcctcttcgt ccaaagacca aggtggctat cgtgacctgt atggactcac ggcttcacgt
    12721 ggctcaggcc ttgggcttgg ctttggggga tgctcacatt ctgcggaatg caggtgggcg
    12781 cgtgacggag gacatgattc gctcgctggt tatttcccag cagcagctcg gcacacggga
    12841 aatcgtggtg ctccaccata cagactgcgg tgcccagacc tttaccaatg aagaatttgc
    12901 ggtccaactc aagcgagatt tgggagtgga tgtggctggt caggattttc ttccttttac
    12961 agacattgaa gaaagcgtgc gggaggatat tgctctcttg aaacaatctc cgctcatacc
    13021 tgacgacgtt gaaatttctg gtgcggttta tgatgtggat acaggtcgta tgacagaagt
    13081 tatataggaa tgctcaggaa gttcggtttt tcctgtaaat tttatctgaa tgaccgagaa
    13141 atccttgaca agtttttttg aatgagataa aattgtatta tcacaacaga acaagcggag
    13201 agataaatga tgcttggttt attctagctt gttcttggtt tattatggct atcctgtggt
    13261 taacaggacc tttcgtaaaa aataggagtc aactatgtca gacaatcgga tgaaatatac
    13321 tatcgatagt aatatgcagt ttcctttggt ggaaatcgcc ttggaagctg gtgaatcagc
    13381 ttatattcaa caggggagca tggtctacca tacgccgagt gtgaccttga ataccaagct
    13441 caatgcgcgt ggtggttcag gttttggtaa attgatgggg gccatcggtc ggtcaatggt
    13501 atcaggcgaa tctatgttta tcacgcaagc catttccaat agtgacgatg gaaaaattgc
    13561 ccttgcgcct tcaacaccag gtcaggttat tgccttggaa cttggggcag agcaatatcg
    13621 actaaatgat ggtgccttcc tggcccttga tggttctgct caatataaaa tggaacgcca
    13681 gagtgttggg aaagctttct ttggtggtca gggtggactc tttgtgatga cgacagaggg
    13741 acgcggaaca cttttggcga atgcgtttgg ttctattaag aagctaactt tggatggtgg
    13801 aagtatcacc attgacaatg ctcatgtggt tgcttggagt cgtgatttgg actacaatat
    13861 ccatatggaa aatggtttcc tccaatctat cggtacaggt gaaggaatcg ttaatacctt
    13921 tactggttat ggagaaatct atgtacagag tttgaacatt gagacctttg ctcaggtcat
    13981 tggcaatcat attgtcggtg caggtggtga tggtggtggt ggaagcacat cgttgctgga
    14041 tgcgattttt taagaagaaa aactctgcaa ttttcaaaat catataataa aaataaagtc
    14101 cctcgcgtaa tgcaagggac ttttcttagt ttatttctac cacttacctg tctaattttg
    14161 ccacttactg aaatgccctt gtaattggat gtcgaactgg tataatagag ctatcaaaaa
    14221 ggagggagct atgaaagtta ggattgaatt tgatgacagc ttagatcatg ttgaagttgt
    14281 tatccgaacc agccagctgg gaccagagat tgaacagatt cagcaagctt tgcaacaagt
    14341 tagtcgtccc tcgcttgttt tttacaaggg gagcagcgag tattttcttt cattgggtga
    14401 catacttttc tttgaaacgg acggaaccaa gatttttgct catacaggcg atgatgccta
    14461 cgaggttaaa atgaaactct atgaacttgg ggagcatttg cccatctact tttgtcgggt
    14521 ttctaaatca acgattgcca atgctagagc tgtgtattca ttggataagt ctttttcagg
    14581 aactagtcgg atttccttct atcagaccca caaggaagtc cacgtgtcgc ggcattatta
    14641 tcatttatta aaagaaaagt tacgagaagt gaggtaggga gatgaaacgt ctattaattg
    14701 gagctgcagt tataggactg gcggttttgg tcttgttgag ggattcattg ggtttgcatt
    14761 tggcaatgcc cttttggacc actgtctggt ttgtattaac ctttgtgaca ggttttcacc
    14821 gcttggtaaa gttggattgg cttgccagta tcttttgttt cggcctagct tttatagctg
    14881 ccaactctgt ctatgaatgg gtggagtttg ggacttggaa catgtttctg tcgcttgtct
    14941 tactctgtct tggcttgaaa ctaattttta aaccaaggaa gcgcagactg actcatggag
    15001 ctgtcacagg ggtgattggc gacaagggac gggaaacggc ttttggcttt tcaactcgct
    15061 atattcatga cgataatttt ctccatgata gtgtggaagt agccttcggc tctagtacag
    15121 tttactttga tcaggcgatt attctgggag ataaggctga atttcatatc gatgcggcct
    15181 tcgcgtcagt tgatctttat ctgccagcaa attggcaggc ggtcgtggag ctagatagtt
    15241 ccatgtctgc tgtcaataac tatgcaactg gtatgggaga aaagatgcta catatcacag
    15301 gagatatggc cttctccact ttgaatatct attacaccta gagtgaacaa agagcagtct
    15361 atttaggctc ctctgtagaa taaaaagtcg gaatattctg gaaattattc aaaagaaagg
    15421 gattatcatg aaaaagattt tgaaaaatgc tacttatcta tgggtactga ctgcggatat
    15481 gttgtccaat tttggcgatg tggtctatta tctggccttg atgaactatg ttttgctggt
    15541 gcccaacagc cgtctggctc tggcaatcgt gaccttctcg gaaatcttcc ctagctttat
    15601 gggactcttt acaggctatc tggcagacaa gacggtcaac aaaatcagta ccatcaagct
    15661 gactctgctc tttcgtgttg tactctacct catcctcggc ttctgcatgg gctttgagcc
    15721 agccctctgg attgtcgtgg tggctgcaac tttcaatgtc tttgcagact tcgctggctt
    15781 ctatgaaaac ggcctctata cacctctggg attacgcgta gcgcccaagg aagagcggga
    15841 gcagtactcg gcctttcgcc agaccgtgac tagcctcctc aacattgcct ttcaggcctt
    15901 ctctgccctc ttggtcggcc tcctctccta ccaaaacctg gcctttctca acgccggcac
    15961 ctttttagcc tccctcctca tcatgcagct gctgacgcca gcctttcgca aactcctgac
    16021 ggagcagcct ttgaaaatag ccgagcagcc gagccagccc gagcaggaaa ccaagggacc
    16081 gggcattcta gcttctttca agcaagcaat cgtggagctt cgcaagattc ccgagttccg
    16141 tctggtcctg attactagcc cccttatcaa tgcctgcgga gctattctct atcctatttt
    16201 ggtcctcttg attagcgaag acccaggcct tgtcttcctt aatgttgaaa caacccttgc
    16261 cctgaccatt ttgattttct ttgttggaca tattttgggg tcgaccttgg tatttaccct
    16321 cttcaaaaag accagcatgg tgacgctgga agtggcagct actttctctc tacttggcgt
    16381 gtttgtcgga atgctactac accagttacc tgtcattttc ttcttcctta ctacaatggg
    16441 gattagttca ggagctagcg gacctaagtt taatgctaag tttgtcaatt ctatgccaga
    16501 ggagcaatta gcgaccatcg gcggagcggt atcaacctat tttatgctag gtcaagcctt
    16561 tactcgacta ttggtttcgg gattggtctt ggtgctaaca gtcgatcaga ttagcggact
    16621 tttcctaacg acaactggtt tgttagtcct ctatgtcctc tactggctgg cacgcaacca
    16681 aaaaacacct caaaatcagt ctgtttagac tgatttttct gttatctggg ggtgttctat
    16741 gctataatgt tcttgattga aattttacag gagagaaaca tgactaaacc aattcgtgtg
    16801 cgttacgcac caagtccaac gggacttttg catatcggaa atgctcgtac agcattgttt
    16861 aactatcttt ttgcccgtca tcacggcggt actttcctta ttcgtatcga ggacacagac
    16921 cgcaagcgcc atgtggaaga cggcgagcgt tctcagcttg aaaacctgcg ttggttgggg
    16981 attgactggg atgagagtcc agaaactcat gagcaatacc gtcagtctga gcgtttggat
    17041 atttaccaaa agtatgttga tcagctcttg gcagaaggca aggcctacaa gtcttatgtg
    17101 accgaagaag agttggcggc ggagcgtgag cgtcaggaag ctgcgggtga aactcctcgc
    17161 tacatcaacg aataccttgg tatgtctgaa gatgaaaaag cggcctacat cgcagagcgt
    17221 gaggcggctg gcattgtccc aacggttcgc ttggctgtca acgaaacagg tatctacaag
    17281 tggaatgaca tggttaaggg cgaaatcgag ttcgaaggtg gcaacatcgg tggtgactgg
    17341 gttatccaga aacgtgacgg ctatccaact tacaactttg ccgtggtggt ggacgattat
    17401 ctcatgaaaa tctcgcacgt tatccgtggg gacgaccaca ttgccaatac acccaagcag
    17461 ctcatggtct acgaagcact tggttgggaa gcaccagaat ttggtcacat gacgcttatt
    17521 atcaattctg aaactggtaa aaaactgtct aaacgtgata ctaacaccct tcagttcata
    17581 gaagattacc gtcgtaaagg ttacatgcct gaagctgttt tcaactttat cggtcttttg
    17641 ggttggaacc cgggtggcga ggaagaaatc ttctcccgtg agcaatttat ccaactcttt
    17701 gacgagaacc gcctcagcaa atcgccagct gcctttgacc agaagaaaat ggactggatg
    17761 agcaatgagt acatcaaaaa tgctgattta gaaactattt tcaaccttgc taagccattc
    17821 ttggaagaag cggggcgttt gacagacaaa gcagaaaaat tggtggaact ttacaagcca
    17881 caactgtcat ctgcggatga aatcgttggt ttgacagacc tcttcttctc agatttccca
    17941 gaattgactg cggaagaaaa agaagtgatg gcaggcgaaa cagtaccgac tgttctcaat
    18001 gccctcaagg aaaaattgga agccatgacg gacgaagatt tccaaccaga taacatcttc
    18061 ccgcaaatca aggctgtcca aaaagaaaca ggcatcaagg gcaaaaacct cttcatgcca
    18121 atccgtatcg ccgtttcagg cgaaatgcat ggaccagagt tgccaaatac catttacctg
    18181 ctcggccgtg aaaaatctat ccagcatatt gataatatgt tgaaatcttt gtaagacaag
    18241 taatccccgc tgtcctgtga cagcggggat tttgctataa ctgataacta taacagttgt
    18301 attgaaaacg gtataacgat tttttgcaaa actgtgttat cataaataaa tcattactat
    18361 ttaggagagt ttatggaaaa tcataatttt gaaaatcaag ggacctttaa tcgagagatg
    18421 aacagtcgtc atttgcagat gttgtccatc ggcggggtta ttgggacagg attgtttttg
    18481 agttcaggct ataccattgc acaggtagga ccatttggag ctgttgcagc ctatcttttc
    18541 ggagctgtca tggtctattt ggttatgttt tctttgggtg agctttcggt agccatgcca
    18601 gtcacaggtt cttttcatac ctatgcgacc aagtttatca gtcctggaac aggatttatg
    18661 gtggcctgga tgtattggct ttgttgggta gtcgctctag cttctcagtt cgttggagca
    18721 gcacagctta tgcaacgctg gtttcctagt gtgccgattt ggatttttgc gacgattttt
    18781 gcagttattg tctttgggct aaatactctt tctgttggtt ggtttgccaa ggcggaggat
    18841 gcactctcgt ctatcaaggt ctatgccatt gcagccttta tcgtactcgg aaccttagct
    18901 atttttggta ttttgccatt tgaggggacc aatgctgcgc tgctatttaa caatatcaca
    18961 agtaacggct tacttcctaa cggtctggtt ggttttatca cggtcatgtt gtccgttaac
    19021 tatgcctttt caggtgtaga aatgatcgga attgccgctg gagagactga caatcctaag
    19081 aaagccgtgc cacaagccat caagtcaaca atcggtctct tggtcatctt cttcgtcttg
    19141 accattgtag tcttggcagc cctacttcct atgtcagaag caggtgtgac agaagcgcca
    19201 ttcgtacttg tattggataa aatcggtttt ccttacgctg cagatattat gaactttatc
    19261 atcttgacag ctattttatc ggcctctaca tcagggctat acgcttcaag ccgtatgctt
    19321 tggtccttgg caaatgaagg catgattagc aaggaattgg taaaaattaa taaacacggt
    19381 gttccaatgc gtggcatgat tttgtccatg attggtgtag tcatcgcctt gattgcgtca
    19441 atttatgcag aagatacaat cttcctggcc ctggtttcta tcgctggttt tgcggttgtc
    19501 attgcttggt tggccattcc attggcacaa atcggcttcc gtcgtgaatt tttgaaaact
    19561 catagtgaag atgaactgga atacaagacg ccgttctcac cgaccttgcc atggattacg
    19621 gttattctgc tagttatttc catcatcgga attggctggg atccttcaca gcgtgccggt
    19681 ctttacttcg gtgttccttt catgattggg tgctatattt atcattacat tcgctttaaa
    19741 aagtggtagg agggttcaag tatggggcgt tttaaagaac tactagaaca aaaggaatat
    19801 atcattttgc acggtgctct tggaacagag ttggagtttc gagggtatga tgtatcgggt
    19861 aagctttggt ctgctaaata tcttttggaa aatccccagt acatcaagga tattcacaag
    19921 gattatattc gtgccggggc agacttggtg acaacctcca cctatcaggc aacctttgaa
    19981 ggattagcag aagttggctt gtcacaagca gaggcagagg acctcatttg cttgaccgtt
    20041 gatttggcga aagaagcgcg tgatgaggtc tgggcagaat tgtctgaagc tgaaaaagca
    20101 caacgaacct atcctcttat ttcaggcgat gtcggtccct acgcagccta tttggccaac
    20161 ggtgctgaat atacaggcga ttatggcaac attagtctgt cagaattaaa agacttccac
    20221 cgccgcagaa ttgaactcct cttagaacag ggggctgaac tcttaggctt ggaaaccatc
    20281 ccaaatgttc ttgaagcaca agccttagta gagttgctgg cagaggattt tccagaggct
    20341 gaagcctata tcagcttcac atcacaggac gggcagtcga tttctgacgg aaactctatt
    20401 gaaaaaatag cagagctgat caacagcagt gagcagattt tggcggttgg tcttaactgt
    20461 acagcaccgt ctctttaccc agcctttctc agtcagttga gagaaaaaac ggataaacca
    20521 tttgtgactt atccaaactc tggagaagtc tatgatggtg ccactcaaac ttggaaggaa
    20581 aaagcagacg acagccattc ccttctggac aacacacttg aatggcacga actgggtgcc
    20641 aaggtagttg gaggctgctg tcgtactcga ccagccgata ttgctgacct agttgcaggt
    20701 ttgaaataaa agtatccccg ctgtcctgtg atagcgggga tttgtctgtt aggggaattt
    20761 agctttctaa aaacagcctc tccacatagt ctttctgact tggaatgact agctctgttt
    20821 ccaggaaatc tttcaacttt tcttgtggga cccagatgta gttgctggtt tcattggctt
    20881 ggagttggat agcagctttg tcccagtcgg tttcagccca gtagcagtgg aaaatgcact
    20941 ggtcatcatg ggcgacaaag tgtgtatggt ggcggagttg gtcaactgtc agctcaatgc
    21001 ctgtctcttc gcggacttcg cgtaatatgg cctgctctgc tatttcccca aacaaagctg
    21061 aacctcctgc tgtcgcttca taatagttag ggtaggaggg tttggtgctg tcgcgtttca
    21121 tgaagagggt actgccgtcg tggtggcgga tgatgcactc gacgaccagg tggtagaggc
    21181 cgtcgggaat ggattctccg cgtgtgagag tgtggtcggt cagctgaccg tcggctgtgt
    21241 aggcgttcca gatttccatt tcattctcct gtcaattttg tagttattca gtatagcaca
    21301 tctgtaagtg taaggcaaca tgttttgttt ttgtacggac aagtgttata ctggggctac
    21361 taactcaaag gagaaatcaa tgcaaactat agtcccacat ctctggtacg atacagaggc
    21421 aaaagaagcg gtggctttct atgtagaact cttcggaggc aagattgact ggacctacac
    21481 cattacggat acgccttcgg gagattcgga tttgattcag tttcaactgg gggatatgac
    21541 cttggcggct attagtgcgg gtccatactt taagctcaat gagtccatgt ccctcatggt
    21601 caatgtagcc agcaaggatg aagtgacacg tttgtaccaa gccttgtcag aaggcggtcg
    21661 tattcttatg cctttgggag aatatccctt cagcccttac tatgtctggt tggaagaccg
    21721 ctttggtctg tcttggcaac tgtcttatgc accggacttg gacaagtcct atcagtttga
    21781 catcagtctg ctcttctcac aggaacaggt tggtttggcc cagcctatgt tggactacta
    21841 caaggacaag ctccctcagg ctagtgtcgg tcaactttcc tactacggtg aaggggaggc
    21901 tgctgttgag gctgctaaac tgaattatgc agaacttctt gtcggtggac agaaaatgat
    21961 tgtcatggac cacggttacg gtggtgaagc ttcattcaac gaagccttct cgctcatggt
    22021 ctatgtagac agtcaggaag aagcagagag ctggtatgaa aaagtgtctg ctgttccaga
    22081 agcggagatt tgcggttggg ccaaggacca gtttgggatt tcttggcaga tcgtaccgcg
    22141 tattttgatg gaagcatatg atacggctag cccagaaaag gtcaaggcag tcaatgcagc
    22201 ggtgatgacc atgaaacgtt tggacattgt ggctattcaa gcattgctaa actagcagat
    22261 gataacggag actgttctgc agtttccgtt ttttggttga gaaaaggttg atttacagga
    22321 attttggtat aatggaaaaa agtgtacgaa aggaatgtgt atgaaagcaa cagaacgacg
    22381 taagaaaatc ctatcccttt tacgagaaag tctcgatccc cttgcagcta attatctggc
    22441 gaaagaattt ggagtgagtc ggcaagtaat tgttggagat gtagccttgc ttcgtgcgga
    22501 gggagaagct gtcttggcaa ctccaagagg gtacttactc caatcttctt tgccatctac
    22561 tgaaggagcc tacattcgaa agatagcttg tcaacatggt ccagaagagg tagaaaaaga
    22621 attgacaatc ttgctagagg gtggagctca aatattagat gttgaaattg agcatcctat
    22681 ttacggctta ttatcaggca agctgaatat tgcaagttta gaggatagag atcatttttt
    22741 ggatgccttg ggtcaatatc aaggtgtgtt actgagtaat ttaacagaag gagttcatac
    22801 acatacagtc tctttcccat ctgtgcaagc ctataatgaa ctttcagcag ctttaaaaca
    22861 tgcaggtatt ttactagaaa atcaataaac cttacaagtg tcttgacacc tgtaaggttt
    22921 tgttttataa tcaaaccaat agaaagagag gttcctaatg tcccaattaa cactatcatc
    22981 taaaaattca gttaagcagc tatcaattag tgcaatttta accgcatttg ccattttaat
    23041 acctttaatg atgccgatta aaattattat tggcccagca tcctatacac ttgctagtca
    23101 cattcctttg tttatagcca tgtttatttc accagctact gctatttttg ttgctttagg
    23161 ttctagttta ggctttttcc tcgccggttt tccaattgtt attgtatttc gggcgcttac
    23221 gcacctgttc ttccttacat taggtgcggt cttggtcaag cgttttccga ttctcatgga
    23281 ttctaagcgc tttttactat taggaattgg gcttaatctc ctgcatggtc taggagaata
    23341 tattgtggtg atggtgctta cttcggggca acaaacttct gctacctact ggataacgat
    23401 gcttggcttg gtgggtgttg gctcggctat tcatggattg cttgatttta gtttagctta
    23461 ttatttctgg aaaattttaa aagaacggaa aatttatcaa ccataatcag ttatgatgag
    23521 gaatatattt tagaagctgg agaatattct ctagcttttt ttggaaattt ttctggaaat
    23581 gtacgatatt tattcatttt ttaagaaaaa atgcataaat atgttgcaaa aagtataaat
    23641 atacactata atagtcacta agttttattt gctaatatat atagaaatga gaacacttat
    23701 gacaaaagaa aaattgattt tagcctattc tggtggactt gatacttccg ttgcgattgc
    23761 ttggttgaaa aaagattatg atgtgattgc ggtttgtatg gatgttggag agggcaagga
    23821 tctcgacttc atacatgata aggccttatc aatcggtgct attgagtccc atgtattgga
    23881 tgtaaaagaa gaattcgccc aagaatatgt cctaccagtc ctacaagccc atgcctacta
    23941 tgagcaaaaa tatccgctgg tatcggctct cagccgtccc ttgatttcta aaaagttggt
    24001 ggaaatggct cataagacag gagcaaccac tatcgcccac ggctgtactg gtaagggaaa
    24061 tgaccaggtg cggtttgagg tagccattgc agccctagat ccaagcttga aagtcgtggc
    24121 tcctgtccgt gaatggaagt gggctcgtga agaggaaatc atcttcgcca aggaaaatgg
    24181 tgtaccagtc ccagctgacc tagatagccc ttactcagtc gaccaaaacc tctggggtcg
    24241 tgccaatgag tgtggtgtct tggaaaatcc atggaatgaa gcgccagaag atgcatttgg
    24301 tattactact tctccagaaa atgcaccaga tactcccgag tatgtcgata ttgagtttaa
    24361 agcaggtatt cctgttgctg taaatggtga aaagttaagt cttgctaatc tcattcaaag
    24421 actcaatgtc attgctggta aacatggtgt gggtcggatt gaccacgtgg aaaatcgttt
    24481 ggttggaatc aagtcacgtg aaatttatga gtgtccaggt gctattaccc ttctgacagc
    24541 ccacaaggaa attgaagatt tgaccctggt acgggaagta tcgcatttca aaccgattgt
    24601 ttcaaatgaa ctctctaact tgatttacaa tggtttgtgg ttcaatccag caacagatgc
    24661 cttgaaggcc tatcttgctc agacccaggc agttgttaat ggcactgcaa aagtgaaatt
    24721 gtataaggga tcagccaaag tggttgctcg gaaatctcca aattcccttt atgacgaaga
    24781 tttggcaacc tataccagtg cagatacctt tgatcaagat gcagcagttg gtttcatcaa
    24841 gctttgggga ttaccaacca aggtcaatgc ggaaattcat aaaaagagct agaaagtagg
    24901 agcttatgga agcaaagaaa ttatggggag gtcgctttga agccagtctt gaggaatggg
    24961 ttgaagaatt cggagcctcc attcgctttg accaaaaatt ggccaagtat gatattcaag
    25021 gctcactggc ccatgtcaag atgctggggc aaactgggat tgtctctcaa gctgaggctc
    25081 aggtcattca agctggtctg gaagaattgc tagaggagta tgaggctggc aagttagtgt
    25141 ttgatattcg aaacgaagac attcacatga atattgaaag tctattgacg gagaaaatag
    25201 gctcagttgc aggcaaactc catacagctc gttctcgtaa cgaccaagtg gctacggata
    25261 tgcacctcta tctgaaggat acactctttc aagttgtaga caaattgacc aacctacgtc
    25321 agattttggt agaccttgca caggagcatg tggaaacaat catgcccggc tatacccact
    25381 tgcaacatgc ccagcccatt agttttgctc agcacttgtt agcctattac aacatgttca
    25441 gccgagacag tgagcgcttt gcattcaaca tgcagcatac aaatgtatcc ccacttggtg
    25501 tggcggcctt ggcagggacg acctttccga ttgaccgtca gatgacgtct gatttgatgg
    25561 gatttgccaa gccctatagt aattctcttg atgctgtgtc tgaccgtgat tttatcttgg
    25621 aatttctgtc aaatgccagt atcctcatga tgcacatgtc gcgtttgtgt gaagaaatca
    25681 tcaactggtg ttcacatgaa taccaatttg tcaccctatc cgataccttt tcaacaggtt
    25741 cttccatcat gcctcagaag aaaaatccag atatggctga gctgattcgg gggaaaacag
    25801 gtagagttta tgggaactta gttggcctac tgacagtcat gaaatccctg cctttaacct
    25861 ataataagga cttacaggaa gacaaggaag gcatgtttga cacggcagaa acagttttga
    25921 tttcaattga tattttggcg ggtatgctga aaacgatgac ggttcataag gaaaggatgg
    25981 ctcaatcgac agagaaggac ttttcaaatg ctacagagtt ggctgattat ttggctagta
    26041 aaggtccgcc cttccgccaa gcgcatgaga ttgttggaaa actggtcttg gagtgtagca
    26101 aggcaggaca ctatctccag gatgtatcat ttgagaccta tcaggctatt tcgcctctta
    26161 ttcaagcaga tatttatgat gccttgtcct ccaaagttgc tgttagtcgt agaaattccc
    26221 ttggcgggac aggttttgaa tcgattgcag accagttgaa aagtgccaaa gaggaaattc
    26281 agaacgcaaa aagcctataa acggtatgtt tattggcttt tttgaatttt gtggtataat
    26341 agaagtaatt ttgaaagatg gagtggcagt ttgaaaaaaa gctatcgtgt caagcgtgaa
    26401 cgagatttta atgacatttt tacaaaagga aacaatgtcg ccaatcggag gtttgttgtc
    26461 taccgattac ctaaagagca aaagcatttc cgagtaggtt tatctgtcag caaaaaattg
    26521 ggaaacgctg tcatgcgaaa taagattaag cgcaggattc gtcacatctt aattgaatgc
    26581 caacatcaac tggtagcaga tgactttgtt atcattgctc gaaaaggtgt agaggaattg
    26641 tcctatcaag aaatgaagca aaacctcatc catgttttga aactagctaa actataccag
    26701 gaaggtgttg tgattgaaaa agaaagttaa atgggcaggt ctactggtag catctctaat
    26761 tgttttaaca gcctgcggaa cagggccagt gaccagtcaa tctacagatg cgtgggatag
    26821 attaatttac tggtttgcca gcattattca gttcctatct atcaacggtc aaattggaat
    26881 cggtattata ctttttacca ttttaattcg aacccttctg ttgccgttgt tccaaataca
    26941 gatgaattcc tcacggaaga tgcaggagct tcaacctcag ctgaaaaagt tgcaagcgga
    27001 gtatccagga acggatatgg aaagtcgcca gcagctttat gaagcaacgc aagctctcta
    27061 caaagagaat ggcgtcagca tgagagcgtc catgattccg ctctttattc aaatgccaat
    27121 ccttttggcc ctctttcaag ctctgacacg tgttgaagcc ttgaaagtag gtcacttcct
    27181 ttggttaaat cttggggagc cggatccgtt ctttattttg ccgattctag ctgcagtgtt
    27241 tacattcctc agctcatggt tgaccaataa atcagcaatt gagaagaata tggctatgac
    27301 aattatgacc tatgtcatgc ccgtgatgat ctttttcttt gctgtggcag ctgctagtgg
    27361 ggtggctttg tattggacag tgtcaaatgc ctatcaggtt gctcaaacct tggtgttcaa
    27421 taatccgttt aaaataatag cagagcgtca agcgaaaatt gatgctgaaa aagagcgtca
    27481 ggcaaaaatc cgacgggcac agaaaaaagc acagaaaaag aaataggaaa actaggagag
    27541 agaagatgaa atttacagga gcaagtgttg aagaggccat ccagaatggc ttggtagagc
    27601 tgaatattcc tcgaaaaaaa gcacatatta ctgtggttgc gcgtgagaaa aaaggtttcc
    27661 ttggtttcgg taaaaagcca gcgattgtgg atattgatgt catcaatgaa acaacggttg
    27721 ttaaggctaa tcagaaagca gttcgtggcg ttccaagtga aattaatgac ctcaatgaac
    27781 cagtaaaaag cgtttcagag gctacgattg acctaggaaa agttgttgca gcggtgaaag
    27841 aatttgaaaa gtctggtcaa acgcttgatg atgatattaa agcgcagatc ttgaaaaatg
    27901 aaaaagaagc gacaacgatt ttggaagaaa caggtcggat tgaaattctt tcagaggatt
    27961 tactaactac tacagatgca acaacatctg ctaaggaaga cgtaaatcaa gaagtcatct
    28021 cagaaaatca agcagataat tttgctgatt tagatattaa gattgagccc cagtatgata
    28081 ttgaacaagt tgtttcggaa gtgacagctt atgtacaaga aattctggat gatatggatg
    28141 ttgaggcgcg tattgataca agtcataatc gccgtacaat caatattcaa gtggatacca
    28201 atgaaccagg tcgtgttatc ggttatcacg gaaaagtctt aaaggctttg caacttttgg
    28261 ctcagaactt cttatacaac cgttatgagc gtaatttcta tattacaatc aatgtgaatg
    28321 attatgtaga acaccgcgca gaggttcttc aaggctacgc acaaaaattg gcagaacgtg
    28381 ttttggcaga gcaggaagcc taccatacag atccgatgtc aagtagcgaa cgtaaaatta
    28441 tccaccgcat tatctctaaa atggatggtt tgacaagcta ttcagaaggt agcgagccga
    28501 accgctatgt cgttgtagat attgaaggaa atcatgat
//
LOCUS       DASFQD010000013        28250 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.013, whole genome shotgun sequence.
ACCESSION   DASFQD010000013 DASFQD010000000
VERSION     DASFQD010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 28250)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28250)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28250
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.013"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(220..813)
                     /locus_tag="U1021_000445"
     CDS             complement(220..813)
                     /locus_tag="U1021_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM4711029.1"
                     /translation="MMQIKWRDCLLICFGAILYALVLNMLIIPHEFGEGGITGVTLLL
                     FYTTGIETSLSSFVLNGILIVLAYRFLSKLTVFYTFLAVATMSLTMHYTTFLQIKWLP
                     LIPSALLAGLMTGLSMALVIYGNGSTAGSDIIALLCNKYFKWKISTVILIFDVFVVTP
                     LAFKIGLVKTFWTLVMVVIISKSLDWFLQALKKNNHK"
     gene            complement(891..1274)
                     /locus_tag="U1021_000446"
     CDS             complement(891..1274)
                     /locus_tag="U1021_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEM4711030.1"
                     /translation="MGLFSGLLGNASQMDNDKIEQELEHVLLDNEQVEMAFSLVRDLI
                     VFTEYRLILVDKQGMTGKKVSYKSIPYRSISRFTVETSGHFDLDAELKIWISSAVEPA
                     EILQFKSDKSVIAIQKALASAVLGK"
     gene            complement(1362..3938)
                     /locus_tag="U1021_000447"
     CDS             complement(1362..3938)
                     /locus_tag="U1021_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pneumococcal-type histidine triad protein"
                     /protein_id="HEM4711031.1"
                     /translation="MKKKTTLFALTGIILSCHLFLAGCQKTENTAINHQDVQSSNISK
                     VDENTIVVSEIKSNGYMRLYGEESYFFEGPIPYAAHFLKDTLPDSDYKLNKEDIQYQL
                     EKGYIIKVNEQYFYYPKDKDANVISISEAKKLTKNQKKPTSQAKKGVAGVDYPTDDGF
                     LFENEGQILSKTDEGLVLEHNGHSHFIFYKDLKESKWSYLVPKEYIENSQSSSHSNAK
                     QAKLSQTFDDGYVFDPKDIVAEDANGYTVRHGDHYHYIWKSSLQYGQGNTGETIGKKG
                     QITVLDNHSLHTPTTRNNFVPLKSTTEKGHTSTQSNSKKAFPGIDYPTSDGFLFDGSG
                     VQGQTALGLLIGHGTHTHLLPYSHLIGSPWESYIPTQYLETARAEYHSSTSTQVDVEI
                     PLSPQEGGKPNSSVEEEREAKKSYLAENLHVSKEKIKVIETDAGPAFVYPHGDHSHTI
                     LIEKVEVGKPIEDPHGDPHAHDKIGMATLKQLGFDDEIIEDILHATADTPFPSNETDS
                     EKMREWLKTVKYLNIGQRKDPLKRAGLDLMPNVEVLGIGFTPIDDVKPILQFKKLKQL
                     WMTSTGVKDYQFLKEIPTLEGIDLSQNGVFDLGFLEEFPNLKVVSAAGNDIEDITILA
                     KLKALESLNLDHNKVTDLSPLADLSQLTAVSLDNNRITDLSAFQNKKKLTRLYISQNP
                     QLDISTLKTENLEELTANESNVKDLQFVKNNPNLTSLTLKNNKITELQGIEENEKLVN
                     LDVEGNQIKTLEIEGKQESVVRLNVADNQLKNLEGVNDYKALEDLNASKNDIETLAIT
                     EPNKTLKTIDVSENHIPKEELNLNDQKIPSAIAEHFPAVEGGSIENNQPKEVDKEAKE
                     SE"
     gene            4323..5075
                     /locus_tag="U1021_000448"
     CDS             4323..5075
                     /locus_tag="U1021_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711032.1"
                     /translation="MENTATQAFEELVAEQKKKRNRVLRIIITLFTAIIVFFACLTLF
                     KYNSGNISGTWRNSQAEQDIVKTSIKELQNQLPGIDKTWIDATYTMTVVDKKAVFTAT
                     TSFDIPKIAKLTLDQAYKVMLEEAQKEASSLGISVEEYLTTALGADYEKQLKSFLPTQ
                     AEAEKEFHKYQDEYAKELGATYNQETGTISATFFEGDVDQLFHTVTITKINDAAIKQL
                     TTYDISVKDIISYSRKGNTTIINGNEEFTLEK"
     gene            complement(5595..6125)
                     /locus_tag="U1021_000449"
     CDS             complement(5595..6125)
                     /locus_tag="U1021_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HEM4711033.1"
                     /translation="MKQNQLRQLTEISLFAALICVVVFFIRIPFGSQFVHLGNALVVV
                     GVLIFGAKKGALAASLGLGIFDLLSGYASVAWITILESLIVCFILHLFYEKFLKENDR
                     LTNIILVGIIAALTKIILNLLKYTLTGSLVGGLTPSASFLAALGRILGTYGTAITTII
                     AVPILYQVCKRLYKRK"
     gene            complement(6122..6970)
                     /locus_tag="U1021_000450"
     CDS             complement(6122..6970)
                     /locus_tag="U1021_000450"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine kinase"
                     /protein_id="HEM4711034.1"
                     /translation="MVQRLLLANDLPGVGKVALATSIPIAATCQVETILLPTVLLSSH
                     TGGFPDVVVEDMTDLNRAYFEQWKNLNLELAGILSGYCRNPQQLSQLAMYAKQTETPL
                     IVDPVMGDGGKLYTGFTSTYVDAMKELIQSAKLILPNVTEAAFLTGRDYLGACYDRVA
                     IEDLLEALAEQVSADIVLTGISFDDSQIGVAYFQQETGEITTYMSKKYPANFFGTGDI
                     LSTLLAVATIQQINLHQAIPLALDFIDKSLERTLALDRDLKFGISFEPFLAELQQAFQ
                     TLKEKL"
     gene            complement(7166..7855)
                     /locus_tag="U1021_000451"
     CDS             complement(7166..7855)
                     /locus_tag="U1021_000451"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HEM4711035.1"
                     /translation="MKFGIIAAMPQELKILVEHLQDATEIDVLGRTYYQGRIGQHEVV
                     LVQSGIGKVMSAMSVAVLADRFSVDVIVNTGSAGAVAEGIAIGDVVVANQLAYHDVDV
                     TAFGYAYGQMAGQELYYPADQVLLEQLRTVLAEQEMISHVGLIVTGDSFIAGQERIAT
                     IKTHFPEVLAVEMEGAAIAQAAVNTGKPFLVIRAMSDTAQGDANITFDEFIIQAGERS
                     AQTLIAFLEKN"
     gene            complement(7864..8184)
                     /locus_tag="U1021_000452"
     CDS             complement(7864..8184)
                     /locus_tag="U1021_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711036.1"
                     /translation="MGKPLLTDEILEKAKKKQYSDQSSQFGHYRPNQDISMDDALFDP
                     YLEEDYQGYEEGQTIRIPVKPTVVKSRRIETIKREAFRSKVNKILFWVIILLIMFIIA
                     VLFI"
     gene            complement(8195..8740)
                     /locus_tag="U1021_000453"
     CDS             complement(8195..8740)
                     /locus_tag="U1021_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM4711037.1"
                     /translation="MNFEEKTIERTEIFKGHIFDVVVDDVQLSDGTMSKRELIFHRGA
                     VCILAVTPEGKMILVKQYRKAIERAIYEIPAGKLELGEEDTLEDAALRELEEETGYTS
                     DKLTLLADFYSAIGFCNERIRLYLADNLIKVENPRPMDEDEVIELHEVTLEEALNLLA
                     TGDICDAKTIMAIQYLQLMRK"
     gene            complement(8749..10131)
                     /gene="glmU"
                     /locus_tag="U1021_000454"
     CDS             complement(8749..10131)
                     /gene="glmU"
                     /locus_tag="U1021_000454"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEM4711038.1"
                     /translation="MSNNYAIILAAGKGTRMKSDLPKVLHKVAGITMLEHVKRAVDAM
                     EPAKTVTIVGHKAELVQAVLEGQSEFALQSEQLGTGHAVMMAEPALAGLEGQTLVIAG
                     DTPLITGESLKNLINFHVSHKNVATILTAQADNPFGYGRIIRNADGEVQKIVEQKDAN
                     DFEKQVKEINTGTYLFDNKRLFEALKDINTDNAQGEYYLTDVISIFRQAGEKVGAYVL
                     RDFDESLGVNDRVALATAEAVMRKRINEKHMVNGVTFINPDATYIDIDVEIGAEAVIE
                     ANVVLKGQTVIGERTVLTNGTRVRDAKIAADVVISNSDIEESVIEEGVTVGPYAHIRP
                     GSLLKKDVHVGNFVEIKASTLGQGTKSGHLTYLGNATIGNNVNVGAGTITVNYDGKNK
                     FKTTVGDNAFVGSNSTIIAPVTIGDNALLAAGSVITKDIPVDAIGIGRGRQENKEGYA
                     TRFPFHPSQK"
     gene            complement(10307..10777)
                     /locus_tag="U1021_000455"
     CDS             complement(10307..10777)
                     /locus_tag="U1021_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HEM4711039.1"
                     /translation="MTPTQLWQEFLAINSQAGPEPEAWAFGAEADRLADLVARGIKTS
                     TSSAHALYAVEGEEIPRAGGYDIILDGQGQAVCIIQTTKVYVTPFSQVTEEHAYKEGE
                     FRQGGDLSDIKAKSLIHWRQVHEELFTIWLAEAGLSFSEDMLVVCEEFELVYPK"
     gene            complement(10774..11055)
                     /locus_tag="U1021_000456"
     CDS             complement(10774..11055)
                     /locus_tag="U1021_000456"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711040.1"
                     /translation="MLIFDDNPHVAVVICKHISEENKPITYISHDLEDGMWQFLCGDI
                     HDIADVQLIALVEILQFGITETLLNQIPYGFEALLDQAKNWQISRKEKP"
     gene            complement(11067..11765)
                     /locus_tag="U1021_000457"
     CDS             complement(11067..11765)
                     /locus_tag="U1021_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006151199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase"
                     /protein_id="HEM4711041.1"
                     /translation="MTKTVLITGVSSGIGLAQAGIFLENGWRVFGIDQASKPDLAGDF
                     HFLQLDLTGDLTPVFSWCQSVDVLCNTAGILDDYRPHLDIEEDELARIFAVNFFAVTR
                     LTRPYLQQMVDRQSGIIINMCSIASSLAGGGGSAYTASKHALAGFTKQLALDYAKNKV
                     QVFGIAPGAVQTGMTQKDFEPGGLANWVADQTPIGRWSQPSEIAELTFMLATGKLASM
                     QGQIITIDGGWSLK"
     gene            complement(11758..11994)
                     /locus_tag="U1021_000458"
     CDS             complement(11758..11994)
                     /locus_tag="U1021_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018367459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2829 domain-containing protein"
                     /protein_id="HEM4711042.1"
                     /translation="MTFEEILPGLKAKKKYVRTGWGGAENYVQLFDTIEVHGQKLEAT
                     PYFLINVTGEGEGFSMWSPTPCDVLATDWVEVYD"
     gene            complement(12075..12878)
                     /locus_tag="U1021_000459"
     CDS             complement(12075..12878)
                     /locus_tag="U1021_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711043.1"
                     /translation="MNAISSLQRMLTKENKRYMRKLHAYLMLASAFHEQEERATELLL
                     SIYQDVLDAQADGQSAEDFLGKDSKQMADELLADLPPIRWYYGLRLTGLISLVYISWF
                     FLGLFGVTGEMVLEWRGLLCDLLLALILPSSAFFILKNLVYERSKIKFYLLMGMWGLS
                     FVGLVGLRFWISRQFYESLPLPLWASLLVILGVAAGLFYYRSKSAIVDTLIPAYVLTV
                     LSGFSQLLASQFGYGPQDWTGWLPLLFMVLAFFSTLAGTFFLLKKENMG"
     gene            complement(12900..13694)
                     /locus_tag="U1021_000460"
     CDS             complement(12900..13694)
                     /locus_tag="U1021_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711044.1"
                     /translation="MSKQMEYRKQIEVIESQLTRENKEYMGRINGYMMIASVFHRQEE
                     AVTAQLLSIYQDVLEAQKDGLSAEDFLGKDSKQMADDLLSYLPPIGFMEVANLSGLML
                     IIYLGSQWLMDFAGTGTISINWLGLVCDTALSFFLPAGIFLVIRGLIYQTSKIKVWAS
                     FLCIPLLFLLICGLRLWAIPKEPDLVLTGWGLLVPLTLLGLALLFFQKGKLVRYVFLP
                     TYLFMIVGGVVNMVMTVPVWLNLVLVILPAMAFWIGSAILLVRKEK"
     gene            complement(13696..14013)
                     /locus_tag="U1021_000461"
     CDS             complement(13696..14013)
                     /locus_tag="U1021_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEM4711045.1"
                     /translation="MKETQMLKGVLDGCVLQIISQKEIYGYELVQELRNQGFENMVGG
                     TVYPLLQKLEKNSLIFSQNKPSPDGPDRKYFYLTDQGKAYLEDFWSQWTELVQKVQRL
                     KGE"
     gene            complement(14010..14174)
                     /locus_tag="U1021_000462"
     CDS             complement(14010..14174)
                     /locus_tag="U1021_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711046.1"
                     /translation="MKLDKKSRENWKLAGITLVTAIITGWALDSILILGILLASGLLF
                     CFFVEEEEDL"
     gene            complement(14542..16554)
                     /locus_tag="U1021_000463"
     CDS             complement(14542..16554)
                     /locus_tag="U1021_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEM4711047.1"
                     /translation="MFGLTVRLALTNLKKNRRLYFPYALMTILSTAIAYIFASLAFHP
                     DLGQVKGANGVIQVLGFGMIVVMLAVAIMVFYANSFVMKQRSKEFGVYSILGLEKKHL
                     FLMTFLENLVFSVGTILAGLLLGLALDKLFYALLLKAMQMPVVLASTFQLKSLVTVLI
                     YLFGIFALVSLFNIGKLGLTDSLKLVQGKKRGDKKSGLLWLQTLLALILLGTGYAIAQ
                     LVTSPMQAIPSFFGATLLVIFGTYLLFHAGVISLLNWLKQRQTYYYKPENFISVSNLI
                     FRMRKNALGLATITILSSMFLVTMVGGLNIYIGGKDYIANQNPNDYSIDVGMQPTTSK
                     AQTEKWEEWAEAILEETDIPVESKVVYPYQQAYFSEVTNQQVRFLTDEEAAGMNFSDR
                     VGIGFVFDQASYEKMTGEKLQLASDQVAIFSKGVQYQAGQTLTFDEKEMEVVQVLPKN
                     VTLGHLPDHGSFLLSQYLVIVVQDLTVFEKQTRSRYYMGFESSLSEEEQVNSQEVFLS
                     GTFESELWESNILPNGTNAISLAYRAYAMRSFFSFAGSLFFIGLLLSLIFLMAVVLVI
                     YFKQISEGYEDRDRFVIMTKVGLDEDQTRQSIRKQLLTVFFLPILLAFVHLAFAYKML
                     SSILLSIGVVNAGLMLQVTAGICGGYLLLYLVVYAITTRSYKQIIS"
     gene            complement(16556..17314)
                     /locus_tag="U1021_000464"
     CDS             complement(16556..17314)
                     /locus_tag="U1021_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000173375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711048.1"
                     /translation="MSVLDVQHVQKIYSSLFKAGQVEALKDIHFTVEKGEYVAIMGES
                     GSGKSTLLNILATLDKPTQGKVLLNGLDTQSIKSKEAAAFRREKLGFVFQDFNLLDTL
                     SVKDNVLLPLVLSRYPIDEMNKRLVHTLNSLGIATLQDKMPYEISGGQQQRVAVARAI
                     ITQPEILLADEPTGALDSKSTATLLDIFEKINQEGQTILMVTHSTVAASRAKRVLFIK
                     DGILYNQIYRGERTSQEMYQLISDTLTLMANRGE"
     gene            complement(17410..18402)
                     /locus_tag="U1021_000465"
     CDS             complement(17410..18402)
                     /locus_tag="U1021_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM4711049.1"
                     /translation="MNKDDFGSLVPGFLTSWLGHRLIFLIAYAVFAVAILAYSSLFDI
                     QRNLVFYALTLLTICWLLALLWDFFREFSRFGKIWRGQKVAIGTASERLLQEKVERLE
                     VQNKQILEKQRQEQTELDDYYTLWAHQMKTSIAASQLLVKEVDSSPVRHQLETELFKI
                     EQYTGLVLNYLRLQSFHDDLVIESVNLDELIRNLVRKYSLFFIQANTSLDLGQLDRTV
                     KTDKRWLGLLIEQILSNALKYCQGGSVSIFLDGDELVIRDTGIGIAESDLERVFERGF
                     SGFNGRRTQQSSGLGLYLSRKIAAELGYSLKLKSKVGQGTEVRIGIKEVELIFD"
     gene            complement(18395..19078)
                     /locus_tag="U1021_000466"
     CDS             complement(18395..19078)
                     /locus_tag="U1021_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4711050.1"
                     /translation="MQKILLIEDDKTIRQLVAKNLINWGYQVQEVKDFQTVLEQMEEF
                     QPHLILLDIGLPFFNGYYWCQEIRKTSRVPIMFLSSHDQPMDIVMAINMGADDYVTKP
                     FEMTVLLAKIQGLLRRTYDFVGEQSLLWFEEISLDLKTMQVSYGQVVEELTRNEFQIL
                     RVLFEHGKEVVGREELMRELWNSDIFVDDNTLSVNIARLRKKLAELDLPDVIATKKGV
                     GYGLVWTHE"
     gene            19247..20428
                     /locus_tag="U1021_000467"
     CDS             19247..20428
                     /locus_tag="U1021_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2974 domain-containing protein"
                     /protein_id="HEM4711051.1"
                     /translation="MPNLLTYIEETQYDNFYDKPINKLDILALTELSYLPFDNLVPYS
                     FTENGVRLDWLAATFEETYKNNFPPFSMVTKNRLALLGLLAKSKRFKSIKAFGFIDDY
                     QLEQEKQFSAISYRIDRKTIVTCFRGTDDTIIGWKEDFHMTYMDEIPAQRAASGYLEK
                     LMMQQGGHFYLAGHSKGGNLALYAACQQATDQQDRILAIYPFDSPGLHKKHLEAPSYQ
                     AIHQRIFPVIPQNSIVGMMLETPENAQIVQSNTLSILQHISFSWEVDGSDFKLAPALT
                     SDSLQTDQALKTWTASLTDDELRDFFDLFFGIFIKAGIERFSDITVNPLQKLQEIDRL
                     RKEIAPEEAEMVDKLIRLLFDTRYQIWRDNISTSIPSPEISLPDWRKLFQRNTTENKE
                     N"
     gene            complement(20443..21567)
                     /locus_tag="U1021_000468"
     CDS             complement(20443..21567)
                     /locus_tag="U1021_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HEM4711052.1"
                     /translation="MKLPRFGVEEWLNVHENSAIYDIAGVSISSLTLEELFALSGTNP
                     EDFYKKLQGTKLNYGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYGLIE
                     PGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEEHGWLPDLEKLRQLIRPNTKMICIN
                     NANNPTGAVMDRAYLEELAEIASEVGAYILSDEVYRSFSGLDVPSIIEVYDKGIAVNS
                     LSKTYSLPGIRVGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERN
                     RRILEENLAILDQWIEGEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEYGVLLV
                     PGNRFERDGYVRLGFACEQETLIKGLEKLSQFLRRFDKEN"
     gene            complement(21731..22492)
                     /locus_tag="U1021_000469"
     CDS             complement(21731..22492)
                     /locus_tag="U1021_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEM4711053.1"
                     /translation="MSHQLENAKNLYLRGIRDGEIKEVHEHYMGATYTQHSTGVPDEK
                     EGFATFFEDFFKRNPKREITIVRAIEDGNFVFVHVHQKLNDGEAEWVTADIFRSDENG
                     RIVEHWDVIDAYPKTIGQTDPIYADFELTDLDKTEDNKKIVRRFLVDVLQNGEIEKFD
                     NYVAADLIQHNQEIAQGGAAYKDYLVDKAVDYDFVFKVIGQGDYVVAYSKVWIAGQDY
                     AHFDIYRLKDGKIVEHWDNKEVMPEKKDLTNLGKF"
     gene            complement(22504..24015)
                     /locus_tag="U1021_000470"
     CDS             complement(22504..24015)
                     /locus_tag="U1021_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease/substrate-binding
                     protein"
                     /protein_id="HEM4711054.1"
                     /translation="MNLFETFIERKDEWGIALFEHLRISLLALIIAIAIAVPLGLILS
                     SKKRLTEWSLQITGIFQTIPSLALLGLFIPFMGIGTLPAVVALVIYAIFPILQGTLTG
                     LGEIDPSLEEAATAFGMNKWEKLKKFKLALAMPILMSGIRTASIMIIGTATLAALVGA
                     GGLGSFILLGIDRNDSALILIGAVSSAILAVLFGYGIRLLQDKKPKTILLALLVTLFT
                     VGASYVPMLNFSTKQLVIAGKLGAEPEILINMYKLLIEDQTDIKVEIKPNFGKTSFLY
                     EALKSGSIDIYPEYTGTITSTLLKNSPMDLSTNPEEVYTYAKEAILEQDGLMYLAPMA
                     FQNTYALAVTEDYAQDHGIEKISDLAKVQQTAVAGFSLEFNDREDGNIGLKNLYNLQL
                     NVKTMEPALRYEAIKSGNVQIIEAYSTDSKVVTYKLKILEDDKQLFPPYQAAPLLSKE
                     TLEKYPELEQVLGVLAGKISTEEMTQMNYAVDVEGKSAEQVAREYLEQEGLLK"
     gene            complement(24015..24746)
                     /locus_tag="U1021_000471"
     CDS             complement(24015..24746)
                     /locus_tag="U1021_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711055.1"
                     /translation="MIDYQNVSLTCKVSGPILKNLTFDIQEGEFFVLIGPSGSGKTTT
                     LKLINRLIEQTEGEVFFQGKRLKDFDLRELRLETGYVLQQIALFPNMTVAENIALIPE
                     MKGLGKEETLTRTRELLTKVGLEPDSYLDRLPKDLSGGEKQRIGILRAIIANPKVLLM
                     DEPFSALDPISKAQLQDLIKELHEEFKMTTVFVTHDMDEAVKLADRICLMQDGQVVQL
                     GSPDELRNYPANDFVKEFIRARGGM"
     gene            complement(24739..25188)
                     /locus_tag="U1021_000472"
     CDS             complement(24739..25188)
                     /locus_tag="U1021_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM4711056.1"
                     /translation="MPEVRKRSKDYARMFDQQVGLYEGYARRHGLNAKCLSILMWIYY
                     NPGGVTQNWVSKKTYSSKQVVNATVKKFLDRELVVLEENPADKRHKKIKLTEEGQQFA
                     SRILDPLEEAENKALSQLSQEEQELMLGLIQRYSQSLMAILKGEDDD"
     gene            complement(25498..26034)
                     /locus_tag="U1021_000473"
     CDS             complement(25498..26034)
                     /locus_tag="U1021_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HEM4711057.1"
                     /translation="MVKKSSSVWTSLLLGAAGGAAAAAFLASKTGKTVKEKVVNFAND
                     YKENHEEINADFVTKAQDLGKQATERFTEVKTQLETGELTVEDLVKSGKEKSLETFEQ
                     IKEKIAEQNLSTADILEAIKAKTAKTPTVDLTEEDIEDAVVVSEDIEIDIEDVQTEVV
                     SETVSEVASETASETVEG"
     gene            complement(26018..26431)
                     /locus_tag="U1021_000474"
     CDS             complement(26018..26431)
                     /locus_tag="U1021_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF948 domain-containing protein"
                     /protein_id="HEM4711058.1"
                     /translation="MIIEISVLIIALSIAAVAVYIVLLLKKLGTVTDEAQQTLKVLTS
                     DVNVTLYQTNELLAKTNVLVEDVNGKVSTLDPLFVAVADLSTSVSDLNASARDLTVKA
                     KSAGASTVKAGGALSALSTLSSLLGKKGEKNGKKI"
     gene            complement(26442..27245)
                     /locus_tag="U1021_000475"
     CDS             complement(26442..27245)
                     /locus_tag="U1021_000475"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEM4711059.1"
                     /translation="MNTIEKRLNMNPIAVKLGPLEIRWYAICILLGLILGVYLATKEG
                     PRKKIRQDDILDFILIAFPLSIIGARIYYVAFSWSEYKDNILSIFAIWNGGIAIYGGL
                     ITGAIVLYFFTQYRFINTLDFLDIVAPSVMIAQAIGRWGNFFNQEAYGKAVESLNYLP
                     AFIRDQMYIDGAYRQPTFLFESLWNLLGFGLVCVLRRRPKFLKQGEITAFYLVWYGCG
                     RLLIEGLRTDSLMFLGIRVSQWLSGVLILVGINMVVLRRRKSSIPFYQP"
     gene            complement(27220..28152)
                     /locus_tag="U1021_000476"
     CDS             complement(27220..28152)
                     /locus_tag="U1021_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HEM4711060.1"
                     /translation="MTVYVKDLVDNLRIECAYSTEELLQKQITTADITRPGLEMTGYF
                     DYYAPERIQLIGMKEWSYLMAMTAHNRYQVLSQMFQPETPVVIVARGLEIPEEMYKAA
                     KEKQIAICRSKTATSRLSGELSSYLDSRLAQRTSVHGVLMDIYGMGVLIQGDSGIGKS
                     ETGLELVKRGHRLVADDRVDVYAKDDVTLWGEPAEILRHLLEIRGVGIIDIMSLYGAS
                     AVKDSSEVQLAVYLENFETGKVFDRLGNSGDTIEIAGIAIPQIRIPVKTGRNISVVIE
                     AAAMNYRAKQMGFDATKIFEERLSNLIEHNREEA"
BASE COUNT         8334 a         6517 c         5276 g         8123 t
ORIGIN      
        1 acactttcgg tttaccctac tctagtacca gctccttgtc tgaaagttat actcttcgaa
       61 aatcaaaatc agacgttgtt gacttgattt gacgaacttc agttctatct gcatctgcgt
      121 cgcctagtct gtttttgatt ttcattgagt attaattcat tcgactataa gaaaagagaa
      181 aactagttat acatgcacaa ctgggtttct cttgtatttt tatttatgat tattcttttt
      241 caatgcttgc aagaaccagt ccaaactttt actgataatg acaaccatta ccaatgtcca
      301 aaatgttttt acaagcccaa ttttaaaagc caaaggagtt accacaaata catcaaaaat
      361 gagaataacg gtggaaatct tccatttgaa atatttatta cacaacaatg caataatatc
      421 acttcctgct gtagacccgt ttccataaat gactagagcc attgataaac ctgtcatcaa
      481 tcccgccaag agagcagagg gaatcagggg caaccatttt atttgcagaa aagtcgtata
      541 atgcatggtt aaggacatag tagcaaccgc taagaaagta tagaaaaccg ttaacttact
      601 caaaaagcga taggctaata caatcaaaat cccattcaaa acaaaactgg acagacttgt
      661 ttcaatccct gtcgtataaa acaaaagtag ggtaacacca gtaatcccac cttcgccaaa
      721 ttcatgtgga atgatgagca tattcaaaac aagggcatat aggattgccc caaaacatat
      781 caataagcag tctctccatt ttatctgcat catattctct cctcacaaac agtccacctt
      841 agtatatcaa aaaaagcaga aagaggatag ccactttctg tacttttttc ctattttcct
      901 aagacagctg aagccagtgc tttttgaata gcaatgacac tcttatcgct cttaaactga
      961 agaatttcag caggttcaac agccgatgaa atccatattt tcagctcagc atctaggtca
     1021 aaatgaccag aggtttctac tgtaaagcgt gaaattgagc ggtaaggaat cgatttataa
     1081 gatacctttt tcccagtcat tccttgctta tcgaccaaaa tcaatcgata ttctgtaaaa
     1141 acaatcaaat cacgaaccag actaaatgcc atctcaacct gttcattatc cagtagaaca
     1201 tgctccaatt cctgttcaat cttatcatta tccatttgcg aggcattacc tagtaaacct
     1261 gaaaatagtc ccataatatg actcctttgg tatttttcta tagtataaca caaaaagcta
     1321 ctagttgact atcttaggta gctctttacc aaacacgaga attattcgct ttcctttgct
     1381 tccttatcaa cttctttagg ttgattgttc tcaatactgc caccttcaac tgctggaaaa
     1441 tgttctgcaa tcgcagatgg gatcttctga tcatttagat ttaattcttc cttcggaatg
     1501 tgattttcac tcacatcaat tgttttcaaa gtcttatttg gctctgtgat ggcaagtgtt
     1561 tcaatatcat tttttgaagc attcaggtct tctaaggctt tgtaatcatt gactccttct
     1621 aaattcttca attgattatc tgcaacattt aatcgaacaa ccgattcttg tttaccctct
     1681 atttccaaag tcttaatttg attcccctct acatccagat ttactaattt ttcattttct
     1741 tctatccctt gtaattcagt aatcttatta ttcttaagag taagactagt taaatttgga
     1801 ttgtttttta caaactgaag atcttttaca ttactttcat tagctgtcag ttcttctaaa
     1861 ttctctgttt ttagagttga tatatccaat tgaggattct gtgatatata caaacgggtt
     1921 aacttcttct tgttttgaaa cgcagataaa tctgtgatac gattattatc taaactaaca
     1981 gctgtcaatt gtgacaaatc tgctaatggg gataaatccg tcactttatt atgatctaaa
     2041 tttaaagatt ccaaagcttt taatttagct agaatagtga tatcttcaat gtcatttcct
     2101 gcagcagaaa ctacttttaa gtttggaaat tcttccaaaa agcccaaatc aaaaacacca
     2161 ttttgtgata agtcaattcc ctctaatgtt ggaatttctt tcaaaaactg ataatcctta
     2221 acgcctgtgc tagtcatcca taattgtttc aattttttaa attgcaagat aggttttaca
     2281 tcatcaattg gcgtaaaacc aatccctaac acttcaacat ttggcatcaa gtccagaccg
     2341 gctctcttta gcggatcttt tcgctgacca atatttagat attttaccgt ttttaaccac
     2401 tctctcatct tctcggaatc tgtttcatta gatgggaaag gagtatcggc cgtagcatgc
     2461 aaaatatctt caataatctc atcatcaaaa cctaattgtt ttaaagtagc cattccaatt
     2521 ttatcatgag catgtgggtc accgtgaggg tcttcgattg gttttccaac ttcaactttc
     2581 tcaatcaaga ttgtatgaga atggtcacca tgagggtaaa cgaaagcagg tcctgcatct
     2641 gtttctatca ccttgatttt ttcttttgaa acatgcaggt tttcggctaa gtagctcttt
     2701 ttagcttctc gttcttcttc tacacttgag ttaggtttcc caccttcttg tggtgacaac
     2761 ggaatttcta catcaacttg agtggaagtt gacgaatggt attctgctct agcagtctct
     2821 aaatactgag taggaatata agactcccac ggacttccta tcaaatgact gtacggaagt
     2881 aaatgagtat gagtaccatg gccaatgagt aaccctaacg ctgtttgacc ttggactccg
     2941 ctaccatcaa aaaggaaacc gtcgcttgtt ggataatcaa tacctgggaa agctttcttt
     3001 gaattagact gagtggaagt atgccctttt tctgtggtag acttgagtgg gacgaaatta
     3061 tttcttgtgg tcggagtatg caacgaatga ttatcaagaa cagtaatctg tccctttttt
     3121 ccaatggtct ccccagtatt tccttgtccg tattgcaaac ttgatttcca aatataatga
     3181 taatgatctc catgacgtac cgtatagcca ttcgcatctt cagccactat atccttcgga
     3241 tcaaatacat aaccatcatc aaaagtttgt gatagcttcg cttgctttgc gttggaatgc
     3301 gagctggatt ggctattctc aatgtactct ttgggtacca gataggacca tttgctttct
     3361 tttaaatcct tatagaagat aaaatgtgaa tgaccattat gttctaagac cagtccctca
     3421 tccgtttttg aaagaatttg accttcattt tcaaaaagaa atccatcatc cgtaggataa
     3481 tcaacaccag ctaccccttt tttagcttga gaagtaggtt tcttttgatt tttggtgagt
     3541 ttcttagctt cagaaataga aattacatta gcatctttat ccttgggata gtagaagtac
     3601 tgctcattta cttttataat ataacctttc tctagctgat actgaatatc ttctttattc
     3661 aatttataat cagaatctgg aagggtatct tttaaaaagt gtgccgcata cgggatcgga
     3721 ccttcaaaaa agtatgactc ttctccatat agacgcatat agccattaga tttaatttca
     3781 gacactacaa tcgtattttc atctactttt gagatattgc tactttgaac atcttgatga
     3841 tttattgcag tattctctgt tttttggcaa cccgccaaaa aaagatgaca agataggata
     3901 atgcctgtca aggcaaataa ggttgttttc tttttcattt ttgtcctcct aagctcatta
     3961 accagttaac aattaactag tatacatttt atttttgatt tttgcaagaa aaaacaactg
     4021 acaatgattg ttcgtgaata aattttccat tccacgacaa acgcatgaaa aacttgtttt
     4081 ataaaccata ttttcacgac tgctgtcagt ttttagtaga aaaatgtaat ataatagcct
     4141 tggaaatggg ggtatccttg ttaaagtgca agttttacaa aaacctttaa aaaaatgcat
     4201 acgacaaaaa aatagttaca tacctttttc ttcatgcgga ttgcatgttt ccatccctac
     4261 gaccattgac aaagcaaaca aactatagta tattaaaaat agggaaataa aaggagaata
     4321 ttatggaaaa cacagctact caagctttcg aagaactcgt tgcggaacag aaaaagaagc
     4381 gtaatcgcgt ccttagaatt attatcacac tctttaccgc tattatcgta ttttttgcct
     4441 gtcttacatt attcaaatat aatagtggca acattagcgg tacatggcgc aattcccaag
     4501 ctgaacaaga cattgtcaaa accagtatca aggagttaca aaatcaactt ccaggtatcg
     4561 ataaaacgtg gattgatgca acctatacga tgacagtcgt agataagaaa gctgtcttca
     4621 ccgctacaac aagctttgat attcctaaaa tcgcaaaatt aaccttggat caagcctata
     4681 aggtgatgtt agaggaagca caaaaagaag caagttctct gggaatttcc gtagaagaat
     4741 acttaacaac cgctctcgga gcagactatg aaaagcaatt gaaatcattt ctacctacac
     4801 aagctgaggc ggaaaaagaa tttcataagt accaagacga atatgctaaa gaactaggcg
     4861 ccacatacaa tcaagaaact ggtactatct ctgctacctt tttcgaagga gacgtcgatc
     4921 agctcttcca taccgtgacc attacaaaaa ttaatgacgc agcaatcaaa cagctgacta
     4981 catacgatat ttccgtaaaa gatattattt cctattctcg caagggaaat accaccatta
     5041 ttaacggaaa tgaagaattt actttagaaa aataataaaa aaagctggga aagtcatccc
     5101 tgatggttcc gacctcaccc acagaataat gaaaataaat atgaagccct cactaggtgt
     5161 ataatcttag tgagggcttt gtgcttgacg agttaatgat gttagtcatc gccggaaaaa
     5221 ctaacccact ctattggcga gctctaaaaa acatgcaata gacatgagta taagaactag
     5281 ccaataaaaa cacagataga ttcaagctga tttttgatga aatacagccg aattgtctgt
     5341 gcttttattt ttgtctctac tatagatagg acaacattgc ggcgatattt gaaagaactt
     5401 gtaccaatac tcaatgaaaa tcaaaagtag cctagaaaac gaagccgaag atagaactgg
     5461 agttatcaag gcaagttgac aacggataat tttgattttc gaagagcata acctcctgtt
     5521 tgtttcgtca cttacagtgt agtccttctg accttttttt gcatattgaa tttaactaat
     5581 gtcactaata taaattattt tctcttatat aaccttttac atacctgata aagaataggt
     5641 acagcaatga tggtcgtaat tgcagtgcca taggttccta aaatccgacc caaagcagct
     5701 aaaaatgatg ctgatggcgt tagtccaccg actaaactcc ccgtcaatgt gtacttcaac
     5761 aggttcaaga taatttttgt gagggctgca attatcccaa ccaaaataat attggttaag
     5821 cgatcatttt ccttgaggaa tttctcgtaa aacaaatgca aaatgaagca gacgatgagc
     5881 gattctagaa tggtaatcca agcaacggaa gcatatcccg acagtaaatc gaagatgcct
     5941 agaccgagtg aggctgccag cgctcctttt ttggcaccaa agatcaatac tcctactacc
     6001 accagagcat tgcctaaatg gacaaattga ctcccaaaag gaatacgaat aaagaagaca
     6061 accacacaaa taagggctgc aaataggcta atttctgtta attgacgcaa ttgattctgt
     6121 ttcataattt ctcctttaat gtttgaaatg cctgctgtaa ttctgctaga aaaggttcaa
     6181 aggaaatccc aaatttcaag tctctatcca aagcaagagt acgctctaaa ctcttatcga
     6241 taaaatctaa agctagaggg atagcttgat ggagattgat ttgttggatg gttgctacag
     6301 ccaacaaggt agatagaatg tcacctgttc caaagaaatt tgctggatat tttttagaca
     6361 tataggtagt tatttcccct gtttcctgct gaaaataggc tacacctatt tggctatcat
     6421 caaaggaaat ccctgtcagt acaatatctg cggatacctg ctctgctaaa gcttccagta
     6481 agtcctcaat agccactcta tcgtagcaag ctcccaaata atcccttcct gtcaaaaaag
     6541 ctgcctctgt tacattgggg agaatgagct tggccgactg gatcaactct ttcatggcat
     6601 ctacataggt agatgtgaaa cctgtataca acttccctcc atcccccatg accggatcaa
     6661 caatcaatgg tgtctctgtt tgtttcgcat acatagccaa ttgacttagt tgctgaggat
     6721 ttctacagta gccagacaag atgcctgcca actccaaatt caagttcttc cactgttcaa
     6781 aataggctcg attcaagtca gtcatatctt caacgacaac atctggaaaa ccacccgtat
     6841 gagaagaaag tagtaccgtt ggtaaaagaa tcgtttctac ctgacaggtt gctgcaattg
     6901 ggatgctagt ggctagggca accttgccca caccaggcaa atcatttgca agcaataatc
     6961 gctgaaccat aacaacctcc taaattattt ttcttaaaca aaattgtaaa gtattttcac
     7021 gagcttttca ataactctta tcagaaattg tatggggaca gatggctgaa accttataat
     7081 atcgggctca aattactgca taagaaaaca gtaacaactt cttgctactg tcatcctatt
     7141 tcgatgtatt gttgtcaaaa tctgcttaat ttttctccag aaaggcaatc agggtctggg
     7201 cagaacgttc tcctgcttga atgataaatt catcaaaggt gatattggca tctccttgag
     7261 ctgtgtcact catggcacgg ataaccaaga atggcttacc tgtattaaca gctgcttgag
     7321 cgatagctgc tccttccatc tctacggcaa ggacttctgg gaaatgagtt ttgattgtag
     7381 cgattctctc ctgacctgcg ataaaactgt cacctgtcac aatcagaccc acatgactaa
     7441 tcatttcctg ctctgctaaa acggttctta gctgttctaa caagacttgg tcggctggat
     7501 aatacaattc ctgccctgcc atttgcccgt aagcatagcc gaaagccgtc acatccacat
     7561 cgtggtaagc caattgattc gctacaacca catcaccgat ggcaatacct tcggcaacag
     7621 ctcctgccga acctgtattg acaatgacat caaccgaaaa acgatctgcc aaaacagcca
     7681 cggacatagc tgacataacc ttaccgatac ctgactgaac aagaacaact tcatgttgac
     7741 cgattcgtcc ctgatagtaa gttcgaccca agacatcgat ttcagttgca tcttgtagat
     7801 gttcgaccaa aatctttaat tcctgaggca tggctgcgat aattccaaat ttcatctctt
     7861 ctcctaaata aataatactg caatgataaa cattatcagt aagatgatga cccaaaaaag
     7921 gattttgttt accttactgc ggaaagcttc tcgcttgatg gtttcgatac ggcgactttt
     7981 tactacagta ggtttgaccg ggattcggat cgtttgtccc tcttcatatc cctgataatc
     8041 ttcttctaga tatggatcga atagagcatc atccattgat atatcctggt ttggacgata
     8101 gtgtccaaac tggctagatt ggtcggaata ctgtttcttt ttcgctttct ctaaaatttc
     8161 atccgtcaac aagggcttgc ccattgctag tttcctactt tctcatgagt tgtaaatatt
     8221 ggatagccat gatggtcttt gcatcacaaa tatcgccagt agccaacaag ttcaaagcct
     8281 cttccaaggt tacctcatgt aattcgataa cctcatcttc atccattgga cgaggatttt
     8341 caaccttgat aaggttatct gctaaataaa ggcgaattcg ttcattacaa aaaccgatgg
     8401 ctgaatagaa atctgctagt aatgtcagtt tgtcactggt ataacctgtc tcttcttcta
     8461 attcccgtaa ggcagcatct tctaacgtat cttcttctcc taattccaac tttcctgccg
     8521 gaatctcata aatggcgcgt tcaatcgctt tccgatactg tttgaccaaa atcatttttc
     8581 cctctggcgt aacagctaaa atacaaactg ctcccctatg aaatattaat tcacgcttgc
     8641 tcatcgtacc atctgagagt tggacatcat ccacaactac atcaaaaatg tgccctttaa
     8701 aaatttctgt ccgctcaatg gttttttctt caaaattcat atgattacct atttttgact
     8761 tggatggaac ggaaaacgag tcgcataacc ttctttgttt tcttgacgac cacgaccaat
     8821 accgatggca tccactggaa tgtcttttgt aataacagaa cctgcagcca acaaggcgtt
     8881 gtccccaata gttactggtg cgatgatggt tgagttagag ccaacaaaag cattatctcc
     8941 aacggttgtt ttaaatttat ttttaccgtc gtagttgaca gtgatggtgc cagcaccaac
     9001 gttaacatta ttgccaatcg ttgcatttcc taggtaggtc aaatgaccag acttcgttcc
     9061 ttgaccaagt gtagaggcct tgatttccac aaagtttcca acgtgaacat cttttttcaa
     9121 gagactgcct ggacgaatat gggcgtatgg tcctaccgtc acaccttctt caataacaga
     9181 ttcttcaatg tctgagttgc tgatgacgac atctgctgca attttcgcat cacgtacacg
     9241 agtaccattg gttaaaacag tacgttcacc aatcaccgtt tgccctttca agacaacatt
     9301 agcttcgata acagcttccg caccaatctc aacatcaata tcaatatagg tagcatctgg
     9361 gttgataaat gtcacaccat tgaccatgtg tttttcattg attcgtttgc gcataacagc
     9421 ttctgcagtc gcaagagcga cgcgatcatt gacacccaaa ctttcatcaa aatcacgcaa
     9481 gacataagca ccaaccttct cgcctgcctg acggaaaatc gaaataacat ctgtcagata
     9541 gtactcacct tgggcattgt ccgtattaat atctttaagc gcttcaaaaa gacgtttatt
     9601 atcaaacaag taggtccctg tattgatttc tttcacttgt ttttcaaaat cgttggcatc
     9661 tttttgctca acaatttttt gcacttcccc atcagcattg cgaataatcc gaccatatcc
     9721 gaatgggtta tcagcctgag ctgtcaagat agtcgcaaca ttcttgtggc tgacatggaa
     9781 gttaatgagg ttcttcaagc tttctcctgt aatcagcggt gtatcccctg cgataacaag
     9841 ggtctgacct tccaaacctg caagagctgg ctcagccatc ataacggcgt ggcctgtccc
     9901 caactgttca gattgaaggg caaactctga ctgaccttcg agaactgctt ggaccaattc
     9961 tgccttgtga ccgacaatgg ttactgtttt agcaggttcc atagcatcta cagcccgttt
    10021 gacatgctcc aacatggtaa ttcctgccac tttgtgtaag acctttggca agtcagactt
    10081 catgcgagtt cccttacccg ccgctaggat aattgcatag ttattgctca tagttttctc
    10141 tcttttcaat gatatactcc tattatagca aattttgatg tttttggaaa atagcagtat
    10201 tataggaaat tttcgtaaat aaaaagaaac tggaatgaag ccagtttctc aaaaatttct
    10261 agtattagaa aacaaactac aggttgattg catccaatag aattgtctat ttaggataaa
    10321 ccaattcaaa ttcttcacag acaaccagca tatcttctga gaaggacagg cctgcttctg
    10381 ccagccagat agtgaaaagc tcttcatgga cctgccgcca gtgaatcaga cttttcgctt
    10441 ttatgtcaga caagtcacct ccctgacgga actcgccctc cttataggca tgttcttccg
    10501 tcacttggga aaagggcgtc acatagacct tggtggtctg gataatgcac acagcctgac
    10561 cttgtccgtc cagaatgatg tcatagccac cagctcttgg aatttcttct ccttctactg
    10621 catagagggc atgggcagag ctggttgagg ttttgatgcc cctagccacc aaatcagcca
    10681 gtcgatcagc ttctgcccca aaggcccagg cttctggctc aggacctgct tgggaattga
    10741 tggcaagaaa ttcttgccag agttgtgttg gtgtcatggt ttttcctttc tagaaatttg
    10801 ccaattcttc gcttgatcaa gtaaagcctc aaatccataa gggatttgat ttagaagtgt
    10861 ttcggttatc ccaaactgga gtatctcaac taaagcaatt aattgaacat ctgcaatgtc
    10921 atgaatatct ccacaaagaa attgccacat cccatcttcc aagtcgtgac tgatgtaggt
    10981 tatcggttta ttctcttcac ttatgtgttt acagatcact actgctacat gaggattatc
    11041 atcaaagatc aacatcactt tcctccctac ttcaaactcc agccgccatc aatggtaata
    11101 atctggcctt gcatggaagc gagtttacca gtagccagca tgaaggtcag ctctgctatt
    11161 tcgctgggct gactccagcg tccgataggg gtctggtctg ccacccagtt cgccaggcca
    11221 ccaggctcaa agtccttctg ggtcatgcct gtctgaacgg cacctggggc aatgccgaag
    11281 acctggacct tgttcttggc atagtccagt gccaactgct tggtaaaacc tgccaaagcg
    11341 tgcttggagg cagtataggc tgagcctcct ccacctgcta gactggaggc aatggagcac
    11401 atattgataa ttatgccaga ctgtctgtcc accatttgtt gcagataggg acgggtcagt
    11461 ctagtcaccg caaaaaaatt gaccgcgaag atgcgagcta attcatcctc ctcgatatcc
    11521 agatggggac ggtaatcgtc tagaatgcct gcggtgttac agaggacatc gactgactgg
    11581 caccatgaaa agactggggt taaatcgcct gtcaggtcca gctgtagaaa gtggaaatcg
    11641 cctgccaaat caggcttgct ggcctgatca atcccgaaga cacgccagcc attttccaaa
    11701 aaaatccctg cctgtgccag tccgatgccg ctggaaacgc cggtgatgag gactgtctta
    11761 gtcatagact tctacccagt cggtcgcaag gacatcgcat ggggtcgggc tccacatgga
    11821 gaagccctcg ccctcgccgg tcacgttgat gaggaaataa ggcgtcgcct ccagcttctg
    11881 cccgtggacc tcgatggtgt caaagagctg gacgtagttc tccgccccgc cccagcctgt
    11941 gcgaacgtac tttttcttgg ccttcaagcc tggtaaaatt tcttcaaatg tcatttgaaa
    12001 ctcccttatt cttctatctt tcaatcatta taccaaaaaa tcagactact ctaaagagtt
    12061 gcctgattgt atttctaccc catattctcc tttttcaata ggaaaaatgt gcctgcaagc
    12121 gttgagaaaa aggcaagaac cataaagagc agaggcaacc agcctgtcca atcctgcggt
    12181 ccgtagccaa actgactggc cagcagctga ctaaagccgc tgagcaccgt tagcacatag
    12241 gctggaatca aggtatctac aattgctgac ttactgcgat agtagaagag accagctgcg
    12301 actcctagaa tcaccaaaag actggcccac aagggcaggg gaaggctctc ataaaactga
    12361 cgactaatcc aaaaacgcag tccaactagc cccacaaaac taagccccca catccccatc
    12421 agcaaataga acttgatttt tgaccgttca tagactaggt tttttaggat gaaaaatgca
    12481 gagctgggca gaataagggc aaggagcaaa tcgcacagca agccccgcca ttctaggacc
    12541 atctcaccag tcactccaaa caaacctaag aaaaaccagc taatatagac caaggagatc
    12601 aatcctgtta accgcaaacc atagtaccag cgaatgggcg gtaggtcagc caagagttca
    12661 tccgccatct gcttactgtc tttgcctaaa aaatcctctg ctgactgacc atctgcttgg
    12721 gcatccaaga catcttggta tatagaaagc aagagttcag tcgccctttc ctcctgctca
    12781 tggaaggctg atgccaacat caagtaagca tggagcttgc gcatatagcg cttgttttcc
    12841 ttggtcaaca tcctctgtaa gctgctaata gcattcattt tttctgttgc ttgttcatct
    12901 tacttctcct ttctcaccaa caaaatcgca cttccaatcc aaaaggccat agctggcaga
    12961 atgaccaaaa ccagattgag ccaaactgga acggtcatga ccatattcac cacaccgcca
    13021 acaatcataa agagataggt cggtaaaaag acatagcgga ccaactttcc cttttggaaa
    13081 aatagcagag cgagaccgag caaggtgagt ggtactagaa gcccccatcc agtcaagact
    13141 aggtcaggtt ccttggggat tgcccagaga cgaagtccgc aaatcaggag aaaaagaagg
    13201 gggatgcaga gaaagcttgc ccagaccttg attttgctgg tctggtaaat cagaccgcga
    13261 ataacgagga aaatccctgc agggaggaag aaactgagag ccgtgtcaca caccaaaccc
    13321 agccagttta tggaaatggt gcctgtccct gcaaaatcca tcagccattg gctgccgagg
    13381 tagatgatca gcatgaggcc actcaggttt gcgacttcca tgaaaccaat cggagggagg
    13441 tagctgagta ggtcgtccgc catctgcttg ctatctttgc ccagaaaatc ctccgcagaa
    13501 agcccatctt tttgagcttc aagaacatct tggtaaatgg ataagagctg ggcagtcact
    13561 gcctcttcct gcctgtgaaa aacagaggca atcatcatat aaccattgat acggcccatg
    13621 tattccttgt tttccctggt cagctgagat tcaatcactt caatctgctt gcggtattcc
    13681 atttgtttgc tcatcttatt ctcctttcaa tcgctgaacc ttttggacca attccgtcca
    13741 ctgactccaa aaatcttcta gataagcctt tccctgatct gtcaaataaa aatacttcct
    13801 gtctggtccg tctggcgagg gcttgttctg actaaaaatc aggctatttt tctctaactt
    13861 ctgaaggagg ggatagactg tccctccgac catgttttca aagccctgat ttctcaactc
    13921 ctgaaccaat tcataaccat aaatctcctt ctggctgata atttgtaata cacagccatc
    13981 taggaccccc ttgagcatct gggtttcttt cataagtcct cctcttcctc tacaaaaaag
    14041 caaaacagta ggcctgatgc caacaggatg cctaagatca atattgaatc caaggcccag
    14101 cctgttataa tcgctgtcac aagcgtgatg cctgctagtt tccaattttc gcgacttttc
    14161 ttatccagtt tcatactgcc tccccatcta gtttgtaata ccaactagtc taataaaaat
    14221 aaaagtgatt ttctttgtct tctatcacta gtttgtttta cctattagat ttgtatctat
    14281 agtctaacac aaggtagcta gtttgtaaaa caaaatagtg gaaaatgagt aaaaaaatca
    14341 acactactac tcaaagttag tgtcaacatc tcagcacagt gatagattgc ttcaacagtc
    14401 tggggagaga ctgttgaagg tgggaaataa aacaaacgca gtttgtgtcc aaacaatctg
    14461 ggaaattgtt ggaagttgga aataaaaagt tacggtagca acatatctaa aaacgtataa
    14521 aaaacttggg ttgccccaag tttaggaaat aatttgtttg taagaccgtg tcgtgatggc
    14581 atagaccact aggtagagga ggagatagcc accacagatg cctgcagtca cctgcaacat
    14641 aagccctgca ttgaccacac caatagacaa caagatagac gagagcatct tgtaggcaaa
    14701 tgcaagatgg acaaaggcaa gtaggatagg caggaaaaag acggtcagca attgcttgcg
    14761 aatggactgt ctcgtctgat cctcatccag accaaccttg gtcataatga cgaagcgatc
    14821 tctgtcttca tagccttctg aaatctgttt gaagtaaatc accagcacca ccgccatcaa
    14881 aaagatgagt gatagcaaga gaccgatgaa gaaaagtgaa cctgcaaaac tgaagaaact
    14941 acgcatcgca taggcacggt aggcgagact gatggcgttc gttccattcg gtaatatatt
    15001 ggactcccaa agctcacttt caaaggtacc ggataagaag acctcctggc tatttacctg
    15061 ctcttcttcc gacagactgc tttcaaagcc catataatag cgactcctag tttgcttttc
    15121 aaaaacagtt aagtcctgca ccacaatgac caagtactga cttagaagga aggaaccatg
    15181 gtctggtaga tgtcctaaag tcacattctt gggcaagact tggacaactt ccatttcctt
    15241 ttcatcaaag gtgagggttt gaccagcttg atactggact cctttgctaa aaattgccac
    15301 ttggtcagat gccaactgga gtttttctcc cgtcatcttt tcatagctgg cttgatcaaa
    15361 gacaaaaccg atcccaactc ggtcagagaa attcatacca gcggcttctt catccgtcaa
    15421 aaatcttact tgctgatttg tcacctcaga aaaataggct tgctgataag gatagactac
    15481 cttactttca acaggaatat ctgtctcttc taagatagct tccgcccact cctcccactt
    15541 ctccgtttga gcttttgaag tggttggttg cattccaaca tcaatagaat aatcatttgg
    15601 attttgattg gcaatataat ctttgccacc gatgtaaata ttgagtcctc caaccatggt
    15661 caccaagaac atactggaga ggatggtaat ggtcgcaagc cctagagcat ttttccgcat
    15721 gcggaaaatc aagttggata cagaaataaa attctctggc ttgtagtaat aggtctgacg
    15781 ctgttttagc cagtttaaga gactgatgac acctgcgtgg aagagcaggt aggtcccaaa
    15841 gataaccaga agagttgctc caaagaaact tggaatagcc tgcatcggac tggtcactag
    15901 ttgagcaata gcatagcctg tgcccaataa gataagagct aagagggtct gtagccagag
    15961 taagcctgat ttcttatccc cacgcttctt accttgaacc agtttgagtg agtcggtcaa
    16021 gcccagtttt ccaatattaa agaggctgac caaggcaaaa atcccaaaga gatagataag
    16081 tacagtaacc agacttttca actggaaggt tgaagccagg accacaggca tctgcatggc
    16141 tttcagcaag agcgcataga agagtttatc tagagccagt cccaagagca agcctgctag
    16201 aatggtaccg actgaaaaga ccagattttc tagaaaagtc atcaagaaga gatgtttttt
    16261 ctccagacca agaatgctat aaacaccgaa ctcttttgac cgctgcttca tgacaaaact
    16321 attggcatag aagaccatga tggcaacggc cagcatgacc acaatcatac cgaaacccag
    16381 cacttgaatc actccattgg ctcccttgac ctgacctaaa tcaggatgaa aggcaagcga
    16441 ggcaaaaata taggcaatgg ctgtggacaa aatggtcatc agggcatagg gaaaatagag
    16501 tctgcggttc tttttgagat tggtcagagc caatcgaacg gttagtccaa acatactact
    16561 cacctcgatt cgccataagt gtcaaggtat ctgaaatcaa ctgatacatt tcctgactgg
    16621 ttctctcacc tcggtagatt tgattgtaga ggatgccatc cttgataaag agaacccgtt
    16681 tggcacgact agctgctact gtcgagtggg ttaccatcag aatcgtttgc ccttcttggt
    16741 tgattttttc aaaaatatcg agaagagttg ccgttgattt agagtcgagg gccccagtcg
    16801 gctcatccgc taagaggatt tctggctggg tgatgatggc acgcgccacc gcaactcgct
    16861 gctgctgacc acccgaaatc tcgtagggca tcttgtcttg caaggtcgca attcccaggc
    16921 tattaagcgt atgaacaagt cgcttgttca tctcatcaat cggatagcga gataaaacca
    16981 gaggcaaaag cacattgtcc ttgactgaga gggtatccaa gaggttaaag tcctgaaaga
    17041 caaagcccaa tttctcccga cgaaaggctg ccgcttcctt gctcttgata gactgggtat
    17101 ccaatccgtt aagcaagacc ttgccctgcg ttggcttatc aagggttgcc aaaatattga
    17161 gcaaggtgga ttttccagaa ccagactcac ccataatggc gacatattca cccttttcca
    17221 ctgtaaaatg aatatccttc aaagcctcaa cctgtcccgc tttaaagaga gaactgtata
    17281 tcttttgaac gtgttgaaca tctaaaactg acataacttg actccttttc tttttctacc
    17341 ttcattctac acggtcccaa gataaactac catagcctta gctttcattt acgtgacagt
    17401 tttgtaagat taatcaaaaa tcaactccac ttctttgata ccgattcgca cctctgttcc
    17461 ctgacctact tttgatttta gctttaggga atagcccagc tccgcagcaa ttttccgtga
    17521 gaggtagagc cccagacccg aagattgctg ggttctgcgg ccattgaaac ctgagaaacc
    17581 acgctcaaag acccgttcca agtcactctc agcaatccca attcccgtat cgcgaatgac
    17641 caactcatcc ccatctagaa aaatcgaaac gcttcccccc tgacaatact tgagggcatt
    17701 ggataaaatt tgctcaatca agagacccag ccagcgtttg tctgtcttta ctgtcctatc
    17761 caactgcccc aagtctaagc tggtattggc ctgaatgaaa aagagggaat actttcttac
    17821 tagatttctg atcagttcat ccaaattgac tgattcgata accaaatcat catgaaagga
    17881 ctgtaaacgg agatagttca agaccaagcc tgtgtattgt tcgattttaa agagttctgt
    17941 ttctagctga tgacggactg gactactatc tacttcctta accaagagct gactggctgc
    18001 aatagacgtt ttcatctggt gggcccagag ggtgtagtag tcgtctaatt ctgtctgttc
    18061 ctgtcgctgt ttttctagga tttgcttgtt ctggacttct agtcgctcca ctttttcctg
    18121 caacaaacgc tcactagctg tcccaatagc cactttctga ccacgccaga tttttccaaa
    18181 acgagaaaat tccctgaaaa aatcccagag gagggcgagg agccagcaga tagtgagcag
    18241 ggtgagggcg tagaaaacca agtttctttg gatgtcaaag aggctactat aagccagaat
    18301 agccacagca aaaacggcgt aggctatcag aaaaatcaag cgatgaccaa gccatgaggt
    18361 caaaaatcct ggtactaatg agccaaaatc atccttattc atgtgtccac accaggccgt
    18421 agcctactcc tttcttggtc gcaatcacat ctggcagatc cagttctgcc aatttcttac
    18481 gcaggcgagc gatattaacc gacaaagtat tgtcatccac aaaaatatca ctgttccaga
    18541 gttctctcat caactcctca cggccgacca cttccttgcc atgttcaaat aaaacgcgta
    18601 aaatctgaaa ttcatttcgc gtcagttctt ccacaacctg tccataagac acctgcatgg
    18661 tctttaggtc tagggaaatc tcctcaaacc agagtaaact ttgttctccg acaaagtcat
    18721 aggttcttct gagaagcccc tgtattttgg ccaggagaac cgtcatttca aagggcttgg
    18781 tcacatagtc atccgccccc atattgatcg ccataacaat atccattggc tggtcatggg
    18841 aagatagaaa cataatggga acacgggatg tcttgcgaat ttcctgacac cagtaatagc
    18901 cattgaaaaa cggcaggcca atatccagta aaatcaaatg gggctgaaac tcttccatct
    18961 gttccaacac cgtctgaaaa tccttgacct cttgcacctg gtaaccccag tttatcaagt
    19021 ttttagcaac tagttgccta atcgttttat catcctcgat aagaagaatt ttctgcataa
    19081 ctatctcctt tcatatcgct actattatta tagcttacat tggaacaaat ttgagtattt
    19141 ttatacattt acacaagaag tagactataa aaccaggtca tcagtggtgc agatttgtca
    19201 gaccaagcat atttcgttat actagataaa aaaggaaagg actgctatgc cgaatttatt
    19261 aacctatatt gaagaaactc aatacgataa tttttatgat aaacctatca ataagctaga
    19321 tattctggct ctgaccgaac tttcctacct cccttttgat aatctggtcc cctactcttt
    19381 tacagaaaat ggtgtacgac ttgattggtt ggcagcgacc tttgaagaga cctacaaaaa
    19441 taatttccct cccttttcta tggtgaccaa aaaccgccta gccttactag gacttctagc
    19501 caaatctaaa cgcttcaaat ctatcaaggc atttggcttc attgacgatt atcagttgga
    19561 acaggaaaag cagttttcag caattagtta tcgcattgac cgaaaaacga ttgtgacttg
    19621 cttcagaggg acagatgata ctattatcgg ttggaaggaa gatttccaca tgacctatat
    19681 ggatgaaatt cctgcccaac gtgcagcaag tggctactta gaaaaactta tgatgcagca
    19741 ggggggccat ttttatctgg ccggtcattc gaaaggcgga aatttagccc tctatgcagc
    19801 atgccagcaa gctacagacc aacaggatag aattctagct atctatccct ttgattcacc
    19861 tggcttacac aaaaaacact tggaagcacc tagttaccaa gctattcacc aacggatttt
    19921 ccctgtcatt ccccagaatt caatcgtcgg tatgatgtta gaaacaccag aaaatgctca
    19981 gattgtccag agtaataccc tcagcattct acaacacatc agtttttctt gggaggttga
    20041 cggaagcgac ttcaaactag cccctgccct gaccagcgat agcctacaaa cagaccaagc
    20101 cttaaaaact tggacggcta gtctaacaga cgatgaatta cgagacttct tcgatttgtt
    20161 tttcggcatc ttcatcaaag caggaattga acgttttagc gacatcacgg taaatcccct
    20221 acagaaatta caagaaattg accgactaag aaaagaaata gctccagaag aagccgaaat
    20281 ggtggacaaa ctcattcggc tcctctttga tacccgttat caaatctgga gggacaatat
    20341 tagcacttcc attccaagcc ctgaaatctc tctaccagat tggcggaaac ttttccaaag
    20401 aaatacaact gaaaataaag aaaactagct caaccacctg agctagtttt ctttatcaaa
    20461 tcttcttaaa aactgggata gtttttctaa tcctttgatt agagtttctt gttcacaggc
    20521 aaaacctaga cggacatagc cgtcacgttc aaaccgatta ccaggaacta ggagaacacc
    20581 gtattcttgc aagagttgca agcaaaaatc ttccataggc atatccactg caatttttac
    20641 aaagctggta gaaacaaccg ctggacggat ataggaaacg aggggttctc cctcaatcca
    20701 ttggtccaaa atagctaaat tttcttctaa aatgcgccga tttcgttcta gaatttcttg
    20761 ataatgggct aaagctaatt gagccaccag atcgtcaaag acacctgcac aaatcatggt
    20821 gtagtcccga taatctctca gaatgtccgt cacttgatga ttggctgcca cccaacccac
    20881 gcgaatacct ggcagagaat aggtcttgga taagctattt acagcaattc ctttatcata
    20941 gacttctata atagatggca catccagtcc agaaaaggaa cgatagactt catctgatag
    21001 gatgtaagca ccaacttcac tagcaatttc cgccaattct tccaaataag ccctatccat
    21061 gacagcacca gttggattat tggcattatt gatgcaaatc atcttggtat tgggacgaat
    21121 gagctgacgc agtttttcca agtctggcaa ccagccatgc tcttcctcaa tctgccacaa
    21181 atccacttct gctcccaaag actttggaat atcgtagagt tgttggtagg tcggataaag
    21241 ggaaatgaca tggtctcctg gctcaatcaa accataaaga actaacaagt ttgcccctgt
    21301 tgccccattg gtctggagaa tttgttctgg cttgacgcct gtatagagtt gactaactga
    21361 ttttttaaat gctggcgaac cttctatcca gccatagttg agcttggtgc cctgcaattt
    21421 cttataaaaa tcctcaggat tggtgcccga caaggcaaac aattcttcca aagtcaatga
    21481 agaaatggac acccctgcta tatcataaat cgcgctattt tcatggacat tcagccattc
    21541 ctcaacgcca aaacgtggta atttcataag acttcctact tttatttatc ctgctcttat
    21601 tgtaccatat tctttcaaca attgtataaa tatgcgatac atcataaaag gaatattttt
    21661 acaaaggaat atttttacaa ttgaaaaagc aggctttctc aaacgagact gcctgctctg
    21721 cttttttccc ttagaacttc cctagattcg tcaaatcttt tttctctggc atgacttcct
    21781 tgttgtccca gtgctcgaca atcttaccgt ctttgaggcg gtagatgtca aagtgggcgt
    21841 agtcctgacc tgcaatccag actttcgagt aagccaccac atagtcaccc tgtcctatca
    21901 ccttgaagac aaagtcgtag tcaacagcct tatcgaccag atagtcctta taagctgcac
    21961 cgccttgggc gatttcctgg ttgtgctgaa tcaggtccgc tgccacataa ttgtcaaact
    22021 tctcgatttc cccattttga aggacatcga ccaagaaacg acggacgatt ttcttgttgt
    22081 cctcagtctt atctaggtca gtcagctcaa agtctgcgta aatcgggtct gtttggccaa
    22141 tggtttttgg ataggcatca atgacatccc aatgctcgac gatacgacca ttttcatctg
    22201 aacggaaaat gtccgccgtc acccactcag cttcaccgtc attgagtttc tggtggacat
    22261 ggacgaagac aaagtttccg tcttcaatgg cacgaacaat ggtgatttct cgcttgggat
    22321 tgcgtttgaa aaagtcctca aagaaagtcg caaagccctc tttctcatca ggcacacccg
    22381 tactatgctg ggtgtaagta gcacccatgt agtgctcatg aacttccttg atttcgccat
    22441 cacgaatgcc acgaaggtac agatttttag cgttttctag ttgatgtgac atagtatttt
    22501 ctcctatttt aacaatcctt cttgttctaa atattccctc gccacttgct ctgccgactt
    22561 gccttccaca tcgaccgcat agttcatctg ggtcatttcc tcggtcgaga ttttgcctgc
    22621 caagacccct aggacttgct ccaactcggg atatttctct aaggtttctt tggacaatag
    22681 cggagcggcc tggtaaggtg ggaagagctg cttgtcgtct tctaggattt tcaatttgta
    22741 agtgactacc ttgctgtctg tagaatatgc ttcgataatc tgcacattac cactcttaat
    22801 agcttcgtag cgaagggcag gctccatggt cttgacattg agttggagat tgtagagatt
    22861 ttttagaccg atattaccat cttcgcggtc gttaaactct aatgagaagc ctgcgacagc
    22921 tgtctgctgc acttttgcca aatccgaaat cttttcaatg ccatgatctt gagcatagtc
    22981 ttctgtcaca gccaaagcat aggtattctg gaaagccatt ggtgctaaat acatcagacc
    23041 atcctgttcc aaaatcgctt ctttagcgta ggtataaacc tcctcaggat tcgttgataa
    23101 atccattggt gaatttttca aaagagtact tgtgatggtc cctgtgtact caggataaat
    23161 atcaatagaa cctgatttga gtgcctcata aaggaagcta gtctttccga aattaggttt
    23221 tatctccacc ttgatgtctg tctggtcctc aatcagcaac ttatacatat tgatgagaat
    23281 ttcaggttct gcaccgagct tccctgcaat gaccaactgt tttgtggaaa agttaagcat
    23341 gggaacataa ctagctccaa cagtaaataa agtcaccaat agagctaata aaattgtctt
    23401 gggtttcttg tcctgcaaca gacgaatgcc ataaccaaaa agtactgcaa ggatagccga
    23461 cgataccgca ccaatcaaaa tcagggctga atcattgcgg tcaattccaa gtagaataaa
    23521 ggatcctagg cccccagctc ccaccaaggc tgccagagtc gccgttccga taatcataat
    23581 ggaagccgtc cgaatccctg acatcaaaat aggcatggca agggctaact taaatttttt
    23641 caacttctcc catttattca taccaaaagc ggttgctgct tcttccagag aagggtcgat
    23701 ttctccaagt cctgtcaatg tcccctgcaa gataggaaag atagcataaa taacaagtgc
    23761 tactactgct ggcaaggttc cgattcccat aaaaggaatg aaaagaccaa gcaaagcaag
    23821 ggatggaata gtttggaaga tacctgttat ttgcagactc cactcggtca agcgtttttt
    23881 actagataga atcagtccca aaggtactgc aattgcaatc gcaataatca aagctagaag
    23941 ggagatgcga aggtgttcaa aaagagcgat tccccactcg tccttgcgtt ctataaaggt
    24001 ttcaaatagg ttcattacat acctcctcga gctctgataa attccttgac aaaatcattg
    24061 gcaggataat tcctcaattc atcaggactt cctaattgca caacttgtcc atcttgcatg
    24121 agacagatgc gatccgccaa tttaaccgcc tcatccatat catgggtaac gaaaaccgtt
    24181 gtcatcttga attcctcatg taactcctta atcaagtcct gcaactgagc cttactgatt
    24241 gggtccagag ctgagaaagg ttcgtccatg agtaacactt tcggattggc aatgatggcc
    24301 cgcaaaatcc cgattcgctg tttttctcct ccagacaagt ccttgggcaa acgatccaga
    24361 tagctgtctg gttccaagcc aaccttggtc aagagctctc tcgtcctcgt caaggtttct
    24421 tccttaccca gacctttcat ttcaggaata agagcaatgt tttcagctac cgtcatattt
    24481 ggaaaaaggg ctatctgctg aagaacataa cctgtctcca aacgtaattc acgcaggtcg
    24541 aaatccttaa gtcgcttacc ttgaaaaaaa acctctccct cggtctgctc aattagacgg
    24601 ttaatcaatt tcaacgtagt tgtctttccg ctaccactcg gtccaatcaa gacaaagaac
    24661 tccccttctt gaatatcaaa ggtcaaattt ttcaagattg gtccgctaac cttacaggtc
    24721 agagatacat tttgataatc aatcatcatc ttctcctttt aaaatagcca tgagactctg
    24781 actgtagcgc tgaattaatc ctagcataag ctcctgttcc tcctgactga gttgagacag
    24841 cgccttattt tccgcctcct ctaagggatc caaaatgcga ctagcaaatt gttgcccctc
    24901 ctctgtcaat ttaattttct tatgtcgctt atctgctgga ttctcctcta aaactaccag
    24961 ttctctatcc aaaaatttct ttacagtagc attgacaact tgtttgcttg aataggtctt
    25021 cttactgacc cagttttgcg tcacacctcc gggattataa taaatccaca tgagaatgga
    25081 taaacatttt gcattgagcc catgccggcg agcgtagccc tcatagagcc cgacttgctg
    25141 gtcaaacata cgagcgtaat ccttacttct tttcctaact tctggcatcg ttcccctccc
    25201 tattaagcac aatcaccttg ccaaaagcct ctggtctact agtgttcaaa acaacaacaa
    25261 ttttcacaac gacttcctcc tgtaatcatg ttagtcaata ttttttacta ttttaccaaa
    25321 aaaagaaaaa tagtcaatca ttttgactat tttgaaacat caactacctt attatagatt
    25381 cccgtcttca tccactcaaa catattaaat ccctgaaatt atctgctttt aatttacaca
    25441 aaacaaatga taatcagaca acaaaactag cctagaaaat tctaagctag tttcatttta
    25501 tccttcaact gtttctgagg cagtttcgct tgctacttct gaaacagttt ctgataccac
    25561 ttcagtttga acatcttcga tatcaatttc aatatcttca gacacaacta cagcatcctc
    25621 aatatcttct tctgtcaaat ccactgtcgg agttttagca gtttttgcct tgatagcttc
    25681 caaaatgtca gccgttgaca agttttgttc cgcaattttt tccttgattt gctcaaaggt
    25741 ttccaaggat ttttccttac cagacttgac caaatcttct actgtcaatt caccagtttc
    25801 aagttgagtt tttacttcgg taaatcgttc agtcgcttgt ttgcctaaat cttgtgcctt
    25861 agtgacaaaa tcagcattga tttcttcatg gttttcttta tagtcattag caaagtttac
    25921 aactttttct ttgactgttt taccagtctt acttgctaga aaagcagctg cagcagctcc
    25981 gcctgctgcc cctaacaaaa ggctagtcca cacgctacta gattttttta ccattttttt
    26041 ctcctttctt acctaagaga gatgagagag ttgacagagc tgaaagagct ccgccagctt
    26101 ttacagtact tgctccagca gacttggctt tgactgtcaa atcacgcgct gaagcattca
    26161 aatcagatac agaagttgac aagtcagcta ctgctacaaa aagaggatca agggttgaaa
    26221 ccttgccatt tacatcttcg actaaaacat tggttttagc caaaagctcg ttggtctgat
    26281 agagagtcac attgacatcg ctggtcaaga ccttaagcgt ttgctgggct tcatccgtta
    26341 ccgtacccaa ttttttcaac aacaaaacaa tatatactgc caccgccgcg atggacaagg
    26401 caataatcaa gacagaaatt tcaataatca tatcttctcc tttagggttg atagaatgga
    26461 atagaagact ttcttctccg caacacaacc atgttaatac caacgaggat taacacccca
    26521 gatagccatt gtgaaacacg tattcccaag aacatgaggc tgtccgtccg caagccttct
    26581 atcaaaaggc gaccacaacc ataccagact aggtagaaag ccgttatttc tccctgttta
    26641 aggaatttgg gccgtctacg taacacacaa accaagccaa agcctagcaa attccagaga
    26701 gactcaaaca agaaggttgg ttgacggtag gcaccatcaa tatacatctg gtctcggata
    26761 aaggctggca ggtagttcaa actttctact gccttaccat aggcctcttg gttaaagaaa
    26821 tttccccaac gaccgattgc ttgagcaatc atgaccgatg gcgctacaat atccaaaaaa
    26881 tccagggtat taataaagcg atactgggta aagaaataaa ggacaatcgc acctgtaatc
    26941 aaaccaccat agatggcaat accaccgttc cagatagcga agatagataa aatgttatcc
    27001 ttatattcac tccatgaaaa ggcgacgtag taaatccgtg cccctatgat agaaagcgga
    27061 aatgcgatta gaataaaatc taaaatatca tcctgacgaa ttttctttcg cggaccctct
    27121 tttgtcgcca gataaacacc tagaatcaga ccaagcaaaa tgcagattgc ataccaacga
    27181 atttctaagg gacctaattt aaccgcaata ggattcatat taagcctctt ctctattgtg
    27241 ttcaattaga ttagacaagc gttcttcgaa aatcttcgtt gcatcaaacc ccatctgttt
    27301 ggcacggtag ttcatggctg ctgcttcaat tacgacagaa atatttcgac cggtttttac
    27361 aggaatacgt atttgtggaa tagcaattcc tgctatttcg atagtatcgc cagagtttcc
    27421 caaacggtca aataccttac ctgtttcaaa attttcaaga tagacagcta attgtacttc
    27481 tgatgaatct ttcacggcac tagcaccgta tagactcatg atgtcgataa tgccgactcc
    27541 tcgaatctct aataagtggc gcagaatttc cgcaggttca ccccagagag taacatcgtc
    27601 ttttgcatag acatcaacac ggtcatcagc caccaatcgg tgtcctcgtt taaccaactc
    27661 aagaccagtc tcactcttac cgataccaga atcaccctga ataagcacac ccataccgta
    27721 aatgtccatc aagacaccgt gtacactcgt ccgctgagcc aggcgactat ccaagtaaga
    27781 agacaattct cccgatagac gactggttgc tgtcttgctt cggcagatag caatttgttt
    27841 ttcttttgca gccttgtaca tctcctcagg gatttccaag ccacgtgcca ctatgacaac
    27901 aggggtttct ggctggaaca tctgagaaag aacctgatag cggttatggg cagtcatggc
    27961 catcaaataa gaccactcct tcatccctat caactggatg cgctctggag catagtaatc
    28021 aaaatagcca gtcatttcca atcctggtcg ggtaatatct gccgtcgtaa tttgcttttg
    28081 caggagctct tccgtactgt aagcacattc aatccgcaga ttatcgacca aatctttcac
    28141 ataaacggtc atttcttccc tcactttcag ttttattata ttataccata agctaggggt
    28201 tgggggaaaa acaagtggct gatttggtaa aaagaatgag tttctttctt
//
LOCUS       DASFQD010000014        28050 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.014, whole genome shotgun sequence.
ACCESSION   DASFQD010000014 DASFQD010000000
VERSION     DASFQD010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 28050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28050
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.014"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(284..679)
                     /locus_tag="U1021_000477"
     CDS             complement(284..679)
                     /locus_tag="U1021_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000282448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEM4711061.1"
                     /translation="MYNKVILIGRLTAQPELTQTPTGKNLTRVTVAVNRRFKTENGER
                     EADFLNVIFWGKLAETLVSYGSKGSLISIDGELRTRKYEKDGSNHYVTEILGQSFQLL
                     ESRAQRAMRENNTGDDLADLVLEEEELPF"
     gene            734..1513
                     /locus_tag="U1021_000478"
     CDS             734..1513
                     /locus_tag="U1021_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2785 domain-containing protein"
                     /protein_id="HEM4711062.1"
                     /translation="MKEFLMEKIQTSQPYSNAELDWLLENIGHPDPTIRDELVYASFC
                     HIFLEGLITREQAQSLLQFSQETKPFSLEGSTQKRSFICLLYCLLLSVDNEPESIYHA
                     FLSTNDRELLFQQALNYLTIEHDWSGYDEKLGWIHTAAHGADFLLTASCHDQFPAEKS
                     KEVWQTIVTCLTKQSKVFSAGEEIRLAQIPVYLLLNEKVTSKELTEWISKLDFPNQEP
                     VDYFRWLNLQHFLSSLYFQLRSHQASTEEIEQAIEGKIEPA"
     gene            complement(1547..2170)
                     /locus_tag="U1021_000479"
     CDS             complement(1547..2170)
                     /locus_tag="U1021_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011284429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4479 and tRNA-binding domain-containing
                     protein"
                     /protein_id="HEM4711063.1"
                     /translation="MIFTYNKEHVGDVLMVIVAEDKGQPVQFERKGQVARVFLEETGK
                     TVAWNIFEASSLVELAGNGQVFMTDEQVATLNAELAKEGFTESLVNDNSPKFVVGQIV
                     ELVPHPDSYHLNICQVNVGDKTVQIVAGAPNAAQGLKTIVALPGAMMPSGSLIFPGKL
                     RGEDSFGMMCSPRELALPNAPQVRGIIELDDSAVVGEALDPAKHWKG"
     gene            complement(2189..3145)
                     /locus_tag="U1021_000480"
     CDS             complement(2189..3145)
                     /locus_tag="U1021_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1002 domain-containing protein"
                     /protein_id="HEM4711064.1"
                     /translation="MKKSLGKILLAPVVLGLSLSLAPLVQAEIQTDVINEKWGKPTLV
                     YGGGLSDAQATEVNNLFGISDVNNVSRQVVVGTDIDQYLGTSEADTASLYSSVLVQKQ
                     DAGKGVVVDIKTPQNITLITETQYANAAITAGATDVLIDVAAPIQVTGESALTGVYKA
                     LAANGDTVDTARTEVAQQELTTVNEVATAHAGDEQFDSSALDKAVAEIKTALADYKKS
                     NGQVASEADINTIINDVLTQNGLENVITADEISKLVTFAKAYQETSAIDSAEVAAQLN
                     QFKQQAEQQISEAYKNLQDSGILEKIGAFFENLWKGLTGLFA"
     gene            complement(3190..3510)
                     /locus_tag="U1021_000481"
     CDS             complement(3190..3510)
                     /locus_tag="U1021_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEM4711065.1"
                     /translation="MIFPTNLEEVAALIEDGKPTVFLFVTTWCGDCHYIKPHVPAIEE
                     AFPDLRFVQLDRDDFMPLAQEWAILGIPSLVVLENGQEIGRFVDKNRKTKEEIMNFLS
                     GLGR"
     gene            complement(3507..3791)
                     /locus_tag="U1021_000482"
     CDS             complement(3507..3791)
                     /locus_tag="U1021_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4651 domain-containing protein"
                     /protein_id="HEM4711066.1"
                     /translation="MKKKKTALLAGLLGAGVLTASAQFYRKIQEDRKKAQALQEVRDF
                     FADLGEIATVYVDETASTQTTLIGGVVMEAGQVFLFENTKGSIQYREEER"
     gene            3938..4999
                     /gene="pepA"
                     /locus_tag="U1021_000483"
     CDS             3938..4999
                     /gene="pepA"
                     /locus_tag="U1021_000483"
                     /EC_number="3.4.11.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl aminopeptidase"
                     /protein_id="HEM4711067.1"
                     /translation="MTLFEKIKEVTELQSLPGFEGQVRNHIRQKITPHVDRIETDGLG
                     GIFGIKDTAVENAPRILVAAHMDEVGFMISQIKPDGTFRVVELGGWNPLVVSSQAFTL
                     QLQDGRTIPAISGSVPPHLSRGANASGMPAVADIIFDAGFANYDEAWAFGVRPGDVLI
                     PKNETILTANGKNVISKAWDNRFGVLMVTELLESLSGQALPNQLIAGANVQEEVGLRG
                     AHASTTKFNPDIFLAVDCSPAGDIYGDQGKIGDGTLLRFYDPGHIMLKNMKDFLLTTA
                     EEAGVKFQYYCGKGGTDAGAAHLKNHGVPSTTIGVCARYIHSHQTLYSMDDFLEAQAF
                     LQAIVKKLDRSTVDLIKNY"
     gene            complement(5044..6300)
                     /locus_tag="U1021_000484"
     CDS             complement(5044..6300)
                     /locus_tag="U1021_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEM4711068.1"
                     /translation="MNYLEMRQWLSSRPASDLEHGVARVNWILERLDNPQLQVSTIHF
                     VGTNGKGSTLNALQSILQASGYIVGCFTSPSIIDFREQIVYQQEMISEEDFARIVTDL
                     QPLIEDLDQTAGLDAISEFEIVVVAMFVYFAHYQRPDILLVEAGMGGLQDATNVLAPL
                     AVVCPSIGLDHQAFLGETHAAIARHKVAVLRERVPLIYATDLPEVETVFEEHACQLQS
                     PTYAVGRDILLENSRAGFAVSSPLGRVEDLRLQMQGRHQEVNAALAVTTTQLLSLDFP
                     KITKETIRQGLSQAIWPGRLELIRPNLIIDGAHNNESIAVLTQLLEEKYADRDIEILF
                     AAINTKPVDQMLSQLSQFGPVSVTTFDDFRAVQLEDYPSGYERVQTYQEWLEQADLDN
                     PQKLYLITGSLYFITYVRKYILEELV"
     gene            complement(6354..6905)
                     /locus_tag="U1021_000485"
     CDS             complement(6354..6905)
                     /locus_tag="U1021_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate family ECF transporter S component"
                     /protein_id="HEM4711069.1"
                     /translation="MEKKIPKLTVQLLAAIAVILALVMIVENYFSIRISETLQVQFTF
                     IPNTILGAIAGPVWAAVFAAISDPIFVLFSGQTVLFTWILIEAVSAFIYGWFFYRKPL
                     DTKNKADWLYVAGVVVLIQVVISFIMTPIALHFHFGTPWIVLYSSRLIKAVFEIPLRI
                     VVTMLVLPSLQKIPELAKLMGIK"
     gene            complement(7220..8407)
                     /locus_tag="U1021_000486"
     CDS             complement(7220..8407)
                     /locus_tag="U1021_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000047536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEM4711070.1"
                     /translation="MSKTIAINAGSSSLKWQLYQMPEETVLAAGIIERIGLNDSISTV
                     KYDGKKESEVLDIPNHTVAVKILLEDLLKHNIIAAYEEITGIGHRVVAGGEIFKESAV
                     IGSKEVEQIEELSALAPLHNPAHVAAIRAFEEVLPEVLNVAVFDTAFHTTMPKHAYLY
                     PIPQKYYTDHKVRKYGAHGTSHYYVAHEAAKVLGRPIEELKLITAHIGNGVSITANYH
                     GQSVDTSMGFTPLAGPMMGTRSGDIDPAIIPYLIANVDELKDAADVVNMLNKQSGLLG
                     VSGYSSDMRDIESGLEAKNPDAVLAYNIFIDRIKKFIGQYLAVLNGADAIVFTAGMGE
                     NAPLMRNDVAEGLSWFGIELDPEKNVFGNYGDISTAESKVRVLVIPTDEELVIAREVE
                     RLK"
     gene            complement(8458..9411)
                     /locus_tag="U1021_000487"
     CDS             complement(8458..9411)
                     /locus_tag="U1021_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM4711071.1"
                     /translation="MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQH
                     ETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQTEPMQYNHQFTPDSIGFILSFLV
                     DQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASMADVMQAE
                     ISFAQGDAVRPQILKESQIILADLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSL
                     KYLEKDGFAILLAPNDLLTSPQSDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFV
                     LQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI"
     gene            complement(9468..9995)
                     /locus_tag="U1021_000488"
     CDS             complement(9468..9995)
                     /locus_tag="U1021_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComGG"
                     /protein_id="HEM4711072.1"
                     /translation="MLLKKKVKAGILLYALLMLAVFSLLLQFYLHRQEAESRLVQVAR
                     QETTAYIMAQMVLDKVEEELQEREAIAKKVASQTDEMKEDKETASETANIKEEGEVQE
                     TTSTKPEPTTKSVDTSSTQNVESKPIEDKGAVTFQEGQARYQLKGDQLLVTVELTSDG
                     LYTYQFPLGLSSEGG"
     gene            complement(9973..10407)
                     /locus_tag="U1021_000489"
     CDS             complement(9973..10407)
                     /locus_tag="U1021_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEM4711073.1"
                     /translation="MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLIQEAHYQRQ
                     SVQKEWLVFSSQLRSEWDRSELVKVENGKVYVDKGGQALAFGKSRSDDFRKTNDRGQG
                     YQPMLYQVDSASISQENQLVRIDFSFKNGEERTFIHAFKEKS"
     gene            complement(10394..10687)
                     /locus_tag="U1021_000490"
     CDS             complement(10394..10687)
                     /locus_tag="U1021_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002282213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Type II secretory pathway, pseudopilin PulG"
                     /protein_id="HEM4711074.1"
                     /translation="MVAIRKQKNKAYILLESLVALATLVTICSLILSAVDAGRRRQAW
                     ELEQQEVLNLAQMAVQTEQDNLALNGVTVQVKRTADRVAVFHEGKEVLSVVKK"
     gene            complement(10659..11066)
                     /locus_tag="U1021_000491"
     CDS             complement(10659..11066)
                     /locus_tag="U1021_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEM4711075.1"
                     /translation="MLRRKNKAFTLFESLLTLFVVSFLAVSLSGTVQTVFRSVQEEIF
                     LWEFEAIYKDSQKLAASSHQSVSLTIGEQEVANGRQAVQVPRNVEVLEGKTITFEEDG
                     GNSSLTKIRFRLSRKTVTYQLYIGSGRYKKTEE"
     gene            complement(11047..11328)
                     /locus_tag="U1021_000492"
     CDS             complement(11047..11328)
                     /locus_tag="U1021_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEM4711076.1"
                     /translation="MKKLVEMKVKGFTLVEMLVVLGIISLLLLLFVPNLSQQKDAIQK
                     KGDAAVVKVVESQMELYELEHDEEATVADLQAKGYITEKQAKQYATAKK"
     gene            complement(11330..12295)
                     /locus_tag="U1021_000493"
     CDS             complement(11330..12295)
                     /locus_tag="U1021_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEM4711077.1"
                     /translation="MARQRKVIELFNNLFASGFHLGEIVDFLKRSQLLADPYTQVLSD
                     GLLAGKPFSSLLADLRFSDAVVTQVALAEVHGNTSLSLSHIQSYLENVSKVRKKLIEV
                     ATYPVILLGFLLLIMLGLKNYLLPQLEEGNAATVLINHLPTIFLSLSGLSLVAVLAGM
                     VWFRKTNKIKVFSCLAALPFFGKLIQTYLTAYYAREWGSLIGQGLDLPQIVGLMQEQQ
                     SQLFREIGQDLEQSLSNGQSFHEHIKTYAFFKRELSLIVEYGQVKSKLGSELTVYAAE
                     CWEDFFSRVNRAMQLIQPLVFLFVALMVVLIYAAMLLPIYQNMEL"
     gene            complement(12279..13229)
                     /gene="tadA"
                     /locus_tag="U1021_000494"
     CDS             complement(12279..13229)
                     /gene="tadA"
                     /locus_tag="U1021_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly complex ATPase component
                     TadA"
                     /protein_id="HEM4711078.1"
                     /translation="MIQEKARKLIEEAVADRVSDIYLVPRGQDYQVYHRIMDEREFVQ
                     DLAEEEVTAIISHFKFLAGLNVGEKRRSQQGSCDYDYGSGEISLRLSTVGDYRGKESL
                     VIRLLYDNDKELKFWFEAAERLAEEIKGRGLYLFSGPVGSGKTTLMYHLARLKFPDKQ
                     ILTIEDPVEIKQEDMLQLQLNEAIGATYDNLIKLSLRHRPDLLIIGEIRDAETARAVI
                     RASLTGATVFSTVHARSISGVYARMLELGVSPEELNNALQGIAYQRLIGGGGVVDFAK
                     GNYQNHSADQWNEQIDRLFAAGHISLRQAETEKIALGSPA"
     gene            13315..14265
                     /locus_tag="U1021_000495"
     CDS             13315..14265
                     /locus_tag="U1021_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEM4711079.1"
                     /translation="MKKLKKGDHIRVVSPSSSIERIGGFEANLAAKEKLEDLGFKLSF
                     SEHYFENDMFYSAPIAGRVADLEAAFADESVDAILTTIGGFNCNELLPYLNFDLIAQN
                     PKIFCGYSDTTALLNAIYAKTGMQTYMGPSYSSFKMREGQDYQTQAWLKAVTQDSFDL
                     TPSPEWSSDAWYLPDAPRTFYPTEWKVYNPGQASGIAIGGNISTLNLLTGTEFAPRPD
                     EYILFLEEAEDDDYLIIARHLTALLQAYPNPQALVFGRFPKETKMTEEILLAILDKHP
                     ILKTIPVLYDLDFSHTQPLFTITIGGQVELDTKAFSIRFS"
     gene            complement(14300..14665)
                     /locus_tag="U1021_000496"
     CDS             complement(14300..14665)
                     /locus_tag="U1021_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1033 family protein"
                     /protein_id="HEM4711080.1"
                     /translation="MYQVIKMYGDFEPWWFLDGWEEDVTSRAAFDRYEDALNAFQKEW
                     VRLSEDFPMKKSKNGTMVAFWDESDQHWCEECDEYLQRYHSLMLVEARENLPAGFIKQ
                     PTQPRVRPCKLKQNNCVNE"
     gene            complement(14814..18461)
                     /gene="rpoC"
                     /locus_tag="U1021_000497"
     CDS             complement(14814..18461)
                     /gene="rpoC"
                     /locus_tag="U1021_000497"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEM4711081.1"
                     /translation="MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPERD
                     GLFDEVIFGPTKDWECSCGKYKRIRYKGITCDRCGVEVTRAKVRRERMGHIELKAPIS
                     HIWYFKGIPSRMGLTLDMSPRALEEVIYFAAYVVIDPKDTPLEHKSIMTEREYRERLR
                     EYGYGSFVAKMGAEAIQDLLKQVDLPKEIAALKEELKTASGQKRIKAVRRLDVLDAFY
                     KSGNKPEWMILNILPVIPPDLRPMVQLDGGRFAASDLNELYRRVINRNNRLARLLELN
                     APGIIVQNEKRMLQEAVDALIDNGRRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLG
                     KRVDFSGRSVIAVGPTLKMYQCGVPREMAIELFKPFVMREIVARDIAGNVKAAKRLIE
                     RGDDRIWDILEEVIKEHPVLLNRAPTLHRLGIQAFEPVLIDGKALRLHPLVCEAYNAD
                     FDGDQMAIHVPLSEEAQAEARILMLAAEHILNPKDGKPVVTPSQDMVLGNYYLTMEDA
                     GREGEGMVFKDADEAVMAYRNGYVHLHTRVGIATDSLDKPWKDNQKHKVMMTTVGKIL
                     FNAIMPEGLPYLQEPNNANLTEGTPDKYFLEPGSDIKAAIAELPINPPFKKKNLGNII
                     AEIFKRFRTTETSALLDRLKDLGYYHSTLAGLTVGIADIPVIDNKAEIIEESHERVEQ
                     IKKQFRRGMITDDERYAAVTDEWRSAKEKLEKRLVEKQDPKNPIVMMMDSGARGNISN
                     FSQLAGMRGLMSAPNGRIMELPILSNFREGLSVLEMFFSTHGARKGMTDTALKTADSG
                     YLTRRLVDVAQDVIIREDDCGTDRGLDIRSITDGKEMIEPLEERLQGRYTKKTVKHPE
                     TGAVIIGPNQLITEDIAREIVNAGVEQVTIRSVFTCNTRHGVCRHCYGINLATGDAVE
                     VGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNSDITQGLPRVQEIFEARNPKGEAVI
                     TEVKGEVIAIEEDASTRTKKVFVKGKTGEGEYVVPFTARMKVEVGDQVARGAALTEGS
                     IQPKRLLEVRDVLAVETYLLSEVQKVYRSQGVEIGDKHIEVMVRQMLRKVRVMDPGDT
                     DLLMGTLMDITDFTDANAEVVIAGGIPATARPVLMGITKASLETNSFLSAASFQETTR
                     VLTDAAIRGKRDNLLGLKENVIIGKIIPAGTGMARYRNLEPQAINEVEIIEDTVAEEL
                     TAEAELEAVTE"
     gene            complement(18639..22211)
                     /gene="rpoB"
                     /locus_tag="U1021_000498"
     CDS             complement(18639..22211)
                     /gene="rpoB"
                     /locus_tag="U1021_000498"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEM4711082.1"
                     /translation="MAGHEVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFQDFLDYG
                     LKEVFEDVLPVSNFTDTMELEFVGYELKEPKYTLEEARAHDANYSAPIYVTFRLVNKE
                     TGEIKTQEVFFGEFPIMTEMGTFIINGAERIIVSQLVRSPGVYFNDKVDKNGKVGYGS
                     TVIPNRGAWLELETDSKDIAYTRIDRTRKIPFTTLVRALGFSGDDEIFDIFGDSELVR
                     NTIEKDIHKNPADSRTDEALKEIYERLRPGEPKTAESSRSLLTARFFDPRRYDLAPVG
                     RYKINKKLNLRTRLLNQTLAEHVINGETGEIVLEAGTVLSRDVLESIENQFDELNQVE
                     YIPNDAAVVVEPVLLQKFKIVAPTDPDRVVTVIGNANPAENVRTVTPADILTEMSYFL
                     NLAEGLGRVDDIDHLGNRRIRAVGELLANQVRIGLTRMERNLRERMSVQDNEVLTPQQ
                     IINIRPVTAAIKEFFGSSQLSQFMDQHNPLSELSHKRRLSALGPGGLTRDRAGYEVRD
                     VHYTHYGRMCPIETPEGPNIGLINNLSSYGHLNKYGFIQTPYRKIDRATGTVTNEIVW
                     LTADEEDAYIVAQSTSPLDENNRFVDEIVMGRHQGNNQEFPAASADFMDVSPKQVVAV
                     ATACIPFLENDDSNRALMGANMQRQAVPLIDPKAPYVGTGMEYQAAHDSGAAIIAQHD
                     GKVTYSDADKVEVRREDGSLDVYHVSKFRRSNSGTAYNQRTLVKVGDIVEKGDFIADG
                     PSMENGEMALGQNPIVAYMTWEGYNFEDAVIMSERLVKDDVYTSVHLEEYESETRDTK
                     LGPEEITREIPNVGEDALRNLDEMGIIRIGAEVKEGDILVGKVTPKGEKDLSAEERLL
                     HAIFGDKSREVRDTSLRVPHGADGVVRDVKIFTRANGDELQSGVNMLVRVYIAQKRKI
                     KVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPSRMNIGQVMELHLG
                     MAARNLGIHIATPVFDGASSEDLWSTVKEAGMDSDAKTILYDGRTGEPFDNRVSVGVM
                     YMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASNVLQ
                     EILTYKSDDVTGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRVLDEDDNE
                     VELRDLDEGEDDDIIHVDDLEKARAKAAADAAAAFAAEEAEGKE"
     gene            complement(22768..25191)
                     /locus_tag="U1021_000499"
     CDS             complement(22768..25191)
                     /locus_tag="U1021_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HEM4711083.1"
                     /translation="MATKSDKQDFKKKISALGLGDVVGVFLRTLKLLFNSVAVLVFLF
                     GLFGAGIGIGFVVSLFDDVKIPKTEELVAKVSEVSRISTVTYSDGSLVSEVNSDLLRV
                     PITSEEVSNYLKQAVIATEDETFETHNGVVPKAVLRAALGSVGLGSSSGGSTLTQQLI
                     KQQLVGDAPTFTRKANEIVSALALERNMTKEEILTIYLNVSPFGRNNQGRNIAGVEAA
                     AQGIFGKPAKDLTVPQAAFIAGLPQSPIVYSPYASDGTRKSDEDMVYGIERYQDVLFN
                     MYRASFLTKEEYETYKAYDIKQDFIAPAPVMADTKDYLYYKVMEEAQEVMFDYLVKRD
                     KVSKNDLKNDETKASYEELAKQELSQGGYTIKSTVDQKIYAAMQSVVANYGSVLDDGN
                     EYVETGSVLIDNATGAILGFVGGRDYATNQNNHAFDTLRSPASTIKPLLAYGIAIDQG
                     LIGSASILSDYPTNFSSGQPIMYGSGRGTGMMNLQTAIDRSVNIPAFWTYKMMRNAGV
                     DAKAYMDKMNYHIPMYNIESVPLGGGVEISVLTNTNAYQTLANGGVYNKHYIVESITA
                     SDGTVVYQHKAAPVQVYSKATASIMNQLLRQVVNSGYTTTFKSRLSGLNPQAASSDFV
                     GKTGTSNEVNDVWLMLSTPRVTLGTWAGNDDNSEMYVWTGYHNNSQYVAHMVDALYNV
                     NADMFAGKFELDSSVIASSVVASTGQRAGTTQVNGRQVTVGGAMTTSYWAKNGAPVTS
                     YNFMVGGTDSDRAQAWNTIIGSQTPTSSSSTQRSSSTRSSTASSANNTTQSSETQTAT
                     SEQANNDSP"
     gene            25345..26601
                     /locus_tag="U1021_000500"
     CDS             25345..26601
                     /locus_tag="U1021_000500"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011184085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEM4711084.1"
                     /translation="MNIFEELKARGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSL
                     HLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVTKIQ
                     GQLSRFLDFENGDNKAEMVNNYDWFSDISFIDFLRDVGKYYTVNYMMSKDSVKKRIET
                     GISYTEFAYQIMQGYDFYELNDKHNVTLQIGGSDQWGNMTAGTELLRRKADKSGHVMT
                     VPLITDSTGKKFGKSEGNAVWLDADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLDE
                     IAEIEKQFDAARHERLAQKILAREVVTLVHGEEAYNQALNITEQLFAGNIKNLSAKEL
                     KQGLSNVPNYAVQAEDNLNIVELLVTSGIVNSKRQAREDVQNGAIYVNGERVQDLDYT
                     LSDSDKIDGELTVIRRGKKKYSVLTY"
     gene            26605..27387
                     /locus_tag="U1021_000501"
     CDS             26605..27387
                     /locus_tag="U1021_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1211 domain-containing protein"
                     /protein_id="HEM4711085.1"
                     /translation="MKNTKQNPKNQEFLNDYFEQMAQEASLLHPELEHLSADEHQAFL
                     DQLYREDETRRAKRLKEHLEVFSDAVIGVIITMMLLEIPLPSDTVDTHHFFTGILIFF
                     VSFFIVADFWYDNHKILGQIEHATSKILIVQFNFMATLALIPLFTRWMMEGITTTAVV
                     GYGVVTIAVNLCQSILNYFVLQEKFAGTTYTKRFVSMAHLRQLVTVALFNIVIILFAY
                     FNPTLAFYFYILRPIVSFLGAAFFEKKRQERKEKMAVRVNHI"
     gene            27441..27818
                     /locus_tag="U1021_000502"
     CDS             27441..27818
                     /locus_tag="U1021_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEM4711086.1"
                     /translation="MTCIFCHQLEEEDIIYQTEHFKVVWDIDPVQTGHLLIISKKHYD
                     TLSQISPIIRYELSDLEVFLTDKLCQALAIDGVTIACNDRLFDADTHFHLHLIPRFQS
                     DGFWDQISLAQVQLDLNAFLKAL"
BASE COUNT         7813 a         6710 c         5654 g         7873 t
ORIGIN      
        1 agacctgaga agaggagtct tgccttttac tcagccgcct atctactctg gctagtctgg
       61 atatttttct ttagccaccc tcattacatc atctttttct tctacggagt tctcctactt
      121 tctctaatta tcatgctgat agaatggtgg agtgacagga aatagaacac aaaaaacacc
      181 aactttcgtc ggtgttttta aggagatatg aaaaatattt aggattgact atagtatagc
      241 ctatttttca atacgctcca tcggtcttgg gactgatatt gctttaaaac ggtaattcct
      301 cctcttccaa gaccaagtca gctaaatcat cgcctgtgtt attttcacgc atggcacgtt
      361 gggcacggct ttcgagcaac tggaaggatt gacctaagat ttcagtcaca tagtggttgc
      421 tgccgtcttt ttcgtattta cgggttcgca actcaccgtc aatcgaaatc agactaccct
      481 tgctaccata ggagacaagt gtttccgcca gtttgcccca gaaaataaca ttaagaaaat
      541 ctgcttcacg ctcaccattt tcagtcttaa atcggcgatt gactgcgact gttacacgag
      601 tcaaattttt accagttggt gtttgagtga gttccggttg ggccgtcaag cgaccgatta
      661 aaataacttt attatacatt ttatatcctc ctacttattt attcgtagaa ggattagaaa
      721 aggagcgaaa atcatgaaag aatttttgat ggaaaagata cagacctccc aaccatattc
      781 caatgccgaa ctggattggt tgttggaaaa catcggccat ccagacccta ctatacgcga
      841 cgaactggtc tatgctagtt tttgccatat ctttttggag ggcttgatta caagagaaca
      901 agcacagtcg ctactgcaat tctctcaaga aaccaagcca ttttccctag aaggctccac
      961 acaaaaacga agttttattt gcttacttta ctgtctgttg ctgtctgtcg ataatgagcc
     1021 agagtctatt tatcatgcat ttttaagcac taacgaccgt gaactactct tccagcaggc
     1081 cttgaattat ttgacgattg aacatgactg gtctggctac gatgaaaaac tcggttggat
     1141 ccataccgct gcccacggag ctgattttct tctgactgca agctgtcatg atcaatttcc
     1201 cgctgaaaaa agcaaagaag tctggcaaac tattgtcact tgtctaacta aacaaagtaa
     1261 agttttctca gctggcgagg aaatccgttt ggcacaaatt cctgtatatt tactactgaa
     1321 tgaaaaagta accagcaaag agttgacaga atggattagc aagctggact ttccaaatca
     1381 agaaccagta gactacttcc ggtggctcaa tctccaacat tttctgtcta gtctttactt
     1441 ccaacttagg tcacatcaag catcgaccga agaaatcgaa caggctattg aaggaaaaat
     1501 tgaaccagca taaaagaatt ggccaaagcg accaattctt ctttttctat cccttccagt
     1561 gtttagctgg atcaagtgct tctccgacta ctgcggagtc gtccaattcg ataatgccac
     1621 ggacttgtgg tgcgtttggc agagccaatt cacgcggact acacatcata ccaaagctat
     1681 cttcaccacg caatttccct gggaaaatca ggctaccgct cggcatcatt gcccccggaa
     1741 gagccacaat agttttcaat ccttgggcag catttggtgc tccagctacg atttgaacgg
     1801 ttttgtcacc aacattgacc tgacagatat tgaggtggta gctgtctgga tgcggaacca
     1861 gttccacaat ctgaccgaca acgaatttcg gactattgtc gttgactaag ctttcagtaa
     1921 aaccttcctt agccaattca gcattcaagg tcgcaacttg ctcgtctgtc atgaaaacct
     1981 gaccatttcc agcaagctca accaaacttg atgcttcaaa gatattccag gctactgttt
     2041 ttcctgtttc ctctaggaaa acacgcgcca cttgaccctt gcgttcaaac tgaacaggct
     2101 gacccttgtc ttcagccaca atcaccataa gaacatcgcc gacgtgttcc ttattatatg
     2161 taaaaatcat ttctttttca tttctccttt atgcaaatag accggtcaag cctttccaaa
     2221 gattttcaaa gaaggcaccg attttttcta aaatccctga atcttgtaga ttcttatagg
     2281 cttctgaaat ttgttgctcc gcctgttgct tgaactggtt gagttgggca gcaacctcag
     2341 ccgaatcaat agcagaggtt tcctgataag ctttggcaaa tgtgactagc ttagaaattt
     2401 catctgctgt gatgacattt tctaaaccgt tttgggtcaa aacatcattg atgatggtgt
     2461 tgatgtcagc ctcagaagcc acctgaccat tggacttttt gtagtcggca agagcagtct
     2521 tgatttccgc cactgcctta tccaaagcag agctgtcaaa ttgttcatca ccagcatggg
     2581 ctgtcgctac ttcattaaca gttgttaatt cttgttgagc tacttcagtt cgagcggtat
     2641 caactgtgtc accattggct gcaagagcct tgtaaacacc tgtcagagcg gactctcccg
     2701 tcacctgaat gggtgccgca acgtcaatca agacatctgt cgcaccagct gtaatagccg
     2761 cattggcata ctgcgtttcg gtaatcaagg tgatgttctg tggcgtctta atatccacca
     2821 caaccccttt gccagcgtcc tgcttttgca ccaagacaga tgaatagagg gaggctgtgt
     2881 ccgcttcaga tgtacctaaa tattggtcta tatccgtacc aacaaccacc tgacgactga
     2941 cattattgac atccgaaata ccaaatagat tgttaacctc tgtcgcctgc gcatctgaca
     3001 aacctccacc gtagactagt gttggcttgc cccatttttc attgataaca tctgtttgaa
     3061 tctcagcctg caccaaggga gcaagactca aactcaaccc cagcaccaca ggtgctagaa
     3121 ggatttttcc tagtgatttc ttcatgttct ttcctttctt ttgggaaatg gcagagcttc
     3181 tctgctaatt tatctaccca gtccagataa gaagttcatg atttcttcct tggtcttgcg
     3241 attcttatcg acaaaacgac cgatttcctg accattttcc aaaacaacca gacttggaat
     3301 gcctaaaata gcccattcct gtgccaaagg cataaagtca tctcgatcca gttgcacaaa
     3361 acggagatct ggaaaagcct cttcgatagc cggcacatgc ggtttgatat agtggcaatc
     3421 tccacaccaa gttgtcacaa atagaaaaac agtcggcttg ccatcttcaa tcaaggcagc
     3481 tacttcttca agatttgttg gaaaaatcat ctttcttcct ccctgtattg aatagaacct
     3541 ttggtatttt caaacaaaaa tacctgtcct gcctccatca caacccctcc gataagagtg
     3601 gtctgcgtag aagccgtttc atccacatag accgtggcaa tctctcctaa atcagcgaaa
     3661 aagtcacgca cctcctgcaa ggcctgtgct tttttacggt cttcttggat tttacggtaa
     3721 aattgagcac tagcggtgag cacacctgcc cccaataagc ctgctagcaa ggctgtcttt
     3781 ttctttttca tgttgactat tttatcatat ttcccaggaa ttttcccaaa aatgccattg
     3841 gacttgtgac agctgagaag atcctgttga cataatagta ggacaagtct agctcttcgt
     3901 gataaaatag tagtaatcat gtcatggagg aagaagaatg actctttttg aaaaaattaa
     3961 agaagtaacc gaattgcaaa gtttaccagg atttgaagga caagtccgca accatatccg
     4021 ccaaaaaatc acgccacatg tggaccgcat tgaaacagat gggctaggtg gaatttttgg
     4081 tatcaaggat acggctgttg aaaatgctcc tcgtatccta gtggccgccc acatggatga
     4141 agtcggcttt atgattagcc aaatcaagcc tgacggtact ttccgtgttg ttgagctagg
     4201 tggctggaat cctctggttg tttctagcca agccttcact cttcagttgc aggacggtcg
     4261 taccattcca gctatctcag gctcagtacc acctcacctt tcacgggggg ctaacgcttc
     4321 tggcatgcct gccgttgctg atattatttt cgatgctggt tttgccaatt atgacgaagc
     4381 ttgggcgttc ggcgttcgtc caggggatgt cctcattccc aaaaatgaaa ccattctaac
     4441 agccaacgga aaaaatgtta tttctaaggc ttgggacaac cgcttcggtg tccttatggt
     4501 gacggaattg ctagaaagcc tatccggtca agctctacca aatcagttga ttgctggggc
     4561 caatgtgcaa gaagaggttg gtcttcgtgg tgctcatgcc tctacaacca agttcaatcc
     4621 agacattttc ctcgctgttg attgctcgcc cgcaggtgat atttatggcg accaaggaaa
     4681 aattggtgac ggaactctgc ttcgtttcta tgacccaggt catatcatgt taaaaaatat
     4741 gaaggatttc cttctaacta ctgctgaaga agctggtgtt aaattccaat actactgtgg
     4801 taaaggtgga acagatgccg gtgcagccca cttgaaaaat catggtgttc catcaacaac
     4861 tatcggtgtc tgcgctcgtt acatccactc ccatcaaact ctctacagca tggatgactt
     4921 cttagaagct caagccttct tgcaggctat cgttaaaaaa ctagaccgct caacggttga
     4981 tttgattaaa aattattaaa acaaaagact ttgctgggtt gaatgcccgg caaagccttt
     5041 tttctataca agttcttcta aaatgtactt cctcacatag gtaatgaaat atagcgagcc
     5101 tgtaatcagg tagagttttt ggggattgtc caagtccgcc tgctccaacc actcctgata
     5161 ggtctgaact cgttcataac ctgacggata atcttctaac tgtaccgctc tgaaatcgtc
     5221 aaatgtcgta acgctgacag gtccaaattg gctaagctgg gacaacatct ggtccactgg
     5281 cttggtattg atggctgcaa agaggatttc aatatccctg tcagcatact tttcttccaa
     5341 gagttgtgtc aggacggcga tactttcatt attgtgggca ccgtcaatta tgagattagg
     5401 cctaatcaac tctaagcggc ccggccagat ggcttgggac aagccctggc ggatggtttc
     5461 cttggtaatc tttggaaaat caaggctgag aagctgagtt gttgtcactg ccaaggctgc
     5521 attgacctcc tggtgacgcc cctgcatctg tagcctcaaa tcctcaacac ggccgagagg
     5581 acttgaaact gcaaagcctg ctctgctatt ttccaaaaga atatcccgtc ccaccgcata
     5641 ggtcggactc tgaagctgac aggcatgctc ctcaaatact gtctccactt ctggcaaatc
     5701 ggtcgcatag atgagcggaa ccctctcgcg caagacagca accttgtgac gggctatagc
     5761 agcgtgggtc tctcccaaaa aagcctgatg gtccaagccg atggacgggc aaactactgc
     5821 caagggagca aggacattgg tcgcatcctg caaaccgccc atgcctgcct ccaccaagag
     5881 aatatcggga cgctggtagt gggcaaagta gacaaacata gccactacta caatctcaaa
     5941 ctccgagatg gcatccagtc cagccgtctg gtccaagtcc tcaatcaagg gttgcaagtc
     6001 tgtcacaatc ctcgcaaaat cttcctccga aatcatctct tgctggtaga caatctgctc
     6061 tcgaaaatca atgatagacg gtgatgtaaa gcagccgacg atgtagccag aagcctgtag
     6121 gatggactgt aaggcgttga gggtcgagcc cttgccattt gtaccaacaa agtgaatagt
     6181 cgacacttga agctggggat tgtccaagcg ttccaaaatc cagttgacac gtgcaacgcc
     6241 atgttctaaa tcagaggccg ggcgactaga caaccactgc ctcatttcta aataattcat
     6301 gtttccctct ctataaaaag caacaggggg atgacctgtt gcttgatact gttttattta
     6361 atgcccatta acttggccaa ttcaggtatt ttttgtaaac ttggcaagac aagcatagtc
     6421 acgacaatgc gtaatggaat ttcaaaaact gccttaatca agcgactgct atacagaaca
     6481 atccaaggtg ttccaaaatg gaaatggagg gcaatcggtg tcatgataaa ggaaatcaca
     6541 acctgaatca agacaacaac ccctgcaaca tagagccaat cagccttgtt cttggtgtct
     6601 agcggttttc gatagaagaa ccagccatag ataaaagccg ataccgcctc aatcaaaatc
     6661 caagtgaaga ggacagtttg cccactaaac aagacaaaga tcgggtctga aatcgctgca
     6721 aagacagctg cccaaactgg accagcaata gctcccaaaa tagtattggg aataaaggta
     6781 aactggacct gcaaggtttc tgagatccga atggagaaat agttctccac aatcatgacc
     6841 aaggcaagga tcacagcaat agcagccaac aactgcaccg ttagttttgg aattttcttt
     6901 tccataaaaa atgctccttt ttcaaaatgg agctgtcgtg tatattcgac agcggatgca
     6961 atggtttacc gcgccacttt tagctaagga cttgatgttc cgactaaaac agacatcaac
     7021 cccaaccaaa agctagcttc gttatgtggc aacatcccat ccacatacac ttgacgcaaa
     7081 ccatctactc tgtgcaaatt tctttgctag tctattgtat cacacactat atattttgac
     7141 cacttgctaa aaactatacc tttctaaagg tataaactat aagagaaact ggcagtctcc
     7201 gactaccagt tagtttttct tatttcaaac gttccacttc acgcgcaata accaattctt
     7261 catccgttgg aataaccaag acacgaactt ttgattctgc cgttgaaatg tcaccatagt
     7321 tgccaaatac atttttttct ggatccaact caataccgaa ccaagacaag ccttctgcta
     7381 cgtcattgcg cataagcggt gcattttcac ccatacctgc cgtgaagaca atagcatctg
     7441 ccccatttaa aactgcaaga tactgaccga taaatttctt aatacggtca atgaaaatat
     7501 tgtaggccaa cactgcatct gggttcttag cttccaaacc tgattcaatg tcacgcatat
     7561 cacttgaata acccgataca ccaagcaaac ctgattgttt attcaacatg ttaacaacat
     7621 ccgcagcgtc cttcaactca tcaacatttg caatcaagta aggaataatc gctggatcaa
     7681 tatctcccga acgagttccc atcattggac cagctagagg agtgaagccc atagaagtgt
     7741 caactgattg accgtggtag ttggcagtaa tagatacacc gtttccgatg tgagccgtaa
     7801 tcaattttaa ttcctcaatc ggacgtccca atacttttgc tgcctcatgc gctacataat
     7861 agtgactagt tccgtgagct ccatacttac gaaccttgtg gtcggtatag tacttttgtg
     7921 gaatcggata aagataggca tgctttggca tcgtagtgtg aaaggctgta tcaaaaacag
     7981 ctacattcaa aacttctggt agtacttcct caaatgcacg aattgctgct acgtgagcag
     8041 ggttatgaag cggtgccaaa gcacttagct cttcaatttg ctcaacctct tttgatccaa
     8101 taacagctga ttctttgaaa atctctccac ctgcaacaac acggtgtccg ataccggtaa
     8161 tttcctcgta agcagcaatg atgttgtgct taagcaagtc ttctaggaga atcttaaccg
     8221 caaccgtatg attaggaata tctaaaactt cactttcttt cttcccatca tacttaactg
     8281 ttgagatgga atcgttcaaa ccgatgcgct caataatccc tgccgctagc actgtttctt
     8341 ctggcatttg ataaagttgc catttcagac ttgaactacc tgcattaatt gcaattgttt
     8401 ttgacatatc gttccccttt ttaaagcgtt ttcctaatta gtataacaga tttttactta
     8461 aattgcattc tcttgcttcc aatttttgaa attgagcatg aacttctgaa tcgcttctgg
     8521 ttcttgaaga ctttgtaagg gataaacaaa cggcgtcaac gatcttgcag ctttcttttg
     8581 caagacaaaa atagacttgg ccatagcagc cttcccaaag agatttggtg gcagggcaat
     8641 catggcaaca atattagctt gctcctgtaa ccaacctttc agcaaatcgc tttgcggact
     8701 agtcaataaa tcatttggag ccaacaaaat cgcaaagcca tctttttcca gatatttgag
     8761 ggattgttcc atgagcaaat gatgggcgta ggtatgttca tttgggctgg cgacctgata
     8821 acggctggca atctggtcat ctggatagta accaatcggc aaatccgcaa gaatgatttg
     8881 gctttccttc aaaatctgcg gacgtaccgc atcgccctgg gcaaatgaaa tctccgcctg
     8941 cataacatct gccatactag ctgacaaatc aatcaagagg tcgtccactt cgatccccaa
     9001 gtaatccaat tctttctggc tggcgttgag aatggtctga gctagattgc ctgtccccga
     9061 accaatttcc agaaccgtca ccttttgagt cggcaccaat tggtctacta gaaaagatag
     9121 gataaatccg atagagtctg gtgtgaactg gtgattgtac tgcatgggtt cagtctgatt
     9181 ggccttgatg agtaggaatt ggtaggcacg acgccattct tccttggtta aatctagttg
     9241 tttcaaggtc tgattgttat tgacaacaag gtccgtctca tgctgattag ctacgtaagc
     9301 agcattttgc tcaatcatgg catcatagat attggtacct agctggtttt ggatagtctg
     9361 tacgttttct aatagcaggt cgtaagcctg ttcgatcttc tcaaaattca tactcctatc
     9421 ttatcaaaat ttcatagact ttgcaccaaa aaggagagca agtcaactca ccctccttct
     9481 gatgatagcc ccaaaggaaa ttgataggta tacagaccat cacttgttaa ctcaactgta
     9541 accaatagtt ggtctccttt aagttgataa cgagcctgac cctcctgaaa agtgaccgct
     9601 cccttatctt ctattggttt gctttccacg ttttgagttg atgatgtgtc aactgatttt
     9661 gtagttggtt ctggcttagt gcttgttgtt tcttgtacct ccccttcttc cttaatatta
     9721 gccgtttcac tagctgtttc tttatcttcc ttcatttcat ctgtttgact tgctaccttc
     9781 ttggcaattg cttcacgctc ttgcaattcc tcttcgacct tgtccaagac catctgagcc
     9841 atgatataag cagtcgtttc ttgccttgcc acctgtacca agcgactctc agcctcttgc
     9901 cgatggagat aaaactgaag caagagacta aaaactgcca gcatcaaaag ggcatagagc
     9961 agaataccag ccttaacttt tttctttaaa agcatggata aaggtccgct cctctccgtt
    10021 tttaaagcta aagtcgatac gcaccagctg gttttcttgg gaaatggatg cgctatccac
    10081 ctgatagagc atgggctggt agccctgtcc cctgtcattt gttttccgaa aatcatccga
    10141 ccgtgactta ccaaaggcca aagcctgacc acccttatca acatagacct tgccattttc
    10201 aaccttgacc aattccgacc ggtcccactc tgaccgcaac tgactagaaa ataccagcca
    10261 ctccttttgg acagattgac gttggtaatg tgcttcttga atcaacaact ttgacaagcc
    10321 ttcaaagacc agaagacttc ctgataggat gactaaggct accaagcatt ccaggagagt
    10381 aaaagcggga attttacttt ttaacaaccg ataaaacctc cttcccctca tggaaaaccg
    10441 caaccctgtc cgccgttcgt ttcacctgaa ctgtaacacc gtttaaggct aagttatctt
    10501 gctcggtctg gacagccatc tgagctagat tgagaacctc ctgttgttcc aattcccaag
    10561 cctgtcgcct acgacctgca tccaccgctg acaaaatcaa gctgcaaatg gttaccaggg
    10621 tcgcaagggc aaccaaactt tctagcaaaa tataagcctt attcttctgt tttcttatag
    10681 cgaccactcc ctatatataa ttgatacgtg actgtctttc gactaagccg aaagcgtatc
    10741 ttggtcagag aagaatttcc accatcttct tcaaatgtga tggtcttccc ctctaatact
    10801 tctacatttc tgggtacctg aactgcctga cgaccatttg ccacttcttg ttcgccgata
    10861 gtcaagctaa ctgactggtg agaactagca gccaatttct gactgtcttt atagatggcc
    10921 tcaaattccc agagaaaaat ttcttcctga acagaccgaa agaccgtttg tactgttcct
    10981 gatagggaaa cagctaaaaa actgacaaca aacaaggtca gcaggctttc aaacagggta
    11041 aaagccttat tttttcgccg tagcatactg ttttgcttgt ttttcagtaa tataaccttt
    11101 cgcctgcaaa tctgccaccg ttgcttcctc gtcatgttcc aattcataga gctccatctg
    11161 actctccact actttgacaa cagccgcatc ccccttcttc tgaatagcat ccttctgctg
    11221 gctcaaattt ggcacaaaaa ggagcaagag caggctaatg atccccaaaa cgactaacat
    11281 ttccaccaga gtgaaccctt ttaccttcat ttcaactaat tttttcattt tacaactcca
    11341 tattttgata aatcggcagc aacatggctg cgtagatgag aacgaccatt aaggccacaa
    11401 agagaaagac cagcggttgg attagctgca tggctctatt gacccgagag aaaaaatcct
    11461 cccaacattc agccgcataa actgtcaact cgctacccaa cttggacttg acctgaccgt
    11521 actcgacaat caaactcagc tcccgcttaa aaaaggcgta ggtcttaatg tgttcgtgaa
    11581 agctctgacc attggaaagc gactgctcca ggtcctggcc aatctcccga aaaagctgcg
    11641 actgctgctc ttgcatcaag cccacaatct gcggcaggtc caagccttgc ccaatcaaac
    11701 tcccccactc cctggcgtaa taggccgtca ggtaggtttg gatgagtttt ccgaaaaatg
    11761 gcagagctgc caagcaggaa aagaccttaa ttttattggt tttgcgaaac caaaccatac
    11821 cagctaagac cgccaccaaa ctaagtccac ttagagataa aaagatggtc ggtagatgat
    11881 taatcagcac tgtcgctgca ttaccttcct ccaactgggg cagaagatag tttttcaaac
    11941 ccagcataat caagagcaga aaacctagca agataactgg ataggtcgcc acctcaatca
    12001 attttttacg aaccttgcta acattttcca gataggactg gatatggctc aaactcaggc
    12061 tggtattgcc atgaacctct gccagagcca cctgtgtgac caccgcatct gaaaaccgca
    12121 aatctgccag caaacttgaa aaaggtttgc ctgcaagaag accatcggat aaaacttgtg
    12181 tatatgggtc tgccaaaagc tgactacgct taagaaaatc gacaatctct cccagatgaa
    12241 aaccactggc aaagagatta ttaaacagtt caatgacctt acgctggcga gccaagggca
    12301 attttttctg tttctgcctg ccgaagactg atatgtcctg ctgcaaaaag gcgatcaatt
    12361 tgttcattcc actggtctgc ggaatggttt tggtaatttc cctttgcaaa atccactaca
    12421 cctcctcccc caatcaagcg ttgataggca atgccttgaa gggcattatt taactcttca
    12481 gggctgaccc ccaattccaa catacgagca tagacacctg aaatagacct tgcatgaact
    12541 gttgagaaaa cggtagctcc cgtcaggctg gccctgatga ccgcccgcgc cgtttccgca
    12601 tcccgaattt caccgatgat gagcaagtct ggccgatggc ggagggacag tttgatcaga
    12661 ttgtcgtagg tggctccgat ggcttcattg agctggagtt gcagcatatc ctcctgcttg
    12721 atctcgacag gatcctcgat agtcaaaatc tgcttgtctg ggaatttcag cctggcaaga
    12781 tggtacataa gcgtggtctt accagagccg actggacccg aaaaaaggta gagccctcgt
    12841 cccttgattt cttctgcaag tcgctcggcc gcctcaaacc agaacttaag ttccttgtca
    12901 ttgtcataga gcaggcggat aaccagactt tccttaccac gataatctcc gacagttgat
    12961 aagcgaagtg aaatctctcc gctgccataa tcataatcac aggaaccctg ctgactacgg
    13021 cgtttttcac caacatttaa tcctgctaaa aacttgaaat ggctgatgat ggctgttact
    13081 tcctcctcag ccaagtcttg cacaaactcc cgttcatcca tgatgcgatg gtagacttgg
    13141 tagtcctgac cacgaggaac cagataaatg tcactgaccc tatccgccac cgcctcttca
    13201 atcaactttc ttgctttttc ttgaatcata aaacctcctc accctatcta ttcgcaagct
    13261 gacttgattt tccatacttt tttgttaaaa taataaaaaa acttggaggt tcctatgaaa
    13321 aaattaaaaa aaggcgacca catacgcgta gtcagtcctt cttcgtctat tgaaagaatt
    13381 ggtggttttg aagccaatct tgccgccaag gaaaaattgg aagacctggg cttcaaactc
    13441 tctttctcag aacattattt tgaaaacgat atgttttact ccgctccgat cgccggtcgt
    13501 gttgcggact tggaagccgc ttttgcggat gagtcggtcg atgccattct gacaaccatt
    13561 ggcggtttca actgtaacga actgctgcct tatctgaatt ttgatttgat tgcacaaaat
    13621 ccgaagattt tctgcggtta ttcggacaca actgccctgc tcaatgccat ctatgccaaa
    13681 acaggtatgc agacttacat gggaccatcc tatagcagct ttaagatgcg tgagggacaa
    13741 gattaccaga cccaggcttg gctcaaggct gtgacacaag actcctttga cttgaccccg
    13801 agtccagaat ggtctagcga cgcttggtat ctaccagacg cccctcgcac cttttaccca
    13861 acagaatgga aagtctacaa tccaggccag gcctctggta ttgccattgg cggaaacatc
    13921 tcaaccctca acctactgac tggaacagag tttgctccca gaccagacga atatattcta
    13981 tttttagagg aggcggaaga cgacgattat ctcattatcg ctcgtcactt gactgcactt
    14041 ttacaagcct atccaaatcc acaggctctt gtcttcggtc gttttcctaa agagaccaag
    14101 atgacggagg agattttgct ggcgattttg gacaagcacc ctattctcaa aaccatccca
    14161 gttctctacg atttggactt ttcccatacc cagcctctgt ttaccattac aatcggtggt
    14221 caagtggagc tcgacaccaa agccttttct atcagattca gctaaaaagg attgacccgc
    14281 aaaggtcaat ccttttttac tattcattta cgcaattatt ttgttttaat ttgcaggggc
    14341 gtacacgagg ttgcgtaggt tgcttaataa aaccagccgg taaattttct ctcgcttcta
    14401 ccaacatcag cgaatgatac cgctgcaaat attcatcgca ttcctcgcac caatgctggt
    14461 ctgattcatc ccaaaaagcc accatcgttc cattcttact tttcttcatt ggaaagtcct
    14521 ctgatagccg tacccactct ttttgaaagg cattcagtgc atcctcatag cgatcaaaag
    14581 cagccctact ggtaacatcc tcttcccaac catctaagaa ccaccagggt tcaaaatctc
    14641 catacatttt aataacttga tacataatat tacttccttt ttcgtacaca ttatatcgaa
    14701 attgtatgat ttaagaaaac attctgcttg ttaattcctt atcaagtcat atatatggtt
    14761 tctttccgaa tatcaaaaag cacatccctc aaagagagat gtgccatctt aatttattca
    14821 gttacagctt caagctctgc ttctgcagta agctcttctg ctactgtgtc ttcaatgatt
    14881 tcaacttcat tgatggcttg tggttcaaga ttacggtagc gggccatacc tgtacctgct
    14941 gggataatct taccgatgat aacgttctct ttaagaccga gaaggttgtc acgtttacca
    15001 cgaatagctg catctgtaag aacgcgagtt gtttcttgga aggatgcggc agacaagaat
    15061 gagttggttt caagggaagc cttcgtgata cccataagaa ctggacgagc tgttgccgga
    15121 ataccacctg caataaccac ttccgcattg gcatctgtaa agtcggtaat atccataagg
    15181 gtccccatga gaagatctgt gtcacctgga tccatgacac gaactttacg aagcatttga
    15241 cgaaccatta cctcgatgtg cttgtcgccg atttctacac cctggctacg gtaaactttt
    15301 tgaacttcag aaagaaggta agtttcaacc gccaagacat cacggacttc aagcaagcgt
    15361 tttggttgga tagaaccttc ggtaagggct gctccacgcg cgacttggtc accaacttca
    15421 accttcatac gggctgtaaa tggaaccaca tattcgcctt cgccagtttt ccctttaaca
    15481 aagactttct tggtacgagt agaagcatct tcttcaatag cgataacttc acctttaacc
    15541 tcagtgataa ccgcttcccc tttcggatta cgggcttcaa agatctcttg gacacgagga
    15601 agaccctgcg taatatcgct gtttgaggct acaccacccg tgtggaaggt acgcattgta
    15661 agctgtgtac caggttcacc gatagattgg gctgcaatcg taccaactgc ttcacccact
    15721 tcaaccgcat cacctgtcgc caagttgata ccgtaacaat gacggcagac accatggcga
    15781 gtgttacatg taaatacgct acggatagtt acttgttcaa cacctgcatt gacaatttca
    15841 cgggcaatat cttcagtaat caattggttt ggaccaatga taacggcacc cgtttcagga
    15901 tgtttaacag ttttcttagt gtaacgacct tgcaaacgct cttcaagtgg ctcgatcatt
    15961 tccttgccat ctgtgattga acggatgtca agaccacggt ctgttccaca gtcgtcttca
    16021 cggataataa cgtcttgggc aacgtcaacc aaacgacgag tcaagtaacc tgagtcagct
    16081 gtcttcaagg ccgtatccgt cataccctta cgggcaccgt gagttgagaa gaacatttcc
    16141 aatactgaaa gaccttcacg gaagttagac aagataggca attccatgat acgtccgttc
    16201 ggagctgaca tcaaaccacg cataccggcc aactgggaga agttggagat gttaccacgg
    16261 gcaccagagt ccatcatcat aacaattggg ttcttaggat cttgtttttc aaccaggcgt
    16321 ttttccaatt tttccttagc tgaacgccat tcatctgtaa cagctgcata acgctcatcg
    16381 tcagtaatca taccacgacg gaattgtttc ttgatttgtt ctacacgttc gtgagattct
    16441 tcaatgattt cagccttgtt gtcgataact gggatatcgg caatacccac tgtcaaacca
    16501 gcgagtgttg agtgataata acccaagtct ttcaaacggt caagaagggc tgatgtttca
    16561 gttgtacgga aacgcttgaa gatttcagcg atgatgttac cgagattttt cttcttgaat
    16621 ggtgggttga ttggcaattc tgcaatagca gccttgatat ctgaacctgg ttccaagaag
    16681 tatttatcag gagttccttc tgtcaagtta gcattgtttg gctcttgcaa gtatggaaga
    16741 ccttctggca taatcgcgtt gaacaagatt tttccgacag ttgtcatcat gaccttgtgt
    16801 ttttggttgt ctttccaagg tttatcaagg ctatctgttg caataccaac acgggtatgc
    16861 aagtgaacat agccattgcg gtaagccata acagcctcat ccgcatcctt gaagaccata
    16921 ccttcacctt cacgaccagc atcttccatg gtcaagtagt agttacccaa aaccatatcc
    16981 tgagatggtg ttacgactgg tttaccatct ttagggttaa ggatgtgttc tgccgcaagc
    17041 ataaggatac gtgcttctgc ttgtgcttct tctgacaatg gaacgtgaat cgccatctgg
    17101 tcaccgtcaa agtcggcgtt gtaagcttca cagacaagcg ggtgcaaacg aagggcttta
    17161 ccgtcgatca gaactggctc aaaagcctgg atacccaaac ggtgaagggt aggtgcgcgg
    17221 ttcaaaagaa ctgggtgttc tttgatcact tcttccaaga tatcccaaat acgatcatcc
    17281 ccgcgttcaa tcaaacgttt tgcagctttt acgttaccag caatatcacg ggcaacaatt
    17341 tcgcgcatga caaacggttt gaagagctcg atagccattt cgcgtggcac accacattgg
    17401 tacattttaa gcgttggacc aacggcgata acggaacgtc ctgagaagtc aacacgctta
    17461 ccaagcaagt tttgacggaa acgtccttgc ttacctttaa gcatgtggct gagtgatttg
    17521 agcggacggc tacctggtcc tgtaattgga cgaccacggc gaccgttgtc aatcaaagca
    17581 tctacagctt cttggagcat ccgtttttcg ttttgtacaa tgattcctgg agcgttaagt
    17641 tccaagagac gagccaaacg gttgttacga ttgataacac gacggtagag ttcgttcaaa
    17701 tcagatgcgg caaaacgacc accatccaac tgaaccatcg ggcgcaaatc tggtggaata
    17761 actggaagga tattgagaat catccactca ggcttgttac cagatttgta gaatgcatcc
    17821 aatacatcca agcgacgcac tgctttaatg cgtttttgac cagaagctgt tttcaattct
    17881 tctttcaaag ctgcgatttc ttttggaaga tcgacttgct tcaagaggtc ttgaatggct
    17941 tctgcaccca ttttggcaac gaatgaacca tagccatatt cacgcaaacg ctcacggtat
    18001 tcgcgctcag tcataattga cttgtgctca agcggtgtat ctttaggatc gatcaccaca
    18061 taagccgcga agtagataac ttcttcaagc gcacgtgggc tcatatccaa ggtcaagccc
    18121 atacgacttg gaataccttt gaaataccaa atatgtgaaa ttggtgcttt caactcaatg
    18181 tgtcccatac gttcacgacg tacttttgca cgagtcactt caacaccaca gcggtcacaa
    18241 gtaatccctt tataacggat acgcttgtat ttaccacatg aacactccca gtcttttgtt
    18301 ggaccaaaga tgacttcgtc aaagagtcca tcacgttctg gtttaagtgt acgatagttg
    18361 attgtttcag gttttttaac ctcaccgtaa gaccatgaac ggaccttact tggtgaagct
    18421 aacgtgattt gcatactttt aaatcgattt acgtcaacca ctaataatcc ctttcttttc
    18481 ttgtgagagg ctggattccc agacctcaaa ttcttgaata ataatcagca gaatggatag
    18541 ctggtaagct atttttctat aaatcagacg gtggaagacc gttggccttt atctctttca
    18601 gttctgaggt ttggaccaac ttgttccatc cattctaatt attctttgcc ttctgcttct
    18661 tctgctgcaa aggctgcggc tgcgtcagct gcggcttttg cacgcgcttt ttcaagatca
    18721 tctacgtgga tgatatcatc atcttcacct tcatcaaggt cacgcaattc aacttcatta
    18781 tcatcttcat caaggacacg catatcaaga ccaagtgatt gcaattcttt aacaagaacg
    18841 cggaatgatt ctggaacacc tggttttgga attggtttac ctttagtgat agcttcatag
    18901 gctttcaaac gaccagttac gtcatctgac ttataggtca agatttcttg aagaacgttt
    18961 gaagcaccat aagcttcaag ggcccatacc tccatctcac cgaaacgttg tccaccgaat
    19021 tgtgctttac caccaagcgg ttgttgggta acgagtgagt atggtccaac tgaacgtgcg
    19081 tgaagtttat cgtcaaccat gtggtggagt ttgatcatgt acatgacacc aactgacaca
    19141 cggttatcga atggctcacc agtacgtcca tcgtaaagaa tagtcttggc gtctgagtcc
    19201 ataccagctt ctttaacagt tgaccagagg tcttcagagc ttgctccatc gaaaactgga
    19261 gttgcaatgt ggatacccaa gttacgagca gccataccca agtgcaattc cataacctga
    19321 ccgatattca tacgtgacgg caccccgaga gggttcaaca tgatatcgac aggagttccg
    19381 tctggcaagt atggcatatc ttcaacagga acaatacgtg aaacgacacc cttgttaccg
    19441 tgacgaccgg ccattttatc tccgaccttg attttacgtt tttgagcgat gtaaacacgg
    19501 acaagcatgt tgacacctga ttgcaattca tcaccgttgg cacgagtaaa gattttcacg
    19561 tcacgaacga caccgtcggc accgtgaggt acacgaagtg atgtatcacg aacttcacga
    19621 gatttatctc cgaagatagc gtggaggagc cgttcttcag ctgacaagtc tttttcaccc
    19681 ttaggtgtga ctttaccaac aagaatgtcg ccctctttaa cttcggcacc aatacggata
    19741 atccccattt cgtccaagtt gcgaagagca tcttcaccaa cgtttggaat ttcgcgagtg
    19801 atttcttcag ggcctaactt ggtatcgcgt gtttctgatt cgtattcttc caagtgaaca
    19861 gatgtataga catcatcttt cacaaggcgt tcagacatga taaccgcatc ctcgaagttg
    19921 taaccttccc aagtcatgta ggcaacgatt gggttttgtc caagcgccat ttctccattt
    19981 tccatagaag gtccatcagc gatgaaatca cctttttcaa cgatatcgcc aactttaacg
    20041 agtgtacgtt ggttgtaagc agtacctgag tttgaacgac ggaattttga aacgtgataa
    20101 acgtctaaag aaccatcttc acggcgaact tcaaccttgt cagcatctga gtaagtaacc
    20161 ttaccatcat gttgcgcaat gattgccgca ccagagtcat gggcagcttg gtattccata
    20221 ccagtaccaa cgtaaggtgc ttttggatca atcaatggaa cagcctgacg ttgcatgttg
    20281 gcacccatga gggcacggtt ggagtcatcg ttttccaaga aaggaataca cgctgtcgca
    20341 acggcaacta cctgtttagg agaaacgtcc ataaagtcgg cagaagcagc tgggaattct
    20401 tggttattac cttgatgacg acccattacg atctcgtcaa caaagcgatt gttttcatca
    20461 agtggtgaag tagattgggc tacgatgtaa gcatcttctt catccgcagt caaccaaaca
    20521 atttcatttg taacagtacc agttgcacgg tcaattttac ggtaaggtgt ttggatgaaa
    20581 ccgtacttgt tgaggtgacc ataagatgac aagttattga tcaaaccgat gtttggtccc
    20641 tcaggtgttt caatcggaca catacgacca tagtgggtgt agtgaacgtc tcgaacctca
    20701 taaccagcac ggtcacgagt caaaccgcca ggtcccaagg ctgacaaacg gcgtttgtga
    20761 gataactcag aaagtgggtt gtgttggtcc atgaactgtg acaactgaga tgaaccaaag
    20821 aattctttta ttgcggctgt aacaggacgg atattgatga tttgttgtgg agttaagact
    20881 tcattgtctt gcacgctcat acgctcacgc aagttacgct ccatgcgagt caaaccgata
    20941 cgaacttggt tagcaagcaa ttcaccgaca gcacgaatac gacggttacc caagtggtca
    21001 atatcatcta cgcgacccaa accttcagca aggttgagga agtaagacat ctcagtcaag
    21061 atatccgctg gagtcactgt acgaacattt tcagctggat ttgcattacc gataactgtt
    21121 acaacacggt ctggatcagt tggcgcaaca atcttgaatt tttgcaagag aactggctca
    21181 actaccaccg ctgcatcgtt tggaatgtac tcaacttggt tgagctcatc aaattgattt
    21241 tcgattgatt ccaaaacatc acgactcaat acagtaccag cttccaagac gatttcacct
    21301 gtctcaccgt taatcacatg ctcagcaagt gtttggttga gcaaacgagt acggaggttg
    21361 agttttttat taatcttata acgaccaaca ggtgctaagt cataacgacg tgggtcaaag
    21421 aaacgagctg tcaaaaggct acgagagctt tcagctgtct ttggctcacc tggacgaagg
    21481 cgctcataga tttccttaag cgcttcatcc gtacgagaat ctgctgggtt tttatgaata
    21541 tctttttcaa tggtattgcg aaccaattcg ctatcgccaa agatgtcaaa gatttcatca
    21601 tcgcctgaga aaccaagcgc acgaacaagc gttgtgaacg gaatcttacg cgtacggtca
    21661 atacgagtgt aggcaatgtc ttttgaatct gtttccaatt ccaaccaagc tccacggtta
    21721 gggataacag tcgaaccgta gccaacctta ccgtttttat ccaccttatc gttgaaataa
    21781 acacctggtg aacgaaccaa ctgagaaacg atgatacgct ctgcaccgtt gatgatgaag
    21841 gtacccattt cagtcatgat tggaaactca ccgaagaaga cttcttgtgt cttgatctcg
    21901 ccggtttctt tattcaccag acggaaagtt acataaattg gagctgagta gttcgcatca
    21961 tgcgcacgcg cctcttccaa tgtgtattta ggctctttca attcataacc aacgaattcc
    22021 aattccatgg tatccgtaaa gtttgaaact ggaagtacat cttcaaagac ttctttcaaa
    22081 ccgtaatcta aaaagtcttg gaaagagtcc gtttgaattt caatcaaatt tggtaaatca
    22141 agaacttcct tgattcttga aaaactacga cgggtacggt gcttaccgta ctgaacttca
    22201 tgtcctgcca aaagttttct cctttgtaat aagatactaa gccgtaaaca actcaaagaa
    22261 aaataggaaa cacgacgacg gaggcaagcc tcctaggagc tgtttatctt ttttcacaga
    22321 gttgtaggcg agttcaatta aaagatacga gaccgtgaaa accaaagtga aaataagcgg
    22381 taagtccaaa atctttgatt ttgttgacgc accctcgtca gaacgactag gactttcttg
    22441 acaaatcgtc gaagaaaggc cagacgttta cgacgttggg agtgacaaac caaagtaaat
    22501 atttcataca ctttttcaca aaggttttag gtcgagttca attatataca gccatgtgat
    22561 gaccaacatt catccttttt ctgaattttt agaatcttta agaataggta acaattctca
    22621 aaaaaattcc tcatagacac aaaaagagca gctaaatctt cctttgaaaa agtttgattt
    22681 aactgctgca agccttgttt ggacaatatt tcaaacaaga cacacgacaa ataatttaca
    22741 ctattatagc acaagtacta ggaaaaatca aggtgaatca ttattcgctt gctcactagt
    22801 tgctgtttgc gtttctgatg actgggtcgt gttattagct gaagaagccg tgctactccg
    22861 agtcgaactg cttcgttggg ttgagctact tgatgttggc gtttgggaac cgataattgt
    22921 attccaagcc tgtgctcggt cactatctgt ccccccaacc atgaagttat agctcgttac
    22981 tggtgcacca tttttagccc aataactagt tgtcatcgca ccaccaactg ttacttggcg
    23041 cccatttacc tgtgtcgtcc ctgcacgttg acctgtagaa gcaacgacac tagaagcaat
    23101 aacactactg tctaattcaa attttcctgc gaacatatcc gcattaacat tgtaaagcgc
    23161 atcaaccata tgggccacat attgtgaatt attgtggtag cctgtccaga catacatttc
    23221 tgagttatca tcattcccag cccaggtacc taaagttact ctaggggttg atagcatgag
    23281 ccacacgtca ttaacttcat tacttgtccc cgtcttaccg acgaaatcag atgatgctgc
    23341 ctgtgggttt aaaccactca atcgactctt gaacgtcgta gtataaccag agttgacaac
    23401 ctgtctcaaa agctggttca taatacttgc agttgcttta gaatagactt gaaccggagc
    23461 cgctttatgc tgatacacta ctgttccatc agaagcagta atgctttcaa caatgtaatg
    23521 tttgttataa acgccaccat ttgccaaagt ttgataggca ttggtatttg tcaatactga
    23581 aatttcaaca ccaccgccca acggtacact ttcaatattg tacataggaa tatgataatt
    23641 cattttatcc atgtacgctt tggcatctac acctgcattt ctcatcatct tataggtcca
    23701 aaaagcagga atgttaacag aacggtcaat agccgtctgt aagttcatca taccagtacc
    23761 acgtcctgaa ccatacataa tcggttgtcc acttgaaaag ttcgttggat aatctgaaag
    23821 gatgctggca gaacctatca aaccttgatc aatcgcaata ccgtaagcta acagaggctt
    23881 gatggttgac gctggcgaac gaagggtatc aaaggcatgg ttattttggt tggttgcata
    23941 gtcgcgacca cccacaaatc ctaaaatggc ccctgtggca ttatcaatta acacactacc
    24001 tgtctcgaca tattcgtttc catcatccaa aacagatcca tagtttgcca caacagactg
    24061 catcgccgca tagatttttt gatcaacggt actcttaatc gtgtagccac cttggctcaa
    24121 ttcttgcttg gccaactcct cataggatgc ctttgtttca tcatttttca agtcattttt
    24181 agaaaccttg tcacgtttca ccaggtaatc aaacataacc tcttgcgctt cttccatgac
    24241 cttgtaatag agataatctt tcgtatccgc cattacagga gctggagcaa taaaatcttg
    24301 tttaatatcg taagctttgt aggtttcgta ttcttccttg gtcaagaatg acgcccgata
    24361 catattaaag agaacatctt gatagcgttc aataccgtaa accatatcct catctgattt
    24421 acgtgttcca tctgatgcat agggagaata aacaattgga ctttgcggta aacctgcaat
    24481 aaaagcagcc tgcggaacag tcaagtcttt cgctggttta ccaaaaattc cctgagccgc
    24541 agcttctacc cctgcaatat ttcgtccctg attatttcga ccaaatggag aaacatttag
    24601 gtaaatggtc aaaatctctt ccttggtcat attccgctct aatgccaaag ccgaaacaat
    24661 ctcattagcc ttacgcgtaa aggttggagc atctccgaca agttgctgtt ttatcaattg
    24721 ctgcgtcaag gttgaaccac cacttgatga acctagacca actgatccca gtgccgcacg
    24781 caaaactgcc ttgggcacga ccccattatg ggtttcaaat gtttcatcct ctgtcgcaat
    24841 tacagcctgt tttagataat tcgagacctc ttccgaagta ataggtacac gaagcagatc
    24901 tgaattcact tccgacacca agctaccatc cgaataggta acggtggaaa tccgactaac
    24961 ttctgaaacc ttcgctacca gttcctctgt tttgggaatc ttaacgtcat caaaaagact
    25021 aaccacgaaa ccaattccta tacccgcacc aaaaagaccg aataggaaca ccaagacagc
    25081 tactgaattg aataataatt tcagcgtccg aaggaaaact cctactacat cccctaagcc
    25141 tagggcactg attttctttt taaaatcttg cttatctgat ttagtcgcca tattaactcc
    25201 ttatcgttcc attataccaa attttgttta ttttccgcaa tttcgtggta taatagggag
    25261 gaatttttta aaatgaagtt cggtccaaaa atcatataaa atggtttatg gtcctgtata
    25321 ttaaacctaa aggagacagc ccacatgaat atttttgaag aactaaaagc tcgtggcttg
    25381 gtctttcaaa cgacagacga agaagccttg gtaaaagcat tgacagaagg acaggtttct
    25441 tattacacag gatacgatcc aacagcagat agtttacact tggggcactt ggttgctatc
    25501 ttaactagcc gtcgtttgca gttggcaggc cacaagcctt acgccctagt tggcggtgca
    25561 actggtctga ttggcgaccc ttccttcaag gatgcggagc gtagcttgca aaccaaagat
    25621 accgtggacg gttgggtgac aaaaattcaa ggtcaactct ctcgcttctt ggattttgaa
    25681 aatggtgaca acaaggctga aatggtcaac aactacgact ggttctcaga catcagcttt
    25741 atcgacttcc ttcgtgatgt tggtaaatac tacacggtca actacatgat gagcaaagac
    25801 tctgtgaaaa aacggattga aacagggatt tcctacaccg agtttgccta ccaaatcatg
    25861 cagggctatg acttctacga gctcaatgac aagcacaatg tgaccctaca aatcggtggt
    25921 tctgaccagt ggggcaatat gactgcaggt accgagttgc ttcgccgcaa ggctgacaag
    25981 tctggtcacg tgatgactgt tcccctcatc accgactcta ctggtaagaa gtttggtaag
    26041 tcagaaggca acgctgtttg gttggatgcc gacaagactt ctccgtatga aatgtaccaa
    26101 ttctggctca atgtcatgga cgacgatgcc gttcgtttct tgaaaatctt tactttcttg
    26161 tcattagatg agatcgctga aatcgagaaa caatttgacg ctgcccgtca tgaacgcctg
    26221 gctcagaaga ttttggctag ggaagtcgtg acattggtcc acggtgaaga agcctataac
    26281 caagccctta acatcaccga gcaattgttc gcaggcaata tcaaaaacct atccgcaaaa
    26341 gaactcaaac agggcctcag caacgttcca aactacgctg tacaggctga agacaacctt
    26401 aacatcgttg aactcctagt cacctctggt attgtcaact caaaacgcca agctcgtgaa
    26461 gatgtgcaaa atggtgccat ttatgtcaac ggtgagcgtg tgcaggactt ggactatacc
    26521 ctttctgaca gtgacaagat tgacggcgag ctgaccgtta tccgtcgtgg taagaaaaaa
    26581 tattcagttt tgacttatta agcgatgaaa aataccaagc aaaatcctaa aaatcaagaa
    26641 tttttgaacg actactttga acaaatggct caggaagcca gtcttttgca tcccgagtta
    26701 gagcatttgt ctgccgatga acatcaagca tttttggacc aactctatcg tgaggatgag
    26761 acacgtcgtg ccaaacgcct gaaggaacat ctagaggtgt tctccgacgc agtgattggg
    26821 gttatcatca ccatgatgtt gctggaaatt cctttaccaa gcgacactgt tgatacacat
    26881 cactttttca ctggcatcct catcttcttt gtatcctttt tcatcgtggc ggatttttgg
    26941 tatgacaacc acaagattct gggacagatt gagcacgcaa ccagcaaaat cttaattgtt
    27001 caattcaact ttatggcaac gctggccctc attcccctct ttactcggtg gatgatggaa
    27061 ggcataacca ctacggctgt tgttggttat ggggtcgtga ccattgcagt caatctctgt
    27121 caatccattt tgaattactt tgtcctacaa gaaaagtttg ccggaacaac atatacaaag
    27181 cggtttgttt ccatggcaca cttacggcaa ttggtgaccg tcgccctttt caacatcgtc
    27241 attatcctat ttgcttactt taatccgaca cttgcctttt atttctacat tttacgacca
    27301 atcgtatctt tcctaggagc agccttcttc gaaaagaaac ggcaggagcg gaaagaaaaa
    27361 atggcagtta gagtaaatca catataattc ccaaggaaat cctatatgat ttccttttct
    27421 gctaacctag gagaaaagac atgacctgca ttttttgcca ccaactcgaa gaagaagata
    27481 ttatctacca gacggagcat ttcaaggtag tctgggacat tgaccctgtc caaactggac
    27541 atctactgat tatcagcaag aaacactatg acacacttag ccaaatctct cccattattc
    27601 gctatgagct gtcagacttg gaagtcttct tgactgataa actctgtcaa gcattggcga
    27661 ttgacggtgt gaccatagcc tgcaacgatc gcttgtttga tgctgacacc catttccacc
    27721 tacacctcat tccgcggttt caatcagacg gcttctggga ccaaatttca cttgcacaag
    27781 tgcaactaga cctgaacgcc tttctcaaag cattataaaa agcagcccaa cggctgcttt
    27841 ttcgcttata tagtcgttta gtttactttt agtacaaggc aacgagccgc aggcataact
    27901 caatgctttc ttgtttctag gcattgactt gaagcagtcc cccaaactgt ttcaatcagg
    27961 caaggcgagt tcaaacactc cagtggagtg tttgaagttg gaaataagga aacgacgttt
    28021 tctcgctcgt cgaagtaata aaagagaaac
//
LOCUS       DASFQD010000015        27875 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.015, whole genome shotgun sequence.
ACCESSION   DASFQD010000015 DASFQD010000000
VERSION     DASFQD010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 27875)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27875)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27875
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.015"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(20..709)
                     /locus_tag="U1021_000503"
     CDS             complement(20..709)
                     /locus_tag="U1021_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4711087.1"
                     /translation="MNRLGNVKDWNVVKNWKFLLVGLAVVALNVLTQMAMFTLPNFDG
                     NNILIAAALLLLAVVLGLILTGKLGLWKGEQKWGMGANVGFVALAFIVMFGLKIIGGQ
                     LIMLEEGYGQTTANQEIINNSGLPTLVLFLFTVFFAPVLEELLFRGILMGKVFGKDSI
                     VGLLLSSFLFGFIHNPTNIGSWVVYGGMGLVLGLAYRISGKYTNALVLHSLNNLLGFL
                     LMLLMQSLGLI"
     gene            complement(735..920)
                     /locus_tag="U1021_000504"
     CDS             complement(735..920)
                     /locus_tag="U1021_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711088.1"
                     /translation="MKVFMKIYLVLLIGLGMYAVDYTFGEWLATGQIDLSTLNILLPM
                     VLGLPALLLIEKESNEN"
     gene            complement(940..1449)
                     /locus_tag="U1021_000505"
     CDS             complement(940..1449)
                     /locus_tag="U1021_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3278 domain-containing protein"
                     /protein_id="HEM4711089.1"
                     /translation="MKKENLHIRAIRYFYDIVGELDEASYATLTNFGNNMYMLFMTVT
                     LVSFLVSFALGEDVMGISLFLTLVYSQFKQDAIIKQLGLDKLFVAKADVKLARKKMMK
                     RTLFQTLQIAVYSLLVSIGIWQFHIPQESGTSAAEYFQFVTPMTVVFLTLVGFLSFYI
                     VNRKKIKLI"
     gene            complement(1480..2238)
                     /locus_tag="U1021_000506"
     CDS             complement(1480..2238)
                     /locus_tag="U1021_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3169 family protein"
                     /protein_id="HEM4711090.1"
                     /translation="MKQGKQISTKQRWMRYSAYMLISAILGGFIGFFGVLIFKFNPPS
                     YLNLDNFLICLRIVTFVIFAGTVYLGLKANQSYKLYHSISDEDEERVDELYKKMYRNL
                     EYATISFNVAVSLTLLNLVLGFGVTFLEDSAVMYGSIFDLVFYIILLVSQVFIIKLTQ
                     KIREYKLSAFATVKEMKDFAEAMDEGEKQANYEMSFQIVFTLNQIVLPGLYLFLFVLS
                     MLLQERQITAFLVVAFLHIYINVMQVRMIRRYFK"
     gene            complement(2235..2450)
                     /locus_tag="U1021_000507"
     CDS             complement(2235..2450)
                     /locus_tag="U1021_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4711091.1"
                     /translation="MEYVLKNRLKELRARDSLNQTELAKLAEVSRQTISLIERGEYTP
                     SVVIAMRIAQIFNENVENVFQLVEVGE"
     gene            complement(2463..3029)
                     /locus_tag="U1021_000508"
     CDS             complement(2463..3029)
                     /locus_tag="U1021_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HEM4711092.1"
                     /translation="MEAKKKLFEVNIMENKKFVWGLNILAVVLIFPFAFVFGMIGSLL
                     IANGSQYSELVMSEVWLLFPFYILLIVVHEAIHGIFFKVFCPENPVKYGFKWKSGMAY
                     ATSPGSLYNRMQMLVISLAPFVVISLGLTMLAGFGMMNTTLYFMLATMHAASCAGDFY
                     YAYLLLVKFAKENIAVEDTETGLIIYQA"
     gene            complement(3175..3372)
                     /locus_tag="U1021_000509"
     CDS             complement(3175..3372)
                     /locus_tag="U1021_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711093.1"
                     /translation="MKQPFMITGTTVARAVEIGSILLLAYILLSDLLGWSDMDTALLT
                     TLIASITCIEASLQMEKKGNK"
     gene            complement(3571..4119)
                     /locus_tag="U1021_000510"
     CDS             complement(3571..4119)
                     /locus_tag="U1021_000510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4014 domain-containing protein"
                     /protein_id="HEM4711094.1"
                     /translation="MILVFYFLLQVMNILFICLIISYQIWNYLLIIPLYLILRFINYE
                     ICRLLGYYALDEMGRFGYGTKEVLYPRFRKIEQVYRKKYNQRSRKHQLIYYAGFVMIY
                     SVSFPFLIIVAMFVTEAVKSMIGENSGEVIIGVFIMSILLLVTLVYGKLQSYKRNYAK
                     WFNLEIIMWEHGHPVFREKKRE"
     gene            complement(4178..6796)
                     /gene="alaS"
                     /locus_tag="U1021_000511"
     CDS             complement(4178..6796)
                     /gene="alaS"
                     /locus_tag="U1021_000511"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000661542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEM4711095.1"
                     /translation="MKNLSSAQIRQMWLDFWKSKGHSVEPSANLVPVNDPTLLWINSG
                     VATLKKYFDGSVIPDNPRITNAQKSIRTNDIENVGKTARHHTMFEMLGNFSIGDYFRD
                     EAIEWGFELLTSPEWFAFPKDKLYMTYYPDDVDSYNRWIALGVEPSHLIPLEDNFWEI
                     GAGPSGPDTEIFFDRGTDFDPENIGLRLLEEDIENDRYIEIWNIVLSQFNADPAVPRS
                     EYKELPNKNIDTGAGLERLAAIFQGAKTNFETDLFLPIIREVEKISGKTYDQDGDNMS
                     FKVIADHIRALSFAIGDGALPGNEGRGYVLRRLLRRASMHGQRLGITEPFLYKLVETV
                     GNIMESYYPEVLEKRAFIEKIVKSEEESFARTIHTGSQFAEQLMDKLAAEGKSEIDGR
                     DIFKLYDTYGFQVELTEELAEHRGMTLDIAGFEAAMKEQQDRARASVVKGGSMGMQNE
                     TLAAITEESTFVYGQTALEASLSVIVADNARTEAVSEGQALLVFDQTPFYAEMGGQVA
                     DHGFVKNAAGDIVATVIDVQKAPNGQPLHTVELSASISVGQTYTLEIETKRRKGVEKN
                     HTATHLLHAALHNIIGEHATQAGSLNEQDFLRFDFTHFEAVTAEELRRIEEEVNEQIW
                     NAIPVVTVETDIDTAKEMGAMALFGEKYGKEVRVVTIGDYSVELCGGTHVSNTAEIGI
                     FKILKEEGIGSGTRRIVAVTGREAFLAYRDQEDALKEVAVTIKSPQIKEVPNKVESLA
                     QQVRDLQKENAALKEKAAAAAAGDVFKDVKEANGVRYIASQVQVSDAGALRTFADNWK
                     QKDYSDVLVLVAAIGDKVNVLVASKSSDVHAGNLIKVLAPIVAGRGGGKPDMAMAGGS
                     DASAIQTLLNSVAENL"
     gene            complement(7187..7672)
                     /locus_tag="U1021_000512"
     CDS             complement(7187..7672)
                     /locus_tag="U1021_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LURP-one-related family protein"
                     /protein_id="HEM4711096.1"
                     /translation="MKQFQVKQRFTFGGEKFDIRDSFGDLAYQVEGSFLEIPKRFIVT
                     NSRGGEVCQITKKFLTFLPQFTIDMAEGHSFYLQKEFTFFKDRYTVENLGLILDGNIW
                     DLDFRLKRPDGMLVAEISKELFHLPSHYSVTVLEDSYADLVISLVVAIDYIEMMEDAS
                     T"
     gene            complement(7937..8938)
                     /gene="prsA"
                     /locus_tag="U1021_000513"
     CDS             complement(7937..8938)
                     /gene="prsA"
                     /locus_tag="U1021_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PrsA"
                     /protein_id="HEM4711097.1"
                     /translation="MKQTKKILAGAVTLFAAVTLAACSNAADKDIITMKGNTITVSEF
                     YEKVKTNSQAQQVLLSMVISNVFENQYGDKVSAEEVNKEYDKKAEQLGASFNAALSSA
                     GLTEESYKEQIRTNKLVEYAVKQAAEKELTDENYKAAYDAYTPEVTARVIKLADEAKA
                     KEVLAAAQAEGADFAQLAKDNSTDTTTKDNGGEVKFDSTSTTVPEEVQKAVFALDAGQ
                     VGASVISSVDMKTYTTSYYVVKLDAKSEKSAKWEDYKDKLKEIILAQKQRDSSFVATV
                     LKEALQKANVKVKDSAFQNLLSQYVTTEESSSSSTKSSSSSTESSSSTTESSSSSGQ"
     gene            complement(8999..9718)
                     /locus_tag="U1021_000514"
     CDS             complement(8999..9718)
                     /locus_tag="U1021_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HEM4711098.1"
                     /translation="MVETYSKNANHNMRRPVVKEEIVDFMRTRQAQNTGFLKELEEFA
                     HQENIPVIPHETVAYFRLLMQTLQPKCILEVGTAIGFSALLMADNSPHSKITTIDRNE
                     EMIGFAKENFAKYDQRQQIELLEGEAMDILPTLPDDAYDFVFMDSAKSKYIVFLPEVL
                     KKVKVGGLIILDDIFQGGDVAKGIKDVRRGQRTIYKGLQRLFDATLDNPDVTASLVSM
                     SDGLLMLRKNVENVDLKHIEI"
     gene            complement(9793..10341)
                     /locus_tag="U1021_000515"
     CDS             complement(9793..10341)
                     /locus_tag="U1021_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711099.1"
                     /translation="MLTEEQLQDIFELADLMSNGDRELFLQLREVVFASDPHEILNFM
                     ERILDSESFDDFLDRVGESEKENLWLILIKLLEHLNYICVRDYKDNLEDFIYFFDCLQ
                     QVRNAGISLKLDSGGLSPIASISEWARVIDNKYLDENFCLGAVDMDTDSYYLFFSKQA
                     TFIRLQELAGNLGYRIDYAKNM"
     gene            complement(10357..10797)
                     /locus_tag="U1021_000516"
     CDS             complement(10357..10797)
                     /locus_tag="U1021_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711100.1"
                     /translation="MISYKRSIVIPSVISLVLILLGLGGLTKQEPSMGSVVYLIFLQV
                     LLVYLYILRKQKAVFILTKQYLEFQEHFWSERQRHSLEEIAEIRYIVSPVYRGYQSKR
                     LRIVGNKGGLFAVVSLNRLDGADFNDIYHFVEQVAPHIRWDFSN"
     gene            complement(10799..12601)
                     /gene="pepF"
                     /locus_tag="U1021_000517"
     CDS             complement(10799..12601)
                     /gene="pepF"
                     /locus_tag="U1021_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HEM4711101.1"
                     /translation="MSKQRYEIEEKYQWDLTTIFPTDEAWEAELADLQAETEKTKEFA
                     GHLLDSAKSLLTISETQLGLMRRIEKLYVYASMKNDQDTREGKYQEFQAKAMGLYAAF
                     SQAFAFYEPEFMAITEEKLEAFKVEEPALVQYSHQFEKLLAAKDHVLSQEVEEVLAAT
                     SEIFESPAETFSVLDNASLRFPEIADEDGHLVPLSHGNYIHFMESKNRDVRQEAYEAM
                     YGTYEQFQHTYAKTLQSNVKVNNLKARLRKYDSARHASLAANFIPESVYDTLVAAVNK
                     HLPLLHRYINLRKKLLGIDDLKMYDMYTPLSDFSTKISYEDALKKCQETLEIFGEDYS
                     AIVKEAFENRWIDVHVNEGKRSGAYSGGAYDTNAFMLLNWQDNLDNMYTLIHETGHSL
                     HSMLTRKTQPYVYGHYSLFLAEIASTTNENLLTEKLLAEVEDDKERFAILNHYLDGFR
                     GTVFRQTQFAEFEQAIYKADQEGQVLTADFLNELYGQTNEKYYGLSAEENPEIQFEWA
                     RIPHFYYNFYVYQYATGFAAASALANKIVNGSPEDKENYLNYLKAGSSDYSLNVIAKA
                     GVDMTKEDYLNDAFKVFEARLEELEALVEKGVHL"
     gene            complement(12831..13772)
                     /locus_tag="U1021_000518"
     CDS             complement(12831..13772)
                     /locus_tag="U1021_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein CoiA"
                     /protein_id="HEM4711102.1"
                     /translation="MLVALDEDGQVFNVLENPAPQGRYSCPGCGGLVRYKSGKVLRSH
                     FAHVTLRDCHYFSENESAQHLSLKSCLYSWLINAEQVELEKCLPSIGQVADLFVNDRL
                     ALEVQCSSLPISRLQLRTQAYHEAGLQVLWLLGKGLWIKERLSKLHKQFLSFSMNMGF
                     HLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLDILRLPFAKQALSHLTC
                     PLDRDLPRYIAQQLYYKSPNWLALQAESYSRGENLLTRTAEEWYPHIRLPRSAIGFAQ
                     IQKDLTLVYQDFDQYYGNIEDKQKQVLYPPIIYRKPM"
     gene            complement(13833..15836)
                     /gene="metG"
                     /locus_tag="U1021_000519"
     CDS             complement(13833..15836)
                     /gene="metG"
                     /locus_tag="U1021_000519"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019313364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEM4711103.1"
                     /translation="MTKTPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHDV
                     YYLTGLDEHGQKIEEKAKEAGLTPQAYVDGMAVGVKELWNLLDISYDKFIRTTDDYHE
                     EVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEFFTESQLEEVFRDENGKVTGGIAPSGH
                     EVAWVSEESYFLRLSKYQDKLVEFFNAHPDFIQPDGRLNEIMKNFIEPGLEDLAVSRT
                     SFTWGVPVPSNPKHVVYVWIDALLNYATALGYGQEETANYDTFWNGTVYHMVGKDILR
                     FHSIYWPIMLMMLDMKLPDRLVAHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRY
                     YLMRSLPVGSDGTFTPEDYVGRINYELANDLGNLLNRTVAMINKYFGGQVPTFVANVT
                     DFDADLAAVVADNLASYHKYMEAVDYPRALEAVWNIISRTNKYIDETAPWVLAKEEAD
                     RDKLAAVMAHLTAGLRVVAHLIQPFMMTTSNAIMEQLGLGTAFDLENLDFAGLPAGLT
                     VVAKGTPIFPRLDMEEEIAYIQAQMGGSSTISREEEKEWNPADVELKNEKAAIKFEDF
                     DKVEIRVAEVKEVAKVEGSDKLLQFRLDAGDGQDRQILSGIAKYYPNEQELVGKKVQI
                     VANLKPRKMMGLLSQGMILSAEHGDNLTLLTVDPSVPNGSQIG"
     gene            15993..16586
                     /locus_tag="U1021_000520"
     CDS             15993..16586
                     /locus_tag="U1021_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1361 domain-containing protein"
                     /protein_id="HEM4711104.1"
                     /translation="MFTKKNILTHLFFLIIAVGLKRYDVTAPDLTWNMFLALVALDFA
                     ILTNHTKSHILKVIAGLLWLFFYPNTFYMVTDIVHMHFANTVLWQRESMILFMLYVPS
                     IFFGVMAGVESVRLIFSAFSIKSYWLKLFMISGLSLLSSFAIHIGRYARLNSWDIFTR
                     PTVVIDEMLAVISWDAFPFILGFTFIQIMVLVFSINE"
     gene            16886..17923
                     /locus_tag="U1021_000521"
     CDS             16886..17923
                     /locus_tag="U1021_000521"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEM4711105.1"
                     /translation="MKEGDLLFTPISEKIDINQVREHSKLSPETLAKKQARDRELEAI
                     LKGEDDRLLLVIGPCSSDNEEAVLDYAHRLAKLQEEVKDKIFMVMRVYTAKPRTNGDG
                     YKGLMHQPDTDAAPSLINGIKAVRNLHYRIITETGLTTADEMLYPENLPLVDDLVSYI
                     AIGARSVENQQHRFVASGIDVPTGLKNPTSGNLKVMFNGLFAAQKKQSFLFNNTEVET
                     SGNPLAHVILRGAVNENGKYLPNYYYDNLLETIELYDQFGLKNPFIIIDTNHDNSGKN
                     YLEQIRIIRQTLINRDWNESIRNYVRGFMIESYIEDGRQDNPDVYGKSITDPCLGWEK
                     THELIREIYNR"
     gene            17933..18958
                     /locus_tag="U1021_000522"
     CDS             17933..18958
                     /locus_tag="U1021_000522"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018364383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEM4711106.1"
                     /translation="MGIHKRSTSLDIDKVKELSKLEGEFLAAKNQRDEELKRIIRGED
                     DRLLLVIGPCSSDNEEAVLEYARRLSKLQEEVKDKIFMVMRVYTAKPRTNGEGYKGLV
                     HQPDTSKLPDLINGIAAVRNLHYRVITETGLTTADEMLYSANYPLVEDLVSYHAIGAR
                     SVEDQEHRFVASGVDMPTGMKNPTSGNLTVMFNGIYAAQNKQNFIYRDAEVDTDGNPL
                     AHAILRGANTEKGGYEPNYYYDILLKTIKQYEQFGLKNPFIVIDTNHDNSGKNYLEQI
                     RIVRQTLINRDWNEAIRKYVRGFMIESYLEDGRQDSPEVFGKSITDPCLGWEKTEALI
                     REIHQTV"
     gene            19004..19867
                     /locus_tag="U1021_000523"
                     /pseudo
     CDS             19004..19867
                     /locus_tag="U1021_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735696.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
     gene            19887..20954
                     /locus_tag="U1021_000524"
     CDS             19887..20954
                     /locus_tag="U1021_000524"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEM4711107.1"
                     /translation="MKLTVNLPNTPYDILIQRGSLAQTGAWVKELWKPQKIAIITDDH
                     VGSLYAETVQSSLEAAGFESIVFAFPEGEASKNLDTVNQAYEFLVQHGMTRSDGIIAL
                     GGGVVGDLAGFVSSTYMRGIHFLQIPTSLTAQVDSSIGGKTGVNTPFAKNMIGTFCQP
                     DGVLIDPDTLKTLGKRELIEGMGEVVKYGLIDDLELWEKLEHLDGSVESILEHADYII
                     YHSCEVKRKVVVEDELDNGVRLYLNFGHTIGHAIEATAGYGQVMHGEAVAIGMVQISR
                     AAEKKGLMPAGMTEKIIAMCEKFGLPTTHQPWNVDELYAALSHDKKARGKTIKLVIVP
                     QLGQAAIHQIPMEEMLEFLQV"
     gene            complement(21159..21959)
                     /locus_tag="U1021_000525"
     CDS             complement(21159..21959)
                     /locus_tag="U1021_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM4711108.1"
                     /translation="MSTILSIQNIHKTFEAGTVNENHVLRGLNLDVKEGDFISIIGGN
                     GAGKSTFMNSLAGALTVDSGDILLEGKSIKHVSAAKRSKDISRVFQDPKMGTASRLTI
                     EENMAIAYRRGLSRGLGWGVKDSERAIFKEALKELGLGLENRMKVDTQFLSGGQRQAL
                     TLMMASLVKPKVLLLDEHTAALDPKTSDMVMELTKKIVESHQLTALTITHNMENAIEY
                     GNRLVMLHRGQIVVDVEGEEKKNLTVQNLMDLFYKNSGEKLTDDEMIL"
     gene            complement(21969..22862)
                     /locus_tag="U1021_000526"
     CDS             complement(21969..22862)
                     /locus_tag="U1021_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4711109.1"
                     /translation="MDIILSSISQGLLWSVMAIGVYLTFRILDIADMTAEGSYPLGAA
                     VCATGIVNGVNPLLATFMAMVAGMGAGLISGLLHTKLKIPALLTGIVTLTGLYSINLK
                     ILGKANVALLKQETLVTQLQDFGLTKTNAVLVIGLFFVLAVVGLLTLLLNTQIGLAIR
                     STGDNIPMSEANGINVDNMKIYGYMLSNGLIALCGALLTQNNGYADLNSGTGTIVIGL
                     ASVIIAEVILRNLRLGWRLLSVVLGAVVYRLIILAILEIPGMDADLVKLFSAILLATV
                     LYVPELQKKLNIRRPKLNGNA"
     gene            complement(22917..23891)
                     /locus_tag="U1021_000527"
     CDS             complement(22917..23891)
                     /locus_tag="U1021_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4711110.1"
                     /translation="MYYKLVKKLATISVASMGLLTLAACSSSSEQASSDVVKVGVLQY
                     MEHESLTAAREGFVAELEANGYKEGEKLVLDYQNAQGDQANLQTISEQLIDGNDIVLA
                     IATPSTQSLATVSTETPIVFTAVTDPLSADLVESIEKPGGLLTGTSDQAPIDKQVELL
                     GQAVPDAKTVGILYTTSERNSEVQVEQAKELLEKAGYKVVVKGITSSNEVQDATTSLM
                     KDVDALFIPTDNTVASTMTMIGELSVEHKVPVIGGSTDMVDEGGLLTYGTNYEALGRQ
                     TAKMAIKIIEGANVSETAVEYPETVSLHVNEEMAQKLGIDTSKLAVSE"
     gene            complement(23915..24874)
                     /locus_tag="U1021_000528"
     CDS             complement(23915..24874)
                     /locus_tag="U1021_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4711111.1"
                     /translation="MGFKKIILSSVALLSAVTLATCSSNSSDSSSVNVGIIQYAEHEA
                     LSSAREGFVEALGEAGYKEGENLTIDLQNAQGDQANLQTMVEKLAGKNDLNFAIATPA
                     AQAMLNADSETSSVFTAVTDPVEAGLVESLEKPGGTMTGSTDATDVEGQIEMLLKVVP
                     TAKIVGIFYNSSEVNSEVQAEQAKKALEAKGVKVEVTTVTTTNDVQQAITSLAGKVDA
                     IYLPTDNTVASTASTIGDILKEAKVPAMGSDAAVIDAALFTYGVDYHAIGVQAGELAV
                     KILKGEKPADLAVEKPNTAAITVNEEMAKAVGIDAATIKALEE"
     gene            complement(25601..26602)
                     /gene="lacD"
                     /locus_tag="U1021_000529"
     CDS             complement(25601..26602)
                     /gene="lacD"
                     /locus_tag="U1021_000529"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase"
                     /protein_id="HEM4711112.1"
                     /translation="MTKLQLSQAKFNHMTRLSNSDQVIAALAIDQRGALKRLLAAAAG
                     SGEFGDDILIDFKKVISSDLTPYASSILLDAEYGVPASELRHADCGFIAAYEKTGYDA
                     STPGRLPDLLPNWSAKRIKELGADAVKILLYYDVDDKPEINDIKHAWVERIGSECIAE
                     DIPYFVEILTYDASDMDVTSREYAALKPHKVNGAMREFSKSRYNADVLKVEVPVNMNF
                     VEGYTDEEPVYTVEEAKAFFKEQTDSTHLPFIYLSAGVSAKLFQETLVFAKEAGSSFN
                     GVLCGRATWKDAVAIFASEGEETAKAWLADQGRRNVEELNEVLATTARPWTEKVEVK"
     gene            complement(26626..27771)
                     /gene="nagA"
                     /locus_tag="U1021_000530"
     CDS             complement(26626..27771)
                     /gene="nagA"
                     /locus_tag="U1021_000530"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HEM4711113.1"
                     /translation="MTVFIKAKSIILPESEVESAYLEITDKGQFGRIVTEKPEGEIVD
                     YSDFHLAPGLVDTHIHGYASHDVMDNDFEGIKVISEGLLSCGVTSWLPTTLTDTTENL
                     DAVCETIGTYAGQETGAKIQGIFLEGPFFTEKYKGAQNPKYMSDPSIEKLDNWHSLSK
                     GLVNKIAIALEREGVKEFIEFANSKAIHTALAHSDATYAQAEAAVEAGANIFVHVYNG
                     MSGLHHREPGMVGAALNLKNVYAEMICDGHHVHPAAAEIVVKARGAEETVLITDCMRA
                     GGMGEGESRLGEFEVVVKDGTARLKESGSLAGSILELIEAVQNVVKWGLVSLPDALRM
                     ASLAPARSVNIDHICGRIAEGGAADFIVVDDAGRLQATYLDGVKRFG"
BASE COUNT         8247 a         6314 c         5229 g         8085 t
ORIGIN      
        1 atagttccat cctatcctcc tatatcaagc ccagactttg catcagtagc atcaacaaaa
       61 atccgagaag attattcaga ctgtgtagaa caagtgcatt ggtatatttg ccagaaatac
      121 gataggcgag tcccaggacc aggcccatac ctccgtagac aacccaagat ccgatattgg
      181 tcggattgtg aataaatcca aacagaaaac tcgatagcaa taatcccaca atcgaatcct
      241 taccaaagac tttccccata agaatccctc tgaaaagcag ttcctccaaa actggagcaa
      301 agaaaactgt aaagagaaac aaaactaagg ttggcaagcc tgaattattg atgatttcct
      361 gattggcagt cgtttgacca tatccctctt ccagcataat caattgccca ccaattattt
      421 tcaaaccaaa cataacgata aaggcgaggg ctacaaaacc aacattcgcc cccatccccc
      481 acttctgctc acctttccac agacctaatt taccagtcaa gataagacca agcaccacgg
      541 ctaacaacaa aagggctgca gcaatcaata tgttattccc atcaaaattt ggtagggtaa
      601 acatagccat ctgggtcaat acattaaggg caacgacagc tagtcccact aagagaaact
      661 tccaattttt aaccacattc caatctttga catttccaag tctattcata gcaatctcct
      721 tcacatacac taagtcagtt ttcattactt tctttttcga tcaatagcag agcaggcaag
      781 cccaaaacca tcggcaagag gatattcagg gttgacaaat caatctgccc agtagccagc
      841 cactctccga aagtatagtc aactgcgtac ataccaaggc cgattaatag gacaagataa
      901 attttcataa acactttcat gagttgacct ccatctaaac taaataagtt tgattttctt
      961 acggttaaca atatagaaac taaggaatcc aactagtgtc agaaagacaa ctgtcatggg
     1021 agtgacaaat tggaaatact ccgctgcaga tgttccactt tcctgtggaa tatggaactg
     1081 ccagatacca atactaacta gcagactgta gacagcaatc tgtagagttt gaaacagagt
     1141 tcgtttcatc attttcttcc gagccaattt cacatcagcc tttgcaacaa acaatttatc
     1201 cagacccaac tgtttgataa tggcgtcctg tttgaattga gaataaacca acgtcaaaaa
     1261 gagactgatt cccatgacat cctctcccag cgcaaagcta actaggaagc tcaccagtgt
     1321 cactgtcata aagagcatat acatattgtt gccgaaattg gtcaaggtcg cataagacgc
     1381 ctcgtctaac tcaccaacaa tatcatagaa ataacgaatt gctcgaatgt gtagattttc
     1441 ctttttcata gctatcacct aaaactcttt caaaaatcct tatttaaaat aacgacggat
     1501 catgcgaacc tgcatgacat tgatgtaaat gtgaagaaag gcaacaacta gaaaggctgt
     1561 aatttgtcgc tcctgcaata gcatgctaag cacaaatagg aatagataca aacctggtaa
     1621 cacgatttga ttcaaagtga agacgatttg gaaactcatt tcgtagtttg cttgtttctc
     1681 accttcgtcc atcgcctcag caaagtcctt catttctttt accgtagcaa aagcagaaag
     1741 cttatattca cgaattttct gagttaattt aataataaat acttgagaaa caagaagtat
     1801 gatatagaaa actaagtcaa aaatcgatcc atacatgacc gcactgtctt ctaagaaggt
     1861 aacaccaaat cctagaacca aatttaacag agtcaatgat acggcaacat taaatgatat
     1921 ggtcgcgtat tctaggttac gatacatttt cttatatagt tcatcaacac gttcttcatc
     1981 ctcatctgaa atggaatgat aaagtttata cgattgattg gccttaagcc caagatatac
     2041 agtcccagcg aaaattacaa acgtaacgat acgtaaacaa attagaaagt tatctaaatt
     2101 gagataagaa ggtgggttga atttaaagat taatactcca aagaaaccga taaaaccacc
     2161 caaaattgct gaaatcagca tatacgctga atatctcatc catctttgtt tcgttgaaat
     2221 ttgtttcccc tgtttcattc tcctacctcc actaattgaa aaacattctc cacattttca
     2281 ttaaaaattt gagcaattcg catggcaatg accaccgagg gcgtatattc tcctcgctca
     2341 atcaagctaa tagtctgccg tgatacttct gctaactttg ccaactctgt ctggttgagg
     2401 ctatcccgtg ccctcaactc cttgagccga ttttttaaga catattccat gagttttcct
     2461 ttctaggctt ggtagataat caagcctgtt tctgtgtctt caacagctat attttccttg
     2521 gcaaacttga ccaataagag ataggcatag tagaaatcgc ctgcacaaga ggccgcatgc
     2581 atggttgcca gcataaagta aagagtggta ttcatcatcc caaatcctgc taacatggtc
     2641 aagcccaaac taatcacaac aaagggagcc aagctgatta ctagcatttg catccgattg
     2701 tagagcgaac ctggactggt cgcataggcc atacccgatt tccatttaaa cccgtatttg
     2761 acaggatttt caggacaaaa aactttgaag aagatgccgt ggatagcctc atgcacaact
     2821 attaaaagaa tatagaaagg gaaaagcaac catacctccg acatgaccag ttccgagtat
     2881 tgcgaaccgt tagctatcaa caaacttcct atcattccaa atacgaaggc aaatggaaag
     2941 atgagcacca cagcaagaat attcaatccc cacacaaact tcttattttc catgatattg
     3001 acttcaaata atttcttttt cgcttccatg tttcctctcc ttcatttgcc tacaagctag
     3061 actaaactat atagtcctag accaactcca atcagtaagc cgaaaataat tgctcctgta
     3121 atcataatcg ctgccctatc tgctgaaatg tatcgtttca tggtctatct ccttctactt
     3181 atttcctttt ttctccattt gtaaacttgc ttcaatacaa gtaattgaag caattagagt
     3241 agtcagtaga gctgtgtcca tatcgctcca tcccagcaaa tcagaaagga gaatgtaagc
     3301 caataataga attgacccta tttcgactgc acgcgcaaca gttgttcctg taatcataaa
     3361 aggttgtttc atttggtgac tccttctcta ttcatcgtat cagactaatc cttttgattt
     3421 ttatcttgat attattgtaa cacttccttt tctttttgac aactatcttt gtcgaaaaaa
     3481 caacaatttt tgtcaaaaag tttatgaagt ttgtcaaaat gtagcaaata ttagtcagga
     3541 tagccaaaat tcattaaaaa agaagcaaga ttactctcgc ttcttttctc taaagactgg
     3601 atgtccatgt tcccacatga taatctctaa attaaaccac ttagcataat ttcttttata
     3661 actttgtagc ttgccataca ccagagtaac taaaagaaga atgctcatga taaatactcc
     3721 tatgattact tcccctgaat tctcaccaat catcgatttg accgcctcag taacaaacat
     3781 tgcgacgata atcagaaaag gaaaactaac cgaataaatc ataacaaaac ccgcgtagta
     3841 aattagctgg tgctttctgc ttcgctgatt gtatttcttc ctatagactt gctctatctt
     3901 tctaaaacgt ggatagagga cttcctttgt accgtatcca aagcgcccca tttcatccaa
     3961 ggcataatat cctaacaggc ggcaaatttc ataatttatg aaccgtaaga tgagatagag
     4021 aggaataatt aatagataat tccatatctg ataggatatt attagacaga taaacagtat
     4081 gttcatgact tgcagaagaa aataaaaaac taaaatcatg tttttattat accaaaaact
     4141 cttctaccca atggataaaa gagtttttca gtatagatta taagttttca gcaacgctgt
     4201 tcaagagggt ttggatagca gaagcatcgc taccacctgc catggccatg tctggcttac
     4261 caccaccacg acctgctacg attggcgcaa ggactttgat gaggttacct gcatgaacat
     4321 cgcttgactt gcttgccaca aggacattga ccttgtcgcc gatggccgca accaacacca
     4381 agacatcaga gtagtctttc tgcttccagt tgtcagcgaa ggtacggagg gcacctgcgt
     4441 ctgaaacttg gacctggcta gcaatgtagc gaacaccatt tgcctcttta acatctttga
     4501 agacatctcc agcagctgct gccgctgctt tttctttcag agctgcattt tctttttgca
     4561 ggtcacgaac ttgttgtgca agactttcaa ccttgtttgg cacttccttg atctgtggtg
     4621 acttgatggt taccgctact tctttaaggg catcttcttg gtcacggtag gcaaggaagg
     4681 cttcacggcc tgttaccgca acgatacggc gagtacctga accgatacct tcttctttca
     4741 aaatcttgaa gataccgatt tcagcggtgt tgctaacatg ggtaccacca cagagctcca
     4801 cagagtagtc accgatagta acaacgcgga cttctttacc gtatttttca ccgaagaggg
     4861 ccatggcacc catttccttg gctgtgtcaa tatctgtctc aactgtcaca actggaatgg
     4921 cattccaaat ttgctcattg acttcttctt caatacgacg aagttcttcc gcagtaactg
     4981 cctcaaaatg cgtaaagtca aagcggagga agtcttgctc gttcaaggaa ccagcctgtg
     5041 ttgcatgctc gccgataata ttgtgaagag ctgcatggag caagtgagtt gctgtgtggt
     5101 tcttctcaac acccttacgg cgttttgttt cgatttcaag tgtgtaggtt tgaccaactg
     5161 aaatacttgc ggacagttct acggtgtgca atggctgacc attcggtgct ttctgcacat
     5221 cgatgacagt cgcaacaatg tctccagcag catttttcac aaaaccatgg tctgcaacct
     5281 gaccacccat ttctgcatag aatggtgttt ggtcaaagac aaggagggct tgaccttctg
     5341 agactgcttc tgtacgcgca ttatcagcca caatgacaga taagcttgct tcaagagctg
     5401 tttggccgta aacaaaggtc gactcttctg tgatagcagc cagggtttca ttttgcatac
     5461 ccattgaacc acctttgaca actgaggcac gggcacggtc ttgttgctct ttcatagccg
     5521 cttcaaaacc agcaatatca agggtcatac cacggtgctc agccaattct tctgtcaatt
     5581 ctacttggaa accataggta tcatagagtt tgaaaatgtc gcgaccatca atctcagact
     5641 taccttctgc tgctaatttg tccatcaatt gctcagcaaa ttgtgaacct gtatggatag
     5701 tacgagcaaa tgactcttct tcactcttaa caatcttctc aatgaaggca cgtttttcaa
     5761 gtacttctgg atagtagctt tccataatat tgccaactgt ctccaccaat ttgtacaaga
     5821 atggctccgt aatgcctaaa cgttggccat gcatagaagc acgacggaga agacgacgaa
     5881 ggacataacc acggccttca tttccaggaa gggcaccgtc accaatagca aaagaaaggg
     5941 cacggatgtg gtctgcaata accttgaagc tcatgttgtc gccatcttgg tcataggtct
     6001 taccagaaat cttttctact tcacgaatga ttggcaagaa gaggtccgtt tcaaagttgg
     6061 tcttagcccc ttggaaaata gctgccaaac gctccaaacc tgcgcccgta tcgatgtttt
     6121 tgtttggcaa ttccttgtac tcagaacgcg gaacagctgg gtctgcgttg aactgggaca
     6181 atacgatatt ccaaatctcg atgtaacggt cattttcaat atcttcttcc aagagacgga
     6241 gaccaatgtt ttcagggtca aagtcagtac cacggtcgaa gaaaatctcc gtatctggac
     6301 cagaaggacc tgcaccaatt tcccagaagt tatcttcaag cggaatcaag tggcttggct
     6361 caacaccaag agcaatccaa cgattgtatg aatccacatc atcaggatag taagtcatgt
     6421 agagcttgtc ttttggaaaa gcaaaccatt ctgggcttgt caagagctca aacccccact
     6481 caatcgcttc atcacggaaa taatcaccaa tagagaagtt accaagcatt tcaaacatgg
     6541 tgtggtggcg ggctgtctta ccaacattct cgatgtcgtt ggtacggatt gatttttggg
     6601 catttgtaat ccgtgggtta tctggaatga cagagccatc aaagtatttc ttgagggttg
     6661 ccacaccaga gttgatccat aaaagagtag gatcgtttac tgggacaaga tttgctgaag
     6721 gctcaacaga gtgacccttt gatttccaga aatccaacca catttgacga atttgagcag
     6781 aagataaatt tttcataaac taagatacca agagcgttaa gaaagcgaga agaaaatagg
     6841 agaccaacgc tgtgcgccag cgcactaggc ggtctatctt tttttcgacg cttttagctc
     6901 gggttcaatt taacgaaaca gttaaattaa acatttcctt tcatatagta ataattgagg
     6961 ggaaagtccg tagcccgagt tcaactaaga tactaagggc gttaagcgga caccgtcaaa
     7021 ataggaaacc tgacgaagac gcttgcatct aggaagtgtt tctctttttg acaaagtccg
     7081 tagcccgagt tcatttcaga ataaactcga taccctttcc tttcataagt gatagttagg
     7141 cgggttcaat ttaacggacc agttaaactg aatgattatt tcacgattaa gtcgatgcat
     7201 cttccatcat ttcgatgtag tcaattgcga ccactaagga aatgaccaaa tctgcatagg
     7261 agtcctccaa tacagtaacg gagtaatgag aaggtaaatg aaagagttct ttggagattt
     7321 cagctacgag cataccatct ggccttttca agcgaaaatc caaatcccag atatttccgt
     7381 ctaggattaa acctagattt tccacagtat agcgatcctt gaaaaaagta aattcctttt
     7441 gcaagtagaa agaatgaccc tctgccatat caatggtaaa ctggggcagg aaggtcaaaa
     7501 acttcttagt aatctgacaa acttccccac ctctagaatt ggtcacgata aatcgttttg
     7561 gaatttcgag aaaagatccc tccacttgat aagcaagatc cccaaaacta tcacgaatat
     7621 caaatttttc accaccaaag gtaaagcgct gtttcacttg aaattgcttc atgataacct
     7681 ccaaaaaaat aacaagaaat caaacgaagg gcgaaaaacc gcggtaccac cttcattcaa
     7741 tgacttgtca ttctcattta agaaactgta tccacaagca aaaaacttat atatataagc
     7801 cacaaactgt gaatacaggc tctactattc aattgtaata ttaagtagca aaatacttgg
     7861 cttagatggc tcgcaacaac cgccaatttt ctgaactaag gtgtcaagta ccaattctta
     7921 ataagtaaat cgtcaattac tgacctgatg aactagaaga ttctgttgta gaagaagaac
     7981 tttcagtcga cgaagagctg ctcttcgttg aggaagaact gctttcttct gttgtcacat
     8041 actgtgaaag aagattttgg aaagcactat ctttaacctt aacgtttgct ttttggagtg
     8101 cttctttcag cacagtagca acaaatgatg aatctctttg cttttgtgcc aaaataattt
     8161 ctttcagctt atctttataa tcttcccatt tagcagactt ttctgattta gcatccaatt
     8221 ttacaacgta ataactcgtt gtatacgtct tcatatctac cgaagaaatc accgacgctc
     8281 cgacttgacc tgcatccaag gcaaataccg ctttctgtac ctcttctgga acagttgttg
     8341 aagttgaatc gaatttaact tcgcctccat tgtcttttgt agtagtatcc gtggaattgt
     8401 ctttcgccaa ttgagcaaaa tctgcacctt cagcttgtgc agcagctaaa acttcttttg
     8461 ctttagcttc gtctgccaac ttgatgacac gtgctgttac ttcaggtgta taggcgtcat
     8521 aagctgcctt gtagttttca tctgtcaatt ctttctcagc agcttgtttt acagcatact
     8581 caaccaattt attggtacga atttgttcct tataggattc ttctgtcaat cctgccgaag
     8641 aaagtgccgc attaaaagaa gcaccaagtt gttctgcctt cttatcatat tccttattta
     8701 cttcttctgc agagactttg tcaccatact gattttcaaa tacattactg ataaccattg
     8761 acagcaaaac ttgttgagct tgtgagtttg tttttacttt ctcataaaac tcagacacag
     8821 taatcgtgtt acctttcatc gtaatgatat ctttatcagc tgcattggaa caagcagcga
     8881 gtgttactgc agcaaagagt gttactgcac ctgcgagaat ttttttagtt tgtttcatta
     8941 aagactctct ccttttttca ttaacccctt tattataaca caaaagctta aaaacttctt
     9001 aaatttctat atgttttaag tcaacattct ctacattttt cctcaacata aggagaccgt
     9061 cactcatgga aacaagacta gcagtcacat ctggattatc caaagtcgca tcgaataaac
     9121 gttgcaatcc cttataaata gtacgctgcc ctcttctgac atccttgatg cctttggcaa
     9181 catctcctcc ttggaagata tcatccaaaa tgattagacc gcctactttg acctttttca
     9241 agacttctgg taaaaataca atatattttg atttagcaga atccatgaaa acaaaatcgt
     9301 atgcgtcatc tggtaaagtc ggaagaatgt ccatggcttc cccttccagc aattcaatct
     9361 gctggcgctg atcatatttg gcaaagtttt ccttagcaaa tccaatcatt tcttcatttc
     9421 gatcaatcgt cgtaatcttc gagtgcgggc tattgtcagc catcagtaac gcagagaagc
     9481 caatagcagt tccaacttct aaaatacatt taggttggag tgtctgcatc agcaagcgga
     9541 aataagctac cgtttcatga gggataactg gaatgttttc ttgatgagca aactcttcca
     9601 gttctttcaa aaaccctgta ttttgcgcct gacgtgttcg cataaaatcc acaatttctt
     9661 ccttgacaac cgggcggcgc atattgtgat ttgcgttttt actatatgtt tcgaccatag
     9721 aatccattat atcataagcc gacaagattt tcttcctcaa cacactaaaa ggtaggtttc
     9781 cccacctttt ctttacatat ttttggcgta atcaattcga taccctaaat ttccagctag
     9841 ttcttgaagt cgaataaaag tcgcctgctt actgaaaaag agatagtaac tatccgtgtc
     9901 catatctact gcccctagac aaaagttttc atcaagatat ttgttatcaa tgactcttgc
     9961 ccattctgaa atagatgcaa ttggacttaa tccacctgaa tccaatttaa gagaaattcc
    10021 cgcattgcgg acctgctgaa ggcaatcaaa aaagtagata aaatcttcaa gattgtcctt
    10081 ataatcacgc acacaaatat agttcaaatg ctctagtaat tttatcaaga ttaaccaaag
    10141 attttccttt tcagactctc caacacgatc caagaaatca tcgaatgact ctgaatctaa
    10201 aatacgttcc ataaaattga gaatctcgtg tggatcactg gcgaagacta cttctctaag
    10261 ttggagaaat agttccctat caccatttga cattaaatct gctaattcaa aaatatcttg
    10321 tagttgttct tctgttaaca tagtcccctc tctttattaa tttgaaaaat cccatcttat
    10381 atgcggtgct acttgctcta caaaatggta aatatcatta aaatctgcac catcaagcct
    10441 attcaagctg acgactgcaa atagtccccc cttatttcct acaattcgca aacgtttcga
    10501 ctgatagcca cgatagacag gagaaacgat gtatcgaatc tctgcaatct cttctaacga
    10561 atggcgttga cgttcactcc aaaagtgttc ttgaaattct aggtactgtt ttgtcaagat
    10621 aaaaactgcc ttttgctttc tcaatatata taaataaact agcaaaactt gtaaaaatat
    10681 cagatagaca acacttccca tagatggctc ttgcttggtc aaaccaccaa gacccagcaa
    10741 gattaaaaca aggctaatca cactgggaat gacaatcgaa cgtttatagg aaatcatatt
    10801 agaggtgcac acctttctca acgagagctt ctaattcttc caaacgagct tcaaatacct
    10861 tgaaggcatc attgaggtaa tcttccttgg tcatgtctac gccagcctta gcgatgacat
    10921 tgagggaata atctgagcta ccagccttca agtagttgag atagttttct ttgtcttctg
    10981 gactaccatt gacaatcttg tttgctagag ctgatgctgc tgcaaaacct gtcgcatatt
    11041 gatagacata gaaattgtaa tagaaatgtg gaatacgagc ccactcaaac tggatttctg
    11101 gattttcttc ggcagaaagt ccgtagtatt tctcgtttgt ctgaccgtac aattcattga
    11161 ggaaatcagc tgtcaagacc tgaccttcct ggtctgcctt atagatagct tgttcaaact
    11221 cggcaaattg ggtctggcgg aagactgtac cacggaaacc atctaggtaa tgatttagaa
    11281 tagcaaagcg ttccttgtca tcttctactt ctgccaagag tttttcagtc agaaggtttt
    11341 cgttggtagt tgaagcaatt tcagccaaga aaagtgaata atggccatag acatagggtt
    11401 gagtcttacg agtcaacatg gaatgaagag aatgtcctgt ttcatggata agggtgtaca
    11461 tgttatccaa gttatcctgc cagttgagaa gcatgaaggc gttggtgtcg taggcacctc
    11521 ctgagtatgc tcctgagcgt tttccttcat taacatggac atcaatccag cggttttcga
    11581 aggcttcctt cacaatagcc gaataatcct cgccgaagat ttccaaggtt tcttgacatt
    11641 ttttaagagc atcttcataa gaaatcttgg tgctgaaatc tgacaatggt gtgtacatat
    11701 cgtacatctt caagtcatca atccccagga gcttcttacg caaattgatg taacgatgca
    11761 agagcggaag gtgcttgttg actgccgcca ctaatgtatc gtaaacagat tctggaatga
    11821 aattagctgc aagtgatgcg tggcgagctg agtcgtactt ccgtaaacga gctttcaggt
    11881 tattgacttt gacattagac tgaagggtct tagcgtatgt atgctggaac tgctcgtagg
    11941 taccgtacat agcttcgtat gcttcttggc ggacatcacg gtttttagac tccataaagt
    12001 ggatgtagtt tccgtgtgaa agtggcacca agtgaccgtc ttcatctgcg atttctggga
    12061 aacgcaggct agcattgtcc aagactgaga aggtttcagc aggtgattca aaaatctcgc
    12121 tggttgccgc aaggacttct tccacctctt gtgacaggac atggtccttg gctgccagaa
    12181 gtttttcaaa ttggtggctg tactgaacaa gagccggttc ttctacttta aaggcttcca
    12241 atttctcttc agtaatagcc ataaattcag gctcatagaa ggcaaaagcc tgtgaaaagg
    12301 cagcatacaa gcccatggcc ttagcttgaa attcctgata ttttccttcg cgagtatctt
    12361 ggtcgttctt catagacgca tagacataga gtttttcaat gcgacgcata agaccaagtt
    12421 gcgtttcact gattgtcaaa aggctcttcg ctgagtcgag caagtgacct gcaaattctt
    12481 ttgttttttc agtttcagct tgtaaatctg caagttctgc ttcccaagct tcatccgttg
    12541 ggaaaatagt ggtcaaatcc cactggtatt tttcttcaat ttcgtaacgt tgtttagaca
    12601 taattaatcc tccgtatcct ttattctaac ataaaaaatc ccctctttcc aacggaaagt
    12661 gagggattat aggttactat ttcaactgga aaacagtttt tgccattcgc tatcgcaagt
    12721 cgtcactagg ctaacaaagt ctacaacctt caccgacagt agtatgacta acataaaata
    12781 ttgagcatat tttcaaaagt aatatataca cctccatcag ctatctctat ttacattggt
    12841 tttctataaa ttataggtgg atatagaacc tgtttctgct tgtcttcaat attgccgtaa
    12901 tactggtcaa aatcctgata aactagggtt aaatcttttt gtatttgggc aaagccaatg
    12961 gcagagcggg gcagacggat gtggggatac cattcttctg ccgtccttgt cagcaaattc
    13021 tcccctctgc tataagactc tgcctgcagg gctaaccaat tgggggattt gtaataaagc
    13081 tgttgagcaa tgtagcgagg caaatcccta tctaacgggc aagtaagatg cgataaagct
    13141 tgcttggcaa atggcagacg caagatgtcc aataaatttc cctcgccaaa tggaaaaacc
    13201 tttgtcagac agtggacctt acctcgtaag tcttcgtgaa taaggtaacg aagacgcaat
    13261 tccttcttct catcatccaa ttcccagagg tgaaaaccca tgttcatact aaaagagaga
    13321 aattgcttgt gtaatttact taatctttct tttatccata ggccttttcc caacagccag
    13381 agaacctgaa gaccagcttc atgataggct tgcgtcctca gctgcaaacg agaaatgggc
    13441 agactggaac attggacttc caaagctaga cgatcattga caaataaatc agcgacctgc
    13501 cctatactag gcaggcattt ttcaagttca acttgttcgg cattgattaa ccaactgtac
    13561 agacaagact taagtgacag atgctgggct gactcattct cagaaaaata gtggcagtcc
    13621 cgcagggtta catgggcaaa gtgcgaacgc agaacttttc cggatttgta tcggaccagt
    13681 cctccacaac ctggacaaga atagcgacct tgtggcgcag gattttccaa gacattaaaa
    13741 acttgcccat cttcatcaag tgcaactaac ataaaacctc ctttctttat tagttcgcaa
    13801 aaaaacaccc agctgtgctg agtgttgtga atttacccaa tctgactgcc gtttggcaca
    13861 gatggatcga ctgttaagag tgttaaattg tcaccatgtt cggctgatag gatcatgccc
    13921 tgactgagca agcccatcat cttacgtggc ttaaggttgg caacgatttg aactttcttg
    13981 ccgaccaact cttgctcatt tggatagtac ttggcgatac cagacaagat ttggcggtct
    14041 tgtccatcac cagcgtccag acggaattgg agcaacttgt cagaaccctc tactttggct
    14101 acttctttga cttcggctac gcggatttcc accttgtcaa agtcctcgaa cttgatcgca
    14161 gctttttcat ttttgagttc cacgtcagct gggttccact ctttttcttc ctctcgggaa
    14221 atagtagagc taccacccat ttgggcttgg atataggcga tttcctcttc catatccaga
    14281 cgtgggaaga taggcgtgcc ttttgcgact acggtcaaac ctgctggaag acctgcaaag
    14341 tcaagatttt caaggtcaaa tgctgttccc aaaccaagct gttccataat agcattagac
    14401 gtcgtcatca tgaatggctg aatgaggtga gccaccacac gaagacctgc tgttaagtga
    14461 gccatgactg ctgccaactt gtcacggtca gcttcttctt ttgccaagac ccaaggtgca
    14521 gtttcatcga tgtacttgtt ggtacgggag atgatattcc aaacagcttc caaagcgcgt
    14581 ggatagtcaa cagcttccat atacttgtgg tagcttgcca agttgtcagc cactactgcc
    14641 gccaagtccg catcaaaatc tgtcacgttg gcaacaaaag ttggtacctg accaccgaaa
    14701 tacttgttaa tcatagcaac cgtacggttg agcaagtttc caaggtcgtt ggctagttcg
    14761 tagttgatac gaccaacgta gtcttctggt gtgaaggttc cgtcagagcc aactggaaga
    14821 ctacgcatga ggtagtaacg cagtggatcc aagccgaaac gctcgaccag catttctgga
    14881 taaaccacat tgcccttaga cttggacatc ttgccgtcct tcatgacaaa ccagccatga
    14941 gcaaccaagc ggtctggcaa cttcatatcc aacatcatga gcatgattgg ccagtaaatg
    15001 gagtggaagc gaagaatgtc cttgccaacc atgtgataaa ctgttccatt ccagaaggtg
    15061 tcatagttgg ctgtctcttc ctgaccataa cccaaggccg tcgcgtagtt gagcagggca
    15121 tcaatccaga catagacaac atgttttgga ttggacggaa caggcacgcc ccaagtaaat
    15181 gaggtacggg atactgccaa atcttccaag cctggctcga tgaagttttt catgatttca
    15241 ttgagacgac cgtccggctg gataaagtct gggtgagcat tgaagaactc gaccaattta
    15301 tcctgatact tgctgaggcg gaggaagtat gactcttctg atacccaggc aacctcgtga
    15361 ccgctcggag cgataccgcc tgttaccttg ccgttttcat ctcggaagac ctcttctaat
    15421 tggctctcgg tgaaaaattc ctcgtctgat acggagtacc atccagaata ctctcccaag
    15481 taaatgtcgt cttgcgccag caatttttca aaaacagccg ccaccacttc ctcgtggtaa
    15541 tcatcagtcg tgcggataaa tttgtcgtaa gagatgtcca gcaagttcca gagctccttg
    15601 acgccaaccg ccatgccatc tacataagct tgtggagtta atccagcctc ttttgccttc
    15661 tcctcaatct tttgaccgtg ctcatcaaga cctgttaaat aatagacatc atgccccata
    15721 aggcgtttgt aacgagccaa tacatcacag gcaatggtcg tgtaagctga accgatatga
    15781 agttttccag acggataata aatcggtgtg gtgatataaa acggtgtttt tgtcatgctt
    15841 tttttccttt caaattcaga gcaaatgaaa ccctgttatt gacaatactt cattttatca
    15901 tattttcagc taaatcacaa aatggttcta actacaattc ttcctctatc tatgctatac
    15961 tatgatacaa ctcaaacaga aagaggtcat ctatgtttac aaagaaaaat attcttactc
    16021 atctcttttt cctcatcata gcagtcggac taaaacggta cgatgtcaca gcacctgact
    16081 tgacatggaa tatgttcttg gcattggtag cacttgattt tgcaatcctt accaatcata
    16141 caaagtccca tatcctcaaa gtgatagcag gtctcctctg gctctttttc taccccaata
    16201 ctttttacat ggtgacagac atcgtccata tgcactttgc caacacagta ctatggcaac
    16261 gagaaagcat gattctattt atgctttatg ttccaagtat tttctttggg gtcatggctg
    16321 gcgttgaaag tgtacgactt attttctctg ctttttctat caaatcctac tggctaaaac
    16381 tgtttatgat tagtggtctt tccctactat ccagctttgc cattcatatc ggacgatatg
    16441 caagactgaa ttcatgggac atctttacca gaccaactgt cgttattgat gaaatgcttg
    16501 cagttatttc gtgggatgcc ttccccttta tcctcggctt cacctttatc caaattatgg
    16561 ttcttgtctt ttcaataaat gaataagatt tttatctcat agccattatc ttcaagcatc
    16621 ttcctgcact caaggactat cgttcctttt gggaagattt ttcaaggaca taaacaaaat
    16681 tttttgataa atttatatct tccccgtttc tctccattac atttttatcc aaactgtatg
    16741 aggcaaaaat cgttaaccta ttgtaagtaa aacttcttaa atttccttta tataaaatat
    16801 tcagaattta ctgtaaattc tacataaaat catggatatt gattttaaat tcttaaaaat
    16861 aatggtataa ttgaggaacc tataaatgaa agagggagat ctattgttta caccaatcag
    16921 cgaaaaaatt gacatcaatc aagtacgaga acattcaaaa ctttctccag aaacacttgc
    16981 taaaaaacaa gctcgtgacc gtgaacttga agctatctta aaaggtgaag atgatcgtct
    17041 tctcctagta attggaccgt gttcttctga caatgaagag gctgtcttag attatgctca
    17101 ccgcttggcc aaactccaag aagaggtcaa agataaaatt ttcatggtca tgcgcgtcta
    17161 tactgccaag ccacgtacca atggtgatgg ttataaagga ctcatgcacc aaccagatac
    17221 agatgctgca ccaagcctca tcaacggaat caaagcagtt cgtaacctcc actatcgtat
    17281 cattacggaa acaggtttaa ctactgctga cgagatgctc taccctgaaa acctgccttt
    17341 ggttgatgac ttggtttcct acatcgctat cggagctcgt tcggttgaaa atcagcagca
    17401 ccgctttgta gcgtcaggca tcgatgttcc aacaggcttg aaaaatccaa cgtctggtaa
    17461 cctcaaagtc atgttcaacg gtctttttgc tgctcagaag aaacaatcct tcctcttcaa
    17521 caatactgaa gttgaaacat ctggcaatcc acttgctcac gttattcttc gtggcgcagt
    17581 caatgaaaat ggtaaatacc ttccaaacta ttactatgac aatcttctag aaaccattga
    17641 gctctatgac caatttggct tgaaaaatcc atttattatt atcgatacca accatgacaa
    17701 ttctgggaaa aattatttgg aacaaatccg tatcatccgt caaaccttaa tcaaccgtga
    17761 ctggaacgaa tccattcgta actacgttcg cggattcatg attgaatcct acattgaaga
    17821 cggtcgccaa gacaatccag atgtctatgg aaaatccatc acagaccctt gcttaggctg
    17881 ggaaaaaaca catgaactca tccgagaaat ttacaacaga taggaagata ttatgggaat
    17941 tcacaaacgt agcaccagtt tagacatcga taaagtaaag gaactttcca agttagaagg
    18001 agaatttcta gctgcaaaaa atcagcgcga tgaagaactg aaaagaatta tccgaggcga
    18061 agatgaccgt ctgctcttgg ttatcggacc ttgctcatca gataatgagg aggccgttct
    18121 agaatatgca cgtcgtctct ctaagcttca agaggaagtc aaagataaaa tcttcatggt
    18181 catgcgggtt tacacagcta agccacgtac caatggggaa ggctataaag gactggttca
    18241 tcagccagat acttctaaat taccagacct cattaacgga attgcagccg tgcgcaattt
    18301 gcattaccgt gtcattactg agaccggact cacaactgct gatgaaatgc tctactctgc
    18361 caactaccct cttgtggaag acttggtgtc ctaccatgct atcggagcac gttcggttga
    18421 agaccaagaa catagatttg ttgcatcagg tgtcgatatg ccaactggta tgaaaaaccc
    18481 aacttctggt aatttgaccg ttatgttcaa tggtatctac gccgcacaaa acaaacagaa
    18541 ctttatttac cgtgatgcag aagttgatac agatggcaac cctctagctc atgctatcct
    18601 tcgtggtgcc aatactgaaa agggcggtta tgagccaaac tactactatg atattctctt
    18661 gaaaaccatc aaacagtatg aacaatttgg tcttaaaaat ccatttatcg taattgatac
    18721 caaccatgat aattctggta aaaattacct ggaacaaatc cgtatcgtcc ggcaaaccct
    18781 catcaaccgt gattggaatg aagccattcg caaatatgtt cgtggtttca tgattgaatc
    18841 ctacttagaa gacggccgtc aagatagccc tgaggtattc ggcaaatcca ttaccgatcc
    18901 ttgcttaggt tgggaaaaaa cggaagctct gattcgtgaa attcatcaaa ccgtctaatt
    18961 cttcccttaa ttttttatac gataaataat ttggaggtaa gctatgaaca ttgatggtta
    19021 cactcgtctt gctgccgttg ttgcaaagcc aatcaaacac tccatttccc ccttcattca
    19081 taatctggct tttaaggaaa caggtgtaaa tggtgtctat gtcgcttggg aaattcccga
    19141 ggaagatgtg gctgtaacgc ttgaaaatat caaacgatat gatatgtttg gtatcaacct
    19201 gtccatgccc tataagcagg ctgtcatccc ttatctcgat agcctgactg actctgctcg
    19261 cttgattggc gctgtcaata ccgtgattca taaagatgga aaactaatcg gtcacaacac
    19321 cgatggaatt ggatttttca agagtttgga aagactaaaa ggctttcaag ttaagaacaa
    19381 gcgactaacc atcctaggtg gtggtggtgc ttctactgct atcatagctc aggctacatt
    19441 ggatggtgca aaggaaatta ccattttctg ccgtcaacaa agcttggaaa gaacacagac
    19501 gagtcttaca cctattgctc aagcaactgg agttcccata caggtcctag cgcttgaaga
    19561 tagccaatta ctacaggaac atatcaccaa ctccgactta ctagtcaacg gaaccagtgt
    19621 aggcatggat gggtattctc aacctgttcc gtctaccatt cgctttcccg aaaatctttt
    19681 ggttgcggat gtgatttatc aaccattcga aacaccttta atgaagcatg cccagtcaca
    19741 aggcaaccct actattaacg gtttgggcat gctccttttc caagcggctg aagcattcca
    19801 agcctggact ggtaaggaaa tgccgactga cttgatttgg gaccaattag tccagaaata
    19861 cgacatcaat atagagagga aatctgatga aactgaccgt caatcttccc aacactccct
    19921 acgacatcct tatccaaaga ggaagtttag cacagacagg tgcatgggtc aaagaacttt
    19981 ggaaacctca gaaaatcgcc attatcacag atgaccacgt cggctcactc tatgctgaaa
    20041 cagtacagtc tagtctggaa gcggctggat ttgaatccat tgtctttgca tttccagaag
    20101 gcgaagcttc aaaaaatctt gacactgtca atcaagccta cgaatttctc gtacagcatg
    20161 gcatgacccg aagtgacggc attatcgccc tcggcggcgg tgtcgttggt gatttggcag
    20221 gctttgtttc atcaacctac atgcgtggca ttcattttct acaaattcca accagcttga
    20281 cagcccaggt tgattcctct atcggtggaa aaactggcgt caatacccca tttgctaaga
    20341 acatgatagg taccttctgc cagcctgacg gcgtattaat tgaccctgac accctcaaaa
    20401 cccttggcaa acgagaattg atcgaaggaa tgggcgaggt cgtcaaatat ggtctaatcg
    20461 atgaccttga actctgggaa aaattagaac atttagacgg ctctgtcgag agcattctgg
    20521 agcatgctga ctatatcatc taccactcct gtgaagtcaa acgcaaggtt gttgtcgaag
    20581 atgaattaga caacggtgtc agactctacc tcaacttcgg tcacacgatt ggacatgcta
    20641 ttgaagcgac cgctggctac ggccaagtca tgcacggtga agctgttgcc attggtatgg
    20701 tacaaatctc acgcgcagct gagaaaaaag gactgatgcc agcgggtatg acagaaaaga
    20761 ttatcgccat gtgtgaaaaa ttcggcttgc cgactacaca tcagccttgg aatgtagatg
    20821 aattatacgc cgccctatct cacgataaaa aagcacgtgg caagaccatc aaacttgtca
    20881 tcgttcctca attgggacag gctgccatcc atcaaattcc aatggaagaa atgctagaat
    20941 ttctacaagt atagtcattt agttgacttt tacgtcgaag taataaaagt caactaatac
    21001 tcaatgaaaa tcaaaaacag actaggcgac gcagatgcag atagaactga agttcatcaa
    21061 atcaagtcaa caacgtctga ttttgatttt cgaagagtat aaatgacgat ataagaaaaa
    21121 agactactga cttgcatgaa atcagtagtc ttattttttt ataaaatcat ctcatcgtca
    21181 gttagctttt caccgctgtt tttgtagaaa aggtccatca agttttgaac ggtcaggttc
    21241 ttcttctctt ctccttctac atcgacaaca atctgaccac ggtgcaacat gaccaaacga
    21301 tttccatatt caatggcgtt ttccatatta tgcgtaatcg tcagagccgt caactggtga
    21361 ctttccacaa ttttcttggt caattccata accatatcgc tggtttttgg atccagggca
    21421 gcagtatgtt catccaagag cagaactttt ggtttaacca gcgaagccat catcaaggtc
    21481 agagcctgac gttgaccacc tgaaagaaat tgcgtgtcaa ccttcatacg gttttctaat
    21541 cccagaccaa gctctttcaa ggcttcctta aaaatagcac gttcactatc cttcacaccc
    21601 cagccaagac cacgtgacaa tccacgacga taggcaatag ccatgttttc ttcaatagtc
    21661 aatcgagaag ctgttcccat ctttggatct tggaaaacac ggctgatgtc cttagaacgt
    21721 ttggcagctg agacatgctt aatggattta ccttcaagca aaatatcgcc cgaatcaacc
    21781 gtcaaggcac ctgcaagtga gttcatgaaa gttgatttac cagcaccatt accaccgata
    21841 atggaaatga aatcaccttc ttttacatct aggttcaacc cacgaaggac atggttttcg
    21901 ttgaccgttc ctgcttcgaa ggtcttatga atattttgga ttgataaaat tgtagacatg
    21961 acttcctcct aagcatttcc attcaatttt ggacgacgaa tattcaattt cttctgcaat
    22021 tctggcacat agagaacggt tgccagaagg atagctgaga agagtttaac aaggtctgca
    22081 tccatacctg gaatttccaa aatcgctaag ataatcaaac ggtaaacaac cgcaccgaga
    22141 acaaccgata ggagtctcca acccaagcgt aagttacgca agataacttc tgcaatgatg
    22201 acagatgcta gaccgataac aatggtacca gtacctgagt tgagatctgc atagccatta
    22261 ttctgagtaa gaagagcacc acaaagggca attagaccat tcgacaacat ataaccgtag
    22321 attttcatat tgtctacatt gataccattg gcctcactca ttggaatatt atcccctgtt
    22381 gaacgaatag ccagaccaat ttgagtattc aacaagagag taagcagacc tacaactgct
    22441 agtacaaaga aaagaccaat aaccaagact gcatttgttt ttgtcaaacc gaaatcctgc
    22501 aattgggtca ctagagtttc ttgcttaagc agagccacat tggctttgcc taagattttc
    22561 aagttgatag agtagagacc tgtcaaggtt acaataccgg tcaaaagggc tggaattttt
    22621 agttttgtat gaagtaaacc agaaatcaat cctgcaccca taccagctac catagccata
    22681 aaggttgcca gcaagggatt cactccgttc acaatccctg tcgcacaaac agcagctcca
    22741 agcggataag atccctcagc tgtcatatca gcaatatcta aaatacgaaa cgtcaagtaa
    22801 acaccaatcg ccataactga ccaaagcaaa ccttgcgaga tacttgataa aataatatcc
    22861 acgattttct cctttttcta aattcgtagt caatactagg ttctatctta ccgatcttat
    22921 tcagatacag caagcttaga agtatcgata cctaatttct gagccatttc ttcattaacg
    22981 tgaagactga cggtctctgg gtattctact gctgtttctg acacattggc tccttcgata
    23041 atcttaatag ccatttttgc agtttgacga cctaaagctt catagttggt accgtaagtc
    23101 aaaagacctc cttcatccac catgtccgtt gaaccaccga ttactggaac cttatgctcc
    23161 acagataatt caccgatcat ggtcatggtt gaagcgacag tattgtctgt tggaataaag
    23221 agagcatcta catccttcat caagctagtt gtcgcatctt ggacttcatt tgaagatgtg
    23281 attcctttta ctactacctt ataacctgct ttttctagca attccttagc ttgctctacc
    23341 tggacttctg aattccgttc gctagtagta tacaaaatac caactgtctt agcatcagga
    23401 acagcttgtc ctagcaattc aacttgtttg tcaattggag cttggtcaga tgtacctgtc
    23461 aaaagtccac ctggtttttc aatggattct accaagtcag ctgacaaggg atctgtaacc
    23521 gcagtaaaga caatcggcgt ttcagtagac acagtcgcta aactctgggt agacggcgta
    23581 gcgattgcca agacaatatc atttccatcg attaattgtt ctgaaatggt ttgaaggtta
    23641 gcttgatcgc cttgggcatt ttgataatcc aaaaccaatt tttcaccctc tttataacca
    23701 tttgcttcta attccgccac aaaaccctca cgggcagctg tcaatgattc atgctccata
    23761 tattggagaa ctccaacttt gaccacatct gaggaagctt gttctgatga tgaggaacaa
    23821 gctgcaagtg ttagcaaacc catacttgct actgaaatag ttgccaattt ttttactagc
    23881 ttataataca taaacgtttc ttctcctaaa tattttactc ttctaatgct tttatagtcg
    23941 ctgcatcaat accaacagct ttagccattt cttcattgac ggtaatagcc gctgtatttg
    24001 gtttttcaac tgctaagtca gctggctttt cacccttcaa aatcttcaca gccaattcac
    24061 cagcttgaac accgatagca tggtagtcga caccgtaggt aaatagagct gcgtcaataa
    24121 ctgccgcgtc acttcccata gctggaactt ttgcttcttt taaaatatca ccgattgttg
    24181 aagctgtaga ggcaactgta ttatcagttg gaagatagat agcatcgact tttcctgcaa
    24241 gtgaagtaat agcttgctga acatcgtttg tcgtcgtaac tgttgtcact tctactttta
    24301 caccttttgc ttcgagtgcc tttttagcct gctcagcttg aacttctgag tttacctcgc
    24361 tagaattgta gaaaataccg acaatcttcg cagttggtac aactttgagc aacatctcga
    24421 tttgaccttc cacatcagtt gcatcagtcg atccggtcat tgtcccacct ggtttttcca
    24481 atgattcaac caaacctgct tcaactggat ctgtgacagc tgtgaataca cttgatgttt
    24541 cactatctgc attaagcatg gcttgggctg ccggtgttgc gatggcaaag ttaagatcat
    24601 tttttcctgc caatttctca accattgtct gtaagtttgc ttgatcacct tgggcatttt
    24661 gcaaatcaat cgtcagattt tcaccttcct tgtagcctgc ttctccgagc gcctctacaa
    24721 agccttcacg agctgagctc aacgcttcat gttcagcata ttgaataata ccaacattga
    24781 ctgaactcga atctgacgaa ttggaactgc atgtagcaag cgttactgct gacaaaagtg
    24841 ctactgaact aagtataatt tttttaaatc ccatgattat tctcctttta taaatataat
    24901 agcaaacaag aaaggaccgc ttagactaca ctctaaacgg tccttatatt tcatctgtat
    24961 aggaaaacag aatgaattat ccgtgccatt tagatgtatc atctatgagg cacatgtcaa
    25021 aatagctaca gccacataga tacaaacttt acgttcccgt gtttgcatcc atgtttacca
    25081 tgtctacaaa cactatctaa aatagccgta gaaataagta tgattagctg aatgattttg
    25141 acacatttgt aacatctctg tttccctttc tcatttattt gtaactatca taactgtttt
    25201 caaattattt gtcaatagga aattgtgtaa attttcagat ttttcaagtt ttttcgaatt
    25261 tttctaaaaa taggccccta tattattagc tataaaacga cctgtcatca tgtttatata
    25321 gccttttagt ttacttttag tacttgctcc aactatttca caaataatca gaggttggaa
    25381 ataaggggaa caaggtttgc gtcaacaacc gcagctataa ctcaaggctt tcttgtttct
    25441 gggattgctt gcacagtaaa tggactgttc aaggtgagag atataagagc ggattgcaaa
    25501 accaggtcaa catcgactga ttttgatttt cgaagagtat aaatgactat atttgatgta
    25561 acaaaaagtc tgaacctaag cccagaccct actaaaacaa ttattttact tctacttttt
    25621 cagtccaagg acgcgctgta gttgctagaa cctcatttag ttcttctacg ttgcggcggc
    25681 cttgatccgc caaccaagct ttggctgttt cttcaccctc gcttgcaaag atggctactg
    25741 catccttcca agtcgcccga ccacaaagaa caccattaaa gcttgaacca gcttctttgg
    25801 caaagacaag ggtttcttgg aaaagtttag cagatacgcc agcgctcaaa taaatgaatg
    25861 gcaagtgagt gctgtctgtt tgttccttga agaaggcctt agcttcctca actgtataga
    25921 ctggctcttc atctgtgtag ccttctacaa agttcatatt gacaggcact tcaaccttga
    25981 gcacgtcggc attataacgt gacttactaa attcacgcat ggcaccattg accttgtgcg
    26041 gtttgagggc tgcgtattca cgagaagtca catccatatc gctggcatca taagtcaaga
    26101 tttcgacgaa gtaaggaata tcttctgcga tacactcact accaatgcgt tctacccaag
    26161 catgcttaat gtcgttgatt tctggcttgt catctacatc atagtaaagc aagattttta
    26221 cggcatccgc ccccaattct ttgatacgtt tggctgacca attgggcaaa aggtctggca
    26281 aacgacctgg tgtagacgca tcgtaacctg ttttttcata agctgcaatg aaaccgcaat
    26341 ctgcatggcg caattctgaa gccggaacac catactcagc atccaagaga atggagcttg
    26401 cataaggagt caaatcgctt gagatgactt tcttgaagtc aatcaaaatg tcatcaccaa
    26461 attcaccact acctgctgca gcagcaagca ggcgtttcaa tgcaccacgt tggtcaatcg
    26521 ccaaggccgc aatcacctga tcgctgtttg acaagcgggt catgtgattg aatttagcct
    26581 gagaaagttg taattttgtc attagtttcc tcctaaggaa ttttattaac caaatcgttt
    26641 cacgccatct agataggtcg cttgtaagcg tcctgcatca tctacgacga taaagtctgc
    26701 agctccgcct tctgcaatcc gaccacaaat atggtcaata ttgacagagc gagctggtgc
    26761 cagagaggcc atacgaaggg catcaggtag ggataccaag ccccatttca caacattctg
    26821 cactgcttca atcaattcta agatagaacc tgccaaacta ccgctttctt ttaaacgagc
    26881 agttccatct tttacaacaa cttcaaattc accgaggcgg gactcccctt cacccatacc
    26941 gccagctcgc atacagtccg taatcaaaac agtttcctca gctccacgtg ctttgaccac
    27001 gatttctgcc gcagctggat gaacatggtg tccatcacaa atcatttccg catagacatt
    27061 ttttaaattc aaagcagcac cgaccatacc tggttcacgg tgatgaagcc cactcatccc
    27121 attgtaaaca tggacgaaga tattggcacc agcttctact gccgcttccg cttgcgcata
    27181 ggtcgcatcg ctgtgagcca aggcagtatg aattgccttg ctgttagcaa actcgatgaa
    27241 ttctttgacg ccttcacgtt ctagagcaat agcaatttta ttgactaaac ctttagataa
    27301 gctgtgccag ttgtccaact tttcaatgga cggatcgctc atgtacttag gattttgtgc
    27361 tcccttgtat ttttctgtaa agaagggacc ttctaagaaa ataccttgaa tcttggcgcc
    27421 tgtttcctgc cctgcataag tcccaatcgt ttcacaaact gcatctaaat tttcagtcgt
    27481 atccgttaag gtcgttggaa gccaagaggt taccccacaa gacaagagac cttctgaaat
    27541 taccttgatc ccttcaaaat cattgtccat aacatcgtga gaagcgtagc cgtggatatg
    27601 tgtatcaact agccctggtg ctaaatgaaa gtcagaataa tcaacaatct ccccttcagg
    27661 cttttcagtc acaatccgtc caaactgacc cttgtcagta atttccaaat aggctgattc
    27721 gacctcactc tctggtaaaa taatagattt tgcttttata aatactgtca tattatctcc
    27781 tttattgata tatatactta tcaaactggt tataaccata tactaaatat attgtagaac
    27841 ttctattaga aaatgtcaag taattaccat aactt
//
LOCUS       DASFQD010000016        25070 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.016, whole genome shotgun sequence.
ACCESSION   DASFQD010000016 DASFQD010000000
VERSION     DASFQD010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 25070)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25070)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25070
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.016"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            20..499
                     /locus_tag="U1021_000531"
                     /pseudo
     CDS             20..499
                     /locus_tag="U1021_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921768.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
     gene            536..1105
                     /locus_tag="U1021_000532"
     CDS             536..1105
                     /locus_tag="U1021_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4711114.1"
                     /translation="MSIKYPDGSIDLILPAEIVKQADTTAPAITDDAKGNIVVAPTKE
                     AVEFVVTYVDNNGKAQLVVVTKGADGKWTTTAKAVIVDPVTGQVIIPGSAIKPGTVVT
                     AYSKDMAGNVSDLNSAEVEAVDANNPAAGVKVKSVTSTSNANKSTKKAKQLPNTGEKA
                     TSATSLGLAVLGMGLALFAAKRKKDEEEA"
     gene            1300..2436
                     /locus_tag="U1021_000533"
     CDS             1300..2436
                     /locus_tag="U1021_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEM4711115.1"
                     /translation="MKKRPTSAYIHIPFCTQICYYCDFSKVFIKNQPVDEYLAALMEE
                     VKFYDLPALRTLYIGGGTPSALSADQLDYLLTNLEDLLDLSQVEEFTIEANPGDLTAD
                     KIAVLKKSKCNRVSLGVQTFDDRMLKKIGRSHNQAQIYETIAALKEAGFHNISIDLIY
                     ALPGQTMEQVVDNVAKALELDIPHMSLYSLILENHTVFMNRQRRGNLHLPNEDVESDM
                     FDYILQELEKNGFEHYEISNFTKPGFESRHNLMYWDNSEYYGLGAGASGYIDGMRYRN
                     RGPIQHYLKSIREKGHSRLHEEFLSKTEQMEEEMFLGLRKKTGVSIERFEEKFGISFE
                     DRYGQVVRDLKNEGLLQEEDRWLRMTKKGLFLGDTVAERFIITD"
     gene            2452..3192
                     /locus_tag="U1021_000534"
     CDS             2452..3192
                     /locus_tag="U1021_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[acyl-carrier-protein] thioesterase"
                     /protein_id="HEM4711116.1"
                     /translation="MGLTYQEAFTILFDMVDVKQEIKLPDFISYCLGVSGRQSEELGR
                     SDLYIFQEFGLIWVVTDYELTIQSLPKYNETITIKTEAVAYNKFFCHRMFYIYDEAGN
                     LLLDILCYFVLIDFESRKVAPVPEALIAPYQSEQVKKLPRAPKYQLLENPSVQEFPVR
                     YFDLDMNGHVNNGKYLEWMYEALGYDCLLCHVPKKIQLKYLKEVEATSLVSSRRVSNA
                     CVSQHEIVVDGHIHAQAVIEWRERHGAG"
     gene            3179..3788
                     /locus_tag="U1021_000535"
                     /pseudo
     CDS             3179..3788
                     /locus_tag="U1021_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647054.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
     gene            3798..4571
                     /locus_tag="U1021_000536"
     CDS             3798..4571
                     /locus_tag="U1021_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01457 family HAD-type hydrolase"
                     /protein_id="HEM4711117.1"
                     /translation="MTYTGYLIDLDGTIYEGKKRIPAGERFIHRLQERNIPYLFVTNN
                     TTRRPEMVQAMLAENFNIETPLETIYTASLATVDYMNDLGKEKTVYVIGEDGLKSAIF
                     EAGYVEDTENPAYVVVGLDTQLTYEKLTIATLAIQKGATFIGTNPDLNIPTERGHLPG
                     AGSLIALLKAATRVQPTFIGKPEAIIMDKALEILGTERSQTVMVGDNYLTDIRAGIDN
                     GFPTLLVLTGFTKPEEVADLPLAPTHVLNSLDEWSFDEN"
     gene            4561..5190
                     /locus_tag="U1021_000537"
     CDS             4561..5190
                     /locus_tag="U1021_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002263554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01906 family membrane protein"
                     /protein_id="HEM4711118.1"
                     /translation="MRTKLQIIGTILFVLSAAVLGTIYLAWLVYPIEISYLGLEKVVY
                     MKSSDISYNFNILMTYLTNPFASVLDMPNFSSSADGLKHFADVKHLFHLTQGIFLISL
                     PAVFYFWKEVVRKGYGKLYQAVFLWMAAVPLFIAVLGLLIGFDSFFTLFHQVLFPGDS
                     TWLFNSNTDPVIYILPAEFFLHCFLLFFVLYEIICGAWLLLLRKKWKKS"
     gene            5271..5447
                     /locus_tag="U1021_000538"
     CDS             5271..5447
                     /locus_tag="U1021_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000048061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEM4711119.1"
                     /translation="MSKTVVRKNESLDDALRRFKRAVTKAGTLQETRKREFYEKPSVK
                     RKRKSEAARKRKKF"
     gene            5552..6565
                     /gene="galE"
                     /locus_tag="U1021_000539"
     CDS             5552..6565
                     /gene="galE"
                     /locus_tag="U1021_000539"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEM4711120.1"
                     /translation="MSILVTGGAGYIGSHTVVGLLKLGKEVVIVDNLSNSSILVLDRI
                     ETITGKRPTFYELDVADKEALRQVFENENIEAAIHFAGYKAVGESVAKPIMYYENNIM
                     STLALVEVMAEFGVKKIVFSSSATVYGLNNPSPLVETMPTSATNPYGYTKVMLEQILR
                     DVEVADKEWSIALLRYFNPIGAHESGLIGEDPAGIPNNLMPFIAQVAVGKRPELSVFG
                     NDYDTVDGTGVRDYIHVIDLALGHIKALEKISTTAGVHTYNLGSGQGTSVLELVQAFE
                     KVNGVPVPYKIVDRRPGDVATCYANADKALEELDWKTEKTIEDMCRDTWNWQSKNPNG
                     YEG"
     gene            complement(6639..6998)
                     /gene="mscL"
                     /locus_tag="U1021_000540"
     CDS             complement(6639..6998)
                     /gene="mscL"
                     /locus_tag="U1021_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HEM4711121.1"
                     /translation="MLKELKNFLFRGNIVDLAVAVVIGGAFGAIITSFVDDIITPLIL
                     NPALKAANVQNIADLSWNGVKYGSFLSAVINFLIIGTSMFFVVKAAEKAMPKKVEEPA
                     GPTQEELLAEIRDLLKK"
     gene            7180..8970
                     /gene="dnaG"
                     /locus_tag="U1021_000541"
     CDS             7180..8970
                     /gene="dnaG"
                     /locus_tag="U1021_000541"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEM4711122.1"
                     /translation="MLSKDKITEIKQALNIVDVIGETVALTKAGRNYVGLCPFHGEKT
                     PSFNVIEDKQFYHCFGCGKSGDVFKFVEEVRGVSFADAAAILAEKAGFQVDVTPSYHQ
                     EEKKVSPHQVLYDIHRDAAKFYHALLMTTKMGEEARAYLHQRGLTDDVIKTFQLGLAP
                     AEQNILYQKLSGQYDEESLLNSGLFNPSENNIIYDAFQARIIFPLADEYGRIVAFSGR
                     IWTEEDRNNKQLAKYKNSRSTAIFNKSYELYHLDKAKAVIKKQRETYLMEGFLDVIAA
                     HRVGIDNAVASMGTALTREHVAHLAKFCKKIVLTYDGDKAGQAATMKALDELQDFQVE
                     IVSLPDNMDPDEFLQKNSEEALQQVLTKSRISDVEFLIQYLKPENPDNLQMQIEFVDK
                     IAPIIAKVSSITAQNSYIYKVADLLSDFDYNQVEQAVNAVRLNQRQERTQQVFQSQTG
                     QSYLPPVQTIARITSLIRTENHLLYRMVEHPYILNEFRLREDFYFATPELQAIYDMLK
                     KSGEITSFELSQLNDSAQQAWYRMQEERLPNEVSPHEIEELEIRRDKELLKKENQHLA
                     RKIREHSHVGNADIALDELQKLLDKRRQME"
     gene            8973..10091
                     /gene="rpoD"
                     /locus_tag="U1021_000542"
     CDS             8973..10091
                     /gene="rpoD"
                     /locus_tag="U1021_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEM4711123.1"
                     /translation="MTNKKDKKTEVTTFDVQVAEFIRNHKKQGSATDDEINDQLVIPF
                     TLDADGIDDLLQRIQDAGISIVDKEGNPSARAMQVEEEPGLSDEELLGSTSAKVNDPV
                     RMYLKEIGVVPLLTNEEEQELALAVEAGDPEAKQRLAEANLRLVVSIAKRYVGRGMQF
                     LDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVET
                     INKLVREQRNLLQELGQDPTPEQIAERMDMTPEKVREILKIAQEPVSLETPIGEEDDS
                     HLGDFIEDEVIENPVDYTTRVVLREQLDEVLDTLTDREENVLRLRFGLDDGKMRTLED
                     VGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED"
     gene            10325..10648
                     /locus_tag="U1021_000543"
     CDS             10325..10648
                     /locus_tag="U1021_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HEM4711124.1"
                     /translation="MTYTEDQIKDIQERIFHALEDVIDPELGIDIINLGLIYEIRFIE
                     GKAEIDMTLTTMGCPLADLITDQIHDVLKDVPEVTEVDVRLVWSPAWTVQKMSRYARI
                     ALGIK"
     gene            10830..10987
                     /locus_tag="U1021_000544"
                     /pseudo
     CDS             10830..10987
                     /locus_tag="U1021_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018373723.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(11074..12204)
                     /locus_tag="U1021_000545"
                     /pseudo
     CDS             complement(11074..12204)
                     /locus_tag="U1021_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000564846.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
     gene            12300..12623
                     /gene="tnpA"
                     /locus_tag="U1021_000546"
                     /pseudo
     CDS             12300..12623
                     /gene="tnpA"
                     /locus_tag="U1021_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018373723.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
     gene            complement(12763..13356)
                     /locus_tag="U1021_000547"
     CDS             complement(12763..13356)
                     /locus_tag="U1021_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HEM4711125.1"
                     /translation="MYKFWQKTIQVLSILTLIGTAIFLFWLYKIGILNDQNVLSDLIK
                     SQGALGSLSFLAIQIIQVVFPIIPGGVTTVVGFLVFHFWWGFFLNYLGISIGSIILFW
                     LARRYGKKFCLLFMSEDTFYKYESKIDNKRSYEIFFILCMLSPISPADIVVMITGLTS
                     MSYRKFIMITLLCRPFSVVAYSFFWIYGSQWLQQLLG"
     gene            13466..13813
                     /gene="ssrA"
                     /locus_tag="U1021_000548"
     tmRNA           13466..13813
                     /gene="ssrA"
                     /locus_tag="U1021_000548"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            13816..13903
                     /locus_tag="U1021_000549"
     tRNA            13816..13903
                     /locus_tag="U1021_000549"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13850..13852,aa:Ser,seq:gga)
     gene            14014..15060
                     /locus_tag="U1021_000550"
     CDS             14014..15060
                     /locus_tag="U1021_000550"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019312873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HEM4711126.1"
                     /translation="MIVNNILTKEELLMLNVQELAKTELHCHLDGSLSLSAIRQLAQL
                     AEISIPDKDEELRKLVSIDGKVDSLMTYLKTFDFVRPLLQTEEALEIATSDVLGQASE
                     DGVLYIELRFAPELSTDKGLTILEAVKAVLRGMEKAQKEFGIVAKLLVCGLKQTDPSQ
                     TREIFSAIVDLAPEGLVGFDFAGNEADYPTHELAELIDYTQPLGYPMTFHAGECGCVT
                     NVAQALTLGIKRIGHGTALSGHAEAIQAFVNSGATLEMCLTSNLQTGAADSIEHFPYR
                     ELVEAGANITINTDNRTVSNTTLNREYQLFVEYFGTTKEEFYQFNRNAIQASFASEEE
                     KANLLDVLAQKYNL"
     gene            complement(15108..15890)
                     /locus_tag="U1021_000551"
     CDS             complement(15108..15890)
                     /locus_tag="U1021_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4711127.1"
                     /translation="MFKKLLKYEFQSVGKWYLGIYAGALALSIILGFWLQALSLRAQA
                     GSTEPGGAEMVLFGTSSMTFGILIAALGLSTFFMVINRFRKNVYGRQGYLTMTLPVSS
                     HQIILSKLLASLVWYILAGITIILSIGIILAVLMLGSEEFMIPELHTVVQALDWPVIF
                     AHLFYMLIESTMGILLIYFSISVGQLFKDHRLLFAILTYIGISIVVGVFGTLVFTNYL
                     ENLYYAALPLYPSPILALINIILAFAYYFGTHFIMTKKLNLQ"
     gene            complement(15907..16614)
                     /locus_tag="U1021_000552"
     CDS             complement(15907..16614)
                     /locus_tag="U1021_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711128.1"
                     /translation="MNNAYTLVELQQVSKSYGGAVALNNVNLKLTAGKIIGLLGPNGS
                     GKTTLIKLINGLLQPEYGQVLINGRTPSPETKAIVSYLPDTTYLDESMKVSDAITFFT
                     DFYADFDKERALHLLQDLGIDLNSRMKHLSKGNKEKVQLILVMSRQAQLYVLDEPIGG
                     VDPAARDYILKTIVNNYSPTASVIISTHLISDVEQILDEVIFLQYGSVIRHENVDDLR
                     IESGESIDELFRQDFKA"
     gene            complement(16607..16981)
                     /locus_tag="U1021_000553"
     CDS             complement(16607..16981)
                     /locus_tag="U1021_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM4711129.1"
                     /translation="MAWKFDNNMPIYIQISNTIKLQIVTNQLKSGDKLPTVRDLAEIA
                     GVNPNTVQRALSDLETEGFVYSVRTTGRFVTDNHELISQTRLHLAQKELENFVTNMLD
                     LGFNQDELTHQLDDYLKGVSYE"
     gene            17135..20245
                     /locus_tag="U1021_000554"
     CDS             17135..20245
                     /locus_tag="U1021_000554"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEM4711130.1"
                     /translation="MLAQLDTKTVYTFMDSMVTIENYVGKAKELGYHALGIMDKNSLY
                     AAYSFMESCNKMGLQPIIGCELDWQLEGQEREVTTQLIALTTKGYRNLLKISTTKMTG
                     QDNFEDIRQYLVDIAVVVPYFSGIEHLELGVNYYIGVTVDTPVQDFKQAILPIHTVRF
                     FEEEQLESLQVLHAIRDNIPLNQVADIDSRQKLLSADSLTNLFSNRFPQAVDNLRDLV
                     AGISYQLNTDLKLPRFNRDRPAVEELYERSYQGLEEKGLANSLYKERLEKELSIIHQM
                     GFDDYFLIVWDLLRFGRSQGYYMGMGRGSAVGSLVAYALNITGIDPVKHNLLFERFLN
                     AERYSMPDIDIDIPDIHRADFIRYVRDRYGSTHAAQIVTYSTFGAKQAIRDVFKRFGT
                     PEYELSNITKKISFRDSLTSAYQRNAAFRQIINSKIEYQKAFAIAQQIEGQPRQTSIH
                     AAGIVMSDEDLTDTIPLKIGDDMLVTQYDAHAVEANGLLKMDFLGLRNLTFVQKMAEG
                     VRERYQQEIDIAKIDLEDKKTLELFAAGRTKGIFQFEQPGAISLLRRVKPGRFEDIVA
                     TTSLNRPGASDYSDNFVKRKHGQETVDLLDPTIAPILQPTYGIMLYQEQVMQIAQVYA
                     GFTLGKADLLRRAMSKKNAQEMQAMEAEFLQGALKNGHAEENAREIFGMMAKFAGYGF
                     NRSHAYAYSALAFQMAYFKSHYTDVFFDVMLNHSSSAYIEDAMQFDFEVARLTINNIP
                     YHDKFDKSKVYLGLKTLKGLPKDLALWILDHRPYKSVEDFILRLPDNFKKKDLLIPLI
                     QIGLFDDFDANRKKIIENLDNLFVFAEAIGTFFAEESYSWTDVEDYSDSEKFMLEQEL
                     LGVGISPHPLVNICRESKRSFTDLADLAVGNRATVLVQIQAIRLIRTKKTGEQMAFLR
                     VTDTKRTLDVTLFPESYRQYASVLEEGGMGYITGRVQERDGQLQLVLEKLEPVSLEKF
                     WILLENREHDYAVARILDKYRGSIPVVLHYQDSNQTIQAGHHMVMKTPQLEEELSEFV
                     MKTIFR"
     gene            20330..21340
                     /gene="pfkA"
                     /locus_tag="U1021_000555"
     CDS             20330..21340
                     /gene="pfkA"
                     /locus_tag="U1021_000555"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005590682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HEM4711131.1"
                     /translation="MKRIAVLTSGGDAPGMNAAIRAVVRQAISEGMEVYGINEGYAGM
                     VAGDIHELSARSVGDIISRGGTFLGSARYPEFAKLEGQLKGIEQLKKHGIEGVVVIGG
                     DGSYHGAMRLTEHGFPAIGVPGTIDNDIVGTDFTIGFDTAVTTAMDAIDKIRDTSSSH
                     RRTFVVEVMGRHAGDIALWAGIASGADVIVVPEEDFNINDIVDRIKAGYDNGKKHSII
                     VLAEGVMPAAQFAEELKAAGDTSDLRVTELGHIQRGGSPTARDRVLASRMGAHAVKLL
                     KEGRGGLAVGIRNEQMVENPILGTAEEGALFSLTAEGKIVVNNPHKADLDLAELNRNL
                     SI"
     gene            21407..22912
                     /gene="pyk"
                     /locus_tag="U1021_000556"
     CDS             21407..22912
                     /gene="pyk"
                     /locus_tag="U1021_000556"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008809276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEM4711132.1"
                     /translation="MNKRVKIVATLGPAVEIRGGKKFGDDGYWGESLDVEASAQKIAQ
                     LITEGANVFRFNFSHGDHQEQGERMATVRRAEEIAGKKVGFLLDTKGPEIRTELFEGD
                     AKEFSYTTGEKIRVATKQGIKSTREVIALNVAGGLDVFDDVEVGKQILVDDGKLGLTV
                     VEKDAVNREFVVLVENDGVIAKQKGVNIPYTKIPFPALAERDNADIRFGLEQGLNFIA
                     ISFVRTAKDVEVVRNICKETGNDHVQLFAKIENQQGIDNIDEIIEAADGIMIARGDMG
                     IEVPFEMVPVYQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGT
                     DATMLSGESANGKYPVESVRTMATIAKNAQTLLNEYGRLNSDHFNRASKTEVIASAVK
                     DACHSMNIKLVVTVTETGYSARSISKYRPDADILAVTFTEKVQKSLMLNWGVIPVVTN
                     RPDSTDDMFDLAERIAKEQGLVEAGDDIVIVAGVPVGVAGSTNTMRIRTVK"
     gene            23047..>25070
                     /locus_tag="U1021_000557"
     CDS             23047..>25070
                     /locus_tag="U1021_000557"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: protein motif:HMM:NF020596.1"
                     /note="This family includes IgM or IgG-cleaving cysteine
                     proteases; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IdeS/Mac family cysteine endopeptidase"
                     /protein_id="HEM4711133.1"
                     /translation="MDIHIRFSLRKLAVGLVPVTFLFLANQSVLSAQAETISSLEEET
                     SLLEGDLVPQSLEIINVEEQGEKNNSEFTGLNILVESDNLAQGSENEVGPSELKNELL
                     EVKIDNLFESTSIEIHADMEEKVIPEHEDSSLPSNLPVAVQKDMVEQPISLYTSEDGQ
                     YREIIWAQGITPPSMGQGGDFKKEVTGEFIEYTMPYEAGKGYYDANKSLDASLEDLNL
                     CFAAVSSNMLHWWLEQNKEYVERYISEKYGADLGQQDYSLTDIRRYTDSFENQQNSRI
                     FNLFKAYYGRRLNGFVSDALVDLFINGYPPKSQGGVNLENPDLVPDKRGGFFHEVFKE
                     KMLTDRMFSGDYLYFGNLVRNNLENQGLLGLTYRTFGTTTHIVTVWGAEYDEKGLIRA
                     VYITDSDDQHHPIGLKRMGITRDSSGKPRLNNNVVKNSFGSHLDYVHTINLGRKHWET
                     YFNGLEDEKQTARQKLSEAKFGLLHAIHAQEEFSDKEERSYLTLIEEKYFEGLKQINQ
                     AMAKQELSEILQSALQSLRIPMKSVGQALAYDRPFGNLIVHGNSVRHDLPLGHLSIHG
                     DSVRYDLPLGHLSIHGDSVKYDLPLGHLSLHGSSVTHELPVGHVSLHGSSVTHEQPVG
                     HLSLHGSSVSHELPVGHLSLHGSSVSHELPVGHLSLHGSSVTQEVPVGHLS"
BASE COUNT         7649 a         4710 c         5531 g         7180 t
ORIGIN      
        1 agaagatgct aagaaagcta tcgatgcaaa tccaaacttg tcagatgcag agaaacaagc
       61 cgctaaagat gcagtagatg catcagcagc agcggcaaat aaagcaattg acggttcaac
      121 atcttcagtt gaagttcaag ctgctaaaga taagggcaac gctgctattg cagaaaatgt
      181 tcttgatgca gctaagcaag gtgctaagaa caagcttatg gaagaagcag ataaagcgaa
      241 agcggctatc gatgcaaatc caaacttgac accagaagag aaagcagcag ctaaggctga
      301 aatcgataaa gctgttgaag aagcaattat ttcaatcaat ggtgctggaa ctcatcatgc
      361 attgggtgaa atcaaacttc cactttcagc tcttatcaaa ccagttgtaa cagtaacacc
      421 agtacttgat ccaaacaact tgactgaaga agaaattgct cgcatcaagg ctctccttga
      481 agagaacaat acattcccag aaggaactga aatcatcgtt tctaaagatg cttctgtgtc
      541 aatcaagtat ccagatggtt ctattgactt gatattgcca gcagagattg tgaaacaggc
      601 agatacaact gctcctgcga ttacagacga tgctaaaggt aatattgtag ttgctccaac
      661 taaagaggct gttgaatttg ttgttaccta cgtagataac aatggtaagg cacaacttgt
      721 tgttgttact aagggtgcag atggtaaatg gacaacaact gctaaagctg tgattgtaga
      781 tcctgttact ggtcaagtta tcattccagg ttctgctatc aagccaggaa cagttgtgac
      841 agcttactct aaagatatgg ctggaaatgt ttcagacttg aattcggcag aagttgaagc
      901 agtagatgca aataatcctg cagcaggagt gaaagtgaaa tcagttactt ctacttcaaa
      961 tgccaacaag tcaactaaga aagctaagca attgccaaat acaggtgaaa aagcaacttc
     1021 agcaacttca cttggattag cagttcttgg aatgggatta gcacttttcg cagcaaagag
     1081 aaaaaaagac gaagaagaag cttaaaataa gccattcatc gaaatctttt tgataagaga
     1141 ctagcttttc tcgaaaagtt gagtacagat ggatatctct tggtaagtca tccatctgta
     1201 cagttcaaaa taaaaaggat ctaaggtcat tagactttag gtccttttgt tgttttgcta
     1261 aaaacataaa aagtctaata gtgtgctata atagttggta tgaaaaaacg accgacatct
     1321 gcctatatcc atattccatt ttgtacccag atttgttact actgtgactt ttccaaggtt
     1381 tttattaaga accagcctgt tgacgagtat ttggctgccc tcatggaaga ggtcaagttt
     1441 tacgacctgc cagccctccg cacactttat atcggaggtg gaacaccgtc ggctctctcg
     1501 gcagaccagc tggattatct cctgaccaat ctggaggacc tgctggactt gtcacaggtg
     1561 gaagaattca ctattgaggc taatccaggt gacttgacgg cggataagat tgcggttctg
     1621 aaaaagtcca agtgcaatcg agtgtcgctg ggggtccaga cctttgatga ccgtatgttg
     1681 aaaaaaatcg gtcgtagcca caaccaagct cagatttatg aaaccattgc agccctcaag
     1741 gaagcgggtt tccataacat ttctattgac ctgatttatg ccctgcctgg tcagactatg
     1801 gaacaggtgg tcgataatgt cgccaaggcc ttggagctgg acattcccca catgagcctc
     1861 tatagcttga ttttggagaa tcacacggtc ttcatgaacc gccagcgtcg tggcaacctt
     1921 catctgccca acgaagatgt ggagtccgat atgtttgact acattcttca ggagttggag
     1981 aaaaacggct ttgagcacta cgagatttcc aacttcacca agcccggctt tgaaagccgc
     2041 cacaacctca tgtactggga caattccgag tattacggct tgggagctgg agcttcaggc
     2101 tacatcgacg gcatgcgtta tcgcaaccgc ggccccatcc agcactacct caaatccatc
     2161 cgcgaaaaag gccattcccg cctgcacgaa gagtttctca gtaagactga gcagatggaa
     2221 gaagagatgt ttttagggct acggaaaaaa actggcgtgt ctattgagcg attcgaggaa
     2281 aagtttggca tttcctttga agaccgctac ggtcaggtgg tcagagactt gaaaaatgaa
     2341 ggtctcttgc aagaagaaga ccgttggctt cggatgacca aaaaaggatt gtttcttggc
     2401 gatacagttg ctgaacgatt tattattaca gattagaaaa gagcaaaaac aatgggctta
     2461 acctaccaag aagcattcac cattctcttt gatatggtgg atgttaaaca agaaattaaa
     2521 ctgcctgact ttatttccta ctgtctcggt gtgtcaggtc ggcagtcgga agaactaggt
     2581 cgcagtgacc tctatatttt tcaggaattt ggcttgattt gggtcgtgac agattatgaa
     2641 ctaactattc aaagcctgcc taagtacaat gaaaccatca cgataaaaac agaagcggtt
     2701 gcctataaca agtttttctg tcatcggatg ttctacatct acgatgaggc aggcaatctt
     2761 ttgttggata ttctctgcta ttttgtcctg attgattttg agagtcgcaa ggttgctcca
     2821 gtaccggaag ctttgattgc tccttatcag tctgagcagg tcaagaaatt gcctcgggct
     2881 cccaagtatc agctcttgga aaatccatct gttcaagaat ttcctgttcg ctattttgac
     2941 ttggatatga atgggcatgt caataatggc aagtatctgg aatggatgta tgaagcactg
     3001 ggctatgatt gtctgctctg ccatgtccct aaaaaaatcc aactcaagta tcttaaggag
     3061 gtagaggcga ctagcttggt aagttcgcgt agggtgtcta atgcttgtgt cagtcagcat
     3121 gagattgtgg tagatggaca tatccatgct caagctgtca tagaatggag ggaacgtcat
     3181 ggcgcaggat aagtggcttg aatgggccgt acgtttacaa gccttggctc agactggttt
     3241 gtaaagatgt ctatgatatg gagcgtttcg aagaaatcag acagattgcg gcggaaatgt
     3301 tgatagagct gtctgggcag cccttggaag tcgtaaaaga actcttctgc aacgaaacag
     3361 gctaccagac cccaaaaatg gatacccgcg cagctatttt ccaagaggat aaaatcctac
     3421 tggttcagga aaacgatggg ctctggtcct tgccaggtgg ttggtgcgat gtggatcaat
     3481 ccgtcaagga caatgttgtc aaggaagtaa aggaagaagc ggggctggat gtggaggctc
     3541 tgcgagtcgt ggcgattttg gacaagcaca agaacaatcc tgccaagtca gctcaccgcg
     3601 tgaccaaggt cttcattcta tgtcgtctcc ttggcgggga gtttcagccc aattcggaaa
     3661 cagttgccag tggatttttc agcctagacg atttaccgcc actttcactt gggaaaaaca
     3721 cagtagagca gttagcgctt tgcttggaag ccagtcggtc ggagtattgg gaaacacgat
     3781 ttgattaagg aggaaaaatg acgtatacag gttatttgat tgatttggat ggtacgattt
     3841 atgaagggaa aaagcggatt cctgctggtg aacgattcat tcatcgcttg caggagcgca
     3901 acattcccta tctctttgtg accaacaata ccacccgtcg tcctgagatg gtgcaggcta
     3961 tgttggctga aaattttaac attgagacac cacttgaaac tatctacacg gccagtctgg
     4021 cgacagtaga ctatatgaat gacttgggca aggaaaagac tgtctatgtc attggagaag
     4081 acgggctcaa gtctgccatt tttgaggcag gttatgtgga agacacggaa aatccagcct
     4141 atgttgtcgt cggtttggat actcagttga cctatgaaaa actaaccatt gccaccctag
     4201 ctattcaaaa gggagctacc ttcataggta ccaatcctga tttgaacatt ccgactgaaa
     4261 gaggtcattt gccaggagca ggctcactga ttgccctcct gaaagctgct acccgtgtgc
     4321 agccgacctt tatcggtaag cctgaagcca ttatcatgga caaggctctg gagattttag
     4381 gcacagaacg cagccaaacg gttatggtgg gagataacta cctgacggat attcgtgcag
     4441 ggattgacaa tggatttcca actcttttag tcctgactgg atttaccaag ccagaagaag
     4501 tagcagactt acccctggct ccaacccatg tcctcaacag cctagatgaa tggagttttg
     4561 atgagaacta agttacagat tatcggaacg attttatttg tcttgtcggc agcagttcta
     4621 ggtacaatct acctagcttg gctagtttat ccgatagaaa tttcctacct aggcttggaa
     4681 aaagttgtct acatgaagtc atcagatatt tcctacaatt tcaatatcct gatgacctat
     4741 ttgaccaatc cttttgcaag tgttttagac atgcccaatt tttcatcatc agctgatggt
     4801 ctgaaacatt ttgcggatgt gaagcattta ttccatctaa ctcaggggat tttcctgatt
     4861 agtttgcctg cggttttcta tttttggaaa gaagtggtgc gaaaaggata tggaaaattg
     4921 tatcaagccg tctttctatg gatggcagca gtacccttat tcattgctgt actaggtttg
     4981 ttgattggtt tcgattcttt ctttactctc tttcatcaag ttctttttcc tggtgactcg
     5041 acctggctct tcaactcaaa tacagatccg gttatctaca tcttaccagc agaattcttc
     5101 ctgcattgtt ttctcctatt ctttgtcttg tatgaaatca tctgtggagc ttggctattg
     5161 ctactaagga aaaagtggaa aaagtcgtga ttatgtaaaa aaagttcttg acaatccttt
     5221 tgattgcagt tataatagta tgtaatttga aattgagggg agtgaaaaaa atgtcaaaaa
     5281 cagtagtacg caagaacgaa tcacttgatg atgctcttcg tcgtttcaaa cgtgcggtta
     5341 ctaaagctgg tactcttcaa gaaacacgca aacgcgaatt ctacgaaaaa ccatctgtaa
     5401 aacgtaaacg taaatcagaa gcagctcgca agcgtaaaaa attctaattg aatttgaaaa
     5461 cggccgaaag gctgtttttt gtttactttt tacaacaggt aacatataat agggatatag
     5521 aatttttgtc caagtgaaaa ggagtaaaga gatgagtatc ttagttactg gtggtgcagg
     5581 ttatattggt agtcatacag ttgtcggatt gttgaagttg gggaaagaag tggttatcgt
     5641 ggataatctt tcaaactcaa gtattttggt tttagatcgc attgaaacca tcactggcaa
     5701 gcgcccaact ttctatgagt tggacgtggc agataaggaa gccttgcgcc aagtttttga
     5761 aaatgaaaac attgaggcag ccattcactt tgccggctac aaggcagtag gagaatcagt
     5821 ggctaagcca attatgtact atgaaaacaa tatcatgtca accctagctt tggtggaagt
     5881 catggcagaa tttggtgtta agaaaattgt cttctcctca agtgcgactg tttatggcct
     5941 caataatcca tcgcctttgg ttgaaactat gccaactagc gcaacgaatc cgtacggcta
     6001 taccaaagtt atgttggaac aaatcttgcg tgatgtggaa gtagcagata aggagtggag
     6061 tattgcattg ctccgttatt tcaatccaat cggtgcccat gaatctggct tgattgggga
     6121 agatccggct ggtattccta ataatttgat gccgtttatt gcacaggtag ccgttggtaa
     6181 acgtccagaa ctcagcgttt ttggtaatga ttatgacaca gttgatggaa caggtgttcg
     6241 tgattatatt cacgtcattg acttagcact cggtcatatc aaggcgcttg aaaaaatttc
     6301 aactactgca ggtgtacata cttacaatct tggttcaggc caaggaacca gtgtcttaga
     6361 acttgttcaa gcttttgaaa aagtgaatgg tgtaccggta ccttataaaa ttgtagaccg
     6421 tcgccctggt gatgtggcaa cctgttacgc caacgctgat aaggctttgg aagaactcga
     6481 ttggaaaaca gagaaaacaa ttgaggatat gtgccgtgac acctggaact ggcaatcgaa
     6541 aaatccaaat ggatacgaag gataagaaaa gatgcgggta gagtacctgc atcttctatt
     6601 tttatgaaca aaaaacaagc actagacctg ataatatatt attttttcaa caaatcgcgg
     6661 atttctgcaa gcaactcttc ttgagttgga ccagctggct cttcaacctt tttaggcatt
     6721 gctttctcag ctgctttaac aacgaagaac attgaagttc cgataatcaa gaagttgata
     6781 acagcgctca agaagctacc gtatttaaca ccgttccaag aaagatcagc gatgttttga
     6841 acgtttgcag ctttcaaagc agggtttaag atcaacggag tgatgatgtc atcaacaaaa
     6901 gaagtgatga tagcgccaaa cgcaccacca attacaaccg ctacagcaag gtcaacaatg
     6961 ttcccgcgga acaagaaatt tttcaattct ttcaacatat cctaaatatg tcctttcata
     7021 aatattttat tttatctatt atacccataa aaaaatattt tacaagcaat ttgttttaga
     7081 aattttacat tttcccgtat ttagtataca atagagtatg ttaaactaag ggaagagtgt
     7141 tcacttttta aattagctag tatgatatga ggagggaatg tgctttcaaa ggataaaatt
     7201 actgaaataa aacaagctct caatatcgtt gatgttattg gtgaaacggt tgctttgact
     7261 aaggccggac gtaattatgt cggtctttgc ccttttcatg gggagaaaac cccgtctttc
     7321 aatgtgattg aagataagca gttctaccat tgttttggat gtggtaagtc cggagatgta
     7381 ttcaagtttg tcgaagaagt tcgtggtgtt tcttttgcag atgcggcagc tatcttagct
     7441 gagaaggcag ggtttcaagt agatgtaact ccttcctatc atcaagagga gaaaaaggtt
     7501 agtccgcatc aggtactgta tgatattcat cgggatgctg caaagtttta tcatgccctt
     7561 ttgatgacaa ccaaaatggg tgaggaagct agagcttatc tgcaccaacg tggcttgaca
     7621 gatgatgtca taaaaacatt ccagctaggc ttagctcctg ccgaacagaa tattctttac
     7681 caaaaactat caggtcaata tgacgaagaa agtctattga attcgggttt gttcaatcca
     7741 agtgagaata atattattta tgacgccttt caagctagga ttattttccc cttggcggat
     7801 gaatatggtc gaattgtagc tttttcaggt cggatttgga ccgaagaaga tcgaaacaat
     7861 aaacaattag ctaagtataa aaactctcgt agtactgcga ttttcaataa aagctatgaa
     7921 ttgtatcatt tggacaaggc taaagcggtt attaagaagc aacgtgaaac ctatctcatg
     7981 gaaggttttc tagatgtcat tgctgctcat cgtgtaggga ttgataatgc agtggcttct
     8041 atgggaacag ctttgacaag agagcatgtt gcacatctag ctaagttttg taagaaaatt
     8101 gttctgactt atgatgggga taaggctgga caggctgcta ccatgaaggc gttggacgaa
     8161 ctacaagatt ttcaggttga aattgtgagt ttgccagata atatggaccc agatgaattt
     8221 ttgcagaaaa attcggaaga agccttgcaa caggttttaa ccaaatcacg aatcagcgat
     8281 gtagaatttt tgattcaata cttgaaacct gaaaatcctg acaatctaca aatgcagatt
     8341 gagtttgtag ataagattgc accaattatt gccaaagtat catccattac agctcaaaat
     8401 tcttatattt ataaggtggc ggatttactt tctgactttg attataatca ggtggaacag
     8461 gcagtaaatg ctgttcgtct gaaccagcgc caggagcgaa cacaacaggt atttcaatca
     8521 cagactggtc agtcttattt gccaccagtc caaacgattg ctcgtataac gagtctaatt
     8581 cgaacagaaa accatttact ttatcggatg gttgaacatc cttatattct caatgagttc
     8641 cgtttacgag aagattttta ttttgcgacg ccagaattgc aagctattta tgatatgtta
     8701 aaaaaatctg gggaaattac cagttttgaa ctatcacagt tgaacgattc cgctcaacag
     8761 gcttggtatc gtatgcagga agaacgttta cctaatgaag tatctccaca cgaaatcgaa
     8821 gaattagaaa ttcggcgaga caaggaattg ttaaagaagg agaaccagca cttagcacgg
     8881 aaaatccgtg aacattccca tgtgggaaat gcagatattg ccctcgacga gttgcaaaaa
     8941 ctcctcgata aaagaagaca aatggagtaa atatgacaaa taaaaaagat aaaaaaacag
     9001 aagtaactac ttttgatgta caagttgccg aatttatccg taaccataaa aaacaaggtt
     9061 cagctacaga cgatgaaatc aatgaccaac tggttattcc atttacgctt gatgctgacg
     9121 gaatcgatga tttgctccaa cgtattcagg acgcagggat ttcgattgtc gataaagaag
     9181 ggaacccttc tgctcgtgct atgcaggtag aggaggaacc aggattatct gatgaagaat
     9241 tgctcggaag cacttctgca aaagtgaacg acccagtccg catgtatttg aaagaaattg
     9301 gtgttgtacc tcttttgacc aacgaagaag agcaagaatt ggcattggcg gttgaggcag
     9361 gtgacccaga agcgaaacaa cgtttggctg aagctaactt gcgtttggtt gtatccattg
     9421 ccaaacgcta tgtcggccgt ggtatgcagt tccttgatct tatccaagaa ggaaacatgg
     9481 gcttgatgaa ggccgttgat aagtttgact attcaaaagg tttcaagttt tcaacctatg
     9541 caacctggtg gattcgtcag gctatcactc gtgccattgc ggaccaagct cggactattc
     9601 ggatccctgt tcacatggta gaaaccatta acaaattggt ccgtgaacaa cgcaatctct
     9661 tgcaagaatt gggccaagat ccaacaccag aacaaattgc tgagcgtatg gatatgacgc
     9721 ctgagaaagt tcgtgaaatc ctcaagattg cccaagagcc tgtttcactc gagactccaa
     9781 ttggtgaaga agatgatagc catttgggag atttcattga agatgaagtg attgaaaatc
     9841 cagttgatta cacaactcgt gtcgttcttc gtgaacagtt agatgaggta ttggatactc
     9901 ttactgaccg tgaggaaaac gtattgcgtc ttcgttttgg tttagatgat ggtaaaatgc
     9961 gcacgcttga agatgttggc aaggtcttta acgtaacccg tgaacgcatc cgccaaatcg
    10021 aagccaaagc cctccgtaaa ctccgccacc catcccgcag caaaccactc agagatttta
    10081 tagaggatta aaacaccact ggcgtggtgt tttaacccga gcctagaaat aagaaagcga
    10141 ggttaacctc cgggggaggt tttcaaccgc tcgctgaaaa caggaaacga gcgaaggtac
    10201 tgcgtacctt tttaaccgct cgccttgaaa ttagaaaggg agcgtaacgt ccagtggact
    10261 ttttgacaca aacttggttt gtttcttttc tagtattgaa cttgtgaaaa agaaagagag
    10321 aaaaatgacg tacacagaag atcaaattaa agacattcag gagcgtattt ttcatgctct
    10381 tgaagatgtg attgaccctg agctaggtat tgatattatc aatttagggc taatttatga
    10441 aatccgattt attgagggca aggctgaaat tgatatgacc ttgacgacca tgggttgtcc
    10501 attagctgat ctaattaccg atcaaattca tgatgtactg aaggatgtcc ctgaagtaac
    10561 agaagtagat gtgagactgg tttggtcacc agcttggacc gttcaaaaaa tgagtcgtta
    10621 tgctcgaatt gcattaggaa taaaataaaa aaaacaaaat ggtttcgaac gtttgaagcc
    10681 atttttttat tatggcttcg agccagtttt tctcgtagag aaaaacaaga aagccaccag
    10741 ctatgctggt ggctgccaag gctttgagtt tccatttctt tttcctgtta taatctaatt
    10801 gttcaggtta gatcaaggag gaaaaagaaa tggctaaaac cagttacagt ttatcacata
    10861 ctaaatggat gtgctctatc acatagtttt cacacctaag taccgtagaa aatccattta
    10921 ctacaaaata aggcaggatt taattgatat tttccgtcat ctatgtcgat gcaaaggcgt
    10981 ggacatcacg tcatacgcat gaaaaatttc ttctctcctt ttgtccccgg aaataactgc
    11041 tttaaactta gtatctacct ttttacaagc accttatccc cgatttccaa ataattgtgg
    11101 caaataatcc tccaaatgga cagaaatata gcgttgtttg cggcggtaac tcaatttctc
    11161 cttagggaag gtcatcattt gtaagagatg aagacaagcc ttacgaatag catttaaatt
    11221 gaaagcagct cgtttatcta aggtttggtt cttatcttct cggtaaacca catctaacaa
    11281 ccaatgtagg ctctcaaccg accaatgacc acgaacaacc tgagaaaaag tttgcacatc
    11341 gcccttgaaa ctaaggataa agtaacggac ctcttcggtg atgacaccat ctttatcaat
    11401 gatattctta gtcataccaa tcccacgaag ttttttccat ttcggatgtc gttggctcag
    11461 ccatttcaca tcgtgagaaa cccagtagtc cctcacctca atctgactgc gtgccttttc
    11521 aatggtctga taatgacagc ctttctctgt caacgtagat aacaatttgg cgtcactaaa
    11581 atagaggtca atatcctcat ggagattgcc ttgatttcct ttgactgcca agcaataatc
    11641 acccttaccg ctgataatca catccgcaat gtctgtctag gtgcccatgg catcaatcgt
    11701 gacaacactc ttacgaaggt ctagctgaca caagaggcga ggaatggctg tgatttcatt
    11761 acttttatcc tcaacagcta cctgcccaag gctaatccga ttaccaccat cataagcagt
    11821 gacaatatga gtaggagatt ggtatttccc tcggttcccc cgaatcgttt ttccgtcaac
    11881 ggcaatcaat tttgaaaaat cagttgtttc cgaactagct tcgaaggaca gtttcagttc
    11941 ctttaagaaa tctggattga ccatactcac aacacgttcc aaggtgtcat gagaaagaca
    12001 gccgacactc aagtcaacgt attctcccaa aacagactcg ttcatttcta tgaaatcttc
    12061 catctctttc cacgtttcaa cccctgccaa ttgacaagcg aaaactagaa acagaatagt
    12121 ggataaggga taacgaattt tccatgcttg acggctgttg tactcctctt tgtgctcttc
    12181 tatggataaa agaaaatcaa ttattgtagt tcacctctat tctagtgtac tactttgatt
    12241 gatctttggt tatgattttc gctttctgaa aacgtttttt tcttcatgcg tttggtgtgg
    12301 tggaaatcat tgagggacac atgatgccag accatgttca tatgcttgtc ttgatatccc
    12361 caaaactttc gatttccgat tttatgggat atttgaaaag taaaagtgct ctcatgatat
    12421 ttgataaaca tgctaattta aaatataagt atggaaatcg aaagttttgg gctagaggct
    12481 actatgtgag tatcgttgga ctgaacgaaa agacggtagc gaaatatatt cgcgagcagg
    12541 agaaaaatga catcgcactt gataagttaa gtgttaaaga atatgaagat tcattttcag
    12601 atagtagttt tagaacaaga taaaagcccg ttgttacggg ctttagtcaa gtaattatag
    12661 cactaacctg aacgaagttc agcgaacgtc tttagacgtc gctggagaga aacggcttat
    12721 agccggtgta caagccaccc gttttcacgg gtggttatga ttttatccta acaattgctg
    12781 caaccattgg ctgccataga tccaaaagaa gctataggcc acaactgaga aagggcgaca
    12841 aagtaaagta atcataataa atttccgata actcatgctc gttaatccag taatcatcac
    12901 cactatgtca gctggagaaa tgggagaaag catgcagaga ataaagaaaa tttcataact
    12961 acgtttatta tcaattttgc tttcatattt gtaaaacgta tcttcagaca tgaagaggag
    13021 acaaaatttc tttccatagc gacgagccaa ccagaaaagg atgatactac cgattgaaat
    13081 tccaagataa ttgagaaaga atccccacca aaaatgaaat acgaggaaac ccacaacagt
    13141 cgtaacaccg cctggaataa tcggaaatac aacttgaata atctgaatag ctaaaaagga
    13201 gaggctacct aaagcacctt ggcttttgat taaatcgctt aagacatttt ggtcgttcaa
    13261 aatgccaatc ttatagagcc aaaacagaaa aatagcggtc ccgataaggg tcaaaatact
    13321 taatacttga atggtttttt gccaaaattt atacatactt tcattttacc atatttcaaa
    13381 ttttttttaa attgtaagga aaatgtaaaa taattttgct atttataaaa aattctgcta
    13441 taataattcc tgtatcaaat cctacggggt tgttacggat tcgacaggca ttatgaggct
    13501 tgttctgcaa ctcatcggca gatgtaaaaa tgccagttaa atataactgc aaaaaataca
    13561 aacacttacg cattagcagc ttaataacct gcctgcgtga ccagtcgcga attgcttgtg
    13621 tttgctgatt ggtcttaaaa tagcaagcta cgttgggatt gagtcaggca gttccaaaag
    13681 agatttactg actcgcttgg tctaggtttg agttatgtat cgagttcaag ttaaagcaag
    13741 acataaccta tggttgtaga cgaataagtt agcaggtgtt tggacgtggg ttcgactccc
    13801 accagctcca tatatggaag attactcaag aggctcaaga ggccgtgttg gaaacgcggt
    13861 aggcgtgtaa cagcgtgcgt gggttcgaat cccatgtctt ccgtatggca agaacgatga
    13921 aaatcgttct ttttttcttg cacttgaaac tatctaataa gaataatgtt cattttttgc
    13981 gaaaattatc ttgtaattta tcaaaaatgt gatatgatag ttaacaatat acttacgaaa
    14041 gaggaattgt tgatgttgaa tgtacaagaa ttagccaaga cagaattgca ttgccatttg
    14101 gatggttccc tatctttatc ggcaatccga caacttgccc aactggcaga gatttccatt
    14161 ccagacaagg atgaggaact cagaaaattg gtcagcatcg atggtaaggt tgatagcctg
    14221 atgacctatt tgaaaacatt tgactttgtt cgacctcttc tacaaactga ggaagcgctg
    14281 gaaatagcaa cctccgatgt tctaggtcaa gcatcagagg atggagttct ctatattgaa
    14341 cttcgttttg caccagaatt atcgactgac aagggtttga ctatcctgga agctgtgaaa
    14401 gccgtcttgc gtgggatgga aaaggctcag aaagaatttg gtatagttgc caagctcttg
    14461 gtctgtggct tgaaacaaac tgatccaagt cagaccagag aaatcttttc tgctattgtc
    14521 gatctggcac cagaaggatt ggtcgggttt gattttgctg gaaacgaggc agactaccca
    14581 actcatgagc tggctgagtt gattgactac acacaacctc taggttaccc catgaccttc
    14641 catgctggtg agtgtggttg cgtgaccaat gtagctcaag ctctgacctt gggtatcaag
    14701 cggattggac acggaacggc tcttagcggt cacgctgagg ctattcaggc ttttgtcaat
    14761 agcggagcaa cgcttgagat gtgtctaaca tcgaatcttc aaactggtgc agctgattcg
    14821 attgaacatt ttccatatcg tgagctagtt gaggcaggag caaacatcac aatcaacaca
    14881 gataatcgta ccgtttctaa tactacactt aatagagaat atcagctatt tgtagagtat
    14941 tttggaacta ccaaggaaga attttatcaa ttcaacagaa atgctattca agcaagcttt
    15001 gccagtgaag aagaaaaggc gaacttactt gatgtcctag ctcaaaagta taatttgtaa
    15061 aaagaaagct ctaggccatg tcaaaacgac cggcaaagag ctttttctta ttgcaaattc
    15121 aatttcttgg tcatgataaa gtgtgtacca aaatagtagg caaaggccag aatgatattg
    15181 atcaaggcca agataggact tgggtataat ggtagcgcgg cataataaag gttctctaga
    15241 taattggtaa aaacgagagt tccaaacaca ccaactacaa ttgaaatacc aatataggtc
    15301 aaaatggcaa acagaagacg gtggtcttta aacaattgac cgactgagat ggagaagtag
    15361 atcagcaaga ttcccattgt tgactcaatc agcatataga atagatgtgc aaatatgaca
    15421 ggccagtcta atgcttgtac aacagtatgc aattcaggaa tcatgaattc ttcacttccg
    15481 agcatgagga ccgctaaaat gattccaata gaaagaataa tggtaattcc agctaatatg
    15541 taccaaacca atgatgccaa gagtttgctg aggataattt gatggctgga gaccggtaag
    15601 gtcatggtta aatagccctg acgaccatag acattctttc taaatcggtt aataaccatg
    15661 aaaaaggtgg ataaaccaag tgctgcaatt aagataccga aggtcatgga ggaagtaccg
    15721 aaaaggacca tttcagcacc accaggttca gtgcttccag cttgtgcccg taagctcaaa
    15781 gcttgtaacc aaaacccgag tatgatagat agggccaatg ccccggcata aattcctaga
    15841 taccattttc caacggattg aaattcatat ttgagtaatt tcttaaacat agcaatctcc
    15901 ttctaactaa gccttaaagt cttggcggaa gagttcgtca atggactcgc cactttcaat
    15961 acggagatca tccacgtttt catggcgaat aacgctacca tattgaagga aaataacctc
    16021 atccaaaatt tgctcgacat ctgaaattaa gtgagtagag ataataacag aggcagtcgg
    16081 agagtagttg ttgacgatgg tttttaaaat ataatcacga gcagcagggt caacaccacc
    16141 aattggctca tctaaaacat acagctgcgc ttggcggctc attaccaaga tcagctgaac
    16201 cttttccttg ttcccttttg acaggtgttt catgcggctg ttcaagtcaa tccccagatc
    16261 ttgcaagaga tggagggcac gttccttgtc aaaatctgca tagaaatctg taaagaaggt
    16321 gatagcatca gaaaccttca tgctttcatc aagataggtc gtatctggca aataggatac
    16381 aattgccttg gtttcaggtg aaggagtacg accgttgata aggacttgac catactcagg
    16441 ttgcaatagt ccattgatga gtttgattaa cgtcgtctta ccagaaccat ttggtcccaa
    16501 aagtccaata atcttaccag cagtcaattt caagttaaca ttgttgagag ctacagctcc
    16561 gccataggat tttgaaacct gttgtaattc gaccagggta tatgcgttat tcataagaca
    16621 ctcctttcaa ataatcatct aactggtggg ttaattcatc ttgattgaag cccaagtcta
    16681 gcatattggt cacaaagttt tcaagttctt tctgtgccaa atgcagtcgg gtctgtgaaa
    16741 tcaattcgtg attgtctgtg acgaaacgtc ctgttgtgcg gactgagtaa acaaatcctt
    16801 ccgtttccaa atcagacagg gcccgttgca ccgtgtttgg attgacgcca gctatttcag
    16861 ccaagtcacg cacggttggc aatttatctc ccgatttcaa ttgattggtc acaatctgta
    16921 attttatagt attactgatt tgaatatata tgggcatatt gttgtcaaat ttccaagcca
    16981 ttgttctttc ctttctaggc atttttcgcc aatacctatg ttctaactaa ataatacaat
    17041 aaaacataat aaattgcaag tcttttgatt gaatttctta aaaatatttt cctagaatat
    17101 ttggtataat agaagaaata aaaaggagaa gaccatgctg gcacaactag atacaaaaac
    17161 cgtctatacc tttatggata gcatggtgac gatagaaaat tatgtaggca aggctaaaga
    17221 gcttggttac cacgcattgg ggataatgga taaaaacagt ctttatgcag cctatagttt
    17281 tatggaatcc tgtaacaaaa tggggcttca accaattatt ggttgtgaat tggactggca
    17341 gttggagggg caggagcgag aagtgacaac tcagttgatt gccttgacca ccaagggcta
    17401 tcgaaatctc ttgaaaatat cgactacaaa aatgactgga caggataact ttgaagatat
    17461 tcgccagtat ttagtcgaca tagcagtggt tgttccttat ttttctggca ttgagcacct
    17521 tgagttaggt gttaactatt atatcggagt gacggttgat acaccagttc aagactttaa
    17581 gcaagcaata ctcccaattc atacggttcg tttttttgaa gaggaacaat tggaaagtct
    17641 acaggttctc catgctattc gagataatat tccacttaat caagttgcag atatagatag
    17701 tcgacaaaag cttttatcgg ctgatagctt aaccaatcta ttttctaatc ggtttccgca
    17761 agcagttgat aatttacgtg acttggttgc agggatttct tatcaattaa atacagattt
    17821 aaaattgccg cgttttaatc gtgacagacc tgcagtggaa gaattatacg agcgctccta
    17881 tcaaggatta gaagagaagg gcttggctaa ttcactatat aaagaacgtt tggaaaagga
    17941 attatccatt attcatcaaa tgggatttga tgattatttc ttgattgtat gggacctact
    18001 tcgttttgga cgtagccaag ggtactatat gggaatgggg cgcggttcag ctgttggaag
    18061 cctagttgcc tacgccttaa atatcacagg tattgatcct gttaagcata atcttctctt
    18121 tgaacgcttt ctcaatgctg aacgttattc aatgcccgat attgatattg atattccaga
    18181 tattcatcga gcagatttta ttcgttatgt acgagatcgt tatggttcaa cccatgctgc
    18241 gcaaattgta acctactcga cttttggagc taagcaggcc attcgtgatg tatttaagcg
    18301 tttcggaaca cctgaatatg agttaagtaa tattaccaag aaaatttcat ttagggatag
    18361 tcttacttct gcctatcagc gaaatgccgc ttttcgtcag attatcaata gtaagataga
    18421 gtaccaaaaa gcttttgcga ttgctcaaca aattgaaggg caaccccgac agacttctat
    18481 ccatgcagca gggatagtga tgagtgatga ggacttgaca gataccatcc ctcttaaaat
    18541 aggggatgac atgctggtaa cccaatatga tgcacatgct gttgaggcga atggtctgtt
    18601 gaaaatggat ttccttggct tacgaaatct gacctttgtg caaaaaatgg cagaaggagt
    18661 acgtgaacgt tatcagcagg aaattgatat tgccaagatt gatttagaag acaagaaaac
    18721 cttggaactt tttgctgctg gtcggactaa gggaattttt caatttgaac agcctggtgc
    18781 gattagcctg cttcgaaggg tcaaacctgg tcgatttgaa gatatagttg caacaacgag
    18841 tttgaataga ccgggggcta gtgattattc ggataacttt gtaaaacgca aacatggaca
    18901 agagacagtt gatttgttgg acccaaccat tgctcctatt ttacaaccga cttatggtat
    18961 catgctttat caggaacagg tcatgcagat tgcacaggtc tatgcaggat ttacgcttgg
    19021 caaggcggat ttactccgca gggcgatgtc taaaaagaat gcccaggaaa tgcaggcaat
    19081 ggaagcggaa tttttacagg gagcactgaa aaacggacat gctgaagaga atgcaaggga
    19141 aatatttggc atgatggcta agttcgctgg ttatggtttt aaccgtagcc acgcctatgc
    19201 ttattcagcc ttagcctttc aaatggccta tttcaagagt cactatacgg atgtcttttt
    19261 tgatgtcatg ctcaatcatt ctagcagtgc ttatattgaa gatgcgatgc agtttgactt
    19321 tgaggtagct cgactcacga ttaacaatat tccttatcac gataagtttg ataaaagtaa
    19381 ggtctaccta ggattaaaaa cactgaaagg tttgcctaaa gatttagctt tatggatatt
    19441 ggatcatcgt ccctataagt ctgtagaaga ttttattttg cgcttgccag ataatttcaa
    19501 gaaaaaggat ttactaatcc ctcttattca gattggttta tttgatgatt ttgacgccaa
    19561 tcgtaaaaag attattgaaa atcttgacaa tctctttgtc tttgcagagg caattggtac
    19621 attttttgca gaggagagtt atagttggac agatgtggaa gattacagcg acagtgaaaa
    19681 atttatgcta gagcaagaat tgctaggtgt tggtattagt ccgcatcctt tagtcaatat
    19741 ttgtcgagag tctaagcgta gttttacaga tttggctgat ttagcggttg gcaatcgagc
    19801 gaccgttctt gtgcagattc aagctattcg attgattcgt accaaaaaga ctggagaaca
    19861 gatggcattt cttcgagtga cagataccaa gaggacgctt gatgtgactc ttttcccaga
    19921 atcttatcgc caatacgctt ctgttttgga agaaggggga atgggctata ttacaggtag
    19981 agtgcaagag cgcgatggac agttgcaatt agttctagaa aaattagagc ctgtcagttt
    20041 ggagaaattt tggattcttt tggaaaatcg agaacacgat tatgccgttg ctcgtatttt
    20101 ggataaatat agaggaagca ttccagtagt acttcattat caagatagta accagacaat
    20161 tcaggctggg caccacatgg ttatgaaaac gcctcaatta gaagaagagt taagtgaatt
    20221 tgttatgaaa acgatttttc gataaaaaaa tagcaaaaag tcaagcaagt ttaggttaag
    20281 tatgttataa tagggcagtt aaaatgaaaa gttaaaggag cattaacgaa tgaaacgtat
    20341 tgctgttttg accagtggtg gtgatgcccc tggtatgaac gctgctattc gtgcagttgt
    20401 tcgccaagca atttcagaag gaatggaagt ttatggaatc aacgaaggtt acgcaggtat
    20461 ggttgcgggt gatatccatg aattgtctgc acgttctgta ggtgatatta tttcacgtgg
    20521 aggaacattc cttggttcag ctcgttatcc agaatttgcc aaattagaag ggcaacttaa
    20581 agggattgag caattgaaaa aacatggtat cgaaggtgta gttgttatcg gtggtgatgg
    20641 ttcttaccac ggagcaatgc gcttgacgga gcatggtttc ccagctattg gtgtacctgg
    20701 tacaattgat aatgacatcg taggtacaga ttttacaatc ggttttgata cagctgtaac
    20761 aactgctatg gatgcgattg ataaaatccg tgatacttca tcaagtcacc gtcgtacttt
    20821 cgttgttgaa gtaatgggac gtcatgcggg agacatcgct ctttgggctg gtattgcttc
    20881 tggtgcagat gttatcgttg ttccagaaga agacttcaat atcaacgata ttgttgaccg
    20941 tattaaagcg ggctacgaca atggtaagaa acatagcatc attgttttgg ctgaaggtgt
    21001 tatgccagct gcacagttcg ctgaagaatt gaaagcagca ggcgatacaa gtgatcttcg
    21061 tgtgacagaa cttggtcata tccaacgtgg tggttctcca acagcgcgtg atcgcgtact
    21121 cgcttctcgt atgggtgctc atgccgttaa attgcttaaa gaaggccgtg gaggtcttgc
    21181 agtaggtatc cgtaacgagc aaatggttga aaatccaatt cttggtactg cggaagaagg
    21241 agcattattc agcttgactg cagaaggtaa gattgtcgtg aacaatccac ataaagcaga
    21301 tttggatctg gctgaattga accgtaactt gtcaatctaa tttgacattt cattaaagtg
    21361 ttattaaggg tcataagacc attaaataaa aaggagtttt gttaagatga ataaacgtgt
    21421 aaaaatcgtt gcaacccttg gtcctgcggt agaaatccgt ggtggaaaaa aattcggtga
    21481 tgatggttac tggggtgaaa gccttgatgt agaagcgtca gcacagaaaa ttgctcaatt
    21541 gattaccgaa ggtgcaaacg tattccgttt caacttctca catggtgacc accaagaaca
    21601 aggtgagcgt atggcaactg tacgccgtgc ggaagaaatt gctggtaaaa aagttggttt
    21661 cttgttggat acaaaaggtc cagaaatccg tacagaattg tttgaaggcg atgcaaaaga
    21721 gttttcatac acaactggtg aaaaaatccg cgtagcaact aaacaaggca ttaagtcaac
    21781 tcgcgaagtg attgcattga acgttgcagg tggtttggat gtatttgatg atgttgaagt
    21841 tggtaagcaa atccttgttg acgatggtaa acttggtttg acagttgttg aaaaagatgc
    21901 agtaaaccgt gaatttgttg ttttggttga aaacgacggt gtaattgcta aacaaaaagg
    21961 tgtaaacatc ccttacacaa aaattccttt cccagctctt gcagagcgtg ataatgcaga
    22021 tatccgcttc ggtcttgagc aaggtttgaa ctttattgct atctcatttg tacgtactgc
    22081 aaaagacgta gaagttgttc gtaacatctg taaagaaact ggtaacgacc acgttcaatt
    22141 gtttgcaaaa atcgaaaacc aacaaggtat cgacaacatc gacgaaatca tcgaagcagc
    22201 agatggtatc atgattgctc gtggtgacat gggtatcgaa gtaccattcg aaatggttcc
    22261 agtttaccaa aaaatgatta tcactaaagt gaatgcagct ggtaaagcag ttatcacagc
    22321 aacaaacatg ttggaaacaa tgactgaaaa accacgtgca actcgttctg aagtatctga
    22381 cgtattcaac gcagttatcg acggtactga cgcaacaatg ctttcaggtg agtctgcaaa
    22441 cggtaaatat ccagttgaat cagttcgtac aatggcaact attgctaaaa acgcacaaac
    22501 tcttcttaat gaatacggtc gtttgaactc tgatcacttt aaccgtgcat ctaaaacaga
    22561 agttattgca tctgcagtaa aagatgcttg tcactcaatg aacatcaagt tggttgtaac
    22621 agttactgaa actggttact cagctcgttc aatctctaaa taccgtccag atgctgacat
    22681 cttggcagta acatttactg agaaagtaca aaaatcattg atgcttaact ggggtgttat
    22741 cccagttgta acaaaccgtc cagattcaac tgacgatatg tttgatttgg ctgaacgcat
    22801 tgccaaagag caaggtcttg ttgaagcagg agatgatatt gttatcgttg ctggtgtgcc
    22861 tgtaggtgtt gctggttcaa caaacactat gcgtattcgc actgtgaaat aatgtataaa
    22921 gaaaaagtct attctatcaa gctccttagc ttgaatgata ggcttctttg aatatatggt
    22981 atgattttgc aaaattcaaa ttgtattgat ataatataag gtgactaagt tgaaagagat
    23041 ggacatatgg acattcacat tcgtttttcg ttgagaaaac tagcagttgg tttagttcca
    23101 gtgactttcc tatttctagc caatcagtct gttctatctg cccaagcaga aacgatttct
    23161 agtctagaag aagaaacttc cctgttggaa ggagacttgg taccacaatc gcttgaaatc
    23221 ataaatgtag aagaacaagg ggaaaagaat aatagcgaat ttacaggtct aaatatatta
    23281 gtagaaagtg acaacctagc tcaagggagt gagaatgaag taggcccttc tgagctgaaa
    23341 aatgagttac ttgaagtgaa aattgataac cttttcgagt ctacaagtat tgagatccat
    23401 gcagatatgg aagagaaggt cattcctgag cacgaagata gtagcctccc ttctaatcta
    23461 ccagtagcag tccagaaaga tatggttgaa cagcctatca gtctttatac tagcgaagat
    23521 ggtcagtaca gagaaattat ttgggcacaa ggtataacgc ctcctagcat ggggcaaggt
    23581 ggtgatttta aaaaagaagt aacgggagaa ttcattgagt ataccatgcc ttatgaagcc
    23641 ggaaagggtt attatgatgc taataagagc ttggatgctt ccttagaaga tttgaacttg
    23701 tgttttgcgg cagtttcttc caacatgttg cactggtggt tggaacaaaa taaggagtat
    23761 gtagaacggt atattagtga gaaatatgga gctgatttag ggcagcagga ctattctttg
    23821 actgatataa gacgttacac agattctttt gaaaatcagc aaaatagccg aatttttaac
    23881 cttttcaagg catattacgg tcgtcgtcta aatggatttg tatcagatgc cctggtggat
    23941 ctatttatca atggctatcc cccaaagagt caaggagggg tcaatttaga aaatcctgat
    24001 ttggtgcctg ataaacgcgg tggctttttt catgaagtat ttaaggagaa aatgctgacg
    24061 gataggatgt tcagcggaga ttatctctat tttggaaatt tggttcgaaa taacttagaa
    24121 aatcaaggtt tacttggctt gacctatcga acttttggaa cgactactca tattgtgacg
    24181 gtctgggggg ctgagtatga tgagaaggga ttgatccgag cagtatatat tacggattcg
    24241 gacgatcagc atcatccaat tggcttgaaa cggatgggaa tcacacggga ttcctctggc
    24301 aaacctcgtt taaataataa tgtcgtgaaa aattcgtttg gttctcatct ggactatgtt
    24361 cataccatca atcttggtcg gaagcattgg gaaacttatt ttaatggatt ggaagatgaa
    24421 aaacagactg ccagacagaa actttcagaa gctaaatttg gcttacttca cgcaatccat
    24481 gctcaagagg agttttctga taaggaagaa aggtcttatc ttaccctaat tgaagaaaaa
    24541 tattttgaag gtttgaagca aatcaatcaa gctatggcaa agcaggaact atcagaaatc
    24601 ttgcaatccg ctctgcaaag tttacggatt cccatgaaat ctgttgggca agctctagct
    24661 tacgatagac cgtttggaaa tcttattgtt catggaaact cagttcgaca tgatttgccc
    24721 ttaggtcatc tatctattca tggtgattca gttagatatg atttgccctt aggtcatcta
    24781 tctattcatg gtgactcagt taaatatgac ttgcctttag gacacctatc tcttcatgga
    24841 agctccgtca cgcatgagtt gcccgtcggt catgtttccc ttcatggaag ctccgtcacg
    24901 catgagcagc cagttggtca cttgtccctt cacggttctt cggtcagcca tgaattacca
    24961 gtaggtcatt tgtcccttca tggttcttct gttagccatg aattgccagt tggtcacctg
    25021 tctcttcatg gaagctccgt cacgcaagag gttcccgttg gtcacctgtc
//
LOCUS       DASFQD010000017        24583 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.017, whole genome shotgun sequence.
ACCESSION   DASFQD010000017 DASFQD010000000
VERSION     DASFQD010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 24583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24583
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.017"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(41..1390)
                     /locus_tag="U1021_000558"
     CDS             complement(41..1390)
                     /locus_tag="U1021_000558"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEM4711134.1"
                     /translation="MTHITFDYSKVLGQFVGAQEVEYMQPQVTLADQMLRQGTGPGSD
                     FIGWLDLPENYDKEEFARIKEAAAKIQNESEVLVVIGIGGSYLGAKAAIDFLSNAFVN
                     LQTREERKAPQILYAGNSISSSYLADLVDYVADKDFSVNVISKSGTTTEPAIAFRVFK
                     ELLVKKYGQEEANKRIYATTDKAKGAVKVEADANGWETFVVPDDVGGRFSVLTAVGLL
                     PIAAAGADIDALMEGANAARTTFTSDKIAENQAYQYAAVRNILYRKGYVTEILANYEP
                     SLQYFSEWWKQLAGESEGKDQKGINPTSANFSTDLHSLGQFIQEGNRNIFETVVRVDK
                     PRKNILIPDMAEDLDGLGYLQGKDVDFVNKKATDGVLLAHTDGGVPNMFVTLPQQDEF
                     TLGYTFYFFELAIAISGYLNAINPFDQPGVEAYKKNMFALLGKPGFEELGAELNARL"
     gene            complement(1472..2014)
                     /locus_tag="U1021_000559"
     CDS             complement(1472..2014)
                     /locus_tag="U1021_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711135.1"
                     /translation="MFLFAFPGMGKTTLAKKYTDVVDLEMSDIKYDNSSVRHLTKEER
                     KSTKRPLKDKRYKTIYVNKAYTLHRQGKTVLVALNFLMRMLLAMSIRGGVPFHIYIPH
                     PSLKEEYRQRYISRGNNDRFIFEVMFIWYPALIPLYLLSKILPKWITVTQSGETLEDY
                     YKRENFVRFSQKLRFIQHIS"
     gene            complement(2154..2243)
                     /gene="ffs"
                     /locus_tag="U1021_000560"
     ncRNA           complement(2154..2243)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="U1021_000560"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            complement(2287..2808)
                     /gene="tadA"
                     /locus_tag="U1021_000561"
     CDS             complement(2287..2808)
                     /gene="tadA"
                     /locus_tag="U1021_000561"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HEM4711136.1"
                     /translation="MNYTHEEKEYFMTQALQEARKSLEKDEIPIGCVIVKDGQIIGRG
                     HNAREELNQAIMHAEVMAIQEANNVEGNWRLLDSTLFVTIEPCVMCSGAIGLARIPQV
                     IYGATNKKFGAAGSLYDILTDERLNHRVKVETGILEAECANIMQDFFRQRRESQKAAK
                     LIMKTQEEAISDS"
     gene            complement(3089..5059)
                     /gene="tkt"
                     /locus_tag="U1021_000562"
     CDS             complement(3089..5059)
                     /gene="tkt"
                     /locus_tag="U1021_000562"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEM4711137.1"
                     /translation="MSNLSVNALRFLGIDAIEKSKSGHPGVVMGAAPMAYSLFTKELR
                     INPAQPNWVNRDRFILSAGHGSMLLYGLLHLSGFEDVTMDEIKNFRQWGSKTPGHPEF
                     GHTAGVDATTGPLGQGISTATGFAQAERFLAAKYNRDGFPIFDHYTYVICGDGDLMEG
                     VSAEAASYAGLQKLEKLIVLYDSNDINLDGETKDSFTEDVRARYNAYGWHTDLVTDGT
                     DVDAIFAAIEKAKVAGKPSLIEIKTVIGHGSPNKQGTNAVHGAPLGAEETEATRKALD
                     WNYAPFEIPAEVYADFKANVADRGAAAYDAWVKLVEDYKVAHPELAAEVTAILEGRDV
                     VEIKPEDFPVYENGFSQATRNSSQDALNAAAKVLPTFLGGSADLAHSNMTYIKEDGLQ
                     DSVNPLNRNIQFGVREFAMGTILNGMAAHGGLRVYGGTFFVFSDYVKAAVRLSALQGL
                     PVTYVFTHDSIAVGEDGPTHEPIEHLAGLRAMPNLNVFRPADARETQAAWYLSLTSKS
                     TPSALVLTRQNLTVEEGTDFDKVAKGAYVVYEAAGFDTILLASGSEVNLAVKAAKELE
                     VAGTKVRVVSVPSTELFDAQDAAYKEEILPNAIRRRLAIEMGATQSWYKYVGLDGKVL
                     GIDTFGASAPAQTVIDNYGFTVENVVKLVGEL"
     gene            complement(5271..6362)
                     /gene="ulaG"
                     /locus_tag="U1021_000563"
     CDS             complement(5271..6362)
                     /gene="ulaG"
                     /locus_tag="U1021_000563"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001863918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HEM4711138.1"
                     /translation="MAKVQDITRESWILSTFPEWGTWLNEEIEEEVVPEGNFAMWWLG
                     NCGVWIKTPGGANVVMDLWSSRGKSTKKVKDMVWGHQMANMAGVRKLQPNLRVQPMVI
                     DPFAINELDYYLVSHVHSDHMDISTAAAIINNPKLDHVKFVGPVESGDIWEKWGVPAD
                     RIIRIAPGDSFEFKDIKVHAVESFDRTCLVTLPIEGYDENGGKLAGLPVTDELMARKA
                     VNYVFETPGGTIYHGADSHFSNYFAKHGRDFNIDVAINNYGDNPIGIQDKMTSIDLLR
                     MAENLRAKVIIPVHYDIWSNFMASTDEILQLWKMRKERLQYDFHPFIWEVGGKYTYPL
                     DKDCIEYHHPRGFDDCFLEDSNIQFKALL"
     gene            complement(6472..8160)
                     /locus_tag="U1021_000564"
     CDS             complement(6472..8160)
                     /locus_tag="U1021_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator"
                     /protein_id="HEM4711139.1"
                     /translation="MLLDKSSCALLRYLIGLQEPETIMAISKGLQQSRRKIYYHLEKI
                     NDALPTTVESIESLPRLGIRLTEAQKLACRDLLDSIDSYTYVMSMPERIQLMLVYICI
                     TPERVTIERLMELTEVSRNTVLNDLNEIRTQLAQEQYKMTLYVSKSHGYSLVCHPLNK
                     IQYVHSLLYTIFLDANKGFLQVLEDKLFELVGCQLLFSEEMAQFLQGQVSQLEKKLGK
                     KINRYEIEFMLKVLPFLLLSYRNMELDDLEERAILKEFEQVRERIEYRVAQELKDALL
                     QTFDLKLDEIEISLIAILLLSYRKDSDVHVFSQDFIDLKRVVERFIHHFEIHSPFELE
                     NPDELAKHLLAHCKALLFRKTYGILSKNPMVQQIQDKYGTLFAMTRVSGKILEEEWQI
                     ELSDGDIAYLTIHLGGAIRRSGTRKAQTQIVYLICDEGVSVQRLLYKQCQHHLPDKKI
                     GAVFTTEQFKSVEDLLEVDFLITTSDGLETDFPLLQVHPILDFDDVLNMTHFAKYRSL
                     ADEKQVFAVELDKLLSGYIADGRTARELKQRLQKLITNELLTNLSSQDIETDLY"
     gene            complement(8285..8902)
                     /locus_tag="U1021_000565"
     CDS             complement(8285..8902)
                     /locus_tag="U1021_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017772020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711140.1"
                     /translation="MRKFLQDSLTEVAYYLELILSAILGLALLALSGLLLADLVGSLT
                     GGIQADNFIQSFLSKAMTLAVGVEFIKMLCKQSPSTVIEVLLVAIARQLIVEHGSSMD
                     YLIGIASVAILFAVRKYLFTQFDDSNNIIMRASQKVKVANIIARVKIPSEGSETLRDF
                     VTRKLNEEEKTIAIGACVYLKNVALRIDNMHGELITRVEIIKSIY"
     gene            complement(8985..9701)
                     /locus_tag="U1021_000566"
     CDS             complement(8985..9701)
                     /locus_tag="U1021_000566"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001934215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HEM4711141.1"
                     /translation="MPKDLQEMRQRVYEANIALPAHGLVKFTWGNVSEVCRELGRIVI
                     KPSGVDYEKLSPENMVVTDLDGNVVEGDLNPSSDLATHVALYKAWPNVHAVVHTHSTE
                     AVGWAQAGRDIPFYGTTHADYFYGPVPCARSLTAEEVNSAYEKETGSVIIEEFERRGI
                     DPVAVPGIVVRNHGPFTWGKDPAQAVYHSVVLEEVAQMNRYTEQINPRVEPAPSYIMD
                     KHYLRKHGPNAYYGQKGDEH"
     gene            complement(9701..10564)
                     /locus_tag="U1021_000567"
     CDS             complement(9701..10564)
                     /locus_tag="U1021_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase"
                     /protein_id="HEM4711142.1"
                     /translation="MARPIGIYEKATPKHFTWKERLEFAKELGFDFVEMSVDESDARL
                     ARLEWTKEERLDLVKAIYETGVRIPTICFSGHRRYPLGSNDPALEAKSLETMKQCIEL
                     AQDLGVRVIQLAGYDVYYEEKSPETRERFIKNLRQACDWAEQAQVMLAIEIMDDPFIN
                     SIEKYLAVEKEIDSPYLFVYPDTGNVSAWHNDIYSEFYLGHRSIAALHLKDTYAVTEN
                     SKGQFRDVPFGQGCVDWDNMFAVLKKTNYQGPFLIEMWSENCETVEETRAAIKAAQAF
                     LYPLIEKAGLN"
     gene            complement(10570..11232)
                     /locus_tag="U1021_000568"
     CDS             complement(10570..11232)
                     /locus_tag="U1021_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014622185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HEM4711143.1"
                     /translation="MKHIPNLQVALDHSDLQGAIKAAVSVGHEVDVIEAGTVCLLQVG
                     SELVEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICSATIPTMEAALKA
                     IKEVRGDTGEIQIELYGDWTYEQAQLWLDAGISQAIYHQSRDALLAGETWGEKDLNKV
                     KKLVEMGFRVSVTGGLDVDTLKLFEGVDVFTFIAGRGITEAANPAAAAREFKDEIRRI
                     WG"
     gene            complement(11243..11728)
                     /locus_tag="U1021_000569"
     CDS             complement(11243..11728)
                     /locus_tag="U1021_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM4711144.1"
                     /translation="MNLQKSFTENNSIRLGLTAETWQEAVHKAVEPLIDSGAATEEYY
                     DAIIASTEEYGPYYVLMPGMAMPHAQAGVGVLKDSFALITLTKPVAFSDGKEVSVLLT
                     LAATDPKIHTSVAIPQIIALFELENSIERLIACQTPEEVLAMVEESKNSPYLEGLDLE
                     S"
     gene            complement(11791..12069)
                     /locus_tag="U1021_000570"
     CDS             complement(11791..12069)
                     /locus_tag="U1021_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000241478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM4711145.1"
                     /translation="MVKVLTACGNGMGSSMVIKMKVENALRQLGVTDFQSASCSVGEA
                     KGLAAGYDIVVASNHLISELEGRTKGHLVGLDNLMDDNEIKTKLQAVL"
     gene            complement(12128..13576)
                     /locus_tag="U1021_000571"
     CDS             complement(12128..13576)
                     /locus_tag="U1021_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006153412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM4711146.1"
                     /translation="MDFLQTPLNWFSQNILQNPAFFVGLLVLVGYALLKKKPHDVFAG
                     FIKATVGYMILNVAAGGLVTTFRPILAALNYKFQIDAAVIDPYFGLAAANGKIAEEFP
                     DFVSAATTALLIGFGVNILLVALRKVTKVRTLFITGHIMVQQAATVSLMVLFLIPALR
                     NQFGTAAIGIICGIYWAVSSNMTVEATQRLTGGGGFAIGHQQQFAIWFVDKIAPKLGK
                     KEENLDNLKLPSFLNIFHDTVVASATLMLVFFGVILFILGPEIMANPEVITSGAPYNP
                     AKQAFFMYVIQTAFTFSVYLFILMQGVRMFVAELTNAFQGISSKLLPGSFPAVDVAAS
                     YGFGSSNAVLSGFAFGLIGQLITIVLLIVFKSPILIITGFVPVFFDNAAIAVYADKRG
                     GWKAAAILSFISGVLQVALGAVCVGLLELSGGYHGNIDFEVPWLPFGFAFKYLGIAGY
                     VLVCLFLLAIPQLQFAKAKDKEAYYRGEAQAE"
     gene            complement(13924..20229)
                     /locus_tag="U1021_000572"
     CDS             complement(13924..20229)
                     /locus_tag="U1021_000572"
                     /EC_number="3.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pullulanase"
                     /protein_id="HEM4711147.1"
                     /translation="MKKKSVQNMKRTGMLEKKQIFGIRKLNVGVASVGIAAALFLSGA
                     GQLVQAEEVVLPASTSSTTLSEQDGGAVEATTTAIEATDSMVAEATAVTETADATAPE
                     EAPIEEGSIRLHFENVDETAPESQGLWTWGGVAEPSDGNQWPTDTANFSSSQVDDYGH
                     YVDIKKSETPGTIGYLVLKNGEKITESDQKVELLVPEQNEAWIASDYSVSSYEPLKDE
                     NVLRINYTREDNNYEGWGVWTWGDTTEASSGWPAGAVDFKLGKYGAYVDIPLSNGLDS
                     KLGFLLINQNNPDLAGNKTIDLAFADRKRHSQIFLRNDDDKVYTNPYFIEEKVELDTS
                     KATPGTKNVTVGASVKAPFNYNESGLVSVTVTNPENAEIVKMEVDTSAIGGGLVPIST
                     ELNRVTIKATSSTAPGTYSLPVKVYDKDNGYYETKLDVTITERIKADGEKDWDEQVIY
                     FMMTDRFYNGDTGNDKLVEGTASNPRGLYQGGDFKGVTAKLDYLKELGVDSIWLTPIV
                     ENIPQNVGSVKDGEYYAYHGYWASNFEKLNPHLGSLADFHELIDAAAEKGINIIVDVV
                     LNHAGYGTEETFAGMVRTKEEDKQGDDQLGSLSGLPDFKTEEAAVRNQLVAWQASWLE
                     RSTTAKGNSIYAFRVDTVKHVDDTTWQHFKNELVDRDPDFHLIGETWGANYKDTKGDL
                     GIGTMDSLLDFGFKDIAKYLVNGQLKAAGKELEERSKVLTSAASLGQFLGSHDEDGFL
                     YSLGGAEKEGNLDKLKLAASLLITAKGQPVIYYGEEVGQSGQNNWPVYDNRYDFDWSK
                     VETSDITDHYQKLLAFRNANSTLLSRGDTSTLAGNDSQGWLISKRSYQDQAAYLVFST
                     NTENKEMALEVSGKDVVVTDAYTGKSYQAIEKDGKWVVQVELPTIGQGGTMLLQTEAG
                     DIVNASVQGATEEPIEAGYFRVHFKTLPSDNLSSLGLWTWDDVEKPSSDLGAWPTGAT
                     NFSTAKQDDYGYYLDIKMKDETASKISLLINNTSGDNITGDKTIERISTKMNEAWFDE
                     NYQLSLYQPLKEGCIRINYFRTDGNYDQKGLWIWGDVTDLTLGDWPNGIDFENQGKYG
                     AYIDVKLTDLPSSIGFLLLDESKSGDDVKIQQKDYSFKDLKNQTQIFLKDDDATIYTN
                     PYFVNNVRVTGVSHVNLTALEAAFTALEGADKDSILEKLSVTDKNGQTVAVTDLVLDA
                     TSNKVRVLGDFNQENAGYTLKYGNDSFTTTMSWQLKDELYAYDGELGARVRQAGSVVD
                     MTLWSPSADSVAVVLYDKDDQSKVVGKLAMTKGDKGQWNLELNSQSGLGIADYRGYYY
                     HYEITRGDQSVLVLDPYAKSLAEWNSDLADTDPSYRIAKAAIVDPAEVGPSDLNYATI
                     PNFNQREDAIIYEAHVRDFTSDPAISDELTAQFGTFAAFAERLSYLKDLGVTHIQLLP
                     VMSYYFVNELRNAERMSEYASSNSNYNWGYDPQSYFAFTGMYSIDPTDPMKRIEEFKN
                     LVNEIHKQGMGVILDVVYNHTSKTFLFEDLEPNYYHFMEADGTAKSSFGGGRLGTTHY
                     MSRRVLVDSIKYLVDEFKVDGFRFDMMGDHDAEAIELAFTEAQKLNPNIIMLGEGWRT
                     FTGDANQPVQPADQDWMSSTDTVAVFSDEIRNTLKSGYPNEGQPAFITGGIKSVESVF
                     NNIKAQPGNFLADDPGDVIQYIAAHDNLTLFDIIAQSIKKDPSVAENYTEIHQRQRLG
                     NLLVLTSQGTPFIHSGQEYGRTKQFLHPDYQYPVAEDQVPNKAHLLTNADGTPFDYPY
                     YIHDSYDSSDAVNKFDWTKATDEALYPENTRTQAFTKGLIALRKSTDAFRLGTKEEVE
                     QKVSLISIPGQNGIAKNDVVIAYQTIASNGDRYAVFVNADSKERSFVLSDIYKELLKG
                     HVLVDGKRAGIAALTDLVGMTLTDDAVVLAPLTATVIRLPYITTAVPDTAPTAEEKPS
                     LDFTTKERTEEKILPIVEEIRYDASLSTDQSYVLQEGKTGKKVLVYQDVLIDGKVVAT
                     NLLSETVVDSETRIVVKGSMEAKKEAEKPSLSTTAQASGQATSGASKASLPITGDRQS
                     DLALLGLGLAGLGLTVAAQGRTKKSEE"
     gene            complement(20411..21352)
                     /locus_tag="U1021_000573"
     CDS             complement(20411..21352)
                     /locus_tag="U1021_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM4711148.1"
                     /translation="MTTLADVARLANVSKMTVSRVINHPEQVTQELRTLVTAAMEELN
                     YKPNVAAKALAQQRTLIVQAVILEKMDVVEPYYIDLLAGIADELNHRNYTLQLVTNPS
                     QITDQCDGYIVTGARKDDYPWLKGLRKPLILFGENQEGLPFVDSDNRLATRSATQFAL
                     SKGYERIVFVGIDLPEAFEKGREEGYKDAMQGRETHLYRLENRSRVAEEFVKNLDYLP
                     ENTCFICASDRLALGVTRGLQALGKSIPNDVGVIGFDGFFLDRMSRPALTTMKQPIRQ
                     MGALSVKHLMTILDGKPLARQGHYCQATLIERETTPQ"
     gene            complement(21717..22463)
                     /locus_tag="U1021_000574"
     CDS             complement(21717..22463)
                     /locus_tag="U1021_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM4711149.1"
                     /translation="MIQASGVKLTFGGQQVLKGIDVEVNPGEVVVILGPSGSGKTTLL
                     RSLNFLEKADAGHLVFGEDSYDLAQMTKKEIAGIRKRTAFVFQNYNLFANKTALQNVT
                     EGLIVARKVPKQEAERIGKAALDKVGLSDKYGFYPSQLSGGQQQRVGIARAIATNPEV
                     IYFDEPTSALDPELIGEVLAVMMQLAKEGMTMVVVTHEMGFARAVADRVIFMDGGRII
                     EEGRPEDIFDRPQEERTKQFLARIQKVDVE"
     gene            complement(22473..23132)
                     /locus_tag="U1021_000575"
     CDS             complement(22473..23132)
                     /locus_tag="U1021_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM4711150.1"
                     /translation="MTERVWQLLLDSFSQILVPGLLVTIPLTILSFTFGLLIAIGTAL
                     VQIAQIPILKQVARFYIWVVRGTPLLVQLYVIFFGLPSLGIVLDAFPSAVLVFSVNTG
                     AYAAETIRASIESVPKGQLEAGYSVGMSFAQTMRRIILPQAFRVAFPPLSNTLIGLVK
                     DTSLAANITVLEMFMATQQIAARTYEPFALYCEVALVYLLFSTILTKLQAYGEKKLAV
                     Y"
     gene            complement(23145..23948)
                     /locus_tag="U1021_000576"
     CDS             complement(23145..23948)
                     /locus_tag="U1021_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM4711151.1"
                     /translation="MKKIAMFTSLLYAGIVLAACNSSAGTSNSTDQTLLAQIKEEGVI
                     QIGTEGAYAPYSYHDESGKLVGYDVEVAEAVAEKLGVKVEFVETEWDSMIAGLDAARF
                     DTIANQVGITDERKAKYDFSTPYTYIYGALVTQKDNTDITGFADLSGKKSVNSLTSNW
                     ANLARENGAEVVGVDGFSQAVELLNTGRVDATINDNLVYLDYVKQHADAPIKVVTLTD
                     DVSTTAFPVAKGNEDLVKEIDAALAELASEGKLAEISNKYFGEDVSKAK"
     gene            complement(24096..24418)
                     /locus_tag="U1021_000577"
                     /pseudo
     CDS             complement(24096..24418)
                     /locus_tag="U1021_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027949.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         6724 a         5749 c         4897 g         7213 t
ORIGIN      
        1 gagccagaaa aactgaccgt ttccgatcag tttggtttta ttacaaacgt gcgttcaatt
       61 ctgcaccgag ttcttcaaat cctggttttc caagaagagc aaacatgttt ttcttgtagg
      121 cttctacacc tggttggtca aatgggttaa tcgcattgag gtaaccagag atagcaatcg
      181 ccaactcgaa gaagtagaaa gtgtaaccaa gtgtgaactc atcttgttgt ggaagggtca
      241 caaacatgtt tggtacgcca ccatctgtgt gggcaagaag tacgccgtcc gttgcttttt
      301 tgtttacaaa gtcaacgtcc ttaccttgca agtagccaag accgtcaagg tcttctgcca
      361 tgtcaggaat gaggatattt tttcttggtt tgtcaacacg aaccactgtc tcaaagatat
      421 tgcggtttcc ttcttggata aattgtccaa gtgagtgcaa atctgttgag aagtttgcag
      481 atgttgggtt gatacctttt tggtccttac cttctgactc gcccgccaat tgtttccacc
      541 actcgctgaa gtattgcagt gatggctcgt agttagccaa gatttctgtc acatagcctt
      601 ttctgtaaag aatgttacgc actgcagcgt attggtatgc ttggttttca gcaatcttat
      661 cagatgtaaa tgtcgtgcgg gctgcgtttg caccttccat aagggcatca atgtctgcac
      721 cagctgccgc gattggcaat agaccaactg ctgtcaagac agagaaacga ccgccgacat
      781 catctggaac tacaaaagtt tcccaaccat ttgcgtccgc ttcaacctta actgcacctt
      841 ttgccttgtc agttgtcgca tagatacgct tgttggcttc ttcttgaccg tatttcttga
      901 caagtaattc tttgaagacg cggaaagcaa tcgcaggctc agttgttgta cctgattttg
      961 aaatcacgtt aactgagaaa tccttgtcag caacataatc caccaagtca gcaagatagc
     1021 ttgatgagat agagtttcca gcgtaaagga tttgtggagc tttgcgctct tcacgtgttt
     1081 gcaagtttac aaaggcattg ctcaagaaat caatagctgc tttagcacca aggtaagaac
     1141 caccgatacc gataactacc aaaacttcac tttcattttg gattttagct gctgcttcct
     1201 tgatacgagc aaactcttct ttgtcgtagt tttctggcaa atccaaccag ccgataaagt
     1261 cgctaccagg acctgttcct tgacggagca tttggtctgc aagggtaact tgtggttgca
     1321 tgtattctac ttcttgagct ccaacgaatt ggcccaagac ttttgaataa tcaaatgtaa
     1381 tatgtgtcat gtttttcctc catttatgta ccataatatg ataacgcttt atcatatttt
     1441 tttcaagaaa tttatcaatt ttcatttatt ttcatgaaat atgttgtata aatcttaatt
     1501 tttgtgaaaa tctaacgaaa ttttcgcgtt tgtaataatc ctccaaagtc tctcccgact
     1561 gggttactgt aatccatttc gggagaatct tagatagtag gtaaagcgga atgagggcag
     1621 gataccaaat gaacatgact tcaaagatga accggtcgtt gttgcccctt gaaatgtaac
     1681 gttggcggta ttcttctttg agagaagggt ggggaatata gatatgaaat ggcacaccac
     1741 cgcgtataga catggccagc aacattctca tcagaaaatt cagcgctact aggactgtct
     1801 ttccttgtct atgaagagta taggccttat tgacatagat tgttttatag cgtttatcct
     1861 tcagtgggcg tttggtggat tttcgctcct ctttcgttaa atgacgaaca ctgctattat
     1921 cgtacttaat gtcggacatt tctaagtcca caacatctgt atatttctta gcaagtgtcg
     1981 tttttcccat acctggaaag gcaaataaaa acataggctt tcctccttat tcctcagtag
     2041 aatagcagag catccaaaaa gttttcttaa gttgccccta ttttgcccct catttctaaa
     2101 aataaaccaa agaaaaaacc tctgaaatcc tgatttcaaa gggtttttag attatatgca
     2161 aaaagagcac acattcgacc tcgcttaggg ctgctggatt cctcccctga cccgcttcac
     2221 gcacgaatgt tgctccgttt aatattataa cacaatttgg ccagagtgca agcttgggaa
     2281 tattaactag ctatccgaaa ttgcttcctc ttgcgtcttc atgataagtt tagcagcctt
     2341 ctgactttct ctgcgttgtc tgaaaaaatc ttgcatgata ttggcacatt ccgcttctaa
     2401 aatacctgtt tctaccttga cacgatggtt gagccgctca tctgtcagaa tgtcatagag
     2461 gctccctgca gctccaaact ttttgttggt tgctccatag atgacctgcg gaatgcgtgc
     2521 taagccaata gctccgctac acatcacaca aggttcaatc gtcacaaaaa gggtcgaatc
     2581 aagcaagcgc caattcccct caacattgtt agcctcttgg attgccataa cctcagcgtg
     2641 catgattgcc tgattgagtt cctcacgcgc attatgccct ctgccaataa tctggccatc
     2701 cttgacaatc acacaaccaa ttggaatttc atccttttct agcgactttc tagcttcctg
     2761 caatgcttga gtcataaaat actctttttc ttcatgtgta tagttcataa atctattata
     2821 gcacagccct gataacagtt caaaatcact tctttatact ctgctatcaa aatcaatcta
     2881 acactacttc ttccttatca cacatttctt tcaaaattct gcccttctat taacttaaaa
     2941 atataaaaat acctcctcag tcgagaaggt agggggagca atattgatat ttacagatat
     3001 taatatacca tctattatcg atattgtcaa gaaaattttt aaaaaaatgt caaaaacagc
     3061 ctcgaaaggc tgtctctgac attttctatt acaattcgcc aactaatttc acaacatttt
     3121 ctactgtgaa gccgtagttg tcaataactg tttgggctgg agctgaggca ccgaatgtgt
     3181 cgataccaag gactttaccg tcaagaccga catacttgta ccaactttga gttgcaccca
     3241 tttcaattgc caagcgacga cggatggcat ttggtaggat ttcttccttg taggcagcat
     3301 cttgtgcatc gaagagttca gttgatggca cagaaaccac acgaacctta gtgcctgcta
     3361 cttctagttc tttggcagct ttaacagcca agttcacttc tgaaccagat gcaagaagga
     3421 ttgtatcaaa gcctgctgct tcatagacaa cataagcccc ttttgcaacc ttgtcaaagt
     3481 ctgtaccttc ttcaactgtc aagttttgac gagtgagaac aagggctgat ggtgtagact
     3541 tgctagtcaa tgacaagtac caagctgcct gtgtttcacg cgcatctgct gggcggaaga
     3601 cattgaggtt tggcatagca cgaagtcctg ccaagtgctc aatcggctcg tgagttggac
     3661 catcttcacc gactgcgatt gagtcatgag tgaagacata agtcacagga agtccttgaa
     3721 gagctgacaa acgaactgct gcttttacat agtctgagaa gacgaagaag gtaccaccat
     3781 agacacgaag tccgccgtgg gctgccatac cattcaagat agtacccatg gcaaattcac
     3841 gcacaccgaa ctggatattg cggttgagtg gatttactga atcttgcaaa ccatcttcct
     3901 tgatataggt catgtttgag tgagccaagt cagctgaacc acctaagaaa gttggcaata
     3961 ctttagccgc tgcgttgagg gcatcttgtg atgagttacg agttgcttgt gagaagccat
     4021 tttcgtaaac cgggaagtct tctggcttga tttcgactac atcacgacct tccaagatag
     4081 ctgttacttc agctgctaat tctggatgag ctactttgta gtcttcaact aattttaccc
     4141 aagcatcgta ggctgctgca ccgcgatcag ctacattagc tttgaagtct gcatagactt
     4201 cagctggaat ttcaaatggt gcatagttcc aatcaagcgc cttacgagtt gcttctgttt
     4261 cttctgcacc aagtggagca ccgtgaacgg catttgtacc ttgtttgttt ggcgaaccat
     4321 gaccgataac agtcttgatt tcgataagag atggcttacc agctactttt gccttttcaa
     4381 tagcagcaaa gatggcatct acatctgtac cgtctgttac gaggtctgta tgccagccat
     4441 aagcattgta acgggcacgt acgtcttctg tgaaggagtc ttttgtttcg ccatccaagt
     4501 tgatgtcatt tgaatcgtaa agaacgatga gtttttctaa tttttgaaga cctgcgtaag
     4561 aagccgcttc tgctgagaca ccctccatca agtcgccatc accacagatt acgtaagtat
     4621 agtggtcaaa gattgggaaa ccatcgcggt tgtacttagc tgcaaggaaa cgctctgctt
     4681 gcgcaaaacc cgtcgcagtt gagatacctt gtccaagagg ccctgttgtt gcatctacac
     4741 ctgctgtgtg accaaattct gggtgacctg gtgtttttga accccattga cggaagttct
     4801 tgatttcatc catagtgaca tcttcaaatc ctgacaaatg aagaagtccg tagaggagca
     4861 ttgacccatg acctgctgat aagataaagc ggtcacggtt cacccagttg ggctgagctg
     4921 ggttgatacg aagttcttta gtaaaaaggc tgtaggccat tggagccgca cccatgacga
     4981 cacctgggtg acctgatttt gatttttcga tggcatcaat accaaggaaa cgaagcgcat
     5041 tgactgaaag atttgacatg tttttctcct tttttaaagt catgaattta ttataccata
     5101 aagcgttttc tatgtctgtt tgaaatgaag cgagaaataa attgtccgta gaaaagaggc
     5161 aggactttcg tcccgccctt ggagtgaaca gtagtaattc gcacatttca tactttatca
     5221 gagtttatag tgcctctcct cgtctctatg gggcaagaga gttctaaatc ttataacaaa
     5281 gccttaaatt gaatatttga gtcttctaag aagcaatcgt caaagccacg tgggtggtga
     5341 tattcgatac agtccttgtc aagtgggtaa gtatacttgc caccaacttc ccagatgaat
     5401 ggatggaaat catattgcaa gcgttcctta cgcattttcc agagctgcaa gatttcatct
     5461 gttgacgcca tgaagttaga ccagatgtca tagtgaacag ggataatcac cttagcacgc
     5521 aagttttctg ccatccggag aaggtcgatt gaggtcatct tgtcctggat accgattggg
     5581 ttgtcaccgt agttgttgat agcaacgtcg atgttgaagt cacgaccgtg ttttgcaaag
     5641 tagtttgaga agtgggagtc tgcaccgtgg tagatggttc cgccaggcgt ttcaaagaca
     5701 tagttgactg ccttgcgagc catgagttca tctgtcacag gaagtcctgc taatttacca
     5761 ccattttcgt cataaccttc gattggcaag gtcaccaagc aagtacggtc gaaggattct
     5821 acagcatgga ccttgatgtc tttgaattca aagctatcgc ctggtgcgat acggatgata
     5881 cggtcagctg gaacacccca tttttcccag atgtcgccac tttcaactgg accgacaaat
     5941 ttgacgtggt ccaatttagg attgttgatg atggcagcgg cagtgctgat atccatgtgg
     6001 tcgctgtgga cgtgcgatac taggtagtag tccaattcat tgatggcaaa tggatcgata
     6061 accattggct gcacacgcaa gtttggttgc aatttgcgca caccggccat attagccatc
     6121 tggtgtcccc aaaccatatc tttcactttt ttagtggatt tcccacgtga tgaccagagg
     6181 tccatgacca cgttagctcc acctggtgtt ttaatccata caccgcagtt tccaagccac
     6241 cacatagcaa agttgccttc tggcactact tcttcttcaa tttcttcatt gagccaagtt
     6301 ccccattctg ggaaggttga aagaatccag gattctcttg taatatcttg aactttagcc
     6361 attttccatt cctcctataa ggtacgtttc tatgcttcta gtatatgctc caaaggcaac
     6421 aaaaaaaaga ccaaataaaa cacaggcttg tgttcaaact tggactttac cctaatacag
     6481 atctgtttca atatcttgac tggataaatt ggttaataat tcattggtaa tcagcttttg
     6541 tagccgttgt ttgagttctc gagcggtcct tccgtctgcg atatatcccg atagaagctt
     6601 gtctagttct actgcaaaaa cttgtttttc atctgccaaa ctacgatatt ttgcaaaatg
     6661 agtcatgttt agcacatcat caaaatctaa aatggggtga acctgcagca aagggaaatc
     6721 cgtttccaac ccatcgctgg ttgtaatcaa gaaatcaacc tctagtaagt cctcgacact
     6781 cttgaattgt tcagtggtaa agacggcgcc aatcttctta tctggcaagt gatgctggca
     6841 ttgtttataa agtaagcgtt ggactgacac cccttcatca cagattaaat agacaatctg
     6901 tgtctgtgcc ttgcgcgtcc cactgcgtcg aatagcccct cctagatgaa tcgtcaaata
     6961 ggcaatatct ccatcggata actcaatctg ccactcctcc tccaaaatct ttccagaaac
     7021 ccgtgtcata gcaaacaggg tgccgtattt atcttggatt tgttggacca ttggattttt
     7081 agataggatg ccgtaggttt ttctgaacaa cagagccttg caatgtgcca agagatgttt
     7141 ggctaattcg tcaggatttt ccaattcaaa tggtgaatgt atctcaaaat gatgaataaa
     7201 tcgctccact acacgcttca agtcaatgaa atcttgactg aatacatgaa catcgctatc
     7261 ctttcgatag gatagaagta aaatggcaat cagggagatt tctatttcat ccaatttcaa
     7321 atcaaaggtt tgcaacaagg catctttcaa ttcctgagca actcggtact cgatacgctc
     7381 tcgaacttgt tcaaattctt tgagaatggc tcgttcttcc aagtcatcca gctccatatt
     7441 gcgatagcta aggagcaaga aaggcaatac tttgagcata aactcgattt cgtagcgatt
     7501 gattttctta cccagtttct tttctagctg cgatacttgt ccctgtaaaa attgtgccat
     7561 ttcttctgag aagagcaact gacaccccac caactcaaat aacttatctt ctagaacctg
     7621 caaaaaacct ttattggcat ccaagaagat ggtatagaga agtgagtgga catattggat
     7681 tttatttaaa gggtgacaaa cgagactata gccatgactc ttagacacat agagggtcat
     7741 cttgtattgt tcttgagcca actgggttcg aatttcattc aaatcattta agaccgtatt
     7801 acgagaaact tctgtcaact ccattagccg ttcaatggtc actctttctg gtgtgataca
     7861 gatatatacc aacatcagct gaatgcgctc aggcatgctc atgacgtagg tgtacgaatc
     7921 aatggaatcg agaagatctc gacaggctag tttttgcgct tcggtaagtc gaataccgag
     7981 gcgaggtaag ctttcaatac tctctacagt tgttggtagg gcatcattga ttttttctag
     8041 atggtaatag atttttcgac gtgattgttg caagcccttg gaaatagcca tgattgtctc
     8101 aggttcctgt agaccaatca ggtacctcag tagagcgcaa ctactcttat ctaataacaa
     8161 gattctcctc ctctttcccc cgtcccgtta ctatcttaac ataattatct gggatattct
     8221 aataattatt aaaattcatc tgattattac ttgttttaca tcgcataaat atttgtagtt
     8281 agaattaata gatgctttta ataatttcta cccgggtaat cagttctccg tgcatgttat
     8341 ctatccgaag ggcaacattt ttcaaatata cacaggcacc aatagcaatg gttttctctt
     8401 cttcattgag ttttcgtgtc acaaaatctc tcaaagtctc actaccttca cttggaattt
     8461 ttactcgtgc gatgatatta gccactttta ctttctggct ggcccgcatg atgatattat
     8521 tagagtcatc aaactgggta aagaggtact ttctcactgc aaataagatg gcaaccgacg
     8581 caataccaat caagtagtcc atgcttgagc catgttccac aatcagttga cgggcaatgg
     8641 ccaccaagag aacctcgatg acagtactag gggattgttt gcagagcatc ttgatgaact
     8701 cgaccccaac cgccaaggtc atggccttgc ttaaaaaact ctggataaag ttatccgctt
     8761 gaataccacc cgtcagtgaa ccaactaaat ccgccaacaa caaacctgac aatgctagta
     8821 gggctaatcc taaaatggct gataaaatca actccagata gtaggcaacc tctgtcagac
     8881 tatcttgtaa aaactttctc atctttctcc tcatcaaaag agaaaaagca gttctccttt
     8941 ttggggagtc tgctactttt ccctactttt tttcacacaa gaacttaatg ttcatcacct
     9001 ttctgtccgt agtaggcatt gggaccatgt ttacggaggt agtgcttgtc catgatatag
     9061 cttggcgctg gctccacccg tggattgatt tgttctgtgt agcggttcat ctgagccact
     9121 tcttctagga caacactgtg gtaaactgcc tgagcaggat ccttgcccca agtaaatggc
     9181 ccatggtttc ggacaacaat acccggaaca gcaactgggt caatgccacg gcgttcaaat
     9241 tcctcgatga tgactgaacc tgtttctttt tcataggccg agtttacttc ctcagctgtc
     9301 aaagaacggg cacatggtac cggaccatag aaatagtccg catgagttgt cccataaaat
     9361 ggaatgtcac gacctgcctg agcccaaccc actgcttctg tcgaatgcgt atgcacgaca
     9421 gcatgtacgt ttggccaagc cttgtagagg gcaacgtggg tcgccaaatc agacgaagga
     9481 ttcaggtctc cttccactac atttccgtct aagtccgtaa cgaccatatt ttctggtgac
     9541 aatttttcgt aatctacacc agaaggcttg ataacgatgc gaccaagttc acggcagact
     9601 tctgatacat ttccccaggt gaatttgaca agtccatgag caggtagggc gatattggct
     9661 tcatagaccc gttggcgcat ttcctgtaaa tcttttggca ttagttcaac cccgctttct
     9721 caatcaatgg atagaggaaa gcctgcgctg ccttgatagc tgctcgtgtt tcctcaaccg
     9781 tttcacaatt ctctgaccac atttcaatca agaatggacc ttggtagttg gtctttttca
     9841 agacagcaaa catattgtcc cagtccacgc agccctgacc gaatggtaca tcgcggaatt
     9901 gacctttgga gttctcggtt accgcataag tgtctttcaa gtgaagggct gcgatggaac
     9961 ggtgtcccag gtaaaattcg ctataaatgt cattgtgcca agcagacacg tttccagtat
    10021 ctggatagac aaagagatag ggcgagtcga tttctttttc aacggctagg tatttttcaa
    10081 tagagttgat aaatggatca tccataatct caatggccaa catgacctga gcctgttctg
    10141 cccagtcgca agcctgacgg agattcttga tgaaacgctc tctagtttca ggtgattttt
    10201 cctcgtagta aacatcgtaa ccagccaact ggatgacacg gacacccaag tcctgagcca
    10261 gttcgataca ctgtttcatg gtttctagcg acttagcttc gagagcaggg tcattagaac
    10321 caagcggata acgacgatgg cctgagaaac agatagtcgg aatgcggaca cctgtttcat
    10381 agatagcctt gaccaaatcc aaacgctctt ccttagtcca ctccaaacga gccaaacgtg
    10441 catcgctctc atccaccgac atctccacaa agtcgaaacc taattctttg gcaaactcca
    10501 agcgttcctt ccatgtgaag tgtttgggcg ttgccttttc atatattccg attggtcgtg
    10561 ccataggctt tacccccaga tacgacggat ttcgtcttta aattcacgcg ctgcagctgc
    10621 tggatttgca gcttctgtga taccacgacc tgcgataaag gtgaagacat ctacaccctc
    10681 gaagagttta agggtatcca catcaagacc acctgttaca gaaacacgga agcccatttc
    10741 aaccaatttt ttcaccttgt tcaagtcttt ttcgccccac gtttcgccag caagaagggc
    10801 atcacgagat tggtggtaaa tcgcttggga aatacctgcg tccaaccaaa gctgagcctg
    10861 ttcataagtc cagtcaccgt aaagctcgat ttggatttca cccgtgtcac cacgcacttc
    10921 cttgatagcc ttcaaagcag cttccatagt tggaatagtt gctgaacaga tacaagtcat
    10981 ccagtccgca ccacgaacag cattgttttt agccacagta ccacccgcat ccgcacactt
    11041 ggtatctgca acgataattt tgtctgggaa gaggctacga agaacttcca ccaattcgct
    11101 accaacttgg agcaagcaaa ccgtacctgc ttcaatcacg tcaacttcat gaccaacgga
    11161 gacagctgct ttaatcgctc cctgcaagtc tgaatggtca agggcaactt gtaaatttgg
    11221 aatatgtttc atgttttttc tcctaacttt ctaaatctaa accttctagg taaggactgt
    11281 ttttggactc ttccaccatt gccaagactt cctcaggagt ttgacaagca atcaaacgct
    11341 cgattgaatt ttccaattcg aaaagggcaa tgatttgtgg aatagctact gaagtatgga
    11401 tttttggatc tgtcgcagcc aaggtcaaga ggacagaaac ctctttacca tctgaaaaag
    11461 ctactggttt tgtcaaggta atcaaagcaa aggaatcctt caagacgccg acacctgctt
    11521 gggcgtgagg catagccata ccaggcatga gcacatagta aggtccatat tcttcagttg
    11581 atgcgatgat cgcgtcgtag tattcctcag ttgcagcgcc gctgtcaatc agcggttcaa
    11641 cagccttgtg aacagcctcc tgccaggttt ccgctgtcaa tcccaagcga atggaattat
    11701 tttctgtaaa tgatttttgt aaattcatag tttttccctt ctacacgcta tatgaaaggg
    11761 ggagggaaac tccctacccc taacggctat ttatagcact gcttgtaatt ttgttttgat
    11821 ttcgttgtcg tccatgaggt tgtcaagacc aaccaaatga cctttcgtgc gaccttccaa
    11881 ctcagaaatc aagtggttag aggctacgac aatatcatat cctgccgcta aaccttttgc
    11941 ttcaccgact gagcaagaag ctgattgaaa atctgttacg ccgagttgac gaagggcgtt
    12001 ttctaccttc atcttgatga ccatagatga gcccatgccg tttccgcagg ctgttaaaac
    12061 tttaaccata atttcactcc tattttattt ttaatacatt atgctctgat tttacagacc
    12121 aaggatacta ttctgcttgt gcctcaccac gatagtatgc ttccttatct tttgctttcg
    12181 caaattgaag ttgcggaata gccaataaga agaggcagac aagaacataa ccagcaatac
    12241 ctaggtactt aaatgcaaat ccaaatggta accatggcac ttcaaagtca atgtttccgt
    12301 ggtaaccacc gctcaattca agcaaaccaa cgcagactgc accaagagca acttgaagga
    12361 cacctgagat gaaggaaagg atagctgccg ctttccaacc accacgtttg tcagcgtaca
    12421 ctgcgatagc tgcgttatcg aagaatacag gtacgaaacc agtgatgatg aggattggac
    12481 tcttgaagac aatcaagaga acgattgtaa tcaactgacc gattaaaccg aaggcaaaac
    12541 ctgaaagaac tgcattagat gaaccgaagc cgtaagaagc tgcaacgtcc accgctggga
    12601 atgaaccagg aagcaatttg cttgagatac cttggaaggc atttgtcaat tctgctacga
    12661 acatacgtac accctgcatc aagatgaaga gatatactga gaaagtgaag gctgtttgaa
    12721 tcacatacat aaagaaggct tgtttagctg ggttgtatgg agcacctgaa gtgataactt
    12781 ctggatttgc catgatttct ggacccaaga tgaacaaaat cacaccgaag aacacaagca
    12841 tcaatgtcgc tgaagcaaca actgtatcgt ggaagatgtt gaggaagcta ggtagcttca
    12901 agttatccaa gttttcttct tttttaccaa gttttggtgc aatcttatcg acaaaccaga
    12961 tcgcgaattg ttgttggtga ccgatggcaa atccaccgcc acctgtcaat cgttgcgttg
    13021 cttcaactgt catatttgag ctgacagccc agtagatacc acagatgata ccgatcgctg
    13081 ctgtaccgaa ttggttacga agagccggga tgaggaagag caccatcaat gagactgttg
    13141 ccgcttgttg taccatgatg tgtccagtga tgaacagagt acgtactttt gtaaccttac
    13201 gtagtgccac caagaggatg ttgacaccga aaccaatcaa gagagctgta gtggctgctg
    13261 atacgaaatc agggaactcc tcagcaattt tcccatttgc tgctgcaaga ccaaagtaag
    13321 ggtcaataac tgccgcatca atttggaact tatagttcaa ggccgccaaa atcggacgga
    13381 aggttgttac caaaccacca gctgctacgt tcaaaatcat atagccgact gtcgctttga
    13441 taaaccctgc aaaaacatca tgaggctttt tctttagaag ggcatagccc accaatacca
    13501 aaagacctac gaagaaggct ggattctgca ggatattctg tgagaaccag tttaatgggg
    13561 tttgaaggaa atccattttt cattctcctt ttttgaaatg atttttatgg ttttattata
    13621 agttatgtaa gcggaaacaa aaagaccaaa taaagcacag gcttgtgttc actattggac
    13681 tatttccgaa ctttaatggc tgatttaatc agaattcctt cctatagttc accagcccat
    13741 ttattctaat aatcaataaa tagacgttat tttacctaaa aatttaaaag aacctcaaaa
    13801 aacataaaag aagaggttgg tttgaaacca acctcttcta gagggaagtg atactctcaa
    13861 ctcttgtatt tataagacat tcacaaggtt ttgagtagtg ctcctctgga gagccaaata
    13921 ttattactct tctgattttt tagttcttcc ttgcgcagca actgtcaaac caagtccagc
    13981 aagtccgaga cctagaagtg ccaaatcgct ttgtcggtca cccgtaatcg gcagactcgc
    14041 cttgcttgca ccacttgtcg cttgcccaga tgcttgagca gtagtagaaa gactcggttt
    14101 ttcagcctct ttcttagcct ccatactgcc tttcacaaca atacgtgttt cgctatcaac
    14161 aactgtttct gataacaaat tagttgcaac taccttacca tcaatcaaga catcctgata
    14221 aaccagaact ttcttaccag ttttgccttc ttgaaggaca taagattgat cggtagagag
    14281 acttgcatca tagcgaattt cctctacgat aggaagaatt ttttcctctg tacgttcctt
    14341 ggtagtaaag tctagacttg gtttttcttc agcagtaggc gctgtatctg gaactgccgt
    14401 agtgatgtaa ggcaagcgaa tcactgtcgc agtcaacggt gcaagcacaa ctgcgtcatc
    14461 tgtcaatgtc atacctacca aatcagtcag cgctgctatt ccagcccgct taccatcaac
    14521 cagcacgtga cccttaagca attctttgta aatatcagaa agaacaaagc tgcgctcctt
    14581 actgtcggcg ttgacaaaaa cagcatagcg gtccccattg cttgcaatgg tttgataggc
    14641 aatgaccaca tcatttttgg caatgccatt ttgacctgga attgaaatca agctaacctt
    14701 ctgttcaact tcttctttcg ttcccaaacg gaaggcatct gtagatttgc gcaaggcaat
    14761 caatcctttt gtaaaggcct gagtacgggt attctctgga tagagcgcct catctgtcgc
    14821 tttggtccag tcaaacttgt tgaccgcatc cgatgaatcg taagaatcat ggatgtagta
    14881 tggatagtca aatggcgttc catctgcatt ggtcaacaaa tgcgctttgt tcggcacttg
    14941 atcttctgct acagggtact gataatcagg gtgaaggaac tgtttggtcc gtccatactc
    15001 ctgaccagaa tggataaacg gtgtcccttg agaagtcaaa actagcaaat tacccaagcg
    15061 ttgacgttgg tgaatttcag tatagttttc agcaactgac ggatccttct tgatggactg
    15121 agcgataata tcaaagaggg tcaagttatc atgcgcagca atatactgga tcacatcacc
    15181 tggatcatct gccaagaaat tacctggttg tgccttgatg ttattgaaga cagattctac
    15241 actcttaata ccacctgtga taaaggctgg ctgaccttcg tttggataac cagatttaag
    15301 tgtattgcga atttcatctg agaatactgc aaccgtatct gttgaactca tccagtcttg
    15361 gtccgctggc tgaacaggct gattggcgtc gcctgtaaag gttctccatc cttcaccaag
    15421 cataatgatg tttggattga gtttttgtgc ctcggtaaag gccagctcaa tcgcttcagc
    15481 atcatggtcc cccatcatat cgaagcggaa accatctacc ttaaactcgt ccacaagata
    15541 cttgatggaa tcaactaaga cacggcggct catgtagtga gtggttccca gacgaccccc
    15601 accaaagcta gatttagctg taccatctgc ctccatgaag tgataatagt ttggctctaa
    15661 gtcttcaaat aagaaggtct tagaagtgtg gttatagacc acatccaaaa tcacccccat
    15721 gccttgtttg tggatttcat tgaccaggtt tttgaattct tcgatgcgtt tcattggatc
    15781 ggtcggatct atagaataca tacctgtaaa ggcaaaataa ctctgtggat catagcccca
    15841 gttgtagttg ctgttgcttg atgcgtactc actcatccgc tctgcatttc tcaattcatt
    15901 gacaaaatag tagctcataa ctggtagcaa ctgaatatgg gtcacaccca agtctttgag
    15961 gtagctgagt cgctctgcaa aggccgcaaa ggtgccaaac tgagctgtca attcatcaga
    16021 aatagcagga tcggatgtga agtcacggac atgagcctca tagataatag catcttcacg
    16081 ctgattgaag ttaggaattg tggcatagtt caaatcactt ggaccaactt ctgctgggtc
    16141 cacaatcgca gcttttgcaa tccgataaga tggatctgta tctgccaaat cactattcca
    16201 ctccgctaaa gacttagcat atgggtctaa aacaagaaca gattgatccc cacgagtgat
    16261 ttcataatgg tagtagtaac cacgatagtc cgcgatacca agacctgatt gactgttcaa
    16321 ttcgaggttc cattgtccct tatcgccctt ggtcatggct aatttaccga ccaccttaga
    16381 ctggtcatcc ttatcataaa gaacaactgc tacactgtct gcacttggcg accagagagt
    16441 catatcaacg acactaccag cctgacgcac acgcgcacca agctccccat cataagcata
    16501 tagctcatcc ttcaactgcc agctcatagt tgttgtgaag ctatcattgc catatttaag
    16561 ggtatagccc gcattttctt ggttgaaatc cccgaggact cgcaccttgt tgcttgttgc
    16621 atccaagaca aggtccgtca cagcaactgt ctgaccattc ttatctgtta cagacaattt
    16681 ctccaagatg ctatccttat ccgcaccttc caatgctgta aaggctgctt ctaaggctgt
    16741 taggttaacg tgagaaacac ctgtcacacg gacattattg acaaaataag ggttggtgta
    16801 aatagtcgca tcatcatcct tgaggaagat ttgtgtctga tttttcaaat ctttaaagct
    16861 ataatctttc tgctgaatct tcacatcgtc tcctgacttg ctttcatcca atagcaagaa
    16921 gccaatggaa cttggtaaat ctgtcaattt gacatcgata taggcaccgt acttgccttg
    16981 gttttcaaaa tcaataccat ttggccagtc acccaaggta aggtcagtca catcacccca
    17041 aatccagaga cctttttggt cataattgcc atcggtacgg aagtaattga tacggatgca
    17101 gccttctttt agaggttgat agaggctgag ttggtagttt tcatcaaacc aagcttcatt
    17161 catcttggtg ctaatccgtt caatggtctt gtcacctgtg atgttatcac cagaagtgtt
    17221 attaatcaac agactaatct tgctggctgt ttcatctttc atcttgatgt ccagataata
    17281 gccataatca tcctgcttag cagtactgaa attggttgca cctgttggcc aagcaccaag
    17341 atctgacgat ggtttttcga catcatccca tgtccataaa cctaggctag ataaattatc
    17401 agatggtaga gttttaaagt gaacacggaa gtaacctgct tcaattggtt cttcagttgc
    17461 tccttgcaca cttgcattga cgatgtcacc tgcttctgtc tgaaggagca tggtgccacc
    17521 ttgaccgatt gttggcagtt cgacttgaac aacccattta ccgtctttct cgatagcttg
    17581 ataagatttt cctgtgtagg catctgtgac aactacatct ttaccagata cttcaagcgc
    17641 catttccttg ttctcggtat tggtcgagaa gacaagatag gcagcttgat cttggtaact
    17701 gcgtttgctg ataagccaac cttggctatc atttccagca agtgtgcttg tatcaccacg
    17761 tgagagcaat gttgaattgg cattgcggaa agccaataat ttctgatagt ggtctgtgat
    17821 gtcgctagtc tctaccttgc tccaatcgaa atcgtaccgg ttgtcataaa ctggccagtt
    17881 gttttgtcca gattgcccca cttcttcacc gtagtaaatg accggctgac ctttagcagt
    17941 aatcaaaaga ctagcagcca atttcagttt gtccagattt ccttcttttt ctgcgccacc
    18001 gagactgtag aggaaaccat cttcgtcgtg actgcccaag aattgaccca gagaagctgc
    18061 actagtcaga accttgctac gttcttccag ctcttttcca gctgctttta gttgaccatt
    18121 gaccagatat ttggcgatat ccttgaagcc aaagtccaac aaactatcca tagtgccgat
    18181 acccaagtca cccttggtat ccttataatt cgctccccaa gtttccccaa tcaagtggaa
    18241 gtcaggatct ctatccacca attcattttt gaaatgttgc catgtggtat catcaacgtg
    18301 tttgactgta tcgacacgga aagcatagat agagttgccc ttggcagttg ttgaacgttc
    18361 caaccaagat gcctgccaag caaccaactg attgcgaaca gcagcttctt ctgtcttgaa
    18421 gtctggtaat ccagataatg agcctaattg gtcatctccc tgcttgtctt cttccttagt
    18481 ccgtaccata cctgcaaagg tttcttctgt gccatagcca gcatggttaa gcaccacgtc
    18541 aacaataata ttgatgcctt tttcggctgc ggcatcaatc aattcgtgga aatcagctaa
    18601 acttcccaaa tgcggattta gtttctcaaa attggatgcc caataaccat gataagcata
    18661 gtattctcca tcttttacgc taccaacatt ctgtggaata ttttccacaa tcggagtcaa
    18721 ccagatagag tccacaccca attctttcaa gtagtccagc ttggctgtca ctcctttgaa
    18781 gtcaccgccc tggtaaagac cgcgtgggtt ggaggctgtt ccttccacta gcttgtcatt
    18841 gccggtgtct ccattataga aacggtctgt catcatgaag tagatgactt gctcgtccca
    18901 gtctttttca ccatctgcct tgatacgctc tgtaatggtc acatccaatt ttgtttcgta
    18961 gtaaccgttg tccttgtcat agacctttac aggaagacta tatgtccctg gcgctgtgct
    19021 agacgtcgct ttaatggtca cacgattgag ctcagtagag attggcacaa gacctccacc
    19081 gatggcactt gtatcgactt ccattttgac tatttcagca ttttcagggt tggtgacggt
    19141 tacagatacc aagccacttt cattgtagtt gaatggtgct ttcacacttg ccccaacagt
    19201 cacatttttt gtacctggag tagctttact tgtatcgagt tctactttct cttcgataaa
    19261 atatggattg gtatagactt tgtcgtcgtc attgcgaagg aaaatttggc tatgccgttt
    19321 acgatctgca aaggctaaat caattgtttt attgcctgcc aaatctggat tattctgatt
    19381 gattagcaga aatccaagct tggaatctaa accattcgat agaggaatgt caacataggc
    19441 gccgtatttg ccaagtttaa agtcaacggc acctgctggc cagccgctac ttgcttcagt
    19501 cgtatctccc caagtccata cgccccaacc ttcataatta ttgtcttcac gggtgtagtt
    19561 gatacggagg acattttcat ctttgagtgg ctcataacta gacacgctat aatcactagc
    19621 aatccaagcc tcattttgtt ccggaacaag tagctccact ttctggtccg attctgttat
    19681 tttttcccca ttcttgagaa ccagataacc aatcgttcct ggtgtctcag attttttaat
    19741 atcaacgtaa tggccgtagt catctacctg actgcttgaa aagttcgctg tatccgttgg
    19801 ccattgattg ccatcggacg gctctgccac tcctccccaa gtccaaagtc cttgactttc
    19861 tggtgctgtt tcatctacat tttcaaagtg cagacgaatg ctgccttctt cgataggagc
    19921 ttcctctgga gcagttgcat cggctgtttc tgttaccgct gtcgcttcag ctaccataga
    19981 atctgtagct tctatcgcag ttgtggtcgc ttctaccgcg ccgccatcct gttccgaaag
    20041 agtcgttgaa ctagttgacg cagggaggac aacttcctct gcctgcacta gttgacctgc
    20101 tccacttaaa aacagagcag ccgcaatccc aacagaggct acacctacat ttagtttacg
    20161 aatgccaaaa atctgtttct tctctagcat ccctgttcgt ttcatattct gaacggattt
    20221 ctttttcata gactcctcca tataaataag tttgaattgt acactaccag tatatacaat
    20281 tccaaggagt ctttgcaaac gttttcttaa atgttaacgg taacaagttt taagctacta
    20341 tctaacaaaa atagaataaa tagctccccc ttcttttgct cctagaccgc ccactgacca
    20401 aaaaaagaga ctactgaggt gtagtctctc tttcaattaa agttgcctgg cagtaatgcc
    20461 cctgtctagc cagaggcttg ccatccaata tcgtcattaa atgtttgacg ctaagagccc
    20521 ccatttgacg aatcggctgc ttcatcgtcg tcaaggctgg cctggacatc ctatctaaaa
    20581 agaagccgtc aaaaccaatc accccaacgt cattcggaat agactttcct agagcttgta
    20641 aacctcttgt aaccccaaga gcgagacgat ccgatgcgca gataaagcag gtgttttctg
    20701 gtaaataatc aagatttttc acaaattctt ccgcaacacg agaacgattt tccaatcgat
    20761 agagatgagt ttctcggccc tgcatcgcat ctttgtaacc ttcttctctc cctttttcaa
    20821 aggcttctgg caagtcaatc cctacaaaaa caatcctctc ataacctttt gataaagcaa
    20881 actgagttgc ggacctagtc gccaaacgat tgtctgaatc tacaaaagga aggccttctt
    20941 gattctcccc aaataaaatc aatggcttcc gcagcccttt caaccaaggg tagtcatcct
    21001 tgcgagcgcc agtcacaatg taaccatcac attgatcagt aatctgactt ggattggtca
    21061 ccaactgcaa ggtataattt cgatgattga gctcatcagc gattcctgca agaaggtcga
    21121 tatagtacgg ctctaccaca tccatctttt cgagaatgac agcctgaaca atcagtgtcc
    21181 gttgctgggc caaggccttg gccgccacat ttggcttata gtttaattct tccatcgcag
    21241 ctgttacgag cgtccgcagc tcttgtgtaa cttgttctgg atggttgatg acacgcgaaa
    21301 cagtcatctt tgatacattg gctaacctag ccacatcggc taatgtcgtc atagaactcc
    21361 tccctaattc tatttctgtt gcttatcttt tagcaagcaa acagtcaaaa ttgtgcaaac
    21421 gttttcttta ggttattata tactatttat tactaaaaag taaagacctt tcgaatacat
    21481 ttatcgtcat ttagttttcc ttctattact tccttagctc ccttgcctaa cttcatctat
    21541 gcctgcggtt catcgcctcg tgctaaaagt actatctaag aatacccatt ccctctaaac
    21601 aaaaaatact ccaaccgcta gaccaatcaa tgtctaacaa ttgaagtatc tttgtcaaat
    21661 tctgtccatt ttctatacga ttatggaaat gaatgagata aattaatttg cttagcttac
    21721 tcaacatcta ccttttgaat gcgagctaag aattgcttag tacgttcttc ttgtggacgg
    21781 tcaaaaatgt cttctggtcg accttcttcg ataatccgac caccatccat aaatatgact
    21841 cgatcagcta ccgcacgcgc aaagcccatc tcgtgcgtca caaccaccat ggtcatacct
    21901 tcttttgcca actgcatcat gacagccaag acctcaccga ttaactcagg atccaaggcc
    21961 gaggttggtt catcaaaata aatgacctct ggattggtcg caatggctct ggcaatgccg
    22021 acccgttgct gctgacctcc tgatagctgg cttggataga aaccatattt atcagatagt
    22081 cccaccttat ccaaggctgc tttaccgatt ctttcagcct cttgtttggg tactttccga
    22141 gccacaatca gaccttccgt cacattttgt aaagcagtct tgttggcaaa gagattatag
    22201 ttttgaaaaa cgaaggctgt gcgcttgcga atgcctgcaa tttccttctt ggtcatctga
    22261 gccaagtcat agctgtcctc accgaagact aagtgacccg cgtcagcttt ttccaaaaag
    22321 tttaaagaac gaagaagagt cgtttttcct gatccagacg gacctaaaat gacgaccacc
    22381 tcacctggat tgacctctac atcaattcct tttaacacct gctgaccacc gaaggtcagc
    22441 tttactccac ttgcttgaat catctgaacc tcctagtaaa cggctaattt cttctcacca
    22501 taggcttgaa gcttggtcaa aatggttgaa aagagtagat acacaagggc cacctcacaa
    22561 tagagggcaa acggttcgta ggtccttgct gcaatctgct gagttgccat aaacatctcc
    22621 aagacggtaa tattggcagc cagcgatgta tccttgacca atccaatcaa ggtattggac
    22681 aagggcggga aggccactcg aaaggcctgt gggagaataa tccgacgcat ggtctgggca
    22741 aaactcatcc cgacagaata gccagcctcc aactgcccct taggcacgga ctcgatagaa
    22801 gcccgtatgg tttccgcagc gtaggcacct gtattgacag aaaaaaccaa aaccgccgac
    22861 ggaaaggcat ccaagacaat tcctagactt ggtagcccaa agaatatcac atagagttga
    22921 accaagagtg gtgttcctcg aacaacccaa atatagaaac gagccacttg tttgagaatg
    22981 ggaatctgag caatttgcac caaagccgtc ccaatagcaa ttaacaagcc aaaggtaaaa
    23041 gacaggattg tcagtgggat agtcaccaac aatcctggaa caagtatctg tgaaaatgaa
    23101 tcaagcaata gttgccatac tctttctgtc attgtttctc ctgattactt agcttttgat
    23161 acgtcttcac caaagtattt gtttgaaatt tcagctaatt ttccttcact agccaattct
    23221 gccaaggctg catcaatctc tttcacaaga tcttcatttc cttttgcaac tgggaaggct
    23281 gttgtcgata cgtcatccgt caaggtcaca accttaatcg gtgcatcagc atgctgtttc
    23341 acataatcca agtacaccaa gttgtcattg atggtagcat ccacacgccc tgtatttaac
    23401 aattcaactg cctgagagaa tccatccaca ccgacaactt ctgcaccatt ttcacgcgcc
    23461 aaatttgccc agttacttgt caagctgttg actgattttt taccagataa atctgcaaag
    23521 cctgtaatgt cagtattatc tttttgcgtc accaaggctc catagatgta tgtatatggt
    23581 gttgaaaaat cgtattttgc cttacgctca tctgtaatac cgacttggtt agcgatagta
    23641 tcaaaacgag ctgcatccaa acctgcaatc atggaatccc attctgtttc aacaaattcc
    23701 accttgacac ccaatttctc agcaacggct tctgctactt ctacatcata accgaccaat
    23761 tttccgctct catcgtggta agagtaagga gcataggcac cttcagtacc gatttgaata
    23821 acgccttctt ccttaatttg tgccaagagg gtttggtctg tactattcga tgtacctgca
    23881 gatgaattgc aggctgctaa cacgatacct gcatacaata aacttgtaaa catagctatt
    23941 ttcttcataa ttaaaacaca ctttcttttt cagattttac aatagtatca tgaataacaa
    24001 tttccagcca atatattttt tctatcgggg acattaaaaa ttttaatcaa gtatcggagc
    24061 ataaaaaaag acctactcgg tctttatatc tcatattaat ttactccagc tggtgggtaa
    24121 atatagctga ctgttccttc gctagtcgtt gttggatcaa agaaacctct gacaccatat
    24181 tggtagccaa agcagccttt gcagcggcag cagctttctc agccacaatt ttttctgcag
    24241 cagctttggc tgctattttt gcagcttcaa ccttttttgt taacgctgat actgtcggac
    24301 tatcgcttat aactgtgtca tctgcactga cattcaccat tcccaaccat aaaagatttc
    24361 ctatgagggc tgtaaacagt cccaatttga attgtttttt tatcatttga taactcataa
    24421 tatttgattc cttcgtgttt ttctgcccta tctatcctaa gggataatcc ttgcagagag
    24481 cttaaaggaa tgtaacaaat attacagata acttgcaatc tcttaacaat cacagtgtcc
    24541 ggactttttg tcaaaaaaac gacctccaat acggaagtcg ttt
//
LOCUS       DASFQD010000018        24138 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.018, whole genome shotgun sequence.
ACCESSION   DASFQD010000018 DASFQD010000000
VERSION     DASFQD010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 24138)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24138)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24138
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.018"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..648)
                     /locus_tag="U1021_000578"
     CDS             complement(<1..648)
                     /locus_tag="U1021_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEM4711152.1"
                     /translation="MKNKQIHLRNASFFALAFVILGYVVKFYPTTLAGFDSTVQSAIR
                     GNLPSGASQFWTSITVLGNTVIILAITMILAAIFYYYKKWKIEASFLLASFAAMGVAS
                     TALKYVYQRPRPSIEWLIDTIGYSFPSWHTASTMMIAGAVVIIVHQRMKKGIARLVLQ
                     AMLILLAILVAVSRIYIGVHYPTDIIGGWLLAVTLLQMMYPFYDQKRFEWRFQSKQ"
     gene            complement(673..1230)
                     /locus_tag="U1021_000579"
     CDS             complement(673..1230)
                     /locus_tag="U1021_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HEM4711153.1"
                     /translation="MTNTRKMTIIAILSAVSFLLMYLKFPLIPTASFLEVDFSLVPIL
                     FGLLVLDMKSSFAILLVRTFLKLILNNQGPSTIIGLPMNIAAMSVFILAVAYFWKNDQ
                     ALKNYLKAATIATLGSTAVMLVLNYVYAVPVYAAFANFDIKEILGLTNYLLMMVFPFN
                     LLQGIVLSAIFYICYKAAQPILKKV"
     regulatory      complement(1290..1504)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            complement(1554..2099)
                     /locus_tag="U1021_000580"
     CDS             complement(1554..2099)
                     /locus_tag="U1021_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HEM4711154.1"
                     /translation="MNIETLEYIEETAKNHIVLFEPQIPQNTGNIARTCAATNSPLHI
                     IKPMGFPIDDRKMKRAGLDYWDKLDVRFYDNLAEFMDYASKQGRVHLVSKFADKTYSD
                     EDYNDGNIHYFLFGREDKGLPEYFMREHPEKAIRIPMNDEHVRSLNVSNTACMIVYEA
                     LRQQQFAGLDLVHTYDGDKLK"
     gene            complement(2666..2905)
                     /gene="yidD"
                     /locus_tag="U1021_000581"
     CDS             complement(2666..2905)
                     /gene="yidD"
                     /locus_tag="U1021_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002272085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEM4711155.1"
                     /translation="MTRLLIGLVRFYQKFISPLFPPSCRYRPTCSAYMIEALQKHGLK
                     GFLMGLARIGRCHPFVEGGEDPVPDRFSLKRNKQK"
     gene            complement(2905..3636)
                     /locus_tag="U1021_000582"
     CDS             complement(2905..3636)
                     /locus_tag="U1021_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEM4711156.1"
                     /translation="MRINKYIAHAGVASRRKAEELIKQGLVTVNGQVVRELGTVIKSG
                     DKVEVEGQPIYNEEKVYYLLNKPRGVISSVSDDKGRKTVVDLLPTVKERIYPVGRLDW
                     DTSGVLILTNDGDFTDEMIHPRNEIDKVYLARVKGVANKEVLRPLTRGVVIDGKKTKP
                     AVYEIIKVDPVKNRSVVELTIHEGRNHQVKKMFEAVGLQVDKLSRTRFGNLDLTGLRP
                     GEYRKLNKKDISKLHTLAVTKPVKK"
     gene            complement(3626..4195)
                     /locus_tag="U1021_000583"
     CDS             complement(3626..4195)
                     /locus_tag="U1021_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein B"
                     /protein_id="HEM4711157.1"
                     /translation="MNRLAEIEVLLFVAGEDGLTLRNLAEMLEMQPTAVSQQLEKLSE
                     KYMADKASGLAILESSNRYKLVTKKEYANLLRIYAKTPINQTMSRALLETLSIVAYKQ
                     PITRIEVDDIRGVNSSGAISKLQAFDLIRENGKKEVLGRPNLYVTTDYFLDYMGINSL
                     EELPDVSEIDLIQEETELFVERNELENEN"
     gene            complement(4179..4898)
                     /locus_tag="U1021_000584"
     CDS             complement(4179..4898)
                     /locus_tag="U1021_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HEM4711158.1"
                     /translation="MDIKLKDFEGPLDLLLHLVSKYQVDIYEVPITEVIEQYLAYIAT
                     LQAMRLEVAGEYMLMASQLMVIKSRRLLPKVVKQIAPEDDPEMDLLDQLEEYRKFKLL
                     SEKLGEQHDERANYFSKPKLDLIYDDVQLAKDKTVIDIFLAFSKVMAEKQASLRQSHA
                     TIARDEYKIEDMMDFVRSRFETGPRLELRQLFQESQDVNEMITIFLATLELVKVHEIV
                     LEQTETFGDIYLVRSEDESLS"
     gene            complement(4898..5629)
                     /gene="xerD"
                     /locus_tag="U1021_000585"
     CDS             complement(4898..5629)
                     /gene="xerD"
                     /locus_tag="U1021_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEM4711159.1"
                     /translation="MKQAIESFIQSKKVSVNSQKSYTYDLQQFVTVTRGEICQQSLLV
                     YQQSLLDLKPAAQKRKMSAVNQFLYFLYENNLLDRFYKLQTMSGPASVKKKLEREDLT
                     LLFQESPWLEGQLIALLIAYLGLTPSEIAELTSQQVNLDFQVLTVEKGGAKRVLTLPK
                     ELIPYMESHLSGRYVFDKKGQTYSRQWFFNRLTEFVQSIGKPDWTAQKLREQYILKQI
                     DEGKSLDQIAKQLGLKTSMSLEKFR"
     gene            complement(5626..6084)
                     /locus_tag="U1021_000586"
     CDS             complement(5626..6084)
                     /locus_tag="U1021_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEM4711160.1"
                     /translation="MIAREFEAFLLDQEETFLTPADKLAVIIDTHNIDHAKLLLSHMT
                     YSRVPVVTEDGRFFGTIGLTEIIKYQAENELSDDELNRDISVIVKTDEETVGLDYDLT
                     EVMRKLVDQSFLPVLGENREFMGIITRKSILKAINALLHNFPLASKEGKK"
     gene            complement(6081..6608)
                     /locus_tag="U1021_000587"
     CDS             complement(6081..6608)
                     /locus_tag="U1021_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEM4711161.1"
                     /translation="MAGASKTILVMSDSHGDRQIVEDIKHHYLGKVDAIFHNGDSELD
                     SQDSLWDGIQVVNGNCDYFGGYPDQLITQLDGVTIAQTHGHLYGINYGWQRLDYWAQE
                     VDADICLYGHLHVPDAEVRGKTLFLNPGSVSQPRGLVRECLYALVTIYDDHFHVDYYN
                     RQHQLYPALTKDISR"
     gene            complement(6581..7591)
                     /locus_tag="U1021_000588"
     CDS             complement(6581..7591)
                     /locus_tag="U1021_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-triphosphate diphosphatase"
                     /protein_id="HEM4711162.1"
                     /translation="MTDKIYEYRDEHNWFIGKASFANLFGSFGENGREQEIYQIGQLF
                     DKLIAGNYEDENFNQCVNIEVIKLQSEFALFQFACDTLNELNNRQFKALQHQGAILVT
                     ENDKLLLVHLPHAGVSTADFFGQDKGLASVGDIILIATKNEGKTKEFRKFFERFGYQV
                     ENLNNYPDLPDVAETGMTFEENARLKAETIAELTGKMVLADDSGLKVDALGGLPGVWS
                     ARFSGPDATDELNNAKLLHELAMVFELKDRSAQFHCTLVMAAPNRDSLVVEADWEGFI
                     GMDLRGENGFGYDPLFLVGETGKTSAELTLEEKNKISHRAQALEKLVEAFPVWQEQAK
                     QS"
     gene            complement(7588..8382)
                     /gene="racE"
                     /locus_tag="U1021_000589"
     CDS             complement(7588..8382)
                     /gene="racE"
                     /locus_tag="U1021_000589"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002931399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEM4711163.1"
                     /translation="MDNRPIGFLDSGVGGLTVARELMRQLPHEEIAYIGDSARAPYGP
                     RPAEQIREYTWQLVNFLLTKNVKMIVFACNTATAVAWEEVKEKLDIPVLGVILPGASA
                     AIKATQTGKVGVLGTAMTIQSDIYRQKIQALSPETQVDSLACPKFAPLVESNSHQSSL
                     AKKVVYETLRPLVGKVDTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLL
                     NYFQINRSRTEKAIQHQFYTTASPAAFKEIAESWMGIDIHVEHVEL"
     gene            complement(8472..8708)
                     /locus_tag="U1021_000590"
     CDS             complement(8472..8708)
                     /locus_tag="U1021_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YneF family protein"
                     /protein_id="HEM4711164.1"
                     /translation="MNLGLAILLIVLAFAGGVALGIYLSRKQVENYIADKPVLDENAL
                     RLMMSQMGQKPSEAKVQQVLRQIKSQQKVASKKK"
     gene            complement(8811..10058)
                     /locus_tag="U1021_000591"
     CDS             complement(8811..10058)
                     /locus_tag="U1021_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEM4711165.1"
                     /translation="MTKTPFVSKEVLETITEQFPTPFHLYDEKGIREKARALNAAFAW
                     NKGFKEYFAVKATPTPAILKILQEEGCGVDCATDVEVLMSEKLGFKDIMFTSNDTQAQ
                     EFVYARKVGATINLDAYEHIEFLKNLAGIPETVCLRYNPGGVFSLGTDIMDHPEESKF
                     GMTKEQLMKGYKELKELGVKEFGIHAFLASNTVTNDYYPVLAHQLFELALEIREETDV
                     TLDFIDLSGGIGVNYRPEQEPNDIAVIGEGVRKVYEEILTPAGMGHIKIFTELGRFML
                     APHGHLITKVLHRKETYRTYIGVDASAANLMRPAFYGAYHHITNITRPDAPIEVVDVA
                     GSLCENNDKFAVNRELPRAEVGDTLVIHDSGAHGFSMGYNYNGRLRSSEILLQEDGTA
                     RMIRRAETPEDYFATIYGFDFDR"
     gene            10192..11523
                     /gene="pepC"
                     /locus_tag="U1021_000592"
     CDS             10192..11523
                     /gene="pepC"
                     /locus_tag="U1021_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014607929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase C"
                     /protein_id="HEM4711166.1"
                     /translation="MSTLDFDFTERLYANYLANPSLQATENAVSHNGLLKSLETRQSA
                     IDNDYVFSIDLTKDAVSNQKASGRCWMFAALNTFRHKLISNFKLENFELSQAHTFFWD
                     KYEKSNWFLEQIIATTDQEIGSRKVKFLLDTPQQDGGQWDMVVALFEKYGVVPKSVYP
                     ESISSSASRELNQYLNKLLRQDAQILRDLLAKGASPEEVQTQKENLLQEIFNFLAVNL
                     GLPPRSFDFAYRDKDNVYHRDTNVTPQAFYEKYVGLKLSDYVSIINAPTTDKPYNKSY
                     TVELLGNVVGAPAVRYLNVEMNRFKELAIAQLKAGESVWFGSDVGQSSNRQTGIMATN
                     TYDFSSGLGIHFHQDKAGRLDYSESLMTHAMVLTGVDLDDNEQPLKWKVENSWGDKVG
                     DKGYFVASDSWMDEYTYQIVVRKEFLTQEELAAYQAQPQVLAPWDPMGALA"
     gene            complement(11572..12273)
                     /locus_tag="U1021_000593"
     CDS             complement(11572..12273)
                     /locus_tag="U1021_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEM4711167.1"
                     /translation="MNNDSFIINQVDNTALNRFFGKIYGVVAMGIGLSALVSFLAVTV
                     FQSLLLSLLSAGSIIMMLIMIGQIALVVSASAMAAKNSPMALPMFLAYSVTNGITISM
                     ILMFYTSETVVLAFVSAALMFAIMAVIGMTTKKDLSGMAQALRAALWGIIIASVINIF
                     LRSSGLSFMMSIISVLVFSGLIAYDNQRIRNVFEQTGGNVGQGWVVSMALQLYLDFIN
                     LFLNLLRIFGGLSRD"
     gene            complement(12295..12777)
                     /locus_tag="U1021_000594"
                     /pseudo
     CDS             complement(12295..12777)
                     /locus_tag="U1021_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027625.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
     gene            complement(12824..13564)
                     /locus_tag="U1021_000595"
     CDS             complement(12824..13564)
                     /locus_tag="U1021_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEM4711168.1"
                     /translation="MEIIRSKANHLVKQVKKLQQKKYRTSSYLIEGWHLLEEALAAKV
                     PIEHILVSEEHVHRVAGLSNVTVVSSDIMQDLADSRTPQGVVAQLALPSQLLPETLDG
                     KFLVLEDVQDPGNVGTMIRTADAAGFDGVFLSDKSADIYNMKVLRSMQGSHFHLPVYR
                     MPMTAIFSALKSNQLQILATTLSSQSVDYKEVTPNPSFALVMGNEGQGISTFVADEAD
                     QLVHITMPGQAESLNVAIAAGILLFSFI"
     gene            13695..13976
                     /locus_tag="U1021_000596"
     CDS             13695..13976
                     /locus_tag="U1021_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEM4711169.1"
                     /translation="MRKVKMIASGRVQGVGFRWSVQFLAVEIGDIYGRVWNNDDGTVT
                     ILAQSDNAEKLSHFIHEIRKGPSRMAKVTYLDITLANFEDYKDFQVAYR"
     gene            14040..14960
                     /gene="yidC"
                     /locus_tag="U1021_000597"
     CDS             14040..14960
                     /gene="yidC"
                     /locus_tag="U1021_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018030373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEM4711170.1"
                     /translation="MLKKNKRILLTGLALSTLVFLSGCVQTKNGVPTGEGWVYNFLVA
                     PMGNLIKFFAENQGLGFGVAIIIVTLIVRLFIMPLGIYQSWKSTYQSEKMNYLKPILG
                     PIQERMKNASSQEEQLAAQQEYFAAQKQYGVSVFGGMGCLPILIQMPFFTALFYAARY
                     TEGISEATFLGIDLGSASLILTAIAGILYYAQSLLMQVGMDEEQKKQMKAVAIMNPIM
                     IMMFSFGSPAGVTLYWVVGGLFGILQQAITNFILKPRIRKQVEEEFKNITVSATPRKT
                     KDVTPTASAVIEEKTSNKKRNRNAGKQRSR"
     gene            complement(15044..15526)
                     /gene="greA"
                     /locus_tag="U1021_000598"
     CDS             complement(15044..15526)
                     /gene="greA"
                     /locus_tag="U1021_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEM4711171.1"
                     /translation="MAEKTYPMTLEEKEKLEKELEELKLVRRPEIVERIKIARSYGDL
                     SENSEYEAAKDEQAFVEGQISTIETKIRYAEIVNSDAVAADEVAIGKTVTVQEVGETE
                     EEVYHIVGAAGADAFANKISNESPIGHALIGKKTGDVATIETPAGSYDVKILKVEKTK
                     "
     gene            complement(15600..17420)
                     /gene="mltG"
                     /locus_tag="U1021_000599"
     CDS             complement(15600..17420)
                     /gene="mltG"
                     /locus_tag="U1021_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEM4711172.1"
                     /translation="MTKDTNEKNTQSSGFRDQILRDLEELKVKRLAEQSADVLVDKRN
                     NEVINELQPSLAEEKAPHRETEIVKVEGIAFPDSYLSEEQQESEVMTESIEEPTSETL
                     ATPETFVIEKEVVSSPVPQDTVERNLEKLRNLVAANTAGFDEVPSSSSVSEPVESVLP
                     GNSPLEDTFLEFPTEDVSAVTGDTEIISLEETIIAPKTTAIVPEVDKQMQETQPRRRT
                     THRTSKQRRKKQDNAAKHIVSVIMSIVVVAVLVTGVTGYMWVKSSLEPVDAKATETIQ
                     VEIPEGSSTLEIGKILVDNKLIKNATIFNYYSKIKSYNNFQSGFYNLKQNMSVDDIAK
                     ALQESGTPTAQKEAAGKILIVEGYTLTQIAQAITDNTKTEDKNDKTPFTTEQFMATVT
                     NQDFINRMVATYPKLFASLPAADSGVIYQLEGYLFPAVYEYSDETTIEELVEQMIVAM
                     DNRLQPYYETIAAKNLTVNEVLTLASLVEKEGSTDEDRRNIASVFFNRLNAAMPLQSN
                     IAILYAQGKLGQETTLAEDAAIDTSIESPYNIYWTPGLMPGPVDSPSLSAIEAVINAN
                     TTDYLYFVADVTTGSVYFTNNIDEHNQNVAKYVNAHLDNE"
     gene            complement(17492..17977)
                     /locus_tag="U1021_000600"
     CDS             complement(17492..17977)
                     /locus_tag="U1021_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4711173.1"
                     /translation="MEIRFATPSDLEQVVLIENANFSKEERIAESVLATYLNTLSKTC
                     LIMEHDGEIAGYLLSCPSVSQTVTDDIFYLTESDMPTGSHLAIASLSVADSYKGQGVG
                     TLLLAAIKEVALAGGFEGVSLTCKGYLISYYEMNQFEDFGPSLSQFGGQRWSDMYWKA
                     L"
     gene            complement(18033..19364)
                     /locus_tag="U1021_000601"
     CDS             complement(18033..19364)
                     /locus_tag="U1021_000601"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015511317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEM4711174.1"
                     /translation="MTKTYHFIGIKGSGMSALALMLHQMGHKVQGSDVEKYYFTQRGL
                     EQAGIQILPFDEKNITADVELIAGNAFRPDNNVEIAYADAQGYTYKRYHEFLGEFMKG
                     FTSLGVAGAHGKTSTTGLLAHVMRNITDTTFLIGDGTGRGSANAQYFVFESDEYERHF
                     APYHPEYSIITNIDFDHPDYFTSLEDVFNAFNDYAKQVKKALFVFGEDEQLRRITANA
                     PIYYYGLEDNNDFVAYDLKPSTSGSQFKVRHGEEELGEFQIPTFGKHNVMNATAVIAN
                     LYIAGFDLQLVAEHLKTFGGVKRRFTEKIVNDTVIIDDFAHHPTEIIATIDAARQKYP
                     SKELVAIFQPHTFTRTIALLDEFADALNGADAVYLAQIYGSARETDNGQVKVEDLAAK
                     INKKGGLVTVENTSPLLDHDNAVYVFMGAGDIQSYEYSFERLLSNLTNNVQ"
     gene            complement(19366..20028)
                     /locus_tag="U1021_000602"
     CDS             complement(19366..20028)
                     /locus_tag="U1021_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711175.1"
                     /translation="MIRHEKRFPLVADDEVLVGENPIMSLYDESDLISNIRGPYQEKE
                     FSWSTDSQRVASAKPVAQTEDELLPPLFEAKPSHYSRKERLQQLTKTKPSPVKTQGQL
                     AREQAREDLKKKRSATYLRDEKPAPAKVVVKPPVVSTTESKAGRLTRLADNLRQTDYI
                     LADMPAVYSLKKEDREQEQVIKKNSYDFLRKSQVYNYPERRQQRDRQVAQELNLTHIE
                     EG"
     gene            complement(20107..23199)
                     /locus_tag="U1021_000603"
     CDS             complement(20107..23199)
                     /locus_tag="U1021_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4711176.1"
                     /translation="MGRMMPGRIRQEGIDLYEAGKLTVLQSENGKLELDIAGERFVYS
                     DEDSDLQCSCHLFQSKGYCQHLAATEYFLKNDASGKDMKQSLKEDGEQHKETVRRTYF
                     GGLFLDEILRPEPELGLKYQLSVEGSLLPYDRQIDWTLKITRLPDTRSYIVRDIGAFL
                     RIVKANGHYQIGKNYYEQVTYENFDEPSQALLDFLWALVPEKVGIDSDILTHFGRHFR
                     LPQAYFEEGLELLNQLEHFNFSYQQQSYSSLMVLPLTGEEGLYHFEVTVHTQMIEMAI
                     HEKTVRPLFHGRYLLVNGTVYSVNRHQEHLIYQISELVPTESGLRKVQVDFPDQNRLA
                     LSLLDLQTIGTVKAPKRFIIHDFKPEFHIQMEANESLSLQLVLDFDGRKVRSEEDLAH
                     LPFASHFQHLERVYQAIRLAGFRGIYHAQRAALSQQELYPFFQQQLPILQKMGQVHLA
                     EKLQALYIEAKPQLEIVRNGSLLDISFDLSGIEQSEIDQAITALLNQEDHYTSPSGKV
                     FVFDEETKKISQTLIYLRARHGKEGQVQVHALAGYQLAQSLSQFNQVSFSKEFEEMAS
                     YLAQPDLFPLPAVEVTTSLRDYQQTGLKWLTMLDTYGFGGILADDMGLGKTLQTIAFL
                     SSRMTKDSKVLILAPSSLIYNWLDECKRFAPSLDVAVVHGNKEQREEIIANGHQVLVT
                     SYPSFRQDVALYRQERFDYLILDEAQVMKNAQSKIAQLLREFEVGNCFALSGTPIENH
                     LTELWSIFQIVLPGLLPGKQDFGKLAAKDIARTIQPFVLRRHKEDVLQELPDLIEVNV
                     LNELTDEQKAIYLAQLQQMRTQIAGADDAQINRSKIEILSGITRLRQICDTPSLFMEE
                     FSGESGKLNSLKELLLQLKEGEHRVLIFSQFRNMLEKIEEQLVEIGMTSYTLTGSTPA
                     NQRQEMTQAFNAGSRDAFLISLKAGGVGLNLTGADTVILVDLWWNPAVEAQAISRAHR
                     MGQTEKVECYRLITRGTIEEKIQELQENKKNLVKTVLDGNESRANLTVEDIREILGIE
                     "
     gene            complement(23339..23647)
                     /locus_tag="U1021_000604"
     CDS             complement(23339..23647)
                     /locus_tag="U1021_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711177.1"
                     /translation="MEFFGELLVEFLTGLADFDEKKHPPFGIRYWLGWLGVLIHVLLL
                     ALLTCVTVFFFKFFLVGKGLINVVVAVVFLLFALFWLWKSGKTILKMWQATIYYLAIH
                     "
BASE COUNT         7056 a         5438 c         4532 g         7112 t
ORIGIN      
        1 ttgcttactt tggaaacgcc attcaaagcg tttttggtca taaaatggat acatcatttg
       61 taaaagagtg acggcaagta gccaaccacc gataatatct gtcggatagt gaaccccaat
      121 atagatacgg gatacagcta ccaggatagc aagtagaatc aacatggctt gtagcacaag
      181 tctagctatg cctttcttca tcctctggtg aacaataata acaactgctc ctgcaatcat
      241 catagttgat gcagtatgcc agctaggaaa tgagtaaccg atggtatcaa tcaaccattc
      301 aatacttgga cgcggacgtt ggtagacata tttcagggct gtggatgcca cccccatcgc
      361 cgcaaaacta gcaagtagga aagaagcttc tatcttccat tttttatagt agtaaaagat
      421 agcagctaga atcatggtaa tagctaaaat aataactgta tttcctaaaa cagtaataga
      481 ggtccaaaat tgactggctc cacttggtaa atttccacga atggcagact ggacagtcga
      541 gtcaaaacct gctagggtag taggataaaa ttttactaca tagcccaata tcacaaaggc
      601 tagagcaaaa aaagatgcgt ttcgtaaatg gatttgttta ttcttcatac agtatagttt
      661 accttataaa ggttaaactt tctttaaaat aggttgggct gctttgtaac agatataaaa
      721 tattgctgaa agcacaatcc cttgtaaaag attaaaagga aataccatca tcaaaagata
      781 gttagtcaga cccaagattt ctttaatatc aaaatttgca aaggctgcat agacaggcac
      841 cgcataaacg taatttaata ccagcatcac tgctgtcgaa ccaagcgtcg caatagtcgc
      901 tgcttttaaa taatttttta acgcttggtc atttttccag aaataagcta ctgctaaaat
      961 gaaaactgac atagctgcaa tattcatcgg taagccaata attgtcgatg gtccctgatt
     1021 atttaaaatc agtttgagaa aagttcgtac caaaaggata gcaaaactag acttcatgtc
     1081 tagaacaagc agaccaaata aaatcggtac gagagaaaaa tccacttcca agaaactggc
     1141 tgttggaatc agcggaaatt tcaaatacat gagcagaaag gatactgctg agagaatggc
     1201 gataatcgtc attttgcgtg tgtttgtcat aaggttcctc caatttttga aaattgaaga
     1261 agcgtggaag agcaggcaaa aagcctccac ttcgtcttct cccatccaga ctttactgtc
     1321 ggttgtggaa ttgcaccaca tcagctttcg ctcgcagact accaacggtc tattttgttc
     1381 taatactgcg ttagctcatc tcgacataca ttcagtatgg tcttcgattc gctgcctagt
     1441 cttaaaacaa attaccacgt tttacactgc cggtcgggaa tttcaccctg ccctgaagac
     1501 tatttcatca taccaaaaaa gccttgcatt tgcaagagct tggtaagttt tcactatttt
     1561 aacttgtccc catcatatgt gtgaaccaaa tctagaccag caaactgttg ctgccgaaga
     1621 gcctcatata caatcataca cgctgtatta gagacattaa gactacgcac atgttcatca
     1681 ttcattggaa tacggatagc cttctctgga tgttcacgca taaaatattc tggcaagccc
     1741 ttatcttcac gaccaaataa gaaataatga atattcccat cattatagtc ttcatccgaa
     1801 taggttttat cagcaaattt agatactaag tgaacacgtc cttgtttgct ggcataatcc
     1861 atgaattctg ctaaattgtc atagaagcga acatctaact tatcccaata atctagtcct
     1921 gcacgtttca tcttacggtc atcaattgga aatcccatag gcttaatgat atggagagga
     1981 ctattggttg cagcacaagt tcgagcaata ttgcctgtat tctgtggaat ctgtggttca
     2041 aataagacaa tgtggttttt ggctgtttct tctatatact ctaatgtttc aatattcata
     2101 aggacctctc tggtgacatt tcactaaaca cgaataccct cgaaaatcaa atccaaacca
     2161 tgtcagctgc attttaccgt ataccagtac ggtctgttgc ttgttgtcta gtttcttttt
     2221 ttgattttca ttgagtaaaa agactcgact gtctcctatg gcaagaaaga caaaaaaata
     2281 gccacactgc ccggagtcaa gctcagcaaa cagcatggtg aatgatgatt cattcactta
     2341 actcacaaca ggtttgagtt aaatcaatga aatcgtgata ctattgtagc ttaaagaagg
     2401 ctgaaaatca agagttttgc cccatttttt tcaaattttc atagaaaatc atggaggctg
     2461 ggcaaaaaga ccaacctcgc ttctcagagt tcgtgtcaac atctgagcgc agtgattgat
     2521 tggctttaac agtccagtgg acggttaata ttgaggcgaa cttgcttcgc cctatctcca
     2581 gccttcaaag gcttccaaac cttttgaaag agtactaaag gcaacctaaa aacctatatt
     2641 tatacagaac aaaaagtagg ttgccctact tctgcttatt tcttttcaaa ctaaacctgt
     2701 ccggcacagg atcttcccca ccttccacaa agggatgaca gcgaccaatt cgagccaacc
     2761 ccatcaaaaa gcccttgagt ccatgttttt gtaaggcctc gatcatataa gccgaacaag
     2821 ttggacggta gcgacaagag ggcggaaaaa ggggagaaat aaatttctga tagaatcgga
     2881 ccaagccgat caaaagtcta gtcattattt ttttactggc ttagtaacag ccagagtatg
     2941 tagtttactg atgtctttct tattgagctt gcggtattct cctggacgta ggccggtcaa
     3001 gtcaagatta ccaaagcgag tacgagacag cttgtctacc tgcaagccga cagcctcaaa
     3061 catcttctta acctggtggt ttcgaccttc atggattgtt aattctacaa ctgagcggtt
     3121 cttaacaggg tccaccttta taatctcata caccgcaggc ttagtctttt taccatcaat
     3181 gacaacacca cgggtcaatg gacgcaagac ttccttgttg gcaacccctt tgacacgcgc
     3241 caagtaaacc ttgtcaatct cattacgtgg gtgaatcatt tcgtctgtaa aatcaccgtc
     3301 attggtcaaa atcaagaccc cagatgtatc ccagtccaga cgtccaactg gataaatccg
     3361 ctccttaact gttggcaaca agtccacaac tgtctttctt cccttgtcgt ctgacacact
     3421 agaaataaca cctcgtggtt tattgaggag atagtaaacc ttctcttcgt tataaattgg
     3481 ttgtccctca acctctacct tatcacccga tttgataact gtccctagct cacgaacaac
     3541 ctgaccattt acagtaacta gtccttgctt aattaattct tctgccttac gacgactggc
     3601 aactccagca tgggcaatgt atttattaat tctcattttc taactcattt ctttctacga
     3661 atagctctgt ttcttcttga atcaaatcta tttcagacac atcaggcaat tcttctagac
     3721 tattaattcc catgtaatcc aggaaataat ccgttgtcac atagagattt ggtctaccaa
     3781 gaacctcttt cttaccattc tcacgaatga ggtcaaaggc ctgtaattta ctgattgcac
     3841 cactggaatt gactccgcga atatcatcaa cttcaatccg agtaatgggt tgcttatagg
     3901 ctacgattga taaggtttcc aaaagagccc gtgacatagt ctgattgatt ggtgttttgg
     3961 catagattcg caaaaggttt gcatattctt ttttagtaac caatttgtag cgattggaag
     4021 actctaagat ggctaagcct gaggctttgt ctgccatata tttctcacta agtttctcta
     4081 actgctggct gacagctgtc ggctgcattt ccaacatctc tgccaaattt cgtaacgtca
     4141 agccatcctc acctgccaca aagagcagga cttcgatttc agctaagcga ttcatcttca
     4201 ctccttacta gataaatatc tccaaaagtc tctgtctgtt ccaagacgat ttcatgaacc
     4261 ttgaccaatt ccaaagtcgc aaggaagatc gtaatcattt cattaacatc ttgactttct
     4321 tgaaaaagct gacggagttc aaggcgtgga ccagtctcga aacgactgcg aacaaagtcc
     4381 atcatgtctt cgattttata ttcatcacgg gcaatggtcg catgagactg acggaggctt
     4441 gcctgttttt cagccattac tttagaaaaa gctaggaaaa tgtcaatgac ggtcttatcc
     4501 ttggctaatt gtacatcatc ataaatcaaa tctaatttgg gttttgaaaa atagttcgcc
     4561 cgttcatcat gttgctctcc taatttctca ctgagaagtt tgaacttgcg gtattcttcc
     4621 aactggtcca agaggtccat ttcaggatca tcttcgggag caatttgctt aacaaccttc
     4681 ggcaataacc gacgactttt gatgaccatc aattgactag ccatgagcat atattctccc
     4741 gctacctcta aacgcatggc ttgcaaggta gcaatgtagg ccaaatattg ctcgataacc
     4801 tctgtaatcg gaacctcgta aatatctact tgatacttgg acaccaggtg tagcaggaga
     4861 tcaagtggcc cttcaaaatc ttttaatttt atatccatta tctaaatttt tccaaactca
     4921 tgcttgtttt cagtcccaac tgcttggcga tttggtccaa ggattttcct tcgtctatct
     4981 gttttagaat atactgctct cgcaattttt gggctgtcca atcaggcttg ccgatggact
     5041 ggacaaattc tgtcagacga ttaaaaaacc attgacgaga ataggtctgt cccttcttat
     5101 cgaagacata gcgtccagac agatgagact ccatataggg tatcaattcc ttgggcagag
     5161 tgagcacccg cttggctcct cccttctcaa ctgtcaggac ttgaaaatcc agattgacct
     5221 gctgactagt cagctctgct atttcacttg gcgtcaaacc taaatatgct atcaaaagtg
     5281 cgatgagctg accttctagc caaggacttt cttgaaagag gagagttaaa tcctcacgct
     5341 ccagtttctt tttgacgctt gctggacctg acatcgtttg caatttataa aaacgatcca
     5401 ggagattatt ttcataaaga aagtagagaa attgattgac cgctgacatt tttcttttct
     5461 gagcagcagg tttcaagtcg agaagagact gctgatagac caaaagagac tgttggcaaa
     5521 tctcccccct tgttactgtc acaaactgct gcaggtcata ggtataggac ttttggctgt
     5581 tgacactgac ctttttgctc tggataaaag attcaatcgc ctgcttcatt tcttgccttc
     5641 ttttgacgct agggggaaat tatgcaagag agcattgatt gcctttaaga tggattttcg
     5701 tgtaatgatt cccataaatt ctctattttc cccaaggacg ggtaagaaag attgatctac
     5761 tagcttgcgc atcacttctg tcaaatcata atccagacca accgtctctt catctgtctt
     5821 tacaatcaca gaaatatctc tgtttaactc atcatccgat agttcatttt cagcttgata
     5881 tttaatgatt tccgtcaagc cgatggttcc aaaaaagcgg ccatcttctg ttaccacagg
     5941 tacgcgtgaa taggtcatgt gactgagtag cagttttgcg tggtcaatat tatgcgtatc
     6001 aataattact gccaatttat ccgctggtgt caagaaagtt tcttcctggt ccaataaaaa
     6061 ggcttcaaat tctcttgcaa tcatcttgaa atatcctttg tcaatgctgg gtaaagttgg
     6121 tgctgtcgat tgtagtaatc cacatggaag tgatcatcat agatggtcac aagagcatag
     6181 agacattctc tgaccaaacc acgaggttga ctaacggagc caggattgag gaagagggtc
     6241 ttgccacgca cttcggcatc aggcacatgc agatgcccat acaaacaaat atccgcatca
     6301 acttcctgtg cccaataatc caaccgctgc cagccgtaat taatgccata aagatgacca
     6361 tgagtttgag cgatagtcac accatccaat tgagtaatga gctggtcagg gtaaccacca
     6421 aaatagtcgc agttcccatt gaccacttga atgccgtccc acaaactatc ttgactatcc
     6481 agctccgaat caccattgtg aaagatggca tcgaccttac caagataatg atgtttaata
     6541 tcctctacaa tctgtctatc cccatgagag tcgctcatga ctaggattgt tttgcttgct
     6601 cctgccatac tggaaatgcc tccactaatt tttctagtgc ttgtgcacgg tgggaaatct
     6661 tatttttttc ttctaaggtt aattctgccg aggtcttacc tgtttcgcct acgaggaaaa
     6721 gtggatcata tccaaaccca ttttccccac ggaggtccat accgataaag ccttcccagt
     6781 ccgcttcgac aaccaaacta tcacgatttg gagccgccat aactagggtg cagtggaact
     6841 gagcagaacg atctttcagt tcaaatacca tggccaactc gtgcaagagt ttggcattat
     6901 tgagctcatc ggtggcatct gggcctgaaa aacgagcaga ccaaactcct ggcaaaccac
     6961 ctaaagcatc aaccttcaaa cccgaatcat ctgccaagac catcttgcct gtcagctctg
     7021 ctatggtttc agccttgagc cgtgcatttt cctcaaaagt catccctgtt tctgctacat
     7081 ctggcaggtc aggatagttg ttgaggttct cgacctggta gccaaaacgc tcaaaaaact
     7141 tacggaattc cttggtctta ccttcatttt ttgtagcgat caagatgata tctcctacgc
     7201 ttgccaatcc cttgtcttga ccgaagaaat ctgccgtgct aacccctgca tgtggcagat
     7261 gaaccaagag aagtttgtca ttctctgtta ccagaatagc tccttggtgt tggagggcct
     7321 tgaactgacg attgtttaac tcattcaaag tatcacaggc aaattgaaag agggcaaatt
     7381 cagactgaag tttaatcact tcaatgttga cacactggtt aaaattctca tcttcataat
     7441 tacctgcaat cagtttgtca aacaattgac caatctggta aatttcctgc tctcttccat
     7501 tttcaccaaa tgaaccaaat agattggcaa agctggcttt tccaataaac caattgtgtt
     7561 catctctgta ttcgtatatc ttgtctgtca tagttctaca tgctccacat gaatatcaat
     7621 gcccatccag ctttcagcta tttctttaaa agctgccgga ctagctgttg tgtaaaattg
     7681 gtgctgaata gccttttcgg tacggctgcg gttgatttga aaataattta ataaaacaga
     7741 aatatctcgc gcgcactctg ccccactgtc aatcaacttg acatccttgc ccatggcatt
     7801 ttggatgata gggcgaagca gaggataatg ggtacatccc aagaccaagg tatctacttt
     7861 cccaacaagt ggtcgaagtg tctcataaac aacctttttg gcaagactgg attggtggct
     7921 attggactca accagtggtg caaatttggg acaggctagg ctgtctacct gcgtttccgg
     7981 agaaagggcc tgaatctttt gtcgataaat atctgattga atggtcatag ccgttcctaa
     8041 gacaccaacc ttaccagttt gcgttgcctt aatagctgcc gaagcacctg gtaaaataac
     8101 acccaaaaca ggaatatcca acttttcctt gacttcttcc caggctaccg ctgttgccgt
     8161 attgcaggca aagacaatca tttttacatt ttttgtcaaa aggaaattga ccaattgcca
     8221 agtatattct ctgatttgtt ccgctggacg gggtccataa ggtgcccgtg ccgaatctcc
     8281 gatataagcg atttcttcat ggggaagctg gcgcattaac tcacgcgcaa ccgttaatcc
     8341 ccccacacct gaatctaaaa aacctattgg tcgattatcc ataatactga gaatagccag
     8401 aaaatctgac tagcctttct tttctactca aaaaatggga tctgggaatg aatatcccag
     8461 tcccagtttg attatttttt cttgcttgcc actttttgtt ggctcttgat ttggcgaagt
     8521 acttgttgta cttttgcctc gcttggtttt tgccccattt ggctcatcat caaacgcaaa
     8581 gcattttcat ccaaaactgg cttgtcagca atgtagtttt ccacttgttt gcgtgacaag
     8641 taaataccca aggctacacc acctgcaaat gccaatacaa taagtaaaat tgctaaacct
     8701 aagttcattt gtcaatctcc tgactcttct aaaaataatt cattcggaat tgccctgcga
     8761 caatctctta atgaatctat tataccaaat ttagcaggct tttccaagac ttacctgtca
     8821 aaatcaaaac cgtaaatggt cgcgaaataa tcctctggtg tttcagcacg acgaatcata
     8881 cgcgctgtgc catcttcctg caaaaggatt tcagaggaac gcagacgacc gttgtagttg
     8941 tagcccatgg agaagccgtg ggcaccactg tcatgaatga ccaaggtgtc tcctacttct
     9001 gcgcgtggta attcccgatt aaccgcaaac ttgtcgttgt tttcacagag ggaacctgcc
     9061 acatccacaa cttcgattgg cgcatctggg cgcgtgatat tggtgatatg gtggtaggcg
     9121 ccatagaagg ctggacgcat aaggtttgca gccgaagcat ccacacctat ataagtccga
     9181 taggtttcct tacgatggag cacctttgta atcaagtgac cgtgtggcgc caacataaag
     9241 cgacccaatt ctgtaaagat tttaatatgt cccataccag ctggcgtgag aatttcctca
     9301 taaaccttac ggacaccctc accaatgaca gcaatgtcgt ttggttcttg ctcaggacga
     9361 taattgactc caatcccacc tgataggtcg atgaagtcca aggtcacatc tgtttcctca
     9421 cgaatttcca aggccaattc aaaaagttga tgagctaaga caggatagta gtcatttgtt
     9481 actgtattcg aagctagaaa ggcatgaata ccaaattcct tgacaccaag ctcttttagt
     9541 tccttatagc ctttcatcaa ctgttccttg gtcatcccaa acttagactc ttctgggtgg
     9601 tccataatat ccgttcccag cgagaagacc ccacctggat tgtaacggag gcagaccgtt
     9661 tctgggatac cagcaagatt tttcaaaaac tcaatatgct cgtaggcatc aaggttaatg
     9721 gtcgccccaa ctttacgagc atagacaaac tcttgcgctt gggtgtcatt tgatgtgaac
     9781 atgatgtcct taaagcccaa tttttcactc atgagtactt ctacatccgt cgcacagtcc
     9841 actccacaac cttcttcttg taaaattttc aaaatagcgg gtgtcggtgt cgccttgacc
     9901 gcaaaatatt ccttaaagcc tttgttccat gcaaatgctg cattgagggc acgggccttc
     9961 tcacgaatgc ctttttcatc atacaaatga aaaggagtcg gaaattgctc cgtaatggtt
    10021 tctaaaactt ctttactaac aaatggtgtc ttggtcatgt cactacctca tcaaatattt
    10081 ttcctattat atcacaaata tgtgaggaac tgtagctttc aactccacca aatacttgca
    10141 aaataaatta tgagcgctat aatgtgatta tcattaaaaa aggagtaata tatgtcaaca
    10201 ttagattttg attttacaga acgcttgtat gccaactatc tagctaatcc aagcctacag
    10261 gcaaccgaaa atgccgttag ccacaacgga cttttgaaat ccttagaaac acgccaaagc
    10321 gccatcgaca atgactatgt cttttcaatt gacttgacca aggacgctgt ttcaaaccaa
    10381 aaggcttctg gacgttgctg gatgtttgct gcattaaaca ccttccgcca caaactcatc
    10441 tctaacttca aactggagaa ttttgagcta tcacaggccc ataccttctt ttgggataaa
    10501 tatgaaaagt ccaactggtt cctcgaacaa atcattgcca caactgacca agaaattggt
    10561 agccgtaagg taaaattctt attggatacc cctcaacaag atggcggtca atgggatatg
    10621 gttgttgcct tatttgaaaa atatggtgtt gtaccaaaat ctgtttaccc agaatctatc
    10681 tcatccagtg ccagccgtga gctcaatcag taccttaaca aattgctccg tcaagatgca
    10741 caaatcttgc gtgacctcct tgcaaaagga gcttctccgg aagaggttca aacacaaaaa
    10801 gaaaacttgc ttcaagaaat ctttaacttc ctagccgtca accttggact ccctccacgc
    10861 agctttgatt ttgcatatag agataaagac aatgtttatc accgcgatac aaatgtgaca
    10921 cctcaggcat tctacgagaa atacgttggt ttgaaactat ctgactatgt ctccattatc
    10981 aacgctccaa ctactgataa accttacaat aaatcttata cagtcgaatt attggggaac
    11041 gtcgttggtg cccctgctgt ccgctacctc aatgtagaaa tgaaccgttt taaagaacta
    11101 gctattgctc aactcaaagc tggtgagtcc gtttggtttg gttccgatgt cggtcaaagc
    11161 agcaatcgcc aaacaggcat catggcaacc aacacctacg acttctcttc aggtctgggt
    11221 atccatttcc atcaagacaa ggctggaaga ttagactact ccgagagctt gatgacccac
    11281 gctatggtct taactggtgt tgatttagac gataatgagc aacctctcaa atggaaagta
    11341 gaaaactctt ggggtgacaa ggttggtgac aagggatact tcgtcgcatc agatagctgg
    11401 atggacgagt acacttatca gattgttgtc cgaaaagaat tcctcacaca agaagaatta
    11461 gcagcttatc aagctcaacc acaagtcctt gctccatggg atccaatggg agctctagca
    11521 taacaaacga catataaaaa agaggacatc cctctttttt atatgtcata attagtctct
    11581 actcaaacca ccaaagatac ggagtaggtt gaggaagagg ttgataaagt caagatagag
    11641 ctgaagcgcc atggatacga cccaaccttg gccaacatta ccaccagttt gttcgaaaac
    11701 attgcggata cgttggttgt cataagcaat caaacctgag aataccaaaa cagaaatgat
    11761 agacatcata aagcttagac cagagctacg aaggaagata ttaataacac ttgcaataat
    11821 aattccccat agagctgcac gcaatgcctg agccatacca gaaagatcct tcttcgttgt
    11881 catcccaatt acagccatga tagcaaacat aagagccgct gacacaaagg caagaacaac
    11941 tgtttcgctg gtatagaaca tcaagatcat gctgatggta atcccatttg ttactgagta
    12001 ggcaagaaac attggtagag ccattgggct atttttagct gccattgctg aagcagaaac
    12061 aaccaaggca atctgaccaa tcataatcag catcatgatg atggaacctg cactcagcag
    12121 actaagcaat aaagattgaa agacggtcac agccaagaaa gaaactagag ctgacagacc
    12181 aattcccatg gcaaccacac cataaatttt accgaagaaa cggttgaggg cggtattatc
    12241 cacctgatta ataataaatg aatcgttatt catactattc tcctttaaat catcttattg
    12301 aaaacggaag accttacgat ttttccactt gtgttgtaag ggcagactcc attctcttac
    12361 tgcccaatac ttatccacac atgtcacaat ccaggattcc ttgtagcgag gaggagcgat
    12421 tgtcgcacca aacatatgct tcacaatgag gtcttcttct agtttattga gttgaatgag
    12481 tttctgagca ttgcgtttag caattcgtgg atgaacccaa gcatggctct tgttaaattt
    12541 ggtatctctc cagtcataga agaataaatc atgcaataga ccaccacgag ctgttgactt
    12601 ggcatcccaa ccaaattttt tcgcaatctt atagcttgta taagagacat tgatggaatg
    12661 ttccaagcgc gtggagtgat aatgatgagg aatcttcccc aatttttgca ccttgggtgt
    12721 ggcaatcaag tgccccacgt aatgcatgta ttatttatct tgtttatatg caaccattcg
    12781 ttaacctcgt tggaatatta taccacacta tagtacaatt ggcttaaata aagctaaaca
    12841 atagaatacc cgccgcaatt gctacattga ggctttccgc ctgccctggc atggtaatat
    12901 ggacaagttg atccgcctca tcggctacaa aagttgaaat tccttgacct tcatttccca
    12961 tgaccaaggc aaaactcgga tttggcgtaa cttccttata gtcaaccgac tgactagaga
    13021 gggttgttgc caagatttgt agctgattgc tttttaaagc agaaaaaata gcagtcatcg
    13081 gcatccgata aactggcaag tggaaatgac tcccttgcat ggaacgcaga actttcatat
    13141 tgtaaatatc tgccgactta tccgatagaa atactccatc aaaaccagct gcatcagctg
    13201 tacgaatcat ggtaccaaca tttccagggt cctgcacatc ttccagaacc aaaaattttc
    13261 catctaaagt ctcaggtaga agttggctcg gcaaagcaag ttgagctact accccttgcg
    13321 gtgtccgtga gtctgctaaa tcctgcataa tatctgaact aacaactgtt acattggata
    13381 agccagcaac ccgatgaaca tgttcttctg ataccaagat atgttcgata ggtactttgg
    13441 ctgccaaagc ctcctccaac aaatgccaac cttcaatcaa ataagaagaa gtacggtatt
    13501 ttttctgttg taatttctta acctgcttga ccaaatgatt ggcctttgag cgaatgatct
    13561 ccatgaatgc ccctttttct tttactgctc agcaacttca atttcccaac ggctaaatca
    13621 attatcttga tttttgaaca gtcttaccca accatgatat aataaagtaa atgtcttgtc
    13681 aaaaggagaa acttatgcga aaggtaaaaa tgattgcatc tggtcgtgtg caaggagtcg
    13741 gctttcgttg gtctgttcaa tttttagctg tggaaatagg cgacatctac ggcagagttt
    13801 ggaataatga tgatggaact gtcaccattt tagctcagtc agataatgct gagaagctca
    13861 gccattttat ccatgaaatt cggaaagggc cttctcgtat ggccaaagtt acctatctag
    13921 atatcaccct agccaacttc gaagactata aggattttca ggtggcgtat agataaaact
    13981 tgtatatttt gaacaaaaaa agtaaaatag aatgtatctt gtaaaaaaag gaatgtatca
    14041 ttttgaaaaa gaataaacga attttattaa caggtctggc cctgtctacg ctagtatttc
    14101 tatcaggatg tgtgcagaca aagaacggtg ttcctactgg tgaaggttgg gtctacaact
    14161 tccttgttgc cccaatggga aacctgatta aattcttcgc ggaaaaccaa ggactcggtt
    14221 tcggcgttgc tattatcatc gtgacattga ttgttcgtct cttcatcatg ccactaggta
    14281 tttaccaatc ttggaaatca acctatcagt ctgagaaaat gaattacctc aaaccaattt
    14341 taggtccaat ccaagaacgc atgaaaaatg caagttccca agaagagcaa ttagctgccc
    14401 aacaggaata ctttgctgct caaaaacaat atggcgtcag cgtatttggt ggaatgggct
    14461 gccttcctat cttgattcaa atgccattct ttacggcact cttctatgca gctcgttaca
    14521 cggaaggaat ctcagaagca accttccttg gtattgatct cggttctgca agtctcattc
    14581 taacagctat tgctggtatc ctctactacg ctcaatcact tctgatgcaa gtcggtatgg
    14641 acgaagaaca gaagaaacaa atgaaagctg tggcaatcat gaacccaatt atgatcatga
    14701 tgttctcatt tgggtctcct gctggtgtga ctctctactg ggttgtcggt ggtctcttcg
    14761 gtattcttca acaagctatt acaaacttca ttttgaaacc tcgtattcgt aaacaagtgg
    14821 aagaggaatt caaaaatatc acagtgtcag caactcctcg taaaacgaag gacgttactc
    14881 caactgcttc agcagttatt gaagaaaaga catctaacaa gaagagaaac cgtaatgcag
    14941 gaaaacaacg ttctagataa taaacactaa aagattggaa tttccaatct tttttagcac
    15001 cttcgtgaat aaaaagagag aatctttcga ctctctccac accttatttc gttttttcaa
    15061 ccttcaagat ttttacatca taactaccag caggtgtttc aattgttgca acatctcctg
    15121 tttttttacc aatcaaagca tgaccaattg ggctttcatt tgaaatcttg tttgcaaagg
    15181 catctgcacc tgcagcacca acgatatgat agacttcttc ctcggtctca ccaacttctt
    15241 gaacagtcac agtcttacca attgctactt catccgcagc aactgcatca ctgtttacga
    15301 tttcagcata gcgaattttt gtttcgattg ttgagatttg accttcaaca aaagcctgtt
    15361 catctttagc tgcttcgtac tcagagtttt ctgaaaggtc tccgtaagaa cgagcaattt
    15421 taatacgttc aacaatttct ggtcgacgaa ctagctttag ttcctctaat tctttttcta
    15481 gtttttcctt ttcttccaag gtcattggat atgttttttc tgccatttgt ctttcctttt
    15541 cttttatttt tcatgaaaac aaaattatgt ggaaaaccac ataattttgt tgtaagaatt
    15601 tactcattat caagatgtgc atttacatac ttagcaacgt tttggttatg ttcatcaata
    15661 ttatttgtaa agtaaacact tccagttgta acatctgcta caaagtaaag atagtctgtc
    15721 gtgttggcat taatcactgc ctcgatagcc gaaaggcttg gactatccac tggtccaggc
    15781 atcaatcctg gtgtccaata aatattgtat ggtgactcaa ttgatgtatc aatcgctgca
    15841 tcttctgcca gagttgtttc ttgaccaagt ttaccctgag catacaagat tgcaatattg
    15901 gattgtagag gcattgctgc attcaagcgg ttaaagaaga cacttgcaat gtttcgacga
    15961 tcttcatcag tagaaccttc tttttcaacc aaagatgcca aggtaagaac ttcatttaca
    16021 gtcaaattct tagcagcaat cgtttcataa tatggttgta aacgattatc catcgcgaca
    16081 atcatttgct caacgagctc ttcgatagtt gtttcgtcgc tgtattcata aaccgctggg
    16141 aagaggtaac cttccaactg ataaataact ccactatcag cagctggtaa gctggcaaac
    16201 aattttggat aagtagcaac cattcgatta ataaaatctt ggttggtcac agtagccata
    16261 aattgttctg tggtaaatgg tgttttatca tttttatctt ctgtcttggt attatctgta
    16321 atagcctgag caatttgtgt cagtgtatac ccttcaacaa tcaaaatctt acctgcggct
    16381 tctttttgag ctgtcggagt gccactttct tgaagtgctt tggcgatgtc atccacagac
    16441 atattttgtt ttaaattata aaaaccactt tggaaattat tatagctctt aattttagag
    16501 tagtaattaa aaatagtagc attcttaatc aacttgttat cgactaaaat tttaccaatt
    16561 tctaaagttg aagatccttc tggaatctct acctgaatag tttctgtagc ttttgcatcg
    16621 actggttcca gactagattt tacccacata taaccagtaa cacctgtcac tagaactgcc
    16681 actacaacaa tcgacatgat aacagagaca atgtgtttag cggcattatc ttgtttttta
    16741 cgacgttgct tgcttgttct gtgggttgtt cttcttctgg gttgtgtttc ctgcatctgc
    16801 ttgtctactt ctggaacaat agccgttgtc tttggagcaa taatagtttc ctctagtgag
    16861 atgatttctg tatcaccagt cacagctgac acgtcttccg ttggaaattc taaaaatgta
    16921 tcttctaaag gagaatttcc cggaaggaca gactctactg gctcagaaac tgacgagctt
    16981 gatggtactt catcaaatcc tgccgtatta gcagccacaa gattccttaa tttctccaag
    17041 tttcgttcaa cagtatcttg tggaactgga cttgaaacaa cttctttttc aatcacaaaa
    17101 gtctctggag tagccaaagt ttctgatgtt ggctcttcaa tactttccgt catcacttct
    17161 gattcttgct gttcttctga caagtatgaa tcagggaaag caataccttc tacttttaca
    17221 atttcagtct ctctatgggg ggctttttct tcggcaagac taggctggag ctcgttgata
    17281 acttcattat tacgcttatc aacaagaaca tccgctgact gttccgccaa acgtttcacc
    17341 ttcaattctt ccaaatctcg taaaatttga tcgcggaagc ctgaagactg cgtgtttttt
    17401 tcattcgtat cctttgtcac gctgttactc ctttcacaca gttactatac attatatctt
    17461 aaaggcttat gaattgcaag aacttccctt tctacaaggc tttccagtac atatcactcc
    17521 acctttgtcc tccaaattgc gacaaggagg ggccaaaatc ttcaaactgg ttcatttcat
    17581 agtagctaat caaatacccc ttacaggtca gggaaactcc ttcaaatcct cccgctaaag
    17641 ccacttcttt tatggctgcc aacaaaagag ttcccactcc ctgtccctta taggaatccg
    17701 ctacggatag actggcaata gctaggtgac tgcctgtcgg catgtcactc tctgtcaagt
    17761 aaaaaatatc gtctgtaaca gtctgcgaaa cagagggaca ggataataaa tatcctgcta
    17821 tttccccatc gtgttccatt attaaacagg ttttactcaa agtattcaga taagtagcaa
    17881 gaacagactc agctatccgt tcctctttag aaaaattggc attttcaatc aaaacaactt
    17941 gttctaaatc cgaaggagta gcaaaacgaa tttccataat tttctccctt atatagcgga
    18001 aaaacagggg ccataggcct ccgtctttct ttttattgga cgttatttgt aagatttgac
    18061 aagagtcttt cgaaagaata ttcataggac tgaatatcac cagctcccat aaatacatat
    18121 acggcattgt catggtctaa aagtggtgaa gtattttcaa ctgtaacaag tccacctttt
    18181 ttgttaattt tagccgccaa atcttctacc ttaacctgac cgttgtctgt ttcacgcgct
    18241 gagccataga tttgagcaag gtaaactgca tctgctccat tcaaagcatc tgcaaactca
    18301 tcgagaagcg caatggtacg agtgaatgta tgtggttgga agatggctac caactccttg
    18361 ctaggatact tctgacgtgc cgcatcaatg gttgcaatga tttccgttgg atggtgagca
    18421 aagtcatcaa tgataacagt atcattgaca attttctccg taaagcgacg tttgacacct
    18481 ccaaatgtct tcaagtgttc tgcaaccagt tgcaaatcaa atccagcaat atagagattg
    18541 gcaataacag ctgttgcatt catcacatta tgcttaccaa aggttggaat ttggaattct
    18601 cccaactctt cttcaccatg gcgaactttg aattgtgaac cacttgtaga aggcttcaag
    18661 tcataggcaa caaaatcatt attgtcttcc aaaccataat agtaaattgg agcatttgcc
    18721 gtgatacgac gaagttgctc atcttcacca aaaacgaaga gagctttttt tacttgcttc
    18781 gcataatcat tgaaagcatt gaaaacatcc tctagactag tgaaataatc tggatggtca
    18841 aaatcaatat tggtaatgat gctgtattca ggatggtatg gggcaaagtg gcgttcgtat
    18901 tcatcggatt cgaacacaaa atactgagca tttgccgaac cgcgaccagt accatcacca
    18961 atcaagaagg tagtatctgt gatattgcgc ataacatgtg ccaataatcc cgttgtggag
    19021 gtcttaccat gggcaccagc aacaccgagg ctcgtaaaac ctttcataaa ttcacctaga
    19081 aattcatggt aacgtttgta ggtatagccc tgagcatcag cataagcgat ttccacattg
    19141 ttatctggac gaaaagcatt accagcaatc aattcaacat ctgctgtaat atttttctca
    19201 tcaaacggta aaatctgaat cccagcttgt tcaagcccac gttgtgtaaa gtagtatttc
    19261 tctacatcac tcccctgaac cttgtgcccc atttgatgca acataagagc aagtgcgctc
    19321 atacctgatc ccttaattcc gataaaatga taggtttttg tcatgttatc cctcttctat
    19381 atgtgtcaaa ttcaattctt gtgccacttg gcgatctcgt tgttgtctgc gctcaggata
    19441 attgtaaacc tgactctttc ttaaaaagtc atacgaattt ttctttataa cctgctcctg
    19501 ttctctatct tctttcttca aagaatagac agctggcata tcagcgagaa tatagtctgt
    19561 ctgacgtagg ttgtccgcca aacgtgtcaa ccgacctgcc ttagattcag ttgttgaaac
    19621 gacaggaggt ttcaccacaa ctttagctgg tgctggtttt tcatctctta agtaggttgc
    19681 tgatcgtttt ttcttcaagt cttctctagc ctgttcgcga gccaactgcc cctgtgtttt
    19741 cactggagaa ggcttcgttt tagtcagttg ctgaaggcgt tccttgcgag aataatggct
    19801 tggcttagct tcaaacagag gaggcaggag ctcatcttcc gtttgtgcta ctggttttgc
    19861 cgacgcaact cgctgtgaat cggtagacca gctaaattcc ttttcttgat aaggtcccct
    19921 gatattgcta atcaggtcgc tctcatcata taaactcata attggatttt ctccaactag
    19981 tacctcatca tctgcgacta gtggaaatct tttttcatgt ctaatcataa gtcatccttt
    20041 cgaaccctta ttataccata cttaggcctt atttcctaat tctacgctga gtcaactgat
    20101 tccatatcac tcaatcccta aaatctcacg aatatcctca accgtcaaat tcgctcggct
    20161 ttcattgcca tcaagaactg ttttgacaag gttcttttta ttttcttgta attcttgaat
    20221 cttctcttcg attgtccctc tagtaatcag gcgatagcat tcaacctttt cagtctgccc
    20281 catgcgatga gcccggctga tagcctgcgc ttccacggca ggattccacc aaaggtcgac
    20341 taggatgact gtgtctgcac ctgtcaaatt caagccaacg ccacctgctt tcaaggaaat
    20401 gagaaaggca tctcgacttc ctgcattgaa ggcctgtgtc atttcttggc gttggttagc
    20461 aggggttgaa ccagtcaaag tataggatgt catcccaatt tctaccagct gttcttctat
    20521 tttttccagc atatttctga attgggagaa tatcaagacc ctgtgttcac cttcttttag
    20581 ctgcaagagt aattctttca aactattaag tttgccactc tcaccactaa actcttccat
    20641 gaaaaggctg ggggtatcgc agatttgacg taagcgagta attcctgata ggatttctat
    20701 cttgctacga ttgatttgag catcatctgc gccagctatt tgagtccgca tttgttgaag
    20761 ctgggctagg tagatagctt tttgttcatc tgtcagttca ttaagtacat tgacctctat
    20821 caaatcaggc aattcctgaa gaacgtcttc cttatgacgt ctgagaacga agggttgaat
    20881 ggtccgcgca atgtccttgg ctgctaattt accgaagtct tgtttgcctg gcaataaacc
    20941 tggtaagaca atttggaaaa tggaccagag ttccgtcaaa tggttttcaa tcggcgtacc
    21001 tgagagggca aagcaattcc caacctcaaa ctcacgcagg agctgtgcaa tcttagattg
    21061 ggcattcttc atgacctgcg cctcatctaa aatgaggtag tcaaagcgtt cctgtctata
    21121 gagtgcgaca tcctgtctga aggatggata ggaggtaact aagacttggt gcccattggc
    21181 aatgatctct tcacgctgtt ctttgtttcc atgaacaact gccacatcta aacttggagc
    21241 aaaccgcttg cactcatcta accagttata aatcaagcta gacggtgcca atattaaaac
    21301 tttggaatct tttgtcatcc gactggacag aaaggcgata gtttgcaagg tctttccaag
    21361 ccccatgtcg tcagctaaaa ttccaccaaa accatacgta tccagcatag tcaaccactt
    21421 aagccctgtc tgctgataat ccctaagcga cgttgttact tccacagcag gaagcgggaa
    21481 caaatctggc tgagctagat agcttgccat ttcctcaaat tccttggaga aactgacttg
    21541 gttgaattgt gacaaggatt gagccaattg gtaaccggca agagcatgga cttgtacctg
    21601 cccctcctta ccatgacggg cccgcaaata gattagggtt tgactgattt tcttggtttc
    21661 ctcatcaaaa acaaatacct taccgctcgg gctagtatag tggtcctctt gattcagcaa
    21721 ggctgtaatc gcctgatcga tttcagattg ttcaatacct gataagtcaa acgaaatatc
    21781 caaaagtgat ccgttacgca caatttctaa ttgaggtttg gcttcaatat ataaagcctg
    21841 gagcttttct gctagatgaa cctgccccat tttttgtaat ataggcaatt gttgttggaa
    21901 aaatggatag agctcctgct gactaagagc cgctctctgg gcatgatata ttcccctaaa
    21961 gccagctaaa cgaatagcct gatagaccct ctccaaatgt tggaaatggc tggcaaaagg
    22021 caggtgagcc aaatcctctt cactccttac cttacgtcca tcaaaatcca aaaccaattg
    22081 gagtgataaa ctttcatttg cctccatctg aatatgaaat tctggcttga aatcatgaat
    22141 gatgaagcgt ttaggtgcct taacagtccc aattgtctgc aaatccagca agcttaaagc
    22201 cagacgattt tggtcaggga aatccacctg cacttttctc aaacctgatt cggttggaac
    22261 aagttcggaa atttggtaaa tcagatgttc ttgatggcga ttgacactat aaaccgtgcc
    22321 atttactaag agatagcgcc catgaaaaag aggtcggact gttttttcat gaatagccat
    22381 ttcaatcatc tgcgtgtgaa cggtcacctc aaaatgatag agcccttcct cccctgtcaa
    22441 cggaagaacc atcaaggagg aataggactg ctgttgatag gaaaagttaa aatgttctag
    22501 ctgatttaac agctccaacc cctcctcaaa ataggcttgt ggcagacgaa aatgtcgtcc
    22561 aaaatgagta agaatatccg aatctatacc aactttctct ggtaccaagg cccagagaaa
    22621 atccaggaga gcctgacttg gttcatcaaa attttcataa gtaacttgct cataataatt
    22681 tttacctatc tgataatgac cattagcttt cacaatgcgc aaaaaagctc cgatgtcccg
    22741 cacaatatac gaacgtgtat ctggcaagcg ggtaattttc aaggtccaat ctatctgacg
    22801 atcatagggc aataagctcc cttcaactga taactgatac ttaagcccca gttcaggttc
    22861 tggccgcaaa atttcatcta aaaagagacc gccaaaataa gtccgacgga cggtttcctt
    22921 atgttgttca ccatcttctt tcaaagactg cttcatatcc ttgcctgagg catcattttt
    22981 taaaaaatac tccgtggcag ctaggtgttg acagtagccc ttgctttgaa acaagtgaca
    23041 actacactgc aaatcactat cctcatcgct gtaaacaaaa cgttccccag caatatccag
    23101 ctccaacttc ccattctcgc tctgaagaac agtcagtttc ccagcctcgt acaaatcaat
    23161 tccttcttgg cgaatccgcc ctggcatcat gcgacccatt ctaactcctt tatccttcaa
    23221 ccaatcatca gcttttctgt aaaatatatc taaaatatta tcttttcatt atagcatatt
    23281 ttcaatttga attgtttcaa taggtatcaa aaaaacacca gctggtaaac tggtgtctct
    23341 aatgaatagc taaataataa atcgttgctt gccacatttt caagattgtt tttccgcttt
    23401 tccaaagcca aaatagggca aatagcagga aaacaactgc cactactacg ttaatcaagc
    23461 cttttccaac caagaaaaac ttgaaaaaga agacggtcac acaagtgagc aaggcaagga
    23521 gtaagacatg aatcagaact cccaaccagc ccagccaata gcgaattcca aagggagggt
    23581 gtttcttttc atcgaagtct gctagaccag tcaaaaactc aactagcaac tcaccaaaaa
    23641 attccatact agcctacctt tcttagctgt cggtaatatt tggttcgtcg aatcatcatc
    23701 ttgatagcct taaaggaaag taaggttagc atactagcca cgaatagaca aaaaaggaat
    23761 atcacaacca atggctgttt atactgatga tagaccataa ttgaaccacc agtaaaggcg
    23821 ataaaatagg atgccaaagt cacaaaattg agccaaatgc aagccaccag tcccaaccaa
    23881 taacgaaatc cgaaaggttt gtattgactg tcttcataaa atacaagaaa aaatgatgaa
    23941 aaagaaagca atatcaaaaa agaacgccaa atcggaaccg ctaccatacc aacacctcca
    24001 agtccattct agcatattta cgaataattg caaagaggga gtgggacaga actcgcaaat
    24061 tgttaaaaga gttcgtcaac aagtccttat ttctagttgt tgagctgaaa tagtctatcc
    24121 ccagactgtt tcactccc
//
LOCUS       DASFQD010000019        23947 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.019, whole genome shotgun sequence.
ACCESSION   DASFQD010000019 DASFQD010000000
VERSION     DASFQD010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 23947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23947
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.019"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            104..439
                     /gene="gpsB"
                     /locus_tag="U1021_000605"
     CDS             104..439
                     /gene="gpsB"
                     /locus_tag="U1021_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division regulator GpsB"
                     /protein_id="HEM4711178.1"
                     /translation="MASIKFTTKDIFEQDFKIGFRGYDQDEVNDFLDDIMKDYDAYEA
                     IIKELKGEIARLKAQAANSPKTTLPTEESNDVLRTERPSSATNFDILRRLNRLEKEVF
                     GKQIVQDQE"
     gene            578..942
                     /gene="rnpB"
                     /locus_tag="U1021_000606"
     ncRNA           578..942
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="U1021_000606"
                     /product="RNase P RNA component class B"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00011"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00011"
     gene            995..2161
                     /locus_tag="U1021_000607"
     CDS             995..2161
                     /locus_tag="U1021_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEM4711179.1"
                     /translation="MKKQFELIATVAAGLEAVVGREIRNLGYECQVENGRVRFQGDVK
                     SIIETNIWLRSADRIKIIVGQFPAKTFEELFQGVFNLDWGNYLPLGCKFPISKAKCVK
                     SKLHNEPSVQAISKKAVVKKLQKHFSRPEGVPLQEMGAEFKIEVSILKDVATVMIDTT
                     GSSLFKRGYRVEKGGAPIKENMAAAILQLSNWYPDKPLIDPTCGSGTFCIEAAMLAKN
                     IAPGLKRSFAFEEWPWVEDQLVAALRKEAQASIKTDLVLDIAGSDIDARMIEIAKKNA
                     FAAGVEQDIVFKQMRVQDLRTDKINGVIISNPPYGERLLDDEAIVTLYREMGETFEPL
                     KTWSKFILTSDELFETRFGQQADKKRKLYNGTLKVDLYQFFGQRVKRQVQEVQG"
     gene            2171..3625
                     /locus_tag="U1021_000608"
     CDS             2171..3625
                     /locus_tag="U1021_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711180.1"
                     /translation="MGEKNSHHLPLDEEKVLDFDVAKDLTIEEAVKKHKEIEAGVTED
                     DGLLDRYIKQHRAEIESQKFETKINHLPLVEVADEEKNQGHESAEEVEANESSLTEVS
                     EEIAPIVEELSVTPMETLEETVIASTVAMEGLSSVADDSSLELEEDEAEDLDHSEGAD
                     RDQKKKFYFWSAVGLSMIGVMATALVWMNSVNKSNTATSSSSTSTSQTSSTASSSTDA
                     NVTAFEQLYNSFFTDSSLTKLKNSEFGKLAELKVLLEKLDKNSDSYTKAKEQYDHLEK
                     AIAAIQAINGQFDKEVVVNGEIDTTATVKSGESLSATTTGISAVDSLLASVVNFGRSQ
                     QEVASATVASEVAATSNQGADETVSTGVPATTEVASTTVSGSTTDFGIAVPAGVVLQR
                     DRSRVPYNQAMIDDVNNEAWNFNPGILENIVTISQQRGYITGNQYILEKVNIINGNGY
                     YNMFKPDGTYLFSINCKTGYFVGNGAGHSDALDY"
     gene            complement(3846..4328)
                     /locus_tag="U1021_000609"
     CDS             complement(3846..4328)
                     /locus_tag="U1021_000609"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002885585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HEM4711181.1"
                     /translation="MKKEVTVESFELDHTIVKAPYIRLISEEVGPKGDIITNFDIRLI
                     QPNENAMDTAGLHTIEHLLAKLIRQRIDGLIDCSPFGCRTGFHMIMWGKQDSEKIAQV
                     IKSSLEEIAEGITWEDVPGTTIESCGNYKDHSLHSAKEWAKLILSQGISTDAFERKPI
                     "
     gene            4457..6070
                     /locus_tag="U1021_000610"
     CDS             4457..6070
                     /locus_tag="U1021_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HEM4711182.1"
                     /translation="MNIITVVVTLVSALIGLVLGYFAISLKMKSAKETAELTLLNAEQ
                     EASNVRGRAEEQAEVILKTAERDRQTLKKELLLEAKEEARKYREEIAEEFKSERQELK
                     QIESRLTERATSLDRKDDNLTNKEKTLEQKEQSLTDKAKHIDEREQEVVKLEEQKALE
                     LERVAALSQEEAKEIILTDTRDKLTHEIATRIKEAEREVKERSDKMAKDLLAQAMQRI
                     SGEYVAEQTITSVHLPDDAMKGRIIGREGRNIRTFESLTGIDVIIDDTPEVVVLSGFD
                     PIRREIARMTMETLLQDGRIHPARIEELVEKHRVEMDNRIREYGEAAAYEVGAPNLHP
                     DLIKIMGRLHFRTSYGQNVLRHSIEVAKLAGVLAAELGENVNLARRAGFLHDVGKAID
                     REVDGSHVEIGTELAKKYKENPIVINAIASHHGDVEATSTIAVIVAAADALSAARPGS
                     RRESMEAYIKRLQDLEEIANSFEGIKQSYAIQAGREIRIIVHPNKVTDDQITILAHDV
                     REKIENNLDYPGNIKITVIRETRATDVAK"
     gene            6225..6851
                     /gene="gmk"
                     /locus_tag="U1021_000611"
     CDS             6225..6851
                     /gene="gmk"
                     /locus_tag="U1021_000611"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEM4711183.1"
                     /translation="MKERGLLIVFSGPSGVGKGTVRKEIFESSDNKFEYSVSMTTRPQ
                     RPGEVDGVDYFFRSREEFEDLIRQGQMLEYAEYVGNYYGTPLTYVNETLDKGIDVFLE
                     IEVQGALQVKKKVPDGVFIFLTPPDLEELQDRLIGRGTDSEEVIAQRIERAKEEIALM
                     REYDYAVVNDEVPLAAERVKRIIEAEHFRVDRVIGRYDEMIREQIAER"
     gene            6875..7189
                     /locus_tag="U1021_000612"
     CDS             6875..7189
                     /locus_tag="U1021_000612"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001817694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEM4711184.1"
                     /translation="MMLKPSIDTLLDKVPSKYSLVILEAKRAHELEAGAKPTQEFTSV
                     KSTLRALEEIESGNVVIHPDPEAKREAVRRRAEEAKRLAEEEERKIKAQIAKEKEEGE
                     KI"
     gene            7534..9924
                     /locus_tag="U1021_000613"
     CDS             7534..9924
                     /locus_tag="U1021_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEM4711185.1"
                     /translation="MLAQIIVDVPLMQTDQAYSYRVPAELEEGLKVGVRVHVPFGKGN
                     RLIQGIVVDLIDENDENNLQDLKELAEVLDYSPVLNQEQFWLADQMRKSVFSYKITLL
                     KSMLPSLLNSSYDKLIRPGLGLEMAEQISLFGDKEQIRFSDLDVTEQGKIMRLAQSGK
                     ILVDYVAKDKKQIKTEKWYRVCLEKLREADISNRAKKRQQLKKFLLEHSEDQLLSNLK
                     SDYSADTLRYFQEKGYIEVWEEEVSRTQGVFDKVEKTQALDLNPEQAIAVREIVASIG
                     QESQTFLLQGVTGSGKTEVYLQVIDRVLKMGKTAIMLVPEISLTPQMTNRFISRFGQQ
                     VAILHSGLSDGEKYDEWRKIEAGNAQVVVGARSAIFAPLTNLGVIIIDEEHEATYKQD
                     SNPRYHARDVAKLRADYNRATLVLGSATPSLETRARASRGVYGRLTLNQRANPLARIP
                     EVEVVDFRDYIGQQEASNFTPVLIDKIREKLARKEQVVLMLNRRGYSSFVMCRDCGSV
                     DQCPNCDISLTLHMDTKTMNCHYCGFQKGIPQTCPNCQSRSIRYYGTGTQKAYDELQE
                     LLPEARILRMDVDTTKKKGAHEDLLERFGRGEADILLGTQMIAKGLDFPNVTLVGVLN
                     ADTALNLPDFRSSERTFQLLTQVAGRAGRADKEGEVLIQTYNPNHYAIAFAKEQDYEG
                     FYRYEMGIRKNLGYPPYYFTVGLTFSHKSEEFVVKKAYEAVAFLRQHLTDAIQILGPT
                     PKPIARTHNLYHYQIILKYRHEDRLEEVLNQILDWTQERENQDLRLIIDNEPQNMM"
     gene            10055..10993
                     /locus_tag="U1021_000614"
     CDS             10055..10993
                     /locus_tag="U1021_000614"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEM4711186.1"
                     /translation="MTKLIFMGTPAFSAMVLRGLLADGNYNILAVVTQPDRAVGRKKV
                     IQMTPVKEVALEYNLPVYQPEKLSGSQEMDELMNLGADGIVTAAFGQFLPTKLLNSVD
                     FAVNVHASLLPKYRGGAPIHYALINGDERAGVTIMEMVKEMDAGDMISSDSIAIEESD
                     NVGTLFEKLAVVGRDLLLQTLPAYIAGDLKPVAQNPEQVTFSPNIQPEEEVLDWNKTA
                     RQLFNHIRGMYPWPVAHTYWQGERFKIQEAVEAEGEGPVGRVIARSKKELIIATGQGA
                     LSLKTVQPAGKPKMTIADFLNGAGRDIAVGDQFGDQ"
     gene            10980..12293
                     /gene="rsmB"
                     /locus_tag="U1021_000615"
     CDS             10980..12293
                     /gene="rsmB"
                     /locus_tag="U1021_000615"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HEM4711187.1"
                     /translation="MVINKHETARSLALSVLEQVFDQGAYSNIALNKALESSRLSAQD
                     KGLATELVYGTVSRKITLEWYLAHFIEDREKLDTWVYYLLMLSLYQLVYLDKLPTHAV
                     VNEAVNIAKRKPGTDKFVNAILRKLSQDSLPKPADIKRKNKRLSVQYSVPVWLVQTLI
                     AEYGDERAEKIFQSLHDRNKASVRVTDGQQVEQLAEELGAQHSQLSPVGLVKSHGHFA
                     GTDYFKKGLITIQDETSQLVAPTLGIQGDEIILDACAAPGGKTCHMASYLTDGKVYAL
                     DLYDHKLNLIEENARRLGLEDKIETKGLDASRVHEEFGPDTFDKILVDAPCSGIGLIR
                     RKPDIRYNKASMDFDSLKTIQLQILDSVCQSLKIGGIITYSTCTIIAKENQEVIQEFL
                     QNHPNFEQVTLEHPQTDIMVDGCLLITPEQYKTDGFFIGQLRRKS"
     gene            12331..13068
                     /locus_tag="U1021_000616"
     CDS             12331..13068
                     /locus_tag="U1021_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HEM4711188.1"
                     /translation="MEIALLTDVGQKRSNNQDYINRYKNRAGIDLVVLADGMGGHRAG
                     HIASEMAATDLGAAWVDTQLVTLNDVREWMVAIIDAENQKIHELGQTEEYKGMGTTLE
                     AVVVIDNQMIYAHVGDSRVGLIRDGEYTRLTNDHSLVGALVRAGQLTEEEAQRHPQKN
                     IVTQSIGQAEPIEPDIALKTLEVGDYVLINSDGLTNMIPTEDIRDIVLSDVSIESKVE
                     TLVRFANNAGGLDNITVGLLHITEEAR"
     gene            13068..15062
                     /gene="pknB"
                     /locus_tag="U1021_000617"
     CDS             13068..15062
                     /gene="pknB"
                     /locus_tag="U1021_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014635866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Stk1 family PASTA domain-containing Ser/Thr
                     kinase"
                     /protein_id="HEM4711189.1"
                     /translation="MIQIGKIFAGRYRIVRQIGRGGMADVYLARDLILDGEEVAVKVL
                     RTNYQTDQIAIQRFQREARAMAELDHPNIVRISDIGEEDGQQYLAMEYVNGLDLKRYI
                     KENAPLSNDVAVRIMGQILLAMRMAHTRGIVHRDLKPQNVLLTSNGVAKVTDFGIAVA
                     FAETSLTQTNSMLGSVHYLSPEQARGSKATIQSDIYAMGIILFEMLTGRIPYDGDSAV
                     TIALQHFQKPLPSVREENANVPQALENVVLKATAKKLNERYKSVAEMYADLASALSMD
                     RQNEPRVELEGNKVDTKTLPKLSQANVETKVPHTNSSAQVSATDKGSGKKEVAKSGNK
                     PVSKPRPGIRTRYKVLIGAILLTVIAAGLMFFNAPRTVTVPDVSGQTVEKATEMIEVA
                     GLEVGNITEEATATVDEGLVIRTSPAAKTTRRQGSKIDIVVATAALASIPDVVDKESD
                     TARQELEALGFQVTIKEEYSEKVAQGLVIKTDPGANSSAEKGAKITLYVSKGVAPQVV
                     PNVVGKSQENATQILQTAGFSIGTITQEYSSSVTAGQVISTDPVANTELAKGSIINLV
                     ISKGKELIMPDLTSGNYTYSQARSQLQALGVNAESIEKQEDRSYYSTTSDIVIGQYPA
                     AGATIDGTVTLYVSVASTRTSSDSSAGSSTSTSTSTGSGQ"
     gene            15474..16178
                     /locus_tag="U1021_000618"
     CDS             15474..16178
                     /locus_tag="U1021_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall-active antibiotics response protein"
                     /protein_id="HEM4711190.1"
                     /translation="MEKMRKVQFFLLIESMIFTMAAFDVVANEASRTLLLFSALLLVI
                     WYFLGRKVNSVLLVSSLSLLFSVFVLNPFFIIGIMLLVVYMLINFFSRYEKRNQYTHI
                     VFSDYSLQVQKEKNRWFGNHDHSQDRFGFEDINIVRLFGNDVVDLDKTVLVGRDNIVV
                     IRKTFGRTKIIVPIDVEVALSATSIYGRVSFLGESYWDLRNESIAVNSPDYQESHKRV
                     KVVTNNILGDVEVVRV"
     gene            16175..17191
                     /locus_tag="U1021_000619"
     CDS             16175..17191
                     /locus_tag="U1021_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM4711191.1"
                     /translation="MRKRTYLLLAWFACLIVFVVIASTLPLLNYSLLDVTLWISTEQL
                     VFTLILLVIVLTLFLAVMVQTVSLASTQVMRTKLQAILKNKSIRTDTESDQLLLQLSD
                     KVRNLTRQVQLVDNQDLVKKEEIVEGERKRIARDLHDTVSQELFATSMILSGLSSNLS
                     TLPQETLQEQLMLVKDMIESAQRDLRILLLHLRPSELESKTLVEGFELILREVSDKSN
                     IIVHFQHEVEELPKLIEEHLFRIAQEIISNTLRHAKAKHLDVYLLQKETELQLKMTDD
                     GIGFQQGADDELSYGLQNIRERVEDMAGTIKIRTAPNKGVAIDIRIPLLKGKEDEYDS
                     SDAG"
     gene            17163..17804
                     /locus_tag="U1021_000620"
     CDS             17163..17804
                     /locus_tag="U1021_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4711192.1"
                     /translation="MNTIRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAK
                     ALEVKPDVIVMDLVMPKMTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARG
                     YMLKTSSADEILAAIRKVALGEYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLA
                     KGYDNQRIADESFISLKTVKTHVSNILSKLAVSDRTQAVVYAFQHGLVAQEDQ"
     gene            17854..19254
                     /locus_tag="U1021_000621"
     CDS             17854..19254
                     /locus_tag="U1021_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM4711193.1"
                     /translation="MDAKLRYKAKKIKIVFFDIDDTLRVKNTGYIPESIQQVFNSLKE
                     KGILTGIASGRTPYGLVPEIKALKPDFFAMINGSYVEDAKGQVVYHQPMPQNLVESVL
                     NWAKEIGIEYGMLGSQKGTLSARTDRISQVIDLIYEGLETNPTFYKENDIYQLLTFEK
                     DGHEVELPEELQAELRSVRWDAISSDIVLKGSSKATGVAKVVEKLGLKPENVLVFGDG
                     LNDIELFDYAGISIAMGHSHPELQKHADYITKKVEEDGIFDALEKLGMVEKEKYFPQL
                     DLENVTGPVAHIKTNHGKLTVKLFPEIAPKTVANFVALSKDGYYDGIIFHRIIKDFMI
                     QGGDPTGTGMGGESIYGTAFEDEFSMEAFNLRGALSMANAGPNTNGSQFFIVQNQNFP
                     YNAKELERGGWPKEVAEAYVKNGGTPHLDQRHTVFGHLVDEESFVVLDAIAAVATDSA
                     DRPHEDVVIETIEIED"
     gene            19256..19627
                     /locus_tag="U1021_000622"
     CDS             19256..19627
                     /locus_tag="U1021_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HEM4711194.1"
                     /translation="MKIGDKLKGTVTGIQPYGAFVQLENGTTGLVHISEIKTGFVDNI
                     YDHLKLGQEVLVQVVDFDEYTEKASLSIRTLEEEQQKIPRHHRFTNERNKIGFSPLAK
                     QLPKWIEEAKGYLKEHKEKKV"
     gene            complement(19653..20579)
                     /gene="cysK"
                     /locus_tag="U1021_000623"
     CDS             complement(19653..20579)
                     /gene="cysK"
                     /locus_tag="U1021_000623"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEM4711195.1"
                     /translation="MAIYQNITQLVGKTPVIKLNNIVPEGAAEVYVKLEAFNPGSSVK
                     DRIALAMIEDAEKAGTIKPGDTIVEPTSGNTGIGLAWVGAAKGYKVIIVMPETMSVER
                     RKIIQAYGAELVLTPGSEGMRGAIAKAKEIAEEKNGWVPFQFANPSNPKVHEDTTGQE
                     ILEDFGTTGLDAFVSGVGTGGTVSGVSHVLKTANPDIAIYAVEADESAVLSGEAPGPH
                     KIQGISAGFIPDTLDTSAYVGIIRVKSDDALATGRAIGGKEGFLVGISSGAAIHAAIE
                     VAKELGTGKKVLAILPDNGERYLSTALYEFND"
     gene            complement(20669..21301)
                     /locus_tag="U1021_000624"
     CDS             complement(20669..21301)
                     /locus_tag="U1021_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEM4711196.1"
                     /translation="MKEFKTIREDGIVEEEIKKSRFICFMKRVTSEEEARDFINKIKK
                     EHYKATHNCSAFVLGENMEIKRSSDDGEPSGTAGVPMLTVLENHELTNVATVVTRYFG
                     GIKLGAGGLIRAYAGAVANAVKEIGVVEVKEQEGISISMSYAQYQEFANWRTEQGLEE
                     FDTQFTTEVSTMIFVDKEFLEQTLASLTDFYHGKVSAEKANSRIVEVPVY"
     gene            21358..22650
                     /locus_tag="U1021_000625"
     CDS             21358..22650
                     /locus_tag="U1021_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4711197.1"
                     /translation="MKELENYYGRLFTKYQLTAKEREIAEKVPSITKKNNCFRCGTTF
                     EEENKLPNDAYYCRACLLLGRVRSDEKLYHFPQKDFPITKCLKWKGQLTDWQQRISDG
                     LVANVKNNRATLVHAVTGAGKTEMIYHTVASVIDKGGAVCLASPRIDVCIELYKRLQN
                     DFSVPISLLHGESEPYFRTPLVVATTHQLLKFYQAFDLVLIDEVDAFPYADNPMLYQA
                     ADNAVKEDGVQVFLTATSTDELDKKVRTGKLSRLSLPRRFHGNPLVVPQKVWFSKFDD
                     TLKKNRLVPKLKKAIEEQRTSGFPLLIFVPEISKGQEFTKIMKKTFPEETIGFVSSQT
                     ENRLEIVEGFRKREITVLISTTILERGVTFPCVDVFVVQANHYLYTSSSLVQIAGRVG
                     RSMERPTGLLQFYHEGSTGAIEKAIAEIKQMNKEAGYV"
     gene            22643..23308
                     /locus_tag="U1021_000626"
     CDS             22643..23308
                     /locus_tag="U1021_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEM4711198.1"
                     /translation="MSNCLLCAQAMKNKTRFSDLIFFSKEKSGICEECFSTFEEIAEQ
                     HCPHCYKNGESESCKDCQYWQNQGKPVVHTALYRYNQAMAHYFSRYKFQGDYVLRNIF
                     AKKLRIALSQFPDYTIVPIPISQKRLLERGFNQVEGLLSATNIPYQSLLGKYESQKQS
                     SKNRAERLEAKQMFYLLDEKEVPEKILLFDDIYTTGATIQLAVELFMKIGRKEIKTFS
                     LTR"
     gene            23386..23928
                     /gene="raiA"
                     /locus_tag="U1021_000627"
     CDS             23386..23928
                     /gene="raiA"
                     /locus_tag="U1021_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000599099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HEM4711199.1"
                     /translation="MIKFSIRGENLEVTDALRTYVEEKVAKIEKYFNEEQELNAKVNL
                     KVYRDKRAKVEVTIPVGAVTLRAEDISQEMYGSIDLVVDKIERQIRRNKTKIERKHRQ
                     KVATGQVFTDELVEQTGEEVKVVRTKQVDLKPMDMEEAVLQLELLGHDFFIYTDANDG
                     TTNVLYRREDGDLGLLEVRQ"
BASE COUNT         7436 a         4392 c         5481 g         6638 t
ORIGIN      
        1 aatgaggagg ctgaaaattt ttcaaattct gagtgatttg acttgatttt tccctatttt
       61 tttaatataa taggagtagt gacgttttag attagggaga gagatggcaa gtattaaatt
      121 tacgacaaaa gatattttcg agcaagattt taaaattggt tttcgtggct atgatcaaga
      181 tgaagtgaac gattttcttg atgatattat gaaagactat gatgcttatg aagcgattat
      241 caaggaatta aaaggcgaaa ttgctcgatt gaaagcgcag gcagcaaatt ctcccaaaac
      301 aactcttcct actgaagaat cgaatgacgt attgcgtaca gaacgtccat cttcagcgac
      361 aaactttgat attctccgcc gtctgaatcg tctggagaaa gaagtatttg gaaaacaaat
      421 cgttcaggat caagaataga aaattgtaca cctaaactga cactttattc gcagttattt
      481 tcttgtgcac aaatacattc tgtatttgtg tcagagatat tccttgcttt aaagtggctt
      541 gctttgtaga tacaacttct aagataatta aggtgcaatt tttggataat cgcgtggtag
      601 ttttctacca tgaggaaagt ccatgctagc actggctgag atgccagtag tgtttgtgct
      661 aggcgaatca ataagcctag ggacgccctt gggcgttacg gcggttaaaa tggctaagtc
      721 ttttgatatg ccagagtaga tctgaaagtg ccacagtgac gaagttttta tggaaacgta
      781 aaaaatggaa cgcggtaaac ccctcaagct agcaacccaa actttggtcg gggcatggga
      841 tggatggaaa tgaacagaaa tcctgactgt ttagacagta gacagatggt tatcgaaggt
      901 ggtagaacct agtaccaccg gaacaaaaca tggcttacag aaaattgcat aaaataggta
      961 gctagctctg ctagctttta ttgtagagga aaaaatgaaa aaacaatttg agttgattgc
     1021 aacggtagca gctggtctgg aagcggttgt gggtcgagaa attcgtaatc ttggctatga
     1081 atgtcaagtg gaaaatggcc gtgttcgatt ccaaggagat gtaaaatcca ttatcgaaac
     1141 caatatctgg ctgcgttcag cagatagaat taaaatcatt gttggacaat ttccagcaaa
     1201 gacttttgaa gagttgttcc aaggagtttt taacttggac tggggaaatt acttgcctct
     1261 aggctgcaag ttccctattt ccaaggccaa atgtgtcaaa tcgaaattgc ataatgaacc
     1321 aagtgtgcag gctatttcta agaaagcagt tgtaaagaaa ctgcagaaac acttctctcg
     1381 tcccgaaggg gttcccttgc aagagatggg ggcagagttt aaaattgaag tgtcgatttt
     1441 gaaagatgtg gcgacagtca tgattgatac gacaggttct agtttgttca aacgtggtta
     1501 tcgggtggaa aaaggtggcg caccaatcaa agaaaatatg gcagctgcta ttttgcaatt
     1561 atcgaattgg tatccagata aaccgcttat tgacccgact tgcggatcgg gaactttctg
     1621 tattgaggcg gctatgttgg caaaaaatat agctccaggt ttgaagagaa gttttgcatt
     1681 tgaggaatgg ccgtgggttg aggatcaatt ggtagctgca ttacgcaaag aagcgcaagc
     1741 ttctatcaaa acagatttgg tattagatat tgctggatca gatattgatg ctcgtatgat
     1801 tgaaattgcg aagaagaatg catttgcggc aggagttgag caggatattg ttttcaagca
     1861 aatgcgtgtg caagacttgc gtacagataa aattaatggt gtcattattt ctaatccacc
     1921 ttacggagaa cgtttgttgg atgatgaagc cattgttacc ctgtatcgag aaatggggga
     1981 gacttttgaa ccactcaaaa catggtctaa gtttattcta actagtgatg agttgtttga
     2041 aacccgtttt ggacagcaag cggataagaa acgcaaactg tataatggta ccctaaaagt
     2101 ggatctttat caattttttg gtcaacgagt gaaacgtcaa gtgcaagaag tgcaaggata
     2161 ggaggacatc gtgggagaaa aaaatagtca tcatcttcct ttggatgagg agaaagtttt
     2221 agattttgac gtggcgaaag atttaacaat cgaagaagca gtcaaaaaac ataaggagat
     2281 tgaagcgggt gtgacagaag atgatggtct cttggatcgt tacatcaagc aacaccgcgc
     2341 agaaattgaa tctcaaaaat ttgaaaccaa aatcaatcat cttcctttag ttgaggtggc
     2401 tgatgaggaa aaaaatcaag gacatgaaag cgcggaagag gtagaagcaa atgagtcttc
     2461 tcttacggaa gttagtgagg agattgctcc tattgtagaa gaactttcgg taactccgat
     2521 ggaaaccttg gaagaaacag tgattgcaag tactgtagca atggaggggt tatcttcagt
     2581 ggcagatgat tctagtttag aattggaaga agatgaagcc gaagacttgg accatagtga
     2641 gggcgcagat agggaccaga aaaagaaatt ttacttctgg tcagcagtag ggctttcaat
     2701 gattggtgta atggcgacgg cgctggtttg gatgaattcg gttaacaaat cgaatactgc
     2761 gacttcttca agttcaacaa gtacaagcca gacgtcatca acagcatcaa gttcgacaga
     2821 tgcgaatgtg actgcttttg aacagctcta taatagtttc tttacggata gtagtttgac
     2881 caagctaaaa aattcagagt ttggcaaatt agcagaactg aaagtgctgt tggaaaaatt
     2941 ggataagaat tcggacagtt ataccaaagc taaagaacag tatgatcatc ttgaaaaagc
     3001 cattgcagcc attcaggcca ttaatggtca gtttgataaa gaagtcgttg ttaatggtga
     3061 aattgataca acggcgacgg ttaaatcagg agaatctctt tctgcgacaa cgacagggat
     3121 tagtgcggtt gacagtctat tggcatcggt cgtgaatttt ggtcgttcac aacaggaagt
     3181 tgcttcggct acggtagcaa gcgaggttgc agccacaagc aaccaaggtg ctgatgaaac
     3241 tgtatctact ggtgtaccag cgacaacaga agtcgcttca acaacggttt caggctcaac
     3301 aaccgacttt ggtattgccg tgccagctgg tgtcgtcttg caacgtgacc gcagtcgagt
     3361 tccttataat caagcgatga ttgatgatgt aaacaatgaa gcatggaatt tcaatccagg
     3421 tattcttgaa aatattgtga ctatttcgca acaacgtggg tatataacag gcaatcaata
     3481 tatcttggaa aaagttaata ttatcaacgg caatggctac tacaatatgt ttaaaccaga
     3541 tgggacctac ttgttctcta taaattgtaa gacaggttac tttgtcggta atggtgctgg
     3601 tcattctgat gccttggatt attaagtaaa aaagcggttt agtcgcttca gattgaagaa
     3661 aaagtccatt ttggacaatt ttcttcaatc ttttttcttt atgttgaaaa taaaaaaact
     3721 ctcagaaacg ccgaaatatc aatgtttcta agagtttaat gacttgctat ctttcgcaaa
     3781 cttcttcaat tttttatatt tttaggagtt tgtctacgtt ctgagcggtg tatccgcttt
     3841 ttttgttaga ttggttttct ttcaaaggca tcggtagaga ttccctgaga aaggattagt
     3901 ttggcccatt ctttagctga atgaaggctg tggtctttgt agttaccaca tgattcaatg
     3961 gttgttccag gaacatcctc ccaagtgatg ccttctgcaa tttcttccaa actcgatttg
     4021 atgacttgag caatcttttc agagtcttgt tttccccaca taatcatgtg gaaacctgtc
     4081 cgacacccga aaggagagca gtcgattagc ccatcgatgc gctggcgaat tagtttagct
     4141 aatagatgct caatggtatg tagaccagct gtatccattg cattttcgtt gggttggata
     4201 aggcgaatat caaagtttgt aataatgtct ccttttggtc cgacttcttc agaaattaag
     4261 cggatgtaag gtgcttttac aatagtgtgg tctagctcga agctttcgac agtgacttct
     4321 tttttcatgg tttcctccaa ataagtgatg aatttattat accatatttg acaatttgga
     4381 attgtgaaat cgtttcaaat atgataaaat agatacagat tttgtgaaaa tcgaattata
     4441 aaaaagaggt agaaatatga atatcattac agtagtagtg acacttgttt ctgctctcat
     4501 tggtttagta ttaggttact ttgccatttc tttgaagatg aaatctgcaa aagaaactgc
     4561 agaattgaca cttttaaacg cagaacaaga agctagtaat gttcgtggtc gagcagaaga
     4621 gcaagctgag gttattctaa aaacagctga gcgcgatcgc cagaccttga aaaaagaatt
     4681 actcttggaa gctaaggaag aagctcgtaa gtaccgagaa gaaattgcag aagaatttaa
     4741 gtcagaacgt caagagttga agcaaattga atcacgcttg acagagcgtg cgaccagttt
     4801 ggaccgcaaa gacgataatt tgaccaacaa ggaaaagact ttggaacaaa aggaacaaag
     4861 tctgaccgat aaagctaagc acattgatga gcgtgaacaa gaagttgtaa aactcgaaga
     4921 acaaaaagct ttggagttag aacgagtggc ggccctcagt caagaagaag caaaggaaat
     4981 catccttacc gatacacgtg ataaactgac gcatgaaatt gcgactcgta tcaaggaagc
     5041 agagcgtgaa gtaaaagaac gttctgacaa gatggcaaag gacttgttag cccaagcgat
     5101 gcaacgtata tcaggtgaat atgtggctga gcagacgatt acatcggttc atttaccgga
     5161 tgatgcgatg aagggacgga ttattggacg tgagggtcga aatattcgta cctttgaaag
     5221 tctcacaggt atcgatgtta tcattgatga tacaccagaa gtggttgttc tatcaggttt
     5281 tgatccgatt cgccgtgaga ttgcccgtat gaccatggag accttgcttc aagatggtcg
     5341 tattcatcca gctcgtattg aggagttggt tgagaaacat cgtgtagaga tggataaccg
     5401 tattcgtgag tacggggaag ctgctgctta tgaagttggg gcaccaaacc ttcatccaga
     5461 cttgattaaa atcatggggc gtttgcattt ccgtacctct tatggacaaa atgttcttcg
     5521 ccactcaatc gaagttgcta aattagcagg tgtacttgct gctgaattgg gcgagaatgt
     5581 gaatttggca cgtcgagctg gtttcctaca tgacgttggt aaagctattg accgtgaggt
     5641 ggatggaagc cacgttgaaa tcggtacaga attagctaag aaatataaag agaatccaat
     5701 tgttatcaat gcgattgcta gtcaccatgg cgatgtagaa gcaacaagta ctattgcagt
     5761 cattgtggct gcggcagatg ctctgagcgc tgctcgtcca ggttcacgtc gtgaatctat
     5821 ggaagcctac atcaaacgtc tgcaagactt ggaagaaatc gccaacagtt ttgaagggat
     5881 taaacaatcc tatgctattc aggctggtcg tgaaattcgg attatcgttc atcctaacaa
     5941 ggtcactgat gatcagatta ccatcttggc ccatgatgtt cgtgagaaaa ttgaaaataa
     6001 tctggattat ccaggaaata tcaaaatcac agttatccgt gaaacaagag caacagatgt
     6061 tgctaagtaa atgtagaaga gtccgaaggg ctctttttct actggctcaa agttcgtttt
     6121 gggttgggaa tagaaaatag aaaatatttt aatcgtattt aaaagcagtt gaaattcatg
     6181 ctaaattttg ttacactaga atgaaagatt taaaaggaga tatcatgaaa gagcgaggct
     6241 tactcattgt cttttctggt ccatctggtg ttggaaaagg aacagttcga aaggaaattt
     6301 ttgaaagctc tgataataaa tttgaatatt ctgtatccat gacgacacgt ccacagagac
     6361 cgggagaagt tgatggagtt gactatttct tccgtagtcg tgaggaattt gaagatttga
     6421 ttcgccaggg tcaaatgttg gaatatgcag agtacgttgg aaattactat ggaacacctc
     6481 tgacctatgt caatgaaact cttgataagg gaattgatgt ctttttagaa attgaagtac
     6541 agggtgccct ccaagtgaag aaaaaggttc cagatggggt gttcattttc ttgacaccac
     6601 ctgacttgga ggagttgcag gatcgcttga ttggtcgcgg aacggatagt gaggaagtta
     6661 ttgctcaacg tatcgaacgt gccaaggaag agatcgcctt gatgcgtgag tatgattatg
     6721 cagttgtgaa cgatgaagtc ccgttggctg ctgagcgtgt caagcgtatt atcgaagcag
     6781 aacatttccg tgtagaccga gtgattggtc gctacgatga aatgattcgt gaacagatag
     6841 cagaacgata aaagaaagaa gagagaatcg cattatgatg ttgaagccgt caattgatac
     6901 cttgttggat aaggtaccat ctaagtattc tttggttatt cttgaggcta agcgtgccca
     6961 tgaattggaa gcaggtgcca agccaactca agaattcacc tcagtgaaat ccaccctacg
     7021 cgccttggaa gaaattgaat caggtaatgt agtcatccac ccagacccag aagcgaaacg
     7081 tgaggctgtt cgtcgccgtg ccgaagaggc taaacgtttg gcggaagaag aagagcgtaa
     7141 aatcaaagct caaattgcta aagaaaaaga agaaggcgaa aagatttaga aacaagactc
     7201 ggttgggatt gccatccggg tttcttttca ctttcggaat gatgaaagtt ttgacagaaa
     7261 ggaggcaggt catttagttt atcttttaat atttggggag tgggaaagaa ctcgaccaag
     7321 ataaaaagag ttcgtcttcc caccccccac acagttgatt aggctagatt tggagtgcaa
     7381 aacacgaaca aatctgccga tcaaccactg cgctgagatg ttgaaacgaa ctctgagtag
     7441 tggtcctggg ctttttgccc agcctcgtta tacataaagt gaaccttggt cgcatcagtc
     7501 gtggtattag aaggtaaaat aaatggagat ggtatgttag cacagattat tgtagacgtt
     7561 cctttgatgc agacagatca agcttattcc tatcgagttc cagctgagtt ggaagagggg
     7621 ctcaaggttg gcgtgcgtgt ccatgtaccc tttggtaagg gaaatcggct gattcaaggg
     7681 attgtagttg acttgattga tgaaaatgac gaaaataact tacaagactt gaaagagctt
     7741 gccgaggttt tggactatag tcctgttctt aatcaagagc aattttggtt ggcagaccag
     7801 atgaggaagt cggtcttctc ctataaaatt actctcttaa aatccatgct acccagcttg
     7861 ctcaattctt cctatgacaa attgatccgt ccagggcttg gtttggaaat ggcagagcag
     7921 attagtctgt ttggtgataa agagcagatt cgtttttctg acttggacgt gacagagcaa
     7981 gggaaaatca tgcgtctggc ccagtcagga aaaatcttgg tagactatgt ggccaaggat
     8041 aagaagcaaa tcaagacaga aaaatggtac cgagtttgtc tggagaaatt acgagaagca
     8101 gacattagca atcgggctaa aaaacggcag cagttaaaga aatttcttct ggaacactcg
     8161 gaagaccagc ttctttcaaa cctaaaatcg gactattcag ctgatacgct ccgctatttc
     8221 caagaaaaag gctatataga agtttgggaa gaggaagtgt cgcgaactca gggtgttttt
     8281 gataaggtag aaaaaacgca ggccttggat ttgaatccag agcaggccat tgcggttcgt
     8341 gagattgtgg cctctatcgg tcaggaaagt cagacatttc tactgcaagg ggtgacaggc
     8401 tctgggaaga cggaagtcta tctccaggtt attgataggg tcttgaaaat ggggaaaacg
     8461 gctattatgc tggtgcctga aatttccttg acccctcaga tgaccaatcg ttttatttct
     8521 cgttttggcc agcaggttgc cattttacac tcgggcttgt ctgatggtga gaagtacgat
     8581 gagtggcgga agattgaggc ggggaatgcc caggtggttg tcggggcccg ttcggccatt
     8641 tttgcccctt tgacaaactt gggtgttatc atcattgatg aggagcatga agcgacctac
     8701 aagcaggaca gcaatccacg ctatcatgcg cgtgatgtgg caaagttgcg ggcagactat
     8761 aatcgagcga ccctggtctt ggggtctgct acgccgagtc ttgaaacacg ggctcgggct
     8821 agtcgaggag tctatggaag actgactctt aaccagaggg ctaatccatt ggctcgtatt
     8881 ccagaagtgg aagttgtgga tttccgtgat tatatcggtc agcaggaggc tagtaatttt
     8941 acccctgttc tgattgataa gataagagaa aaattggctc gtaaggaaca ggtcgttctt
     9001 atgttgaata ggcgtggtta ttcttctttt gtcatgtgtc gtgattgcgg tagcgttgac
     9061 cagtgtccca attgtgatat ttccctaacg ctccatatgg acacaaaaac gatgaattgc
     9121 cattattgtg gttttcaaaa ggggattcct cagacctgtc caaactgtca aagtcgttct
     9181 attcgttatt atgggacggg tacgcaaaag gcctacgatg aattgcagga gctcttgcca
     9241 gaagctagaa ttttgcgtat ggatgtggat actaccaaga aaaaaggtgc tcatgaggac
     9301 ttgctcgaac ggtttggtcg aggcgaagcg gatattcttc tgggaactca gatgattgcc
     9361 aaaggcttgg attttccaaa tgtgacccta gttggcgtgc tcaatgcgga tacggctctg
     9421 aatttgcctg attttcggtc ttctgagcgg accttccagt tgctaactca ggtagctggt
     9481 cgggctggtc gagctgataa ggaaggggag gtcctgattc agacctataa ccccaatcat
     9541 tatgccattg cttttgccaa agagcaggat tatgaaggtt tctatcgtta tgagatgggc
     9601 attcggaaaa atcttggtta tccaccttac tattttacgg tgggtctaac cttttcgcac
     9661 aagtcagaag aatttgtcgt gaaaaaagcc tatgaagctg tagcctttct ccgtcaacac
     9721 ttaacagatg caattcaaat cttgggaccg acgcccaagc ctattgccag aactcataat
     9781 ctctaccact accagatcat cttgaaatat cggcatgaag accgtttgga agaggtattg
     9841 aatcagattt tggattggac acaggagaga gaaaatcaag atttgcgact gattattgac
     9901 aatgaaccgc agaatatgat gtgaggtcac tattgacctt gcattttttt gttttaagaa
     9961 cctttgatta aggaaaaaat aagcaaaaat gatataatta ggggatagta taattgatat
    10021 gaatcagaaa atgaaaagga gatgagacac gaatatgaca aagttgattt ttatgggaac
    10081 gccagcgttt tcagcgatgg tcttaagagg gctcttagct gatggaaatt ataacatact
    10141 ggcagttgta acccagccag accgagctgt tggacgaaaa aaagtcatcc aaatgacacc
    10201 tgtgaaagaa gtagccttgg aatacaattt accagtctat caaccagaga agctatctgg
    10261 aagtcaagaa atggatgagc tgatgaattt aggagcagat gggattgtga cggcagcttt
    10321 tgggcaattc ctaccaacca aattattgaa ctcagttgac tttgcagtca atgttcatgc
    10381 ctctcttctt cctaaatacc gtggcggtgc ccctatccat tacgctttga ttaacggtga
    10441 tgaacgtgct ggcgtaacca tcatggaaat ggtcaaggaa atggatgccg gtgacatgat
    10501 ttccagcgat agcattgcta ttgaagaaag cgacaacgtc ggcaccttgt ttgaaaagtt
    10561 ggctgttgtt ggtcgggatt tattattaca aaccttacca gcctatattg ctggtgactt
    10621 gaaaccagtc gctcaaaatc cagaacaggt aaccttctca ccaaatatcc agccagaaga
    10681 agaggtactg gattggaata agacagctcg tcaactattt aatcacattc gcggtatgta
    10741 cccgtggccc gttgcccaca cctattggca aggggaacgg tttaaaattc aagaagctgt
    10801 agaagcagaa ggtgaaggac cagttggtcg ggttattgct cgaagcaaga aagaattgat
    10861 cattgcgaca ggtcagggag ccctttctct gaaaactgtc cagccagctg gtaagccaaa
    10921 aatgaccatt gcagactttt taaatggtgc aggtcgagat attgcagtag gagatcaatt
    10981 tggtgatcaa taaacatgaa acagcaagaa gtctagcctt atctgtattg gaacaagtct
    11041 ttgatcaagg tgcttactcg aacatcgctc tcaataaggc tctagaatct tctcgtttat
    11101 cagcacagga caagggcttg gcgaccgaat tggtttatgg gacggtttct cgtaaaatta
    11161 ccctagagtg gtatttggcg cattttatcg aagataggga aaagttggac acttgggtct
    11221 actatctcct catgttgagc ctctaccagt tggtatattt ggacaaattg cctacccacg
    11281 cagttgtcaa tgaggcagtt aatattgcca agcgaaagcc tgggacagat aagtttgtca
    11341 acgctatttt gcgtaagctt agtcaggatt cgttgccgaa accagcagat attaaaagaa
    11401 agaacaaacg tctatccgtt cagtattctg tgccagtttg gttggtccaa accctgattg
    11461 cagaatatgg cgatgaacgt gcagagaaga ttttccaaag cttacatgat cggaataagg
    11521 ccagcgtacg cgtgacagat ggtcaacaag tggagcaatt ggcagaggag ctaggcgccc
    11581 aacactcaca gttatcacca gttgggttgg ttaaatccca tggacacttt gcggggacag
    11641 attatttcaa gaaaggactt atcaccattc aagatgaaac cagtcaattg gtagctccga
    11701 ctttgggtat tcaaggagat gaaatcatct tggatgcctg tgcagctccg ggtggaaaga
    11761 catgtcatat ggcaagttat cttacggatg gaaaagttta tgcgttggat ttatatgatc
    11821 ataaactaaa cctgattgaa gaaaacgcac gtcgtttagg tctagaagat aagattgaga
    11881 ccaaaggtct ggacgccagt cgtgttcatg aggaatttgg tccagatacc tttgataaaa
    11941 tcctagtgga cgccccttgt tcaggtattg gacttatccg ccgtaagcca gatattcgtt
    12001 ataacaaggc atcgatggac tttgattctc taaagactat ccagttgcag atactggaca
    12061 gtgtttgcca aagcttgaaa attggtggta taataaccta tagcacatgt acgattattg
    12121 ctaaggaaaa ccaagaggtt attcaagaat ttctgcaaaa ccatcccaat tttgaacagg
    12181 tgacactaga acaccctcaa acagatatta tggtggatgg ttgcttgttg ataacccctg
    12241 aacagtataa gacagatggc tttttcatcg gtcaacttag acgaaaatcc tagaataaga
    12301 ggaggaagtt gcttagcaac gataaaaatt atggaaattg cattacttac tgatgtagga
    12361 cagaaacgtt cgaacaacca agactatatc aatcgctaca aaaaccgcgc agggattgat
    12421 ttggtcgtgt tagctgatgg aatgggtggt caccgtgccg gccatattgc tagtgagatg
    12481 gcagcaacag atttgggagc tgcttgggtt gatactcaat tagtgacttt gaatgatgtc
    12541 cgtgaatgga tggttgcaat cattgatgct gaaaaccaaa agattcatga acttggacag
    12601 acagaagaat acaaggggat gggaacaact cttgaggcag ttgttgtcat cgacaatcaa
    12661 atgatctatg cccatgttgg agattcacga gttggattga ttagagatgg cgaatataca
    12721 cgtctaacta acgaccattc gctggtaggt gcccttgttc gagctggtca gctcacagaa
    12781 gaagaagcac agcgtcatcc tcaaaaaaat attgtaacgc agtccattgg acaagccgaa
    12841 ccaattgaac cagacattgc tttgaaaact cttgaggttg gagattatgt ccttattaac
    12901 agcgatggct taaccaatat gataccaacc gaggacattc gtgatattgt attgagtgat
    12961 gtttcaattg aaagcaaggt agaaacactt gtacgttttg ccaataatgc aggcggtcta
    13021 gataatatta cagtaggttt gcttcacatt acggaggagg ctaggtaatg attcaaatcg
    13081 gtaagatctt tgccggtcgg tatcgaatcg ttcggcaaat tggtcgaggc ggtatggcag
    13141 atgtttacct agcaagagat ttgattttag atggagaaga ggttgctgtt aaagttcttc
    13201 ggaccaacta tcagacagat caaattgcta tccagcgttt tcaacgtgaa gcgcgtgcca
    13261 tggcagaact tgaccatccc aatatcgttc gtatttcgga catcggtgaa gaagatggtc
    13321 aacagtatct ggctatggaa tatgtcaatg gcctcgattt aaaacgttat ataaaagaaa
    13381 atgcaccact ttccaacgat gttgcggtgc gaattatggg acagattctc cttgctatgc
    13441 gcatggcgca cacgagagga attgtccatc gagatttgaa acctcagaac gtccttttga
    13501 cttccaatgg agtcgctaaa gtaacagact ttggtattgc agttgccttt gctgaaacga
    13561 gtttgacaca aaccaactcc atgttgggtt ctgttcacta tctttcacct gagcaggcgc
    13621 gtggttcgaa agcgaccatt caaagtgata tttatgcgat gggaatcatc ctttttgaaa
    13681 tgttgacggg tcgcattccc tatgatggag acagtgctgt gacgatcgct cttcagcatt
    13741 tccaaaaacc tctcccatct gttagagaag agaatgccaa cgtacctcag gccttagaaa
    13801 atgttgtact aaaagcaacg gcaaaaaaat taaacgagcg ctataagtcg gttgcagaaa
    13861 tgtatgcaga tttagcttcg gctctatcca tggatcgtca gaatgaaccc agggttgaac
    13921 tagaagggaa caaggttgat acaaaaacct tgccgaaact ctcccaagcc aatgttgaaa
    13981 cgaaagtacc gcatacaaac agttctgctc aagtttctgc gacggataag gggtctggta
    14041 agaaagaagt ggcgaagtcg ggaaataagc ctgtttcaaa accaaggcca ggcatacgta
    14101 cacgctacaa agtcttgata ggagctattt tgttaacagt catagcggct ggactcatgt
    14161 ttttcaacgc tccacgaaca gttacagtcc ctgatgtatc tggtcaaacc gttgaaaaag
    14221 ctacagaaat gattgaagtg gcaggattgg aagttggaaa tatcacagaa gaagcgacag
    14281 cgactgtaga tgaaggcttg gtaatacgga cctctccggc tgcaaagacg accagacgtc
    14341 aagggagtaa gattgatatt gtagtagcaa cggctgcgct ggcatctatt ccagatgtgg
    14401 tggataagga gtctgatact gcgcggcagg aattggaggc ccttggtttc caagtgacaa
    14461 taaaagaaga atatagcgaa aaagttgccc aaggactcgt tatcaaaaca gatccaggag
    14521 caaatagttc tgctgagaag ggtgcaaaaa ttacccttta cgtttccaaa ggagtggcgc
    14581 cacaagttgt tccaaacgtt gttggaaaaa gtcaggagaa tgctactcaa attcttcaga
    14641 cagcaggctt cagcattgga accattactc aggaatatag ctcatctgtt actgcaggtc
    14701 aggttatcag cacagatccc gttgccaata cagagttggc aaaaggttct atcatcaatc
    14761 tagttatttc aaaaggaaaa gaattgatta tgcctgattt aacatctggc aattacacct
    14821 attcacaggc gcgtagtcaa ttacaagcct tgggtgtcaa tgcggaaagt attgaaaaac
    14881 aagaagatag aagctattat tcaacgacaa gtgacatcgt cattggacaa tatcctgctg
    14941 ctggagcaac aattgatgga acagttacct tgtatgtctc tgttgcatca accagaacca
    15001 gtagcgattc ttcagcagga agttccacaa gtacaagtac ttcaacaggt agcggacaat
    15061 aaagatgaat aaggttgggg agatacccaa tgtcattaag ttatctaacc tatcacattt
    15121 tgtgatgggt tagttttttt atgttacact aaaaataaaa ggggaaaagt catgctagat
    15181 caaattaaag ctcatttata ctcttcgaaa atcaaaatta tccgttgtca acttgccttg
    15241 atgaactcca gttctatctt cgacttcgtt tcctaggcta cttttgattt tcattgagta
    15301 ttacttgata gtatagacaa tatttagttt tatagccctt tagtttctct ttgattactt
    15361 catcaacttg ctttgaacta aaagtaaact aaaactatat atcagtcagt cctatatttc
    15421 ctactttgga tggagttctt ttacttattt tttgttacaa tagtatagaa aggatggaga
    15481 agatgcggaa agttcaattt tttctactaa tagaaagtat gatttttacg atggcagcct
    15541 ttgacgtggt agccaatgag gccagtcgga ccctgctact tttctctgcc ttattactcg
    15601 tcatttggta cttcctagga agaaaagtca acagtgtttt actggtcagc tccttatctc
    15661 tattattttc ggtctttgtt ttaaatccct tcttcattat tgggattatg ctactagtcg
    15721 tgtacatgct gattaatttc ttttcacgtt atgaaaagag aaaccaatat acccacattg
    15781 tttttagtga ttattctcta caggttcaaa aagagaaaaa tagatggttt ggcaaccatg
    15841 accactcaca agataggttt ggttttgaag atattaacat tgtacgcttg tttggcaatg
    15901 atgtagttga tttggataag actgtattag ttggcagaga taatattgtt gtaattcgta
    15961 aaacgtttgg acggacaaaa attattgttc caattgatgt tgaggttgca ctttcagcaa
    16021 ctagtatcta tggacgagta agtttcctgg gtgaatcata ctgggatttg cggaatgaaa
    16081 gtatagcggt caatagtcct gattatcaag aatcacacaa acgtgtaaaa gtcgttacca
    16141 acaatatact gggagatgtg gaggtggttc gcgtatgaga aaacgtacct acctactcct
    16201 cgcctggttt gcctgtctta ttgtttttgt ggtgattgct tccaccctcc cacttttaaa
    16261 ttattcattg ctagatgtta cgctctggat ttcaacggag cagctcgtgt ttactctcat
    16321 tctactagtt attgttttga ccctttttct agctgtaatg gtacaaactg tcagcctagc
    16381 ctccactcag gttatgcgga cgaagttaca agctatcttg aagaataaaa gtattcgaac
    16441 agataccgaa agtgatcagc tcttgctcca gttgtctgat aaggtcagaa acctcacgcg
    16501 tcaggtgcaa ctggttgaca atcaagattt agtcaagaaa gaagagattg ttgagggaga
    16561 acggaaacgg attgccaggg atttgcatga tacggttagt caagagttat ttgcaacgag
    16621 catgattttg tcaggattat cgtccaatct atccactctt ccgcaggaaa ctttgcagga
    16681 acagctgatg ctcgtgaaag atatgattga gtctgcccaa agagacctac gcatcctatt
    16741 attacatcta cgcccaagtg aacttgaaag taaaaccttg gttgaaggat ttgagctgat
    16801 tttgcgtgaa gttagcgaca aaagtaatat tatcgttcat ttccaacatg aagtagagga
    16861 gttaccgaaa ctaattgaag aacatctctt ccgcattgcg caagaaatta tcagtaatac
    16921 cttgcgacat gccaaagcca agcatttgga tgtttacctc ttgcagaagg aaacagaact
    16981 tcagttgaaa atgacagacg atgggatcgg cttccaacaa ggtgcagatg atgaattaag
    17041 ctacggtctt caaaacatac gtgagcgggt tgaagacatg gctggaacga taaaaattcg
    17101 cacagctcca aataagggag tggcgattga tattcgtatc ccactattga aaggaaaaga
    17161 agatgaatac gattcgagtg atgctggttg acgaccatga gatggttcgt ctaggattga
    17221 aaagttactt aaatttacag ccagatgttg aagtagttgc agaagctagt gatggcgagg
    17281 aaggtttggc taaagcatta gaggttaaac ccgatgttat agtgatggac ttggttatgc
    17341 ccaagatgac tggcgtagaa gcaaccctgg ccttgctgaa ggaatggccg caagcgcaga
    17401 ttgtcatcct gacctcctac ctagataatg aaaaaatcta tcctgtgctg gaagcaggag
    17461 ctcgtggtta tatgttgaaa acgtcaagtg ctgacgaaat cttagcagcc atccgcaagg
    17521 tagctcttgg agaatatgct attgagacag aagtagagaa aaaagtagag caccataaac
    17581 gccacccaga tttacatgat gacttgacag ctcgtgaacg cgaaatcttg acgctgttag
    17641 ccaagggata tgataatcaa cgaattgcag atgagtcctt catatcctta aaaactgtta
    17701 agacccatgt ttccaatatc ttatccaaac tagctgttag cgatcgtact caagcagttg
    17761 tttatgcttt ccagcatggt ttggtggcgc aagaggacca atagtggtat aatgaaaatt
    17821 agttaatttt caaccaaagg atagtggaat tatatggatg caaaactcag atataaggca
    17881 aaaaaaataa aaatagtctt ttttgacatt gacgacacgc tacgtgtaaa gaatacaggc
    17941 tacattcctg aatccattca gcaggttttc aactcactga aagaaaaggg aattttgaca
    18001 ggaattgcgt caggacgaac gccttatggt ttggtgccag aaatcaaggc cttaaagcca
    18061 gactttttcg ctatgattaa cggctcctac gtagaagatg ccaaaggtca ggtagtgtac
    18121 catcagccga tgccccaaaa tttagtagaa tctgtattaa attgggctaa agaaattgga
    18181 atcgaatatg gtatgcttgg tagtcaaaaa gggacacttt ctgcacgaac tgaccgcatt
    18241 agtcaagtaa ttgacttgat ttatgaaggt ttggaaacaa acccaacttt ttataaagaa
    18301 aatgatatct atcaattgtt aactttcgag aaagatggtc acgaagtaga acttccagaa
    18361 gagttgcaag cggaattgcg tagtgttcgt tgggatgcta tttcatcgga cattgtgcta
    18421 aaaggctctt ccaaagcaac tggtgttgct aaggttgttg aaaaactagg cctgaaacct
    18481 gaaaatgtcc tagtgttcgg agatggactc aacgatattg agttattcga ttatgcagga
    18541 attagtatcg ctatggggca ttcgcatcca gaactgcaaa agcatgcaga ttatatcaca
    18601 aaaaaagtag aagaagatgg catttttgat gccttggaga aattaggtat ggtagaaaaa
    18661 gaaaaatatt tcccgcaatt agatttggaa aatgttacag gaccagttgc gcatatcaag
    18721 actaaccatg gtaagttaac agtaaaactc tttcctgaaa ttgcacccaa aactgtagca
    18781 aatttcgtag ctctttctaa agatggctat tatgacggaa ttatcttcca tcgtattatc
    18841 aaagacttta tgattcaagg tggtgatcca accggaacag gtatgggtgg tgaatctatt
    18901 tatggtactg cgtttgaaga tgaattttca atggaagctt ttaatctcag aggagctttg
    18961 tcaatggcca atgcaggacc aaatacaaat ggaagccaat tctttatcgt tcaaaaccaa
    19021 aacttcccat acaatgcgaa agaattagaa cgaggcggtt ggcctaaaga agttgcagaa
    19081 gcctatgtca aaaatggcgg gacaccgcat ctagatcaac gccacacagt gtttggtcat
    19141 ctagttgatg aagaatcctt cgtcgtcttg gatgctatcg cagcggttgc aacagattca
    19201 gcagatcgtc cacatgaaga tgttgtaatt gagaccatcg aaatagagga ttaagatgaa
    19261 aatcggagat aaactcaagg ggacggtaac gggcattcag ccgtatggag cctttgtaca
    19321 attagagaat gggacgacgg gcctagtcca tatctcggaa atcaaaacag gttttgttga
    19381 taatatttat gatcatttaa aattggggca agaggttttg gtacaggtag tcgactttga
    19441 tgaatatact gaaaaggcta gtttatcaat ccggaccttg gaagaagaac aacaaaaaat
    19501 tccgcgtcat catcgtttta caaatgaacg gaataaaatt ggtttttccc ctttagcaaa
    19561 acaacttccg aaatggattg aggaagctaa aggctatctc aaagaacaca aagaaaagaa
    19621 ggtataggat gcattcctaa ccttctttct ttttaatcat tgaactcata aagagctgtt
    19681 gacaagtaac gctcaccgtt atcaggcaag attgccaaca ctttttttcc agttcccaac
    19741 tccttagcga cttcgatagc agcgtgaatt gctgcacctg aagaaatacc aactaagaat
    19801 ccttcttttc caccgatagc acgccctgta gctaaggcat catcggattt gacgcggata
    19861 atgccaacat aggcgctagt gtccaaagta tctggaataa aacctgccga aataccttga
    19921 atcttgtgtg gaccaggtgc ttcaccagat aagacagctg attcatcagc ttcgacagca
    19981 tagatagcaa tatctggatt tgctgtcttc aaaacatgcg aaacacctga aacggtacca
    20041 ccagtaccaa cgccagatac aaaagcatct aaaccagttg ttccaaagtc ttccaaaatt
    20101 tcctgtcctg ttgtatcttc gtgaactttt ggattggatg gattagcaaa ctggaaagga
    20161 acccagccat ttttttcttc agcaatctct tttgctttgg cgatagcccc cctcatccct
    20221 tcgctaccag gagtcaagac aagttcagct ccataagctt ggataatctt acgacgctca
    20281 acactcatgg tttcaggcat gacgataatc accttataac cttttgctgc tccaacccaa
    20341 gcaagaccga taccagtgtt accacttgtt ggctcaacaa tagtatctcc aggtttgatt
    20401 gtaccagcct tctcagcatc ttcaatcata gccaaggcga tccggtcttt tacagaagat
    20461 cctgggttaa aggcctctaa tttcacatag acctccgctg ccccctctgg aacgatatta
    20521 ttgagtttaa taacaggtgt ttttccaact aattgagtaa tgttttgata aatagccata
    20581 tggcacctcc aaataatgtt attatacatt atatagtaga aagtcaaaaa aggataatat
    20641 aaaaaaacta tctcgccgat agcttttttt aatagacagg tacctcaacg attcgagagt
    20701 tagctttttc cgcggatacc tttccgtggt aaaagtcagt gagacttgct aaggtttgtt
    20761 caaggaattc tttatctaca aaaatcatgg ttgaaacttc agtagtaaac tgggtatcaa
    20821 attcttccag accttgctcc gttcgccaat tggcaaactc ttggtattgg gcataggaca
    20881 tgctaatgga aatcccttcc tgctccttga cttccacaac cccgatttcc ttgactgcat
    20941 tagccacggc tccagcgtaa gcacgaataa gtccgcctgc cccgagtttg atacctccaa
    21001 aatagcgggt aaccaccgtt gcgacattgg tcagttcgtg attttctaaa accgtcagca
    21061 ttggcacacc agcagtacca gacggctccc catcatctga ggaacgcttg atttccatat
    21121 tttctccaag gacaaaagca gagcagttat gagtagcctt gtaatgttct ttcttgattt
    21181 tgttgataaa gtcgcgagct tcctcctcgc tggtcactcg tttcataaag cagataaatc
    21241 gtgacttttt aatttcttcc tcaacaatac catcttctct aattgtttta aattctttca
    21301 taaccaaatt gtactaattt ttttaaaaac tgacaagaaa ttccgaataa ataagcgatg
    21361 aaagaattag aaaattatta tggaagatta tttaccaaat accaattgac agcaaaagaa
    21421 agagaaatag cagaaaaagt gccaagtatt acaaaaaaga ataactgctt tcgctgtgga
    21481 acaacttttg aagaagaaaa caaattgcca aacgatgctt attactgtcg agcctgcttg
    21541 cttctaggca gagtacggtc agacgaaaaa ctctatcatt ttcctcagaa agattttcca
    21601 atcactaagt gtttaaagtg gaaaggtcaa ctaactgatt ggcaacaaag aatttcagat
    21661 ggactagttg caaacgtgaa aaataatcgt gcgacattgg ttcatgcagt aacaggagca
    21721 ggtaagacag aaatgatcta ccacaccgtt gcctcagtga ttgataaagg cggagcggtt
    21781 tgcctagcca gtcctcgaat tgatgtttgt atcgaactct ataaacgtct gcaaaatgac
    21841 ttttcagttc caattagttt actgcatgga gagtctgaac cctatttccg aaccccatta
    21901 gttgtagcaa ccacacatca gttattaaaa ttttatcagg cctttgattt ggttttgatt
    21961 gatgaagtag acgcctttcc ctatgcagat aatcccatgc tctatcaagc agcagataat
    22021 gcggtcaagg aagacggagt tcaagttttt ctgacggcga cttcaacaga tgaattggat
    22081 aaaaaagtca gaacgggcaa attaagccgt cttagtttgc caaggcgctt tcatggcaat
    22141 ccgcttgttg tcccgcaaaa agtctggttt agtaaattcg atgataccct aaagaaaaat
    22201 agactagttc caaagttgaa aaaagcgatt gaagaacaga gaacgtcggg ctttccctta
    22261 ctcatttttg tcccagaaat ctccaaaggt caagaattta ccaagataat gaaaaaaaca
    22321 ttcccagaag aaacaattgg ctttgtatcc agtcaaacag aaaatcgcct tgaaatagtt
    22381 gaagggtttc gcaagagaga aatcacagtc ttaatctcga ctactattct tgaacgtggg
    22441 gtgaccttcc catgtgtaga cgtctttgtt gttcaagcca atcattacct ctacacctca
    22501 tccagtctag tgcagattgc aggtcgggtt ggtaggagta tggaacgtcc gactggttta
    22561 ctccagtttt atcatgaggg aagtacagga gccattgaaa aggcaatcgc tgaaattaaa
    22621 cagatgaaca aggaggctgg ttatgtctaa ttgtctattg tgcgcccaag ctatgaaaaa
    22681 taaaacaaga ttttcagatc tcatcttctt tagtaaagaa aaatcgggta tatgtgaaga
    22741 atgtttttcg acttttgagg aaatagcaga gcaacactgt ccacattgtt ataaaaatgg
    22801 agaatcggaa agttgcaagg attgtcagta ctggcagaat caagggaaac cagttgttca
    22861 tacagctttg taccgatata atcaagcgat ggcacattat tttagtcgct acaaatttca
    22921 aggagactat gttttaagaa atatttttgc taaaaagctt agaatagcgt taagccaatt
    22981 tcctgactac acaattgttc ccataccaat tagtcaaaaa cgactattag aacgcggttt
    23041 taatcaagtg gaaggacttt tgagtgctac aaatattccc tatcagtccc ttcttggaaa
    23101 gtatgaaagc caaaaacaat catctaaaaa tcgtgcagag agactagaag caaaacagat
    23161 gttctatcta ttagatgaaa aagaagtgcc agaaaaaata ttattattcg acgatatata
    23221 tacaacagga gccacaatcc aacttgctgt agaacttttc atgaaaattg gtaggaaaga
    23281 aatcaaaaca ttttcactaa cacgatgaga aaacggttgc aatattctta taatgtggta
    23341 taataatagt gaagaaaggc gaaagccaag aaagaggtac taaatatgat taaattcagt
    23401 attcgtggag aaaaccttga agttacagat gcacttcgca cctatgtaga agagaaagtg
    23461 gctaagattg agaaatattt caatgaagaa caagagttga atgctaaagt aaatctaaaa
    23521 gtttaccgtg acaagcgcgc aaaagtagaa gtgacaattc cagttggagc agttacactt
    23581 cgcgcagaag atatttcaca agaaatgtat ggctctatcg atcttgtagt agataagatt
    23641 gaacgtcaaa ttcgtcgtaa caaaaccaag attgaacgaa aacatcgtca aaaagtggca
    23701 actggtcaag tctttacaga tgaacttgtt gagcaaacag gcgaggaagt aaaagtggtt
    23761 cgtactaagc aagtagactt gaaaccaatg gatatggaag aagcagtcct ccaattggag
    23821 ttgctcggac atgatttctt tatctataca gatgctaatg acggcacaac aaatgtattg
    23881 tatagacgcg aagatggaga tttgggtctt ctagaggtac gtcaataaag ataataaaac
    23941 agttgca
//
LOCUS       DASFQD010000020        23865 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.020, whole genome shotgun sequence.
ACCESSION   DASFQD010000020 DASFQD010000000
VERSION     DASFQD010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 23865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23865
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.020"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..2694
                     /locus_tag="U1021_000628"
     CDS             <1..2694
                     /locus_tag="U1021_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEM4711200.1"
                     /translation="ENKQLKLVYPKPATSFNAKAVKRYEQNRFTVMEEVVYKDQERVD
                     LVIFLNGLALFAIELKLNSSGQSVDDAICQLKKRDSKNRLFKFNAGVLASFAVDTLEV
                     YMTTEIKGQDTYFLPFNMGNGEGVNQGAGNPHNESSPDTAYFWKEVLAKDSILQLIER
                     FIFLKVDKDNKNKKTLIFPRYQQRRAVNRVLEDMKVNHTDSNYLIQHSAGSGKTNTIA
                     WLAHSLVSLHDHEDRNVVDAVLIVTDRIVVDRQLQDAVQAIQHQPGVIKVMDDKATSS
                     DLADALAGNTKIIATTIHKFAQINKSDWMTAGPTAQKRFAILIDEAHSSTTGSYMSAV
                     SQVLTETDVEDGTIDEVQEVSVADAIEQEIARTGKQDNISIIAFTATPKATTLQLFGK
                     TLPDGSKGPFDVYSMKQAIQEGFILDVLNNYTTYKTYYKLNKAVEEDPQFKTGLAKRK
                     IAKFIELSDENIDQKVEIIMDHFISHDIMAELGGQGKAMIVTSGREAAVKYQKSFKRY
                     FKEHHITSIGALVAFSGKVSMEDQDYTETLMNGIAEDKLKERFDTDDYQVLIVANKYQ
                     TGFDQPKLVAMYVDKKLRDVAAVQTLSRLNRTVGGYNKKTFVLDFKNTYEDINKAFAP
                     YYKETILSETITPSDVFDLVRKIDEYGILDSDVIHEFNQFLYQERRSSRDKQKMTALL
                     NKGCSRVREFDAKEQLEIKKVFRGFLRMYTFLIQATAYQNEVLHERYNYLQELVKMID
                     VRLGGTDFTIADKIVVDYMKHKQTGVHTVADLEGEYTLSLNKPKIGSIDEEQEKRLSE
                     IIDEINEQLDLTIDPQIGVSGAVSIRELMKKNEKLKQSAKVNSREDFEFSFEDEIDNA
                     LTEGYMQNQDFFGVLLNNDAFKKRIAKLFIDDVYRSLKDDE"
     gene            complement(2935..5280)
                     /gene="pflB"
                     /locus_tag="U1021_000629"
     CDS             complement(2935..5280)
                     /gene="pflB"
                     /locus_tag="U1021_000629"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HEM4711201.1"
                     /translation="MSTKVKTKNVAEDIFAQAWEGFKGTDWQDKASVTRFVQANYTPY
                     DGDESFLAGPTERSLHIKKIIEETKAGYEDTRFPMDVDRATSIADIPAGFIDKENELI
                     FGIQNDELFKLNFMPRGGIRMAETTLIENGYTPDPLLHEIYTKHATTVNDGIFRAYTA
                     DIRRSRHSHHVSGLPDAYSRGRIIGMYARLALYGADYLMEEKVADWNAITEIDEESIR
                     LREEINMQYQALQQVVRLGDHYGVDVRKPAMNTKEAIQWTNIAFMAVCRVINGAATSL
                     GRVPIVLDIYAERDLARGTFTESEIQEFVDDFVLKLRTVKFARTKAFDEIYSGDPTFL
                     TTSMAGMGNDGRHRVTKMDYRFLNTLDNIGNSPEPNLTVLWSDQLPYSFRRYCMAMSH
                     KHSSIQYEGVTTMAKDGYGEMSCISCCVSPLDPESEDQRHNIQYFGARVNVLKALLSS
                     WNNGYDDVHKDYKVFDGVEPNTSEIFDYDQVIANFEKALDWLTDTYVDAMNIIHYMTD
                     KYNYEAVQMAFLPTHLRANMGFGICGFANTVDSLSAIKYAQVKPIRDEDGFIYDYEVT
                     GDFPRYGEDDDRVDDIAKWLMEAFFSRLNKHKLYKNAEATVSILTITSNVAYSKQTAN
                     SPVHRGVFLNEDGSVNTSKVEFFPPGANPTSKSRGGWLQNLNTLSKLNFKHANDGISL
                     TTQVSPKALGKTFDEQVNNLVTILDGYFEQGGQHVNLNVMDLNDVYDKIMAGEDVIVR
                     ISGYCVNTKYLTKEQKTELTQRVFHEVLSMDDHAAEVSGQA"
     gene            5595..6662
                     /gene="dinB"
                     /locus_tag="U1021_000630"
     CDS             5595..6662
                     /gene="dinB"
                     /locus_tag="U1021_000630"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEM4711202.1"
                     /translation="MLIFPLINDLSRKIIHVDMDAFFAAIEVRDNPALKGKPVIIGAD
                     PRLSGGRGVVSTCNYEARAFGIHSAMSSKEAYECCPQAIFISGNYEKYQEVGRQVREI
                     FHRYTDLVEPMSIDEAYLDVTENKLGISSAVKIAKLIQYDIWNELHLTASAGVSYNKF
                     LAKIASDMEKPYGLTLILPEDAVGILASLPVEKFHGVGKKTVERLHEMGVYTGQDLLD
                     VPEMVLIDRFGRFGFDLYRKARGISNSPVKVDRVRKSIGKERTYRKLLYREEDVLKEL
                     ISLCQRVAASLKRNGKKGRTIVLKVRYGDFSTLTKRHSLEVYTDQTETIEKEVRQLIE
                     EIGKIEKGIRLLGVTVTNFQT"
     gene            6705..7124
                     /locus_tag="U1021_000631"
     CDS             6705..7124
                     /locus_tag="U1021_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEM4711203.1"
                     /translation="MQISSRFTTASHILVLLALEGEKEKQTSTSIAGSVGVNPVIIRN
                     ILSQLKEAGLVEVARGVGGARLAQGPDQITLLHVYQAVELFGEKGQLFAFHEQPNPSC
                     QVGRNIHPLLDSRLENAQSALENELAKTRLADLLAEL"
     gene            7363..7989
                     /locus_tag="U1021_000632"
     CDS             7363..7989
                     /locus_tag="U1021_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEM4711204.1"
                     /translation="MKIAIIAANGQAGQTIAKEAVERGHQVTAIVRSENKSVAQEVIQ
                     KDAFALTKEDLAGFDVVVNAFGAWTPETLPDHARLAEHLATILAGSPTRLLVVGGAGS
                     LYLDESQTAMLKDTPDFPAEYLPIAEAMGTGLDLYRQATAVNWTYISPAADFDAEGQK
                     SGAYTLAGEVFQVNAQGESYISYADYAVALVDIAEKGGYQQERISVLA"
     gene            8091..9011
                     /locus_tag="U1021_000633"
                     /pseudo
     CDS             8091..9011
                     /locus_tag="U1021_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922588.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-6-phosphate kinase"
     gene            9059..9697
                     /locus_tag="U1021_000634"
     CDS             9059..9697
                     /locus_tag="U1021_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HEM4711205.1"
                     /translation="MRWGIVVEQLTVLYQNLKRRYGEFHWWNDENPIKDLVSMILIQQ
                     TTEANAKRALEQLEGRLTIHSLLEMPVEDLQECIRPAGFFKQKSLYIRSVVEWANQFD
                     GDFSRLDRVETAVLRKELLSLKGVGNETADVILLYLCRRSIFVADQYALRLFNRLGLS
                     QSQDYLSLRQEFTEQIKDWSVKDAQELHALIDEHGKQFRLTKGQLDESWLMI"
     gene            complement(9980..11179)
                     /locus_tag="U1021_000635"
     CDS             complement(9980..11179)
                     /locus_tag="U1021_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM4711206.1"
                     /translation="MGKKEETIRNISGNILKTLFRHQKSSRTRISKSLKITPATITNM
                     ISYLVAENKVIETGDEVRDYIGSGRSRRLITVNSQYRHYIGIEINANGIYLAVTDTIG
                     NLIKNSNIKITEYDSKKINEIIIQLVTETLEKFSYLEFGALGIAVPGHFDSKSGHIIS
                     NNVKWIYFDLAVIKESISIPIFLENNINCMAIGAYLFHPESSPEQFLFIHIGPGLFCS
                     FFDSEHILQNKNFYIGEIGHTVVDLNGPSCECGKRGCLQTYISDTWLINNARFLFENV
                     QGSIIKTLVEKPEDITLDVVYNAYRLGDGFIIEKIESGIDFLATSIANTLVIYDSKKI
                     FINSQLLNYPGFSEKVNNLVDNQLQFIPSKNNLDIKFLSFNIFRGAIGAASLAVYNHF
                     ILENNSN"
     gene            11371..12699
                     /locus_tag="U1021_000636"
     CDS             11371..12699
                     /locus_tag="U1021_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM4711207.1"
                     /translation="MNRLMHFLEHKLAPFGTKVGNQRHLKAVRDGFMMAMPLVLVGSF
                     FLLLISWPDQASGGFSVVGFLEQIGLLGILNRLNQSTMAIISLIATFGIAYRLSESYE
                     TDGPSAGVIALSSFILLAPRFSTIVFNESGEQINQVFAGAIPFGSLNASALFVAIAIG
                     LVSAEIYRFFIQRGITIKMPKNVPDVVGKSFAALLPALTTLIFWACVFQGLEAAGVEG
                     GLGAVLGLIVGKPLGLIAGSLGGMVLVVLVNSLFWFTGVNGGQVLNAFVDPVWLQFTE
                     ANQVAAAAGEKLPHIITLPFKDLFVFMGGGGATVGLAICLLVFSKSRTFKSLGRISFI
                     PSLFNINTAILFSFPTVLNPIMMIPFILTPTVNAIITYFAMATGLVPMTTGVVLPWTM
                     PPILGGFLATGGSVQGAILQIILIGVSFIIYYPFFKVADNKNLELEASGE"
     gene            12704..14590
                     /locus_tag="U1021_000637"
     CDS             12704..14590
                     /locus_tag="U1021_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000236922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4838 domain-containing protein"
                     /protein_id="HEM4711208.1"
                     /translation="MKLTIFDKVQNKTSQFAIDELTYYLKAIFDFELGRTTVEEDANI
                     LLSKEYFDNNDTIGIEMKNGNAILSGNSDISILIAVYRLLSEFGAVFTRPGRKHELIP
                     SLSISDWNEKELSIHETASYKHRGVCIEGADSYQNIKEFLDWLPKINMNSFFIQFENP
                     YSFLKRWYEHEFNPYADKEDFNTEIAQQMSDLLDEELSKRGLIHHRVGHGWTGEVLGY
                     SSKYGWESGLILPEEKKPLVAELNGKRELFNTAPILTSLCFSNPDVGERMCELIVNYA
                     KERKDVDYLHVWLSDARNNICECEKCKEEIPSDQYVRILNQLDRKLSEEGLNTKICFL
                     LYHELLFAPKHEVLENPERFTMMFAPITRTFEMSYADVDYENNVPLPNEYTRNNIVLP
                     NSLEENLSYLFSWQKVFNGDSFVYDYPLGRAHYGDLGYMKISKVIFRDVVYLKKLGLN
                     GYISCQELRAGFPHNFPNFVMGQMLWNRNLEYDELKALYFSSLYGSEWKSVVTYLEKL
                     SDYSSCDYFNSIGDRQNAELSMKYNISSKLAFNFINILEENVAKNYGIKRDAWRQLGY
                     HREYVIKLANALYLMASGDYLDGQIQWRDFLDYIRNHESDFQPYLDVYRIIEVAKNYA
                     GFKL"
     gene            14710..17649
                     /locus_tag="U1021_000638"
     CDS             14710..17649
                     /locus_tag="U1021_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HEM4711209.1"
                     /translation="MNKKIFLNSAIILLSVTCFTGSVDALDNSRVIAIPSEIVNSENA
                     YNITLKAKTDGVESDLGGSIVSENGVLSGSNGTKINLKITTNPGYRFVGYQSFLENGN
                     STDGLLPIENDSFEISDKTGNVTVIAIFESVPVDESIYFSDDFSVENINNYVISENLV
                     GKIGISDGKMNLHAPGISSIKPILTKPIEDNATSGYEIGFTLQQIGEVKPWNTFRIVF
                     KEDHDGFIYALEFSGQAAFLKKLSSIDAPLQSGEKYAETSHILGSEEHKVRLVVKGNS
                     VTVSDNGIPLLSYNSPNNWNDAQASIVFSPVSNRSVSLDDIIVRRTQTLRPFRVVSRL
                     DGQEVSGVLPGSIKGTTSQVFVGDSLNLEVIEKSGYQFIGFKDSAGNFLDLTTFVVPN
                     EESELVLYADFESVDVVIREPKTFYIDSLGGNDSNNGETENSAWKSFEQLRKKSFVAG
                     DRILIKRGSRFVGESAFLTFKGSGSQNTPILISSYGEGELPLLEGQGKIENVIKLYNQ
                     EFITIENLEITNLDPNFSTSFELNSNNNRTKSLRGLHVVAEDYGVVHDINIRNLYIHD
                     INGNLSSKWNGGIFFDVYGTTIPTKYDGILIENNYLERVDRSGIKLVGSTWANQNLKN
                     NKNVPLNWYPSTNVVVRGNRIEKAGGDSLTVRDTDGALIEYNISADARYQNTGYNAGI
                     WPFQASNTVIQYNESFRTHGVQDGQGLDLDHISNNSVMQYNYSHDNEGGFMLIMNWYE
                     QTSPTVRYNISQNDKDKIFELARGGAQGTAIYNNTIYSDSKLTGRAGVIDMPSTSGGT
                     GVKDIFLFNNIFYFVDGEKMLVEASDAGKYKDNIHFYNNAYVGVEVPNDPRAITEGIE
                     LNGIGTGPIDNKSMIANTGKYLTGQLDGYKIPFNSVLANSGVSKEDAITYFYEKLGIQ
                     QQIDFIENGSLNMSPIEAFSLARQTNSIDAIARSYPKIDGVNYDIDFFGESILTDNLS
                     IGAAQVK"
     gene            17864..18625
                     /locus_tag="U1021_000639"
     CDS             17864..18625
                     /locus_tag="U1021_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711210.1"
                     /translation="MRKKLIATIAFCVVCLFLYSFVPQSFGTPTIFQTPYKTSVKSEF
                     EALFHKHGIDVSENDFWATSLNGRTPQDILNEKAKLLYIKFNLLEKEARKYGFNKEKL
                     DFKKVDWKLVSDRYIELKQIVIDEKIKTVNHDQIKQYYLENNLNFARQDLINGKISTW
                     NDGLIISTESVEINEETVRLVTERFPDLELQLENIEVGQQFSWKQNGIYYTFSCLSRE
                     DKGIIPLSEITDAVAMQCAEELVDNWLNKETDSLK"
     gene            18847..19605
                     /locus_tag="U1021_000640"
     CDS             18847..19605
                     /locus_tag="U1021_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4711211.1"
                     /translation="MKSNKEQKYFWLTFSLIVALMIWWFLSNYDRTSRSFPNIILVWN
                     ALLIMIDKGFIFEDIFSSLTSVFFGFTSGFLLSVPNALFMSWYSPYRNIVYPWIQYIR
                     NIPPLAYVPLVVISAGVGLLPQVIVIAIATFLTMTVTIYQGIINIDPNLIKAARILGA
                     SDFEIFKRILVPASIPFIMTAVRLGTSISLTTIIAAESTGATSGMGMRIRSLNNSFDS
                     SGMLLYIILIGVIGLLLNKLVDLIERKLTGWQQK"
     gene            19590..20381
                     /locus_tag="U1021_000641"
     CDS             19590..20381
                     /locus_tag="U1021_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711212.1"
                     /translation="MATEVKKIKVKIEEVSKSFQSIHGEVVALNQINLEIFENEIVTV
                     VGPSGCGKSTLLNLVAGLEPVTSGKIYCDDNEIVGVGVERGVVFQQYALFPWMSVQQN
                     VMFGPEMQGKSKLEASEIANKYIKMVGLQEFSNHYPKELSGGMKQRVAIARAYAVNPT
                     ILLMDEPFGALDAQTRIQLQDELIEMLEHERKTCLFITHDIEEAILLGNRVIIMSSRP
                     GEIKEIVNVDLPFPRSQSIKFENDFIDIKNHIWSLVYKDFLNIKK"
     gene            20412..21440
                     /locus_tag="U1021_000642"
     CDS             20412..21440
                     /locus_tag="U1021_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4711213.1"
                     /translation="MIKFVKNKYFNWIISLITLIILVACSSNQTLIRDNSANIDKIRI
                     AYMPNFASLHDIITGINSGIFKEEGLEVELIEFADGPTIIASLESGSIDIGNIGPGAH
                     KLAIEGRAEVVAFSQLGNADELIARSDRGIDSIKDLRGKKIGTASGTSAETILKLALL
                     DANLSEKDVEIIDMDASAIVTAMLSGSIDVAATWSPNTTLIKRELKEKVVVLADNSRY
                     RDQSPAIASYVTFPGYSEKNNEKISKFLKGLYRAMDYRAEHMKEVSKWVATQIGSDIT
                     AVQDQLQDGEWLTSRQMIQLINTGILQQYYEKQQKNLIVSGIVDISRNINEYVLIDQM
                     SSILKEIK"
     gene            21534..22343
                     /locus_tag="U1021_000643"
     CDS             21534..22343
                     /locus_tag="U1021_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate isomerase"
                     /protein_id="HEM4711214.1"
                     /translation="MIEYYNFNKSELEKHSRIPLIVKKNNEEIFISLALEMVELIKEN
                     NEKNEKTVIICPVGPVGQYPHFVRLVNQFKIDLSNVWFINMDEYLLEDLHWIDVVHPL
                     SFRGFMQKNVYSQIHPTLIMSEEQRIFPDPLDIDSISNKIKELGKIDLCIGGIGLNGH
                     IAFNEPDSTLTVQEFLKLGSRVLPISVETKVMNGLTVLKGAVEEVPNYCVTIGMSEIF
                     QAKKIRLAVFRDWHHAVIRKTVCSKPDTGFPSTLMQIHTNCSIYLNESLAN"
     gene            22504..22683
                     /locus_tag="U1021_000644"
     CDS             22504..22683
                     /locus_tag="U1021_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014635836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HEM4711215.1"
                     /translation="MKQASYPIQGVTCASCAMTVEKALNKLDGIQNASVNLATEKTNI
                     QYDPAHLSLSDIDSC"
     gene            22832..23579
                     /locus_tag="U1021_000645"
                     /pseudo
     CDS             22832..23579
                     /locus_tag="U1021_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636211.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
     gene            23636..>23865
                     /locus_tag="U1021_000646"
     CDS             23636..>23865
                     /locus_tag="U1021_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEM4711216.1"
                     /translation="MFSLSITISVLVIACPCALGLATPTAIMVGTGKGAENGLLFKSG
                     QTIKTLQGVNTIVFDKTGTITEGKPQVTDIHL"
BASE COUNT         7558 a         3835 c         4997 g         7475 t
ORIGIN      
        1 gaaaataaac aattgaaact ggtctatccc aagcctgcca cctcctttaa tgccaaggca
       61 gtcaagcggt atgagcaaaa tcgttttaca gttatggaag aggttgtcta caaggatcag
      121 gaacgtgtag acttggttat ctttctaaat ggcctagctt tatttgcgat tgagttgaag
      181 cttaattcca gtggtcaatc ggtagatgat gctatttgtc agttgaaaaa gcgagatagc
      241 aaaaatcgct tgtttaagtt taatgcgggc gttttggctt ctttcgcggt agatacctta
      301 gaagtctaca tgacgaccga aatcaagggg caagatacct atttccttcc cttcaatatg
      361 ggaaatggtg aaggggttaa tcagggggct ggaaatccgc acaatgaatc tagtccagac
      421 acagcctatt tttggaagga agtgctggct aaagacagta tcctccagtt gattgaacgc
      481 tttatctttt tgaaggttga taaggataat aaaaacaaga aaacgctgat tttccctcgt
      541 taccagcaaa gacgggctgt aaaccgtgtc ctagaggata tgaaggtcaa tcacactgat
      601 agtaattacc tgattcaaca ctcggcaggg tctggcaaga ccaatacgat tgcttggttg
      661 gcgcatagtt tggtaagtct gcatgaccac gaagaccgaa atgttgtgga tgcggtcttg
      721 attgtgacag acaggattgt tgtggacagg cagctacagg atgctgttca ggctatccag
      781 catcagcctg gggttatcaa ggtgatggat gacaaggcga cttccagtga cttggcggat
      841 gccttggctg gaaataccaa gattatcgca acaaccattc ataaatttgc ccaaatcaat
      901 aagtcagatt ggatgacagc tggtccaact gcccagaaaa gatttgccat tctgattgat
      961 gaagcccaca gttcgacgac gggctcctat atgagtgctg tcagtcaagt tttgacagaa
     1021 acagatgtgg aggacgggac gattgatgag gtgcaggagg tttcagtggc ggacgccatt
     1081 gaacaagaaa ttgctcggac aggaaagcaa gacaacattt cgatcatcgc ttttacagct
     1141 acgcctaaag cgacaaccct ccagttgttt ggaaaaacct taccagatgg ttcaaaaggt
     1201 ccttttgatg tctactctat gaaacaggct atccaggaag gctttattct ggatgtcttg
     1261 aataactata ctacttacaa gacttattac aaattgaaca aggctgttga ggaggatcct
     1321 cagtttaaga caggtcttgc caagagaaag attgccaagt ttatcgagtt atcggatgaa
     1381 aatattgacc agaaagttga aatcatcatg gaccatttca tcagtcatga cattatggct
     1441 gagttgggcg gtcaaggtaa agctatgatt gttacatcgg gtcgtgaagc agcagtcaag
     1501 tatcaaaagt cctttaaacg ttatttcaaa gagcatcata tcaccagtat tggagcttta
     1561 gttgcttttt caggtaaggt gagtatggag gatcaggatt atactgagac tctgatgaac
     1621 ggaattgcgg aagacaagct taaagagaga tttgatacag atgattatca ggtcttgatt
     1681 gtggccaata aataccagac aggttttgac caaccgaaat tggtggctat gtatgtagat
     1741 aaaaagttgc gagatgtagc agctgtacaa actctatctc gcctcaatcg tacggtggga
     1801 ggctacaata agaaaacttt tgtactagac tttaaaaata cctatgagga tataaacaag
     1861 gcttttgctc cttactataa ggaaacgatt ttatcagaaa ctattacgcc aagtgatgta
     1921 tttgacttgg tgcgtaagat agacgaatat ggtattcttg acagtgatgt tatccatgag
     1981 tttaatcaat tcctttatca agagagacgt tctagtcggg ataagcagaa gatgacagcg
     2041 ttgttgaata aaggttgcag tcgtgttcgg gagtttgatg cgaaggagca gttggaaatc
     2101 aaaaaagttt tccgaggttt tcttcgaatg tatactttcc tgattcaagc tactgcctat
     2161 caaaatgagg ttctgcatga gcgttataat tatctacaag aattggtgaa gatgattgat
     2221 gttcggcttg gtgggacgga ttttaccatt gcggataaga ttgtggttga ctacatgaag
     2281 cacaagcaaa caggtgtcca taccgtagcg gacttggaag gagaatatac tctttcgctt
     2341 aataaaccta aaatcggatc tattgatgaa gaacaggaaa aacgtctttc agagattatt
     2401 gatgaaatca atgagcaact tgatttgacg attgatcctc aaatcggtgt tagcggtgca
     2461 gtttctattc gtgaactcat gaagaaaaat gagaaactca agcagtctgc taaggtaaat
     2521 tctcgtgaag atttcgagtt ttcttttgaa gatgagattg acaatgcttt aactgagggt
     2581 tatatgcaaa atcaagattt ctttggtgtc ttgctcaata atgatgcttt caagaaacga
     2641 attgccaagc tttttataga cgatgtttat agaagtttga aagatgatga atagggagtg
     2701 aaaaagaatt cgataagata aaagagtttc tcagcaaatt cttgtttcaa gttgttgagt
     2761 tgtaacagtc tatttccaga catcaattaa tgtggagact ggacttgagc ttagtctctt
     2821 gtgggatgct gctagtatcc ttcagttctc tccccatcct tccacaatgt gtgggaggat
     2881 tttttcgaca tagtaaaagg acctgcatgt gcaagtcctt ttgtgtttgc ttgattaagc
     2941 ttgacctgaa acttcagcag cgtggtcatc cattgaaaga acttcgtgga agacacgttg
     3001 agtcaattca gttttttgct ctttagtgag gtatttagtg tttacgcagt atccagagat
     3061 acgaacgata acatcttcac ctgccataat cttgtcataa acatcgttca agtccataac
     3121 gttcaagttg acgtgttgac caccttgctc gaagtatccg tcaaggattg tcaccaagtt
     3181 gttcacttgc tcatcgaagg tcttaccaag agcttttggt gaaacctgag ttgtcaatga
     3241 gataccgtcg ttggcatgtt tgaagttgag tttagaaaga gtgttcaagt tttgcaacca
     3301 accaccacga gatttagaag ttgggttggc acctggtggg aagaattcta ctttagaagt
     3361 gttaacagaa ccatcttcgt tgaggaatac accgcggtga actggtgagt tagctgtttg
     3421 tttagagtaa gcaacgtttg aagtgattgt caagatagac acagttgcct cagcattctt
     3481 gtacaatttg tgcttgttca agcgagagaa gaatgcttcc atgagccatt tcgcaatgtc
     3541 atctacacgg tcgtcatcct caccataacg tgggaagtcg ccagttactt cgtaatcgta
     3601 gatgaagcca tcttcgtcac ggattggctt cacttgtgcg tacttgatag cagacaagga
     3661 gtcaacagta tttgcgaagc cacagatacc gaagcccatg tttgcacgaa ggtgagttgg
     3721 caagaaggcc atttgaactg cttcatagtt gtacttgtca gtcatgtagt ggatgatgtt
     3781 catcgcgtct acatatgtat cagtcaacca gtcgagggct ttttcaaagt tggcaataac
     3841 ttgatcgtag tcaaagattt cagaagtatt tggttcaaca ccatcgaaca ctttgtaatc
     3901 tttgtgaaca tcgtcgtagc cgttgttcca gcttgaaaga agagctttaa gaacgttaac
     3961 acgagcaccg aagtactgaa tgttgtggcg ttggtcttcg ctttctggat caagtggaga
     4021 tacacagcaa gagatacatg acatttcgcc ataaccatct ttcgccattg ttgtcacacc
     4081 ttcgtattgg atagaagagt gtttgtggct cattgccata cagtagcgac ggaatgaata
     4141 tggaagttgg tctgaccaaa gaactgttaa gtttggttct ggagagttac cgatgttgtc
     4201 aagtgtgttc aagaaacggt agtccatctt agtaacacgg tgacgaccat cgttacccat
     4261 acctgccata gatgttgtca agaatgttgg gtcaccagag tagatttcgt cgaaggcttt
     4321 tgtacgagcg aatttcactg tacgaagttt caatacgaag tcatcaacaa attcttggat
     4381 ttcagattca gtaaatgtac cacgagctaa gtcacgctct gcatagatgt caagaacgat
     4441 cggcacacga ccaagagaag ttgctgcacc gttgataaca cgacatacag ccatgaaagc
     4501 aatgtttgtc cattggatag cttctttagt gttcattgca ggtttgcgaa catcaacacc
     4561 atagtgatca cctaagcgta caacttgttg caatgcttgg tactgcatgt tgatttcttc
     4621 gcgaagacgg attgattctt cgtcgatttc agtaatcgca ttccagtcag ctactttttc
     4681 ttccatcaag tagtctgcac cgtaaagtgc caaacgagcg tacataccga tgatacgacc
     4741 acgtgagtat gcatctggaa gaccagaaac gtggtgtgag tggcgagaac ggcggatgtc
     4801 agctgtgtag gcacggaaga taccgtcatt tacagttgta gcgtgttttg tatagatttc
     4861 atgaaggagt gggtctggag tatagccgtt ttcgataaga gttgtttcag ccatacgaat
     4921 accaccacgt ggcatgaaat tgagtttgaa gagctcatcg ttttggatac cgaagatgag
     4981 ttcgttctct ttatcgatga aacctgctgg aatatcagcg atagaagtag cacgatctac
     5041 gtccattggg aagcgagtgt cttcgtagcc agcttttgtt tcttcgatga tttttttgat
     5101 atgaagtgaa cgctcagttg ggcctgcgag gaagctttca tctccatcgt atggagtgta
     5161 gttggcttga acgaagcgtg ttacacttgc cttatcttgc caatctgtac ctttaaagcc
     5221 ttcccaggct tgggcgaaaa tgtcttcagc aacatttttt gttttaactt ttgttgacat
     5281 gagggttctc cttttatgct tttgggtatc gacttgctat cgataccaac atgtcattat
     5341 tataccattt gaaaacactt tctacaagac aaaaatactt gaaaataaat gaaaaacctt
     5401 tcaaggaata tgaaaaaatt gaaagataga gttggtattt tcaaaataaa tttctgcttg
     5461 tatttgtaat aaggtgataa gctgtcgttt attgtattga taagatggct ggttcaacga
     5521 atctaaaggc tgaaacttcc taagaaatgc ggtataatat agcgagtcaa acttgtaaac
     5581 aggaagaggc agtcatgtta atttttccct taatcaatga tttatctaga aaaattattc
     5641 atgtagatat ggatgctttt tttgctgcca ttgaggtcag ggataatccc gctttgaagg
     5701 gcaaacctgt tatcattggg gctgacccaa gactatctgg cggtagagga gtggtatcta
     5761 cctgtaatta tgaggcgcgt gcctttggga ttcactcggc tatgtcctca aaagaggcct
     5821 atgagtgttg tcctcaggcg attttcattt ctggcaatta tgaaaaatat caggaagttg
     5881 ggcgacaggt tcgagaaatt tttcatcgct atactgattt ggtggagccc atgtctattg
     5941 atgaggctta cttggatgta acagaaaata agttgggcat cagctctgcg gttaagattg
     6001 ccaagcttat ccaatacgat atttggaatg aattgcatct gacagcttcc gcaggcgttt
     6061 cctataataa atttttggca aaaattgcat ctgatatgga aaaaccgtac ggtttgacct
     6121 tgattctacc tgaagatgct gttggtattc tcgcctccct gcctgttgaa aaatttcacg
     6181 gtgtggggaa gaagacggtg gaacgcctgc atgagatggg ggtctacacg gggcaagatt
     6241 tactagatgt accagaaatg gttttgatag atagatttgg ccgttttggc ttcgaccttt
     6301 atcggaaagc gagggggatt tcaaattcgc ccgttaaagt ggaccgtgtt cgtaagtcaa
     6361 ttggaaagga aagaacctat cgcaaacttc tttatcggga ggaggatgtc ctgaaagagc
     6421 taatcagtct ctgccaacgg gtcgcagcca gtttgaagcg aaatggaaaa aaggggcgaa
     6481 caattgtttt aaaggtacgt tatggtgatt tttctacctt gacgaaacgt catagtctag
     6541 aggtgtatac ggaccaaacg gaaacgattg agaaagaggt tcgtcaacta attgaagaaa
     6601 ttgggaagat tgaaaaaggg attcgtttgc tgggtgtgac cgtgactaat tttcaaactt
     6661 gagttctgtt tcagtctatg atagactgaa aaaaaggaga agagatgcaa atttcaagta
     6721 gatttaccac tgccagccat atcttggttc tcttggctct ggaaggagaa aaagaaaaac
     6781 agaccagtac tagcattgca ggcagtgtcg gggttaatcc tgtcattatc cgaaatattt
     6841 tgtcccaact caaggaggct ggtctggtag aagtagcgcg tggtgttggg ggtgctcgct
     6901 tggcacaggg tccagaccag attacacttt tgcatgtcta tcaggctgtg gagttatttg
     6961 gagaaaaagg tcaattattc gcttttcatg agcaaccgaa tccttcctgc caagtaggtc
     7021 gcaatattca tcctctgcta gatagccgtt tggaaaatgc tcagtcggct ttggaaaatg
     7081 aacttgctaa gacaaggctt gctgatctct tggcggaact atagtcgttt tattaggtca
     7141 acgtaaggag aaactttgtt tccctatttc ctacttcaaa cactccactg gactgttgaa
     7201 gtagtctgta gagtgttgcc ctagcactaa aagactagtt agtgaatcat ccttgtgatg
     7261 atttttttaa ttttcaagct gtaacaattg acgttacaac caaaataatt tatacttacg
     7321 ttgtaaacga agttgttaca acgaaacaag tgaggtatca atatgaaaat tgctattatt
     7381 gcagcgaatg gtcaagcagg tcaaactatt gcaaaggaag cagtagaacg tggtcatcag
     7441 gtgacggcta ttgtccgttc tgaaaacaag agcgtagccc aagaagtaat ccagaaggat
     7501 gcttttgctc ttaccaaaga agatttggca ggctttgatg tagtagttaa tgcttttggt
     7561 gcttggacac cagaaacctt gccggatcac gctcgtcttg ctgagcatct agcgaccata
     7621 cttgctggta gtccaactcg tcttttagta gttggtggtg caggcagtct ttatttagac
     7681 gagagccaga cagctatgct gaaagataca ccagatttcc ctgcggaata cctgccaatc
     7741 gctgaggcta tgggtactgg tctagacctc tatcgtcagg cgacagcggt caactggacc
     7801 tatatcagcc cagcagcaga ttttgatgca gaaggtcaaa aatcaggtgc ctacactttg
     7861 gctggcgagg ttttccaagt caatgcccaa ggtgaaagct atattagtta tgccgactat
     7921 gctgtggctt tggttgacat tgcggaaaaa ggtggctacc agcaggaacg aatttccgta
     7981 cttgcataaa aaattaaatg gtctaaaaga tagctccatc gaggaattat ctttttattt
     8041 tttacttgca tatagtataa taatataaat aaaaagaaaa ggagaacccc atgattcact
     8101 tgatttgtcc caatccagcc ctagaccgca cgcttcttgt ggaaaagatt gaaaagaata
     8161 ttcccctgag accgacggaa gtgagggatt atcctggtgg aaaaagtttc aacgtagcct
     8221 atgcacttcg agaaaatgga gtgacagact acactatcca taccatttta ggtgggcaga
     8281 ttggtcgcta tattcaggag cttaatgctg atggtggaaa tgccctgcgc gtggttgaaa
     8341 atagccagaa tactcggaca tgtaatatct atgttgaaac cagtacaggc gatgtagtac
     8401 tattttatga aaaaggtttt gaactaacag aggatttgct caaccaattc actcagcaga
     8461 ttgaaaatag cctgcaagct ggcgacatcc tagtcttttc aggtagtctg atgaagggga
     8521 tgtcggatga ttatattcag cggtttattg aaaaataccc agaagttctg accatagtgg
     8581 acaccagtgg accagcttta cgtgcggctt atcaagctag accggccctt atcaaaatca
     8641 ataatgaaga gctgaaagat atttatccag agctggatga agaaagtcct gaagctattt
     8701 taggtatcct gaaagaagtg actcctcatg agaatatcat cattaccatg ggagacaagg
     8761 ggagtctagc taagattggt cagcgcttct tccgtattta gtctccaaag aaagaaacgc
     8821 gtaatcctat tgccgcaggg gatttctacc tgggcttgct agtcaaagga atcagtcaag
     8881 gtcaagcccc agaaatcttt ttgaaagaag cggcagcctt tgcaacagcc aattgtttga
     8941 attattttcc agaggttgaa gcagagcagt ttgaagcgat tgtagataca atagtactag
     9001 aggaactgta gtattgtatc cctttactca tcgtgctata atggcaagga gaaacaaggt
     9061 gagatggggg atagtagtgg aacagttgac ggttctttac caaaatttaa aacggcgata
     9121 tggtgaattt cactggtgga atgatgaaaa tcctataaag gatttggtat ctatgattct
     9181 tattcagcaa acaacggaag caaatgccaa gcgtgcttta gaacagttgg agggacggtt
     9241 gacaattcat tcgcttttag agatgcctgt ggaggattta caagaatgca ttcgcccagc
     9301 aggattcttc aagcaaaaat cactctacat tcggtcagtg gttgagtggg ccaatcagtt
     9361 cgatggagat ttttctcgcc tagatcgtgt tgagacagca gtacttcgaa aagagctgct
     9421 gagcttgaag ggggttggca atgaaactgc ggatgttatt ttgctctatt tgtgtcgaag
     9481 aagtattttt gtggcggatc aatatgctct tcggctattt aatcgtttag gacttagcca
     9541 gtctcaggat tatttgagtt tgagacagga atttacagag cagataaaag attggtcggt
     9601 aaaagacgct caggagcttc atgcactgat tgatgaacat ggcaagcagt tcaggttaac
     9661 aaaggggcag cttgatgaat catggttgat gatatagtca tactcttcga aaatcaaaat
     9721 cagacgttgt tgacatgatt tgatgaacct cagttctatc tgcatttgcg tcgcctagct
     9781 tgattttgat tttcattgag tatcaattag tgtatttttt attactgaag ggcgaggaag
     9841 tctcatttcc ttatttccga gtttaaacac tccactggac agttgaagta gcctgcatat
     9901 cgttgccttg tactaaaagc aaacgaaacg actataaaag agtaaaacca gcggttcagt
     9961 tggttgctct ttttttatat taattggagt tattttccaa gataaaatga ttatagactg
    10021 ctaaggatgc tgctccaatt gcacctcgaa atatattaaa agataagaat ttaatatcta
    10081 aattattttt acttggaata aattgcaatt gattgtcaac aagattatta actttttctg
    10141 aaaaacctgg ataatttaat aactggctat taatgaaaat tttttttgaa tcataaataa
    10201 ccaatgtatt tgcgattgaa gtggctaaaa aatcaatccc tgattcaatt ttttcaataa
    10261 taaaaccatc tcctagtctg tatgcattgt atacaacatc taatgtaata tcttctggtt
    10321 tttcaaccaa agtttttatg atagaacctt gaacattttc aaataaaaat cttgcattat
    10381 taattaacca agtatcagaa atataagttt gaaggcatcc gcgttttcca cattcacaag
    10441 aaggtccgtt taaatcaact actgtatgac caatctctcc aatataaaag tttttgtttt
    10501 gtaaaatatg ttcgctatca aaaaatgaac agaacaatcc aggtccaata tgaataaata
    10561 aaaactgctc tggcgaactt tcgggatgaa aaagatatgc accaattgcc atgcaattaa
    10621 tattgttctc tagaaaaata ggaattgaaa tactttcttt aattacggca agatcaaaat
    10681 aaatccactt tacattattt gaaataatat gtcctgattt tgaatcaaag tggcctggta
    10741 cagcaatacc gagagctcca aattcaagat aggaaaactt ttctagagtt tcggttacta
    10801 attggattat tatttcattt atttttttgg aatcatattc tgtaattttt atattgctgt
    10861 ttttgattag gtttccaata gtgtctgtga ctgctaaata gattccattg gcattaatct
    10921 ctattccaat ataatgtcta tattgagaat ttactgtaat aagtcgtcta ctacgacctg
    10981 atccaatata atctcgaacc tcatcgccag tctcaataac tttattttca gctacaagat
    11041 aactaatcat attcgtaata gttgccggag taatttttaa agatttagat attcttgttc
    11101 tagagctttt ttgatgtcta aataaagttt ttaatatatt tccagaaata tttctaatgg
    11161 tttcttcttt ctttcccatt ttagtacctc acattggaaa atagtatttt tcaatgtaag
    11221 aataacatat tttttataaa aaatgaagta aaaatactga atgtataaac gaattttgtt
    11281 ttttaattaa aaatataaat aaaaacttga caattaagcg cttacatgat atctttattt
    11341 tacaaaataa aattaatgga ggataagaaa atgaatagat taatgcattt tcttgaacat
    11401 aaacttgctc cttttggaac taaggtagga aatcaacgtc atttgaaagc agttcgtgac
    11461 ggttttatga tggctatgcc tcttgtatta gttggctcgt tcttcctgtt gctaatcagt
    11521 tggccggatc aggcttctgg gggattttca gtagtaggct ttttagagca aattggtttg
    11581 ttgggaattt taaatcggtt aaatcaatca acaatggcga tcatctctct catagctaca
    11641 ttcggtattg catatcgatt atccgaatca tatgagacag atggaccttc tgcaggtgtt
    11701 attgccttat cttcttttat tttacttgca ccaagattct caacaatagt tttcaacgaa
    11761 tctggtgaac aaattaatca agtatttgct ggagcaatac catttggaag tttgaacgca
    11821 agtgcattat ttgttgctat tgctattgga ttagtttcag ctgaaattta tcgcttcttt
    11881 attcaaagag gtattacaat taaaatgcca aaaaatgtcc ctgacgttgt gggtaagtcg
    11941 tttgctgcat tgcttccagc attaacaaca ttgattttct gggcgtgcgt cttccaggga
    12001 ttagaagctg ccggtgttga aggtggactt ggagcggttt taggattaat tgtaggtaaa
    12061 ccactaggac ttattgcagg aagtctaggt ggaatggtgc ttgttgtgct tgtaaattca
    12121 cttttctggt ttactggcgt taatggtgga caagtgttaa atgcttttgt tgatccggtt
    12181 tggttacagt tcacagaagc aaatcaagtt gcagcagctg cgggagaaaa attaccacat
    12241 attattactt tgccattcaa agatttgttc gtatttatgg gcggtggtgg cgctacagta
    12301 ggattagcga tttgcttact tgtctttagt aaaagtcgta catttaagag tttaggacga
    12361 atctccttta ttccttctct ctttaatatt aatactgcta ttctgttcag ttttccaacc
    12421 gttttgaatc ctattatgat gattcctttt attctcacgc caacagtaaa tgcaataatt
    12481 acctatttcg ctatggcaac tggattagtt ccgatgacaa caggggttgt tcttccttgg
    12541 acaatgcctc caattcttgg tgggttcctt gctactggcg gtagtgttca aggagcaatt
    12601 ttacaaatta ttttaatagg agtctcattc attatttatt atccattttt caaagtggcc
    12661 gataataaga atttagagct tgaagcatca ggagagtgat catatgaaat taacgatttt
    12721 tgataaagta cagaataaaa cttctcaatt tgctatagat gaacttacat attacttgaa
    12781 agccattttt gattttgagt taggaaggac aactgttgag gaagatgcaa atattctact
    12841 ctcaaaagaa tattttgaca ataatgatac gattgggatt gagatgaaga atggaaatgc
    12901 gatattatca ggtaattctg atatctctat tcttattgcg gtatatcgct tacttagtga
    12961 atttggagct gtattcacta gaccaggtag aaaacatgaa ctaattccct cgttatcgat
    13021 atctgactgg aatgagaaag agctctctat tcacgagact gccagttata aacatcgagg
    13081 agtatgtata gaaggtgcag atagttacca gaatataaaa gaatttttgg attggttacc
    13141 aaaaattaat atgaatagct tttttattca gtttgagaat ccgtattcat ttttaaagcg
    13201 ctggtatgaa catgaattta atccgtatgc ggataaagaa gatttcaata cggaaattgc
    13261 acaacaaatg agcgaccttt tagatgaaga attatcaaaa cgaggtttaa tacatcatcg
    13321 tgttggacat ggttggactg gtgaagtact tggatattca tctaagtacg gatgggaatc
    13381 tgggttaata ctacctgaag aaaagaaacc cctagtcgct gaattaaatg gaaaacgtga
    13441 gttatttaat acagcgccaa tactaactag tctatgtttc tcaaatccag atgttggtga
    13501 aagaatgtgt gaactaattg taaactatgc aaaggaaagg aaagatgtag actacttaca
    13561 tgtttggtta tccgatgcac ggaacaatat ttgtgaatgt gaaaaatgta aagaagaaat
    13621 accctcagat cagtatgtac gaattttgaa tcaattagat cggaaattaa gtgaagaggg
    13681 gcttaataca aagatttgtt ttttacttta tcatgaattg ctttttgcac caaagcatga
    13741 agttttagag aatcctgaac gtttcacaat gatgtttgcg cctattacca gaactttcga
    13801 aatgagttat gctgatgtag actatgaaaa caatgtccca cttccaaatg agtatacaag
    13861 aaataatatt gttcttccta actcacttga agaaaatctc tcatatttat ttagttggca
    13921 aaaagtgttt aatggagata gttttgtcta tgattaccca cttggtcggg cacattatgg
    13981 tgatttagga tatatgaaga tcagtaaagt aatctttaga gatgtcgtat atcttaaaaa
    14041 attgggttta aatggttata ttagttgcca agagttacgc gcaggtttcc ctcataactt
    14101 ccctaacttt gtgatgggtc aaatgttgtg gaacagaaat ttagagtacg atgaattgaa
    14161 agcgctctat ttcagttcct tatatggttc tgaatggaaa agtgttgtaa cgtacttaga
    14221 aaaattatca gattactctt catgtgatta ttttaattca ataggtgatc gccaaaatgc
    14281 tgaattatca atgaaataca atatctcaag taaattagca tttaatttta taaatatctt
    14341 ggaagagaat gtggctaaaa attacggaat taaacgtgat gcttggcgac aattaggtta
    14401 tcaccgagaa tatgttatca aattggccaa cgccctttat ctaatggcct ctggagacta
    14461 tctcgatggc caaatccaat ggagagactt tttagattat attagaaatc atgaatcaga
    14521 ttttcaacca tatcttgatg tttaccgtat cattgaagtt gctaaaaatt atgctggatt
    14581 caaattgtag tcctatggat tagattagaa aaatagccaa ttcactattt atttttaagt
    14641 gaattggctt gatgtctatt attagaagga taaataaaaa tatttgatgt tattttttga
    14701 gagggttaca tgaataaaaa aattttttta aactcagcga ttatattact ctctgttact
    14761 tgttttactg gttctgttga tgctttagat aatagtagag tgatagcgat accaagcgaa
    14821 atcgtaaaca gcgaaaacgc atacaacatt actttaaaag cgaaaactga tggagttgaa
    14881 agtgatcttg gaggaagtat tgtttctgaa aatggtgtct tatcaggttc taatggtact
    14941 aaaataaatt tgaagataac cacaaatcct ggttatcgat ttgtaggtta tcaatcattt
    15001 ttagaaaatg gaaatagtac ggatggattg ctacctatcg aaaatgatag ttttgaaatt
    15061 tcagataaaa caggcaatgt gaccgtaata gcaatatttg agtcagttcc agttgatgaa
    15121 tcaatatatt ttagtgatga tttttcagtt gaaaatatta ataattatgt gatatctgaa
    15181 aacctggtag gaaaaattgg aattagtgat gggaaaatga atcttcacgc tccaggtatc
    15241 tcttcgatca aaccaatttt aacaaaacca atcgaagata atgcaacttc tggatatgaa
    15301 attgggttta cattacaaca aattggtgaa gtaaagccat ggaatacttt tagaatagta
    15361 tttaaagaag atcatgatgg gttcatttat gctttagaat tttcaggaca agctgctttt
    15421 ttaaaaaaac tttctagtat agatgcacca cttcaatctg gcgaaaaata tgctgaaaca
    15481 agtcatattt taggaagtga agagcataaa gtacgacttg tagtcaaagg taattcagta
    15541 acagttagtg ataatggaat accattatta agttacaaca gcccaaacaa ttggaatgat
    15601 gcccaagcat ctattgtttt ttcaccagtt tcaaatcgga gtgtttctct agatgatatt
    15661 attgttcgaa gaactcaaac cttaagacct ttccgggtcg tttctcgatt agatggtcag
    15721 gaggtatctg gagttctgcc tggttcaatt aaaggaacca caagtcaagt ttttgttgga
    15781 gattcactta atttagaggt cattgaaaaa tctgggtacc aatttattgg ttttaaagat
    15841 agtgctggta attttcttga tttaactact ttcgttgttc caaatgagga gtcagagtta
    15901 gtgctgtatg ccgattttga gtcagtggat gtagtgattc gtgaaccaaa gactttctac
    15961 attgatagtc taggaggaaa tgattctaat aacggggaaa ccgaaaatag tgcatggaaa
    16021 tcatttgaac aattaaggaa aaagtcgttt gtagctggag atagaatatt aataaaacgt
    16081 ggaagtcggt ttgttggaga aagtgctttt cttacattta aaggttcggg tagtcaaaat
    16141 actccaattc taatttcatc ctatggtgaa ggtgagttac ctttattaga agggcaaggg
    16201 aaaattgaaa atgtaattaa gttgtataat caagagttta ttacaattga aaatcttgag
    16261 attacaaatt tggatccaaa tttttctaca agttttgaat tgaattctaa taataatcgt
    16321 acaaaatcac ttcgtggact acatgtggtc gctgaggatt atggggtcgt tcatgatata
    16381 aatattcgaa atctatatat acatgacata aatggtaatt taagttcgaa atggaatgga
    16441 ggaattttct ttgatgttta tggtacaact atacctacca aatacgatgg tatattaata
    16501 gaaaataatt atctagaaag ggtcgatagg tcgggaataa aattagttgg atcaacatgg
    16561 gcaaaccaaa atttgaaaaa taataaaaat gttccgttaa attggtatcc atctacaaat
    16621 gtagttgtta gaggaaatcg tattgagaag gcaggtggtg attctctaac tgttagagat
    16681 actgatggtg cattgattga atacaatatt tctgctgatg ctagatacca aaacactggg
    16741 tacaatgcag gtatatggcc tttccaagct tcgaatacag ttattcaata caatgaatca
    16801 tttagaacgc atggtgttca agatggtcag ggtttagatt tagatcatat ttctaataat
    16861 tcagtgatgc aatataacta cagtcatgat aatgaaggtg ggtttatgtt aatcatgaac
    16921 tggtacgaac aaacatctcc tacagttcgt tataatatca gccagaatga taaagacaaa
    16981 atttttgaat tggctagagg aggagcacaa ggaactgcaa tttacaataa tacaatctac
    17041 tctgattcga aattaactgg acgagcaggt gtaattgata tgccaagtac gtcaggtgga
    17101 acaggagtaa aagatatctt tttatttaat aatatttttt actttgtaga tggtgagaaa
    17161 atgcttgttg aagcaagtga tgcaggtaaa tataaagata atattcattt ttataataat
    17221 gcctatgttg gtgtcgaggt gcctaatgat cctagagcaa tcactgaagg gatagaatta
    17281 aatggtattg gtacgggacc aattgataat aaatcaatga tcgcaaatac cgggaaatat
    17341 ttaactggtc aattagacgg gtataaaatt cctttcaaca gtgtattggc aaatagtggc
    17401 gtatcaaaag aagatgcaat tacttatttc tatgaaaaat tagggattca gcaacaaatt
    17461 gattttattg aaaatgggtc gttaaatatg tccccaatag aagccttttc tttagctcgt
    17521 caaacgaata gtatagatgc aatcgctcgc tcatatccaa aaattgatgg agttaactat
    17581 gatattgact tctttggaga atcgatttta acagacaatt tatctatagg tgctgctcaa
    17641 gttaaatgag tgaaacagct agttattttt cattaagtca aatagaatga tttttttcgt
    17701 taaaacacaa tgaagaaact tagtctaaga atttttaaag tgaaaatcaa aattacagtc
    17761 tgattctcaa taaattgtaa tataaattta cataataaat atttcagata tgatattaat
    17821 aataattgag ataaataaat tatttggata aggaggtaac aatatgagaa aaaaattgat
    17881 agccacgatt gcattttgcg tagtttgtct atttctctat tcatttgttc ctcaatcttt
    17941 cggtactcca actatttttc agacacctta taaaacctct gtgaaatccg aatttgaagc
    18001 attatttcat aaacatggta ttgatgtctc agaaaatgat ttttgggcta catcattaaa
    18061 tggtcgaaca cctcaagaca ttctaaatga aaaagcaaaa ttactatata taaaattcaa
    18121 tttattagaa aaagaagccc ggaaatatgg ttttaataaa gaaaagttag attttaaaaa
    18181 agtagattgg aagttagtat cagatcgata tattgaattg aaacaaatag ttattgatga
    18241 aaaaataaaa accgtaaatc atgatcagat taaacaatac tatttagaaa ataatctaaa
    18301 ttttgctcgt caagacctaa taaatggaaa aatctctact tggaatgatg gattaattat
    18361 ttctacagaa tctgttgaaa taaatgaaga aactgttaga ttggtcactg agagatttcc
    18421 tgatttagaa ttgcaattag agaatatcga ggtgggccaa cagttttcat ggaagcaaaa
    18481 tggtatttat tatactttct cttgtctttc tagggaagat aagggaatta ttccactttc
    18541 tgaaattact gatgcagttg ctatgcaatg tgccgaggaa cttgttgata attggttaaa
    18601 taaagaaact gactctttaa aatagtccat aattattgac aatctaaagt taacaaaaat
    18661 tttatgttaa tttcaaagga attgggaata ttcgtactga aaaactgatt tcaattataa
    18721 tgtaagtgtc ttagttaaaa cggtaatttt tgtagctata ctaattaata gtttgcaaaa
    18781 taggattatt ttaatttatt agggctaaac attttttaaa gtatttgtaa ctatgggagg
    18841 ataaagatga agagcaacaa agaacaaaaa tatttttggt tgacattctc attgattgtt
    18901 gcattgatga tttggtggtt tttatcgaat tatgatcgaa cctctcgtag ttttccaaat
    18961 atcattttgg tttggaatgc tttattaatc atgatagaca aagggtttat ctttgaagat
    19021 atattttcaa gtctaacttc agttttcttc gggttcacgt cgggctttct attgtcggtg
    19081 cctaatgcat tgtttatgtc ctggtattct ccatatcgta acattgtata tccttggata
    19141 caatatatca gaaatatccc accacttgcg tatgttcctt tagtagtaat ttcggctggg
    19201 gtcgggctgt tacctcaagt tattgtaata gcgatagcta cttttctgac tatgactgta
    19261 acaatttatc aaggcattat taatattgat ccaaatttaa ttaaagcagc aagaatttta
    19321 ggtgcatcag attttgaaat atttaaaaga attttggttc cagcatccat tccatttatt
    19381 atgacagctg tcagattagg tacatcgatt tctttaacta caatcattgc agctgaatct
    19441 actggtgcta catcaggtat gggaatgaga atacggtctt taaataactc ttttgattcc
    19501 tcaggaatgc ttttgtatat catattgatt ggagtaattg gtttactgtt aaataagtta
    19561 gttgatttga tagaaaggaa gttaactgga tggcaacaga agtaaaaaaa attaaggtca
    19621 aaattgaaga agtttcaaaa tcatttcagt caattcatgg tgaggttgtt gcactaaatc
    19681 aaataaattt agaaatcttt gagaatgaaa ttgttacagt tgttggtcca tcaggttgtg
    19741 gtaaatctac tctactaaac ttggttgcag gtttggaacc tgtaacttcc gggaaaattt
    19801 attgtgatga taatgaaatt gttggcgttg gagttgagcg tggtgttgtt tttcaacaat
    19861 atgcactatt tccttggatg agtgtacaac agaatgtaat gttcggacct gaaatgcaag
    19921 gaaaatcaaa gttagaagct agcgaaatag ctaacaagta tattaaaatg gttggattac
    19981 aagaattttc caatcattat ccgaaagaat tatcgggagg aatgaagcaa agagttgcaa
    20041 tagcaagagc gtatgctgtt aatccgacga ttctattaat ggatgaacca tttggagcct
    20101 tagatgccca aacgaggatt caactgcaag atgaattgat tgaaatgctg gaacatgaac
    20161 gaaaaacatg tttgtttatc acacatgata ttgaggaagc aatacttcta ggaaatcgag
    20221 taattattat gagttcaagg ccgggagaaa ttaaagaaat tgtgaatgtt gatttaccgt
    20281 ttccaagaag tcaatccata aaatttgaaa atgattttat agatattaag aaccacattt
    20341 ggtcacttgt atataaggat tttcttaata ttaaaaagtg acacacttat actctttttt
    20401 gagagggaaa aatgattaaa tttgttaaga ataagtattt caattggatt attagtctaa
    20461 tcactttaat tattttggtt gcatgtagtt ctaatcaaac tttaataaga gacaattcag
    20521 ccaatataga taaaataaga attgcatata tgccaaattt tgcaagtctt catgacatta
    20581 ttactggaat aaattcaggt atctttaaag aggaggggct tgaagtcgaa ttgattgaat
    20641 ttgctgatgg tccaactatc attgcatctt tagagtcagg ttcaattgat attggtaata
    20701 ttggtccggg tgcccataaa ttggcgattg aaggtagagc agaagttgtt gcatttagtc
    20761 aacttgggaa tgctgacgaa ttgattgctc ggtcggatag aggaattgat tcaataaagg
    20821 atttgagggg aaagaaaatt ggaacagcat ctgggacatc agcagaaaca attctaaagc
    20881 ttgctttgtt agatgcaaat ttgtctgaaa aagatgtaga aattattgat atggatgcct
    20941 ccgctattgt tacagcgatg ttgtcgggat caatagatgt agctgcaact tggtcaccta
    21001 atacaacttt aataaagcga gaattaaagg aaaaagttgt tgtattagct gataattcac
    21061 gttatagaga ccaatctcca gctattgctt catatgtaac ttttccgggg tattctgaaa
    21121 aaaacaatga aaaaatttcc aagtttttaa aagggttata tcgtgcaatg gattatcgag
    21181 ctgaacatat gaaggaagtt tcaaaatggg ttgctaccca aatcggttca gatatcacag
    21241 ctgttcaaga tcaactacaa gatggagagt ggttaacaag tagacaaatg attcaattga
    21301 ttaacactgg gatacttcaa cagtattacg agaaacaaca aaaaaattta atagtatctg
    21361 gaatagtaga tatctctagg aacattaatg aatatgttct aattgatcaa atgagtagta
    21421 ttttaaagga gattaaataa ttcttgtgaa atataattag ccattttatt atcaataaaa
    21481 gtaacgttga ttcgataatc attcatagtt ttcaagaaaa catgaggtaa tgcatgatag
    21541 aatattacaa ttttaataaa agtgaattag aaaagcatag tagaattcca ttgattgtaa
    21601 aaaagaataa tgaggaaatt tttatttcac ttgctctaga aatggtagaa ttaataaagg
    21661 aaaataacga aaaaaatgag aaaactgtca taatttgtcc tgttggacca gttggtcagt
    21721 atccgcattt tgttagatta gtgaatcaat ttaagattga tttgtctaat gtttggttta
    21781 ttaacatgga tgaatatttg ttggaagatt tgcattggat agacgtagta caccctctta
    21841 gttttcgagg atttatgcag aaaaatgtct acagtcaaat acatccaact cttattatgt
    21901 cagaagaaca aagaattttt ccagatcctc ttgatataga ctcgatttca aataaaatca
    21961 aagaattagg taaaatcgac ttatgtattg gtggaattgg cctaaatggg cacattgcat
    22021 tcaatgaacc ggattcaaca ttaacagttc aagaattttt aaaattaggg tcgcgagtgt
    22081 tacctatttc tgtcgagaca aaggttatga atggtttgac ggtattaaaa ggagctgtag
    22141 aagaagtgcc taattattgt gtaacaatag gaatgagcga gatttttcaa gcgaaaaaaa
    22201 ttcgacttgc agtttttcgt gattggcatc atgcggtcat acgtaaaaca gtttgttcta
    22261 agccagatac tggatttcca tcaactctaa tgcaaatcca tacaaattgt tctatctatc
    22321 taaatgaatc gttagcaaat taacctatgt tcaaacacat acagaatata tataagttta
    22381 ttaccctttt gatcagatac ctaatgagag aagattctct cattttttta atcaaaattg
    22441 tttacaaatg tagtcggatg ttgtataatt tgtttacaaa tgtagtcaga aaaggagtaa
    22501 tctatgaaac aagcaagcta tcccattcaa ggcgtgacct gcgcttcctg tgctatgaca
    22561 gtcgagaaag ccttgaataa gctagatgga atacaaaacg ccagtgtgaa tctagcaacg
    22621 gaaaaaacaa acattcagta tgatccagcc catctgagct tatcagatat cgacagctgt
    22681 tgaaaaagca ggttataaag cggtactgcc aaaaacacaa gagtcagaag ctcaaccaag
    22741 cggaaaagaa caacacaaaa atgatttatg gcacagattt atctggtcaa ccattttcac
    22801 gcttccacta ctctacattg caatgggacc tatgttacca ggtgggggat tgccattgcc
    22861 agctatctta caccagccgc tagtttttgc cctagttcag ctcattcttg tattaccagt
    22921 cctatatgtt ggtcgtgcat tttatcaaaa agggtttaaa accctgtttg ccggtcatcc
    22981 caatatggat agtttgattg ccgttgggac aagtgctgcc ttgtttcaag ggatcattat
    23041 gactgacgat tttgattgct accaaccaag tagccaccca acatggacat cctgagctct
    23101 attttgaatc ggcagctgtt attttaaccc ttatcactct tggaaaatac atggaggcat
    23161 tatcaaaaga gcgtacttca gaagctatca gtaaactgat gaatctcgcc cctaaaactg
    23221 cacgcgttct ctgtgaaggt caagaagtga ccctcccctt agaccaagtc aaagtaggag
    23281 atgtccttca agtccgccct ggtgaacaga ttccagttga tgggataata gtagaaggcc
    23341 aatcgacaat tgatgaatcc atgctgacag gggaaagttt gcctgttaaa aaaatatcgg
    23401 ggatacagtc gttggtgcga ctctcaatca acatggtgct ttccaaatgg aagcgacaaa
    23461 agttggagca gataccacat tgtcccaaat tattcgtttg gtggaagaag cacaggggtc
    23521 aaaagctccg attgcgcagt tggctgaccg cgtttcagca gtctttgttc caattgtaat
    23581 gggattagcc gtcctttctg gccttgcttg gtacttcttg ggacaagagc cctagatgtt
    23641 ctcactttcc attaccatct ccgtccttgt cattgcctgc ccgtgtgcct tgggccttgc
    23701 cacaccaacc gctatcatgg ttgggactgg aaaaggggca gaaaatggtc ttttgttcaa
    23761 gtctggtcaa actattaaaa ccctacaagg tgtgaacacc attgtcttcg acaagactgg
    23821 gaccattact gagggcaagc cacaagtgac agacatccac ctttt
//
LOCUS       DASFQD010000021        23824 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.021, whole genome shotgun sequence.
ACCESSION   DASFQD010000021 DASFQD010000000
VERSION     DASFQD010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 23824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23824
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.021"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            91..318
                     /locus_tag="U1021_000647"
     CDS             91..318
                     /locus_tag="U1021_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001870927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4711217.1"
                     /translation="MRYRRIKDLREDADFTQEFVANYLFCSQASYSRIESGKRGLSIE
                     DLIRLSNLYCVSTDYLLGLSDYPKRIKKNIK"
     gene            604..843
                     /locus_tag="U1021_000648"
     CDS             604..843
                     /locus_tag="U1021_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEM4711218.1"
                     /translation="MTKVVKIKYIPVENSIAEWATKKSLMKRWDGLNIHTLNRWLSEM
                     RENKKFKHYVINPTHKLVFINLDGFEEFLTWKEKN"
     gene            933..2453
                     /locus_tag="U1021_000649"
     CDS             933..2453
                     /locus_tag="U1021_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4711219.1"
                     /translation="MFYKRRETKTGKIRFEVGDSYKDPLTGKWKTASVSYYKDTSSAR
                     KKAEFELQEKIENLLNVTQSKINVETILTFKDLREAWFESWCVSVKKQTADREKLVLK
                     RLGEIIGDDYLLTSIKPLLLEKILKDYIRIYDCSASTFSHIRSSLNKILNYGVLHQIY
                     QYNPLLAVKINVSKSKKRKAKLRKKMQFLEVHELLVFFEELSKRRNPNYYDLAIFLLF
                     TGIRIGEAGAVVESSVDLEKAILDVSRSLQSHDLKVDDFYYDEIKTDESERYVRLPQI
                     AVDAYLRALQRSNEFDKYMFKNPKKSFRKSSSVFRTEYGSPITSHSFREIISRIETDL
                     KKNCMERYGFEWKKHVTPHSFRHMHITYLQRGDAPVPLKEIMERVGHVNPETTMGYTH
                     STIESQNQSILVMEKFALDNNFNFKDLKIWKCKYSQSVFELIEENIEQKSLECSLSTF
                     RTLIGINESYAPRHITANILPRVKEDISKYIDHFEIITIRKQDTSQKVDGYKFVWG"
     gene            2545..3396
                     /gene="ylqF"
                     /locus_tag="U1021_000650"
     CDS             2545..3396
                     /gene="ylqF"
                     /locus_tag="U1021_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HEM4711220.1"
                     /translation="MAIIQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPM
                     LTKIVGDKPKLMILNKVDLADPVRTKEWQSYFEGQGIRTLAINSKEQATVKKVTDAAK
                     SLMKDKIERLRERGIQKETLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQ
                     WLKSNKDLEILDTPGILWPKFEDQEVGLKLALTGAIKDQLLPMDEVTIFGLDYFKANY
                     PERLEERFKGMDLEQETPELIMDWTKKLGFRDDYDRFYNLFVKDVRDGRLGTYTLDRV
                     SDLDGND"
     gene            3383..4156
                     /locus_tag="U1021_000651"
     CDS             3383..4156
                     /locus_tag="U1021_000651"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEM4711221.1"
                     /translation="MATIKEVTALLAQVDNLDSPVWADLAQDDRAGVQTAIKKRQKEL
                     EKEAAEDARLEAMLCYEKALYENGVEFIAGIDEVGRGPLAGPVVSAAVILPKGCKIRY
                     LNDSKKIPKSKHEAIYQEVMERAVAVGVGIKDAAVIDQVNIYEATKLAMLEALGQLSQ
                     EPEHLLIDAMKLDTPLPQTSIIKGDANSLSIAAASIVAKVTRDKMMADYDKEFSGYGF
                     AKNAGYGTAEHLEGLNKLGITAIHRKTFEPIKSMVAGGN"
     gene            4159..5166
                     /locus_tag="U1021_000652"
     CDS             4159..5166
                     /locus_tag="U1021_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEM4711222.1"
                     /translation="MTVFFWLFLAAIGLFVLVYFWERRSIFISLFALNILVWALAWII
                     STGILENNEILRLLAIALAMVLALAFLSGPFVLLFTLYLNGFRILKREGVRFHNFLSL
                     GLAIGLTFYLFIAPSVASTLSGISFFNMVFVYVGFLVSYAIIISMLYTTSSFVNLVNL
                     FPGKLDYVVVLGAGLIGDKVTPLLASRIDKGIAIYQKHPGSKLIMSGGQGPDEIIAEG
                     QAMANYALEQGIPAEDIIIENQSTNTEENLKFSYALMKSGSRFALVTNYYHVFRALLL
                     ARKLKIKCIGYGAKTKFYFSLNAFIREFVGYVVMSRKAHLVFLGIVSVLYLLGMIISL
                     M"
     gene            complement(5204..5854)
                     /locus_tag="U1021_000653"
     CDS             complement(5204..5854)
                     /locus_tag="U1021_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002286719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEM4711223.1"
                     /translation="MNPSLKLSLKLSFGEEVANSVTHAVGALFMLILLPITAIHSFQD
                     YNVTAVVGMSIFVISLFLMFLSSSIYHSMPYASTHKYILRIIDHSMIYIAIAGSYTPV
                     ALSLVGGWLGYLIVGLQWGLTIFGILYKIFAKKINEKFSLFLYLFMGWLVVFILPAIL
                     QKTGLIFGILMLAGGLSYTVGAIFYSKKKPYFHMIWHLFILLASALQYIAIVYFMI"
     gene            complement(5844..6395)
                     /locus_tag="U1021_000654"
     CDS             complement(5844..6395)
                     /locus_tag="U1021_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1836 domain-containing protein"
                     /protein_id="HEM4711224.1"
                     /translation="MKQTIPYWHELPDLDLYLDQVLLYVNQVVNSQESLEQKSLYSMK
                     INSSLGNETDDRTGVHQGKLTTDNVDIRRVLTAAMINNYVKHKQLEKPVKKKYQKQQV
                     ARLIALTILKNVFSIQEISQTLHLLRQTDSSEILYNHFVDCMRNEENEETPDIIRYAC
                     QSVKLYYKTRQLTMELERKFHES"
     gene            complement(6492..6803)
                     /locus_tag="U1021_000655"
     CDS             complement(6492..6803)
                     /locus_tag="U1021_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEM4711225.1"
                     /translation="MQEKHEQTITLTAAELLGLIQTESVQLLDVRDPEEYSAGHIGGA
                     INCPMDRIAAFDGPVDQHYLLICKSGKRSKLAREIMSSKGFKANDIAGGMEAWDGLIV
                     K"
     gene            6948..7406
                     /locus_tag="U1021_000656"
                     /pseudo
     CDS             6948..7406
                     /locus_tag="U1021_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002904502.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar O-acetyltransferase"
     gene            7465..8307
                     /gene="dprA"
                     /locus_tag="U1021_000657"
     CDS             7465..8307
                     /gene="dprA"
                     /locus_tag="U1021_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HEM4711226.1"
                     /translation="MNNFELFKWKKAGLTNLNVNKVLAYQEKHGKKLTLRNVAIVSEC
                     KNPVLFMENYKNLDTKACREEFNKYPSFSILDDIYPLALKQIYNPPVLLFYQGDLELL
                     EKSKLAVVGTRNASKNGIQSVQKIIKELNNRFVIVSGLARGIDTAAHIASLKNGGQTI
                     AVIGTGLDNIYPKENKDLQTYIGKHHLVLTEYEAGAQPLKYHFPERNRIIAGLVEGLV
                     VCEAKMRSGSLITCERALEEGREVYAIPGSIMDGKSDGCHHLIQEGAKCVTSGLDIIS
                     EYQF"
     gene            8400..10493
                     /gene="topA"
                     /locus_tag="U1021_000658"
     CDS             8400..10493
                     /gene="topA"
                     /locus_tag="U1021_000658"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005591982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEM4711227.1"
                     /translation="MATKTVSKKKTTTNKNLVIVESPAKAKTIEKYLGKNYKVVASVG
                     HIRDLKKSSMSIDFDNNYAPEYINIRGKGPLINSLKKEAKNAKQVFLASDPDREGEAI
                     SWHLAHILGLDANDKNRVVFNEITKDAVKNAFQEPRTINLDLVDAQQARRVLDRIVGY
                     SISPILWKKVKKGLSAGRVQSVALKLIIDRENEISNFKPEEYWTIDATFKKGSKKFQA
                     SFYGIDGKKTKIENNEQVKEILARLDGDDFLVEQVERKERKRNAPLPYTTSTMQMDAA
                     NKINFRTRKTMMVAQQLYEGVSLGTGGTQGLITYMRTDSTRISPVAQAQAADFITERF
                     GATYSKHGNKVKNASGAQDAHEAIRPSNVNLTPESIAKYLDKDQLRLYTLIWNRFVAS
                     QMAAAVFDTMSVRLGQNGIVFAANGSQVKFDGYMAVYNDADKNKMLPDMEQGDTVVRA
                     STNPEQHFTQPPARYSEATLIKTLEENGVGRPSTYAPTIETIQKRYYVKLAAKRFEPT
                     ELGEIVNKLIVEFFPDIVNVKFTADMEQKLDDVEIGKEQWQKVIDGFYQPFKVELSKA
                     EEQMEKIQIKDEPAGFDCDVCGHEMVIKLGRFGKFYACSNFPDCRNTKQITKEIGVTC
                     PVCQKGQVIERKSKRNRLFYGCDRYPECEFTSWDKPVGRSCPKCDHYLVEKKVRGGGK
                     QVVCPNGDYEEDKIK"
     misc_feature    10909..11043
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00557"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L10 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00557"
     gene            11070..11564
                     /locus_tag="U1021_000659"
     CDS             11070..11564
                     /locus_tag="U1021_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001287276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEM4711228.1"
                     /translation="MSEAIIAKKAELVNAVAEQMKAATSIVVVDARGLTVEQDTVLRR
                     NLRGAEVEYKVIKNSILRRAAEQAGLEGLAELFVGPSAVAFSNDAVAPAKTIYDFAKT
                     ADALEIKGGAVEGKVSSKEEIEALATLPNREGMLSMLLSVLQAPVRNVAYAVKAVAEK
                     EDAA"
     gene            11630..11995
                     /gene="rplL"
                     /locus_tag="U1021_000660"
     CDS             11630..11995
                     /gene="rplL"
                     /locus_tag="U1021_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018371186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEM4711229.1"
                     /translation="MALNIENIIAEIKEATILELNDLVKAIEEEFGVTAAAPVAVAAA
                     GGAAEEAKDSFDVELTSAGDKKVGVIKVVREITGLGLKEAKELVDGAPAMVKEGVATA
                     EAEEIKAKLEEAGASVTLK"
     gene            12255..12428
                     /locus_tag="U1021_000661"
     CDS             12255..12428
                     /locus_tag="U1021_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017767814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711230.1"
                     /translation="MQKNEQSSRQIVMCHLMAIMGIDIEKATWIVGEMEESGLIQFDD
                     MGNVGLLVLEGQS"
     gene            12425..13249
                     /locus_tag="U1021_000662"
     CDS             12425..13249
                     /locus_tag="U1021_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiator protein A"
                     /protein_id="HEM4711231.1"
                     /translation="MKRITANHYQTSERYYKLPKLLFESERYKDLKLEVKVAYAVLKD
                     RLELSLSRGWIDEDGAIYLVYSNSKLMALLGCSKSKLLTIKKTLREYGLIDEVQQSSS
                     EKGRLANKIYLGELEHEPIPVSNSDGGGVQKTLGGYQNQPGPVLTSATSETEVSETDR
                     SETKESESVIEDEEEKESLTSKKCDNDNFQRKVDRVTRYDRDYIWGLVHDQLRQVGLS
                     QAASDYVMIYFDHRYQYALENMRFADRAETIAEYVFNGVLSEWTKVQRLKELKGGE"
     gene            13407..14762
                     /gene="dcm"
                     /locus_tag="U1021_000663"
     CDS             13407..14762
                     /gene="dcm"
                     /locus_tag="U1021_000663"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000670034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEM4711232.1"
                     /translation="MKFLDLFAGIGGFRLGLTRQGHECIGFCEIDKFARKSYKAIYET
                     KGEIEFHDIRQVTDQDFRQLRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIAR
                     AAKQIQPRFLFLENVKGLLSHDKGETFRTILATLDELGYDAEWQVLNSKDFQVPQNRE
                     RIFIIGYSRRYRPRFLFPLRGENSSASLERLGNVNPSGKGMNGEVYLSRGLAPTLTRG
                     KGEGTKIAIPILTPDRLEKRQHGRRFKGNDDPMFTLTSQDRHGVVVAGTLPTTFVQTG
                     RVYDLSGLSPTLTTMQGGDKVPKILCREEAPHLKIREATKLGYAKAIVGDSVNLAYPE
                     STKRRGRVGKGISNTLTTSDNMGVVVAALEYRKDKWYEVTGIILDGKLYRLRIRRLTP
                     RECFRLQGFPDWAYDRAERVSSKSQLYKQAGNSVTVTVIEAIAREFRKIEEEEKHEII
                     T"
     gene            14746..15174
                     /locus_tag="U1021_000664"
     CDS             14746..15174
                     /locus_tag="U1021_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000770700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711233.1"
                     /translation="MKLLHNKSIRNCTELEEAIHQAEVERFSEMIASLPNYDCDIDVT
                     FEDDYHKEMNYPLAYESNLHRIFEFIETQDIKNGVDTYLTDENNLAFRAYGQGYSWND
                     KNDVVTTLITVKYFGEGRSPIDMSKVFTPLTQALEKELSV"
     gene            15184..15567
                     /locus_tag="U1021_000665"
     CDS             15184..15567
                     /locus_tag="U1021_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017649786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711234.1"
                     /translation="MLEIYLSRNTSRNQKLLSFCDSHGISYSCKEVSHLSREELLRLF
                     TKSSDCFTLLSPSLQRFKGHREMKLSELVTVVLRKPDQNLRLPIVVCEDKVYPDMSLE
                     EARTFLPRSQKVVSFREHLFKDLVT"
     gene            15577..15810
                     /locus_tag="U1021_000666"
     CDS             15577..15810
                     /locus_tag="U1021_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003065178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM4711235.1"
                     /translation="MNDRFWENLEIIVMEKGLSWADLARQMFKGQYVYPSEFNRLYQT
                     FRHYKSHRLMPQGKWVEKIVTVLEIDYEDLFRR"
     gene            15813..16301
                     /locus_tag="U1021_000667"
     CDS             15813..16301
                     /locus_tag="U1021_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018165725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4711236.1"
                     /translation="MKRLLVMYGAIHVNVLLVSLYLVGWLNGAWLPVLQVTFLALLLW
                     GWKRFKIPKRNLSLKERGLWLLGSLGVMVSIVFLLNASVVEEVFYREVLWGVLPQPVV
                     QVLLTSSLFALAHHPSSLFTWVLYGSLGLTLGVARGQTDCLSSTLVHLSWNGIVFFLS
                     LL"
     gene            16379..16867
                     /locus_tag="U1021_000668"
     CDS             16379..16867
                     /locus_tag="U1021_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711237.1"
                     /translation="MSSEQQERQAIQYAERSTMFTVKVLLKLLEWSARHALAQDSAYK
                     VGVQKLEELLQSPYAIESLNISKDILDKPVDVGKFKELVESENLPIAISWQGDYLHFY
                     AKDKSLLDKHLDELLQKLVSNPEKLKGLTMDKTLDEEIAQAKEQIVMSEPSAVKTKEV
                     IL"
     gene            16867..18687
                     /locus_tag="U1021_000669"
     CDS             16867..18687
                     /locus_tag="U1021_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003086094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HEM4711238.1"
                     /translation="MVSGKKVFIFGILGLALGYFCHRLVLLYDSLPNQPPLERLAYLL
                     GEGQNQVLNPLWNGNFTGKSVLGFCFGFVTMGLVYLYVSTGQKVYREGAEYGSARFGN
                     SHERKAFLSKNPFNDTILSRNVRLTLLEKKAPQFDRNKNLVVIGGSGSGKTFRFVKPN
                     LIQLNCSNIVVDPKDHLAEKTGKLFLEHGYQVKILDLVNMTNSDGFNPFRYVETENDL
                     NRMLTVYFNNTKGNGSRSDPFWDEASMTLVRAISSYLVDFYNPPGSTKEEADSRRKRG
                     RYPAFSEIGKLIKLLSKGENQDKSVLEVMFEIYAKTYGTENFTMRNWADFQNYKDKTL
                     DSVIAVTTAKFALFNIQSVIDLTKRDTLDLKTWGTQKTMVYLVIPDNDTTFRFLSALF
                     FSTVFSTLTRQADVDFKGQLPIHVRSYLDEFANVGEIPDFAEQTSTVRSRNMSLVPIL
                     QNIAQLQGLYKEKEAWKTILGNCDSLLYLGGNDEETFKFMSGLLGKQTIDVRSTSRSY
                     GQTGSGSTSHQKIARDLITPDEVGNMKRDECLVRIAGVPVFKEKKFFPLKHKNWKYLA
                     DKESDERWWHYHIDPLKTEEVPFEPSDHKVRDLSKESTLH"
     gene            18705..18947
                     /locus_tag="U1021_000670"
     CDS             18705..18947
                     /locus_tag="U1021_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012678629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711239.1"
                     /translation="MNQKFTGFVYGVDASSMFAQAMVLLQKGMVATGAFLVVMGIINL
                     STNIKDGGPGVRNAILEIVGGVMVGAAGAFITQITI"
     gene            18964..19818
                     /locus_tag="U1021_000671"
     CDS             18964..19818
                     /locus_tag="U1021_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017649781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein"
                     /protein_id="HEM4711240.1"
                     /translation="MNNTLPSAFVFLASEKISSDSLFEGFNVDLESTANLVKSLADYN
                     PTVWSYMSAITKGVMQPLGVAILAAVLVLEFSKMAKKIANSGGAMTFEAIAPMIVSYI
                     MVAVVITNTTVIVEAILAVASHIIEGVAGVVSHGGTTYETISGLKGSGIIGKLIVGFF
                     AILIWLVRLVSVMVVNLLITIRFIQLYLMIPFAPLTIPTFLSDDWRSVGIGYLKNIMV
                     YALQGVLIFLIISLVPLFESVGKLALSNGAGVMETLATAFGGLVQAILLIIALVGSQR
                     TARSILGM"
     gene            19880..20233
                     /locus_tag="U1021_000672"
     CDS             19880..20233
                     /locus_tag="U1021_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrgI family protein"
                     /protein_id="HEM4711241.1"
                     /translation="MNTRVFKDITKVQHRAWLGFTTRQVIFVLPAVAITILILGLNLF
                     YWQFGDWFVYGLIFTFTIPLMLFGVYRPNDLPFETYLNYRWHYEMTIPDRTLTGQKGI
                     QREKNKSLNETKDLF"
     gene            20190..22541
                     /locus_tag="U1021_000673"
     CDS             20190..22541
                     /locus_tag="U1021_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006738651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM4711242.1"
                     /translation="MKKTNRSMKPKTSSKYKKTRKPKEEVLPTTVNTLLYQGLFPNGL
                     MQVTPDYFSQSFLLGDVNYQTVGLEDKGAIMETYSDLINSLDDKTNFQLTIFNQRVNL
                     DKFRKGVLYPLHEDGYDTYREELNRIMENNLEAGENNFSAVKFISFGKSDQNPKLAYR
                     SLSQIGEYFKSGFSEIDANFTLLSGESRVNHLADMLRGENHLPFTYQDLVRSGQTTKH
                     FITPTSLSFKHKNYVEIDDRLLQIVYVRDYGMELGDKFLRELMQSDLEVMISLHAKGA
                     AKSEAMTKLRTKKTLMESQKIGEQQKMARSGVYLEKVSQVLESNIDEADELIKTMTQT
                     GDKLFDTLFLIGVFAEDEDQLKHSLDIIKQVAGSNDLVIDNLTYMQEAAFNSLLPFGK
                     NYLEGVSRSLLTSNIAVNSPWTSVDLQDKGGKFYGINQISSNIITIDRGKLNTPSGLI
                     LGTSGAGKGMATKHEIISTKLKEADTDTEVIIVDPENEYSIIGQAFGGESIDIAPDST
                     TFLNVLDLSDDNMDEDPIKVKSEFLLSWIGKLLDRKMDGREKSLIDRVTRLTYKHFET
                     PSLVEWVFVLSKQPEQEAKDLALDMELYVEGSLDIFSHRTNIKTDSHFLIYNVKKLGD
                     ELKQIALMVIFDQIWNRVVKNQKLGRKTWIYFDEMQLLLLDKYASDFFFKLWSRVRKY
                     GAIPTGITQNVETLLLDANGRRIIANSEFMILLKQAKSDREELVHLLGLSKELEKYLV
                     NPEKGAGLIKAGSTVVPFRNKIPLQTQLFDIMSTDPEKMRGES"
     gene            22538..>23824
                     /locus_tag="U1021_000674"
     CDS             22538..>23824
                     /locus_tag="U1021_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017649001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HEM4711243.1"
                     /translation="MTREQQNVKVARKTFQSSLKASRIHYRREKKGLKRSLPKRRFIM
                     RRAEKAETREQRQALKQTYQEEKDLATDTFKEAIAYVSPRWLKSKEIKKYRLPQARQR
                     LVVARKHLAEVKKAEKEEAVTSKVTDQKKPTESKTSRFQFQKEKPLERLQAEKEVKSA
                     KRDVKQLKKAHQFKNPSTKVKRGLRYVTSESLDVVAQDDDLEGIRTLKESVIKGRRYG
                     KFTYQSGKLLVKSGQTGLRFTKTKADHSKERYQNFKKGKGFTRQKPLKPRRRYQTFLK
                     QARKQSVSGITKVIQAIKNSLTFFSSIALNPMTWVVSGLLFFLLLMMSFVIGISGTTL
                     IQQDESELTKAYTHMTWEDAENTRTNPTGITYYTKIDDVMGFMNLKYQDYALEEIMEE
                     GDKTYQAYLSQLWQDLNGRDSLKSMLELSKESAYKLS"
BASE COUNT         7384 a         4379 c         5305 g         6756 t
ORIGIN      
        1 taatactcct taatgaacat ataccagttt ggtatattat tgaaaagtcc tgaatattca
       61 ccgatatact tgttatagga gtgaacagac gtgaggtaca gacgcataaa agatttaaga
      121 gaagatgcag attttactca agaatttgta gcaaattatt tattttgtag tcaggcctca
      181 tattcgagaa tcgaatctgg aaaacgtggt ctgtcaatcg aagatttaat tcgtctctct
      241 aatctatatt gtgtcagtac agattatctc ttaggattat cagattatcc taagaggata
      301 aagaaaaata tcaaatagtc cctcctggtc ctttgaaaat tgaatagacc gaggtgggac
      361 tttatttatt tgtcgagcag ttgaaagaga tacgcgatga tatgagcgaa aaaatatctg
      421 tttctaaaat tgggttggaa tccaatttgc catgacacaa ataatgttaa tgatacttct
      481 gaacgttcag gctctagtcg aaaaatggag caggtgagat tcctatgttg atgtccgaat
      541 caacccacca atgtcatgaa acttgtctca attttttgct acttatcttt tgaggaggaa
      601 ataatgacaa aagtagtaaa aataaagtac ataccagttg aaaacagtat tgcagagtgg
      661 gctaccaaaa aaagtctgat gaaaaggtgg gatggactaa atatacacac actaaatcga
      721 tggctttctg aaatgagaga gaataaaaaa tttaagcact atgtcataaa tcctactcat
      781 aaactggtat ttatcaattt agatggattt gaagagttcc ttacttggaa agagaaaaat
      841 tagccgataa ttttcagaag atgtgataaa atagagtgag ttaattctat tggctatcat
      901 attttctctt ttaaaaagaa agagagttca aaatgtttta taaaagaagg gaaacaaaaa
      961 caggaaaaat tagatttgaa gttggtgatt cttacaagga tcctctaact gggaaatgga
     1021 aaacagcatc tgtgtcttac tataaggata ctagttctgc acgaaaaaaa gctgaatttg
     1081 aattacagga aaaaattgaa aatttactca atgttactca atcaaaaatt aatgtcgaga
     1141 caattctcac atttaaagat ttgagagaag cttggtttga gtcgtggtgt gtctcagtca
     1201 aaaagcaaac agcagataga gaaaaattgg tactgaaaag attgggtgaa attataggtg
     1261 acgattatct tctaacctca ataaaaccgt tacttttgga aaaaattttg aaagactata
     1321 ttcgaattta tgattgctca gcttcaacgt tttcacatat tcgaagtagc ttgaataaaa
     1381 ttctaaatta cggtgtttta catcagattt accaatataa tccactttta gcagttaaaa
     1441 taaacgtatc caaaagtaaa aaacgtaaag ctaaattgag aaagaaaatg caattcttag
     1501 aagttcatga attattggtc ttctttgaag agcttagcaa gaggaggaat cccaactact
     1561 acgatttagc aatttttctt ttatttactg gtattcgaat tggggaagca ggagctgttg
     1621 tagaatcatc tgtggattta gaaaaagcta tattagatgt ctcccgttca ttgcagtcac
     1681 atgacttaaa ggtagatgac ttttattacg atgagataaa aacagatgaa tctgaaagat
     1741 atgttcgtct tccgcaaata gcagttgatg cttatttacg ggctctgcaa agaagtaatg
     1801 agtttgataa gtatatgttt aaaaatccaa aaaaatcgtt caggaaatca tcatctgtat
     1861 ttaggacaga atatggctct cctataactt cacattcttt tagagaaatc atatcgagaa
     1921 ttgaaacaga tttgaaaaag aattgtatgg agcgatatgg atttgagtgg aaaaaacatg
     1981 taacgccaca ttcctttaga catatgcata ttacatatct tcaaagaggg gatgcacccg
     2041 ttcctctcaa ggaaatcatg gaacgtgtgg gacatgtgaa ccctgaaaca actatgggct
     2101 atacccatag tacaatagag tctcaaaatc aatctattct tgtaatggaa aaatttgcat
     2161 tggataacaa cttcaatttt aaagatttaa aaatatggaa atgtaaatac tcgcaatcag
     2221 tatttgagtt aattgaagag aatatcgaac aaaaaagttt ggaatgttct ttgagtacat
     2281 ttagaacgct aataggaata aatgaaagtt atgcacctag acacataaca gccaatatat
     2341 tgccaagagt aaaagaagat atttcaaaat atattgacca ttttgaaatc attactatca
     2401 ggaaacaaga tacaagtcaa aaagttgatg gatataaatt tgtttgggga tagtttaatt
     2461 taaatttttg gtttattttt ggttttttgt gcatttttaa aaaccaaggg tcttaaaccc
     2521 ttgctaggaa aggattttta ctacatggca attattcaat ggtttccggg ccacatgtca
     2581 aaagctcgca ggcaggtgca ggagaacatc aagcacgttg atttcgtgac cattttggtc
     2641 gatgctcgcc tgcccctatc tagccaaaat cctatgctga ccaagattgt cggtgacaag
     2701 cccaagctta tgattttaaa taaggttgat ttggcagacc ctgttcgtac caaagaatgg
     2761 cagagctact ttgaaggtca aggcatccgt acccttgcca tcaactcaaa agaacaagcg
     2821 acggtgaaaa aggtgaccga cgcagctaaa agcctgatga aagacaagat tgaacgccta
     2881 cgcgagagag gtattcaaaa agaaaccttg cggaccatga ttatcggtat tccaaacgct
     2941 ggaaaatcca ccctcatgaa ccgtctggct ggaaagaaaa ttgccgttgt cggcaacaaa
     3001 ccaggtgtga cgaaaggcca acagtggctc aaatccaata aagatcttga aatccttgat
     3061 acacctggga ttctctggcc taagtttgaa gaccaagaag tcggtctcaa gttggctctg
     3121 actggtgcca ttaaggatca gctcttgccc atggacgaag tgactatttt cggtctggac
     3181 tatttcaagg caaattatcc agaacgccta gaagagcgat ttaagggtat ggatttggag
     3241 caggaaacgc ctgaactcat catggactgg acaaaaaaat taggcttccg tgatgattat
     3301 gaccgttttt acaacctctt tgtcaaggac gttcgggacg gtcgtttggg tacttataca
     3361 ttagacaggg tgagtgactt agatggcaac gattaaggaa gtgactgctc tgctggctca
     3421 ggtggacaat ctggacagtc ctgtctgggc ggacttagct caggatgatc gagcaggggt
     3481 ccagactgct attaagaaac gccaaaagga gttggaaaaa gaagcagcag aagacgctcg
     3541 cttagaagct atgctatgtt acgaaaaagc cctttatgaa aatggggtgg agttcatcgc
     3601 tggtatcgac gaagtcggtc gggggcctct agcaggtcct gtggtgtctg cggcggttat
     3661 cttgcccaaa gggtgcaaaa tccgctacct caacgactcc aagaaaatcc ctaagtccaa
     3721 gcatgaagca atctaccaag aagtcatgga gcgagcggtg gcagtcggtg tgggaataaa
     3781 agatgcagct gtcatcgatc aggtcaacat ctacgaggcg accaagttag ccatgctgga
     3841 ggctttgggg cagttgagcc aagagcctga acaccttttg atagacgcta tgaagttgga
     3901 tacacctcta ccgcaaactt ctatcatcaa gggagatgcc aatagcctat ctatcgcagc
     3961 tgcctctatc gtggccaagg tgacgcggga taagatgatg gcagactatg acaaggagtt
     4021 ctcaggttac ggtttcgcta agaatgctgg ttatggaacg gcagagcatt tggaaggctt
     4081 gaacaagtta ggcatcacgg ccattcaccg caagaccttt gagcccatta agtctatggt
     4141 agcagggggg aactagtttt gacagtcttt ttctggttat ttttagcggc tatcggcctg
     4201 tttgttctcg tttatttctg ggagcggcgg tcaattttta tctcactgtt tgctttgaac
     4261 atcctggtct gggccttggc atggattatc tcaacaggca ttctcgaaaa caatgaaatc
     4321 ttgcggttat tggcaatcgc tctggcaatg gtattggcac tagccttctt aagtggtcca
     4381 tttgtcttgc ttttcacact ttatctaaat ggttttcgga ttttgaagcg agaaggtgtg
     4441 cgcttccata actttttatc tttaggattg gctatcggct taacttttta tctctttatc
     4501 gcaccgtctg tagcaagcac cctttctggt atcagttttt tcaatatggt gtttgtctat
     4561 gttggatttt tagtgtccta tgccattatc atcagcatgc tttatacgac atctagcttt
     4621 gtcaacttgg ttaatctttt ccctggaaag cttgattatg tggtggttct tggagctggt
     4681 ttgattggtg acaaggtgac gccacttttg gcttcgcgga ttgacaaagg catagcgatc
     4741 taccagaaac atcctggcag caagctcatc atgtcaggcg gacaaggtcc tgatgaaatc
     4801 atagcagaag gacaggctat ggctaattat gcattggaac agggtatccc tgcggaagat
     4861 atcattattg aaaatcaatc gaccaacaca gaagaaaatt tgaaattctc ctatgccttg
     4921 atgaaatcag gcagtcgatt tgcacttgta accaattact atcacgtttt cagagctctg
     4981 ctattggccc gaaaactgaa aatcaaatgt atcggctatg gcgccaaaac caaattttac
     5041 tttagcctca atgccttcat tcgggaattt gtaggctatg ttgtcatgag ccgaaaggcg
     5101 catttggtgt ttttgggtat cgtgtcagtt ctttatctgc ttggtatgat catcagttta
     5161 atgtagtaaa aacagcctct agaacaatct agaagctgtt ttcttatatc ataaagtaga
     5221 caatggcgat gtactgcagt gctgaagcca ataggataaa gagatgccaa atcatgtgga
     5281 aataaggctt tttcttagaa taaaagatag caccgacggt gtaggacaag ccaccagcca
     5341 gcatcaaaat tccgaaaata agtccagttt tttgaagaat ggctggcagg ataaagacca
     5401 ccaaccaacc cataaagaga tagaggaaga ggctgaattt ttcgtttatt tttttagcaa
     5461 aaattttata gagtataccg aaaatagtca atccccactg caaaccaaca atcagatagc
     5521 ccagccagcc accgaccaag gaaagagcga caggcgtgta gctcccagcg atggcaatgt
     5581 aaatcatgct atggtcgata atcctcagga tgtatttgtg agtagaagca tagggcatgg
     5641 agtggtagat ggaagaggac agaaacatga gaaataggct gataacaaag atagacatgc
     5701 cgactactgc tgtcacgtta taatcttgaa aagaatggat agcagtaata gggagtaaaa
     5761 tcagcataaa caaggcccca actgcatgtg tgacactatt tgcgacttct tcaccaaatg
     5821 aaagttttag acttaatttc aaactaggat tcatgaaatt tcctttctaa ctccatagtg
     5881 agttggcggg ttttgtagta gagtttgacg gattgacaag cgtagcgaat gatgtcaggc
     5941 gtttcttcat tttcctcgtt tcgcatgcag tcaacaaaat gattgtataa tatttcagaa
     6001 ctatctgtct gtcgaagaag atgtaaggtc tgactgattt cttgaatcga aaagacattt
     6061 tttaagatag tcaaggcaat caagcgggct acttgttgtt tttggtattt tttcttaaca
     6121 ggtttttcga gctgcttgtg cttgacatag ttgtttatca tggcagccgt taatactctt
     6181 cgaatatcaa cattatccgt tgtcaacttg ccttgatgaa ccccagttct atcatcggtt
     6241 tcgtttccta ggctactgtt gattttcatt gagtataaac tcttctgttc aaggctttcc
     6301 tgagaattga ctacttgatt aacatacagc agaacttggt ctaaatagag gtctaagtct
     6361 ggtagttcat gccagtaggg gatagtttgt ttcatgatta tctactctct tttatctagt
     6421 aatgataact agattatata atttttaaaa aataaagtaa agaaaaagga tgcttccttt
     6481 ccgaaatacc cttatttcac aatcaatccg tcccaagcct ccatgccacc tgcaatatca
     6541 tttgccttaa atcccttaga tgacatgatt tctctggcca gcttgctacg ttttccgctc
     6601 ttacatatga ggagatagtg ttggtcgact ggtccatcaa atgcggcaat ccgatccatg
     6661 ggacaattaa tagcaccacc aatatgacca gctgaatatt cttctgggtc acgaacatct
     6721 agcaattgca ccgattcagt ttgtatcaac ccaagtaatt ctgcagcagt caaagttata
     6781 gtttgttcat gtttttcttg catgattccc tctttcgttg gtttaaatta ataagtacga
     6841 taccaaatct tagctggact tgtcaagaaa gattgacttt tagaataaga aatcctatga
     6901 tatgtattaa gaagaaaata ggagcagaag tatgccaaca gatgaagaga tttaacgatg
     6961 agctagatgg taaggtccgc tcggagcaat tgaaaaactg gtttggagct acaggtgagc
     7021 ggatttacat ggagctaaat ttctactgtg actacggtag caatattcat gttggtgagg
     7081 atttttacgc aaattttaac tgtacgatgt tggatgtttg tcccattacc atcgggaaaa
     7141 atgccatgat tggtcccaat gtacagttgc taactccact tcatccacta gatcctgatg
     7201 aacgaaattc tggtttggaa tatggctctc caattaccat tggtgataat ttctgggctg
     7261 gtggtggtgc gacaatctta cctggcgtga ccttaggcaa caatgtggtt gttggtgctg
     7321 gatctgtcgt gactaagtct tttggtgata atgttgtttt agcgggcaat cctgcgtgtg
     7381 ttatcaaaga aatacctaaa aaataattct tcttcgggag aattttttct ttgctttgcg
     7441 aatagactag atgaggtgaa gaaaatgaat aattttgaat tgtttaaatg gaaaaaagcg
     7501 ggtttgacca atcttaatgt gaataaagtt ttggcctatc aagaaaaaca cggaaaaaaa
     7561 ttgaccttgc gaaatgtcgc tatagtgtct gaatgtaaaa atccagtgct atttatggaa
     7621 aattataaga atctagatac aaaagcctgt cgcgaggaat ttaataagta tccatcattt
     7681 tcaattttag atgacatcta tcctttggcg ctcaaacaga tttacaatcc gcctgtactt
     7741 ttgttttatc aaggggattt agaattgcta gaaaaatcaa agcttgcagt cgttggtaca
     7801 cgaaatgcca gcaaaaatgg tattcagtct gttcagaaga ttatcaaaga actcaacaat
     7861 cgctttgtca ttgtcagtgg tttggcaaga ggaattgata cagctgctca tattgctagc
     7921 ctgaaaaatg gtggacaaac cattgctgta attggaacag gtttagataa tatttatcca
     7981 aaagaaaata aagatttgca gacctatatc ggaaaacacc atttggtgct gacagagtat
     8041 gaagctggtg ctcagccact caaataccat tttccagaac gaaatcgcat cattgctggg
     8101 ttggtagaag gattggtagt ctgtgaggct aaaatgcggt ctggtagctt gattacctgc
     8161 gaacgtgcct tggaagaagg aagagaagtc tatgctattc caggttccat tatggacgga
     8221 aaatcagatg gttgtcatca tctgattcaa gagggagcaa agtgcgttac atcaggcttg
     8281 gacatcattt ctgagtatca attttaaaac aagtcttcct ataggaaaat aaatatcttg
     8341 acactgactg aaaaatagta tattctttgt gaggttaaaa atatttgtaa ggtataagaa
     8401 tggctacaaa aacagttagt aagaaaaaaa caacaaccaa taaaaatctc gttattgtag
     8461 agtcgcctgc taaggcaaaa acaatcgaaa aatatcttgg taaaaattat aaggtcgttg
     8521 cttcagtcgg gcatattcga gatttgaaga aatctagtat gtctattgac tttgataaca
     8581 actatgcacc tgagtacatc aacatacgtg gaaaagggcc actcatcaat tctttgaaaa
     8641 aagaagcaaa aaatgctaag caagtctttc tcgcgagtga cccggaccgc gaaggagaag
     8701 caatttcttg gcatctggct cacattttgg gattggacgc aaacgataaa aaccgtgttg
     8761 tctttaatga aattacaaaa gatgcagtaa aaaatgcctt tcaggagcca cgtactatta
     8821 acctagactt ggtagatgcc cagcaagctc gtcgcgtctt agaccgtatt gtagggtact
     8881 ccatatcacc tattttatgg aagaaagtca aaaaaggtct gtcagcagga cgtgttcaat
     8941 cggttgctct caaattaata atcgaccgtg aaaatgaaat cagcaatttc aaaccagaag
     9001 aatattggac aattgatgca accttcaaaa aggggagcaa gaaattccag gcttcattct
     9061 acggtataga tggaaagaaa actaaaattg aaaacaatga gcaggttaaa gaaattctcg
     9121 cccgacttga tggggatgat ttcttagtag aacaggttga gcgtaaggaa cgcaaacgaa
     9181 atgcacctct gccttacaca acttctacta tgcagatgga tgcggctaat aaaattaatt
     9241 tccgtactcg taaaaccatg atggttgccc aacaacttta tgagggtgtc agtcttggca
     9301 caggtggtac ccaaggtttg attacctata tgcgtacgga ttcaacacgt attagccctg
     9361 ttgcacaagc acaagctgct gactttatta cggagcgttt tggtgctacc tattcaaagc
     9421 atggtaataa agtaaaaaat gccagtggtg cacaagatgc ccacgaagct attcgtccct
     9481 caaatgttaa cttaacacct gaatcaattg caaaatatct ggacaaggac cagttgcgac
     9541 tatatacact gatttggaat cgttttgtcg caagtcagat ggctgcagca gtttttgata
     9601 ccatgagtgt tcgtttgggt caaaatggta ttgtctttgc tgctaatggt agccaagtaa
     9661 aattcgatgg ttatatggct gtctataacg acgctgataa aaataaaatg ttgccagata
     9721 tggaacaagg tgacacggtg gtgcgcgcgt caacaaatcc agaacaacac tttactcagc
     9781 caccagctcg ctactctgaa gcaaccttaa ttaaaacatt agaagagaat ggtgtaggtc
     9841 gcccgtcaac ctatgcacca acgattgaaa ccattcaaaa acgttactat gttaagcttg
     9901 ctgcgaaacg atttgaaccg actgaactcg gagaaatcgt taataagctg attgttgaat
     9961 tcttcccaga tattgtcaat gtcaaattta cagccgatat ggaacaaaaa ttggatgatg
    10021 tagaaatcgg gaaagagcag tggcagaagg tcattgacgg tttctatcag ccattcaagg
    10081 tagaattatc taaggcagaa gaacagatgg aaaaaatcca aattaaggat gaaccagctg
    10141 gctttgactg tgatgtttgt ggacatgaaa tggttattaa attaggacgt tttgggaaat
    10201 tctatgcatg tagcaatttc ccagactgtc gcaataccaa gcaaatcact aaagaaatcg
    10261 gtgtgacttg tccggtttgc caaaaagggc aagtgattga acgcaagagt aaacgcaatc
    10321 gtcttttcta tggttgtgat cgctacccag agtgtgaatt tacttcttgg gacaagccag
    10381 tcggacgttc ttgtccgaaa tgcgaccact atctcgttga gaaaaaagtt cgtggtggag
    10441 ggaaacaagt tgtctgtcca aatggtgact acgaagaaga caagattaaa taagattaaa
    10501 ctgctattct caagggaatg gcagttgttt tttatagtca tgttagttta tcttagctta
    10561 cttcgacaag cgaggaaact tcgtttcctt attttcaact ttaaatgagg ctggtcaaaa
    10621 agtccaaagt cacttctcag tgcagtggtt gattgggttt aacaggccag tggagtgaaa
    10681 ctgttcagtg aactgtttca gcctgagctt agaaatgaaa aaatcgaggt aaaaaggttg
    10741 gagataagat ttgcgaagca aatcacagca attcgtgttt cacattccaa gtctgacctc
    10801 tacaactaaa acgaactaaa cggcaatacc agtttgaaaa attgtttaaa aaattaaaaa
    10861 aataggagaa aagtcttgca ttattgaaaa tactgtgtta tgataattga ggtttgaaaa
    10921 aactgaccta agacagtagg ggagctggac tcataaacat cctaccgagg cacaaaacga
    10981 ttattgagat aaacgtattt gtactttcgt gtctaggttt aggtgcgatt tttttgtgcc
    11041 tagcccaaaa taaaaacgga ggtaaaaaaa tgagtgaagc tattatcgct aaaaaagcgg
    11101 aattagtaaa tgccgttgct gagcaaatga aagctgcaac atctatcgtt gttgtagacg
    11161 ctcgtggttt gacagtagaa caagatacag ttcttcgtcg taacttgcgt ggtgcagaag
    11221 ttgagtacaa agttatcaaa aactcaatct tgcgtcgtgc tgctgagcaa gctggtcttg
    11281 aaggtcttgc agaattgttt gtaggtccat ctgcagttgc attctcaaac gatgcagttg
    11341 ctccagctaa aacaatttac gatttcgcga aaactgctga tgctcttgaa atcaaaggtg
    11401 gagctgtaga aggtaaagtt tcttctaaag aagaaatcga agcacttgct acattgccaa
    11461 accgcgaagg catgctttct atgttgcttt ctgtacttca agcgccagtt cgcaacgttg
    11521 catacgctgt caaagctgtt gcagaaaaag aagacgcagc ttaatgcgtc agagcgtagc
    11581 tgcttagtgc tacaaactat ttaaaaacct aaattggagg aaaatcacaa tggcattgaa
    11641 cattgaaaac attattgctg aaattaaaga agctactatc cttgagctta acgaccttgt
    11701 taaagctatc gaagaagaat ttggtgtaac tgcggctgct cctgtagctg ttgctgcagc
    11761 tggtggtgct gctgaagaag ctaaagattc attcgacgtt gaattgacat ctgctggcga
    11821 caaaaaagtt ggcgttatca aagttgtacg tgaaatcact ggtcttggtc ttaaagaagc
    11881 taaagagctt gttgacggtg caccagctat ggttaaagaa ggcgttgcaa ctgcagaagc
    11941 tgaagaaatc aaagctaaat tggaagaagc aggcgcttca gttactctta aataagaagc
    12001 acatagcaat ttgagagcgg aagcccgatt taccagtctt ttagagctta tagcgattta
    12061 aagaaactga taatttgatt tggtttcctg ccaaaaatcc tgccaaaaaa tctttggcag
    12121 gatttttgtt tttatataaa tatactgtgc agaattgcta ttcttcaaca tttgtatttg
    12181 tagaaatata tttttatgtg agcgagaaca tttcaataag tgttctcgct ttttttattt
    12241 tcaggaggaa aatcatgcaa aagaatgaac agtcatcacg acaaattgtg atgtgtcatc
    12301 tcatggctat catgggaatc gatattgaga aagcgacatg gatagttggt gagatggaag
    12361 agtctggctt aatccagttt gatgacatgg ggaatgttgg tctgttagtg ctggagggac
    12421 aatcatgaaa cgtatcaccg caaatcacta tcaaacgtca gagcgttatt ataagctccc
    12481 taaactctta tttgagagcg aacgctacaa ggatttgaaa ctagaagtta aggttgctta
    12541 tgctgttcta aaagaccgtt tggaattgtc attaagtaga gggtggatag atgaagatgg
    12601 agctatttat ttggtctatt ccaactccaa actcatggca ctacttggct gttccaagtc
    12661 aaaattattg acgattaaga aaaccttacg agagtatggt ttgatagatg aagtccaaca
    12721 atcttccagt gaaaaaggac gcttggccaa taagatttac ttgggggagt tggaacatga
    12781 acctatccca gtctcaaatt cagacggggg tggtgttcaa aaaacactag gggggtatca
    12841 aaatcagccg gggccagtct taacttcagc cactagtgag actgaagtta gtgagactga
    12901 taggagtgaa actaaagaga gtgagtcagt cattgaggac gaggaggaga aagaaagtct
    12961 aacaagtaaa aaatgtgaca atgacaattt tcaacgtaaa gtagaccgag ttacaagata
    13021 cgacagagat tacatttggg gcttggtaca tgatcagttg agacaagtcg gtctatcaca
    13081 ggctgctagt gattatgtca tgatttattt tgatcatcgg tatcagtacg ctttagagaa
    13141 tatgaggttt gcggacagag cagaaacgat agcggaatac gtctttaatg gcgtcctatc
    13201 cgaatggacc aaggtccaac gcttaaaaga actaaaaggg ggtgagtaag atgttttggt
    13261 ggatattatt aggtatttgg ggattaggaa tgatttggtt catttttgaa cttatcactg
    13321 ccccagaaat ggaagatcat tgttaagcaa ggacgttacg aaagaagtaa ggtccttttt
    13381 aattttgtca gaaaggaatg agagacatga agtttttaga tttatttgca ggaattggag
    13441 gctttcgact ggggttaact cgtcagggcc atgagtgtat tggcttttgt gagattgaca
    13501 agtttgcgag gaaatcttac aaggccatct atgagaccaa aggagaaata gaatttcatg
    13561 atattagaca agtcacagat caggacttta gacaacttag agggcaagtg gacatcatct
    13621 gtgggggatt cccttgccag gcattttcac tcgcaggcag acgattggga tttgaggata
    13681 ctaggggaac tttgttcttc gagattgctc gagcggccaa acagatccaa ccacgttttt
    13741 tattcctcga aaatgtcaag ggcttactca gtcacgacaa gggagagaca tttcgaacaa
    13801 tcctcgccac attggatgag ttggggtatg atgctgaatg gcaggtgctt aacagtaaag
    13861 atttccaagt gccgcaaaac cgtgaaagaa tttttattat cggatattct agaagatacc
    13921 gtccccgatt cctatttcct ctcagaggag aaaacagctc agctagtctt gaacgattag
    13981 gtaatgttaa tccgtcaggc aaagggatga atggagaagt ctatttatca cgtgggttag
    14041 caccaacctt aacaagagga aaaggtgaag gaactaaaat tgccattcca attttaaccc
    14101 ctgataggct agaaaaacgc caacatggga gacgctttaa agggaacgat gatccaatgt
    14161 ttactttaac tagccaagat cgacatggtg tagttgtcgc aggaacctta ccaacaacgt
    14221 ttgtgcagac gggacgagtt tatgaccttt cagggctttc tccaacgttg accacgatgc
    14281 aaggagggga taaagttcct aagattctct gccgtgaaga agcgccgcat ttgaaaatta
    14341 gggaggcgac caaattaggc tatgccaagg caatagtggg agattctgtc aaccttgctt
    14401 acccagagtc taccaaacgt agaggtcgag tgggaaaggg gatttcaaat accttaacca
    14461 cttctgacaa tatgggagtg gtagttgctg ctttggaata ccgtaaggac aagtggtatg
    14521 aagtgactgg aataattcta gatggaaaac tgtatcggtt gagaatcaga cgcctaacac
    14581 ctagagagtg ttttagactt caggggtttc ctgattgggc ttatgacaga gctgagaggg
    14641 tatccagtaa aagtcagttg tataaacaag caggcaatag cgtgaccgtc actgttatcg
    14701 aggccattgc tagagaattt agaaagattg aagaggaaga aaaacatgaa attattacat
    14761 aataaaagta ttaggaactg cacggagcta gaagaagcca tacatcaagc agaagtggag
    14821 agattttcgg aaatgattgc ttctttaccc aattatgatt gtgacattga tgtcactttt
    14881 gaagatgact accacaaaga aatgaattat ccattagctt atgagtccaa cttacaccgt
    14941 atttttgagt ttattgaaac acaagacatc aaaaatggtg tggatactta tctaacggat
    15001 gagaacaatc tcgcctttag ggcatatggg caaggctatt cttggaatga taagaatgat
    15061 gtcgtcacca cattaataac agtgaagtac tttggtgaag gcaggtcgcc tattgatatg
    15121 agtaaggtgt ttaccccact aactcaagca ttagagaagg agctatctgt gtaggaggaa
    15181 acgatgttag aaatctattt aagtcgaaac accagtcgga atcaaaaact cctgtctttt
    15241 tgtgactcgc atggtatttc ctactcctgt aaagaagtga gtcatctatc acgtgaggaa
    15301 ttactgaggt tgtttaccaa aagcagtgat tgttttacgc tcttatcccc ctcgttacaa
    15361 cgatttaaag gtcatagaga gatgaaattg agtgagttag tgacggtggt tctacggaaa
    15421 cctgaccaga atcttcgtct cccaattgtg gtttgtgagg acaaagtgta tcccgatatg
    15481 agtttagaag aagcaaggac ctttcttccg agaagtcaaa aagtggtttc ctttcgtgaa
    15541 catcttttta aggatctggt gacataagga ggagttatga acgatcgttt ttgggaaaat
    15601 ttggaaatta tcgttatgga aaaaggactg tcatgggctg accttgctcg acagatgttt
    15661 aagggccaat acgtctaccc tagtgagttt aaccgtctct accaaacctt tcgtcactac
    15721 aaatctcatc gtctcatgcc acaaggcaaa tgggtggaga aaatagtgac tgtcttagag
    15781 attgactatg aagacttgtt taggagatag tgatgaaacg actattagtg atgtacggag
    15841 ccattcatgt caatgtactc ctagtgagtt tgtacctggt tggttggcta aatggggcat
    15901 ggttacctgt tttacaagtg acatttttag ccctgctatt gtggggttgg aaaaggttta
    15961 agataccgaa aagaaaccta tccttgaagg agagagggct ttggttactt ggtagtctag
    16021 gtgtcatggt aagtattgtt tttctcctta atgccagtgt tgtggaagaa gtcttttata
    16081 gagaggtgtt gtggggagtc ttgcctcaac cagtggttca agttttgtta acgagttccc
    16141 tttttgcttt agctcatcac ccatccagtc tattcacttg ggtactttat gggagtttag
    16201 gtctcacact tggtgtggct agagggcaaa cagactgctt gagctcaact ctcgttcacc
    16261 tgtcttggaa tggaatcgtc tttttcctat ctttattgtg ataccaaaat caagggtgct
    16321 ttcgtatcat gaaagcaccc tattgttttg ataagggaat cacacaaagg aggaaatgat
    16381 gtcatccgaa caacaggaac gccaagctat tcaatatgcg gaacgtagca ctatgtttac
    16441 ggtaaaggtt cttctcaaac tcttagagtg gtcagctaga cacgccctag cacaagactc
    16501 ggcttataaa gttggggttc aaaagttaga agaactcctt caaagtccat atgccattga
    16561 gtcgctgaat atctcaaaag acattttgga taaaccagtt gatgtcggga aattcaagga
    16621 attggtggaa tcagaaaacc ttcctattgc cattagttgg caaggagatt accttcattt
    16681 ctatgctaag gataaatcgc tcttagacaa gcacttagat gagttgcttc aaaagctcgt
    16741 ttctaatcca gaaaaactga aagggctaac tatggataaa acccttgatg aggaaatcgc
    16801 acaagccaag gaacagattg tgatgtcaga accctctgct gtgaaaacaa aggaggtcat
    16861 tctctaatgg tctcagggaa aaaagttttt atctttggta ttttagggct tgctcttggc
    16921 tatttctgcc atcggctagt cttgctttac gatagtctac ctaatcaacc acccttggaa
    16981 cgccttgcct atctcttagg agagggacag aatcaggtct taaatccctt gtggaatggc
    17041 aactttacag gtaaatcagt tttgggcttt tgctttggat ttgtgacgat gggcctagtc
    17101 tatctttatg tttcaactgg tcaaaaggtt taccgagaag gggcggagta tggctctgcc
    17161 cgttttggaa acagtcacga acgcaaagcc tttctcagta agaatccttt caatgacact
    17221 attttgtcac gaaacgttag gctaaccctg ttagaaaaga aagctcccca atttgaccga
    17281 aacaagaacc ttgtggtcat tggtgggtct ggtagcggga agacctttcg gtttgtcaaa
    17341 cccaatctga ttcagctcaa ctgttccaat attgtcgttg accctaagga tcacttagct
    17401 gaaaagacag ggaagctttt tttagagcat ggctatcagg tcaagatctt agatcttgta
    17461 aacatgacca actcagatgg ttttaatcct tttcgctatg tggaaacgga gaatgatttg
    17521 aaccgtatgc ttacggtcta tttcaataat accaaaggca atggcagtcg cagtgatccc
    17581 ttttgggatg aggcgtccat gaccttagtc cgtgctattt cctcttactt ggtggatttt
    17641 tacaatcctc caggcagtac caaagaagaa gcagacagtc gccgtaagcg aggccgctac
    17701 ccagcctttt cagaaattgg aaaactcatc aagctcttat ccaaaggaga aaatcaagat
    17761 aagagtgtct tagaagtgat gtttgagatc tatgccaaga catatgggac agaaaacttc
    17821 actatgcgta actgggcaga cttccaaaac tacaaggata agaccttaga ttcggtaatt
    17881 gccgtcacaa cagctaagtt cgccctcttt aatatccaat ccgtcattga tttaactaag
    17941 cgtgacactt tggacttgaa aacatgggga acgcagaaaa ccatggtcta tctcgttatt
    18001 ccagataatg acaccacctt tcgctttctc tcagcccttt ttttctccac cgtcttttcc
    18061 accttaacga gacaagctga tgtggacttt aagggacaac tgcctatcca cgtcagaagt
    18121 tacttggatg agtttgctaa tgtcggtgaa attccagact ttgcggaaca aacctcaaca
    18181 gttcgctcac ggaacatgag tctcgtaccc attcttcaaa acattgccca acttcaaggg
    18241 ctctataagg agaaggaggc ttggaaaact attctaggaa actgtgatag cttgctttat
    18301 cttggaggca atgatgaaga gaccttcaag ttcatgagtg gtctcttagg caaacaaacc
    18361 attgatgtga gaagtaccag tcggtcgtat ggccaaacag ggtctgggtc aacttcccat
    18421 caaaaaatcg caagggatct cataacccct gatgaagtcg gaaacatgaa acgtgatgag
    18481 tgcttggtga gaattgcagg ggttcctgtt tttaaggaga aaaagttctt ccccttgaaa
    18541 cacaagaact ggaaatactt agcggacaag gagtcagatg aacgttggtg gcattaccac
    18601 attgaccccc tcaaaacaga ggaagttccg tttgaaccct cagaccacaa ggttagggat
    18661 ctaagcaaag aaagcacact acactaatag aaaagaggaa tcgtatgaac caaaaattta
    18721 caggctttgt ttatggcgtg gacgccagtt ccatgtttgc tcaagccatg gtgctcttac
    18781 aaaaaggaat ggttgcgaca ggcgcctttc ttgtcgtcat gggtattata aacctgtcaa
    18841 ccaatatcaa ggatggtgga cctggtgtcc gcaatgccat tttagaaatt gtgggtggtg
    18901 taatggtagg tgccgctggt gcctttatca cccaaattac catttaggag ggctaggtat
    18961 gacatgaaca acacattacc ttcagctttt gtctttctag cctcggagaa aatttcgagc
    19021 gatagccttt ttgaaggctt taacgtggac ttggaatcga cggccaactt ggtcaaatcc
    19081 cttgcggatt ataacccaac cgtgtggtct tatatgtcag ctatcacaaa aggagtgatg
    19141 cagcccttgg gagtggctat tttagccgct gtgttagtcc ttgagttttc taagatggct
    19201 aagaaaatcg ccaactcagg tggtgccatg acctttgaag ccattgctcc tatgattgtc
    19261 tcttatatca tggtggctgt ggtcattaca aacaccactg ttattgtaga agctatctta
    19321 gctgttgctt ctcacattat tgaaggcgta gctggtgtcg tttctcatgg gggaacgact
    19381 tatgagacca tttcaggact taaagggtca ggaattattg gaaaactcat tgttggcttt
    19441 tttgccattc tgatatggtt agtgcggttg gttagtgtga tggtggtgaa tctcctcatt
    19501 accattcgct ttatccaact ttacctcatg attccatttg cgcctctaac gattccgacc
    19561 ttcctcagtg atgactggcg aagtgttggg attggctacc tgaaaaacat catggtctat
    19621 gctcttcaag gggtcttgat tttcttaatc atctcccttg ttcccctctt tgaatcagtt
    19681 gggaaattgg ctctctcaaa tggtgcagga gtgatggaga cgctagcgac tgcctttggt
    19741 ggtttagttc aggctatttt attaatcatt gccttggtgg gcagtcaacg gactgccaga
    19801 agtatcctag gcatgtaagg aggattggga aggacgttcc tcccaatctt ttttgatact
    19861 catattagat tggagtctta tgaatacacg tgtttttaag gacattacaa aagttcaaca
    19921 cagggcttgg ctgggcttta ccacacgaca agttattttt gtcttaccag ccgttgctat
    19981 taccatcctg attttagggt taaacctctt ttattggcaa tttggggatt ggtttgtcta
    20041 cggacttatc tttaccttta ccattcctct tatgcttttt ggggtctatc ggcctaatga
    20101 cttacctttt gaaacatatc ttaattatag atggcattat gaaatgacca taccagaccg
    20161 tacactaact ggacagaaag gaatacaacg tgaaaaaaac aaatcgctca atgaaaccaa
    20221 agacctcttc taagtacaag aagacacgta aaccaaaaga agaagtgcta ccaacaactg
    20281 ttaatacgct tctttaccaa ggcctttttc ctaatggtct catgcaggtt accccagatt
    20341 atttttccca gtcctttctt ttaggggatg tcaattacca aacggtggga cttgaagata
    20401 agggagcgat tatggaaacc tattcagact tgattaacag tttggatgac aagaccaatt
    20461 tccaacttac tatttttaac cagagggtca acttggataa gtttagaaag ggtgtcttgt
    20521 atcccttaca tgaggatggc tacgatacct atcgggaaga actcaatcgt atcatggaga
    20581 ataacttaga agctggagaa aataactttt cagctgttaa attcatctct tttgggaaat
    20641 cagaccaaaa tccgaaactt gcttatcgct ccctgtctca gattggggaa tacttcaaga
    20701 gtggtttttc tgaaattgat gcgaacttta ccctcctcag tggagaaagc cgtgtgaatc
    20761 acttggctga tatgttgcga ggggaaaatc atttgccctt tacttatcaa gacctggtgc
    20821 gttcaggaca aacaaccaag cactttatta ccccaaccag tttatctttc aaacataaga
    20881 attatgtaga gattgacgat agactgcttc agattgtcta tgttcgtgac tatgggatgg
    20941 agttgggaga taagttctta cgagaactca tgcagtcgga cttggaagtg atgattagtc
    21001 ttcatgccaa aggagcagcc aagtcagaag ccatgaccaa gctccgcacc aagaagactt
    21061 tgatggaatc gcaaaaaatt ggggaacaac aaaagatggc acgatctggc gtttatcttg
    21121 aaaaggttag tcaagttcta gaaagtaaca ttgatgaagc cgatgagttg attaaaacca
    21181 tgacacaaac aggcgacaag ctctttgaca ccctcttttt gattggggtc tttgcggagg
    21241 acgaagacca gttgaaacac tcccttgata ttatcaaaca agtggcaggt tctaatgacc
    21301 ttgtgattga taatctgacc tatatgcaag aagctgcctt taatagcttg ttgccttttg
    21361 ggaagaacta ccttgagggt gtgtctcggt ctcttttgac ctcaaacatt gccgttaact
    21421 ccccgtggac gtctgtagac ctacaagata agggagggaa attctatggg ataaaccaga
    21481 tttcaagtaa catcatcacc attgaccgtg ggaaactcaa taccccatca ggtcttattt
    21541 tagggacatc aggtgctggt aaagggatgg caactaagca tgaaatcatc tcaaccaagt
    21601 taaaagaagc agatactgat actgaagtca tcattgtaga tcctgaaaat gagtacagta
    21661 tcattggtca agcctttggt ggggagagca ttgatattgc gcctgactct accactttct
    21721 taaacgtttt agacttatcc gatgacaata tggatgaaga ccctattaag gtcaaatctg
    21781 agtttcttct ctcttggatt gggaaactct tagaccgaaa aatggatggt cgagaaaagt
    21841 ccctgattga ccgtgtgaca cggctcacct ataagcattt tgagacacca tctctcgtgg
    21901 aatgggtctt tgttctctcc aaacagcctg aacaagaagc caaggactta gctcttgata
    21961 tggagcttta tgtggaaggc tcactcgata ttttctcaca tcgcaccaac atcaaaaccg
    22021 atagccattt cctcatttac aatgtcaaaa aattaggaga tgaattgaag cagattgccc
    22081 tcatggtcat ctttgaccag atttggaatc gtgtggtaaa aaaccaaaaa ctggggagga
    22141 agacttggat ttactttgat gaaatgcagc ttctgttgtt ggataagtac gcttctgatt
    22201 tcttcttcaa attatggagc cgggtccgta agtatggggc cattcccaca ggcattactc
    22261 aaaacgtaga aaccttactt cttgatgcca acggcagacg tattatcgct aatagcgagt
    22321 tcatgatact tctaaaacaa gctaaaagtg acagagaaga gttggttcat cttttgggct
    22381 tatctaaaga acttgagaaa tacttggtta atccagaaaa gggagcggga ttgattaagg
    22441 caggctcaac ggttgttccc tttagaaata aaatcccact tcaaacccaa ctctttgaca
    22501 tcatgagtac cgatccagaa aagatgaggg gtgaatcatg acaagagaac aacagaacgt
    22561 caaggttgcc cgtaaaacct ttcagagtag tttaaaggct agtcgtatcc attaccgtag
    22621 ggagaagaag gggttaaaac gctcacttcc taaacgacgc tttatcatgc gccgagctga
    22681 gaaagctgaa acaagggaac aacgtcaggc tctgaagcaa acctatcagg aggaaaaaga
    22741 cctagcgaca gataccttta aggaagcgat tgcctatgtg tctcccagat ggctaaaaag
    22801 taaggaaatt aagaagtatc ggcttcctca agccagacag cgcctagtag tagctcgaaa
    22861 acacttggca gaggtcaaga aagccgaaaa agaggaggct gttacctcta aggttaccga
    22921 tcagaaaaag ccaacagaat caaaaacgtc acggtttcag tttcaaaaag aaaaacctct
    22981 tgaacgcctt caggcagaaa aagaggtgaa atcagctaag cgtgacgtga aacaactgaa
    23041 aaaagcacat cagtttaaga acccctcgac caaggtcaaa cgagggttac gctatgtcac
    23101 ttcagaatca ctggatgtag tcgctcaaga tgatgacttg gagggaatta gaaccctaaa
    23161 ggagtctgtg attaaaggaa gacgctatgg gaaatttact tatcagtcag gaaaactcct
    23221 tgtcaaaagt ggtcagacag gtcttcggtt tactaagacg aaagccgatc atagtaagga
    23281 gcggtatcag aactttaaaa aggggaaagg gttcacccga cagaagccct taaaaccaag
    23341 aagacgttac cagacctttc tcaaacaagc tagaaaacag agtgtgtcag gaataacaaa
    23401 ggttattcaa gcgattaaga atagcctgac cttcttttca tcgattgccc ttaatcctat
    23461 gacttgggtc gtgtcaggcc ttttgttttt cctgcttttg atgatgagtt ttgtgatagg
    23521 aatttcagga actactctca ttcaacagga tgagagtgaa ctgacaaaag cctatacgca
    23581 catgacgtgg gaagatgcgg aaaacacccg aaccaacccc actggcatta cctactatac
    23641 caagattgat gacgtcatgg gctttatgaa tctcaagtat caagattatg ctttagaaga
    23701 aatcatggaa gaaggggata aaacctatca agcctatttg agtcaacttt ggcaagactt
    23761 aaacggtagg gattctttaa aatccatgct tgagttaagt aaggagtctg cctataagct
    23821 ctct
//
LOCUS       DASFQD010000022        23156 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.022, whole genome shotgun sequence.
ACCESSION   DASFQD010000022 DASFQD010000000
VERSION     DASFQD010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 23156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23156
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.022"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(81..770)
                     /locus_tag="U1021_000675"
     CDS             complement(81..770)
                     /locus_tag="U1021_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEM4711244.1"
                     /translation="MAKKILIAGKERNLSHFVSMELQKKDYLVDYASTGKEAMSLAHE
                     TDFDLILMSFQLSDMSSKELATELLAIKPATVMIVVVEPTEVSQYGEEVLSYAVSYVV
                     KPFVISDLVEQISAIFRGRDFIDNNCKQVHMHAAYRDLKVDFQNRTVTRGDELINLTR
                     REYDLLATLMNSPEPVSREQLLERVWKYEAASETNVVDVYIRYLRGKLDLPHQDSYIK
                     TVRGVGYAMRD"
     gene            complement(852..2279)
                     /gene="gndA"
                     /locus_tag="U1021_000676"
     CDS             complement(852..2279)
                     /gene="gndA"
                     /locus_tag="U1021_000676"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HEM4711245.1"
                     /translation="MTKANFGVVGMAVMGRNLALNVESRGCSVAIYNRSADKTEDVVA
                     SNPGKNLVPSYDVESFVASIEKPRRIMLMVQAGPGTDATIQALLPHLDEGDILIDGGN
                     TFYEDTIRRSKELANSGINFIGTGVSGGEKGALEGPSIMPGGQKEAYELVADVLEEIS
                     AKAPEDGAPCVTYIGPDGAGHYVKMVHNGIEYGDMQLIAESYDLMQHLLGLSVDEMAD
                     IFTEWNKGELDSYLIEITADILKRKDDQGQDGPIVDYILDAAGNKGTGKWTSQSSLDL
                     GVPLSLITESVFARYISTYKDERVAASKVLPKPAPFAYEGDKAELVEKIRQALYFSKI
                     MSYAQGFAQLRVASKENNWNLPFGEIAKIWRAGCIIRARFLQKITDAYGRDEDLANLL
                     LDEYFLDVTAKYQQAVRDVVALAVQAGVPVPTFSAAITYFDSYRAENLPANLIQAQRD
                     YFGAHTYNRKDKEGIFHYDWYSESK"
     gene            complement(2367..2933)
                     /locus_tag="U1021_000677"
     CDS             complement(2367..2933)
                     /locus_tag="U1021_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEM4711246.1"
                     /translation="MFHIYDIQKNPDGISFDKTLDLQEELQARNGEVLGLSPVQVTGN
                     IRFESGFFFLDYQMTYDITLASSRSLKPVVLHEVQNVNELFVANEAVLKEQDLIDEDM
                     VLVVEDDHIVLVVEDDHIVLDESVADNILLAIPIKVLTPEEEAGQELPSGQAWALMTE
                     EDFQQKAQEKKEANSPFAQLQGLFDSEE"
     gene            complement(2942..3859)
                     /gene="trxB"
                     /locus_tag="U1021_000678"
     CDS             complement(2942..3859)
                     /gene="trxB"
                     /locus_tag="U1021_000678"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEM4711247.1"
                     /translation="MYDTVVIGAGPAGMTAALYAGRSNLKVALLERGIYGGQMNNTAE
                     IENYPGYDHISGPALAEKMFEPLEKFGVDHIFGTLVRIEEEGQIKKVITEDGVLETKT
                     VVLAMGAKHRLLGIPGEDTYNSRGVSYCAVCDGAFFRGQKLLVVGGGDSAVEEALFLT
                     QFAESVTIVHRRDQLRAQKVIQDRAFANEKINFIWDSVVEEIKGDDLRVQSVVIKNVK
                     TEEVSELDFGGVFIYVGLDPMTDSVADLGITDEAGWVITNEKMETTQSGIYAIGDIRQ
                     NQLRQIATAVGNGAVAGQEVYNYITELAE"
     gene            complement(3873..4109)
                     /locus_tag="U1021_000679"
     CDS             complement(3873..4109)
                     /locus_tag="U1021_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4059 family protein"
                     /protein_id="HEM4711248.1"
                     /translation="MLQNILSFYLQGLLIASLLIITSSLVWFIWRATKGVDKTLQERQ
                     DFLFDFLFDLLMINVMTIPIAAFGVVGILLMFKA"
     gene            complement(4127..5470)
                     /locus_tag="U1021_000680"
     CDS             complement(4127..5470)
                     /locus_tag="U1021_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007517532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4711249.1"
                     /translation="MKFTDMKLKPYIQEALKEINFVQPTEVQEKLIPVVLSGRDLIGE
                     SKTGSGKTHTFLIPIFQKLNEELDQVQAVITAPSRELATQVYQAARQLASHSDIEVRV
                     TNYVGGTDKNRQIDKLQASQPHIVVGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLD
                     MGFLETVDKIAGSLPKDLQFMVFSATIPQKLQPFLKKYLSNPVMEQIKTHTVISDTIE
                     NWLISTKGRDRNAQILEVTKLMQPYLAMIFVNTKTRADELHSYLTANGLRVAKIHGDI
                     PPRERKRMMNQVKNLDYQYIVATDLAARGIDIEGVSHVINDTIPQDLSFFVHRVGRTG
                     RNGLSGIAITLYQPSDDADIRELEKLNIKFLPKEMKNGEFVDTYDRDRRANREKSREK
                     LDLEMIGLVKKKKKKVKPGYKKKIQWAVDEKRRKTKRVEARAKGRAERKAKRQTF"
     gene            complement(5550..6383)
                     /locus_tag="U1021_000681"
     CDS             complement(5550..6383)
                     /locus_tag="U1021_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711250.1"
                     /translation="MEQFNQEQLYGVVIQTMTAASQLPMVKVNREEFLKTRFKDSPYL
                     DKIIADGPTAVFTTKALRKEAEKIINDMTTKTSLISFAAGLPGNPFTAVAAGTADIAQ
                     YFGFALNLSQQIAYLFGEDELFVGEGKEISEEVQIRIIAYIGVMFGAGGSAVLLNKVS
                     KTVGANIGKKVAMQALTKTTWYPLVKKVAAVIGVKITKKTVEKTIANAVPILGGLISG
                     GLTYFTFQSMGGMLADTFVKKINGDFDGELELTEAFKASLEEEKELGIIEAEFTEASE
                     S"
     gene            complement(6476..7474)
                     /locus_tag="U1021_000682"
     CDS             complement(6476..7474)
                     /locus_tag="U1021_000682"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEM4711251.1"
                     /translation="MQFALMSGLVAFLATVLLIPRFITFYQAKRIEGQQMHEDVKQHQ
                     FKAGTPTMGGTVFLVVAILVSLLFATAFQLLTGGVLAILFILALYGVVGFLDDFLKIF
                     RKINEGLNPKQKLALQILGGIVFYFVHVRGAGGGELNVFGHMVHLGVLYFPFVLFWLV
                     GFSNAVNLTDGIDGLASISVVISLLAYSVIAFNEQKFDILLVCVTMIGGLLGFFVYNR
                     KPAKIFMGDVGSLALGGMLATISIALRQEWTLLLIGLVYVIETSSVMLQVSYFKYTKK
                     RFGEGRRIFRMTPFHHHLELGGLTGKAEKWSEWKVDFFLWSVGLIMSLITLAILYL"
     gene            complement(7476..9725)
                     /locus_tag="U1021_000683"
     CDS             complement(7476..9725)
                     /locus_tag="U1021_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HEM4711252.1"
                     /translation="MPRRNNKLLRYVLKKRYIPSKNRRRVGQSLLLLTVFVFFLFLIN
                     FAYIIGTDSKFGVDLSERADAVHQREVTVQAKRGTIYDRTGIPIAEDSTTYTVYSIID
                     TEYVSELKKVLYVQSSQFSKVAEIFKKHLGMETDYVMEQLNQPELKQVYFGTLGKNIS
                     YSTMSSIQEEMKAAGIEGIAFDASPGRMYSNGNFASIFVGLANPVENKDGSYSLQGVS
                     GLEYYLNDILAGQDGKVIYEKDSQGRVLPGTEKVETETVNGQDVYTTISADLQRSLET
                     NMNTFFDNAKGRYANATLVSAKTGEILATTQRPSYDSDTKEGLGQEGLLERSLLYQEA
                     FEPGSTMKVLTVASAIDNGTFDPNAYYTNNEYVIADAKINDWTLNAGYSAVTLNYAQG
                     FSLSSNVGMTLLQQQMGDEKWLNYLTKFRFGYPTRFGMGDEAPGMVPEDNIVSIAMST
                     FGQGISANQAQMLRSFTSIANNGIMLEPKFISALYNPNTDTARVSSKEEVGNPVSEQA
                     ADDTLRYMINVGTDPVYGTLYSHDLQGPAIQVDGYDIAVKSGSAEIASEDGQGYIKGA
                     YTNSVVAMIPAEDPEFIMYVTIRQPEVLNVLSWRDIVSPTLKEAMLLKDNLNLDSPAP
                     ALTRVANETEYQLPDRIGKAPGESAEELRRQLVQPVILGNGAEIKKVSVEKGSNVIAN
                     QQVLLLTNKFEEMPDLYAITKENMDIFAEWTGIEVTYKGTGSKVVDQSVEVGTALNKT
                     EKITITLGD"
     gene            complement(9725..10048)
                     /gene="ftsL"
                     /locus_tag="U1021_000684"
     CDS             complement(9725..10048)
                     /gene="ftsL"
                     /locus_tag="U1021_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HEM4711253.1"
                     /translation="MLQEKRREATMRVIGDKIRTFTRVEKAFYSSIVLSGLALAIGII
                     FMQTRLLQLQSGMAKVNQDISQKQIEINDAKQAVNELTRSARLMEIAEKAGLTFNNDN
                     IGVAE"
     gene            complement(10059..11009)
                     /gene="rsmH"
                     /locus_tag="U1021_000685"
     CDS             complement(10059..11009)
                     /gene="rsmH"
                     /locus_tag="U1021_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016466808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEM4711254.1"
                     /translation="MSKEFNHTTVLLHETVDMLDIKPNGIYVDATLGGAGHSEYLLSQ
                     LTDGGHLYAFDQDQTAIDYAHIRLASYIEKGQVTFIRDNFRNLKTRLAELGVTEIDGI
                     CYDLGVSSPQLDERQRGFSYKQDAPLDMRMNREGHLTAYDVVNTYDYHDLVRIFFKYG
                     EDKFSKQIARKIEQARAVKPIETTTELAELIKSAKPAKELKKKGHPAKQIFQAIRIEV
                     NDELGAADESIQQAIDLLALDGRISVITFHSLEDRLTKQLFKEASTIDVPKGLPFIPD
                     DLKAPLELVNRKPILPSQEELEANNRAHSAKLRVAKKVHK"
     gene            11548..11736
                     /locus_tag="U1021_000686"
     CDS             11548..11736
                     /locus_tag="U1021_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4711255.1"
                     /translation="MNRVKDYRLLLGISQLELAKAIGVSRQTINMIENNKYNPSLDLC
                     INLAKALQTDLNSLFWNE"
     gene            11752..11952
                     /locus_tag="U1021_000687"
     CDS             11752..11952
                     /locus_tag="U1021_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711256.1"
                     /translation="MKKNIRQALISTLIFIPLFVLFQLWGNSGAEILHTISQAKFWLQ
                     LLIAGTIYFLGFVYILPLFDQK"
     gene            11963..13032
                     /locus_tag="U1021_000688"
                     /pseudo
     CDS             11963..13032
                     /locus_tag="U1021_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027658.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3278 domain-containing protein"
     gene            13045..13389
                     /locus_tag="U1021_000689"
     CDS             13045..13389
                     /locus_tag="U1021_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM4711257.1"
                     /translation="MNKPFTPKQTCRFFVLFYALFSAFFIYSYMVNEPINGSFLLMLP
                     TIQIIKSYQTAEEKRYFIIQAIFALFAMTLTYSVGIWLGHVKPLILILPAGFAAAILY
                     RIYFKKEKPDER"
     gene            13379..13726
                     /locus_tag="U1021_000690"
     CDS             13379..13726
                     /locus_tag="U1021_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711258.1"
                     /translation="MNVDKPKFILTLIVLSYTAICSLYIHSYLTGDNPPIFILLFTML
                     PILNSDWQTSGPEANAFQKAIYLYHKPLLWFLFAGFALTFSIVFFAGKIQPLHAGFWG
                     MLAILLFFRQLKK"
     gene            13779..14207
                     /locus_tag="U1021_000691"
     CDS             13779..14207
                     /locus_tag="U1021_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NusG domain II-containing protein"
                     /protein_id="HEM4711259.1"
                     /translation="MTFKSILKQLKLFDYILIGFTLVLSFLPAIFTYTHLTTDTNEAK
                     TIAYVRINGEVVDQFELSKDTPHQEKTYYPNEGQYNIIEVDGERIRVKEDNSPDQIAV
                     MTSWISQPGQLSVCLPHNLLIEIKSVGGESTDEEELILPL"
     gene            complement(14515..15471)
                     /gene="menA"
                     /locus_tag="U1021_000692"
     CDS             complement(14515..15471)
                     /gene="menA"
                     /locus_tag="U1021_000692"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HEM4711260.1"
                     /translation="MNKSTKGLSLPVFLEFVEMKTKVASVFPMTLGILWSLYRYQAFN
                     WLNTLLFIIAVLSFDMCTTAINNSMDYHKAKDEAYRQESNVIGKFSLDFRQMIGIVLA
                     LLIFSLLVSLLLVWRTSWLLLPMGALCFLIGIFYTFGPIPLSRMPLGEVFSGVTMGFG
                     IFFLAVFIQQPDLLLTSQVSGQWMTLQFSWIKIIEIIFMSIPLVTLIANIMLANNTCD
                     LEEDIRNHRYTLVYYIGKKNALKLYFVLASLPWLLWIIYCLIGFLPIWALAGLIGVWP
                     AYKSLETFLKKQVKRETFIEAVKSFVLFALLYVVILALALIF"
     gene            complement(15464..16513)
                     /locus_tag="U1021_000693"
     CDS             complement(15464..16513)
                     /locus_tag="U1021_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEM4711261.1"
                     /translation="MKKIASLLFVGLLMVLLVACGGKQNESLSVVKTPLTRSESLLHT
                     VVQLSIYHENQEEAMDEAVSYIKEMESLLSTNLEGADVYRINQAAGKEAVKVDERTFE
                     VIETAIDMSKESQGLFDISIGAVSNLWKIGDEDARKPSDEEIKAALPFINYKDITLDK
                     EKKTVFIKEGMTLELGAISKGYIADKVRELFASKGITTAIINLGGNVVVMGDSPTTQN
                     GWNVGVQDPDQVRGSTVGSVPGTHDSVVTSGIYERYLEVDGVKYHHILDPKTGYPVEN
                     DISGVTVFSKTSIQGDALSTTLFLLGVEKGLDFINQIDGVEAVFIDKEQGVHLSDGLK
                     ESFELTNEEYHLVNE"
     gene            complement(16591..17070)
                     /locus_tag="U1021_000694"
     CDS             complement(16591..17070)
                     /locus_tag="U1021_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein"
                     /protein_id="HEM4711262.1"
                     /translation="MKTTKVVLKSLVVLGAVFALAACGSKQESASTSSSTKETVVLKD
                     GTYKAESSKDDYGYKIVHTLTVKDGKISESKFDYEAEDGSLKSANEEYNKKMKDKAGV
                     SAGEAIEQLNAALVEKQELSAVEVVSGATHTSEDFKKSTEALLAAAAEGKTETVKLD"
     gene            complement(17149..18138)
                     /locus_tag="U1021_000695"
     CDS             complement(17149..18138)
                     /locus_tag="U1021_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEM4711263.1"
                     /translation="MVHQIWNTYPEIERGLEEVKSIILSEMMVLHPAVTSKIVEYVEA
                     PGKYLRAGLCLLFAQMTEGKISRSKLYFAAHLEVLHLATLIHDDVIDGADKRRGVTAA
                     HQQFSNRIAIYTGDYLLAYSSRLFGKGLRLLEVSRDDLDLGNDKLMETILRGELSQLL
                     NQFDANMTMKAYLKQIQGKTAFLFGLACQLGSFVPGQSRKDSSMAFRSGQALGMAFQL
                     RDDLIDYQLDVAESGKPRLQDIQNGIYTAPLLFAMREDKSIQQQLRAYIQSPTAEGLE
                     ILTDRIFATHAIAKTEKLIVSYLEKMMNFVDRIPQLSTASMQNLVAIVFSHYF"
     gene            complement(18157..20049)
                     /locus_tag="U1021_000696"
     CDS             complement(18157..20049)
                     /locus_tag="U1021_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM4711264.1"
                     /translation="MTKNIVIVGAGYAGIAAARLLGKTFKKDQDVTVTLIDKNSFHTY
                     MTELHEVAAGRVEANAIKYDLQRIFKKYPKVQLVTDKVVEIDYDKKQVVAEHQTLDFD
                     YLLLAMGGEANDFGVKGVKEHGFTLWSIEAAERLHDHMIDACYQAMREHDEAKRRALL
                     TFTVIGAGFTGIEMIGELIDWVPILAREFKLDPKEFSLKVVEATPNILAMVTEKEQVK
                     ARKYLEKKGVELVLGDGVASVQEDSLTLSSGRQIPTYTSIWTAGVQANTDASEFGIEK
                     ARAGRLVANEFMEAKGKENVYVAGDLVYFEESEGKPTPQIVQAAEQTGHTAASNIIAA
                     IKGGEKHSYKGKYDGFMVSIGARYGVAFLMDKYHMSGFMAMAVKHMVNLLYFFTIRSF
                     FYMGSYVRHEFFDIQNKRNIFGGHTSGKGNLLWSVPMRVLYGSVWLYEGIKKAFGLFG
                     TTSWFGDQVVFPFPWLADPVSGASAAEAVSSASQAATAAAEAAEPIFGLSYAYGEAPM
                     AVLDKMPDWFATIMEFMMPNQEVALFMQKFMTVAEIGIGLALIAGAFVWIVSAATVAL
                     VVMFSLSGMFYWVNIWFIPAAISLMNGAGRAFGLDYWIMPWLGRFLDKKIYGKPKHIY
                     RIKDKK"
     gene            20232..20771
                     /locus_tag="U1021_000697"
     CDS             20232..20771
                     /locus_tag="U1021_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gx transporter family protein"
                     /protein_id="HEM4711265.1"
                     /translation="MNSKRQTLNFITMLAAQAVVISLIERLITPPFAFAPGAKLGLGN
                     LISLIAIFTLPTKDSLKVVALRLLISTFLGGTFSTFLYGFAGTTLSYVGMLSAKQLGP
                     NRVSPIGISILGGMLHNLGQLLVFATIARSFYVLNYLPILAFTGILSGLLVGLAATYL
                     LQKVGPLRHYHQLVLAEWK"
     gene            21035..22384
                     /locus_tag="U1021_000698"
     CDS             21035..22384
                     /locus_tag="U1021_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HEM4711266.1"
                     /translation="MSPFRIKLSPSQRIIISFLFVILTGSILLSLPISQISTSTASYW
                     DHLFTSVSMVCVTGLFTKAVAETYSTFGQIICMMLIQIGGLSLIGFIGLFALRGGRKM
                     NFINMATLQEALNRSDTKYFRNFLKSAFGFTLAVEAFGALLLSFHFVPEFGWARGLFT
                     SIFVAISAFCNAGFDNFGATSIMRYVDNPLINITLASLIIMGGLGFSVWFDLQTQIGQ
                     KRSLRKLGFHTKIVLGLAAIILTLGTLTTLLTEWNNPSTIGQLSFGHKLLASFFQTVT
                     MRTAGFASIDYTKAEPITLLLYIFQMMLGGAPGGTAGGIKITAFLTLVLYARSEILGL
                     PHTNFMGRTIDNLSIRKAFATFSVFLLMFIIGLFALALTDDRQPLLFLMFEVMSALAT
                     VGVTANLTPSLTMAGQAVIMALMFFGRIGPLSILASLSVRKLSKTESLQYAKSSMLV"
     gene            22396..23061
                     /locus_tag="U1021_000699"
     CDS             22396..23061
                     /locus_tag="U1021_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HEM4711267.1"
                     /translation="MPNYTIGILGLGVFGTTIAKTLHNYDCNIIAIDNHEQRINHLEP
                     ILTRGIVGDITDRSLLRAAGIGNCDAVVVATGENLESSVLAVMHSKVLGVPMVIVKVK
                     GTTAKEVLLRVGADKVISPERETGISLAKQLLHRDTTSLFELEGNVSIVEFHPPVKWI
                     GKTLGELKLRQHYKLNIIGYRSGENQELNIQLTPDYVFKSDELILAVTDHNTVDHFEE
                     LTN"
BASE COUNT         6625 a         5423 c         4244 g         6864 t
ORIGIN      
        1 acaactagaa ataaagactt gttgacgaac tcatttttga aaaatagagt tctttctcac
       61 tccctccact ctactctaaa tcaatcgcgc atggcatatc cgacaccacg aactgttttt
      121 atatatgaat cttgatgtgg caaatccagt ttaccacgta gatagcgaat atatacatcg
      181 acgacattgg tctcagaagc cgcttcatat ttccaaacac gctcaagaag ttgttctcga
      241 ctaacaggtt ctggactgtt cattaaggta gccagcagat catactctcg gcgggtcaaa
      301 ttaatcaatt catcacctcg agtcactgtt cgattttgaa aatcaacctt caaatcacga
      361 taggccgcat gcatgtgaac ctgtttacaa ttattgtcaa taaaatcacg accacgaaaa
      421 atcgcagaga tttgctccac taaatcactg atgacaaagg gcttcactac gtaggaaaca
      481 gcataagaga ggacttcttc cccatattga ctaacttctg tcggctcaac taccacaatc
      541 atgaccgtgg ctggttttat cgctaatagt tctgtagcca attccttgct ggacatgtct
      601 gaaagctgaa aactcatcag aatcaaatca aaatccgttt catgtgccaa ggacatagcc
      661 tctttccctg tcgatgcata atcaacaaga tagtcttttt tctgcaattc catggaaaca
      721 aaatgcgaga gattgcgttc tttaccagca atcaaaattt tcttagccat tgtccatcct
      781 tttctattct ttcaaatggt gtaggaatcg tattatgact agaaagaagg gcgcttccac
      841 gcccatcttt tctattttga ttcgctatac cagtcgtaat ggaagattcc ttctttatct
      901 ttacggttat aagtgtgagc accaaagtag tcacgttgtg cttgaatcaa gttcgctggc
      961 aagttttcag cacggtagct atcgaagtag gtaatagctg ctgagaatgt tggtacagga
     1021 actcctgctt gaactgccaa ggcaacaaca tcacgaactg cctgttgata cttagctgtt
     1081 acatcaagga agtactcatc caagagcaag tttgccaagt cttcatcacg tccgtaggca
     1141 tctgtgattt tttgcaagaa gcgagcgcgg atgatacaac ctgcacgcca gatttttgcg
     1201 atttcaccaa atggcaagtt ccagttgttt tcttttgatg ctacgcgcaa ctgtgcaaaa
     1261 ccttgtgcat aagacatgat ttttgagaag tacaatgctt gacggatttt ttctaccaat
     1321 tcagccttgt cgccttcgta tgcaaacgga gctggttttg gaaggacctt gcttgctgct
     1381 acacgctcat ctttgtaggt tgagatataa cgagcaaata cagattctgt aatcaatgac
     1441 aatggcacac ccaagtcaag tgatgattga cttgtccatt taccagttcc cttgttacca
     1501 gccgcatcca aaatgtaatc aacgattggt ccatcttgac cttgatcgtc tttacgtttc
     1561 aaaatatctg ctgtgatttc aatcaagtag ctatccaatt cgcctttgtt ccactcagtg
     1621 aaaatgtcag ccatttcatc cactgacaaa ccgagtaagt gttgcatgag gtcataagac
     1681 tccgcaatca attgcatatc accatactcg ataccgttgt gtaccatttt tacatagtga
     1741 ccagcaccat ctggaccgat ataagtcaca catggtgctc catcttctgg cgcttttgct
     1801 gaaatttctt ccaagacatc tgctaccaat tcgtaggctt ctttttgacc accaggcatg
     1861 atagatggac cttcaagagc tcctttttca ccaccagata cacctgtacc gatgaagtta
     1921 atgccggagt ttgccaattc tttagaacga cggatagtgt cttcgtagaa agtattccca
     1981 ccatcaatca agatgtcacc ttcatccaag tgtggtaaga gtgcttgaat ggttgcatct
     2041 gtaccaggac cagcttgaac cataagcatg atgcgacgtg gtttttcgat agatgccaca
     2101 aagctttcca catcgtaact tggtaccaag tttttacctg ggttgcttgc aacaacatct
     2161 tctgttttat cagcagagcg gttgtaaata gctactgaac agccacgtga ttcaacgtta
     2221 agcgcaaggt tgcggcccat aacggccatt cctacaacac caaaatttgc tttagtcatt
     2281 tgtttactcc tctaatttgt atccctttca ttatacaccg aaaggggaaa gttgacaaga
     2341 attttcagat aatttaacta tccaaactat tcttcactat caaacaagcc ctgcaattga
     2401 gcaaaaggac tattggcctc ttttttctct tgagcttttt gttgaaaatc ttcttcagtc
     2461 attaaagccc aagcttgacc agatggtagt tcctgtccag cttcttcttc aggtgtcaag
     2521 actttgattg gtatagccag taaaatattg tctgctacac tctcatcaag gacaatgtgg
     2581 tcatcttcta ctaccaggac aatgtggtca tcttctacta ccagtaccat atcctcatca
     2641 atcaaatctt gttctttaag aactgcttca ttggcaacaa aaagttcatt gacgttttgg
     2701 acctcatgca aaacaactgg tttcagagaa cgactggatg ccaaggtaat atcataagtc
     2761 atctgatagt ccaagaaaaa gaaacctgat tcaaagcgga tatttccagt gacttggact
     2821 ggcgacaagc ctagaacttc accatttcga gcttgcaatt cttcctgtaa atccaaggtt
     2881 ttatcaaagg agattccatc tggatttttc tgaatatcgt aaatatgaaa catgtattcc
     2941 cctattcagc tagttctgtg atgtagttat agacttcttg tccagcaact gcaccatttc
     3001 ctactgccgt tgcaatctga cgaagttgat tttgacgaat atcaccgatg gcatagatgc
     3061 ctgattgagt cgtctccatc ttttcattag tgataaccca accagcttcg tccgtaatcc
     3121 ccaaatcggc aaccgaatcc gtcatcggat ccaaaccgac atagataaag acaccaccga
     3181 agtccagttc gctgacttcc tctgttttca catttttgat aaccacgctt tgtacacgta
     3241 agtcatcacc cttgatttct tcgactacac tatcccagat gaagttaatt ttttcattgg
     3301 caaaagcgcg gtcttggatg actttttgag cacgaagctg atcacggcgg tgaacaattg
     3361 tcacagactc cgcaaattgt gttaagaaga gagcttcttc gaccgcagaa tctccaccac
     3421 cgacaaccaa gagtttttgt ccacggaaga aggcaccgtc acagactgca caatatgaga
     3481 caccacggct attgtaagta tcctcacctg gaatacctaa caaacggtgt tttgcaccca
     3541 tggctagaac gactgtcttt gtctccaaaa caccatcctc agtaatcact ttcttaattt
     3601 gtccttcttc ctcaatacgg actagggtgc caaaaatatg gtccacaccg aatttttcca
     3661 agggttcaaa cattttttca gccaaggctg gacctgaaat atggtcatag cctggatagt
     3721 tttcaatttc cgcagtatta ttcatctgac caccataaat accacgttcc aaaagagcta
     3781 cctttaaatt gctacgccct gcataaagag ctgcagtcat ccccgcagga cccgcaccaa
     3841 ttacaactgt atcgtacata tactttttcc ttctacgctt taaacattaa taagattccc
     3901 actactccaa aggctgcaat ggggattgtc atcacattaa tcatcaacaa atcaaacaag
     3961 aaatcaaaca agaaatcttg tcgttcttgc aaggttttat ccacaccctt tgtcgcacgc
     4021 cagataaacc agaccagact agaagtgata atcaacaagg aagctattag caatccttgt
     4081 aaataaaaac ttagaatgtt ttgtaacatc tttttcctcg attactttaa aaggtttgac
     4141 gcttggcttt acgttctgca cgaccctttg cacgcgcttc aactcgcttg gtcttgcgac
     4201 gtttttcatc aacagcccat tgtattttct tcttgtagcc tggtttgact tttttctttt
     4261 tcttcttgac caagccaatc atttccaaat ctagtttttc acgagatttt tcacggttag
     4321 cacggcggtc acggtcgtag gtatcgacaa attcgccatt tttcatttct tttggcaaga
     4381 atttgatatt gagtttttct agctctcgaa tatctgcatc atcgcttggc tgataaaggg
     4441 taatggcaat acctgataaa ccattacgac ctgtgcgccc cacacggtga acaaagaagg
     4501 aaaggtcttg tggaatagta tcattgatga catgactgac gccctcaata tcaatcccac
     4561 gtgctgctaa atcagttgca acaatgtact gatagtccaa gtttttcacc tggttcatca
     4621 tccgcttgcg ctcacgtgga ggaatatccc catgaatctt tgcgacacga agaccgttcg
     4681 cagtcaaata gctatgcaat tcatctgcac gtgtctttgt attgacaaaa atcatggcca
     4741 agtaaggttg catgagcttg gttacttcca agatttgagc attacggtca cgccccttgg
     4801 ttgaaatcag ccagttttca atggtatctg aaatgaccgt atgggtcttg atttgttcca
     4861 tgactggatt ggacaagtat tttttcaaaa acggttggag tttctgcgga atggtcgctg
     4921 aaaagaccat aaattgcaag tcttttggca ggctaccagc aatcttatca actgtttcta
     4981 aaaagcccat gtccaaggtc atatctgcct catccaccac aaaggttttt gctttatgga
     5041 tagcaaggtc acctgatttg accaaatcat agatacgccc tggtgtccca acaacaatgt
     5101 gaggctgact agcttgaagc ttgtcaattt gacggttctt atccgtaccg ccaacataat
     5161 tggtcacacg aacctcgatg tccgaatgac tagccaactg gcgtgccgct tgataaacct
     5221 gagtagccag ttcacgagat ggggctgtaa taacagcctg aacttggtcc aattcctcat
     5281 ttaatttttg gaaaatcggg atcaagaagg tatgggtctt acccgaacct gtttttgatt
     5341 cccctatcaa gtctcgccct gacaaaacaa ctggaatcaa tttctcctga acttctgtcg
     5401 gttggacaaa gttaatttct ttcaaagcct cctgaatata aggcttgagt ttcatatctg
     5461 taaatttcat agttccctct ttagttgtac tgccctctat tatagcacga tttaggtgga
     5521 caagcaaaaa ggacggatac ccgtcctaat caactctcac ttgcttcagt aaattctgcc
     5581 tcaataattc caagttcctt ctcttcttcc aaacttgctt taaaggcctc agtgagttct
     5641 aattcgccat caaaatcacc atttattttt ttcacaaatg tgtctgccaa catccctccc
     5701 atggactgga aggtaaaata ggtcaaacct cctgaaatta gaccacccaa aataggaact
     5761 gcattggcaa tcgtcttttc aacagtcttt ttggtaattt tcacaccaat cactgcggct
     5821 acctttttca ccaagggata ccaagttgtc ttggtcaaag cctgcatagc tactttttta
     5881 ccgatattag ctccgactgt cttggatact ttattgagaa gaactgctga accacctgct
     5941 ccaaacatga caccaatgta ggcaataatg cggatttgaa cctcttctga aatttccttc
     6001 ccttcaccaa caaataattc atcttcacca aaaagataag cgatttgttg cgacaaattc
     6061 aaggcaaaac caaaatactg agctatatca gcagtacctg ccgccaccgc tgtaaatgga
     6121 ttccccggta aaccagctgc gaaagaaatc aaagatgttt tcgtagtcat atcattaatg
     6181 attttttcag cttctttacg caaagctttt gtagtgaaga ccgccgttgg tccatccgca
     6241 ataattttat ctagataggg actatcttta aaacgagtct tcaaaaattc ttcccgattg
     6301 actttaacca taggaagttg actagcagct gtcatggttt gaataaccac tccatataac
     6361 tgttcttgat tgaattgttc catttttatc ctccaccaat tctctctcta ttttaccccc
     6421 cccccgacca tatttgtcaa ggtaaaaaaa cagcatttct gctgtttctg acattttata
     6481 gataaagaat agctagggta atcaagctca tgatgagacc gactgaccag aggaaaaaat
     6541 caactttcca ctcgctccat ttttcagctt ttccggtcaa acctccaagc tccaaatggt
     6601 gatgaaaagg agtcatacgg aagatacgac gaccttctcc aaagcgtttt ttggtgtatt
     6661 taaaatatga aacttgcaac ataacagagg acgtttcaat gacatagacc aggccgataa
     6721 ggaggagggt ccattcctga cggagggcaa ttgaaatagt tgccaacata ccaccgagag
     6781 ccaagcttcc cacatccccc atgaaaatct tcgctggttt acggttataa acaaagaaac
     6841 cgagcaagcc accaatcatg gtcacacaaa ctagaagaat atcaaatttt tgctcattga
     6901 aggcgatgac agagtaagct agaagactga taacaactga gatagaagcc aatccatcaa
     6961 taccatctgt caaattaact gcatttgaaa aaccgaccag ccagaacaga acaaatggga
     7021 aatagagaac tcccaaatgt accatgtgac caaatacatt caattctccg ccacctgctc
     7081 ctcttacgtg gacaaagtag aagacaatcc ctcctaaaat ttgtagagca agcttttgtt
     7141 taggattaag accttcattt attttacgga aaatttttaa aaagtcatcc aaaaatccta
     7201 ctacaccata aagggcaagg atgaagagga tggcaaggac accacccgtc aacagttgaa
     7261 aggccgttgc aaacaacaag ctgacaagta tcgcaacaac gagaaaaact gttcccccca
     7321 ttgttggtgt acctgcctta aactgatgtt gtttcacatc ttcgtgcatc tgttgcccct
     7381 cgatgcgttt ggcttgataa aatgtaataa atcgtgggat taagagaacg gttgctagaa
     7441 aagctaccaa tcccgacata agtgcgaatt gcatgttagt ctcctaaggt tattgttatt
     7501 ttctcggttt tattcaaagc ggtaccgacc tctacacttt ggtcgactac ttttgagccc
     7561 gttcctttat aggtcacttc gataccagtc cattcagcaa atatatccat attctctttg
     7621 gtgattgcgt acaggtctgg catttcttcg aatttatttg tcaggagtag aacctgttgg
     7681 ttggcgatta cgttacttcc tttttcgact gaaacttttt taatttcagc accgtttcca
     7741 aggataactg gttgaactaa ttgacggcga agttcctcag ccgactcgcc tggtgcctta
     7801 ccaatgcggt ctggcaattg atactctgtc tcattagcaa cccgggtcaa tgctggcgca
     7861 ggtgaatcca gattcaaatt gtctttcaac agcatcgctt ctttcagtgt aggactgaca
     7921 atgtcacgcc aagacaggac atttaatact tccggttggc gaatggtcac atacatgata
     7981 aattctgggt cctcagcagg gatcatggct actacagagt tggtataggc gcctttaatg
     8041 tacccttgac catcttcgct ggcaatttcc gccgaacctg atttgactgc aatatcatag
     8101 ccgtcaacct gaattgcagg cccctgtaaa tcatgtgagt agagtgtgcc ataaacaggg
     8161 tcagtaccga cattaatcat atagcgaagt gtatcgtcgg cagcttgttc agaaactgga
     8221 tttcccactt cttctttcga agaaactcta gctgtatctg tattaggatt ataaagagct
     8281 gagataaatt taggctctag cataatacca ttgttcgcaa tggatgtaaa actacgaagc
     8341 atctgtgctt ggtttgcaga aattccctga ccaaacgttg acatggcgat agaaacgatg
     8401 ttatcctctg gtaccattcc tggcgcctcg tcccccatac caaaacgcgt tgggtagcca
     8461 aaacggaact tagtgaggta atttagccat ttttcatctc ccatctgttg ctgcaataag
     8521 gtcatcccaa cgttactgga tagggagaag ccttgcgcat aattgagagt cacagctgaa
     8581 taacctgcat tgagggtcca gtcattgatt ttcgcgtctg caataacgta ctcattattg
     8641 gtataatatg catttggatc aaaggttcca ttatcgatag ctgacgctac tgttagcacc
     8701 ttcattgttg aaccaggctc aaaggcctct tgatataaga gtgaccgctc tagtaggcct
     8761 tcttgtccca gaccttcttt ggtatctgaa tcatagcttg gcctttgggt cgtcgccagt
     8821 atttcacccg tcttggctga aaccaaagtt gcattcgcat atcgcccttt ggcgttatca
     8881 aagaaggtat tcatattggt ttcaagagaa cgttgcagat cggctgaaat tgtcgtatag
     8941 acatcctgcc cgtttactgt ctccgtttca accttctctg tcccaggtag gacacggcct
     9001 tgactatctt tctcgtagat aacctttccg tcttgaccag ccagaatatc attcagataa
     9061 tattccaaac cactcacacc ctgtaaacta taactaccat ccttattttc aaccggatta
     9121 gctaacccga caaaaattga agcaaaattt ccattcgaat acatccgtcc tggactagcg
     9181 tcaaaggcaa tcccttcaat acctgccgcc ttcatctctt cttggattga cgacattgta
     9241 ctataggaga tattcttacc taaggtccca aagtatacct gcttcagttc aggttgattc
     9301 agctgctcca taacataatc tgtctccatt ccgagatgct ttttaaagat ttctgctact
     9361 ttgctgaact gagaagactg cacatacaaa acttttttca gttctgacac atattctgtg
     9421 tcaatgattg aatagactgt ataggtcgtt gaatcttctg caataggaat tcctgtacgg
     9481 tcgtatatcg tcccccgttt agcttgaacg gtaacttcac gctggtgtac cgcatcagct
     9541 ctctctgaca agtccacccc aaatttacta tcagtgccga taatataggc aaagttgatt
     9601 aaaaaaagaa aaaagacgaa aaccgtcaaa agaagtaggc tctgtcctac tcttcgacga
     9661 ttttttgacg gaatatatcg ttttttcaag acataccgca agagtttatt atttcttctg
     9721 ggcattattc ggctactcca atattgtcat tattaaaagt taatccagct ttttcagcaa
     9781 tttccatcaa gcgagctgaa cgtgtcaatt cattgacagc ttgctttgca tcgttaattt
     9841 caatctgttt ttggctaata tcttgattga ctttggccat gccagattga agttgcaaaa
     9901 gccgcgtttg cataaagata attcctatcg caagggctaa tccagataat acgatgcttg
     9961 aatagaaggc tttttctaca cgtgtgaagg ttctaatttt atcaccgata acccgcatag
    10021 tggcttctct acgtttttct tgcaacatag actctctcct atttatgtac tttcttagct
    10081 acacgcagtt tggctgaatg cgcgcgatta tttgcctcta attcttcttg acttggcaaa
    10141 atcggcttgc gattgaccaa ttcaagtgga gccttcaagt catctggaat aaatggcaaa
    10201 ccttttggaa catcaatcgt acttgcttct ttgaagagtt gtttggtcaa acgatcttct
    10261 aaagaatgga aagtaatcac agaaatccgg ccatccaaag ccaataagtc aatggcctgc
    10321 tggatagatt cgtctgctgc tcccaattca tcattgactt caatccgaat agcctggaaa
    10381 atctgcttag caggatgccc cttcttctta agttccttgg ctggcttggc agatttgatc
    10441 agctctgcca actcagtcgt tgtttcaatc ggcttgaccg cacgcgcctg ttcaatctta
    10501 cgagcaatct gcttggaaaa tttatcctca ccatatttga agaaaatccg caccaaatca
    10561 tggtagtcat aggtattgac cacatcataa gccgtcaaat gtccctcacg attcatccgc
    10621 atatcaagcg gagcatcttg tttgtaagaa aagccacgct gccgctcatc caactgtgga
    10681 ctagatactc ctaaatcata acaaatccca tcaatctctg ttacacctag ctccgccaag
    10741 cgagtcttga gattgcggaa attatccctg ataaaggtca cttgtccctt ttcaatgtag
    10801 gatgccaagc gaatatgggc ataatcaata gcagtctgat cctgatcaaa ggcatagaga
    10861 tgccccccat ccgtcaactg actgagtagg tactcactat gccctgctcc acccagcgtt
    10921 gcatctacat aaattccatt tggtttgatg tctaacatat ctactgtctc atgcaagaga
    10981 acagttgtgt gattaaattc cttgctcata tcttttctat tgtaccacaa aacaatacaa
    11041 aaagttgttg caaacttttt acaaaaaaac tgtcaaatat agttgacaac ttatatgaac
    11101 aggtatatac taacagtaaa gaaacatgtc acatatagtt gacatcaaca gggaggtctc
    11161 ccacattttt ttacacttgt atgtcggata taattgacaa tattttaaag aggctgggct
    11221 caagtccagc accgcttctc aaagttagtg tcaacatctc agcgcagtgg ttgattggca
    11281 gatttgttcg tgttttacac tccaaatcag gcctctacga ctgaggcgaa cagagttcgc
    11341 ttcatttcca acctccaaca gtcactactc tgactgttgg agctatgcgg gggtgggagt
    11401 gaaacagtct atccccagac tgtttcagct caacaactta aaacgaaaaa ttgttgacga
    11461 actcttctgt aaatggtcga gttctttccc actcccctca tttttagaca attgtgtcag
    11521 atataattga cacagaaagg agggcacatg aaccgtgtca aagattatcg cctactgtta
    11581 ggtatttccc agctggagct ggccaaggcc atcggcgtat ccaggcagac catcaacatg
    11641 attgaaaaca acaagtacaa tccctcgcta gacctctgta tcaacctagc caaggcttta
    11701 cagaccgatc ttaatagtct cttttggaat gaatagaaag gaagaaaaac catgaaaaag
    11761 aatatacgtc aagcccttat ctctaccctt atttttatac cgctctttgt cctctttcag
    11821 ctttggggca atagcggagc agaaatcttg cacaccatca gccaagcaaa attttggcta
    11881 caattgctga ttgctgggac catctacttc ttaggctttg tttacatctt accattgttc
    11941 gatcaaaaat aaggagctgc ttatgaaaaa agaaaccttt caagataaat taatcaaacg
    12001 attttacggt atcgcagggc ccttggatga atttcgccaa aaagaagcct tccgactagg
    12061 caatacctgc tttatcctgc tcttttgggg caccatggct ataaccctgc tggcacttgc
    12121 cctatccaaa cgctacccag aagtcgttgc ctatggctac ccaacggctc tactcctatc
    12181 cactctttcc gccagtatgt atatgacatc caagatgcgc cacagtcaag tggacagttt
    12241 agatgtagaa gaactgacta ccaaggaaca aaagaaattc aagggagcaa gtatcaaatt
    12301 cgccctctat ttcacctgtg gtatgtatat ctggaacacg ggatttgatg cctggatgga
    12361 aggactcaat ccactagacc atttatttga cctccgaaaa ttccttgcag cctgtctagt
    12421 cggtgttttc atgggaattt atatcgaaat cactcttcgt aaacgcatga aaaaggcaga
    12481 aaaactaact gtcagctctg ctattgccaa agaagaaccc aagtggatca aaaatatgat
    12541 taaacgtttt tatggtatcc gcggtccttt agacgaatac cgacgggccg aggctgatgc
    12601 tatcggcgga caagccttta tctactactt ctacttccta gctcttggaa atgccatcgc
    12661 ctacttccta gcctaccgct accctctgga ggtggctgcc tactatccaa tgatcattgc
    12721 cttcttcagt attatcctaa ttggtatcgt taatatgcgc accctccatg ctgacctgcc
    12781 tcaatatgac atggacgaac tgagcaagga cagaccctca atccactggt tttgggactg
    12841 ggagttgccc tgctatctag cctctttgct gggctggcag acctctttag cctccagctt
    12901 cccctactgg cttccatctt ccacgtaaaa tccctcctct tcggtggcat gatgggcctc
    12961 tttgccagtc tagccctgtc tgccattgcc tatctgcaaa aactggaagc agattctgtc
    13021 aagaaaaaat aaggagctga ccccatgaat aaacctttta cacccaaaca aacctgtcga
    13081 ttttttgttc tattttatgc tttattttct gccttcttca tctactctta catggtcaat
    13141 gagccgatta acggttcatt cctgctcatg ctaccgacca tccaaatcat caaatcctat
    13201 caaacagcag aagaaaaacg ctactttatc attcaagcca tctttgccct gtttgccatg
    13261 accttgacct attccgtggg catttggtta ggacatgtca aaccacttat cctcatcctt
    13321 cctgctggat ttgctgccgc tattctttat cggatttatt tcaaaaagga gaagccagat
    13381 gaacgttgac aaaccgaaat tcatactcac tttgattgtt ctctcctata cagcaatttg
    13441 tagcctgtat atacatagct acctgactgg ggacaatcca ccaattttta tcttactgtt
    13501 cactatgctt ccaatcttga atagtgactg gcagactagt ggcccagaag caaatgcttt
    13561 ccaaaaagct atctatcttt atcataaacc actgctctgg tttctctttg caggttttgc
    13621 cctaactttc tccattgtat ttttcgctgg aaaaattcag ccacttcatg ctggattttg
    13681 gggaatgtta gccatcctac tcttctttag acaattgaaa aagtagtctg catccaacat
    13741 tttacaaagt aggatttttt ctataaaata gattgtatat gacattcaaa tccattctca
    13801 aacaactcaa actatttgat tatatcttaa tcggattcac cctagtttta tcctttcttc
    13861 cagcaatttt tacctacaca catctgacta cagatactaa tgaggcaaaa acaattgcct
    13921 atgtccgcat caatggtgag gtggtcgacc aatttgaatt atcaaaggac acacctcatc
    13981 aagaaaagac ctactatccc aatgaagggc aatacaatat cattgaagtt gatggcgaac
    14041 gcattcgtgt caaggaagac aatagcccag accaaattgc cgttatgacc agctggatta
    14101 gccagccggg tcaactctcc gtctgcctgc cacataacct gttgattgaa atcaaatccg
    14161 ttggcggaga aagcactgat gaagaagaac tcattttacc actatagtct tttagtttac
    14221 ttttagtact agctccaaag gtttgggaaa tctttggagg ttggagataa agcgaacaaa
    14281 gttcgcatca aaagccgcag gcataactca atgctttctt atttctaggc attgacttga
    14341 aacagtcccc cagactgttt caatcaggca aggcgagttc aaatactcca gtggagtgtt
    14401 tgaagttgga aattaggaaa cgatgtttcc tcgctcgtcg aagtaataaa agaaaaacta
    14461 actgacgata taacaaagaa gacacagcct tatgaacgac tgtgtctttc ctttttagaa
    14521 aataagggct aaagcaagta tcaccacata tagcagcgca aagagtacaa aactctttac
    14581 tgcctcgata aaggtttccc gtttgacttg ctttttcaaa aatgtttcta gactcttata
    14641 agcaggccaa actccgatta aaccggccag tgcccaaatt ggtaagaatc ctatcagaca
    14701 gtagattatc cacagcaacc atggtaaact tgccaagaca aaatacaatt taagagcatt
    14761 tttcttgcca atatagtaaa ccagagtata acgatggttg cgaatatctt cttctaaatc
    14821 acaggtgttg ttagccaaca tgatattagc aatcaaggtt accagaggaa tggacatgaa
    14881 aataatttca attattttta tccaagaaaa ttgcaaagtc atccactgac cgctcacttg
    14941 gctggtcagt agcaaatctg gttgctgaat aaatacagca agaaagaaga tgccaaatcc
    15001 catggttact ccagagaaaa cttcacccag tggcattctc gaaagcggaa taggtccaaa
    15061 ggtatagaag ataccaatga ggaaacagag agctcccatc ggtaggagga gccaactggt
    15121 ccgccataca aggagtaatg aaaccagtag agaaaaaata agtagagcaa ggacgattcc
    15181 aatcatctga cgaaaatcta gggagaattt tccaatcaca ttgctttcct gacgataggc
    15241 ttcatccttg gccttgtggt agtccatgct attgttgatg gcagttgtac acatgtcaaa
    15301 gctaaggacg gcaataatga agaggagagt attgagccaa ttgaaagctt gatagcgata
    15361 caggctccat aaaatcccca gggtcatcgg aaaaacactg gctaccttgg tcttcatttc
    15421 aacaaattct agaaatacag gcaaactgag ccctttagtt gatttattca ttgacaagat
    15481 gatactcctc attcgttaat tcaaagcttt ctttcaagcc atcactcaga tgaacaccct
    15541 gctccttatc gatgaaaaca gcttctacac cgtcaatctg attgataaag tcaagacctt
    15601 tttccacacc tagtaagaag agagttgtgg ataaggcatc tccttggata gatgttttgg
    15661 aaaagactgt cacacctgag atatcgtttt ccacaggata tccagttttg ggatcaagga
    15721 tatggtgata tttgacaccg tccacctcta agtaacgctc ataaatacct gaggtaacaa
    15781 ccgaatcatg tgtccctggc acagaaccga ccgttgatcc acgcacttgg tctgggtctt
    15841 gaactccaac attccaacca ttttgtgtcg ttggcgaatc ccccataacc actacattcc
    15901 cacctagatt gatgatagca gtcgtaatcc ctttgctggc aaacaattcc ctaaccttat
    15961 ctgcaatgta acctttggaa atggctccta attctaaggt cattccttct ttgataaaga
    16021 cggtcttctt ctccttatct aaagtaatgt ctttataatt gataaatggc agagcagctt
    16081 tgatttcttc atcactcggc ttacgtgcat cctcatctcc aattttccac agattgctca
    16141 cagctccaat ggaaatgtca aatagcccct gactttcttt actcatgtca atagctgttt
    16201 caatcacttc aaaggtacgt tcatcaacct tgacagcttc ttttcctgct gcctgattga
    16261 tacggtagac atctgcccct tccaagtttg tggacaacag actttccatc tccttaatat
    16321 aggagacagc ttcatccatc gcttcttcct gattttcatg ataaatactc aactgcacta
    16381 ctgtgtgaag taagctttca ctacgagtca acggagtttt cacaacagat aaactttcgt
    16441 tttgtttacc accacaggca acaagcaaaa ccatcagtag gcccacgaac aatagacttg
    16501 caattttttt cactgatttt accttcccca aaaaataaga agacacagta gccaaacaag
    16561 tgcgactgtg tcttttctgt atagacttaa ttagtcaagt tttacagttt ctgtttttcc
    16621 ttcagcagct gctgcaagaa gggcttctgt actcttcttg aagtcttcag aagtatgagt
    16681 tgcacctgat acaacttcaa cagctgagag ttcttgtttc tcaaccaaag ctgcattgag
    16741 ttgttcaatt gcttcaccgg cagaaactcc agctttatct ttcatttttt tgttgtattc
    16801 ttcatttgct gatttaagac ttccgtcttc tgcttcgtag tcaaattttg actcactaat
    16861 ttttccatct ttaacagtca atgtgtgaac aattttgtag ccataatcgt ctttgcttga
    16921 ctcagcttta taagtaccat ctttcaatac tactgtttct ttagttgaag acgaagttga
    16981 agcagattct tgtttagacc cgcaagctgc gagtgcaaat accgcaccaa gaactaccaa
    17041 acttttcaac acaactttag ttgttttcat aacaatgctc cttttgttaa gtaaatagtt
    17101 ttatacttat aatgatatac ctaattagag aaaatgtcta gttatttttt aaaaataatg
    17161 actaaaaact attgccacca aattttgcat agacgcagtc gataactgtg gtattctatc
    17221 tacaaaattc atcatttttt ccaaatagct aacaatcagt ttctctgttt tggcaatagc
    17281 atgcgttgca aaaatcctat ctgtaaggat ttccaaccct tctgccgtag gggattgaat
    17341 ataagcccgc aattgctgct ggatagactt gtcttctcgc atggcaaaaa gtagcggtgc
    17401 agtatagata ccgttttgaa tatcttgcaa tctaggtttt cctgattctg ctacatccag
    17461 ctgatagtca attaagtcat ctcgtagctg aaatgccatg ccaagtgctt gcccagaccg
    17521 aaaagccatg ctactgtctt tcctagattg gcctggtaca aagctcccca actgacaggc
    17581 aagtccaaat agaaaagctg tttttccttg aatttgcttg agataggctt tcatagtcat
    17641 attggcatca aattgattga gtagctgaga taattcccct cgaagaattg tttccatcag
    17701 cttatcattg cccaaatcca aatcatcacg tgatacttct agcaaacgaa gcccctttcc
    17761 aaatagtcga cttgaatagg ccagaagata atcacccgtg tagatagcaa ttcgattcga
    17821 aaattgctga tgagccgccg tgactcccct ccgtttatct gcgccatcaa tcacatcgtc
    17881 atgaatcaga gtcgccagat gcaggacttc taaatgggca gcaaaatata gctttgaacg
    17941 gctaatcttt ccttccgtca tttgtgcaaa gagcagacag aggccggcac gcaggtattt
    18001 ccctggcgcc tctacatatt caacaatctt cgatgtaact gctggatgca ggaccatcat
    18061 ctcagataag atgatggatt ttacctcttc aagtcccctc tcaatctcag gataggtatt
    18121 ccaaatttga tgtaccacta actttctata tttcctttat tttttatcct tgatacggta
    18181 aatatgcttg ggctttccat aaatcttctt gtctaggaaa cgacccaacc atggcataat
    18241 ccaatagtct agaccgaagg ctctacccgc accattcata agagaaatag ctgctgggat
    18301 gaaccaaata tttacccagt agaacatgcc tgacaggctg aacataacta ccaaagcaac
    18361 ggttgccgca gatacaatcc atacaaaggc accagcaatc aaagccagac caataccgat
    18421 ttctgctact gtcataaatt tttgcataaa gagtgctact tcttggtttg gcatcataaa
    18481 ttccatgata gtagcaaacc aatcaggcat tttgtccaaa acagccatcg gtgcttcacc
    18541 ataggcatag ctcaaaccaa aaattggttc agccgcttct gccgcagcag ttgccgcttg
    18601 tgaggcactt gaaaccgcct cagcagcaga tgcaccagat actgggtcag ctaaccaagg
    18661 gaatgggaag acaacttgat ccccaaacca tgatgttgtt ccgaatagac caaaggcttt
    18721 cttgatacct tcgtagagcc atactgaacc ataaaggaca cgcattggca cagaccagag
    18781 aagatttcct ttgcctgaag tatgaccgcc aaaaatgttt cgcttattct gaatgtcaaa
    18841 gaattcatga cgaacataag aacccatgta gaagaaacta cggatggtaa agaagtagag
    18901 taggtttacc atgtgtttga cagccattgc cataaagcct gacatgtggt atttgtccat
    18961 caagaaggct acaccgtagc gtgctccaat agataccata aacccatcat atttaccttt
    19021 gtagctatgt ttttcgccac ccttgattgc tgcaataata ttacttgccg cagtatgacc
    19081 tgtctgttca gctgcttgta caatctgtgg agttggtttt ccttctgatt cttcaaagta
    19141 aaccaagtcg ccagctacat agacattttc cttgcctttc gcttccatga attcattggc
    19201 taccaaacga cctgcacgtg ctttttcaat accaaattca cttgcatccg tattggcttg
    19261 aacaccagct gtccaaatag aggtataggt aggaatttga cgacctgatg aaagtgtcaa
    19321 gctatcttct tgtacacttg ctacaccatc gccaagaacc aattcaacac cttttttctc
    19381 aaggtatttg cgagccttaa cttgctcttt ttcagtaacc atagccaaga tatttggcgt
    19441 tgcttcgaca accttgagag agaattcttt tggatccaac ttgaactcac gcgccaaaat
    19501 tggtacccag tcaatcaact caccgatcat ctcaatacct gtgaagccag caccgataac
    19561 ggtaaatgtt agaagagcgc gacgtttggc ttcatcatgc tcacgcatgg cctgatagca
    19621 agcgtcaatc atgtggtcat gcaaacgttc tgctgcttcg atagaccaaa gtgtaaaacc
    19681 gtgttcttta acacctttca caccaaagtc attagcctca ccacccattg caaggagcag
    19741 gtaatcaaaa tctagagttt ggtgttccgc aactacttgt ttcttatcgt agtcaatctc
    19801 aacaacctta tctgttacca attgaacctt tggatatttt ttgaagatac gttgaaggtc
    19861 atacttgatt gcattggctt ccacacgccc agccgcaact tcatgcaact ctgtcatata
    19921 ggtatggaaa gagttcttat caatcaaggt aactgttaca tcttgatcct ttttaaaagt
    19981 ttttcctagc aatcgagctg ctgcaatccc cgcataacca gcaccgacaa tcacaatatt
    20041 tttcgtcaca atgtttcctc cttgtgaaaa tcaaaacaaa ttacatgttt ccattatatc
    20101 gtattccaag atagttgaca agcaaatttc aataattagt aatatacaca aacaaaactt
    20161 gccatagtga acaaaaacaa gtatgatagt aaaatagata atcgactaga aagagttttt
    20221 tctctacacc catgaattct aaacgtcaaa cacttaactt tattacgatg ttagcagctc
    20281 aggcagttgt catttctttg attgaacgac tcatcacccc cccatttgct tttgctccag
    20341 gcgccaagct aggactggga aatttgatta gcttaattgc tatctttacc ctccctacaa
    20401 aggatagcct aaaggttgtc gctctacgct tgctcatctc aacctttctg ggaggcacct
    20461 tttccacatt cctctatggc tttgccggaa ctactttgag ttatgtagga atgctctctg
    20521 ccaagcagct cggtccaaac cgtgtcagtc ctattggaat ttctattctg ggcgggatgt
    20581 tgcacaatct tggtcagctt cttgtttttg ctaccattgc ccgttctttc tatgtactaa
    20641 actacctgcc aatcctcgct tttacaggaa ttttatcagg cttattggtc ggactggctg
    20701 ctacctacct cctccaaaag gtcggacctt tacgtcacta tcatcaacta gtcttagcag
    20761 aatggaaata aatctcccta ggtcaactaa ggagattctt tttatggtcc gcaccacttt
    20821 ttcattgccc ataataattt ccccataatc ctggtgtcac aaatataatg agccacctca
    20881 tataaacacc acttataaaa tccatggtaa taaaaaataa tgaagctttc aagaagagaa
    20941 aaaaatcagg ttctttgcgt gttttagtcg tacattttct ttcttttgtg ctacaatatc
    21001 ttcatctttt atttttttga gaaaaggtag aattatgtca ccatttagga tcaaactttc
    21061 tcccagtcag cgaatcatta tcagtttctt attcgtgatt ctgactggat caattttact
    21121 aagtcttccc atctcacaaa ttagcacctc tacagcaagt tattgggatc atctctttac
    21181 atctgtctcc atggtttgtg tgacagggct atttaccaaa gccgttgctg aaacctattc
    21241 tacttttgga cagattatct gtatgatgct aatccaaatt ggtggtttga gcttgatagg
    21301 attcatcggt ctcttcgctt tacgcggtgg tcgtaaaatg aatttcatca atatggcgac
    21361 cttacaagaa gctctaaacc gatctgacac aaaatatttt cgtaacttcc tcaaatcagc
    21421 ttttggtttt accttggcgg tcgaagcctt tggagccctt ttactgtcct ttcattttgt
    21481 gcctgaattt ggatgggcga gaggtttatt tacctccatt ttcgtagcta tatcagcctt
    21541 ttgtaatgct ggttttgata attttggcgc aactagcatc atgcgctatg tggataatcc
    21601 tctaatcaac ataacattag ccagtctcat tattatggga ggtcttggat tctcggtttg
    21661 gtttgacctt caaacacaaa tcgggcaaaa acgtagccta cgaaaactag ggttccatac
    21721 aaagattgtt ctaggcctag cagccattat actaaccctc ggaactctga caaccttact
    21781 cactgaatgg aataaccctt ctactatcgg gcaactatca tttggccata aattattagc
    21841 cagctttttc cagacggtca ccatgagaac cgctggtttt gccagcatcg actatacgaa
    21901 ggctgaacca atcaccctct tgctctatat ctttcagatg atgcttggcg gagccccagg
    21961 tggaacagcc ggcggtatta aaataaccgc cttcctaacc ttagtgctct atgctcgtag
    22021 cgagattctc ggtctccctc ataccaactt tatgggacga accatcgata acctcagcat
    22081 ccgcaaagct tttgcgacat tctcagtctt cctacttatg tttatcatag ggctcttcgc
    22141 acttgcccta acagatgacc gacaaccact tctattttta atgttcgagg tcatgtcagc
    22201 attagccact gtaggtgtta cggcaaatct gactccaagc ctaaccatgg ccggtcaagc
    22261 agtcattatg gcgctcatgt tcttcggccg tatcggtcca ctttctattc tcgcaagcct
    22321 ttctgttcga aaattatcta aaaccgaaag tcttcaatac gcaaaatcat ctatgcttgt
    22381 ttaaaaggag aaatcatgcc aaactatact atcggaattc tcggcctggg agtttttggt
    22441 actaccattg caaaaacatt acacaattac gattgcaata tcattgctat cgataatcat
    22501 gagcaacgta tcaatcatct agaacctatt ctcacacgcg gtattgtcgg agacatcacc
    22561 gatcgctcgc tcctacgtgc agcaggaatc ggtaactgcg atgctgttgt tgtagctact
    22621 ggcgaaaact tggaatccag tgttctggct gtcatgcata gcaaagttct aggtgttcct
    22681 atggtcattg tcaaagtcaa aggaacaact gcgaaagaag tccttcttcg tgtcggtgcc
    22741 gataaggtta tttctcctga acgtgaaaca ggtatttctc tagcaaaaca actactccac
    22801 cgcgatacaa ccagcctctt tgagctcgaa ggcaatgttt ccattgtcga gtttcacccg
    22861 ccagtaaaat ggattggaaa aacactcggc gaattaaaac tccgccaaca ttataaactc
    22921 aatatcatcg gttaccgaag tggcgaaaat caggaattaa acatccaact gactcctgac
    22981 tatgttttca aatctgacga actcatctta gcagtaacag accataacac tgtcgatcat
    23041 tttgaagaac tgacaaatta atactcaatg aaaatcaaaa acagactagc tccaaaggtt
    23101 tggggaacct ttggaggttg gagatagggc gaacgtagtt cgttactact tacgca
//
LOCUS       DASFQD010000023        23139 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.023, whole genome shotgun sequence.
ACCESSION   DASFQD010000023 DASFQD010000000
VERSION     DASFQD010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 23139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23139
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.023"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..2548)
                     /locus_tag="U1021_000700"
     CDS             complement(<1..2548)
                     /locus_tag="U1021_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEM4711268.1"
                     /translation="MKLIKQLIHILISIGLIGSFFLYAHLIQNELGSTKNDGMIEIIA
                     EQPNQVIDSIQINGRYIHSSEIIENQWGINDADLIPNFSSLGEENSLIIKSSSSVRTL
                     SFEYFVSENPTIVKIKVGGQLVESIDTSTGDKYKNLAFIELPYTLRITKDNQFWYLHL
                     IVLALGLSCFILNGSTWRIKRRHISILTILLITQYIFTTFTFPRLYRNELVLFNSSFN
                     KMETQQLLVALTYLIFFSLLGYKQVRGHISKAFKTISLSVIYLLVPIFSLFIIENSYS
                     QFSTLSSNSLWNNLIIIGVLYLILVFTTNLRFASLLILSASVFIGISNQLLIDSRGAP
                     LLFYNLFQITDGLNVASSVAININNRMLQSMVFSYILLTFFFFIPKLYLPKLLPSRTF
                     YSSYDFKWPKRFSRILLGYITLITIVPMINKTIVSNANISLNYWRMYVTYGQFGLPLS
                     LASFYEDSKITEPDGYSASNLSEVLEKYSPEPERQTIRPNIIFIQNESQSDFSNLQGL
                     NMEPDPLSNQHALTDNTVHGTLNVSVFGGGTANTEYEVLTSNPISLLSSNLFPYQQII
                     TQERPSFATYLKNKNYDTVALHPQSGNNYNRNAVYPLLGFNKSYFLDSEPAISSLAPL
                     TIDRGWPSDQFLFNGIKELYTQKGDQPLFSFVVTMQGHGGYPSTEEIYPREVSINGST
                     SEYLAETEFLTSMKKTDEAFADLITFFSTYKEPTVIVMYGDHQPSLTQEFYAQFMDEN
                     NPAAKYSTPFVIWSNFDIKERESTTISPNYLVPYLMDILSESDYALPRSPYQQFLSVM
                     QIEAPIITSWGNTDNNGQQIEDISSLSLYQTYLQLEYNSAVDKRPLTDLYE"
     gene            2762..3910
                     /locus_tag="U1021_000701"
     CDS             2762..3910
                     /locus_tag="U1021_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1972 domain-containing protein"
                     /protein_id="HEM4711269.1"
                     /translation="MKHVFIIGSRGLPAKYGGFETFVQQLVSHQQSEKICYHVACLSD
                     TSHHQHSTYLGADCFTINPPKLGPARVIAYDMMAITYALKIIKEQQIERPIFYILGNT
                     IGGFIVPFAKKIHSVGGTLFVNPDGLEWKRAKWAKPVQRYLKFSEKMMVKYADLIIAD
                     NEGIEDYIQFEYSATNTRFIAYGTDLSPTKLTKESEQIRQYFTNWNIKEKEFYLIIGR
                     FVPENNYVIAIKEFMASNTRRDLVIVANHEGSAYFQKLKDETGFISDKRIKFVGTVYD
                     QELLKYLRQECRAYIHGHEVGGTNPSLLEALAQTNENLVLGVDFNCKVALEGVRYWSK
                     ESGSLSQLINQIDENAEAVELGEIAKKHMKDEYTWEKIVQEYEELFLQ"
     gene            3907..4836
                     /locus_tag="U1021_000702"
     CDS             3907..4836
                     /locus_tag="U1021_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM4711270.1"
                     /translation="MKVNILMSTYNGQQFLAEQIRSIQEQTYTDWTLFIRDDGSSDRT
                     REIIKDFVEQDQRIHFIDVETDENLGVIKSFHRLVHYDTADFYFFSDQDDVWLPNKLE
                     VSLKKAQAYPTNLPLMVYMDLKVVNQNLEVMAESMVKSQSHHANTELVQELTENTVTG
                     GVAMINHHLAEMWQVTEDILMHDWYLALLASAFGNLVFIDQPGELYRQHSDNVLGART
                     LSKRLKKWIRPHILFAVYWDLIKNSQKQARHLLQMPLSQSNRELIEAFVTIMDKPMLE
                     RFRILRKYGLRKNKAFHTLVFTTLIITKFAYKE"
     gene            4839..5645
                     /locus_tag="U1021_000703"
     CDS             4839..5645
                     /locus_tag="U1021_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4711271.1"
                     /translation="MNLLNRENQILLKEMVKTDFKLRYQGSLIGHLWSILKPLLLFTI
                     MYLVFVRFLRFDDGTPHYAVSLLLGMVTWNFFTEATNMGMMSIVSRGDLLRKLNFSKE
                     IIVFSSVAGAAINYAINLMVVFVFAAINGVPFTWSVLIIIPLFFELALLATGIAFILS
                     SLFVRFRDIGPIWEVFLQAGLYATPIIYSLTFILQRGQVTFAKLMMLNPVAQIIQDLR
                     HFIVYSGNTTVSELIENPVIVAIPYILPVVVYLLGITVFRKNAKKFAEIL"
     gene            5645..6859
                     /locus_tag="U1021_000704"
     CDS             5645..6859
                     /locus_tag="U1021_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711272.1"
                     /translation="MVKNNNIAVKVEHVSKSFKLPTESSQSLRTTLVNLFKGIKGYVE
                     YNVLQDISFEVEKGDFFGIVGRNGSGKSTLLKILSQIYVPERGTVAVDGKLVSFIELG
                     VGFNPELTGKENVYLNGAMLGFTAEEIDAMYDDIVEFAELSEFMNQKLKNYSSGMQVR
                     LAFSVAIKAQGDILILDEVLAVGDEAFQRKCNDYFLERKKSGKTTILVTHDMGAVKKY
                     CNKALLIEKGYVKALGEPDDVANQYSFDNVLASISEVTENEEPLHQSDIVKDLQINLV
                     SKNQIEPDESIEIEFKYTVLEDIETHIAFTFLDLERHFDVYNDNSMDLKTFGKGEKFI
                     RVKCKLPSINQAKLKMAVSVRNSNKQPLLFAKTSDTPAIFISRKFSTDNIAEEDAATG
                     FIQRNSQWELLD"
     gene            6880..8604
                     /locus_tag="U1021_000705"
     CDS             6880..8604
                     /locus_tag="U1021_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnan synthesis protein F"
                     /protein_id="HEM4711273.1"
                     /translation="MSRLLVYVHYNKYNVVSEYIYYQLKSIRSIYSDIVFVSNSHVSK
                     DKVQYLQSERLIDFFIQRDNIGYDFAAWKEGLNQVTFYQYDSVTLMNDTCFGPLWNLE
                     DYYSQFDNDVNVDFWGMTNHLETKIDSVVVPEHLQSYFMVFKKRILQSQAFVGFWSSV
                     SELTDIQDVIKLYESQLTKILLSEGYSYKCVLDTSICCKTLENSNVTLEYPEVILKNN
                     VPFIKIKSFTEYPDRIYSLIHLIRMKTKYPVELIERHLRQIIIPGTSFIPQIRVSQTT
                     ETVLSSTSVLLHIHIESVSIFEEYIEELCKIADRCQLLITLPEADFSNKCIIVERYLF
                     TYQLRGQIIKVTDELHFFETVKNYMGDAKYLAHITVKQTKEIKYSVEDIIDRYQLRKM
                     FFTSFDTVISNFESQSNLAVVIPDLTTNQRYDRKSLRENNPELIRQLNILYESLVRTK
                     KVDFYKVPYIIGEEVSWYWIKTEHFNKIEEQFRNIDFSKEVRSLLVPILFIYSAWDLS
                     NDYAVIENTENVSPILEKISFSSERELRLIIEEKEFLQIGLRRTLKIISVGIVSVFKM
                     IKKSLLKN"
     gene            8637..9896
                     /locus_tag="U1021_000706"
     CDS             8637..9896
                     /locus_tag="U1021_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEM4711274.1"
                     /translation="MKSRIVSPKTIFIWNLLGSISSAAISIFLLLLVTRLLTELEADI
                     FSFAYAVANLFVIIASFQVRDYQATDVSKKFSFSQYLATRLITITIMLLLALSYIFLS
                     KYEFQKSVCIFLICLYRGSDALSDVFQGLFQQNARLDIAGKSLFLRNSIVILTFGIGL
                     FITNNLLLSLIYLVISSYLFVFFFDVPNLFQFTRIIKEEINLKAIKNILSECLPLFIN
                     AFLLVTIYNQPKYALNTFFERGVIGTGVQRDFNILFMPVFSMNILLILFRPMITQLAI
                     YRRAGDYNQFKQYQKRIVKMVVGLAVLVLVGGIVLGIPALNILYGTNLNKYWLSFIIT
                     MLGGIASTFATICDNMLTVLRKQKYLVISFAISCLLSILISNPLVEYYGILGAAIAFV
                     SSMWTWFLISLVIYLKLQKHLNWEVQE"
     gene            9893..11200
                     /locus_tag="U1021_000707"
     CDS             9893..11200
                     /locus_tag="U1021_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2142 domain-containing protein"
                     /protein_id="HEM4711275.1"
                     /translation="MKIEKLFLRLAIPFLLISIFVMPVTKVPDEATHAFMSWNILFDS
                     PTSRDTEAMNELRTTDFAYSKPEIHAVDSTEYSSLFTKIRDFSKDKLSIDFSLKSLMS
                     TPQLIGLVVGKLLYPSYGMMVTIGRLFNTIVYIIGIYYLIKKIKYGKMTLFFVSLLPM
                     MIQQAGSLSYDVVNYLAVVAFFVFYVNLLVDKVLTTRKFIKLILLSLLLYLTKANNIL
                     LLALLFFVDFEFEGVLSKFNSLLKWIQKRRLPILILGFGLVLLVSYIFLHNRGGVVHF
                     VKVMINSLFINNRNDHLNGILTVGIFGYFGWFVTQLPLWLIFIDIFIFTLLLFNDGNL
                     KISKTEGLASLFVLPVQVAIIVAGMYFAWTPTAIGPNAIISQGAQGRYFTPFLVYLFP
                     ACLILKEQVSVSVKQKYLIRLITGTVVINFIMYLFLIVDYYWL"
     gene            11223..12212
                     /locus_tag="U1021_000708"
     CDS             11223..12212
                     /locus_tag="U1021_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HEM4711276.1"
                     /translation="MNILFTLNDAFVPQVAACMGSIMRTLNEDDTCHFYLFSDGISQQ
                     NKENLHQFVTDGGNKLTIVELENLESYFDFEVDTNGWASVVLARLLVDKLLPEEVDRI
                     IYLDGDTLVLENIRELWEVDLEGKVLGMCPEPTASSERRESLNLGTYTYHNAGVLLID
                     LKRWRSKSIGTIIFDYYKEKNGELFANDQDALNGALKEEIKTLSITYNYFNIFDVYPY
                     RTLEKLSSPSTFISKEEFVKIRKQPRIVHFLGEERPWRIGNKHRFREDYVSALNQTPW
                     SGTQFESGWQLYFFCFNLFNMVMKPFPMLRYKIITVLIPVFMKYRKIRLQKGV"
     gene            12215..13198
                     /locus_tag="U1021_000709"
                     /pseudo
     CDS             12215..13198
                     /locus_tag="U1021_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027231.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
     gene            13205..15265
                     /locus_tag="U1021_000710"
     CDS             13205..15265
                     /locus_tag="U1021_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM4711277.1"
                     /translation="MIGNTVKRWIRNFTTRLFILSGKYKLLFYILELTKNIAKFFWRI
                     PKYIKRTLLALQRDKQRRNNYSDIKNRYLIYTIYEHQSSLQDYKVIFLEALAKISRDV
                     LIVVNGKLPQADINRLAQYGKVLERENEGYDVAAFRHGIIHTGKEALQQYNQLILVND
                     TNIGPFRDLEEVFSEFNSDQLDFWGISMGEEQLDFTGYNPYGKIPKHLQSYFVVIENS
                     LLRYEGFYDYWEKLSDTDSRNKAIGKHETVFAKYFYDRGFKYDALIKDTKDSALYIHP
                     LKLLKQGCPLVKYSAFRNYDREQYFWHGLERESEIPDLMEYIAKETDYPIEVVSSILE
                     DFKTRENQSYILIIDGVENIIPQCTRYRVLNKAEQLRELGYTVRVINNSLVQLQDAQF
                     ASHIIIYRAPFNDMLKEICRAAHIKNRPVYFDIDDLVFDTKFTDELEFTQGLSKREKK
                     GYDTSVLAYKKMLSLCDYAITSTSKLKDELEQYKNKVILNRNVMSKELVERSLQVKKN
                     SNDNKVKIGYFSGSITHNENFDLISQALLHLLQKYPQVELHIVGYLDIPKPFQKFKKQ
                     IVSHEYVDWRKLPILISQVDINLAPLVTTTFNEAKSEIKWIEAAAVKVVTVASNLGAF
                     EEMIQDGVTGVLADDNEWESKLERLILEQDLRAQIAENAFEFVMNHCTTANRINDFLK
                     EELV"
     gene            15265..16518
                     /locus_tag="U1021_000711"
     CDS             15265..16518
                     /locus_tag="U1021_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEM4711278.1"
                     /translation="MKRILFISPTTSMDNGAEKSIYYLMKYLIQLGHTVINVTHAIGG
                     EPQDKHEQLYKMIGVKNYYLPTIKWWWPDAPGGEILNREEATSYYRQNVQDIAEIIEQ
                     NEIDLVISNTVNVFQGAIAASCQKVPHFWLIHEFPKNEFAYYADKIDFIEEYSSELFS
                     VTGELNNFLTPLFNKKVHSFISYTEQETKVLKKGNQVRIVSVGRLTEGKNQLELIKAY
                     KTLNRLDIELVFIGGWDSKYKAICDEYIHENKLQKNVKFLGNLDNPWEEVTDRDICVF
                     PSSMETFGLVYVEAILRGLPVILSDNLGHLTAFEIFSAGQIYKLGDIEELVTKLEQVI
                     ESFRNFSDRARLDVERLRTLYTPEVAYKEILDGINHLEYTGHQNTNLSHIKGLLTLNM
                     RPTRLERYARLISNMATKIRHKLRL"
     gene            16623..17339
                     /locus_tag="U1021_000712"
     CDS             16623..17339
                     /locus_tag="U1021_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015604473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM4711279.1"
                     /translation="MKVLMIIPAYNEEESILQTVQGIIDYRNSVNFQLDYVVINDGST
                     DHTKEILIQNKLNAVHLVQNLGIGGAVQTGYKYALDNDYDVAVQFDGDGQHDIRSLNS
                     LIQPILVGQADMVIGSRFVGDTLSEFQTSFMRRFGIGVISNMIKLTTGNRIWDTTSGY
                     RLGNRKVIAQFAKRYPIKYPEPESTVHLLKQNFQVVEAPANMFERAGGVSSITPLKSI
                     RYMVEVCSSILIASLMKEGE"
     gene            17339..17695
                     /locus_tag="U1021_000713"
     CDS             17339..17695
                     /locus_tag="U1021_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2304 domain-containing protein"
                     /protein_id="HEM4711280.1"
                     /translation="MTIQALAMFLASLGFLYFIFRNINKNKILFEHAFMWIVIGFGLI
                     VFALFDVIPIKLAYLFGFGLTSNFLLSVAIFVLLVIGFLHSMALSQQKQQIKNLIQEV
                     SMAKKRIAELEEHHAE"
     gene            17685..18473
                     /locus_tag="U1021_000714"
     CDS             17685..18473
                     /locus_tag="U1021_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002886818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM4711281.1"
                     /translation="MQNNHTFVICAYGDSKYLEECIHSLKQQTLQSQLILYTSTPSEY
                     IEQICQKNAIVMHTAQGGGIGKDWNLALSFVTTPYATIAHQDDIYLPDYCEKIMSQMT
                     EETLIAYSDYQEVKEGVAIPLTSNLKIKQLMLRTMAMFPKWKFWRNRVLAFGNPISCP
                     AVTYNLKKLNDFKFNEEMKVSLDWFAWYQIAQKNGSFTFVDESLMYHRIHEESETTNS
                     IENNIRTQEDYEMYLLFWPEFIAKFLLRYYVKSQETNGGNNGEK"
     gene            18572..19687
                     /locus_tag="U1021_000715"
     CDS             18572..19687
                     /locus_tag="U1021_000715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEM4711282.1"
                     /translation="MCLLVGYKHFSLLRDGYIPLNTVLEKQSFKKTSAGQYEKKIGDL
                     SYSLLIDTDKNRVTKAGYQFDISNNIQHFLWMDYLSADKIEEIFNLQVSLNGIFVDVQ
                     NIEFSQHQWIEKFPNLIAHAGGTYREKSYNTFYTNSLEALQQNYSMGHRVFEMDFYLT
                     SDGKMAAVHDWDQFGYMNGVALSSDEWKNFQTFGSPVTDSRFTTMLIGDVLDQMLINK
                     DMFLVTDTKSFEVSEEEVIHQLTEIYNEAMKRSPELLSRIIPQIYNQTMYTTLKKVYD
                     FSNVIYTLYASPDSPEQVIEFVANNPSIKVVTIPLNHGGYFNSEFFNNLHALDKKIYT
                     HTIHTYDELTKYSALGIDGFYTGLLLPSDMERLSSLR"
     gene            19867..20355
                     /locus_tag="U1021_000716"
     CDS             19867..20355
                     /locus_tag="U1021_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EbsA family protein"
                     /protein_id="HEM4711283.1"
                     /translation="MIKIFGKIRYHWQPDLSWAIIYWSLTFTPIFIGMTLLLEKLRVS
                     RLFILLLSLFVVLVVLGLHRYFEIKEKHLRIASANPFAVQKIEIATIEKIEVSYLAIR
                     IFSQEFPNGQVYHMRKWPKKYFINHLAIHNCFKGEIELIDHLIKQDYFEEYYTKKAKS
                     IR"
     gene            complement(20344..20538)
                     /locus_tag="U1021_000717"
     CDS             complement(20344..20538)
                     /locus_tag="U1021_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HEM4711284.1"
                     /translation="MKIKLIPERCIACGLCQTYSSIFDYDDDGIVVFSDDSQFEKTIE
                     PNPDILKAIKSCPTKAISAD"
     gene            20589..21065
                     /locus_tag="U1021_000718"
     CDS             20589..21065
                     /locus_tag="U1021_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM4711285.1"
                     /translation="MSQEPWNEEVYQTETVSRKERLNKGVASTTVFTVLAIIFFVIVL
                     IIGIMAVYLSIGGGSKTDSTKEFYTPSTTTVVAESSSSAAETQESTSTDTTETETSSS
                     LAEATDGSTLTVQAGEGVGQLAARGGISIAELERLNPEKMTTGSWLAHPGDVVRIR"
     gene            21075..21752
                     /locus_tag="U1021_000719"
     CDS             21075..21752
                     /locus_tag="U1021_000719"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEM4711286.1"
                     /translation="MKSIQIAIDGPASSGKSTVAKIIAKNFGYTYLDTGAMYRSATYL
                     ALTNGIEVTDQNRIVALLAQYPIRFGRDENGQQLVFVGDEDVTLPIRDNQVTNNVSAV
                     AALPLVREELVRLQQEIAQAGGIVMDGRDIGTVVLPQAELKIFLIASVEERAMRRFKE
                     NTERGIETDLEILKEEIAARDLKDSTREVSPLKAADDAITFDTTGVSIEGVVKFISEK
                     AKEILDK"
     misc_feature    21779..21907
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00558"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L20 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00558"
     gene            21933..22454
                     /gene="infC"
                     /locus_tag="U1021_000720"
     CDS             21933..22454
                     /gene="infC"
                     /locus_tag="U1021_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000848185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEM4711287.1"
                     /translation="MAKQDLFINDEIRVREVRLIGLEGEQLGIKPLNEAQAIADSANV
                     DLVLIQPQAKPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDKGDFET
                     KLRHARKFLEKGNKVKVSIRFKGRMITHKEVGAKVLAEFAEATQDIAIIEQRAKMDGR
                     QMFMQLAPASDKK"
     gene            22481..22681
                     /gene="rpmI"
                     /locus_tag="U1021_000721"
     CDS             22481..22681
                     /gene="rpmI"
                     /locus_tag="U1021_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002895038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEM4711288.1"
                     /translation="MPKQKTHRASAKRFKRTGSGGLKRFRAYTSHRFHGKTKKQRRHL
                     RKAGMVHAGDFKRIKSMLTGLK"
     gene            22725..23084
                     /gene="rplT"
                     /locus_tag="U1021_000722"
     CDS             22725..23084
                     /gene="rplT"
                     /locus_tag="U1021_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019786714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEM4711289.1"
                     /translation="MARVKGGVVSRKRRKRILKLAKGYYGAKHLLFRTAKEQVMNSYY
                     YAYRDRRQKKRDFRKLWITRINAAARMNGLSYSQLMHGLKLAEIEVNRKMLADLAVND
                     AAAFTALADAAKAKLAK"
BASE COUNT         7666 a         3379 c         4568 g         7526 t
ORIGIN      
        1 actcatatag atctgttaga ggtcgtttat caacggcact attgtattct agttgtaagt
       61 aggtttggta aagtgatagg ctggatatgt cttcaatttg ttggccatta ttatcggtat
      121 ttccccagct agtaatgata ggtgcttcga tttgcataac actcaaaaat tgttggtaag
      181 gtgatcgagg aagggcatag tcggattcgg ataaaatatc catcaaatat ggaacgagat
      241 agtttgggct aatagttgta gattcacgtt ccttaatatc aaaattagac caaatcacaa
      301 aaggggtaga atatttagcg gcaggattat tttcatccat aaattgtgcg taaaattctt
      361 gagtcaaact aggttggtga tcgccgtaca tgacgatgac cgtaggctct ttgtaagtgc
      421 taaagaaagt aattaaatca gcaaatgctt cgtccgtctt cttcatgctg gtcaaaaatt
      481 ctgtttcagc taagtattca gatgttgaac cattaatgct gacttcgcga ggataaattt
      541 cttccgtact tggatagcct ccatgtcctt gcatggtaac aacaaagcta aatagaggct
      601 ggtctccttt ttgggtataa agttctttta ttccgttgaa caagaattga tcagatggcc
      661 agccacgatc gattgttagt ggtgctaagc tactaatagc aggttccgaa tctaaaaaat
      721 aagatttatt aaaccctagt agaggataca ctgcattgcg gttgtaatta tttccggatt
      781 gaggatgtag agctacggtg tcgtaatttt tattttttag ataagttgcg aaacttggac
      841 gttcttgtgt gataatctgc tgatatggga ataaattaga agataataaa ctgattgggt
      901 tacttgtcag aacttcatac tctgtattag ctgttccgcc tccaaataca gaaacattta
      961 atgtaccgtg aacagtatta tctgttaaag catgttggtt tgatagcgga tcaggctcca
     1021 tatttaagcc ctgtaagttt gaaaaatcac tctgtgattc attctgtata aagataatat
     1081 taggtctgat tgtttgtctt tctggttcag gagagtattt ttcaagaact tcactaagat
     1141 tggaagctga atatccatca ggttcagtta ttttactatc ttcatagaaa gaggcgagcg
     1201 agagtggtag cccaaattga ccgtaggtaa cgtacattct ccagtaattt aatgatatat
     1261 ttgcattaga gacgatagtt ttattaatca ttggaacgat tgttattaaa gttatatagc
     1321 ccagtaaaat tctgctgaaa cgtttcggcc acttgaaatc ataactagaa taaaacgttc
     1381 tagaaggtag aagttttggt aaatataatt tagggataaa gaaaaagaag gtcaataaaa
     1441 tataagaaaa taccatgctt tgtagcattc gattgttgat attaattgct acgctagaag
     1501 ctacatttaa tccatctgtg atttgaaaaa gattataaaa caatagagga gcaccacggc
     1561 tgtcaatcaa aagttggtta cttataccaa taaatactga agcagataga attaataggc
     1621 tggcaaatcg tagattagtt gtaaagacca gtattaggta gaggactccg ataatgatta
     1681 gattgttcca aagactattg gaggaaagag tagagaattg tgagtagcta ttttcaataa
     1741 taaataatga aaaaatggga actagaagat aaatcactga tagactaatc gttttgaagg
     1801 ctttagagat atgacctcgg acttgtttgt atcccaaaag actaaaaaat ataaggtaag
     1861 tcagtgcaac taatagctgt tgagtttcca ttttattaaa actggaatta aacagtacta
     1921 gttcgttgcg atataaacgt gggaatgtaa aagtagtgaa tatatattga gtgattaata
     1981 atattgttaa gatgctgata tgtcttctct tgattctcca tgttgatcca tttaagataa
     2041 agcatgatag acctaaagca aggactatta agtggagata ccaaaattga ttatctttag
     2101 ttatccgtaa agtataggga agttcaataa aggctaaatt tttatattta tctccagttg
     2161 atgtgtcaat agattcaacc aactgtccac caactttaat ttttacaata gtcggatttt
     2221 cactaacaaa gtattcaaat gataaggttc ttacagaaga ggaagattta attatgagtg
     2281 aattttcctc acctagagaa gagaaattag ggattaaatc agcatcattg attccccatt
     2341 ggttttctat aatttctgat gaatgaatat agcgtccatt tatttggatg ctgtcgatta
     2401 cttggtttgg ttgttctgcg atgatttcta tcattccatc attttttgta gaacctaatt
     2461 cgttttgaat gagatgtgca tagagaaaaa aacttccaat caatccgatg gagattagta
     2521 tgtgaataag ctgtttaatt aatttcatat ttattaacaa ttctaagttt tatattttta
     2581 tgtaaaagcc agtacatatt atatcaaatt tttctcatta actcaaaatt tgtttttatc
     2641 tatactgtgg agtcagaggc gtagaaaaag aaaaggcttt atagccaaac taggacagaa
     2701 ttaggaaaaa aaactaaaaa atggtataat gaaaagaact gcaatttgat ggagaggatt
     2761 catgaaacac gtttttatta tcggtagtcg tggactgcca gcaaaatatg gtggctttga
     2821 gacctttgtc caacaattgg tcagtcacca gcaatctgag aagatttgtt atcatgtggc
     2881 ttgtttatcg gatacaagtc atcaccaaca ttcgacctac ctgggtgcag attgcttcac
     2941 cattaatcca cccaaacttg gaccagctcg tgtgattgct tatgatatga tggcgatcac
     3001 ttatgccctt aaaatcatta aggaacagca gatagagcga ccaattttct atatcttggg
     3061 aaataccata ggtggcttca tagtaccttt tgcgaaaaag attcactctg ttggaggtac
     3121 cttgtttgtc aatccagacg gtttggaatg gaaacgggcc aagtgggcta agccagtcca
     3181 aaggtatcta aaattttctg aaaaaatgat ggtcaaatat gctgatttga ttattgctga
     3241 taatgaggga attgaggatt atattcaatt tgaatactcg gctaccaata cacgcttcat
     3301 tgcctatggt acagatttaa gtccgactaa gttaacaaaa gaatctgagc aaattcgcca
     3361 atattttaca aattggaaca ttaaagagaa agaattttat ttgattatcg gtcgttttgt
     3421 acctgagaat aactatgtga tagcaattaa ggagtttatg gcaagcaaca cgagacgtga
     3481 tttagtcatc gttgcaaacc atgaaggctc tgcctatttt caaaaattga aagatgagac
     3541 aggctttata tccgataaga ggattaagtt tgtaggaaca gtatatgacc aagaactact
     3601 taagtatctg cgccaagaat gtcgagctta tattcatgga catgaagttg gaggaaccaa
     3661 tcctagtctc ctagaagcgc tggcgcaaac caatgaaaat ttggttttag gtgttgattt
     3721 taactgcaaa gttgccttag aaggtgttcg gtattggagt aaggagtcag gtagcctgag
     3781 tcaattaatt aaccaaattg atgagaatgc tgaagcggtg gaattaggag aaattgcgaa
     3841 aaaacacatg aaggatgaat acacctggga aaaaatcgtc caagagtacg aggaattatt
     3901 tttacaatga aagtaaacat actcatgtcg acctacaatg gtcaacagtt cttagctgag
     3961 caaattcgtt ctatccaaga acagacttac acagactgga cactatttat tcgtgatgat
     4021 ggttccagtg atcgaactag agagattatt aaagattttg ttgaacaaga tcagcgaatt
     4081 cacttcatag atgttgagac agacgaaaat ctcggtgtca tcaaaagttt tcataggcta
     4141 gttcattatg atactgctga tttctatttt ttcagtgacc aagatgatgt ttggctgcca
     4201 aataaactgg aagttagcct gaaaaaagca caagcctatc caacaaattt gccattgatg
     4261 gtttatatgg acctcaaagt tgtcaatcaa aatctagagg ttatggcaga aagcatggta
     4321 aaatctcaat ctcatcatgc caatacggaa ttggtgcaag agttgactga gaatactgtg
     4381 actggcggtg tcgccatgat taatcatcat cttgctgaaa tgtggcaagt aactgaggat
     4441 attttgatgc atgattggta tctggctctg cttgcgtcag cctttggaaa tttggtattt
     4501 attgatcaac caggggaact gtaccgccag cattctgata atgttttagg ggctcgaaca
     4561 ctctcaaaac gcttaaaaaa atggattcgc cctcatattt tatttgctgt ctattgggat
     4621 ttgataaaaa atagtcaaaa acaagcccga cacttactac aaatgcctct atctcagtca
     4681 aatagagaat taattgaagc atttgtaacc attatggata aaccaatgct tgaacgattc
     4741 aggattttga gaaaatatgg attgaggaaa aataaggctt tccatacatt ggtatttaca
     4801 acactcatta ttacaaaatt tgcttataag gaatagttat gaacttattg aatagagaaa
     4861 accagattct tttgaaagaa atggtaaaaa ctgattttaa actgcgttat caaggttctt
     4921 tgattggtca cctgtggtca atcctaaaac cattgttact ttttacaatt atgtatttag
     4981 tctttgtacg ttttttgcgt tttgatgatg gaactccaca ttatgcagta agcttactgc
     5041 ttggtatggt tacttggaac ttttttactg aagcaaccaa catgggaatg atgtccattg
     5101 tttctcgtgg agatttgttg cgtaaattga atttttcgaa agaaattatt gtcttttctt
     5161 cagttgcagg agctgcaatt aattacgcca ttaacttaat ggttgtgttt gtatttgctg
     5221 ctattaacgg ggttcccttt acttggtccg ttttaattat aatcccattg ttttttgaat
     5281 tggcattact agcaacaggt atagctttca ttctatcttc tttatttgta agatttagag
     5341 atattggtcc aatttgggaa gtgttcttac aggctggatt gtatgcaaca ccaattattt
     5401 attcattgac atttatttta cagcgtgggc aagtaacatt tgctaagttg atgatgttga
     5461 accctgttgc acaaattatt caagacttga gacattttat tgtttattct gggaatacta
     5521 cagttagtga attgattgaa aatcctgtta ttgtggcaat tccgtatatt cttccagtcg
     5581 ttgtttacct attgggtata actgtgttta gaaaaaatgc caaaaagttt gcggagattt
     5641 tgtaatggta aaaaataata atattgctgt aaaagtagaa catgttagca agagttttaa
     5701 acttccaacg gagagtagtc agagtctaag aactacttta gtcaatttat ttaaagggat
     5761 taaaggctac gtagagtata atgttttgca ggatatcagt ttcgaagttg aaaaagggga
     5821 cttttttgga attgttggtc gcaatggatc tggtaagtca acactgttaa aaattttatc
     5881 tcaaatatat gttcctgaaa gaggaactgt agctgtggat ggtaaattag tttcttttat
     5941 tgaacttggt gttggtttta atcctgagct aactggtaag gaaaatgtat acctaaatgg
     6001 tgcgatgtta ggattcactg cagaagaaat tgatgcaatg tatgatgata ttgttgaatt
     6061 tgcggaatta agtgaattta tgaatcaaaa gctgaaaaat tattctagtg gaatgcaggt
     6121 acgtttagcc ttttcagttg ccattaaagc gcagggagat attctgatac ttgatgaggt
     6181 tctcgcagtg ggcgatgagg cctttcagcg taaatgtaat gattatttcc tagagcgtaa
     6241 aaaaagtgga aaaacgacca ttcttgtcac ccatgatatg ggagctgtga aaaagtattg
     6301 taataaagct cttctaatag agaaaggata cgtcaaggca ttaggagaac ctgatgatgt
     6361 agctaatcaa tacagttttg ataatgtgct tgcctcaata agcgaagtta cagaaaacga
     6421 agaaccactg catcagagtg atattgtaaa agatttgcag attaacctag tctcaaaaaa
     6481 tcaaattgaa cctgatgaat caattgaaat cgagtttaaa tatacggttt tagaagatat
     6541 tgaaacacat attgcattta catttttaga tttagaacgt cattttgatg tatataacga
     6601 caattctatg gatttaaaaa catttggcaa aggtgagaag tttatccgag tgaaatgtaa
     6661 gctaccttca attaatcagg ctaaattaaa aatggcggtg tcagtacgaa atagtaataa
     6721 gcagccgtta ttatttgcaa agacttctga cacaccagct atttttatta gtaggaagtt
     6781 tagcactgat aatattgcag aggaagacgc agcaaccggg tttattcaga gaaatagcca
     6841 atgggagctg ctagattaat aaaatataac ggaggcagaa tgtcgcgttt gttggtatat
     6901 gttcactata ataaatataa tgttgtcagt gaatatattt attatcaatt aaagtcgata
     6961 cgaagtattt attcagacat agtttttgtt tctaacagcc atgtttcaaa ggacaaagta
     7021 caatatttac agtcggaacg actgattgat ttttttatcc aaagagataa tattggttat
     7081 gattttgcgg catggaaaga agggctgaat caagtaacat tttatcaata tgattcggta
     7141 actctgatga atgatacatg tttcggaccc ctctggaacc tagaggatta ttatagtcaa
     7201 tttgacaatg atgttaatgt tgatttttgg gggatgacca atcacttaga gacaaaaata
     7261 gatagtgtag ttgtccctga acatttacag tcatatttta tggtatttaa aaaacgaatc
     7321 ttgcagagtc aagcattcgt tggtttttgg tcatctgtaa gtgagttaac agatatacaa
     7381 gatgttataa aattatatga gagccaattg acgaaaatac ttttatcaga gggctatagc
     7441 tataagtgtg tattagatac gtccatttgt tgtaagaccc ttgaaaatag taacgtaaca
     7501 ctagaatatc cagaagttat acttaaaaat aatgttccat tcataaaaat aaagagtttt
     7561 actgaatatc cagatagaat atactcttta atacatctta ttaggatgaa aacgaaatac
     7621 ccagttgaat taatcgagag gcatttgaga cagataatta ttccgggtac gagttttatt
     7681 cctcaaatac gggtttcgca aacgacggaa accgttctat cttcgacgtc ggtacttctt
     7741 catattcaca tagaatcagt atctattttt gaagagtata ttgaagagtt atgcaaaata
     7801 gccgataggt gccagttact aataacattg ccagaagctg atttttcaaa taagtgtatt
     7861 atagttgaga gatatttgtt cacctaccaa ttgagaggac agattataaa agtcacagat
     7921 gaattgcatt tttttgaaac agtaaaaaac tatatgggag atgccaaata tcttgctcat
     7981 ataactgtca aacaaacaaa ggaaataaaa tattctgtag aggatattat tgacaggtat
     8041 cagttgagga aaatgttttt tacatcattt gatacagtga tttctaattt tgaatcacaa
     8101 tctaatttgg ctgtagttat tccagactta acaactaatc aaagatatga tagaaaaagt
     8161 cttcgagaga acaatccaga acttattcgt caattaaaca tactttatga atcacttgtg
     8221 agaactaaga aagttgattt ttataaagtg ccttatataa ttggagaaga agtaagttgg
     8281 tattggataa aaacagaaca ctttaataag attgaggaac aatttagaaa cattgatttt
     8341 tcaaaagaag ttagatcatt gctagttcca atattattta tttatagcgc gtgggattta
     8401 tcaaatgatt atgcagtgat cgagaatact gaaaatgtga gtccaatatt ggaaaagatt
     8461 agtttttcca gcgaaaggga attgcgttta attattgaag aaaaggaatt tttacaaatt
     8521 ggactgagaa ggacactaaa gataatttca gttggaattg taagcgtgtt taagatgata
     8581 aagaaatctc tattaaaaaa ttagggataa cggatgacaa acaaggggaa gatagtgtga
     8641 agagcagaat agtatcacca aaaacaatat ttatttggaa tttattagga agtatttcct
     8701 cagcagcaat atcaatattt ttattgttac tagtaacacg tttgttgacg gaattagagg
     8761 ctgatatttt tagttttgct tatgcagtag caaatctttt tgtaatcatt gctagttttc
     8821 aggtaagaga ttatcaagcg acggatgttt cgaaaaagtt ttcgtttagc cagtatcttg
     8881 caacaaggct tataacaatc actattatgc tattacttgc cttaagctat atttttctgt
     8941 ctaaatatga atttcaaaaa tctgtttgta ttttcctaat atgtttgtat cgcggaagtg
     9001 atgctctgtc ggacgttttt caaggattgt tccaacaaaa tgctcggcta gatattgcag
     9061 gtaaatcact ttttttgaga aactctattg tgattttgac atttggaatt ggtttgttta
     9121 taaccaataa cctgctactc tcattaatct atctagtaat tagttcatat ttatttgttt
     9181 tcttttttga tgttccgaat ttgtttcaat ttacgaggat tatcaaagaa gaaattaatt
     9241 tgaaagccat taaaaatata ttgtcagaat gcttgccgtt atttattaat gcatttttac
     9301 ttgttactat ctataatcaa cctaaatatg ctctcaatac tttttttgag agaggtgtta
     9361 taggaacagg tgttcaaaga gattttaata ttttatttat gcctgttttt tcaatgaata
     9421 ttttgttgat tttgtttaga cccatgataa ctcagttggc tatatataga agagctgggg
     9481 actataatca atttaaacaa tatcagaagc gtatcgttaa aatggttgtc ggattagctg
     9541 tgttagtttt ggttggggga atagtgttgg ggattccagc attaaatatt ctctacggaa
     9601 cgaatcttaa taaatattgg ctcagcttta ttataacaat gcttggggga attgcgagta
     9661 cctttgcaac catttgtgat aacatgctta ctgttttgag gaagcaaaag tatctcgtaa
     9721 tttcatttgc aatttcttgt ttattgtcca tattgatttc taatccactg gtagaatatt
     9781 atggaatatt gggggcagct attgcttttg ttagttcgat gtggacttgg tttttaattt
     9841 ctttagtaat atatctaaaa ttgcaaaaac atttgaattg ggaagtacaa gaatgaagat
     9901 agaaaaatta tttttaaggt tagcaatccc ctttttgtta atttcaatat ttgttatgcc
     9961 tgtgacaaag gttcctgatg aagcaaccca tgcttttatg tcgtggaata tattatttga
    10021 ttctccgaca agtagagata ctgaggcaat gaatgaatta cggacaacag attttgcata
    10081 ttcaaaaccg gagattcatg cagttgattc tacagaatat tcaagccttt ttaccaaaat
    10141 tcgtgatttt tcaaaggaca aattatctat cgatttttct ctgaaatcgt taatgagtac
    10201 acctcagcta attggtctag ttgtaggaaa attgctttat ccgtcatatg gtatgatggt
    10261 cactataggg cgccttttta atacaatagt ctatattata ggtatctact atttgataaa
    10321 aaaaataaag tatggaaaga tgaccctgtt ttttgtctca cttttaccta tgatgattca
    10381 gcaggctggc tcactgtctt atgatgtggt gaactatctg gctgttgttg cattttttgt
    10441 tttttatgtt aacttattgg tagacaaggt actgaccacc aggaaattta tcaaattaat
    10501 attactatcc ttgctactat atttaacaaa agcaaataat attttacttt tggcactatt
    10561 gttttttgtt gattttgaat ttgaaggcgt cttatctaag tttaattctc ttttaaaatg
    10621 gattcaaaag agaagattac caattcttat tttagggttt ggactagttt tacttgttag
    10681 ctatatattc ctacataaca gaggtggtgt cgtgcacttt gtgaaagtga tgataaacag
    10741 tttatttatc aataacagaa atgatcatct taatggtatt ttaacagttg gtatttttgg
    10801 ttattttggc tggtttgtca ctcaactacc tctctggtta attttcatag atattttcat
    10861 ttttacgtta ttattattta atgatggaaa tttaaagata agtaaaacag aaggtcttgc
    10921 ttcgttattt gtactccctg ttcaggtagc tatcattgta gcgggcatgt attttgcatg
    10981 gacaccgaca gctattggac caaatgcaat aatttctcag ggggcacaag gaagatactt
    11041 tactccgttt ttagtctatc tatttccggc atgtttaata ttaaaagagc aggtaagtgt
    11101 atcggtaaaa cagaagtatt tgatacggtt gatcactggc acagtagtca ttaactttat
    11161 catgtatcta tttttgatag tggattatta ttggttgtaa gaagatagtg gaagagggaa
    11221 acgtgaatat attatttaca ttgaatgatg cttttgttcc gcaagtagcg gcttgtatgg
    11281 gctcaatcat gcgaacatta aacgaagacg atacatgcca tttttatctt ttctcagatg
    11341 gtataagtca acagaataaa gaaaaccttc atcaatttgt taccgacgga ggaaataaat
    11401 tgacaatcgt tgaattggaa aacttggaat catattttga ttttgaagtt gacacaaatg
    11461 gttgggcttc ggttgtactt gcaagattac ttgtagataa attactgccc gaagaagttg
    11521 atagaatcat ctatttagat ggagatacct tagttttaga aaatattcgg gagctatggg
    11581 aagtagattt ggaggggaaa gtccttggaa tgtgcccaga accgacagcg tcgtctgaga
    11641 gaagagaaag cttaaatttg ggtacgtata catatcataa tgcgggagtt cttctaatcg
    11701 atttgaaacg gtggcgttca aaaagtatag gaacaattat ttttgattat tataaagaaa
    11761 aaaatggaga gctttttgct aatgatcaag atgcactgaa tggagcattg aaagaagaga
    11821 taaaaacact ctcaatcact tataattatt ttaatatttt tgatgtttat ccatatcgta
    11881 cattggaaaa attaagtagt ccttcaacgt ttatttcaaa agaagaattt gtaaaaattc
    11941 gtaagcaacc acgtattgtt cattttttag gcgaagaacg cccatggaga atcggaaata
    12001 aacatcgatt tagagaggac tatgtttctg cattaaatca gacgccatgg agtggtactc
    12061 aatttgagag tggttggcag ctttactttt tctgctttaa tctttttaac atggttatga
    12121 agccttttcc tatgttgcgt tataaaatta ttacagtctt aattcctgta ttcatgaaat
    12181 ataggaaaat tagattacaa aaaggagtct aggtgtgaag ttttccgtta ttatcccagc
    12241 gtacaatgtt gctgattatc tggaagaatg tgtgtatagt gtactgaatc agaattatga
    12301 agaatttgaa atattgttgg tagatgacgg ttctacagat ggtaaaacct ccaatatatg
    12361 cgataaatta gcagctaaag atgatagggt gaaggtattt catcaaacta atggtgggta
    12421 atcaattgcg agaaatacgg gaataaaaaa tgctagtggt gattatattt tattcctaga
    12481 tggtgatgat ttttggactg atgtgcattt tttagatgaa atcaatgaag aactacattc
    12541 tcacgaggaa gtggtagatg cagtaattta tccattttca tactggtatg gtaatgctga
    12601 tataagagtt cgtgatttcc ctcaaaaatt acctagacat gaaattatta ctgattctgt
    12661 tctacttgta gaaacaggcg cattgattgc tcctgtttgg aacaagtgtg ttcgcagaga
    12721 actatttgca gattctttga tgtttccaga tgggttaatg tacgaagatg gtatttggtg
    12781 tgcagaccta ttaaaaataa taacttgttg ttgtgtcatt gaaaattcta attatatgta
    12841 tagacaaaat agagatggaa gttttactaa caaaattaca caaaaaaaag tctatcatgc
    12901 ctttagagga attgaagaaa atttaaagaa ttttaaacaa ctatcgcatg agaaacaaga
    12961 agcacttttg atttatttat caaattctta tatttccatc ttgccatttg tatttccata
    13021 tctgaataat tctgatataa aaatgtttgt gaaaaaattt agatatttgc taaaatattc
    13081 acagaaggta gaacttgttt cgtttagaat ctcaggttta atgaccagag ttctggggat
    13141 atatgtatca acatttattc aaaacaaact tttgaaaatt tataaaagta gacaataata
    13201 gaaagtgatt ggtaacactg tgaaaaggtg gattagaaat ttcacaacgc gattatttat
    13261 cttatcaggt aaatacaagc tattgtttta tatattagag cttaccaaaa atattgcaaa
    13321 gtttttctgg agaattccaa aatatataaa gcgaactcta ctagctttgc aacgtgataa
    13381 acaacgtaga aataattatt cagatatcaa aaatcgttac ttgatttaca caatttatga
    13441 acatcaatcg tctttacagg actataaagt aattttttta gaggcattgg ctaaaatttc
    13501 tcgagatgtt ttaattgttg taaatggtaa acttccacag gctgatataa atcgtttagc
    13561 acaatatggt aaggttttgg aaagagaaaa tgaggggtat gacgttgcgg ctttccgaca
    13621 tgggataata catactggaa aagaggcgtt acaacagtat aatcagctca tcttggttaa
    13681 tgatacgaat attggtcctt ttagagattt agaagaggtt ttctctgagt ttaattccga
    13741 tcagctagac ttttggggaa tttccatggg tgaggagcaa ctagacttta ctggttataa
    13801 cccttatggt aaaattccta agcacttaca atcatatttt gttgttattg aaaatagctt
    13861 gcttaggtat gaaggatttt atgattattg ggaaaagctc tctgatacgg attctcgtaa
    13921 taaggcaatt gggaaacatg aaactgtgtt tgcaaaatat ttttatgatc gaggctttaa
    13981 gtacgatgca ttgattaaag acacgaaaga tagtgcattg tatattcatc cgcttaaatt
    14041 attaaaacaa ggttgtccat tagttaagta ttcggccttt agaaattatg acagagaaca
    14101 atatttttgg catggtttag aaagagaatc tgagattccg gatttgatgg agtatattgc
    14161 taaggaaaca gattatccga ttgaagtggt gtcttctata ttagaagatt ttaaaactag
    14221 agaaaatcaa tcttatattt tgattattga tggtgtcgaa aatattattc cacaatgtac
    14281 acgttatcgt gtgttaaata aggctgagca attgcgagaa cttggttata cagttcgagt
    14341 gataaataat tctcttgtac aacttcagga tgcacagttt gctagtcata ttattattta
    14401 tcgtgctcca ttcaacgata tgctgaaaga aatatgtagg gcagcacaca taaagaacag
    14461 acctgtttat tttgatattg atgatttggt ttttgataca aaatttacag atgaacttga
    14521 atttacccaa ggcttgagca agagagagaa aaagggctat gatacaagtg tcttggctta
    14581 caaaaaaatg ctttctctct gcgattatgc tatcacatcg acttcgaaat tgaaagacga
    14641 acttgaacaa tataaaaaca aggttatctt gaatcgcaac gtcatgtcta aagaattagt
    14701 tgagcgtagt ttacaagtta agaaaaattc gaacgacaat aaagttaaaa taggatattt
    14761 ctcagggtca attacacaca acgaaaattt tgatttaatt agtcaagcat tgctacacct
    14821 acttcaaaag tacccgcaag tggaattaca tatagtagga tatttagaca ttccgaaacc
    14881 attccaaaaa ttcaaaaaac agattgtgag tcatgagtat gttgattgga gaaagcttcc
    14941 aattttaatt tcacaagttg atattaactt ggcgccgctt gtaaccacaa cctttaatga
    15001 agcaaagtcg gaaattaaat ggatagaagc ggcagcagtt aaagttgtga cagtcgcaag
    15061 taatcttgga gcatttgaag agatgattca agatggagtg actggagttc tagcagatga
    15121 taacgaatgg gaaagtaaat tggagagatt gattcttgaa caagacttga gagcacaaat
    15181 agcagaaaat gcttttgagt ttgtaatgaa tcattgcact acagcaaata gaattaatga
    15241 ttttttgaaa gaagagttag tctaatgaaa cgtattttgt ttatttctcc tacgactagt
    15301 atggataatg gtgcggagaa gtctatttat tatctaatga agtaccttat tcaactggga
    15361 cacacagtta taaatgttac tcatgcaata ggaggggaac cacaagataa gcatgagcaa
    15421 ctttataaaa tgataggggt taagaattac tatttgccaa ctattaagtg gtggtggccg
    15481 gatgcaccag gtggagaaat ccttaataga gaagaggcta caagctacta tcgccagaat
    15541 gttcaagaca tagctgaaat tattgagcaa aatgagatag acttggttat ttcaaatact
    15601 gttaatgttt ttcaaggagc aattgctgcc tcatgtcaaa aggttcctca tttctggcta
    15661 attcatgaat ttcctaaaaa tgagtttgct tattatgctg ataaaattga cttcatagaa
    15721 gagtattctt cagaattatt tagtgtgact ggagagttaa ataatttttt aacaccacta
    15781 tttaataaga aagtccattc gtttatttct tatactgagc aagaaacaaa agttttaaaa
    15841 aaaggcaatc aagttagaat tgtttctgtt ggtcgattaa cagaaggaaa aaatcaatta
    15901 gaacttataa aagcatataa gacactaaat agattagata ttgaattggt ttttattgga
    15961 ggatgggata gtaaatataa agctatttgt gatgaatata tccatgaaaa taaattacag
    16021 aaaaatgtta aatttttagg taacttagat aatccttggg aagaagtaac tgatagagat
    16081 atctgtgttt tcccttcatc tatggaaact tttggcttag tctatgttga agcaatctta
    16141 agagggcttc cagtaattct atcagataat ttaggacatt tgacggcatt tgaaatattc
    16201 tcagcaggtc aaatttataa attgggcgat atagaagagt tggtgactaa gttagagcaa
    16261 gtgattgaat cctttagaaa tttttcagat agggctcggc ttgatgtgga acgtttacgt
    16321 actctatata caccggaagt tgcctataaa gaaatactgg acggcatcaa tcacttagaa
    16381 tatactggac accaaaatac aaatttaagt cacataaaag ggttgctgac tttaaatatg
    16441 cgtccaacaa gattggagcg ttatgcaaga ttgattagca atatggcgac aaaaatcaga
    16501 cataaacttc gactttgatg gataatagga tatctatgtt aaaatatgta ttattatagt
    16561 ttcttcaaat gagtaagtag aatctaaaaa gttatataga attctagttt tagagagaaa
    16621 aaatgaaagt attaatgatt atccctgcct acaatgaaga ggaaagtatc cttcaaactg
    16681 ttcagggaat tatagattat agaaatagtg tgaatttcca attggattat gttgtcatta
    16741 atgatggctc aacagatcac acgaaagaaa ttttgattca aaataaatta aatgctgttc
    16801 atctagtaca aaatttaggt attggtggag ctgttcagac gggatataaa tatgccttgg
    16861 acaatgacta tgacgtagca gttcaatttg atggtgatgg tcagcatgac attcgttcat
    16921 taaatagctt aattcagcca atcttagttg gtcaggctga tatggtgatt ggctcacgct
    16981 ttgttggtga tactttgtcg gaatttcaaa ctagctttat gaggcgtttt ggaataggtg
    17041 ttatttcaaa tatgattaaa ttaacaactg gaaaccgaat ttgggatact acatcaggtt
    17101 atcgtttggg aaatagaaaa gtgattgcac aatttgcaaa acgataccca attaaatatc
    17161 cggaaccgga atcaactgtt catttactaa agcaaaattt ccaagtagta gaagcaccgg
    17221 caaatatgtt tgaaagagcg ggaggggttt catccataac acctctaaaa tcaattcgtt
    17281 atatggttga ggtttgttca tcaatcttga ttgcatcatt aatgaaggag ggagaataat
    17341 gaccatacaa gcattagcta tgtttcttgc ctcactaggt tttttgtatt ttatttttag
    17401 gaatattaat aaaaataaga tcttattcga acatgccttt atgtggattg ttattggctt
    17461 cggactgatt gtttttgcgc tctttgatgt tattcctatt aaattggctt acttattcgg
    17521 gtttggtctg acttccaatt tcttgttatc tgtggcaatt tttgttctct tggtgattgg
    17581 atttttgcat agtatggctt tatctcaaca aaagcagcaa attaaaaatt taattcagga
    17641 agtatcaatg gctaaaaaaa gaattgctga gttggaggag catcatgcag aataaccata
    17701 catttgttat ctgtgcttat ggagatagta agtatctaga agaatgcatc cattcgttaa
    17761 agcagcaaac acttcaatca caactcatcc tatacactag tactccaagt gaatatatag
    17821 aacaaatttg ccaaaagaat gcaatcgtaa tgcataccgc acaaggagga ggtattggaa
    17881 aagattggaa tttagcactc tcttttgtaa caacccctta tgctacaatt gctcatcaag
    17941 atgatattta tttaccagac tattgtgaaa aaataatgtc tcagatgaca gaggaaacgt
    18001 tgattgctta ttcagattac caggaagtta aggaaggtgt ggctattccc ttaacttcaa
    18061 atttgaaaat caagcaactc atgttacgga caatggccat gtttcccaaa tggaagtttt
    18121 ggcggaatag ggttttagcc tttggtaatc caatttcttg tccagctgtg acctataatt
    18181 tgaagaaact gaatgatttc aagtttaatg aagaaatgaa agtttctctt gattggtttg
    18241 cttggtatca gattgcacaa aaaaatggga gctttacctt tgtagatgag agtttgatgt
    18301 atcatcgtat ccatgaggaa tctgagacga caaatagcat tgaaaacaat attcgtacac
    18361 aagaagacta tgaaatgtat ttgttgttct ggccagagtt tattgccaaa tttctcttga
    18421 gatactatgt taagagtcaa gaaacgaatg gaggaaacaa tggggagaaa taaaatagaa
    18481 ggaaatacac gaactcgcaa acgaacacgt tgtcgctttg ttaatatata tatatatata
    18541 tatatatata tcaataaatg tatctttatt catgtgttta ctggttggct acaagcattt
    18601 ttctttgttg cgagacggtt atattccatt gaatacggtt ttagaaaaac aatcatttaa
    18661 aaaaacttct gctgggcagt atgagaaaaa aatcggtgat ttatcatact ccttgctgat
    18721 tgatacagat aaaaacagag tgacaaaagc aggttatcaa tttgatatta gcaataatat
    18781 tcagcatttt ttatggatgg actatctgtc agcagataag attgaggaaa tattcaattt
    18841 gcaagtctct cttaatggaa tttttgtgga tgttcaaaat attgaatttt cacaacatca
    18901 gtggatagaa aaatttccaa atcttattgc tcatgctggt ggtacttatc gtgaaaagtc
    18961 ctacaatact ttttatacga actctttaga agcgttacaa caaaactatt ctatgggtca
    19021 ccgagtattt gaaatggatt tctatttaac tagtgatggg aagatggcag ctgtccacga
    19081 ttgggaccaa ttcggctata tgaatggtgt agctttgagc tcagatgaat ggaaaaattt
    19141 tcaaactttt ggatcaccag tcactgattc acgttttaca acgatgctta ttggtgatgt
    19201 gttagatcaa atgctgatta ataaggatat gttcttagtg acggatacta aatcttttga
    19261 agtttcagaa gaagaggtaa tccatcagct tactgaaatt tataatgaag caatgaaacg
    19321 aagccctgaa ttactaagtc gtattatccc acaaatttac aatcaaacga tgtatactac
    19381 cctaaaaaaa gtttatgatt tctcgaatgt tatctacacg ctatatgcct cgcccgatag
    19441 tccggaacag gttattgaat ttgtggctaa taatccatct attaaagtgg ttactattcc
    19501 tttgaatcat ggtggatatt ttaattcaga attttttaat aaccttcatg ctttagataa
    19561 aaaaatctat acccatacca ttcacacata tgatgaattg acgaaatact ctgcgcttgg
    19621 aattgatggt ttttataccg gtctattatt accaagtgat atggagagat tatcgagttt
    19681 gaggtaatct ttattattac tgatggcact attttaatca tatcatcaaa aaatatttca
    19741 aaagcatttc agaagtttta caaacaaact aatattgtca tgtaaatgta ataaaaattt
    19801 caaaagatag aggttttcat aggaaaatct ctatttttgt gctagaataa tagatggagg
    19861 tccgatatga tcaaaatttt tggtaaaatt cgttaccatt ggcaaccgga tttatcatgg
    19921 gccattattt actggtcact taccttcacg cctattttca ttggtatgac acttttattg
    19981 gaaaagttga gagtttcaag attatttatc ttacttctct ctctctttgt tgtattagta
    20041 gtgcttggct tacatcgcta tttcgagata aaagaaaagc atttacggat tgcttcggct
    20101 aatccttttg cagtacagaa aattgaaatt gctaccatag aaaaaattga agtttcttat
    20161 ctagccattc gcatattttc acaagaattt cccaatgggc aggtgtatca catgcgcaaa
    20221 tggccgaaaa aatactttat taaccattta gctattcata attgcttcaa gggtgagatt
    20281 gaattaatag accatttaat aaaacaggat tattttgaag agtattatac aaaaaaagcc
    20341 aaatcaatcc gctgaaatgg cttttgtagg acaggatttg atggctttga gaatatctgg
    20401 attgggttca atcgttttct caaattgtga gtcgtctgaa aaaacaacga taccgtcgtc
    20461 atcataatcg aatatagatg aataagtttg gcagagcccg caggcaatgc accgttcagg
    20521 aataagtttt attttcatat tagtattgta atcatatttt aataaaaata caaggagttt
    20581 tctcgataat gtcacaagag ccatggaatg aagaagttta tcaaacagaa acagttagtc
    20641 gaaaagaacg tctaaacaag ggagtagcaa gtacaacagt atttacagtc ttggcaatta
    20701 ttttctttgt tatcgtactg attattggaa ttatggctgt ctatctctca atcggtggcg
    20761 gtagtaaaac agattcaaca aaagaatttt ataccccaag cactacaaca gtcgtagcag
    20821 agagctcttc atcggctgct gagacacaag aatctacttc gactgacacg acagaaacag
    20881 aaacaagttc cagtctagca gaagctacgg atggctctac ccttactgtt caagcaggtg
    20941 aaggtgttgg acaattagcc gcacgtggcg ggatttcaat tgctgagtta gagcgattaa
    21001 atccagagaa aatgaccaca gggtcttggc ttgcgcatcc aggtgatgta gtccgtatta
    21061 gataaagagg ggttatgaaa tcaattcaaa ttgcaattga cggtccagct tcaagtggaa
    21121 agtcaacggt tgctaaaatt attgctaaaa attttggtta tacttactta gatacaggag
    21181 ctatgtatcg ctcggctacc tatctagcct tgacaaacgg catagaggtc acagatcaaa
    21241 atagaatcgt ggccttgctt gctcagtatc ctattcgatt tggtcgtgat gaaaatggcc
    21301 agcaattagt ttttgtgggt gatgaagatg tcactttgcc tattcgtgat aaccaagtta
    21361 caaataatgt atcagcagta gcagcacttc ctctagtacg ggaagaattg gtacgcctgc
    21421 aacaggaaat tgcccaggct ggcggcattg ttatggatgg tcgcgatatt ggaacagttg
    21481 ttttaccaca ggcagaactc aaaatattcc ttattgcctc tgttgaagag cgtgccatgc
    21541 gtcgttttaa ggaaaatacg gaacgtggca tcgagacaga cttggaaatc ttgaaagagg
    21601 agattgcagc tcgtgacctg aaagacagta ctcgggaggt ttcacctttg aaagctgctg
    21661 acgatgccat cacatttgat acaacaggtg tatccatcga aggtgtagtg aaatttattt
    21721 cagaaaaagc gaaagaaatt cttgacaagt agttttagac atgttagaat agtcatattg
    21781 agaaaagcag aagtgagagc ttctcgcctt gcgactaacg ttgtctggct ctacggatta
    21841 agatttcttc ggaaagaata atggtgtagt gcggacttgt ttagcaagtc cgtttcgttt
    21901 ttctcgaaaa atataaaatg aggtgaaaag ccatagcaaa gcaagatttg ttcatcaatg
    21961 atgaaattcg agtgcgtgaa gttcgtctta tcggtcttga gggtgaacag ttgggaatca
    22021 aaccgctcaa tgaggctcag gccattgctg atagcgccaa cgtggattta gtattgattc
    22081 aaccacaagc taaaccacca gtagcgaaaa ttatggacta cggtaagttc aaatttgaat
    22141 atcagaagaa acagaaagaa caacgcaaaa aacaaagtgt tgtcactgtg aaagaagtgc
    22201 gtctaagtcc agttattgat aaaggggact tcgagacaaa acttcgtcat gcccgtaaat
    22261 tccttgaaaa aggaaataag gttaaggttt cgatccgttt caagggtcgt atgattaccc
    22321 acaaagaagt tggagcgaaa gtattagctg agttcgctga agcaacccaa gatattgcca
    22381 ttatcgaaca acgcgctaag atggacggac gtcaaatgtt tatgcaattg gccccagctt
    22441 cagataaaaa ataagctttt taagcaaaag gagaattaac atgccaaaac aaaaaactca
    22501 ccgcgcatca gctaaacgtt tcaaacgtac aggttctggt ggattgaaac gcttccgcgc
    22561 ttatacttca caccgtttcc acggtaaaac taaaaaacaa cgtcgtcacc ttcgtaaagc
    22621 aggtatggta catgctggtg acttcaagcg tatcaaatca atgcttacag gtttgaaata
    22681 agccgactta ctagaattta gattatcatt tggaggaaaa ttaaatggca cgtgttaaag
    22741 gtggcgttgt ttctcgtaaa cgccgtaaac gtattttaaa attagctaaa ggttactacg
    22801 gagctaaaca tctcttgttc cgcactgcga aagaacaagt catgaactct tactactatg
    22861 cataccgtga ccgccgtcag aaaaaacgtg atttccgtaa attgtggatc actcgtatca
    22921 atgcggctgc tcgtatgaac ggtttgtcat actcacaatt gatgcacggt ttgaaattgg
    22981 ccgaaatcga agtaaaccgc aaaatgcttg ctgacttggc agtgaacgat gcagcagctt
    23041 tcacagctct tgcagatgct gctaaagcaa aacttgctaa ataagtataa aaatgtaaag
    23101 aacttggtag tgatgaacca ggttctttat ttttggaaa
//
LOCUS       DASFQD010000024        23102 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.024, whole genome shotgun sequence.
ACCESSION   DASFQD010000024 DASFQD010000000
VERSION     DASFQD010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 23102)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23102)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23102
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.024"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(107..493)
                     /locus_tag="U1021_000723"
     CDS             complement(107..493)
                     /locus_tag="U1021_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002931159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM4711290.1"
                     /translation="MKFDAVHHIAIIGSDYDKTREFYVEKLGFEQVDEHIRPEKNDIL
                     FNVKKGNIILEIFIKPDAPLRPALPNPEHTGLRHLAFQVADVEACLEEFDRLDIRHEV
                     LRTDDFDGKKMAFFFDPDGLPLEIHE"
     gene            complement(493..2862)
                     /locus_tag="U1021_000724"
     CDS             complement(493..2862)
                     /locus_tag="U1021_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEM4711291.1"
                     /translation="MRKTSKKGKATRRPTKAELAQQERVKNITLRVLGLLFIAFAASR
                     LGVFGVTSYNIFRLLFGSLAYLLLAGAFIYLLIPKVLREREGTISGFWLIVIGLLIEF
                     QAYLDWTYQGSDLFGHTLKLALSDLAKFQVTAFLGGGMIGSIFYLPVSFLFANVGSFF
                     IGLLVIAFGIFFVSPWSVYDVADGLAVAKDKLVETQVKRAELRTQKKAEREEKRQQEL
                     ARLEEERLRLEEEEESARALALVDRHVDLETGEILEEEPVQVPIISEYDHLDIEDEFP
                     IMLAEDDQPAQSNSASQDSEPNEFEKDETDVQIDFKPKQRLAYKLPSIDLFAPIKAKS
                     QSNEKRIVRQNIKVLEDTFASFGIKVVVECAEIGPSVTKYEVKPAVGVRVNRISNLAD
                     DLALALAAKDVRIEAPIPGKSLVGIEVPNSEVATVPFRELWEQSKTDPDKLLEIPLGK
                     AVNGSVRSFNLARMPHLLVAGSTGSGKSVAVNGIISSILMKAGPDQVKFMMIDPKMVE
                     LSVYNDIPHLLIPVVTNPRKAARALQKVVDEMEKRYELFSQIGVRNLEGYNAKVEEFN
                     SRSEEKQIPLPLIVVIVDELADLMMVASKEVEDAIIRLGQKARAAGIHMILATQRPSV
                     DVISGLIKANVPSRIAFAVSSGTDSRTILDENGAEKLLGRGDMLFKPIDENHPVRLQG
                     SFISDDDVEAIVGFIKDQADADYDESFDPGEVAEGDGDAGFGDAGGDPLFNEARALVV
                     ETQKASASMIQRRLSVGFNRATRLMEELEAAGVIGPAEGTKPRKVLETQ"
     gene            complement(2988..4346)
                     /locus_tag="U1021_000725"
     CDS             complement(2988..4346)
                     /locus_tag="U1021_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 32 protein"
                     /protein_id="HEM4711292.1"
                     /translation="MKTVVEANQFIQTEKGNVNPIFKPQAHLTPETGWINDPNGFIYF
                     RGEYHLFYQFNPYESVWGPMHWGHAKSKDLVNWEHLPVALAPDKDYDKDGCFSGSAIV
                     KDDVLWLMYTGHINNEDGTVSQVQNMAFSTDGIHFEKIEQNPVATADGLPEEVIANDF
                     RDPKIFEKDGHYYSVVATKHKDNVGCIVLLSSPNLTDWKFESIFLKGEVNQGFVWECP
                     DYFEVDGQEYLIISPMRYQKDGNDFININSNIFVTGHVDWDKKVFVAESFKEIDHGHD
                     FYAAQTTEGPEGERVMVAWMHTWGRKLVTNDLGHKWYGQMTLPRILKKTENGLHQVLP
                     TSVLEAFKDIEIGQSIQGPSKLSLKLDDSLDLKLGTDRDYLQFGYDKAKQEVYIDRSS
                     LKIQQVGEEEWSTVRRAVTVQATELEVLVDTNCLEIFINDGQETLTSTFYVEGQIILN
                     AL"
     gene            complement(4364..5974)
                     /locus_tag="U1021_000726"
     CDS             complement(4364..5974)
                     /locus_tag="U1021_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000669747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4711293.1"
                     /translation="MKHTFGKTVVTLLASTVLLAACGSKNTASSPDYELKDVQFPLEK
                     SVTLKFMTASSPLAPADPNDKLIFQRLEEETGVHIEWTNYQSDFGEKRNLDIASGDLP
                     DAIHNDGASDVELMNWAKQGVIVPVEDLIDKHMPNLKKILDENPEYRSMITAPDGHIY
                     SFPWIEELGEGKESIHTVNDIAWINKEWLNKLGLEMPKTTDDLIKVLEAFKTQDPNGN
                     GKADEIPMGFINGGGNEDFKILFGAFGVGDNDDHLVVSNDGTVDFTADNEDYKEGVEF
                     MRTLQEKGLLDPEAFEQDWNTYIAKGSENLYGVYFTWDKANITGMNDTYDILPVLAGP
                     DGTKHITRTNGMGFQRDRMVITSANQNLELTAKWIDAQYAPLQSVQNNWGTYGDETQQ
                     NIFELDKATNSLKHLPLDGTAPGELRQKTEVGGPLAILDEYYGTVTTMPDDAKWRLDL
                     MHATYLDYVTNDDIYPRVFMEQEDLDKIAQVEADMNDFIYRKRAEWIVNGGIEEEWDS
                     YLKELESYGLSDWLAIKQKYYDQYKENQ"
     gene            complement(6021..6908)
                     /locus_tag="U1021_000727"
     CDS             complement(6021..6908)
                     /locus_tag="U1021_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM4711294.1"
                     /translation="MNTQMYTKFDKRMLIVNKILLAFLVLITVVPMVYILVASFMDPQ
                     ALVSKGISFDPKDWTVEGYQRVFSDKSILRGFFNSLFYSFSFAFVTVAISVMTAYPLS
                     KKDLVGKKWINAFLVFTMFFGGGLVPTYLLVKDLGMLNTVWAIIIPGAVNVWNIILAR
                     TYFQGLPDELVEAAVMDGANEFQIFWKIMIPLAKPIMFVLFLYAFVGQWNSYFDAMIY
                     IKDPDLEPLQLVLRKILIQSEPAKDMIGAQAAMNEMKRIAEMIKYATIVISSLPLIVM
                     YPFFQKYFDKGIMAGSLKG"
     gene            complement(6918..7838)
                     /locus_tag="U1021_000728"
     CDS             complement(6918..7838)
                     /locus_tag="U1021_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM4711295.1"
                     /translation="MKTSKLQQASLFDRIKQQKLLLLMLLPGLVLTFIFRYIPMYGVL
                     IAFKDYNPLKGVLGSEWIGFEEFTKFLSSPNFGTLLANTLKLSVYGLLLGFLPPIILA
                     IMLNQLLSDKAKKRIQLVLYAPNFISVVVIVGMIFLFFSVGGPVNSILGMFGIEANFL
                     TDPDFFRPLYILSGIWQGMGWASTLYTATLVNVDPALIEAAKLDGANIFQRIWHIDLP
                     ALKPVMVIQFILAAGGIMNVGYEKAFLMQTSLNLTSSEIISTYVYKIGLVSGDYSYST
                     AVGLFNALINIILLIAVNKIVKRINDGQGL"
     gene            complement(7993..8982)
                     /locus_tag="U1021_000729"
     CDS             complement(7993..8982)
                     /locus_tag="U1021_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM4711296.1"
                     /translation="MEEQKSITMKDVARVAGVSVGTVSRVINNEPGIKESTLEKVNAA
                     IQKLNYIPDVYARGMKKNKTETIALIIPTVWHPFFGEFAYHVEVELSKKNYKLLLCNI
                     SGPKRELDYLTMLQQNKVDGIIAITYSPIDDYLSSNIPFVSIDRVYENKDIACVSSDN
                     RAGAELAANTLIAKGGRHFAFIGGHNKTINETKKRRLYFEKRILEAGFPCHVLDLEEP
                     YDDFVGQVEEFLVNNPQVDAIFTINDFTALDTLAVLEKLGRRVPEDVQVIGYDGIQLA
                     SEKSLALSTIRQPLESMAQEAVACLIDIIEKRERPLQVTLPISYLEGKTTKNF"
     gene            complement(9139..9684)
                     /locus_tag="U1021_000730"
     CDS             complement(9139..9684)
                     /locus_tag="U1021_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711297.1"
                     /translation="MSLQNRVEEMYKDHEVKPYISPERDLAAWLLEAKPVPKRNMVRL
                     EEGILPGDIILLWRISLGSFETTTPYSKYFEYMYGINGPAHMEQLIADGYAYVESAFD
                     SLDHITSTAKKNILKAEGVTGLSKMKAAALDTALKDNLTEEKLAPYFTVRGYALTEKG
                     RAALDNHPEVLAKHPMKKMYK"
     gene            complement(9685..10062)
                     /locus_tag="U1021_000731"
     CDS             complement(9685..10062)
                     /locus_tag="U1021_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase/bleomycin resistance/extradiol
                     dioxygenase family protein"
                     /protein_id="HEM4711298.1"
                     /translation="MIQSIGQVMLYVNDIEASAQFWKEKMGFERVEKQVQGPQTSYII
                     APKSDSEVQFVLHDKAEVAEMEPELNLGTPSILMTSVDVAKTYEELVERGVTTNPVMD
                     LGFMKVISFADNDGNYYAIREVK"
     gene            complement(10147..10500)
                     /locus_tag="U1021_000732"
     CDS             complement(10147..10500)
                     /locus_tag="U1021_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2500 domain-containing protein"
                     /protein_id="HEM4711299.1"
                     /translation="MFENLFDPDGSLVWHTALFYSFSAIILAIVCFHIIKNFMEWHHN
                     NRAPKESCKAKLVSKRTHVFGNEVARTNYYVTFEWEGKRQEFRLRSDEYALLAEGDVG
                     TLHFQGTRFLGFERL"
     gene            10643..11446
                     /locus_tag="U1021_000733"
     CDS             10643..11446
                     /locus_tag="U1021_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEM4711300.1"
                     /translation="MKKILALALASSILLTACTNNSTANSSSSTASSSSPSSTTTADT
                     TASSQYAKDLAYAINNPKATFPQLSNEIGENEAAVKIKTTEGDITIKLFPEQAPLTVE
                     NFLTHAKEGYYNGTIFHRVIKDFMIQGGDPLGNGTGGESIWAGKDTTIDAGNGFKDEI
                     SAFLYNIRGSLSMANAGAGTNGSQFFINQNTTDMSSQLSSSSYPGKIIDAYKNGGNPN
                     LDGKHTVFGQVIEGMDIVDKIASVETDNSDKPKTDVKIESIEILKDYTF"
     gene            complement(11857..13401)
                     /locus_tag="U1021_000734"
     CDS             complement(11857..13401)
                     /locus_tag="U1021_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011681503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEM4711301.1"
                     /translation="MLLQEEIKKRRTFAIISHPDAGKTTITEQLLYFGGEIREAGTVK
                     GKKTGNFAKSDWMDIEKQRGISVTSSVMQFDYAGKRVNILDTPGHEDFSEDTYRTLMA
                     VDAAVMVVDSAKGIEAQTKKLFEVVKHRNIPVFTFINKLDRDGREPLDLLQELEEVLG
                     IASYPMNWPIGMGKSFEGLYDLHNKRLELYRGDERFASLDEGDKLFGSNPFYAQVLDD
                     IELLAEAGNEFSEQAILDGDLTPVFFGSALTNFGVQTFLDTFLEFAPEPHGHKTTTGD
                     VIDPLNKDFSGFVFKIQANMDPRHRDRIAFVRVVSGEFERGMAVNLPRTGKGAKLSNV
                     TQFMAESRENVENAVAGDIIGVYDTGTYQVGDTLTVGKNKFEFEPLPTFTPEIFMKVS
                     AKNVMKQKSFHKGIEQLVQEGAIQLYKNYQTGEYMLGAVGQLQFEVFKHRMEGEYNAE
                     VVMTPMGKKTVRWIKPEDLDERMSSSRNILAKDRFDQPVFLFENDFALRWFADKYPDV
                     ELEEKM"
     gene            13638..15974
                     /locus_tag="U1021_000735"
     CDS             13638..15974
                     /locus_tag="U1021_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HEM4711302.1"
                     /translation="MNKQIKGLSTKEVQERIQNQQTNHFKTKTCASNWEIFRRNVFTS
                     FNALNFAIFLALLAVQAWSNLFFFGVIVLNAVSGMLTEWRARRMIDKLNLMNKDFIRV
                     VRDSETISIAPEDIVLDDVLLLSAGEQVPSDAIVLEGIAEANEAMLTGESDLIVKNTG
                     AELLSGSYLVSGQIYAKVIHVGAENYANKLMLEAKTHKPIVSRILYNMDKIAKFTGKI
                     IIPFGLALFLEAFFIKLLPLKDSVITSSTALLGMLPKGIALLTITSLLTAVIKLGMKN
                     VLVQEMYSVETLARVDVLCLDKTGTITQGKMTVENLLPLTNHYSLDTIQQILATYIQT
                     SEDTNSTAQAIRKEYGDLEHHYKASHIIPFSSDRKWGAMTIENIGHIFLGAPEMLLTQ
                     NPPSVSEAQARGSRVLILALSQQSLPSSQNQLPENIEPLALLEIADPIREDATETLAY
                     LRSQEVTLKIISGDNPVTVSHIAREAGFADYDSYIDCSKVDDEELIARAETTAIFGRV
                     SPHQKKLLIQTLKAQGHTTAMTGDGVNDILALREADCSIVMAEGDPATRQIANLVLLD
                     SEFRDIPEILFEGRRVVNNISHIAPIFLIKTIYSFLLGLICIASIALGKAEYLLVFPF
                     IQVQMTLIGQFVEGFPPFILTFERNIRPVEKHFLRKSLLLALPNALMVVLSVLIFHLM
                     QVFGYLNLHDMQTLSYYVLGSTGLLAVIRACLPLTKARLALIIYSVFGFFISSHFLHG
                     LIEIHPLNSHTLPIYSGLMLIIIPVFFWISYKQGAFKN"
     gene            complement(16005..16703)
                     /locus_tag="U1021_000736"
     CDS             complement(16005..16703)
                     /locus_tag="U1021_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02206 family membrane protein"
                     /protein_id="HEM4711303.1"
                     /translation="MSDFFSNQISEAPNLNVLEHLFLMIIWFFMLHLCFRCYQKRWFH
                     IVFWWLQFIQIVSLYTWYIVADSPLSESLPFYHCRLAMLFILWAKPGPLKRYFAYLGL
                     FGSLAAFIHPVFDPFAFPHLTFFTFVIGHYALTVNCMLYLLSDLEGEMLKGKEVVKYT
                     LIMNMLILGVALLTGGNYGFLRQAPLVNTNNLPLNFFLVTCLLCFSILSIQAMLIAYL
                     KKESKQMNSHILKK"
     gene            complement(16794..18155)
                     /locus_tag="U1021_000737"
     CDS             complement(16794..18155)
                     /locus_tag="U1021_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEM4711304.1"
                     /translation="MKLTLHEVAQVLGAKNDISLYPDRALNKVEFDSRLITEGDLFVP
                     LKGARDGHDFIPVAFENGCAVTLSEVSLDVPHILVDDCLAALQQLAAYYLEKTGVEVI
                     AVTGSNGKTTTKDMIHDVLATTYKTYKTQGNYNNEIGLPYTVLHMPEDTEKLVLEMGQ
                     DHLGDIHLLSEIAKPSLSVITLFGEAHLEFFGSREEIAKGKLQIADGMEPGSKLLIPA
                     DPIADKLLPSHVDLIRFGEQADLQVTSLVESKDSLTFTVNFMDGDIFLPVTGKYNATN
                     AMVASYVGKTLGVPDKAIKSALAGLNLTRNRTEWKKAANGADILSDVYNANPTAMRLI
                     LETFSSIPANEGGKKIAVLADMKELGSQSVDLHNQMILSLSPDVLDTIIFYGQDIEGL
                     AQLASQMFPIGKVYFFRKNAEQDQFEDLVKQVRESLGKEDQILFKGSNSMNLGKVVEA
                     VEK"
     gene            complement(18284..18664)
                     /locus_tag="U1021_000738"
     CDS             complement(18284..18664)
                     /locus_tag="U1021_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEM4711305.1"
                     /translation="MYQTTVKGEGLFQALSQGYGEPVRTFGVTEKGETPVSLVNIGLA
                     ACITMCVQGYYASQEGNKTMPVQVESRLDNQRFEVLIGIGESVSAQKQKEILAYVEKK
                     CKVKALLREDLQFETSFYVLESVE"
     gene            complement(18752..19798)
                     /locus_tag="U1021_000739"
     CDS             complement(18752..19798)
                     /locus_tag="U1021_000739"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEM4711306.1"
                     /translation="MSKETLILLYGGRSAEREVSVLSAESIMRAINYDKFFVKTYFIS
                     QTGDFIKTQEFSQTPSADEKLMTNATIVEEQKIRPSDIYEEKAVVFPVLHGPMGEDGS
                     IQGFLEVLRLPYVGTNILSSSVAMDKITTKRILESAGISQVPYVAVIEGENIDEKIAE
                     IEGKLTYPVFVKPANMGSSVGISKAEDLAGLRKALDLAFKYDSRVLVEQGVNAREIEV
                     GILGNADVKTTLPGEVVKDVAFYDYDAKYIDNKITMEIPAKIDESIMDIMRDNAANAF
                     RAIGGCGLSRCDFFLTEDGDIFLNELNTMPGFTQWSMYPLLWDNMGLAYPDLIEELVG
                     LAKEMFEKRESHLI"
     gene            complement(19903..20499)
                     /gene="recR"
                     /locus_tag="U1021_000740"
     CDS             complement(19903..20499)
                     /gene="recR"
                     /locus_tag="U1021_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEM4711307.1"
                     /translation="MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMEDDVVNEFA
                     KNLLAAKRDLSYCSICGNLTDQDPCAICQDSTRDQSTILIVEDSRDVTALENIQEYHG
                     LYHVLHGLISPMNGIGPDDINLKTLLTRLMDNEVTEVIVATNATADGEATSMYISRVL
                     KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL"
     gene            complement(20508..22583)
                     /locus_tag="U1021_000741"
     CDS             complement(20508..22583)
                     /locus_tag="U1021_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEM4711308.1"
                     /translation="MKKRKNKPLEHDGNFISLRLNILFSIVIFLFLVLILRLADMQII
                     NHDFYSNKLSTASQKIISNGSIRGQIYDAQGKPLVENEIQQVVSFTRPNKMSAQEMKE
                     VANKLLQWVNVSDVTITQRDKADYYLADEEVYRQVVEALPKDKKYDSDGNYLSESTIY
                     SNAVDSIPAEALQYSEQDNKAIELFKQMNGATYFSTVNLVTDTLTSEQVAHIVANESQ
                     LPGISTTNNWQRTILPTSLSSIIGTVTSEQAGLPAEDAEYYLSKGYSSNDRVGTAYLE
                     KQYEEVLQGQREKKQINLDRNGNIESIETIQEGQQGNNIKLTIDLAFQDGVNAILRKY
                     FESELATGSALYSEGVYAVALNPSTGAVLAMSGYSHEKGSSTITEDALGTITSVFTPG
                     SIVKGATISSGWENGVISGNQVQLDEPIYFAGSAPITSWYGAYVSFNIDATEALEYSS
                     NAYMVKIALGLLGQTYSANMYLNDGDTLTNAMTKLRSTFAEYGLGASTGIDLPLESTG
                     FLPEEYSTANFITNAFGQFDNYTPMQMAQYAATIANNGTRISPHLVEGIYGNNAQGGL
                     GELIETVSGKEMNQVNISAEDMSLLRQGFYQVVNGGGRFNTGSAIGRGAAVTISAKTG
                     TAETYTTTASGDVVTAINTNVVAYAPSDNPQIAVAVVLPNLTNQSSTTTKIITQEIIN
                     LYQSLHPMN"
     gene            complement(22675..>23102)
                     /locus_tag="U1021_000742"
     CDS             complement(22675..>23102)
                     /locus_tag="U1021_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM4711309.1"
                     /translation="SQAVEPSSWSKGWFAQDLINLDEEKAAFENVSCTSLQDRMTILN
                     LLGMLGLSYDKAQQKVANLSGGERVRLSLAKVLLADANLLILDEPTNFLDMAAIEALE
                     TFLKEYEGSVLLVSHDQQFVETSVHSQWEIVQACLVKKS"
BASE COUNT         6618 a         5204 c         4504 g         6776 t
ORIGIN      
        1 agaactgacc ttcatcaaat caagtcaaca gcgtatgatt ttgattttct aagagtatta
       61 attagttgtc atattgatag gcctctctgg gcatgaaaag atggacttat tcatgaattt
      121 ctagagggag gccatctgga tcaaagaaga aggccatttt tttaccatca aaatcatctg
      181 ttcgcaggac ttcatgtcgg atgtccaaac ggtcaaattc ttccagacag gcttccacat
      241 ctgcaacctg gaaggctaga tggcgtaggc ctgtatgttc aggattgggc agggcaggac
      301 gaagtggagc atccggtttg atgaaaattt ctaaaattat atttcctttt ttgacattga
      361 aaagaatgtc atttttttct ggtcggatat gttcatccac ctgttcaaag cctagtttct
      421 caacataaaa ttctcttgtc ttgtcatagt cactaccgat aattgcaata tgatgaactg
      481 catcaaattt cattattgtg tttccaatac ctttctaggt tttgttcctt cagctggacc
      541 aatgacaccc gctgcttcta gctcttccat gaggcgtgtt gccctgttaa aaccaacaga
      601 caagcgtcgt tgaatcatag aggcgctggc tttttgtgtc tcaactacca aggcacgtgc
      661 ttcgttgaaa agtggatctc ctccagcatc accaaaacct gcatcgccat caccttctgc
      721 cacttcacct ggatcaaagg attcatcata atctgcatct gcttgatcct tgataaagcc
      781 aactattgct tctacatcat catcggatat aaaagaacct tgcaagcgga ctggatggtt
      841 ttcatcaatc ggtttaaaga gcatgtcacc gcgacccaag agtttttcag caccgttttc
      901 atctagaatc gtccgactgt ctgtaccgct tgatacggca aaagcgatac gagatggtac
      961 attggcttta atcaaacctg aaataacatc aacagatggt cgctgggtag caagaatcat
     1021 gtggatacct gctgcacgag ccttctgtcc caagcgaata atggcatctt ccacttcctt
     1081 gctggctacc atcatcaagt ctgccaactc atctacgatt accacaatga gaggaagtgg
     1141 aatctgtttt tcttctgaac ggctattaaa ttcttcgacc ttcgcattat aaccttccaa
     1201 gtttcggaca ccgatctggc taaacaactc atagcgtttc tccatttcat ccactacttt
     1261 ttgaagagct cgagcagcct tgcgtgggtt ggtcacaacg ggaatcaata ggtggggaat
     1321 atcattatag accgataatt cgaccatttt ggggtcaatc atcatgaact taacttggtc
     1381 tggaccagct ttcatgagaa ttgaagagat gataccgttg acagcaacag acttccctga
     1441 accagttgaa ccagccacca ataaatgggg catacgtgct aggttaaagg aacggacgga
     1501 gccattgaca gccttaccga gaggaatttc cagaagcttg tctgggtctg ttttagattg
     1561 ttcccagagc tcacggaaag gtactgtagc cacttcggag tttggaactt caataccgac
     1621 cagtgatttt cctgggatag gagcttcaat acggacatct ttagccgcaa gggctagagc
     1681 caaatcatca gccaggttag aaatccgatt gacacgaacg ccgactgctg gtttgacttc
     1741 atacttggtt accgatggtc caatctcagc acactcaact actaccttga ttccaaaact
     1801 ggcaaaggtg tcttctaaaa ctttaatatt ctgacgaaca attcgttttt cattggactg
     1861 actcttagct ttaataggag caaataagtc tatggacgga agtttatatg ctagtctctg
     1921 cttaggcttg aaatcaatct gcacatctgt ctcgtccttc tcaaactcat ttggttcaga
     1981 atcctggctt gccgagtttg attgtgctgg ttggtcatct tctgccaaca taattggaaa
     2041 ttcatcttct atgtctaagt ggtcatattc tgaaataatc ggtacttgaa caggctcttc
     2101 ttcgaggatt tcacccgttt ctaaatcgac atgtctatct accagtgcca aagcccgagc
     2161 tgactcttcc tcttcctcta gacgaaggcg ttcctcttct agacgagcta attcttgctg
     2221 acgtttttct tctcgttctg cttttttctg tgttcgaagc tctgctcttt ttacctgcgt
     2281 ctccaccaac ttatctttgg caaccgccaa gccatcggca acatcataaa cagaccatgg
     2341 gcttacaaaa aagataccaa atgctatcac tagaagaccg atgaagaagg aaccgacatt
     2401 tgcaaagagg aaggagactg gcagatagaa gatacttcca atcatccctc cgcctagaaa
     2461 tgctgttacc tgaaacttag ctaggtctga caaggccaat tttagagtat gaccgaataa
     2521 gtcactccct tgataggtcc agtctaagta agcctgaaat tcaatcaata acccaataac
     2581 aatcagccag aagcccgata tggtcccttc tctttcgcgt aagactttgg gaatgagaag
     2641 gtagataaat gcacccgcca ataatagata ggccagacta ccaaataata gccggaaaat
     2701 attgtagctg gtcactccaa acacacctag gcgactggct gcaaaggcaa tgaataaaag
     2761 ccccaatact cgaagggtga tatttttaac acgttcttgc tgtgctaatt ctgccttggt
     2821 tggtcgcctc gtagcctttc cttttttact tgtctttctc atagatacct caactttctc
     2881 aatctcttta ttctatcata attgggaaga attttcatga tagaaaaaac cctgaaaata
     2941 cagggtttct cttggagtga aagaataatt taagagggca aataatatta tagagcgttt
     3001 agaataatct gaccttctac gtagaaggtt gatgtcaagg tttcttgacc atcgttaata
     3061 aagatttcca aacagttggt gtcaaccaag acctctagct ctgtcgcttg aaccgtgacc
     3121 gctcgacgaa cagttgacca ttcctcctca ccaacttgct ggattttgag agagctacgg
     3181 tcaatataga cttcttgttt ggctttatca tagccaaatt gaagatagtc tcgatcagtc
     3241 cccagtttca agtctagact gtcgtccagt ttgagggaaa gcttacttgg tccttggata
     3301 ctttgtccaa tttcaatatc cttgaaggct tccaagacac ttgttggcag aacttggtgc
     3361 aatccgtttt cagtcttctt gagaatgcgt ggaagagtca tctgaccgta ccacttatgg
     3421 cctaggtcat tggtcaccaa cttgcgtccc caggtgtgca tccaggctac catgacacgt
     3481 tccccttctg gaccttcggt agtctgggca gcatagaaat catgaccatg gtcaatttct
     3541 ttgaaggatt ctgccacaaa gaccttctta tcccagtcca catgacctgt cacaaagatg
     3601 ttggagttga tattgataaa gtcattcccg tctttttggt aacgcattgg agagataatc
     3661 aggtactctt gaccgtccac ttcaaagtag tcaggacatt cccagacaaa gccttggttg
     3721 acctcacctt tcaagaagat agactcaaat ttccaatccg tcaggttggg agagctgagt
     3781 aagacgatac agccgacatt atccttgtgc ttggttgcga caacagagta gtagtgacca
     3841 tctttctcaa aaatcttcgg atcgcggaag tcattggcaa tcacttcttc tggcagtcca
     3901 tctgcggttg cgactggatt ctgctcgatt ttttcaaagt gaataccgtc agttgagaag
     3961 gccatgttct gaacttggct aactgtcccg tcttcattgt tgatatgacc ggtatacatg
     4021 agccatagaa catcatcttt gacaatggca gagcccgaga aacagccgtc cttatcgtag
     4081 tccttgtctg gagcaagggc aactggaagg tgttcccagt tgaccaagtc cttacttttc
     4141 gcatgacccc agtgcatcgg tccccaaaca ctttcgtaag ggttgaattg gtagaacaaa
     4201 tggtattctc cacggaagta gataaatcca ttggggtcgt ttatccagcc tgtttctggt
     4261 gttaaatggg cttgcggttt gaaaatcgga ttgacgtttc ctttttctgt ctgaataaat
     4321 tgattggctt ctactactgt tttcacaggc agcctccttt tgattactga ttttctttat
     4381 actgatcgta gtatttttgc ttgatagcta accagtcaga aagaccatag ctttccaact
     4441 ctttcaagta gctatcccac tcttcttcga taccaccgtt tacaatccat tctgcacgtt
     4501 tacggtagat gaagtcgttc atatctgctt caacttgggc aatcttatcc aaatcttctt
     4561 gttccatgaa gacacgaggg tagatgtcat cgtttgttac atagtcaagg taggtcgcat
     4621 gcatcaaatc caaacgccat ttagcgtcat ctggcatggt tgtcacagtt ccgtagtatt
     4681 catcaagaat agccaacggt ccaccaactt ctgtcttctg acgaagttca cccggtgcgg
     4741 taccatctaa tggcaagtgt ttcaaactat tagttgcttt gtcaagttca aagatatttt
     4801 gttgggtttc atcgccatag gtaccccagt tgttttgaac agattggagc ggagcgtatt
     4861 gggcatcaat ccatttagca gtcaattcca agttttggtt agctgaagtg atgaccatgc
     4921 ggtcgcgttg gaagcccatg ccgttagtac gagtgatgtg cttggttccg tcaggacctg
     4981 ctaagacagg taagatgtca taagtatcgt tcatacctgt aatgttagct ttatcccaag
     5041 tgaagtaaac accatataga ttttcactac ctttggcaat gtaagtattc caatcttgtt
     5101 caaaggcttc cggatctaga agaccttttt cttgaagggt acgcataaat tcaacacctt
     5161 ctttgtagtc ttcattgtcc gctgtgaagt caacagttcc gtcattgcta acaactaagt
     5221 gatcatcatt atcaccaaca ccgaatgccc caaaaagaat tttgaagtct tcatttcctc
     5281 caccattaat gaagcccatc ggaatttcat ccgccttgcc atttccgttt ggatcttggg
     5341 tcttgaaggc ttcaaggacc ttaatcaagt catccgttgt ttttggcatt tcaagaccga
     5401 gtttgttcaa ccattctttg ttgatccaag caatatcgtt aacagtgtgg atagactcct
     5461 tgccttcacc taactcttca atccatggga atgagtagat atgaccgtct ggagctgtaa
     5521 tcatggaacg gtattctgga ttttcatcca aaattttctt gaggtttggc atatgcttat
     5581 caatcaagtc ttcaactggt acgataaccc cttgttttgc ccagttcatc aattccacat
     5641 cagaagcccc gtcattatgg atggcgtctg gcaagtcacc tgaagcaatg tccaaattcc
     5701 gcttttcacc aaagtcagac tggtagttgg tccattcaat atgaacgcca gtttcttcct
     5761 caagacgttg gaaaatcaac ttatcatttg ggtctgctgg agctaggggg gagctagctg
     5821 tcataaactt aagcgtaact gatttttcaa gtgggaattg aacatctttt aattcataat
     5881 cagggcttga tgcagtattt tttgagccac aagcagccaa caacacggta cttgctagaa
     5941 gcgtaacaac tgtttttcca aatgtgtgtt tcatcagaaa caacctcctg ttttgttttc
     6001 tataaaaatt ttgaacaatt ttaacctttt aatgaaccag ccatgatacc cttatcaaag
     6061 tatttctgga agaatggata catgacaatg agtggcaagc tagagatgac aatggtcgca
     6121 tacttaatca tttctgcgat gcgtttcatt tcattcatgg cagcctgggc tccaatcatg
     6181 tccttagcag gctcgctttg aatgaggatt ttacgaagta ctagttggag tggctccaag
     6241 tctgggtcct tgatgtaaat catggcatca aagtaagaat tccattgacc tacaaaggca
     6301 tataggaaaa gtacaaacat gattggctta gctagtggaa tcatgatttt ccagaaaatc
     6361 tgaaattcat tggcaccgtc catcactgcc gcttctacca actcatctgg caagccttgg
     6421 aaataggtcc gtgccaagat aatattccaa acattgactg caccaggaat aataatggcc
     6481 caaacggtgt tcagcattcc caaatctttg accaagagat aggtcggaac aagtccgcca
     6541 ccgaagaaca tggtgaaaac gagaaaggca ttgatccatt tttttccaac caaatctttt
     6601 ttagagagcg ggtaggcagt catgactgag atagccacgg tcacgaaggc aaaggagaag
     6661 gaataaaaga gggagttgaa aaatccgcgt aggatagact tgtctgaaaa tacccgttga
     6721 taaccttcta ctgtccagtc ctttggatca aagctaattc ccttgctgac caaggcctgc
     6781 ggatccatga aggatgcgac taagatatag accataggca caactgttat gagaacaaga
     6841 aatgccagca agattttatt gacaatcagc attcgcttgt caaattttgt gtacatttgt
     6901 gtattcatac gaacctccta taagccttgt ccatcgttga tgcgtttgac aatcttattg
     6961 actgcaatca gcagaataat attgataagt gcgttaaata agccaaccgc tgttgaataa
     7021 gagtagtcac ctgacaccaa accgatttta tagacatagg ttgagatgat ttcagaactg
     7081 gttaggttga gggaggtctg catcaggaag gctttttcat agccaacgtt catgatgccc
     7141 ccagctgcta agataaactg aatgaccata actggtttta gtgcaggcaa gtcaatatgc
     7201 cagatacgtt ggaagatatt agcaccgtct agcttagccg cttcaatcaa ggctggatca
     7261 acattgacca aggtagccgt gtagagagtc gatgcccagc ccattccctg ccaaatacca
     7321 ctgaggatgt agaggggtct gaagaaatca gggtctgtca ggaagttggc ttcaatgcca
     7381 aacataccta ggatggaatt gaccggtcct cctactgaga agaagaggaa aatcataccg
     7441 acaatgacca cgactgagat aaagtttgga gcgtagagca ccaactgaat ccgtttttta
     7501 gccttatcgc tcaatagttg gttgagcatg atggccaaaa taatgggtgg gagaaatcct
     7561 aggagtaggc cgtagacact caatttcaag gtgttggcaa gtaaggtgcc gaaatttgga
     7621 gaagagagaa acttggtaaa ctcttcaaac ccaatccact cactaccaag cacccctttt
     7681 aaaggattat agtctttaaa ggcaatcaac actccgtaca taggaatgta acggaagatg
     7741 aaggtcaaga ccaagcctgg tagtaacatc agtaacaaga gtttctgttg cttgattcta
     7801 tcgaatagac tagcttgttg cagttttgat gttttcataa gaactccttt ttgaaacgtt
     7861 tcaaatttat tgattttaga aagaggatgt gaacctcttt ttgaaacgtt tcatttttct
     7921 tgtaaaaata aaaccaactg tttattgatg attttatttt atcattgtaa ccgttttctg
     7981 tcaactgctt ttttaaaaat tttttgtagt ttttccttca agataggaaa tcggtagagt
     8041 gacttgtagg gggcgctctc ttttctcaat aatatcaatt agacaggcaa cggcttcctg
     8101 ggccatagac tccaaaggtt gacgaatggt cgaaagggct aaggattttt cacttgccaa
     8161 ctgaatacca tcatagccaa tcacctgcac atcttctgga acccgtcgtc ccagtttttc
     8221 caaaacagca agtgtgtcta gggccgtaaa atcattgatg gtgaaaatag cgtcaacctg
     8281 tggattgtta accagaaact cttcgacttg accaacaaag tcatcatatg gctcttccaa
     8341 gtccaagaca tgacaaggaa aacctgcctc taaaatccgc ttttcaaaat acaatctacg
     8401 cttcttggtt tcattgattg ttttattgtg cccaccgata aaggcaaaat gacgaccacc
     8461 ttttgcaatc aaggtattcg ctgccagttc cgcaccagct cggttgtccg aactgacaca
     8521 ggctatgtcc ttgttttcat aaacacgatc gatactgaca aaggggatat tggacgatag
     8581 ataatcgtca atcgggctat aagtgatagc aataatgccg tccaccttat tttgctgcaa
     8641 catagtcaga taatccaatt ccctttttgg accagaaatg ttgcaaagga gcaacttgta
     8701 atttttctta ctcagttcca cttcaacatg ataggcaaat tctccaaaaa aaggatgcca
     8761 aactgtcgga ataatcaagg cgatggtttc ggttttgttc ttcttcatgc cacgagcata
     8821 aacatctgga atgtaattta atttctgaat ggcagcattg actttttcaa gcgtactttc
     8881 cttaatacct ggttcattgt tgataactct tgatactgtc ccaacactga cccctgcaac
     8941 tcgagctaca tctttcatag taattgattt ttgttcttcc atggtttacc cctttctttt
     9001 gaaacgtttc aataatttac actagaatat cattgatagc gttttctgtc aagggaaata
     9061 gacttgttag caaataaaaa cacccaaaaa gctagaatga ttctaacttt tgagtgccgt
     9121 ttaaaaatct tttctatttt atttgtacat cttcttcatt gggtgttttg caagcacttc
     9181 tgggtgatta tcgagtgcag ctctgccttt ttccgtcagg gcataacctc ggacagtaaa
     9241 atatggagct aacttttctt ccgtcaagtt gtccttgagg gcagtgtcaa gggcggccgc
     9301 cttcatcttg gacagaccgg tcacgccttc tgccttgagg atatttttct tggcagtcga
     9361 agtgatatgg tctagggaat caaaggccga ttccacatag gcataaccgt ctgcgatcaa
     9421 ctgctccatg tgagcaggac cattgatgcc atacatatac tcgaaatatt ttgagtaggg
     9481 cgttgtcgtt tcaaaagaac ccaggctaat ccgccatagc aaaataatat cacctggcaa
     9541 aataccttct tctagacgaa ccatattgcg tttgggaacg ggcttggctt ccaaaagcca
     9601 ggctgccaag tcacgctcgg gggaaatata gggtttgacc tcgtggtctt tatacatttc
     9661 ttcaacacga ttctgaagtg acatttactt tacctcacga attgcataat aatttccatc
     9721 attgtctgca aagctaatta ccttcatgaa accaaggtcc atgactggat tcgttgtgac
     9781 accacgttca acaagttctt cgtaagtttt ggctacatct actgatgtca ttaagattga
     9841 tggtgtacct aagtttaatt ctggctccat ttcagcaacc tctgccttat catgaagtac
     9901 aaattgtacc tcactatctg atttaggtgc aataatgtaa gaagtttggg ggccttgcac
     9961 ttgtttttct acacgttcaa atcccatttt ctctttccaa aattgagctg aagcctcaat
    10021 atcattcaca tataacataa cttgtccgat tgattgaatc atcttaaata cctcttttgc
    10081 gttgtacgaa catgtgttca aaccattata cactagatag ggatattctc caaagaaaaa
    10141 cgactcttag agccgttcaa aacctaggaa acgagtcccc tgaaaatgca gagtgcctac
    10201 atctccctct gctaaaaggg cgtattcatc tgaacgaagg cgaaattcct gccgttttcc
    10261 ctcccattca aacgttacat aataattggt tcgtgctact tcgttaccaa aaacatgggt
    10321 tcgtttagag acaagcttag ccttgcaaga ttctttgggt gcccgattgt tgtggtgcca
    10381 ttccataaaa tttttaatga tatggaaaca aactatcgct aatatgattg cggaaaaact
    10441 gtagaaaagg gccgtatgcc atactaggct tccatctggg tcaaacaagt tctcaaacat
    10501 cattattctc cttttacatc tgtaaatata gtatatcata ttattgtttt agatacgctt
    10561 tttatactag ataaaaattg aaaaaatcca tatttcatgg tagaatgagc ataattttga
    10621 acaagacaag aaaggatttt caatgaaaaa aatactagct cttgctctag cttcgagcat
    10681 cttgctaact gcctgcacaa acaactctac agctaatagc tcatcttcta cagcatctag
    10741 ttctagtcca agctcgacta cgacagctga tacaactgct tctagccaat atgccaaaga
    10801 tttggcatac gccattaaca atcccaaagc tacattcccc caactttcca atgaaattgg
    10861 tgaaaatgag gctgctgtta aaataaagac aaccgaaggc gacatcacta taaaactctt
    10921 ccccgagcaa gctccactaa ctgtagaaaa ctttctgact catgcgaagg aaggatacta
    10981 taatggaacg atcttccatc gtgtcattaa ggatttcatg attcaaggtg gcgatcctct
    11041 tggaaatggt actggtggag agtctatctg ggccggaaaa gatactacta tcgatgctgg
    11101 gaatggtttt aaagacgaga tttcagcttt cctttataac attcgtggct cactttctat
    11161 ggcaaatgct ggcgcgggaa caaatggaag tcagtttttc atcaatcaaa atacaacaga
    11221 catgtctagc caactctcta gttctagcta tcctggtaaa atcattgacg cttataaaaa
    11281 cggaggcaat ccaaacttag atggcaagca taccgtattt ggtcaagtca ttgaagggat
    11341 ggacatcgtg gataaaatcg cttcagtcga aacagacaat agcgataaac ctaaaacaga
    11401 tgtaaaaatt gagtctattg aaattctgaa agattacacc ttttaaaaat gaagctgggc
    11461 aagacatcat agatgtcttg cccagcttca tgtattctat catatccttt tatagttatc
    11521 tttatcaagg taaactgact gccgtcagtt cccatctccc gatagcaaac atctcccaga
    11581 agttagtaaa aggtaagctg ataccatcag ctctcatctc ccactagaaa aggttcactg
    11641 aacctcggcg cagtaggcgt caacacatta ctggacgcca ttgcgaggga aaaacgacga
    11701 aatcaagtca actttgttga ttactgatct ctatatagag acgcagtagg tctcggccaa
    11761 tcatccttca cttcgttcgg attcttggga gacccttgcg agggaaagac gacgaaatca
    11821 aatcaacttt gttgattact gatttctgtc tttccgctac atcttctctt ccaactccac
    11881 atcaggatat ttgtccgcga accagcggag agcgaagtcg ttttcaaaaa ggaaaactgg
    11941 ttggtcaaag cggtctttgg ctaggatgtt gcggcttgat gacatgcgtt catccaggtc
    12001 ttctggcttg atccagcgga ctgtcttttt acccattgga gtcatgacta cttcggcatt
    12061 gtactcgcct tccatgcggt gtttgaaaac ttcaaactgg agctgaccaa cggcacccag
    12121 catatactcg ccagtctggt agttcttgta gagctggatt gcaccttctt gcaccagctg
    12181 ctcgattccc ttgtggaagg atttttgttt catgacattt ttagcagaaa ctttcatgaa
    12241 aatttcaggg gtaaaagtcg gcagcggttc gaattcaaac ttgttcttac ctacggtcaa
    12301 ggtatctcct acctgatagg tccctgtatc gtaaaccccg ataatgtcac ccgctactgc
    12361 attttccaca ttctcacggg actctgccat gaactgggtc acgttggaca acttagcccc
    12421 cttgcctgta cgaggcaggt tgaccgccat accgcgttca aattcacctg aaaccacacg
    12481 gacaaaggcg atacggtcgc ggtgacgagg gtccatgttg gcttggattt tgaagacaaa
    12541 gcctgaaaaa tctttattga gcgggtcaat gacatcccct gtcgttgtct tgtgaccatg
    12601 tggctctgga gcaaattcca agaaggtgtc aaggaaggtc tgcacaccaa agtttgtcag
    12661 ggctgagccg aagaaaacag gtgtcaaatc gccgtccaaa atcgcctgct ctgaaaattc
    12721 attcccagct tccgccagaa gttcaatatc atccaaaacc tgtgcataaa atgggttaga
    12781 gccaaagagt ttgtcgcctt catccaagct tgcaaaacgc tcgtcaccac ggtagagttc
    12841 taaacgtttg ttatggaggt catagagtcc ctcgaaggat ttccccatac caatcggcca
    12901 gttcattgga tagctggcaa tgcccaagac ttcttccaac tcctgcaaca aatcaagtgg
    12961 ctcacgaccg tcacggtcca acttgttgat aaaagtgaaa acaggaatgt tgcggtgctt
    13021 cacaacctca aagagctttt tggtctgagc ctcgataccc ttggcagagt ccaccaccat
    13081 gacagccgca tcgaccgcca tcaaggtccg ataagtgtct tctgagaagt cctcgtgccc
    13141 tggtgtatct aggatattga cccgcttgcc tgcatagtca aactgcatga cagatgaggt
    13201 aacagagata ccacgttgtt tctcaatatc catccagtca gacttagcaa agttaccagt
    13261 ctttttcccc ttgactgtac ctgcttcacg aatctcaccc ccaaagtaga gcaactgctc
    13321 ggtaatggtg gttttacccg cgtccgggtg agagataatc gcaaaggtgc ggcgtttctt
    13381 gatttcttct tgtagtaaca taatgtttcc ttttcatttt ttgtattttg attcatagca
    13441 gagctgagct cttatcctat tcgatttaca ttggattcat ccttattctt tactagacaa
    13501 ctctcttatt atatcggaaa taagggaatt tttcaaacta ttgaagaata ggtctacaga
    13561 cctatactat tgtattataa atatgttaca ataagtatga gatgtattct atatactaga
    13621 aaaagaaaga taaaataatg aacaaacaaa taaaaggttt atcaaccaag gaagtacaag
    13681 aacgtattca aaaccagcaa accaatcatt ttaagacaaa gacctgtgcc agtaattggg
    13741 aaatcttcag acgaaatgtg tttacatctt ttaacgcact aaattttgcc attttcttag
    13801 ccttactagc tgttcaggca tggtccaacc ttttcttctt cggagttatt gtcctcaacg
    13861 ctgtttcagg aatgctgaca gaatggcgag cacgacgaat gattgacaaa ctcaacctga
    13921 tgaacaagga ttttatccga gttgttcgcg atagcgagac aatatctatt gcaccagaag
    13981 atattgtctt agatgatgtt ctcttgctgt ctgctggcga acaagttcct agtgatgcta
    14041 ttgttttaga aggtatagcc gaggcaaacg aggccatgtt aaccggtgaa agcgacttga
    14101 ttgtgaaaaa tactggggct gaattattgt ctggtagcta tctagttagc ggacagattt
    14161 acgcaaaagt catccatgtt ggcgcagaaa actatgccaa taagctcatg cttgaggcga
    14221 aaactcacaa acctatcgtc tctcgtattc tttacaatat ggataaaatt gctaaattta
    14281 caggaaaaat tatcattcca ttcggacttg ctctttttct agaagccttt ttcatcaaac
    14341 ttcttccctt aaaagactca gttattacca gctctactgc cctactaggt atgttaccaa
    14401 agggaattgc tctgctgacc atcacctctc tcttaactgc cgttatcaaa ctgggaatga
    14461 aaaatgtcct cgtacaagaa atgtattccg tcgaaacact tgcccgagtt gatgttcttt
    14521 gtttggataa gaccggaacg attactcagg ggaaaatgac cgtcgaaaac ctgctcccct
    14581 taaccaacca ttattcactt gacactatcc aacagatact cgctacctat atccagacaa
    14641 gtgaggatac taattcaaca gctcaggcca ttcgaaaaga atatggtgat ttagagcacc
    14701 actataaagc tagtcacatc atcccatttt ctagtgatag aaaatggggg gcaatgacaa
    14761 tagaaaacat tggtcacatt tttctagggg caccagaaat gttactaaca caaaatcctc
    14821 cttctgtttc tgaggcacag gctcgtggtt cccgtgtcct gattcttgcg cttagccaac
    14881 agtcccttcc ttcttctcaa aatcagctac ctgagaatat tgaacctcta gctctattag
    14941 aaattgctga ccctatccga gaagacgcca cagaaacact ggcctatctt cgctcgcaag
    15001 aagtgacact aaaaataatc tctggtgaca atcctgtgac ggtctcacac attgccaggg
    15061 aagctggatt tgctgactac gatagctata tcgattgttc caaagttgac gacgaagaac
    15121 taattgccag agctgaaaca accgccattt tcggtcgcgt atccccacat cagaaaaaat
    15181 tgctcatcca aaccctcaaa gcacagggac atactactgc aatgactggt gatggggtca
    15241 atgatatcct tgcactacgc gaagctgatt gttccattgt tatggcagaa ggcgatcccg
    15301 ctaccagaca aatcgccaat ctagtcctcc tagattctga atttcgcgat attcctgaga
    15361 ttctctttga gggacgacgc gttgttaata acatctccca cattgctccc atctttctta
    15421 tcaaaacaat ctactctttc ttacttggcc ttatctgtat cgctagtatt gccctaggta
    15481 aagcagaata tttgttagtt ttcccattta ttcaagtaca aatgaccctc attggtcaat
    15541 ttgtcgaagg ttttcctcct tttatcctaa cttttgaacg aaatatccgc cccgtagaaa
    15601 aacattttct cagaaaatct cttctcttag ccctaccaaa tgctctcatg gttgttctca
    15661 gtgtccttat tttccattta atgcaagtat ttggatactt aaacttgcat gacatgcaaa
    15721 ccctctctta ttatgttctt ggttcaacag gtctactggc tgtcattcgt gcctgtttgc
    15781 cactgacaaa agctcgactg gctcttatta tttattccgt tttcggtttc ttcatcagct
    15841 cccatttcct acatggtctg attgaaatcc accccctaaa cagtcacaca ttgccaatct
    15901 attctggatt aatgctcatt attatccctg tctttttctg gattagctac aaacaaggcg
    15961 catttaaaaa ctaaaaataa gacttgaaaa actaatttca agtcttattt tttcaatata
    16021 tgcgaattca tttgtttgct ttcttttttc aaataggcaa ttaacatagc ttgtatactc
    16081 aaaatagaga aacagagtag gcaggttacc aagaagaaat tcaaaggaag attattagta
    16141 ttcactaaag gtgcctgtct caaaaatcca taatttccgc cagttaaaag agctactcct
    16201 agaatcagca tattcataat aagcgtatat ttcactacct cttttccctt caacatctcc
    16261 ccttctaaat cagataacag gtacaacata caattaaccg tcaaggcgta gtgaccaata
    16321 acaaaagtaa agaaggtaag gtgtggaaaa gcaaacgggt caaatactgg atgaataaaa
    16381 gccgcaagcg atccaaaaag accgagatag gcaaaataac gtttcaaagg tccgggcttc
    16441 gcccaaagaa taaaaagcat agccaagcga caatgataaa aaggaagact ctctgaaaga
    16501 ggagaatcag ctacgatata ccaagtataa agggagacaa tctgtataaa ttgaagccac
    16561 caaaaaacaa tatgaaacca tcttttttga taacaacgaa aacaaagatg gagcatgaaa
    16621 aaccaaataa tcatgagaaa cagatgttcc aatacgttca ggttcggtgc ttcagaaatc
    16681 tgattgctga aaaaatcact catcttatta aattcctctc tttccccaaa agtcagtata
    16741 tcaacttttc gatgttttga caagacttgc caaaaaagag aggtctcgcc tctctacttt
    16801 tctactgctt ccactacttt cccaagattc atggaattag agcctttaaa gaggatttgg
    16861 tcctcttttc ctagactttc cctaacctgt ttaaccagat cttcaaattg gtcctgctct
    16921 gcatttttcc taaagaaata gacttttcca atcgggaaca tctgactagc caactgggcc
    16981 agaccttcaa tatcctgacc gtagaaaatg atggtgtcta gcacatcagg cgacaggctc
    17041 aaaatcatct gattgtggag atcaacggac tggctcccca attctttcat atctgccaaa
    17101 acagctattt tcttgccgcc ttcattggct ggaatgctag agaaggtttc caaaatcaag
    17161 cgcatggccg ttgggttggc attgtagaca tcactgagaa tatcggctcc gtttgctgct
    17221 tttttccact cggtacgatt gcgggtcaag ttcagaccag ctagggctga cttgattgcc
    17281 ttatcaggca cacccaaggt cttacccaca tagcttgcta ccatagcatt agtggcattg
    17341 tacttacccg ttactggaag gaaaatgtcg ccgtccataa agttgacggt gaaggtcagg
    17401 ctatctttgg actcgaccag actagtcacc tgcaaatcag cctgctcacc gaagcgaatg
    17461 aggtctacat ggctcggcaa gagcttatcc gcaatcggat ctgctgggat caagagttta
    17521 ctacctggct ccattccatc tgcaatctgt aattttcctt tggcaatctc ttctcgtgag
    17581 ccgaaaaatt ccaaatgggc ttcgccaaat agagtaataa ccgacagact tggtttggca
    17641 atttcagata ggagatgaat gtcacccaag tggtcttggc ccatttccaa gaccagtttt
    17701 tctgtatcct caggcatatg gaggacggtg tatggcagac cgatttcgtt gttatagttg
    17761 ccctgagtct tgtaagtctt gtaagtcgtc gccagaacat cgtgaatcat gtccttggtg
    17821 gtcgttttac cgtttgatcc tgtcacagca atgacttcta cccctgtttt ctctaggtag
    17881 taggccgcta attgttgaag cgcagccaag cagtcatcta ctaggatgtg aggaacatca
    17941 aggctgactt cagacagggt tactgcgcag ccattttcaa aagcaacagg aataaagtca
    18001 tgaccgtcac gtgctccctt gaggggaaca aaaagatccc cttctgtaat caggcgactg
    18061 tcgaactcca ccttgttaag ggctctatca ggataaagac taatatcatt ttttgcgccc
    18121 aagacctgag cgacttcgtg tagggttaat ttcattgttt tctccaataa acttaaaaag
    18181 agctttcgct ctctctatta taccactttt tatcgaactt gagtgaggac accatctttc
    18241 atctcataaa ccttgtcgca tttcttcaat tgctaaaaac atcttactcc acactttcta
    18301 agacataaaa acttgtctca aactgcaagt cttccctcaa aagagctttg actttacatt
    18361 tcttttccac ataggcaaga atctctttct gcttctgcgc tgaaaccgac tcaccaattc
    18421 caatcaacac ctcaaaacgc tgattgtcca agcgactctc cacctgaaca ggcatggttt
    18481 tattgccttc ttggctggca tagtagccct gcacacacat ggtgatgcag gcagctaagc
    18541 caatattaac tagactaacc ggagtctccc ccttctccgt caccccaaag gtacgaaccg
    18601 gttcgccata accttgagaa agagcctgaa acagaccttc cccttttact gtcgtttgat
    18661 acataaatac ctccagaact tgctccattt tattcctttt tgcaaacctt tgcaagaaaa
    18721 aagattggaa tgattccaat cttgataata attaaatgag gtgactttca cgtttttcaa
    18781 acatttcttt ggccaagcca accaactctt caatcaaatc tggataagct aggcccatat
    18841 tatcccaaag gagtggatac atagaccact gggtaaatcc tggcatggta ttgagctcat
    18901 tcaggaagat gtcgccgtct tctgtcagga agaaatcaca gcgagaaagt ccacaaccac
    18961 cgatagcacg gaaggcattg gctgcattat cacgcatgat atccatgata gactcatcaa
    19021 tcttagctgg gatttccata gtaatcttgt tgtcgatgta tttggcatcg tagtcataaa
    19081 aagcaacgtc tttgactact tcgccaggaa gggtggtttt cacgtcagca tttcccaaaa
    19141 taccgacctc aatctcacgc gcattaaccc cctgctcaac gaggacacgg ctatcatact
    19201 tgaaggccag atcaagtgcc ttacgcaagc cagctaaatc ctcagctttt gagataccga
    19261 cacttgaccc catattagct ggttttacaa agactggata agtcaatttc ccttcaatct
    19321 ctgcaatctt ttcatcaata ttttcaccct cgataactgc cacataaggt acttgggaga
    19381 ttccagctga ttccaaaata cgcttagttg taatcttgtc catggcaacg ctggaagaca
    19441 agatattggt accaacatac ggcaaacgaa gcacttccaa gaagccttga atagatccgt
    19501 cttctcccat tgggccatga agaacaggga aaacaaccgc cttttcttca taaatatcgc
    19561 tcggacggat tttttgctct tcaacaatcg tcgcgtttgt catgagtttt tcatcggcag
    19621 acggtgtttg agaaaactct tgcgtcttaa taaagtcccc tgtctggcta atgaaatagg
    19681 ttttgacaaa aaatttatca taattgatgg cacgcatgat gctttcggca gacagaacag
    19741 atacctcacg ctctgcagaa cgcccaccat atagtaaaat caaggtttct tttgacatat
    19801 attttccttc ctgtatcaac gctattactc ttagtatagc ataatttaac aaatcatatc
    19861 tatcctatct taaaattagg aacgtatcta actacagagc agctatagct ctgtgcgatt
    19921 ttcaatagcc ctcaacaggg tcacttcatc tgcatattca atatcactgc ctaccgctaa
    19981 gccacgagct agtcgggtta ctttgattcc cgcaggtttg aggacacgtg agatatacat
    20041 agatgtagcc tctccatctg ctgttgcatt ggtcgccaca ataacttctg taacctcatt
    20101 gtccatcagg cgagtgagga gggttttcaa attaatatca tctggtccga taccattcat
    20161 gggagaaatc aagccatgca agacatgata aagaccgtgg tattcttgaa tattttccaa
    20221 ggctgtaaca tctcgactat cctctacaat caaaatagta gattggtctc gcgttgagtc
    20281 ctggcaaatg gcacaggggt cctgatctgt caaattacca caaatagagc aataagatag
    20341 gtctcgcttg gctgccaata aattttttgc aaactcatta acgacatcat cctccatgcc
    20401 aatagtataa aaagctaaac gggtagccgt ttttataccg atacctggca atttagagta
    20461 gctatcaatt aacttggcaa taggtgtagg gtaaagcata agcctcctta attcattggg
    20521 tgaagtgatt gatatagatt gataatttct tgagtaatta tcttagtagt tgttgaactt
    20581 tgattggtca agtttggtag gacaactgct accgcaattt gaggattatc actaggcgcg
    20641 taggcaacaa cgttggtgtt gatcgcagta accacatctc ctgaagctgt tgttgtatag
    20701 gtttcggctg taccagtctt ggcactgatg gtcacggccg caccacgacc gatagcacta
    20761 cctgtattaa agcgcccacc gccattgaca acttggtaga aaccttgacg aagaagagac
    20821 atatcctcag cggaaatatt aacctgattc atctccttac cagatacggt ttcaattaat
    20881 tctcccaaac caccttgggc attattccca taaattccct caacgaggtg tggagaaatc
    20941 cgtgttccat tattcgcaat ggtcgctgca tactgtgcca tctgcatcgg tgtatagtta
    21001 tcaaactgtc caaaagcatt ggtaataaaa ttggctgtcg aatactcttc cggtaaaaat
    21061 cctgtagatt cgagtggaag gtcaatacct gttgacgcac ctaaaccata ctctgcaaaa
    21121 gtcgaacgaa gcttagtcat ggcatttgtc aatgtatcgc catcattcaa atacatgtta
    21181 gctgagtagg tctgaccaag tagtcccaaa gcaatcttaa ccatgtaggc gttagaagaa
    21241 tattccagag cctctgtcgc atcaatatta aaactaacat aggccccata ccaagatgta
    21301 attggtgctg aacctgcaaa atagattggt tcatctaatt gaacctgatt accactgata
    21361 actccatttt cccaaccaga gctgattgtc gctcctttga cgatggaacc tggtgtaaag
    21421 acacttgtaa tggtaccaag agcatcctcc gtaatagtac ttgagccttt ttcgtgacta
    21481 tatcctgaca tagcaagtac tgcacctgta gaaggattta atgcaactgc ataaacacct
    21541 tccgagtaaa gcgcactacc agtagctagc tcactttcaa agtattttct caaaatagca
    21601 ttgaccccat cttgaaaggc taaatcaata gtcagtttaa tattatttcc ctgctgtcct
    21661 tcttggattg tctcaatact ttcgatattt ccatttctat ctaggtttat ttgttttttc
    21721 tcacgttgac cttgcaagac ttcttcatat tgtttctcga ggtaggcagt tcccacacgg
    21781 tcatttgaag agtagccctt ggatagatag tattctgcat cttctgcagg caaaccagcc
    21841 tgttcactcg ttactgtacc gataatggag ctgagggaag ttggtaaaat cgtccgttgc
    21901 cagttattgg tcgttgaaat gcctggaagt tgactttcat tggctacgat atgagcaacc
    21961 tgttcagaag tcagagtatc cgttaccaaa ttaacagtag agaagtaagt agctccattc
    22021 atctgcttga acagttcaat cgctttattg tcttgctcag aatattgtaa tgcttcggca
    22081 gggatactat caaccgcatt agaataaatt gtcgattcac tcaggtagtt gccatcagaa
    22141 tcgtattttt tatcttttgg caaggcctcg actacctgac gataaacctc ttcatctgcc
    22201 aaataataat cagccttatc acgttgagta attgttacgt ctgaaacatt gacccactgc
    22261 aagagtttat tagctacttc tttcatttcc tgagcagaca tcttgttggg acgtgtgaag
    22321 gagacgacct gctgaatctc gttttcaacc aaaggttttc cttgcgcatc gtaaatctgc
    22381 ccacggatag agccattgct gatgattttc tgactggcag tagacagctt attactataa
    22441 aaatcatgat tgatgatctg catatctgcc aaacgcaata tcaaaactag gaaaaggaaa
    22501 atcacgatag aaaataaaat atttaaacga agggaaataa aatttccatc gtgttccaaa
    22561 ggcttgttct ttcttttttt cacttcaaag acctcattct agaaatatcc ttcttattat
    22621 accacaggca aaaaatattt tttagacaga gcctcctttt cagaaaatat ttccttatga
    22681 tttcttcacg agacaagctt gcactatctc ccattgactg tgaacagatg tttccacaaa
    22741 ctgttgatca tgggaaacca agaggacact tccttcatat tctttcaaga atgtttccaa
    22801 agcttcaata gctgccatat ctagaaaatt tgtcggttca tctaatatca aaagatttgc
    22861 atccgccaac aataccttag ctaaggagag acgaacacgc tcaccaccag acaaatttgc
    22921 taccttctgc tgagccttat cgtaagaaag tcctaacata cctaataaat tgagaatcgt
    22981 catcctatct tgaagagagg tacaactaac attttcaaaa gcagcctttt cttcatcaag
    23041 gtttatcaaa tcctgtgcaa accaaccttt tgaccagctt gaaggctcaa ctgcttggga
    23101 gc
//
LOCUS       DASFQD010000025        22604 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.025, whole genome shotgun sequence.
ACCESSION   DASFQD010000025 DASFQD010000000
VERSION     DASFQD010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 22604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22604
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.025"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            93..1169
                     /locus_tag="U1021_000743"
     CDS             93..1169
                     /locus_tag="U1021_000743"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000542485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEM4711310.1"
                     /translation="MAYVVAVVGATGAVGAQMIKMLEESTLPIEKVRFLASARSAGKT
                     LQFKGQDIVIEETTETAFEGVDIALFSAGGSTSAKYAPYAVKAGAVVVDNTSYFRQNP
                     DVPLVVSEVNAHALDNHNGIIACPNCSTIQMMVALEPVRQKWGLERIIVSTYQAVSGA
                     GMGAILETQAQLRAVLNDGVEPKAVEANILPSGGDKKHYPIGFNAIPQIDLFTENDYT
                     YEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEIAPIDEVKAAIAAF
                     PGAVLEDDVANQVYPQAVNAVGSRDTFVGRIRKDLDKENGIHMWVVSDNLLKGAAWNS
                     VQIAETLHERGLVRPTAELKFELK"
     gene            1242..2177
                     /gene="dapA"
                     /locus_tag="U1021_000744"
     CDS             1242..2177
                     /gene="dapA"
                     /locus_tag="U1021_000744"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEM4711311.1"
                     /translation="MSIQDLRDVKIITAMITPFKEDGSINFEVLPELIEHLLSHHTEG
                     ILLAGTTAESPTLTHEEELELFGAVQKIVNGRVPLIAGIGTNDTRDSIEFAKEVAAFG
                     GFAAGLAIVPYYNKPSQEGMYQHFKTIADASDLPIIIYNIPGRVVVEMTPETMLRLAE
                     HPNIIGVKECTSLANMAYLIEHKPEDFLIYTGEDGDAFHAMNLGADGVISVASHTNGD
                     EMYEMFTAIEQQDIRTAAAIQRKFIPKVNALFSYPSPAPVKAVLNYLGFEVGPLRLPL
                     VPCPEEDAKRIIKVVVDGDYEATKATVTGVVRPDY"
     gene            2546..3898
                     /locus_tag="U1021_000745"
     CDS             2546..3898
                     /locus_tag="U1021_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM4711312.1"
                     /translation="MNIVIIGASFAGLSAALECRKLYQNVQITLIDREKDVAYFPNTL
                     NWKVAGKISGWEEAKISLFSEVQHAAISCLFETECLAVYPEMRKVKIRHHQDIGDIIY
                     DRLILAMGASQTWEWGTEELQDYLIRSKTLSQAQASLEKLTNAKTVAVIGAGQIGLES
                     LDALSQLDLNLHVFEAQDSLLAKYVDEDMIASIRQEMEKRGIQLHLSETVNQITIDTQ
                     EEQLVCHTVTGNYPADLVLPSTNLTPNIQLVKDKLKVTAEGTVWVDEFLETSQENIFA
                     VGDLVSLPVDYFGQAYLPMIHHAIMTGRMAARNLQKRIAPIKRAQRIVSSHVFGYYIT
                     SLGLTESEASLWLESKSIRIRRSYSQWEPTLVDFKLIVEETSGRIIGGQLVSTADYIE
                     QMDVLSLAISKDLTVFDLVEHSWLCLPGNTPLVPFIVEAAQEYIRQFYQVDGEGVYAD
                     "
     gene            3888..5351
                     /locus_tag="U1021_000746"
     CDS             3888..5351
                     /locus_tag="U1021_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4711313.1"
                     /translation="MRIDSLLEKRERAIYQLLLYLEDRKEAPSLKDICHYLELSKSTL
                     LRYIVSFNEEAGVADLGLSFQLEDEKVFLKKKASLSLHRILAYLCQTSTKYQIIVYLS
                     DKEEVSIQQLAQELLISEATLNRHLASLNQILAEFGIGIKSGRLKGSELQIRYFLHQM
                     LSLTTTRAELQEEFMLGKIEALLPVFERFYQSPLNPKQAHRLLLWLMISQQRSRLRQL
                     DFKHLYKLMEPYQEHKFYRRLRKMYFTLSQQQSTSFQEGEIMALFAFLFSHFILAPHQ
                     LEQVLGFGGPIMEATSLALQKLRLYFEGNLPVSEEALYHLNQIMSQLYFFYSSVELEE
                     VEASSFYPEAEDLLKDVYKSVFHRKVDKEIRNSYLTNIADLYIYFSQVQPIQVKVAFA
                     SSLHEVLSYPLLLQLREKLEGNRQVLIEPYQAGYDYDLIITDYLENTSIPVYCLGNRL
                     KIQDIVQLKAWIQDIYHQKSCQSEIMATKTSFPIEHR"
     gene            5581..7095
                     /gene="glpK"
                     /locus_tag="U1021_000747"
     CDS             5581..7095
                     /gene="glpK"
                     /locus_tag="U1021_000747"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HEM4711314.1"
                     /translation="MSTEKYIMAIDQGTTSSRAIIFNKKGEKVGSYQKEFTQIFPKPG
                     WVEHNANEIWNSVQSVIAGSFIESGVRPDQIEGIGITNQRETTVVWDKETGLPIYNAV
                     VWQSRQTAHIADQLKADGHADMIHQKTGLVVDAYFSATKVRWILDQVPGAQERAEKGE
                     ILFGTIDTWLVWKLTDGKCHVTDYSNAARTMLYNIEELKWDDEILSLLNIPKAMLPEV
                     RSNSEVYGTTAPFHFYGAEVPISGMAGDQQAALFGQLAFEPGMVKNTYGTGSFIVMNT
                     GEEMQLSQNNLLTTIGYGIGGKVYYALEGSIFIAGSAVQWLRDSMRMVTTSPESEELA
                     RKSTSNDEVYVVPAFTGLGAPYWNSDARGSVFGLTRGTTKEDFVKATLQSIAYQVRDV
                     IDTMQLDTGIDISVLKVDGGAAMNSLLMQFQADILGIEIARAQNLETTALGAAFLAGL
                     AVGFWKDLDELKELNAVGQSFQPTMNEARKEQLYKGWKKAVAATQLFAEVDEEQ"
     gene            7171..9000
                     /gene="glpO"
                     /locus_tag="U1021_000748"
     CDS             7171..9000
                     /gene="glpO"
                     /locus_tag="U1021_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glycerol-3-phosphate oxidase"
                     /protein_id="HEM4711315.1"
                     /translation="MEFSKETRRLAIERMQDRQLDLLIIGGGITGAGVALQAAASGME
                     TALIEMQDFAEGTSSRSTKLVHGGLRYLKQFDVEVVSDTVSERAVVQNIAPHIPKPDP
                     MLLPVYDEPGSTFSLFRLKVAMDLYDLLAGVNNTDMANKVLTKEEVLEREPNLKQEGL
                     IGGGVYLDFRNNDARLVIENIKRAAKDGALIASRVKAEKFIKDEAGKVVGIVARDLLT
                     DRTFEIRAHLVINTTGPWSDEVRNLDGEGSGVLQLRPTKGVHLVVDSSRLSVPQPTYF
                     DTGHADGRMVFVLPRENKTYFGTTDTDYTGDLANPMVTQEDVDYLLDIVNNRFPEANL
                     TLDDIESGWAGLRPLLSGNGASDYNGGNNGKLSDDSFNSLIETVKGYLHNEKTRDDVE
                     HDLTHLEGSVSEKHLDPSAVSRGSALDRDDNGLLTLAGGKITDFRKMAEGAIEKVADI
                     LKEEHGRSFKLINSKTYPVSGGELNPANVAEEIEHLAQLGVKKGLVYDDALYLANLYG
                     SNAPKVFALNHKVEAVSGLNKRDLLSLHYAMKEEMTLTAVDYLLRRTNYMLFMREQLD
                     AVAPDVLKEMAAYYAWSEEEVAQQEQLLADTLVKNDLTHLKEK"
     gene            9014..9721
                     /locus_tag="U1021_000749"
     CDS             9014..9721
                     /locus_tag="U1021_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HEM4711316.1"
                     /translation="MTNELIGEVLGTALLILLGNGVVAGVVLDKSKAKDAGWIVITIG
                     WGLAVAMAAFVSGLLGPAHLNPAVSIAMAFAGNLPWGSVVPYILAQFIGAFIGSILVY
                     LTYKDHYDATEDTGAVLATFSTGPAIRNLVSNTISEAIGTFVLVLGLLAFGQYDFPTG
                     LGTLIVGGLIVSLGVSLGGPTGYALNPARDLGPRIMHAILPLKHKGDSDWGYALVPVV
                     GPIIGGLLAALLYGLIF"
     gene            9853..10803
                     /locus_tag="U1021_000750"
     CDS             9853..10803
                     /locus_tag="U1021_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM4711317.1"
                     /translation="MNNTGIHHISSLVGNIHQAYHFYHHILGLKLTLKTVNQEDSSMY
                     HLFFGDEEGRFGTEFTIFDMPNHPSHRPGSNRLERTVFLVKDFAALEFWQKRLTEFEV
                     ENEGIQAFGNGHILNFQDEDGQLLGLTYHNAIGEMFPYKTDEIPSEYAILGIASLHMR
                     IREEKELLSLLTETFGFVEESRFVFEDKMVISLLFDNTFQHRLYLILDQESPISVLGV
                     GAIHHIAFGVLDESDLEDLISRLNLINRPHSGIINRDFIHSLYFRAPNYLMFEVATMT
                     GERESEMPAQNEELDQVDLFLPSFFEEDRQEIEKNLSQRY"
     gene            11026..11418
                     /locus_tag="U1021_000751"
     CDS             11026..11418
                     /locus_tag="U1021_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711318.1"
                     /translation="MRLSAFLDFWQDLDIQPYQQITFVGFSNGANFIMDLLTKQSNLA
                     DNYILLHPSALDYAFPMENSRAEVLFTLGQNDQLVDQVALEHLVDDWRVSAFHKANLV
                     CFDKGHFLSQDELTYIKNWYQERIDKKT"
     gene            complement(11447..13237)
                     /gene="pepF"
                     /locus_tag="U1021_000752"
     CDS             complement(11447..13237)
                     /gene="pepF"
                     /locus_tag="U1021_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HEM4711319.1"
                     /translation="MTNAMPKRQEIDVQLTWDTDILFPTPDNYKENLAAYAKQVTAFE
                     SNYKGKLTDKDTIVSALTEYEKIVILDSRLSHYAFLPLEVDKMNTELASLANEYDLVS
                     AKARPQRDFLYSELGQLDEAFLLELKEEQPQWAAFFDGILRDKPHQLHPLQEELLSNF
                     APTFGQPYNNYGVTKFEDMTFDNFEANGQTLGNSYVLFENDYELSHDTEIRRNSAAGF
                     YSTLKKYKNTTAATYLSHIKNEQIEARLRGFDNTIDFLLHSQNVSRDLFDRQIDVIMK
                     ELAPHMRRYVKLVAKAHGLDKITHADLKISLPSEYNQRITPEESKQFLIDCLGILGED
                     YVKMIEQSFDERWIDFAQNEGKATGGFCATLYDGPSYILLSWTGLMNEVLVLAHELGH
                     AGHFQLAKKQSVLSYDPSLYFIEAPSTANEVLTCNTLLKNNQDPGFQAYLISELISRT
                     YFHNMVTHLLEAAFQREVYTRLDNEEYLNGDILCQIKLDVIKEFWGNDFEIGDDAGLI
                     WMRQPHYYIGLYPYTYSAGLTIGTAMAKQLEEHPEEVVEKWLETLSLGASLSAQDLAK
                     HAGVDVSTDQPLKETIAYIGSLVDKLETLI"
     gene            13404..13742
                     /locus_tag="U1021_000753"
     CDS             13404..13742
                     /locus_tag="U1021_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002264292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711320.1"
                     /translation="MQVIKRSGEIVEFDPDKIYQAIIKAAQTVYVIDETWRKNLAQVT
                     KKVVLDLEEAHTERPTISMVQSQVEHRLLDAGYISIAEHYISYRLQRDLERNGYGDKI
                     IVHLRFEQVR"
     gene            13928..15295
                     /locus_tag="U1021_000754"
     CDS             13928..15295
                     /locus_tag="U1021_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019768617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEM4711321.1"
                     /translation="MAKIVVVGANHAGTAAIKTMLTNYGQENEIVVFDQNSNISFLGC
                     GMALWIGEQIGGPEGLFYSNKEELESLGATVYMESPVTNIDYDAKTVTALVNGQEHVE
                     SFEKLLFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIEKLKNKDI
                     NRVAVVGAGYIGVELAEAFQRKGKEVILIDVVDTCLAGYYDRDLSDLMAKNLEEHGIQ
                     LAFGETVKEVAGNGKVEKIITDKNEYDVDMVILAVGFRPNTAFAGEGIERFRNGAFLV
                     NKRQETSIPGVYAIGDCATIYDNATGDTSYIALASNAVRTGIVAAHNICGTDLEGIGV
                     QGSNGISIYGLNLVSTGLTLEKATRLGLNAAVTEVTDNQKPEFMEHGNFPVTIKIVYD
                     KDSRRILGAQMAAREDISLGIHLFSLAIQEGVTIEKLALTDLFFLPHFNKPYNYITVA
                     ALGAE"
     gene            15438..16649
                     /locus_tag="U1021_000755"
     CDS             15438..16649
                     /locus_tag="U1021_000755"
                     /inference="COORDINATES: protein motif:HMM:NF014691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEM4711322.1"
                     /translation="MYKRLEIVSYSDFDNYEAEYQKRFDSLATIKTGLTINPFSKREQ
                     RRLADKHQLFYVLLPNHVMDIEKIYKNSQLLSNFDLSSVQMQKLFYLQIIDEIQSTND
                     MEGVKSTRKEIKEAYNSLDKNKRFSGIVSMYHSILKNEFEKIDSLSKFRNIYDQLFLD
                     EMSEDEKPDGELFRKKVIYVGDGNSYVHQGNSSEFSINEDLTKLIIFMNNPEIPLIIK
                     SIITHYFFEYVHPFYDGNGRMGRFLMSSYLSRKLDFLTGLSLSESVLQNKSKYEEGFS
                     ITSHPKNRGDLTPFVGTMLEIILNAQENMKTKLGKLKSQLDRVWILIDGLDLTGPQKE
                     LLFILSQDKLFDVLHTGVSNKELTEAFGGKYKRTRIDSTLKTLEGMGLVTKVKSSPVI
                     YEVSSNLIKDI"
     gene            16924..19203
                     /gene="pcrA"
                     /locus_tag="U1021_000756"
     CDS             16924..19203
                     /gene="pcrA"
                     /locus_tag="U1021_000756"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase PcrA"
                     /protein_id="HEM4711323.1"
                     /translation="MNPLLNGMNDRQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYL
                     IDEKMVNPWNILAITFTNKAAREMKERAYALNPATQDCLIATFHSMCVRILRRDADHI
                     GYNRNFTIVDPGEQRSLMKRILKNLNLDPKKWSERSILGTISNAKNDLIDDKAFEAQA
                     GDLYTQIVAKCYTAYQKELRQSEAVDFDDLIMLTLRLFDQNPEVLTYYQQKFQYIHVD
                     EYQDTNHAQYQLVKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPESKVVL
                     LEENYRSTKNVLQAANEVIENNRNRRPKKLWTQNAQGDLITYYRARDENDEAIFVAGQ
                     IDQLHREGKAYKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDVISY
                     LNIIANPSDNISYERIVNEPKRGVGPGTVDKLRDFATSHSMSLLEASQDIMLSPVKGK
                     AAQAVFDLANLLYNLRNQLDNLTVTQVVEAVLNQTGYIDALAAQNTLEANARIENIQE
                     FLSVTKNFDEKDVEEEETGLDRLTRFLLDLALIADTDDGDTESSEVTLMTLHAAKGLE
                     FPVVFLIGMEENVFPLSRAAEEEDELEEERRLAYVGITRAEQTLYLTNANSRLLFGRT
                     NYNQPSRFIREISSDLLDYQGLARPANTSFKASYVNGRATQFGQGMSLQQALQSRKAS
                     VQPSAKLGGSMPFASSNRSSSSGTNWSVGDIAVHKKWGRGTVLEVSGSGSNQELKINF
                     PEMGLKKVLASLAPISKED"
     regulatory      19266..19355
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            19688..20335
                     /locus_tag="U1021_000757"
     CDS             19688..20335
                     /locus_tag="U1021_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4711324.1"
                     /translation="MNKMVIWFDLDGVIFDSYDVWDQVVQGILKLHGVAYTQQIKEEL
                     WRIPMEDVNAYLLQLVENSLDENELERQKMNQLQSLYRDISLMDGVHELLSTLKAKGA
                     VMYAVTSNYLELAELGLSSHHLSNYFVKLFSSLDLFGSDKNREFYQFILHQEQIDPAN
                     IVMVEDNMNNLRIGHELGIAGVYIEHPNSPFSDENTGIVSIKQLSELIPILEDRK"
     gene            20332..21129
                     /gene="thiD"
                     /locus_tag="U1021_000758"
     CDS             20332..21129
                     /gene="thiD"
                     /locus_tag="U1021_000758"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEM4711325.1"
                     /translation="MTSLHVALSIAGTDPTGGAGIMADLKSFQARSVYGMAVVTSVVA
                     QNTKGVQLIRHLDQEILEEQLKSVFQDIVPDAIKTGMLAQVETIELVASYLAKQKCPY
                     VLDPVMVATSGDRLIEEDAIQALKTKLLPLATIITPNLPEAEVLVGRTLKSENDIMNA
                     GRWIRKEFGLKNVVIKGGHLAKAASDYLFLEDGEISVISSARISTNHTHGTGCTYAAV
                     ITAELAKGRTVAKAVETAKRFITEAIQTAPELGHGNGPVNHTTYRGE"
     gene            21134..21919
                     /gene="thiM"
                     /locus_tag="U1021_000759"
     CDS             21134..21919
                     /gene="thiM"
                     /locus_tag="U1021_000759"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HEM4711326.1"
                     /translation="MYLEKLRSQNPLTICITNDVVKNFTANGLLALGASPAMSEYPED
                     LEDLLPYAKGLLINTGTLTNETWELYKSALDIAEKYGVPTVLDPVAAGAGAYRKKVTL
                     DLLHHHTISLVRGNAGEIAALIGESIETKGVDSAQIDNVGELALRANQQLGIPVVITG
                     KKDAAAVNHQVRILENGSELMPLVTGTGCLLGAVLAASIHLADEDSLLDCLEEVLSAY
                     SIAGEMAEQKTLLPGTFQIEFINSLYAIQSEEVEENKKVIQYE"
     gene            21912..22601
                     /locus_tag="U1021_000760"
     CDS             21912..22601
                     /locus_tag="U1021_000760"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEM4711327.1"
                     /translation="MNRKMLQVYFICGTSDCPKGKFLDVLEKALQAGITCFQFREKGE
                     QGLTGADKLLLAKQVQHLCHRYQVPLIINDDVELARAIDADGIHLGQEDLSVVEARQL
                     FPGKIIGLSVGTKEEYLNSPIDLVDYIGSGPVFPTLSKDDASPAIGMDGLKQLRKLNS
                     DIPMVAIGGLSAKDCKEVLQAGADGIAVISAISHAEDPYKATKILVDGMQAMILKFNQ
                     VESNKQILKSP"
BASE COUNT         6759 a         4314 c         5051 g         6480 t
ORIGIN      
        1 atttcagact ttccatttat tgaaattgtg gtataattat gaaataacaa atatttagaa
       61 aattttgaag aattgactta aaggagattt ctatggccta tgtagtagct gttgttggtg
      121 ccactggtgc agttggtgcc caaatgatta aaatgttgga agagtcaaca cttccaatcg
      181 agaaagtgcg tttccttgct tctgcccgtt cagcaggcaa gaccttgcag tttaaggggc
      241 aggatattgt cattgaagaa acaacagaaa cagcctttga aggagtggat attgccctct
      301 tctcagctgg tggctctaca tctgccaagt acgctcctta cgctgtaaaa gcaggagctg
      361 tagtagttga caatacctct tacttccgtc aaaatccaga tgttcctctg gttgtttctg
      421 aggtaaatgc tcacgcgctt gataatcaca atggtatcat cgcctgccct aactgttcaa
      481 ctattcaaat gatggtcgcg cttgaacctg tccgtcagaa atggggcttg gagcggatta
      541 tcgtatcgac ctatcaggcg gtttctggtg caggtatggg agctatcttg gaaacccaag
      601 ctcaattgcg tgcagtcttg aatgatggag tagagccaaa agcggtagaa gcaaatattc
      661 ttccttctgg tggcgataag aagcactatc caatcggttt caatgctatt ccgcaaatcg
      721 acctcttcac tgaaaatgac tacacttatg aagagatgaa gatgacaaaa gagactaaga
      781 aaatcatgga agatgacagt attgctgttt ctgcaacctg cgtccgcatt ccagtcctgt
      841 ctgcccactc tgagtctgtt tacatcgaaa ctaaggaaat tgctccaatt gatgaggtaa
      901 aagcagccat tgcagctttc ccaggcgcag ttttggaaga tgatgtggca aaccaagtct
      961 atccacaagc tgtcaatgca gttggtagcc gcgatacctt tgtcggtcgt atccgtaagg
     1021 acttggacaa ggaaaacggt attcatatgt gggttgtctc tgacaacttg cttaaaggtg
     1081 cagcatggaa ctctgttcaa atcgctgaaa cccttcatga gcgtggtcta gttcgtccaa
     1141 cggcagaatt gaagtttgaa ttgaaataat tttattaacc aaaagtacac aaaaggctgc
     1201 actcagcctt ttttagcaac aatcagtaag agaggaagcc tatgtctatt caagatttac
     1261 gtgatgtaaa aattattaca gcaatgatta cccctttcaa agaagatggt tcgattaatt
     1321 ttgaagtttt acctgagttg attgagcatc tgttgtccca tcacacagaa gggattttat
     1381 tagcaggaac aactgccgaa agtccaaccc tgacacacga ggaagaactg gaactatttg
     1441 gtgctgtgca aaaaattgtc aatggtcgtg ttcccctaat tgcaggtatc ggtacaaacg
     1501 atacgcgcga ctcgattgag tttgccaaag aagtggcggc attcggcggc tttgcggcag
     1561 ggcttgctat cgtgccttac tacaacaaac cttctcaaga aggcatgtac cagcacttca
     1621 agactattgc ggatgcctct gatttgccaa tcattatcta caatatccca ggtcgtgtcg
     1681 tggttgaaat gacgccagaa accatgttac gtttggctga gcatccaaac atcatcggtg
     1741 ttaaagagtg tacaagcctt gccaacatgg cttacctaat tgagcataaa ccagaagact
     1801 tcttgattta tacaggagag gatggcgatg ctttccatgc aatgaacttg ggagcagatg
     1861 gtgtgatttc tgttgcatct cacacgaatg gtgatgagat gtatgaaatg tttacagcca
     1921 tcgaacaaca agatattcga acagcagccg ctattcaacg caagttcatt ccgaaagtca
     1981 atgccctctt ctcatatcca agtcctgcac cagttaaggc ggttcttaat taccttggat
     2041 ttgaagttgg tccactccgc ctgccgttgg ttccatgtcc agaagaagat gccaaacgca
     2101 ttatcaaagt agtcgttgac ggcgactacg aagcaactaa agctactgtg acaggagtcg
     2161 taagaccgga ttattaaaat agtcagggga gtgactattt taacgtgagc cttgaaataa
     2221 gagagcgagc aatgtctggg ggagtgaaac agttcgggga actgtttcag ctggtcacca
     2281 agaaatacga aagtgaccat agaagacccg agccaagaaa tgcgaaagcg aggatagtca
     2341 agggagtgac tattttaacg tgagttagag cataaagagt gaggagtttg gaaaaacatt
     2401 aatctagagg agcttctggc cattttcctc gttttattta agtttacaca agcacatcag
     2461 ttatctggtg tgttttttag ttgcaagcct tttcaatttt ttggcattct tgatataatg
     2521 actaaaaacg ataaaaggat taagtatgaa tattgttatt ataggcgcct cctttgctgg
     2581 tttaagtgca gctttggaat gtcgaaaatt gtatcaaaat gttcagataa cactaattga
     2641 tagagaaaaa gatgtggctt actttccaaa taccttgaat tggaaagtgg caggaaaaat
     2701 ttctggttgg gaagaagcga agatttcttt gttcagcgag gtgcagcatg cagctatttc
     2761 ttgtcttttt gaaacagaat gtctcgcagt ttatcccgaa atgcgaaagg taaagatacg
     2821 acatcatcaa gatataggtg atattattta tgaccggcta atattggcta tgggagctag
     2881 tcaaacatgg gaatggggaa cggaagaact tcaagactat ctaattcgct caaaaacgct
     2941 atctcaagca caagctagtc tagaaaaatt gacaaatgca aaaacagttg cagtgattgg
     3001 ggcaggacag attggtttgg aaagcttgga tgcccttagc cagttggatt tgaatttgca
     3061 tgtgtttgag gcgcaagatt cactccttgc aaagtacgtt gatgaggata tgattgcgtc
     3121 gattcgtcaa gagatggaaa aaagaggaat ccaacttcat ttatccgaaa cagtcaatca
     3181 gataacgatt gatactcagg aagaacagct ggtttgtcat acagttacag gtaattatcc
     3241 agctgattta gtcttgccat ccaccaattt gacgcccaat attcagctag tgaaagacaa
     3301 gctaaaagtg actgcagaag ggactgtatg ggtggatgag tttcttgaaa caagtcaaga
     3361 gaatattttt gctgtaggtg atttggtcag tctcccagta gattattttg gtcaggcata
     3421 tcttccgatg attcatcatg cgattatgac agggaggatg gctgctcgaa atttgcaaaa
     3481 gaggattgct cctattaaga gagcccagcg gattgtttct agtcatgtat ttggctatta
     3541 tataactagc cttggcttga ccgagagtga ggcgagcttg tggttggaga gtaaatcgat
     3601 tcggattaga aggtcgtata gccagtggga accaacttta gtagatttca agctgattgt
     3661 cgaagaaacg agtgggcgca tcataggggg gcaactcgtt tctactgcag attatattga
     3721 acagatggat gtactgtctc tagcgatttc aaaggatttg accgtctttg acttggtaga
     3781 acattcttgg ctctgtcttc ctggaaatac tcctctggtc cccttcatcg tagaggccgc
     3841 tcaagagtat attcggcaat tttatcaggt tgatggggag ggtgtctatg cggattgatt
     3901 ccttattgga aaagcgtgag cgcgccattt atcagcttct cctctactta gaagatagga
     3961 aagaggcgcc atcgctaaag gatatttgtc actatttaga attgtcaaaa tcaactcttc
     4021 ttcgctatat tgtatctttc aatgaagaag caggagtagc cgacttggga ctctcttttc
     4081 aactcgaaga tgaaaaggtc tttttgaaga aaaaggccag tttgagtctt catcgtatcc
     4141 tagcctatct ctgtcaaacc agtaccaaat atcaaattat tgtttattta tctgataagg
     4201 aagaggtttc tattcaacag ctggctcaag aattgctgat aagcgaagcg actctgaatc
     4261 gccatcttgc ctctttgaac cagatattgg cagaatttgg tattggaatc aaaagtggtc
     4321 gtctaaaagg tagtgagctt caaatacggt actttttaca tcaaatgttg agtttgacta
     4381 ctacgagagc ggaattacaa gaagagttta tgctagggaa aatagaggcc ttattgccgg
     4441 tttttgaacg cttctatcaa tcgccgctaa atcctaagca agcccatcgt ctgttgttgt
     4501 ggttaatgat ttcacagcaa cgctctcgat tgcgacagct agattttaag cacctttaca
     4561 aattgatgga accctatcaa gaacataagt tttaccgacg tttgagaaag atgtatttta
     4621 cactaagtca gcaacaatcc acctctttcc aagaagggga gattatggcg ttgtttgctt
     4681 tcctgtttag ccatttcatt ttagcgccgc atcaattaga gcaggttctt ggtttcggtg
     4741 ggccgattat ggaagctacc tctttggctc ttcagaaatt acggttatat tttgagggaa
     4801 atttaccagt ctcagaagaa gcactctatc atctgaacca aattatgagc cagctatatt
     4861 tcttttattc ttccgttgaa ctggaagaag tagaagcttc tagtttctat ccagaagcag
     4921 aagacttgct aaaagacgtc tataaatcag tttttcatag aaaagtcgat aaagaaataa
     4981 ggaactctta tctgacaaat attgcggatt tgtatattta ttttagtcag gtccagccta
     5041 tacaggtcaa ggttgctttt gcttcttccc tacatgaggt tctatcctat cctctcttgt
     5101 tgcaactaag ggagaagtta gaaggcaatc gtcaggttct tattgagccc tatcaagcag
     5161 gatatgacta tgatttgatt attacagatt acctcgaaaa tacaagcatt ccagtttatt
     5221 gcctaggaaa tcgattgaaa atccaagata tcgtacaatt aaaggcatgg atacaggata
     5281 tatatcatca aaagtcctgt caatcagaga ttatggcgac caaaacttct tttcctatcg
     5341 agcatcgcta gatgatgtca gatagtcttt gtgaaaaatg taagtgcatt taaccttgaa
     5401 aaatttattt tataaactct gataacagtt gatagaatca tctttctagc cactgcttat
     5461 cagatttttt tatttttttg aaaaaaatga taggaaaaat tcacaagaat gggttagaat
     5521 agaattacca agaaaacgga agcgttttca aaaaaagata aacaaacagg agggagacct
     5581 atgtctactg aaaaatatat catggccatt gaccaaggaa ctacaagttc acgcgccatt
     5641 atcttcaata aaaaaggtga aaaggttggc agttaccaaa aagagtttac gcaaattttc
     5701 cctaaaccag gttgggtcga acataacgcc aatgaaattt ggaattctgt tcagtctgtg
     5761 attgcagggt cctttatcga aagcggtgtt cgtcctgatc agattgaagg aattggtatt
     5821 accaaccagc gtgaaacaac cgttgtctgg gataaggaaa caggtcttcc aatttacaat
     5881 gccgttgtct ggcaatctcg tcaaacagct catattgctg accagctgaa ggcggatggt
     5941 catgcagata tgattcatca aaagacaggt ctagtagtcg acgcctactt ctcagcaacc
     6001 aaagttcgct ggattttgga ccaagtccct ggagcgcagg aacgtgctga aaaaggggag
     6061 attctcttcg gaaccattga tacttggttg gtttggaaat tgacagatgg gaaatgccat
     6121 gtgacggatt attcaaacgc agctcgtacc atgctctaca acattgaaga gttgaaatgg
     6181 gatgatgaaa ttttatctct tctcaatatt ccaaaagcca tgttgccgga agttcgttca
     6241 aactctgaag tttacggcac aacagctcca ttccatttct atggcgcaga agtgccaatc
     6301 tctggcatgg caggtgacca acaggctgcc ctatttggac aattggcatt tgagccaggt
     6361 atggtgaaaa atacttacgg aaccggttcc ttcatcgtga tgaatacagg tgaagagatg
     6421 cagttgtcac agaacaacct tctcacaaca attggctatg gtatcggcgg caaagtctat
     6481 tatgcgcttg aaggatctat ctttatcgct ggttcggcgg ttcaatggct ccgtgatagc
     6541 atgcgaatgg tgactacatc acctgagtca gaagagcttg ctcgtaagtc taccagcaat
     6601 gatgaagtct atgttgttcc agcctttaca ggacttggtg ctccctattg gaactcagat
     6661 gcgcgtggct cagtctttgg tctcactcgt ggtacgacta aagaagactt cgtcaaagca
     6721 actcttcaat ccattgccta ccaagttcgt gatgttattg ataccatgca attagataca
     6781 ggtattgata tttctgtctt gaaggttgac ggtggtgcag caatgaacag cctcctcatg
     6841 caattccaag cagatatttt gggtattgaa atcgcacgcg ctcaaaacct tgaaactaca
     6901 gctcttggag cagcattctt agcaggttta gcagttggtt tctggaaaga tttggatgaa
     6961 ttgaaagaac tcaacgctgt cggccaatcc ttccaaccaa ccatgaacga agctcgtaaa
     7021 gaacaacttt acaagggatg gaaaaaagct gtcgcagcaa ctcaactatt tgcagaagtg
     7081 gatgaggagc aataaaggac ttgttagcta ggggaaagaa gaatttcctc ttgctagaca
     7141 gtcctattcg aaagttagga agtgaatcgt atggaatttt caaaagaaac aagacgctta
     7201 gctattgagc gaatgcagga tcgtcaactt gacctcttga ttatcggggg tggtattaca
     7261 ggtgctggtg tggctttaca ggcagctgca agtggcatgg aaacagcctt gattgaaatg
     7321 caagactttg cagaaggaac atccagccgt tcaacaaaat tggtgcatgg tggattacgt
     7381 tatttgaaac aatttgacgt ggaagtggta tccgataccg tatctgaacg tgctgtagta
     7441 caaaatattg ccccacatat tccaaagcca gacccgatgc tcttgccagt ctacgacgag
     7501 ccagggtcaa ccttcagtct tttccgtttg aaagtggcta tggacctcta tgatctcttg
     7561 gctggcgtca ataataccga tatggccaat aaggtcttga ctaaagaaga agtacttgaa
     7621 cgtgaaccaa acttgaagca agaaggtttg attggtggcg gtgtctatct tgatttccgt
     7681 aacaatgatg cccgcttggt tattgaaaat atcaaacgtg cagccaagga tggtgccttg
     7741 attgccagcc gtgtcaaagc tgagaaattc atcaaggatg aggctggaaa agttgtcggg
     7801 atcgtcgctc gtgacttact gacagaccgc acctttgaaa tccgtgctca tttggtcatc
     7861 aatacaacag gaccatggag tgatgaagtg cgtaatctgg atggagaagg ttcaggcgtt
     7921 ctccagttgc gtccgaccaa gggtgtgcac ctagttgtcg atagctctcg cctgtctgtt
     7981 ccacaaccaa cctactttga cactggtcac gctgacggcc gtatggtttt tgtccttcca
     8041 cgtgaaaata aaacttattt tggtacgaca gatacagact atactggtga tttggcaaat
     8101 ccaatggtaa cccaagaaga tgttgactac ctgcttgata ttgtcaacaa tcgcttccca
     8161 gaagcaaatt tgaccttgga tgacattgag agcggttggg caggtcttcg tcccctcttg
     8221 tctggaaatg gagcttctga ctacaatggt ggaaacaacg gtaagctcag cgatgacagc
     8281 tttaatagct tgattgaaac ggtcaaaggt tatttgcaca atgaaaagac tcgtgacgat
     8341 gtggaacatg atttgacaca tttggaaggt agcgtttctg aaaaacactt ggatccttca
     8401 gctgtatcac gtggctctgc ccttgaccgt gatgacaatg gtttgctgac tcttgctggt
     8461 ggtaagatta ctgacttccg taagatggca gaaggtgcaa ttgaaaaagt ggcagacatc
     8521 ctcaaagaag aacatgggcg tagcttcaaa ctcatcaatt ctaaaactta cccagtctct
     8581 ggtggcgaat tgaacccagc taacgtagca gaagaaattg aacatcttgc tcaactaggt
     8641 gtgaagaaag gacttgtcta tgatgatgcg ctttacttgg caaacttgta cggctcaaat
     8701 gcgccaaaag tctttgcctt gaaccataaa gtagaagccg tttctggctt gaacaagcgt
     8761 gacttgcttt cccttcatta tgctatgaag gaagagatga ccttgaccgc agttgactat
     8821 cttctccgtc gtaccaacta catgctcttt atgcgtgagc agttggatgc ggtagcacca
     8881 gacgttttga aagaaatggc agcttactat gcttggtcag aggaagaagt tgctcaacag
     8941 gaacaattgt tggcagatac acttgttaag aatgatttga cccatttgaa agaaaaatag
     9001 aaagaggtgc atgatgacaa atgaattaat cggtgaagtg ttgggtactg ccttgctgat
     9061 attacttggt aacggtgttg tagcaggggt agtgctagat aagagtaagg ccaaggatgc
     9121 tggttggatt gtaatcacaa ttggttgggg tctagcagta gccatggcag cttttgtgag
     9181 tggtttattg ggacctgccc acctcaatcc agctgtatca attgccatgg cctttgcagg
     9241 aaatctccca tgggggtctg tagtccctta tatccttgct caatttatcg gagcctttat
     9301 cggaagtatc ttggtctacc tcacgtacaa agatcactac gatgcaacag aagacactgg
     9361 tgctgtgttg gcaactttct ctactggacc tgccatccgg aacttagttt ctaatacaat
     9421 tagcgaagca atcggaacct ttgttttggt cttgggatta ttggctttcg gtcagtatga
     9481 ttttccaaca gggctaggca ctttaatcgt cggtggtttg attgtttccc tcggagtttc
     9541 tcttggtggt ccaacaggat atgccctaaa ccctgcgcgt gatcttggtc ctcgtatcat
     9601 gcatgccatc cttccattga agcacaaggg cgattcagat tggggctatg ctttggtacc
     9661 agtagttggt ccaatcatcg gaggcttgct tgcggctctc ctttatggtc tcatttttta
     9721 aaaaatatcc ttctctaatc agcaatggtt agggaagttt tttattattt ggctgtcaat
     9781 cgtgagcaaa agtttgtttt atatcaataa ttagcgataa aataagtcta ttaacatcag
     9841 tgaggtcatc ttatgaacaa tacaggtatt catcacattt caagcttggt aggaaatatt
     9901 catcaagcct atcattttta tcatcatatt ctcggcttaa aattgacctt gaaaactgtc
     9961 aatcaagaag attcaagtat gtatcatctc tttttcggtg atgaagaggg tcgctttgga
    10021 acggaattta ccatttttga tatgcccaat catcctagtc atcgaccagg cagcaatcgt
    10081 ttggaacgaa ccgtttttct ggttaaagat tttgctgcct tggaattctg gcagaaaaga
    10141 ctgacagagt ttgaagtgga gaatgaagga attcaggctt ttggaaatgg gcatattctg
    10201 aatttccaag atgaagatgg acagctgctt ggcttgacct atcataacgc tatcggagaa
    10261 atgtttccgt ataaaacaga tgaaattccg tcggaatatg ctattcttgg catcgccagt
    10321 ctacatatgc ggattcgtga agaaaaggag ttgttatctt tgctgacaga aaccttcgga
    10381 tttgttgagg aaagtcgatt tgtctttgag gataagatgg tgatttctct tctctttgac
    10441 aacaccttcc agcatcgcct ttatttgatt ttagaccaag agtctccaat cagtgtattg
    10501 ggagtcgggg ccattcatca tatcgcattt ggtgtcttag atgagtccga cttggaagac
    10561 ctgattagtc gcttaaatct catcaatcgt ccacattctg gtatcattaa tcgagatttc
    10621 attcattcct tgtacttccg agcgccaaat taccttatgt ttgaggtggc aaccatgact
    10681 ggtgagcgcg aatcggaaat gccagctcag aatgaagagt tggatcaggt agacctattt
    10741 ttgccaagtt tctttgaaga ggatagacag gaaatcgaaa aaaatctctc ccaacgttat
    10801 taggagaaat gagatatgga ttatcgcttt atcaaaggga ccagtccccg tcttttggtc
    10861 tttttccacg gcacaggtgg caacaaggaa tccatgctct ttctccgcca acagctggat
    10921 ccaaaagctt ctgtcctttc cttggaggga agttggggtc aaggcaggaa aaggcgtttc
    10981 tttgccccgc tgatcgatgg tcagctggat cttgtcgatg ttgaaatgcg cttgtcggct
    11041 tttctggatt tttggcagga cttagacatt cagccctacc agcagattac ctttgttgga
    11101 ttttcaaatg gtgccaactt tatcatggac ttgttaacca agcagtcaaa cctggcggac
    11161 aattatatct tgctccaccc ttcagcttta gattatgctt ttcctatgga aaatagcaga
    11221 gcagaggtat tatttacact ggggcagaat gaccaactcg tcgaccaagt cgctcttgaa
    11281 catcttgtag atgactggcg agtgtcagct tttcacaaag ccaacttagt ttgttttgat
    11341 aagggacatt ttttaagtca ggatgaattg acctatatca aaaattggta tcaggaaaga
    11401 atagacaaaa agacctgaac aaataagttc aagtctttta tgtgtcttag attagtgttt
    11461 ccagtttatc caccaaggaa ccaatatagg cgatggtttc tttaagtggt tggtcagttg
    11521 aaacgtcaac acctgcgtgc ttagcaaggt cttgggcaga aagacttgca ccgagtgaca
    11581 aggtttccaa ccatttttca acaacttctt caggatgttc ttctaattgt ttcgccatag
    11641 ccgtaccgat ggtcaaacca gctgagtagg tatatggata caacccaatg tagtagtgcg
    11701 gttgacgcat ccagataaga cctgcatcgt caccaatttc aaagtcgttg ccccagaatt
    11761 ccttgatgac atccaacttg atttggcaga gaatatcacc attgaggtat tcttcattgt
    11821 ccaaacgagt gtagacttca cgttggaagg ctgcttcaag caagtgagtg accatgttgt
    11881 ggaagtaagt acggctgatc aactcgctaa tcaagtaagc ctggaagcca ggatcttggt
    11941 tgtttttcaa aagggtgtta catgttaaga cttcgttagc agtagaaggc gcctcgatga
    12001 agtagaggga tggatcgtag ctgagaacgc tttgtttctt agccaattgg aaatgaccag
    12061 catgtcccaa ttcgtgagcc aataccaaga cctcgttcat caagcctgtc catgaaagta
    12121 agatgtaaga tggtccatca taaagagtag cacagaagcc accagtagcc ttaccttcgt
    12181 tttgagcaaa gtcaatccaa cgctcatcaa atgattgttc aatcattttc acataatctt
    12241 caccaagaat gcccaggcag tcaatcaaga attgtttgga ttcttcagga gtgatgcgtt
    12301 ggttgtattc agatggcaag ctgattttca agtcagcatg agtgatttta tccaaaccat
    12361 gagccttggc aaccaatttc acatagcgac gcatgtgagg ggccaattcc ttcatgatga
    12421 catcaatctg acggtcgaag agatcacgag agacattttg actatgcaag aggaagtcaa
    12481 tggtattgtc aaatccacgc aagcgagctt caatttgctc attcttgata tgagataaat
    12541 aagtcgctgc agtagtattc ttgtattttt tcaaggttga atagaaacca gcagctgaat
    12601 tacgacggat ttcggtatca tggctgagct cataatcatt ttcaaagaga acatagctat
    12661 tgccgagtgt ttgaccattt gcctcgaagt tgtcaaaggt catatcctca aacttggtca
    12721 caccgtagtt gttatagggc tgaccaaatg ttggtgcaaa atttgataaa agttcttctt
    12781 gaagtgggtg cagttgatgc ggcttgtcac ggagaatacc atcaaagaat gcagcccatt
    12841 gtggttgttc ttcttttaat tcaagaagaa aggcttcatc taattgccca agttctgaat
    12901 agaggaaatc tcgttgagga cgtgccttgg cagaaacgag gtcgtattcg ttggccaggc
    12961 tcgccaattc agtattcatc ttatcgactt ccaaaggaag gaaggcatag tgggaaagtc
    13021 tgctatcaag aataacgatt ttttcgtatt ctgttaaggc ggaaacgatg gtatccttat
    13081 cagttagctt tcctttgtaa ttcgattcga aagctgtcac ttgcttagcg taggctgcta
    13141 aattttcttt gtagttgtca ggggtcggaa ataaaatgtc cgtatcccag gttaattgca
    13201 catcaatttc ttgacgttta ggcattgcgt ttgtcatgat tttctcctta tttcatttta
    13261 ataggtccat tatatcatac taaagggctt tcagcgaaaa taagccaagg caaaatttat
    13321 gaaaaagaat acttgacaaa atacacaaaa acctagataa tgtaagtatg aaagggttta
    13381 ctgaaaacca gaaaggagct tttatgcaag tcattaaacg tagtggagag attgttgaat
    13441 ttgacccaga taaaatctac caagccatca ttaaagctgc acagacagtt tatgtcattg
    13501 atgaaacttg gcggaaaaat cttgctcagg tcacaaagaa agtagtgctt gacttggaag
    13561 aagctcatac agagcgacca acgattagca tggttcagtc gcaagttgaa caccgtcttt
    13621 tagatgcagg gtatatttct attgctgagc attacatttc ctatcgcttg caacgtgatt
    13681 tggaacgtaa cggctatggc gataagatta ttgtacatct gcgttttgaa caagtacgtt
    13741 aagagaaacc tagagaaatc taggtttttt gcttttatat atctttacat tgtttaaaga
    13801 aaatagcatt ttaaaaactt tttgaaaaaa atgtgatatt ctgagcaaaa attttgtaat
    13861 cggtatcatt tttagtgtat aatagacttt gtaaaaaaat atattttcga aagtgagatt
    13921 tcacattatg gctaaaatcg ttgttgtcgg tgctaaccat gctggtactg ccgcaatcaa
    13981 aactatgttg acaaattatg gtcaagaaaa cgaaatcgtt gtatttgacc aaaactcaaa
    14041 tatttcattc ttgggttgtg gtatggcttt gtggattggt gagcaaattg gcggtcctga
    14101 aggacttttc tactcaaaca aagaagagtt ggagagcttg ggcgcgacag tatacatgga
    14161 gtcacctgtt acaaatattg actacgatgc aaaaacagtt actgcacttg taaatggtca
    14221 agaacatgtt gaatcatttg aaaaacttct tttcgcaact ggttcacaac ctatcttgcc
    14281 accaatcaaa ggagctgaaa tcaaagaagg ttctcttgaa tttgaagcaa ctcttgaaaa
    14341 cttgcaattc gtaaaattgt accaaaactc agcagatgtt attgaaaaat tgaaaaacaa
    14401 agacatcaac cgcgtagcag tagttggtgc tggttacatc ggtgttgagc ttgcggaagc
    14461 attccaacgt aaaggtaaag aagttatcct tatcgacgtt gtagatacat gtttggctgg
    14521 ttactatgac cgcgacttgt cagaccttat ggctaaaaac ttggaagagc atggtattca
    14581 acttgccttt ggcgaaactg ttaaagaagt tgcgggtaat ggtaaagttg agaaaatcat
    14641 cactgacaag aacgaatacg atgttgacat ggttatcttg gctgttggtt tccgtccaaa
    14701 cactgcattt gcaggtgaag gaatcgagcg tttccgtaac ggtgccttcc ttgtaaacaa
    14761 acgtcaagaa acttcaatcc caggcgttta cgctatcggt gactgtgcaa ctatctacga
    14821 caacgctact ggcgacacaa gctacatcgc tttggcttca aacgcagtac gtactggtat
    14881 cgtagcagct cacaacatct gtggtactga ccttgaaggt atcggtgtac aaggttctaa
    14941 cggtatctct atctacggtc ttaaccttgt atcaacaggt ttgacacttg aaaaagctac
    15001 tcgtcttggt ttgaacgctg ctgttactga agtaactgat aaccaaaaac cagaattcat
    15061 ggaacatggt aacttcccag taactatcaa gattgtttac gataaagatt cacgtcgtat
    15121 tcttggtgcg caaatggctg ctcgtgaaga catctcattg ggtatccacc tcttctcatt
    15181 ggcaatccaa gaaggtgtaa caatcgaaaa attggcattg acagacttgt tcttcttgcc
    15241 acacttcaac aaaccataca actacatcac agtagctgcc ttgggtgctg aataatcaat
    15301 tgaatacaaa agctcagaga tgcctctggg cttttttagt aaaaattgaa attatattta
    15361 aaaatatcaa aaaaacttga atttaatttt taaaaatggt aaaattttag aaattcaaaa
    15421 acaaaagagg tgtttttatg tacaaaagac tagaaattgt gagttattct gattttgata
    15481 attatgaagc ggaatatcaa aaacgctttg atagtctagc taccataaaa acaggattga
    15541 caatcaatcc tttttcaaag agggaacaaa gaaggttggc agataaacac caattgttct
    15601 atgtattgct tccgaaccat gtcatggata ttgaaaagat ttataaaaat agccaacttc
    15661 tttctaattt tgatttatca agcgttcaga tgcaaaagct attctatttg caaatcattg
    15721 atgaaatcca aagtaccaat gatatggaag gagtcaaatc tactcgtaaa gaaataaagg
    15781 aggcatataa ctctctagat aaaaataaaa ggttttctgg aatcgtttcg atgtaccatt
    15841 ctattttgaa aaatgaattt gagaaaatag attctttgtc taaatttaga aatatttatg
    15901 atcaattatt tttagatgag atgtcagaag atgaaaagcc tgatggagag ctttttagaa
    15961 aaaaagtgat ttatgtcgga gatggaaatt cctatgttca ccaaggaaat tcctcggagt
    16021 tttcgattaa tgaagattta acgaagttaa tcatttttat gaacaatccg gagattcctc
    16081 ttattatcaa atcaattatt acgcactatt tttttgagta tgtacatccc ttctatgatg
    16141 gaaatggtag aatggggcgt ttcctaatgt catcctatct gtctagaaaa ttagattttt
    16201 taacagggtt gtctctgtcg gagtctgttt tgcaaaataa gagtaagtat gaggagggtt
    16261 tctcaattac ttctcaccct aaaaatagag gtgatttgac cccgtttgta gggaccatgc
    16321 tagaaatcat tttaaatgca caagagaaca tgaagactaa gttgggcaag ttgaagtcac
    16381 aattagatag agtgtggatc ttgatagatg gtctagacct gacgggacct caaaaagaat
    16441 tgttgtttat actttcccaa gataagcttt ttgatgtttt gcatactggc gtcagcaaca
    16501 aggaattaac ggaagcattt ggcggaaaat acaaaaggac gagaattgat tctactctga
    16561 aaacactgga aggaatgggc ttagtgacaa aagtgaaatc atccccagtc atttatgaag
    16621 ttagttctaa tttgataaaa gatatttaat agcaccggcc tcggctgggc ttttttggct
    16681 gttctccatc attttgcacc tgcctatcga gagaattttt ggtataatgg agggtatgat
    16741 tataatgaac ctgtatttac agtttagcac tttcatctaa gcctagtttt tcagctattt
    16801 atcgtttgtt tttccaaaaa tacagtcggt atttcctcaa aaaattacct tgattagcta
    16861 taaacgattt cctatttgaa agtgaattac ttgtaaatac atgttctagg aaagtatgag
    16921 aaaatgaacc cattattaaa cggaatgaat gacagacagg cagaagcggt acagacgacg
    16981 gaaggtccgc ttttgattat ggcaggggct ggttcgggta agacgcgagt cctgacccac
    17041 cgtatcgctt atttgattga tgaaaaaatg gtcaatcctt ggaatatcct agccattacc
    17101 tttactaaca aagcggcgcg tgagatgaag gagcgggcct atgccctcaa tcctgctacg
    17161 caagattgct tgattgctac cttccactcc atgtgtgtgc ggattttacg ccgagatgct
    17221 gatcatatcg gctacaatcg caattttacc attgtcgatc caggtgagca acgcagtctc
    17281 atgaaacgga ttttgaaaaa tctgaattta gatccgaaaa agtggagtga acgttctatc
    17341 ctgggaacca tttccaatgc caaaaatgac ttgattgatg acaaggcatt tgaagcccag
    17401 gcaggcgacc tatacacgca gattgttgct aaatgctaca cggcttatca aaaggaacta
    17461 agacagtcag aggccgttga ctttgatgat ttgatcatgt tgacgctccg cctttttgac
    17521 caaaatccag aggtcctgac ctattaccag cagaaattcc agtatatcca tgtcgatgag
    17581 tatcaggata ccaaccatgc ccagtaccaa ttagtcaagc tcctggcatc acgtttcaag
    17641 aatatctgcg tggtcggaga tgcggaccag tctatctatg gttggcgtgg tgcggatatg
    17701 caaaatatcc tggactttga aaaggactat ccagaaagta aggttgtgct tttggaggaa
    17761 aactatcgtt cgaccaagaa cgtcttgcag gctgccaatg aggtcatcga aaacaaccgc
    17821 aatcgccgtc caaaaaaact ctggacacag aatgcccaag gggatttgat tacctactat
    17881 cgtgcaagag atgaaaatga cgaggcgatt tttgtcgcag ggcagattga ccagttgcac
    17941 cgagaaggta aggcctataa ggattttgca gttctctacc gtaccaatgc ccaatcccgt
    18001 accattgaag aagccctgct caaatctaat atcccttata ccatggttgg cggcaccaag
    18061 ttctacagcc gtaaggaaat tcgagatgtg atttcttatt tgaatatcat cgcaaatcca
    18121 tcggataata tctcttatga acgcattgtc aatgagccaa aacgtggcgt tggccctggt
    18181 acggttgaca aactccgtga ttttgcgacc agccacagca tgtccttgct agaagcttct
    18241 caggatatta tgttgtcacc agtcaagggc aaggcagcac aggcagtctt tgacttagct
    18301 aatctcctct ataatcttcg caatcaatta gacaacttga ctgttaccca agtagtcgag
    18361 gcagtattga atcaaacagg ctacatcgat gcccttgcag cacaaaatac gctggaagca
    18421 aatgcccgca ttgaaaacat ccaggaattc ctgtctgtta ccaaaaactt tgatgaaaag
    18481 gatgttgagg aagaagagac aggtctggat cggttgacac gcttcctgct tgatttggcc
    18541 ctgattgctg acacagatga tggcgataca gaatcttcag aagtgactct tatgaccctc
    18601 cacgcagcca aaggtctgga atttccagtc gtattcctga ttggtatgga ggaaaatgtc
    18661 ttcccactta gtcgtgcagc agaagaagag gacgaattgg aagaagaacg tcgtttggct
    18721 tacgtaggca tcacccgtgc tgagcagact ctctacctga ccaatgccaa ttctcgactc
    18781 cttttcggtc gcaccaacta caaccaacca agccgcttta tccgagaaat ttccagtgac
    18841 ttgcttgatt atcaagggct cgctcgtcca gccaatacta gctttaaggc ttcttatgtc
    18901 aatggcagag cgacacagtt tggacaaggc atgagcttgc aacaagcctt acaaagtcga
    18961 aaagcatccg tacaaccatc agccaagctc ggaggaagta tgcccttcgc atcaagcaac
    19021 cgatcgtcaa gctcaggcac caactggtca gttggtgaca tcgcagtcca caagaaatgg
    19081 ggacgcggga cagtccttga agtatcaggc tcaggcagca accaagaact caaaatcaat
    19141 ttcccagaaa tgggcctcaa aaaagtcttg gcaagcttag caccgattag taaggaagat
    19201 taaatttagt taaaaaacaa ttgcagtaag ctcgaaaata tgataaagta tttttgtaaa
    19261 attgaataga acatttgggg tgccaagagg ctgagattat acccatcgaa cctgatgcag
    19321 ttaggactgc cgaagggaaa tgtgtatcaa caaattttgt tgacaagtac tatatttgta
    19381 ttctagtata gaatactgta tttactggtc atcaatcatc gtaggtgtaa ctccatttga
    19441 taaaccatca gatggagttt tttctattgt cgaatgaaga gctttcagaa aaaggaactg
    19501 agtgcaggta gcttgaccag cctagaggct atactacgtt ggaaatgaga catgcgcaac
    19561 atgtcacttt cgtagagttc ggcaaggcga aactgatgat aaagctaata caattaacaa
    19621 tatcttcaca aatacctcaa acccttcaat ttacattttc accgagaaaa agagaaagga
    19681 gatatagatg aacaaaatgg tcatttggtt tgaccttgat ggcgttattt ttgattccta
    19741 tgatgtctgg gaccaggtgg ttcaagggat tttgaaactt cacggagttg cgtataccca
    19801 gcagataaag gaagaacttt ggcggattcc aatggaagat gtcaacgcgt atttattgca
    19861 acttgtggag aattccttag atgagaatga gcttgaaagg caaaaaatga atcaactgca
    19921 atcactatat agagatattt ccttgatgga tggtgtgcat gaacttttat ctacattgaa
    19981 ggcaaaaggt gcagtcatgt acgcagtcac ttcaaactat ctggagctgg ctgaactagg
    20041 attgtcatcc catcatctat ctaactattt tgtgaaacta tttagcagtt tggatctgtt
    20101 tggaagcgat aaaaataggg agttttacca attcatccta catcaggaac agatagatcc
    20161 agccaatatc gtaatggtcg aggataatat gaacaatctt cgtattggac acgagttagg
    20221 aatagcggga gtttatatag aacatccaaa ttcccctttt tctgatgaga atacaggtat
    20281 agttagcatc aagcaattaa gtgaattaat accaattttg gaggatagaa aatgacatct
    20341 ttacatgtag cattatcaat agcaggaaca gatccaacag gcggagcagg cattatggct
    20401 gatttgaaga gctttcaggc tagatcagtt tatggtatgg cagtcgtgac gagtgtcgtt
    20461 gctcaaaata ccaaaggggt gcaactaatt cgtcatcttg atcaggaaat tttagaagaa
    20521 caattgaaaa gtgtctttca ggacattgtt ccagatgcaa taaaaactgg aatgttagca
    20581 caagtcgaga ccattgagct tgtcgcaagc tatcttgcaa aacagaagtg tccatatgtc
    20641 ttggatcctg ttatggtcgc aacgagtgga gaccgtttga ttgaagagga tgcaatccaa
    20701 gcgctgaaaa caaaattact gccccttgct accatcatta caccgaatct accggaagca
    20761 gaagttctag tcggtagaac actgaaaagt gaaaatgaca tcatgaatgc gggccgttgg
    20821 attcggaaag aatttgggtt aaaaaatgtg gtcattaagg gtggtcatct ggcaaaggcg
    20881 gcatctgact acttattttt agaagatggt gagattagtg tcatcagttc agcacgcatt
    20941 tctacgaacc atacccatgg tacaggttgt acctacgcgg cagtcattac tgcagagttg
    21001 gcgaaaggtc ggacagtagc aaaagcagtc gaaactgcca aacgatttat tacagaagca
    21061 attcagactg ctccagaact ggggcatgga aatggtcctg tcaatcatac cacctacaga
    21121 ggagagtaac tagatgtatt tggaaaaatt acgtagtcaa aatcccttga ccatttgtat
    21181 tacgaatgat gtagtcaaaa attttacagc taatggctta cttgctctcg gtgcctcacc
    21241 tgcaatgagc gagtatccag aagatttgga ggatctactt ccctatgcaa aggggttatt
    21301 gattaataca ggaaccttga ccaatgaaac ttgggaacta tacaaatctg ccttggatat
    21361 tgctgagaaa tatggtgtac ctactgtctt agatcctgtt gcggcaggtg ctggtgccta
    21421 tcgcaagaaa gttaccttgg atctgttaca tcatcatact atttcactcg ttcgtgggaa
    21481 tgcaggagaa attgcagcct tgattggtga aagtattgaa acgaaagggg tagattctgc
    21541 tcagattgac aatgtaggtg aacttgctct cagagctaac caacaattag gaattcctgt
    21601 tgtgattaca ggaaaaaaag atgctgccgc tgtgaatcat caggttcgga ttttggaaaa
    21661 tggtagtgag ttaatgccac tagtgacagg gacaggatgc ctactgggag cagttctggc
    21721 tgcctctatt cacctggctg atgaggattc attattggat tgtttggaag aggtcctatc
    21781 ggcttattcg atcgctggag aaatggcaga gcagaaaacc ttactaccag gaaccttcca
    21841 gattgagttt ataaatagcc tctatgctat tcaatcagaa gaggttgaag aaaataaaaa
    21901 ggtcattcag tatgaataga aaaatgcttc aagtttactt tatttgtggc acgtcagatt
    21961 gtccaaaagg caaatttttg gatgtactgg aaaaggcatt gcaggcagga atcacttgtt
    22021 ttcaatttcg tgaaaaaggt gagcaaggtt taacaggggc tgataaacta ctgttggcaa
    22081 aacaagttca acacctgtgt caccgctatc aggttccatt aatcattaat gatgatgttg
    22141 agttagcacg tgccattgat gctgatggaa tacaccttgg acaggaagat ttgtcagtag
    22201 tagaagcgag acagctcttc ccagggaaaa taattggact atcagttgga acaaaagaag
    22261 aatacctcaa ttcgcctatt gatctagttg attatatcgg aagcggacct gtttttccta
    22321 ctctatctaa ggatgatgct agcccagcca ttggaatgga tggattaaag caattaagga
    22381 aactcaattc cgatattccc atggttgcga taggagggtt atctgctaaa gattgtaagg
    22441 aagttctcca agcaggtgca gatggcatag ctgttatctc agccatttcc catgctgaag
    22501 acccctacaa agcaaccaag atattggtgg atgggatgca agcaatgatt ttaaaattta
    22561 atcaagtaga atctaataaa caaatactaa aaagtcccta atca
//
LOCUS       DASFQD010000026        22103 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.026, whole genome shotgun sequence.
ACCESSION   DASFQD010000026 DASFQD010000000
VERSION     DASFQD010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 22103)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22103)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22103
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.026"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..1332
                     /gene="celB"
                     /locus_tag="U1021_000761"
     CDS             <1..1332
                     /gene="celB"
                     /locus_tag="U1021_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose transporter subunit IIC"
                     /protein_id="HEM4711328.1"
                     /translation="FFGLLDKYLMGPMGKLASYKVVRAITAAGMAAVPFTIVGSMFLV
                     FSILPQAFSFWPIVSDIFAASFDKFTPLYMVANTATMGVLSLYFALAIGYELTKIYAE
                     EEELNLTPLNGALLSLFAFIMTVPQIIFENGAMSAVTSLKEGAVVVDGWAMGGGVTRF
                     GTTGIFTAIIMAVAAVLLYRMCVKNNWVIKMPESVPEGVSRGFTALIPSFVVAFFVIF
                     LNGVLVALGTDIFKVIAIPFSFVGNLTNTWIGLVIIYLLTQALWVVGIHGANIIFAFV
                     SPIALANMSLNAAGERMIVAGEFSNMFVIAGGSGATLGLCIWLATRARSEQLSAIGKA
                     AIVPGIFNINEPLIFGLPIIYNPALAIPFMLAPIASMTVYYFSMKLNLINAVVAQVPW
                     PTPVGIGAFLGTADWRAIVVSIVCAVVVFLVYYPFIRAYDKQLLKEEAANA"
     gene            1738..3204
                     /gene="ascB"
                     /locus_tag="U1021_000762"
     CDS             1738..3204
                     /gene="ascB"
                     /locus_tag="U1021_000762"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HEM4711329.1"
                     /translation="MTKQFPKGFLWGGATAANQYEGGWNLGGRGPATSDTYIAVDPDK
                     RKDMSHFGKPVSRADVEFALADQEGLYPKRWGSDFYHRYKEDIALFAEMGFKTFRLSI
                     AWSRIFPKGDELEPNEEGLAFYDAVFDNLNKYGIEPLVTLSHYEFPIHLALEYGGWKN
                     RKVIEFFVRYAETVFKRYQGKVKYWLTFNEINILGMVGYLSGGLLFEDGKNDLEAMYQ
                     AVHHQFIASILATKAAHEIDPENKVGCMLARMENYAATCNPDDVLAALKKDQENLFYT
                     DVQVRGAYPSYMKRFFKENNIQVVFEPGDEAILKQYPVDFMSFSYYMTSITRALPDKD
                     KATAGNLMLGEANPYLEASDWGWQIDPVGLRITLNKLYDRYQVPLFIVENGLGALDKV
                     EEDGSIEDSYRIAYLEKHIQQMYEAIEDGVELMGYTPWGCIDLVSASTSEMSKRYGFI
                     YVDADDQGKGSFDRSRKASFYWYKDVIASNGANLLTEK"
     gene            3213..3815
                     /locus_tag="U1021_000763"
     CDS             3213..3815
                     /locus_tag="U1021_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM4711330.1"
                     /translation="MTKTIYLMRHGETLFNTQKRVQGWSDFPLTERGIVQAQAVGQYF
                     KEQGIIFTSAYSSTQERATDTLKLVTDAPYQQLKGLKEMNFGIFEAREEELLPKPRPG
                     ARSFEDLLVPFGGEDIRAVGSRVKEAILSVAESDPADPILMVSHGAAIWGLVQVLEVT
                     FPPGVFLPNCAICQLTVEQNQIRFEKLIDSAHDFKVYDFK"
     gene            3827..4444
                     /locus_tag="U1021_000764"
                     /pseudo
     CDS             3827..4444
                     /locus_tag="U1021_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937720.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
     gene            4441..5877
                     /locus_tag="U1021_000765"
     CDS             4441..5877
                     /locus_tag="U1021_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HEM4711331.1"
                     /translation="MTRKVFPKGFLWGGATAANQCEGAYDVDGRGLANVDVVPIGEDR
                     AAIITGRKKMFDFEDGYFYPAKESIDMYHHFKEDIALFGEMGFKTYRLSIAWSRIFPK
                     GDELEPNEKGLQFYEDLFKECHKYGIEPLVTITPFDCPMHLIETYGGWRNRKMLEFYE
                     RLCRTLFTRYKGLVKYWLTFNEINMILHAPFMGAGICFEEGENVEQVKYQAAHHELVA
                     SAIATKLAHEIDPENKVGCMLAAGQYYPHTCHPRDVWEALQEDRENYFFIDVQARGYY
                     PNYAKKKWEREGIEIEMTDQDLALLKEHTVDFISFSYYSSRVASGDPAEKEKTAGNIF
                     ASIKNPYLDASEWGWQIDPLGFRITLNTIWDRYQKPLFVVENGLGAVDIPDENGYVED
                     DYRIDYLRQHVLAMRDAIVEDGVELLGYTTWGCIDLVSAGTGEMKKRYGFIYVDRDNE
                     GNGTLKRSKKKSFEWYKKVIATNGADVG"
     gene            5961..6950
                     /locus_tag="U1021_000766"
     CDS             5961..6950
                     /locus_tag="U1021_000766"
                     /EC_number="6.3.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014677692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase"
                     /protein_id="HEM4711332.1"
                     /translation="MKYIVNNSNDPAYNIALEAYAFKELTDIDEIFILWINEPAIIIG
                     KHQNAIEEINKEFTDEKGIHVVRRLSGGGAVYHDLNNLNYTIISNKADEGAFDFKTFS
                     KPVIDTLATLGVEANFTGRNDLEIDGKKICGNAQAYAKGRMMHHGCLLFDVDMSVLAN
                     ALKVSKDKIESKGVKSVRARVTNINNELPEKMTVLEFKDAILNQMKQEYPDMDEYVLS
                     EDDLARIQEIRDTQFATWDWTYGQTPEYTVERSVRYPAGKITTYIKAEKSVIESIKIY
                     GDFFGIGDVSDIEDLLVGTRYEYADVLAKLQEIDTTHYFSRMTTEEVAKAIVA"
     gene            7122..7412
                     /locus_tag="U1021_000767"
     CDS             7122..7412
                     /locus_tag="U1021_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018030687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEM4711333.1"
                     /translation="MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATIVESKAWE
                     KRRLAYEIKDFREGLYHIVNVEANNDEALKEFDRLSKINGDILRHMIVKLDA"
     gene            7424..7918
                     /locus_tag="U1021_000768"
     CDS             7424..7918
                     /locus_tag="U1021_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEM4711334.1"
                     /translation="MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGER
                     EADFINVVIWRQQAENLANWAKKGALIGVTGRIQTRSYDNQQGQRVYVTEVVAESFQL
                     LESRTAREGQGGGYSAGNSFAGGNDYNSPYQAPAQSTPNFAREESPFGASNPMDISDD
                     DLPF"
     gene            7951..8190
                     /locus_tag="U1021_000769"
     CDS             7951..8190
                     /locus_tag="U1021_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002983142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEM4711335.1"
                     /translation="MAQQRRGGFKRRKKVDYIAANKIEYVDYKDTELLSRFISERGKI
                     LPRRVTGTSAKNQRKVTTAIKRARVMALLPFVNED"
     gene            complement(8425..9081)
                     /locus_tag="U1021_000770"
     CDS             complement(8425..9081)
                     /locus_tag="U1021_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1129 domain-containing protein"
                     /protein_id="HEM4711336.1"
                     /translation="MSFTEINGLTKKNQEFIHIATNQLIKDGKSDSEIKELLEEILPT
                     IIEKQKTGVTARNLYGAPSEWAASKTISEQEKKDQVEYNENPWLMWLDSSLFMLAIIA
                     GINGLMNLFGQGAQYGLLTLFVIGFGVGAGMYLMYHFVYREQIKTGQRPKLLKAIAFL
                     GLATLAWSVVFILAALIPAAFNPVLPPLVTILIGAAAFGARYLLKKKYNIRNAMSPVQ
                     "
     gene            complement(9097..10041)
                     /locus_tag="U1021_000771"
     CDS             complement(9097..10041)
                     /locus_tag="U1021_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004250490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEM4711337.1"
                     /translation="MKQIFLSTMTDLEEIQTFEPGAWINLVNPSQSESMEVAEHYKID
                     IADLRAPLDAEESSRITVEDDYTLILVDVPILEERNNKTYYITIPLGIILTDDAIITT
                     CLEPLPLFEQFIHRRLRNFFTFMKSRFVFQILYRNAQLYLSALRTIDRKSEEIEKQLH
                     EATRNEELIVLMELEKTIVYFKASLKTNERLVKKLASSSRLLRKYEEDEDLLEDTLVE
                     TQQAIEMADIYGSILNSMTHAFASIISNNQNTIMKTLALVTIVLSIPTMVFSAYGMNF
                     KDNIIPFNDIPYAFWWIILFAFAISLSLTFYFIRKRWF"
     gene            10835..13660
                     /gene="uvrA"
                     /locus_tag="U1021_000772"
     CDS             10835..13660
                     /gene="uvrA"
                     /locus_tag="U1021_000772"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003037804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEM4711338.1"
                     /translation="MQENIVIHGARAHNLKNIDVTIPREKLVVVTGLSGSGKSSLAFD
                     TLYAEGQRRYVESLSAYARQFLGNMDKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTA
                     TEINDYLRLLYARVGVPYCINGHGAIAASSVEQIVDEVLELPERQRLQILAPIVRKKK
                     GQHKTIFEKIQKDGYVRVRVNGDVYDVSEVPELSKSKAHNIEVVVDRIVIKEGIRSRL
                     FDSIEAALRIADGYVIIDTMDEKELLFSEYYACPVCGFTVPELEPRLFSFNAPFGSCS
                     DCDGLGMKLEVDTDLIVPDASKTLREGALAPWNPISSNYYPQMLEQAMNHFGVDMDKP
                     FEELTDEEKNLIFNGSDGKEFHFHYENEFGGVRDIDIPFEGLITNINRRYRETNSDYT
                     RTVMKTYMNELTCGTCHGYRLNDQALSVKVGGEQGLHIGQLSDLSVADHLEVIENLTL
                     SENEATIATPIVKEIKDRLTFLNNVGLNYLTLSRAAGTLSGGESQRIRLATQIGSNLS
                     GVLYILDEPSIGLHQRDNDRLIASLKKMRDLGNTLIVVEHDEDTMREADWLIDIGPGA
                     GVFGGEIVASGTPAQVAKNKKSITGQYLSGKREIPVPLERRVGNGRFLEVTGAKENNL
                     QDVTVRFPLGKFVAVTGVSGSGKSTLVNSILKKAIAQKLNRNSDKPGKFKSISGIEHL
                     DRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNEAKIRGYKKGRFSFNVKGGRC
                     EACSGDGIIKIEMHFLPDVFVPCEVCHGHRYNSETLEVHYKEKNIAQVLDMTVNDAVE
                     FFKHIPKIERKLRTIQDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSLYIL
                     DEPTTGLHTEDIAQLLKVLARFVDDGNTVLVIEHNLDVIKTADHIIDMGPEGGVGGGT
                     VVATGTPEEVAENPASFTGQYLKMKLK"
     gene            13759..14820
                     /locus_tag="U1021_000773"
     CDS             13759..14820
                     /locus_tag="U1021_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEM4711339.1"
                     /translation="MQKRLEKFEAKLAQSTVDGILVTGQNNIYYLTGFWGTEATVFIS
                     GKRRLFVTDSRYTLIAKASVKGFDIIESRFALEEIAKVIKEDGLEKIGFDSEVTYGFY
                     QSLTSIFEGYQLVAMSNFIEDLRMIKDEKEIATIRRACQISDQAFIDVLDFIKPGQTT
                     EMDINHFLDHRMRQLGAEGASFEFIVASGYRSAMPHGRASEKVIQAGETLTLDFGCYY
                     QHYVSDMTRTIHIGHVTDQEREIYDVVLRANKALIEQAKEGVTYREFDAIPREIINEA
                     GYGANFTHGIGHGIGLDIHEYPYFGKSDEPIKAGMVLTDEPGIYLDDKYGVRIEDDLL
                     ITETGCEVLTLAPKELIVI"
     gene            14885..15442
                     /gene="efp"
                     /locus_tag="U1021_000774"
     CDS             14885..15442
                     /gene="efp"
                     /locus_tag="U1021_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000568636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEM4711340.1"
                     /translation="MIEASKLRAGMTFETEGKLIKVLEASHHKPGKGNTIMRMKLRDV
                     RTGSTFDTTYRPDEKFEQAIIETVPAQYLYQMDDTAFFMNTETYDQYEIPVATIKEEL
                     LYILENSDVKIQFYGTEVIGVTVPTTVELVVAETQPSIKGATVTGSGKPATMETGLVV
                     NVPDFIEAGQKLVINTAEGTYVSRA"
     gene            15469..15861
                     /locus_tag="U1021_000775"
     CDS             15469..15861
                     /locus_tag="U1021_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HEM4711341.1"
                     /translation="MTTEYQGEIVIAPRVLEVITGIAAAKVEGVHSLHNKRVADTWSK
                     SSLNKGVYLQTDDEGKVTADIYVYLEYGVNVPAVSMDIQRAVKTAIYNYAEVEVTAVN
                     IHVNGIVPDKTPKPALKDLFGEDFLDEE"
     gene            15851..16270
                     /gene="nusB"
                     /locus_tag="U1021_000776"
     CDS             15851..16270
                     /gene="nusB"
                     /locus_tag="U1021_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEM4711342.1"
                     /translation="MKNNRHALRKCALQAIVSLEFGQEPVQAAQFSYLYDREDEQEGV
                     EIPLFLLNLVNGVADYREDLDKELSSRLKAGWTLDRLTLIDKNIMRLGLFEILHFEET
                     PDRVAVNEAIELAKEFSDESSAKFINGVLSQFIKEEA"
     gene            complement(16350..17315)
                     /locus_tag="U1021_000777"
     CDS             complement(16350..17315)
                     /locus_tag="U1021_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM4711343.1"
                     /translation="MVAKLTDVAQLAGVSPTTVSRVINKKGYLSEKTIRNVEEAMREL
                     GYKPNNLARSLQGKSAKLVGLIFPTINNIFYSELISHLEKELFDRGYKTIICNSQHES
                     DKEREYLEMLAANQVDGIISGSHNLGIQDYDRVVAPIIAFDRNLSPSIPIVSSDNFAG
                     GVLAAQTLQKAGCHNPLMITGNDDSNSPTGLRQVGFTSILNKAEVFHISSDFSPVRKE
                     MEIRAILEKQKPDGIFVSGDATAMLVWNVIRSMKLSIPEDIKLIGYDGTSFIENYYPQ
                     LTTIKQPLTEIARLLVELLVDKIEGKKLTKTDYILPISLLAGASI"
     gene            complement(17296..18750)
                     /locus_tag="U1021_000778"
     CDS             complement(17296..18750)
                     /locus_tag="U1021_000778"
                     /EC_number="3.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000455313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose-6-phosphate hydrolase"
                     /protein_id="HEM4711344.1"
                     /translation="MAFTTEERYRAYADWTPEYIEKIKKNTESSPWRTNFHIETPHGL
                     LNDPNGFSYFNGKWTLFYQYFPFGAAHGLKSWVHTESTDLVHFEETGTVMYPDTPLDS
                     HGAYSGSAMEFGDKLFLFYTGNVRDENWVRHPYQIGALMDKDGKIEKIDKVLIEQPED
                     TTDHFRDPQIFNYKGQYYAIVGGQNLDKKGIVKLYKAENNDYLNWSYVGDLDFANDMT
                     AYMMECPNIAFVGEQPILLYCPQGLDKEVLDYGNIYPNMYKIGQSFDPETASIVEPIE
                     LINLDYGFECYATQAFNAPDGRTLSVSWLALPDVEYPTDAYDYQGCLSLVKELTIKDG
                     KLYQYPVDAITSLRKEAQPFSAQKETNNVYELELDFSAGTKHEIVLFANEAEKGLVLS
                     VDTEQGQITLDRGNCGQPFALDFGTSRSCEISPGALTANIFIDKSVFEIFINKGEKVF
                     SGRVFPDADQSGIVITTGNPTGTYYHLDYGRKTN"
     gene            18955..20880
                     /locus_tag="U1021_000779"
     CDS             18955..20880
                     /locus_tag="U1021_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS beta-glucoside transporter subunit IIBCA"
                     /protein_id="HEM4711345.1"
                     /translation="MDYKKVSAEVIEAVGKDNLVAAAHCATRLRLVLKDESKVNQKAL
                     DDNADVKGTFSTNGQYQVIIGPGDVNFVYAELIKATGLKEVSTDDLKQIAAQDKKFNP
                     LMDLIKLLSDIFVPIIPALVAGGLLMALRNFLTSPDLFGPKSIEEMYPAIQGISAMIQ
                     LMSAAPFMFLPVLVGISAAKRFGANQFLGAAIGMIMTTPDLGGKEAFWDIFGFQVAQT
                     NYAYQVIPVLAAVWLLATLEKFFHKKLPSAVDFTFTPLLSVMITGFLTFTVIGPVMLT
                     VSDAITNAIVWLYDTTGALGMSIFGGTYSLIVMTGLHQSFPAIETQLLSAYNNNGTGY
                     GDYIFVVASMANVAQGAATLAIYFLTKNAKTKGLSGSAAVSAFLGITEPALFGVNLKY
                     RFPFFCALAGSAIGALFAGLTHVIAVSLGAAGFIGFLSIKASSIPMYVVAEVIAFAAA
                     FAFTYVYGKTKASAVFADEAATASVVETSEEVEETAEIFTAQETLVSPLSGDVVALEN
                     VNDPVFSSGAMGKGLAVKPSEGVVYAPADAEVTIAFETGHAYGLKTASGAELLIHIGI
                     DTVSMNGNGFEKLVAAGDKVKAGTPIAKFDATKIAEAGLDDTTMIIVTNTADFAEVSP
                     LAEGTIAHGVEFLKVAK"
     gene            21008..21892
                     /locus_tag="U1021_000780"
     CDS             21008..21892
                     /locus_tag="U1021_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM4711346.1"
                     /translation="MTKLYGSLEAGGTKFVCAVGDENFQVVEKTQFPTTTPYETIERT
                     VEFFKRYEDRLAGIAIGSFGPIDIDQNSQTYGYITSTPKPHWSNIDLLGLIAKEFNIP
                     FYFTTDVNSSAFGETLVRKGVKSLVYYTIGTGIGAGAIQNGEFIGGLGHTEAGHTYVA
                     LHPYDVKHEFKGMCPFHNGCLEGLAAGPSLEGRTGIRGELIELNSDVWDVQAYYIAQA
                     AVQATLLYRPQVIVFGGGVMAQEHMLNRVREKFVGLMNDYLPTPDVKEYIVTPAVAEN
                     GSATLGNFALAKQVSRNS"
BASE COUNT         6244 a         4385 c         5069 g         6405 t
ORIGIN      
        1 ttctttggac tattagataa atatctgatg ggaccaatgg gtaaactggc atcttacaaa
       61 gttgtacgtg ccatcacagc tgcaggtatg gctgccgtac catttacgat tgttggttcg
      121 atgttcttgg ttttcagtat cttaccacag gcattttcat tctggccaat cgtttcagat
      181 atttttgcgg catcttttga taaatttacc ccactctata tggttgccaa tactgctact
      241 atgggggtgc tatcacttta ttttgcactt gctattggat atgaattgac aaaaatttat
      301 gctgaggaag aagagttaaa tctaacacct ttgaacggtg cccttttatc acttttcgct
      361 ttcataatga ctgtgccaca aattatcttt gaaaatggtg ctatgtcagc agttacttca
      421 cttaaagaag gtgcagtagt tgtagatggt tgggcaatgg gtggtggcgt gacacgcttt
      481 gggacaacag gtatcttcac tgctatcata atggcggttg cagcagttct tttgtaccgc
      541 atgtgtgtaa aaaataactg ggtaattaaa atgccagaat ctgttcctga gggtgtgtct
      601 cgtggtttca ctgctttgat tccttcattt gtcgtagcct tctttgtaat tttcttgaac
      661 ggtgtattgg ttgcgcttgg tactgatata tttaaagtta ttgcaattcc atttagcttt
      721 gttggaaatt taacaaatac ttggattggt ttagttatta tctacttgtt gactcaggca
      781 ctttgggtag taggtattca cggtgcaaat atcatctttg cttttgttag tccaattgca
      841 cttgcaaata tgtctcttaa tgcagctggt gaacgaatga ttgttgcagg tgaattttca
      901 aacatgttcg tcattgcagg tggttctggt gcaacacttg gactatgtat ttggttagct
      961 actcgtgctc gttctgaaca attgagtgcg atcggtaaag cagcaattgt tccgggtatt
     1021 ttcaacatca atgaaccact gatttttggt ttgccaatca tctataatcc agcacttgca
     1081 atcccattca tgcttgctcc aattgcatct atgacggtgt attacttctc tatgaagttg
     1141 aatcttatca atgcagttgt tgctcaagta ccatggccaa ctccagttgg tattggtgcc
     1201 ttccttggta cagctgactg gcgtgcaatt gttgtttcaa ttgtttgtgc agttgttgtc
     1261 ttccttgttt actatccatt cattcgtgca tacgataaac agttgctaaa agaagaagcg
     1321 gcaaatgctt aaactaaaga aactccttga cttcttctaa gtccaaggag tttttctata
     1381 agagaatatc aggagacatt gttagataaa cataagatag tatcatattt gctttcttct
     1441 ttctaaatca gaggagctga ggtagggcaa gagaagaaga ttttttatag ctgacttgat
     1501 gaagcgacta tcaatacata tggaggctta aaaatatctc tactactttt gctaatacta
     1561 atcgatagaa aacctctccc ttgttccaag ttttaattgg gatattatct aatgttttaa
     1621 gaatagtgat aattggaaat agcatagaat agtatcagtt tggcatatta tcacgtagga
     1681 atgaagggag ttcttttgct attatatagc taataaagtc agaaggagta ttgtgctatg
     1741 acaaaacaat ttccaaaagg atttctttgg ggcggtgcga cagcggccaa ccaatatgaa
     1801 ggtggttgga atttgggagg tcgtggtcca gccacttccg atacctatat agcggtcgat
     1861 ccagataagc ggaaggatat gagtcacttt ggtaagcctg tttcgcgggc tgatgtggaa
     1921 tttgccttgg cagatcaaga agggctctac ccaaaacgtt ggggttctga tttctatcat
     1981 cgctacaagg aagacatcgc cctctttgca gaaatgggct tcaagacctt ccgcttgtcg
     2041 attgcctggt ctcgtatttt tccaaaagga gacgagttag aaccgaatga agaaggactg
     2101 gccttttatg atgcggtctt cgataatctg aataaatatg gtatcgagcc actggtgacc
     2161 ctatctcact atgaatttcc tattcatctt gctctggaat acggcggctg gaaaaaccgt
     2221 aaggtcatag agttctttgt tcgctatgcc gagacagtat tcaaacgcta tcagggtaaa
     2281 gttaagtatt ggctgacttt taatgaaatc aatattttgg gcatggttgg ttatctatca
     2341 ggcggtcttc tctttgaaga cggaaagaat gacctagaag ccatgtacca agcagttcac
     2401 catcagttta tcgcttctat tttggcaaca aaagctgccc atgagattga cccagaaaac
     2461 aaggttggtt gcatgctggc acggatggag aactatgcgg ccacctgcaa tccagacgat
     2521 gtcttggcgg ccttgaaaaa agaccaggaa aatctcttct atacagatgt gcaggtgcgt
     2581 ggagcctacc caagttatat gaaacgcttc ttcaaagaaa acaatatcca ggtcgtgttc
     2641 gagccgggag acgaagcgat tttgaaacaa tatcctgttg atttcatgag tttttcttac
     2701 tatatgacat ccatcacccg tgctcttcca gacaaggaca aggcaacggc aggtaatttg
     2761 atgttaggag aggccaatcc ttatctggaa gcatcggact ggggctggca gatagaccct
     2821 gtcggacttc gtatcaccct caacaagctt tatgaccgtt accaagttcc cctcttcatt
     2881 gtagaaaatg gtttgggagc cttggataag gtggaggaag atggcagtat tgaggacagc
     2941 taccgtattg cctatctgga aaaacatatc cagcaaatgt atgaagccat tgaagacggt
     3001 gtggaactca tgggctatac cccttggggc tgtatcgacc tagtttctgc ttctaccagc
     3061 gaaatgtcca aacgctacgg ctttatctat gtggatgcgg acgatcaagg aaagggcagt
     3121 tttgaccgtt cacggaaggc atcattctac tggtacaaag atgtcattgc cagcaatgga
     3181 gccaatctat taacagaaaa ataggaggtt ttatgacaaa aacaatttat ctcatgcgtc
     3241 atggtgaaac cctctttaat acgcaaaaac gagtgcaggg ttggtcggat tttcccttga
     3301 cagaacgtgg tatcgtccaa gcccaagccg ttggtcagta ttttaaggag cagggcatca
     3361 tcttcaccag tgcctattct tccacgcaag agagggctac tgatacgcta aaattagtca
     3421 cggatgctcc ctaccaacag ctcaaggggc tcaaggagat gaacttcggg atttttgaag
     3481 ccagagagga agaattactt cccaagcctc gtcctggagc gcgttctttc gaagacctgt
     3541 tggttccatt tggaggcgag gacattcgag cagttggaag tcgtgtcaaa gaggcgattc
     3601 tctctgtcgc ggaaagcgat ccagctgatc caatcctcat ggtcagtcat ggtgcagcca
     3661 tttggggatt ggtgcaggtt ttggaggtca ccttcccacc aggcgtcttt ctgcccaact
     3721 gtgccatttg ccagctgact gttgaacaga atcagatacg atttgaaaaa ttgattgatt
     3781 ccgcacatga ttttaaggtc tatgacttta agtagggagg tttagtatga actatcttta
     3841 cttgatgcgt catggccaga cacggttcaa cctccaagga cggattcaag gtgcttgtga
     3901 ttctcccctg acggaagaag gaaaagagca agcacgggct gctggtcggt attttcaaga
     3961 gcaggctatc tcttttgata agatttattc ttccacccaa gaacgggcct gtgatacggc
     4021 agaattggta acagggagga cggactatac ccgcttgaaa gggttgaaag aacaggattt
     4081 cggagccttc gagggtcaac aggaatacct caatcctccc ttacagggag acattggcta
     4141 cggtgattat tttgtcacct ttggaggcga atcctatcga gatgtccgaa aacgtatgga
     4201 agaaaccatt ggaggcatta tggaataagc ggacaatcaa tccgttttag tagttagcca
     4261 tggagctgcc attgcccaat ttttcagaca ggtattgaca ggttttccgc gagtgcggat
     4321 gcgaaattgt gccatactga cttttactta tgaagacggt cactacgatt tgcaaagcat
     4381 tgtggatccc gttcataaag aaactctcta tcaaaaagaa ggacaggaaa aggagaaaag
     4441 atgacaagaa aagtatttcc aaagggattt ttatggggtg gcgcgacagc agccaaccaa
     4501 tgtgaaggtg cttacgatgt agatggacgt ggccttgcca acgtcgatgt cgtgccgatt
     4561 ggcgaagacc gggctgccat tatcactggt cgtaagaaga tgtttgactt tgaggacggc
     4621 tatttctacc cagccaagga gtctattgat atgtaccatc atttcaagga ggacatcgcc
     4681 ctctttggtg aaatgggctt taaaacctat cgtctttcaa tcgcctggtc ccgtattttc
     4741 cctaagggag atgagctaga gccgaacgaa aaaggcctgc aattctacga ggacttgttc
     4801 aaggaatgcc acaagtatgg tattgagccc ttggtgacca ttaccccctt tgattgcccg
     4861 atgcacttga ttgagaccta cggtggctgg cgaaatcgca agatgcttga attttacgaa
     4921 cgcctttgtc gtacactttt cacacgttac aaaggcttgg tcaaatactg gctgaccttc
     4981 aacgaaatca acatgattct ccacgcacca tttatggggg ctggtatctg ttttgaagaa
     5041 ggtgaaaatg tggagcaggt caaataccag gcagcccacc acgagcttgt tgcctcagcc
     5101 attgccacaa aattggccca tgaaatcgat ccggaaaaca aggtcggttg tatgttggct
     5161 gcaggtcaat actacccaca cacctgccac ccacgtgatg tatgggaagc tctgcaagaa
     5221 gaccgtgaaa actatttctt catcgatgtt caggcacgtg gctactatcc aaactatgcc
     5281 aagaagaaat gggaacgtga aggtatcgag attgaaatga ccgaccaaga cctagcactc
     5341 ctgaaagagc atacggtgga ctttatttcc ttctcttact actctagccg tgtggcttct
     5401 ggagatccag cagagaaaga aaaaacagca ggcaatatct ttgcctctat aaaaaaccct
     5461 tacctagacg catcagaatg gggctggcag attgacccac tcggtttccg cattaccctc
     5521 aacaccattt gggatcgcta tcaaaaacca ctctttgtgg ttgaaaatgg tctaggtgct
     5581 gttgatatac cagatgaaaa tggctatgtg gaagacgact accgtatcga ctacctccgc
     5641 caacatgtcc tagctatgcg tgatgccatt gtcgaagacg gtgttgaact tttgggctat
     5701 actacttggg gctgtattga cctagtttct gctggaacgg gcgaaatgaa aaaacgctac
     5761 ggcttcatct atgttgaccg tgacaatgag ggaaatggca cactcaaacg ctctaagaaa
     5821 aaatcatttg aatggtataa aaaagtcatc gctacaaacg gagcggatgt gggataaaac
     5881 acgagagaca ggtcttcgga cttgtctttt gttatcgttt ccactataat aaaaattagt
     5941 taaccataaa ggagttttgc atgaaataca tcgtaaacaa cagcaatgac ccagcttata
     6001 acattgccct cgaagcctac gctttcaagg aattaacaga tattgacgaa atttttattc
     6061 tctggattaa tgagcctgcc atcattatcg gtaagcacca gaatgctatt gaagaaatca
     6121 acaaggaatt cacagatgaa aagggcatcc atgttgttcg ccgtctgtca ggtggtggcg
     6181 cagtttatca cgacctaaat aacctcaact atactattat ttcaaacaag gcagacgagg
     6241 gagcttttga cttcaaaact ttctccaagc ctgtcattga tacccttgcc acactgggtg
     6301 tagaggccaa tttcaccggc cgtaatgacc tggaaatcga cggaaagaaa atctgtggta
     6361 acgcccaagc ctatgccaaa ggtcgcatga tgcaccacgg ttgcctgctc tttgatgtgg
     6421 atatgtcagt cctcgcaaat gccctcaagg tcagcaagga caagattgaa tccaagggtg
     6481 tcaagtcagt ccgtgctcgc gtgaccaata tcaataacga attgccagaa aagatgaccg
     6541 ttctggagtt caaggatgcc attctcaacc agatgaagca agaataccca gacatggacg
     6601 agtatgtctt gtcagaagat gacttggctc gtatccaaga aatccgtgat acccagtttg
     6661 cgacttggga ttggacctac ggtcaaacac cagaatacac tgtggagcgc agcgtgcgtt
     6721 acccagctgg taaaatcaca acctacatca aggctgaaaa atcagtcatc gaatctatca
     6781 agatttacgg agacttcttc ggtatcggtg atgtatcgga tattgaagac ttgctggtcg
     6841 gcactcgcta cgagtacgca gatgtacttg cgaaactcca agaaatcgat acaacacact
     6901 acttctcacg catgacaaca gaagaagtag caaaagcgat tgtagcttaa tccatagggc
     6961 tgccctttgt ttgggcagtc tttatttttt gtgaaaatgt tttcggcaaa ctgttttcac
     7021 ttgcacattt tctatattat ggtataatta ttttctgtga gtatccctca cttactcgtg
     7081 gctagaccat gagtcattag accaaaagga ggaacatatc aatggctaaa tacgaaattc
     7141 tttatattat tcgtccaaac attgaagaag aagctaaaaa cgctttggta gcacgctttg
     7201 actctatctt gactgacaac ggtgcaacta tcgttgaatc aaaagcatgg gaaaaacgtc
     7261 gccttgcata cgaaatcaaa gatttccgcg aaggtttgta ccacattgtt aacgttgaag
     7321 ctaacaacga tgaagctctt aaagagtttg accgtttgtc aaaaatcaac ggcgacattc
     7381 ttcgtcacat gattgtcaaa cttgacgcgt aagaaggtgt tgtatgatta ataatgtagt
     7441 attggttggt cgtatgaccc gtgatgcaga acttcgttat actccgtcta atcaagctgt
     7501 tgcgactttt actttggcgg ttaaccgcaa ttttaaaaat caaaacggtg agcgtgaagc
     7561 ggactttatc aacgtagtca tttggcgtca acaagctgag aatttggcga attgggctaa
     7621 gaaaggtgct ctgattggtg ttacaggtcg tatccagaca cgtagctatg ataatcagca
     7681 agggcaacgt gtctacgtta ctgaggtagt tgcagaaagt ttccaactct tggaaagccg
     7741 tactgcccgt gaaggtcaag gtggaggcta ttcagctggc aactcgtttg ctggaggaaa
     7801 tgactataac tcgccttatc aagcgcctgc acaatctaca ccaaacttcg ctcgagaaga
     7861 gagtccattt ggagcaagta atccaatgga tatatcagac gatgacctac cattctaggt
     7921 caaaaattaa taatataaag gagaacacac atggctcaac aacgtcgtgg cggtttcaaa
     7981 cgccgtaaaa aagttgacta tatcgcagct aacaaaattg aatatgttga ttacaaagat
     8041 actgagcttc ttagccgttt catttctgaa cgtggaaaaa ttcttccacg ccgtgtaact
     8101 ggaacttcag ctaaaaacca acgtaaagta acaacagcta tcaaacgtgc tcgcgttatg
     8161 gctcttttac cattcgtaaa cgaagattaa aaaaatggtc cagtggacca ttttttcatg
     8221 agctcgaaat taagaaagcg aattaagtcc ttgaatggac tgttttaacc ctagccaaga
     8281 agttagaaag cgaggcacag tctggggata gactgtttca gcagattaca tagacaagtg
     8341 acagcggata aagttctcgg gcgatttgat agctgaactg tatagataaa caaaagcgac
     8401 tggaattcca atcgctttgt tttattattg aactggggac atggcattgc gaatgttata
     8461 tttctttttc aggaggtagc gtgcaccgaa agcagcagct ccgataagaa tagtaacaag
     8521 cggagggaga acagggttaa atgcggccgg aatcagtgct gccagaatga aaacgactga
     8581 ccaagccagc gtagcaagtc cgagaaaagc gatagctttc agcaatttag gacgttgccc
     8641 agttttaatt tgttctctgt aaacgaaatg gtacatcaag tacatccctg caccaacacc
     8701 gaaaccgatg acaaataagg ttaatagccc atactgtgca ccttgaccaa aaagattcat
     8761 caaaccattg ataccagcaa taattgcaag catgaaaaga ctagaatcta gccacatcaa
     8821 ccatggattt tcattgtatt ccacttggtc tttcttttcc tgttcagaaa ttgtcttact
     8881 agcagcccac tcacttggtg ctccatagag attgcgggca gtcacaccag ttttttgctt
     8941 ttcaatgata gttggtaaaa tttcttccaa gagttctttg atttcgctat cagactttcc
     9001 atctttaatc agttggttgg tcgcaatatg gataaattct tggttctttt ttgttaatcc
     9061 gttgatttct gtaaatgaca tgttaatctc cttagtttaa aaccatctct tacggatgaa
     9121 gtagaaggtg agtgataggc tgattgcaaa tgcgaagagg ataatccacc aaaaagcata
     9181 gggaatatcg ttaaaaggaa tgatgttgtc cttaaagttc ataccgtatg cagagaagac
     9241 catggttggg atagagagaa cgattgtcac taatgccaag gttttcatga tggtattctg
     9301 gttgttagaa atgatagaag caaaggcatg ggtcatagag ttcaggatgg aaccatagat
     9361 gtctgccatc tcaatggcct gttgggtttc gaccaaggta tcttcaagca aatcctcatc
     9421 ctcttcatac ttacggagta gacgtgagga actagcaagt tttttgacca aacgctcatt
     9481 ggttttgagg gaagccttga agtagacgat ggttttttct aattccatga gtacaattaa
     9541 ttcttcattt cgagtggctt catggagttg cttctcaatc tcttcgctct ttctgtcaat
     9601 ggtccgtagg gctgacaagt agagttgagc atttcggtag agaatttgga aaacgaaacg
     9661 agacttcatg aaagtgaaga aattccgtag acgacgatgg ataaactgct caaacagtgg
     9721 caatggttcc aaacaagtcg tgataatcgc atcatctgtt agaataattc ccaaaggaat
     9781 agtaatataa tatgtcttgt tgtttcgttc ttcaagaatt gggacgtcga ccaggatgag
     9841 cgtatagtca tcttcgacag tgatacgaga ggattcttcc gcatcgagcg gtgctcgcag
     9901 gtcagcgatg tcaattttat agtgctcagc cacttccata gactcgctct gggaggggtt
     9961 gaccaaatta atccaagccc ctggttcaaa ggtttggatt tcttctaaat cagtcatggt
    10021 tgatagaaaa atttgtttca tatctttgcc ctccttttat ctttgttgcg ttaacgcaac
    10081 ctctattata ccaaaaaatg tgcagtttcg gaaaggtttt atatagaaat gtgatataat
    10141 atgtagacat ttaagcgaat aagttgtacg gacttttcct tgttccgtat accatagctt
    10201 atagcctctt aagaaaggaa atgaatgcgt gctaaaaaaa ctagcaaaaa agatacgcag
    10261 ccgtttcagc ttcagctgat tacggatgtg gatgctgtaa agtgcaaatc ttctcgtgtg
    10321 tttggcacac ttcgcagatt tcctattttt gtacggtttt cttaacgtga gattttcaaa
    10381 acgatatttt ttgaaaatcg agctaataca agatatagaa attgcccata ggcagtttcg
    10441 tctggtgacg cggagttaat cgaccgtcac cagttatctt gtgaacgcac atatatctag
    10501 aaaggaattg aacacgccct aaacgctgtg tgaaaaattg ctggtttctt catgtttaag
    10561 cgtgtggaac tggcttctgc gtcgtagaca tctgtgcttt cttcggtttt cgacctgtga
    10621 aagcactagt tgtcttgacg ggggtgcgtc ttcgaaatca cagatttcgg acttaccgcc
    10681 tattttcacc gtgcgtttta cgggctctgt atcttagaaa ggattcgaat gcgtgctaaa
    10741 aacctagcaa aaaagataaa tcttctcgtg tgtttggcac actttgcaga tttcctattt
    10801 ttgtacggtt ttcttaacgc acttatatca tgttatgcaa gaaaatattg tgattcatgg
    10861 ggcgcgtgcc cataatttga aaaatattga tgtgaccatt ccgcgtgaga agttggtggt
    10921 ggtgactggt ttgtcaggct ctggtaagtc gagtttggct tttgatacct tgtatgccga
    10981 aggccaacgc cgctacgtag agtccttgtc tgcctatgct cgtcagttct tgggcaacat
    11041 ggacaagcca gatgtggatt ccatagaggg tctcagccct gctatttcca ttgaccaaaa
    11101 aacaacctcg cgtaatccgc gttcgacagt cggtacagcg acggaaatca atgactatct
    11161 ccgcctgctc tatgctcgag ttggggtgcc ttactgtatc aacgggcacg gggcgattgc
    11221 ggcttcttcg gtggagcaga tcgtcgatga ggtcttggaa ttgccagaac gccagcgttt
    11281 gcagattcta gctccgattg tccgcaagaa aaagggtcag cataagacta tttttgagaa
    11341 aatccagaag gatggctatg ttcgggttcg tgtcaatggt gatgtctatg atgtgtcgga
    11401 agtgcccgag ttgtccaaga gcaaggctca taatattgaa gtcgttgtcg atcgaattgt
    11461 gataaaagaa ggtattcgct ctcggctttt cgattctatc gaagcggccc tgcggattgc
    11521 ggacggctat gtcatcatcg acaccatgga tgagaaggaa ctgctcttct ctgagtacta
    11581 tgcctgccca gtttgtggct ttacggtacc agagttggag cctcgtcttt tctctttcaa
    11641 tgctcctttt gggtcttgta gcgattgtga cggtttgggc atgaagctgg aagtggatac
    11701 ggatttgatt gtcccagatg ccagcaagac cttgcgtgag ggtgctttgg ctccgtggaa
    11761 tccaatctca tccaactact atcctcagat gttggaacag gctatgaacc attttggtgt
    11821 ggatatggac aagccttttg aggaattgac ggatgaggag aagaacctga ttttcaacgg
    11881 ctcggacggc aaagaattcc atttccatta tgaaaatgag ttcggtgggg tgcgtgatat
    11941 tgatattcca tttgaaggat tgattaccaa cattaaccgt cgctaccgtg aaaccaacag
    12001 tgactatacg cggacggtta tgaagactta catgaatgag ctgacctgtg gaacttgcca
    12061 cggctatcgc ctcaatgacc aagccctgtc tgtcaaagtt ggtggcgagc agggacttca
    12121 tatcgggcag ttgtctgatt tgtccgtagc ggatcatctg gaagtcattg aaaatctgac
    12181 cttgtctgaa aatgaagcca ccattgcaac accgattgtc aaggaaatca aggatcgcct
    12241 gaccttcctc aacaacgttg gtcttaacta cctgacgctg tcccgagcag ctggaaccct
    12301 atcaggtggt gagagtcagc ggattcgttt ggcgactcag attggctcaa acctgtctgg
    12361 tgtcctttac atcttggatg agccgtcaat tggtctgcac cagcgggaca atgaccgcct
    12421 cattgccagc ctgaaaaaga tgcgtgattt gggcaatacc ttgattgtgg tggagcatga
    12481 tgaggacacc atgcgggagg cggactggtt gattgacatc ggtccaggtg cgggtgtctt
    12541 tggcggagaa atcgtggctt ctggaacgcc tgcccaagta gctaaaaata aaaaatccat
    12601 tacaggccag tacctgtctg gtaaacgtga aattccagtt cctctagaac gtcgtgttgg
    12661 caatggtcgt ttcctggagg taacaggtgc caaggaaaat aacctgcaag atgtgactgt
    12721 tcgtttcccg ctcggaaaat ttgtagcggt gacaggggtg tctggctcag gtaagtcaac
    12781 tctggtcaat tccattctga aaaaagctat tgctcagaaa ctcaatcgca attcggacaa
    12841 gccaggtaag ttcaagtcta tttcaggaat tgaacacttg gaccgcctga ttgatattga
    12901 ccaaagcccg attggacgaa caccgcgttc caatccagct acctacacag gtgtctttga
    12961 cgatattcgg gatttgtttg cccagaccaa tgaagccaaa atccgtggct acaagaaagg
    13021 acgtttctcc tttaacgtca aaggtggtcg ttgtgaggct tgttctggtg atggtatcat
    13081 caagattgaa atgcacttcc tgccagatgt ctttgtgcca tgtgaggtct gtcatggaca
    13141 ccgttacaat tctgaaacct tggaagtaca ttacaaggag aaaaatatcg cccaagtcct
    13201 tgatatgacg gtcaatgatg cggtcgagtt cttcaagcat attccaaaaa ttgagcggaa
    13261 acttcgtact attcaagatg taggtttggg ctacgttact ctaggtcagc cagcaacgac
    13321 cctatcaggt ggggaagccc agcgtatgaa gttggcttct gaactccaca agcggtcaac
    13381 tggtaaatcc ttgtatatct tggatgagcc gacgacaggt ctgcatacgg aggacattgc
    13441 ccagttgctc aaggtcttgg cccgctttgt tgatgatggc aataccgtgc tggtcatcga
    13501 gcacaatctg gatgtcatca agacagccga ccacattatc gacatggggc cagaaggtgg
    13561 tgttggtggt ggtaccgttg ttgcgacagg aacaccagaa gaagtagcag agaacccagc
    13621 cagctttaca ggtcaatatt tgaaaatgaa gttgaaataa aaagtcgcct ctgcggcttt
    13681 ttttctctat ctgctaggaa gaattggtat ttgtctgtat ttctgctata atagttaaaa
    13741 aatcattgga ggaataggat gcaaaaaaga cttgaaaaat ttgaagcaaa attagctcaa
    13801 tcaactgttg atggaatctt ggtgactggg cagaataata tttattatct aacaggtttc
    13861 tgggggacag aggcgactgt cttcatcagt ggcaagcgtc gtttgtttgt gactgattcg
    13921 cgttatactt tgatagccaa ggcatcagta aaaggttttg atattatcga gagccgtttt
    13981 gcccttgaag agattgcaaa ggtgattaag gaagatgggc ttgaaaaaat tggttttgat
    14041 agcgaggtga cctatggttt ctatcaaagt ctgaccagta tttttgaggg ctatcaactg
    14101 gttgctatgt caaactttat cgaagacttg cgcatgatta aggatgagaa agaaattgcg
    14161 accattcgcc gtgcttgtca gatttcagac caggctttta ttgatgttct tgactttatc
    14221 aaaccaggtc agacgactga gatggacatc aatcatttcc ttgaccaccg catgcgtcaa
    14281 ctcggtgcag aaggggcatc atttgagttc atcgtggcat ctggataccg ctctgctatg
    14341 ccacatggaa gagcgtctga aaaggttatc caagctggag agaccttgac gctggatttt
    14401 ggttgctatt accaacatta tgtcagcgat atgacgcgta ccatccatat cggtcatgtg
    14461 acagaccaag agcgtgagat ttacgatgtg gttttgcgtg ccaacaaggc tttgattgag
    14521 caggcaaagg aaggcgtcac ctaccgcgag tttgacgcta ttcctcgtga aatcatcaat
    14581 gaagcaggtt atggtgccaa tttcactcat ggaattgggc acgggattgg tttggacatt
    14641 cacgaatatc cgtactttgg aaaatctgac gagccaatca aggctggtat ggtcttgacg
    14701 gatgagcctg gtatttattt ggatgataag tatggtgtcc gtatcgaaga tgacctcttg
    14761 attacggaaa caggctgtga agtcttgaca ttggctccaa aagaattgat tgtcatttga
    14821 gaaatttgac agtttatggt aaaataaaac gaataaataa aattttgaag aggtattcaa
    14881 tacaatgatt gaagcaagta aacttagagc aggcatgacc ttcgaaacgg aaggtaaatt
    14941 gattaaggtc ttggaagcga gccaccacaa gccaggtaag ggcaacacca tcatgcgtat
    15001 gaaattgcgt gatgtgcgta caggttcaac cttcgataca acttaccgtc cagatgaaaa
    15061 atttgaacaa gctattatcg aaacagttcc agcacaatac ctatatcaaa tggacgacac
    15121 agctttcttc atgaacactg aaacctatga ccagtatgaa attccagtag caactatcaa
    15181 ggaagaattg ctttacatct tggaaaactc agatgtgaaa atccagttct acggaacaga
    15241 agtaatcggt gtgactgtac caacaactgt tgaattggtc gtagcagaaa cacagccatc
    15301 tatcaaaggt gcgactgtta caggttcagg taagcctgca actatggaaa ctggtttggt
    15361 ggttaacgta ccagacttta tcgaagcagg tcaaaaactg gttatcaaca cagcagaggg
    15421 aacttacgta tcacgtgctt aagggtttcc tcctagaaag gagagcttat gacaacagaa
    15481 taccaaggtg aaatcgtcat tgcaccacgc gttcttgaag tgattacagg tattgcagca
    15541 gccaaagtgg aaggggtaca ttctcttcac aacaagcgtg tggcagatac ttggtcaaaa
    15601 tcttccttaa ataaaggtgt ataccttcaa actgacgacg aaggaaaagt aacagcagac
    15661 atttatgttt acctagagta cggtgtcaat gttccagctg tatctatgga tattcaacgt
    15721 gcagttaaaa cagctattta taactacgca gaagttgaag tgactgctgt caatattcat
    15781 gtcaatggca ttgttccaga taaaacacca aaaccagcct tgaaagattt attcggagag
    15841 gatttccttg atgaagaata atagacacgc cctgcgtaag tgtgctttgc aggcaatcgt
    15901 atcacttgaa tttggacaag aacctgttca ggcagctcag ttttcttatc tgtatgacag
    15961 agaggatgaa caagaaggag ttgaaattcc gcttttcctc ctcaatcttg ttaatggtgt
    16021 ggcagattat cgtgaggact tggataagga gttatctagc cgattaaaag caggatggac
    16081 cttagaccgt ttaaccttga ttgacaagaa tatcatgcga ctaggactat ttgaaatctt
    16141 acatttcgaa gaaacgccag accgtgttgc tgttaacgag gctattgaat tggctaaaga
    16201 attttctgat gaatcttcag ctaagtttat caatggagtt ttgagccagt ttattaaaga
    16261 agaagcctga tgagcttctt ttttacttga gaaacaagag aatgtatcac aaaaaaagct
    16321 gtacctaatt tttattaggt gcagcttttt tatatactag ctcctgctag taggctaatc
    16381 ggtaggatat agtctgtttt tgtcagtttt tttccttcga ttttatcaac taatagttca
    16441 accagcaggc gagctatttc ggttaatggt tgcttgatgg ttgtcagttg agggtagtag
    16501 ttttcgatga aactggttcc atcataacca atcaatttaa tatcttctgg aatagacagt
    16561 ttcattgaac gaatgacgtt ccataccagc atagccgttg catcgccaga tacaaagata
    16621 ccatctggtt tttgcttttc aagaatggct cggatttcca tctccttgcg cacaggtgag
    16681 aaatcactgg agatatgaaa aacttcggct ttgttcaaaa tagatgtgaa acctacttgg
    16741 cgaaggccgg taggtgaatt ggaatcatcg ttccccgtaa tcattaatgg attgtgacat
    16801 cccgcttttt gtagggtttg ggcagctaat accccgccag caaaattatc ggaagagaca
    16861 atggggatgg aaggagagag gttgcggtca aaagcgataa ttggagctac gacacggtcg
    16921 tagtcttgga taccgagatt gtgactgccc gagataatcc catctacttg gttagctgct
    16981 aacatttcta gatactcacg ttccttatcg gactcgtgct ggctattgca aataatggtt
    17041 ttatagcctc gatcaaaaag ctctttttct aaatggctaa tcaattcaga ataaaaaata
    17101 ttgtttattg ttgggaagat gagaccaact aattttgcag atttaccttg caaactacga
    17161 gctaaattat taggtttgta gcccagttca cgcatagcct cttcgacatt gcgaatggtt
    17221 ttttcagata ggtatccttt tttattgata acgcgcgaga cagttgttgg gctgacccca
    17281 gctaactgtg cgacatcagt tagttttgcg accataatct aaatggtagt aggttccggt
    17341 cggattacca gtcgtaatga ctataccaga ctgatccgca tcagggaaga cacgaccaga
    17401 aaatactttc tctcctttat tgataaagat ttcaaagaca gatttgtcga tgaagatatt
    17461 ggctgtaaga gctcctggag aaatctcgca agagcgactt gtgccgaaat cgagtgcgaa
    17521 tggctgacca cagttgccgc ggtccaatgt aatctggcct tgttcagtgt ctacagacaa
    17581 gaccaagcct ttttctgctt catttgcgaa caatacgatt tcgtgcttcg tgcccgctga
    17641 aaaatcaagt tccaattcgt aaacattatt ggtttctttt tgggctgaaa atggctgagc
    17701 ttctttacga agactggtaa tcgcatcgac tggatattgg tagagcttgc cgtccttgat
    17761 ggttaattct ttaaccaatg acagacagcc ttggtagtca taagcatcgg ttgggtattc
    17821 cacatctgga agtgccaacc agctaacaga tagagttcga ccgtctggtg cattaaaggc
    17881 ctgggttgca tagcactcaa aaccatagtc cagattgatc aattcgatcg gttcgacaat
    17941 gcttgctgtt tcaggatcga aactctgacc aatcttgtac atatttggat agatattgcc
    18001 atagtccaat acctctttgt ccaagccttg tggacagtag agaaggatgg gttgctcacc
    18061 gacgaacgca atatttgggc attccatcat ataagcggtc atatcattgg caaaatctag
    18121 gtcaccaaca taggaccagt tgaggtagtc gttattttca gctttataaa gtttgacaat
    18181 ccccttttta tccaaatttt gtccaccgac gatagcgtaa tattgccctt tatagttgaa
    18241 aatttgtgga tcacggaaat ggtcggtggt atcttctggt tgctcaatca agactttatc
    18301 aatcttttca atcttaccat ctttatccat taaggcaccg atttggtatg gatggcgaac
    18361 ccaattttca tcgcggacat ttccagtgta gaagaggaag agcttgtcgc caaattccat
    18421 ggcagatcca gagtaggcac cgtggctatc aagtggtgta tctgggtaca taaccgtacc
    18481 agtttcttca aaatggacca aatccgttga ttctgtatgg acccaagatt tcaatccgtg
    18541 cgcagcaccg aatgggaagt attggtaaaa aagagtccat tttccattaa aataagaaaa
    18601 tccatttgga tcatttaaca gtccgtgtgg tgtttcaata tggaaatttg tcctccaagg
    18661 agaactctct gtattcttct ttattttttc aatatattcg ggtgtccagt cagcataagc
    18721 cctgtaacgc tcctctgttg taaatgccat aattttctcc aatttttcta gtttttcatt
    18781 aatatagtaa acgttttctt gcaaaaaatc aagttttaac aatgtttttg gataaaattg
    18841 aaacaaaatg tgataaacgt ttgacatatt ttataaaagt gatataataa aaccatcgaa
    18901 agtttgaaaa cactttcaaa aaataaaaaa tatacaaaaa ggagattttt gtaaatggat
    18961 tataaaaaag tttctgccga agtgatcgaa gcggttggga aagataatct agttgcggca
    19021 gcacactgtg ctactcgtct tcgtttggtt ctgaaggatg aatccaaagt gaaccaaaaa
    19081 gccctcgatg ataatgcaga tgtcaaaggg acattcagta cgaatggtca gtatcaagtt
    19141 atcatcggac ctggtgatgt aaactttgta tatgcagagc tcatcaaggc tacaggctta
    19201 aaagaagttt caacagatga tttgaaacag attgcagcgc aagataagaa gttcaatcca
    19261 ttgatggact tgatcaagct cttgtcagat atctttgtgc caatcattcc ggctctcgtt
    19321 gctggtggtc tattgatggc gcttcgtaac ttcttgactt ccccagattt atttggtcca
    19381 aaatcaattg aggaaatgta tcctgctatc caaggcattt ctgcgatgat tcaattgatg
    19441 tcagcagctc cattcatgtt cttgccagtc cttgtaggta tctccgctgc gaaacgcttt
    19501 ggtgcaaacc aattcctcgg tgcggctatt ggtatgatca tgaccactcc agatttgggt
    19561 ggtaaagaag ctttttggga tatttttggt ttccaagtag ctcaaacaaa ctatgcatat
    19621 caggttattc cggttcttgc agcagtatgg cttcttgcga cgcttgaaaa attcttccac
    19681 aagaagttgc catcagcagt tgactttaca ttcacaccat tattgtcagt aatgattaca
    19741 ggtttcttga catttacagt catcggtcct gtgatgttga ccgtatctga tgcgattact
    19801 aacgcaattg tttggttgta cgatacaact ggtgcgttgg gtatgagtat ctttggtggt
    19861 acttactcat tgatcgtaat gactggtctt caccaatcat tcccagccat cgagacacaa
    19921 cttttgtctg cttacaacaa taatggtaca ggatacggag actacatctt tgtagttgct
    19981 tcaatggcta acgttgcaca aggtgctgca actcttgcta tctatttctt gacaaaaaat
    20041 gcaaaaacaa aaggtttgtc cggttcagca gcagtttctg ccttccttgg aattacagaa
    20101 ccggccctct tcggggttaa cttgaagtac agattcccat tcttctgtgc tcttgcaggt
    20161 tcggctatcg gtgccctctt tgcaggtttg actcatgtta tcgctgtatc tcttggggca
    20221 gcaggtttca ttggattcct ctcaatcaaa gcatcttcta tcccaatgta tgtagttgct
    20281 gaggtgattg cttttgctgc tgcctttgcc tttacttacg tttatggcaa gacaaaagca
    20341 tcagcagttt tcgctgatga agcagcaaca gcgtctgtag ttgaaacttc agaagaagtt
    20401 gaagaaactg cagaaatctt tactgcacaa gaaactcttg tatctccact ttcaggtgac
    20461 gttgttgccc ttgaaaatgt taatgaccca gtcttctcat caggagctat gggtaaaggt
    20521 ttggctgtta aaccgtctga gggtgttgtt tacgctccag cagatgcaga agtaacaatt
    20581 gcttttgaaa caggccatgc ttacggattg aaaacagcgt ctggtgctga acttttaatt
    20641 cacatcggta ttgatactgt atcaatgaac ggtaatggat ttgaaaaatt ggtggcagca
    20701 ggtgataaag taaaagctgg tactccgatt gctaaatttg atgcaactaa gattgcagaa
    20761 gcaggtcttg atgatacaac catgatcatc gtgaccaaca cagctgactt tgcagaagta
    20821 tctccacttg cagagggaac aatcgctcac ggtgtagaat tcttgaaagt agctaagtaa
    20881 tcttatataa aatcgatttg tagagtctgc ctctactaca taattaacag gaaaaaggct
    20941 ttcagccttt ttcttctgtt tgcttatatg ttataataaa agtgataaaa attttggaga
    21001 aaatcaaatg acaaaattat atggtagttt agaagctggt ggtacaaagt ttgtttgtgc
    21061 agtaggcgat gagaactttc aagttgttga aaaaactcaa tttccaacga caactcctta
    21121 tgaaacgatt gagagaacag ttgaattctt caagcgctat gaagatcgtt tggcaggtat
    21181 tgcgataggt tctttcggtc caattgatat tgatcaaaac tcacagactt atggttacat
    21241 cacttcgaca ccaaaaccac actggtcaaa tattgattta cttggtctga ttgctaagga
    21301 atttaacatt ccattttatt tcacgacaga tgtgaattca tcagcatttg gtgaaaccct
    21361 ggttcgtaaa ggggtaaaga gcttggttta ctatacaatc ggtacaggta ttggtgcagg
    21421 tgctattcag aatggtgagt ttatcggtgg cttgggtcat accgaagcgg gtcatactta
    21481 cgttgcccta cacccttacg atgtaaaaca tgaatttaaa ggaatgtgtc cattccacaa
    21541 tgggtgtttg gaaggcttag ctgcaggtcc ttctcttgaa ggtcgtacag gtattcgtgg
    21601 tgaattgatc gagctcaatt cagacgtttg ggatgtgcag gcttactaca ttgctcaagc
    21661 agcagtacag gcaaccttgc tttatcgtcc gcaagtaatt gtatttggtg gaggagttat
    21721 ggctcaagag cacatgctta atcgtgtacg tgagaagttt gtcggtttga tgaacgatta
    21781 tctcccaaca ccagatgtca aagaatatat cgtaacgcca gctgttgctg aaaatggttc
    21841 tgcaactctt gggaactttg ctttggcaaa acaggtgtca agaaattcat aattgtttat
    21901 gtgaacagat tcatttgtac tttggcgata gatatattga agaagaatat tgggtgaagt
    21961 tgttttatta tcacaataac ttgacagtga ggtgagagtt tttatgtaac tctcacctct
    22021 ttttacctaa aaaactgtat tcataagaga tagccattcg ttaatcaagg cagttttggg
    22081 gagtaggaaa ggacccgacc agc
//
LOCUS       DASFQD010000027        21380 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.027, whole genome shotgun sequence.
ACCESSION   DASFQD010000027 DASFQD010000000
VERSION     DASFQD010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 21380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21380
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.027"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(73..1332)
                     /locus_tag="U1021_000781"
     CDS             complement(73..1332)
                     /locus_tag="U1021_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEM4711347.1"
                     /translation="MKKYQVIIQDILTGIEEHRFKRGEKLPSIRQLSEQYHCSKDTVQ
                     KAMLELKYQNKIYAVEKSGYYILEDRDFQDHTVELNPADFQELPYEDFRICLNESLIG
                     RENYLFNYYHQQEGLAELISSVQSLLMDYHVYTKKDQLVITAGSQQALYILTQMETWA
                     GKTEILIENPTYSRMIELIRHQGIPYQTIERDLDGIDLEELESIFQTGKIKFFYTIPR
                     LHNPLGSTYDIATKTAIVKLAKQYDVYIIEDDYLADFDSSHSLPLHYLDTDNRVIYIK
                     SFTPTLFPALRIGAISLPNQLRDSFIKHKSLIDYDTNLIMQKALSLYIDNGMFARNTQ
                     HLHHIYHAQWNKIKDCLEKYALNIPYRISKGSVTFQLSKGILSPSIQHMFEKCYYFSG
                     QKADFLQIFFEQDFADKLEQFVRYLNE"
     gene            1451..2185
                     /gene="yaaA"
                     /locus_tag="U1021_000782"
     CDS             1451..2185
                     /gene="yaaA"
                     /locus_tag="U1021_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HEM4711348.1"
                     /translation="MKIIIPNAKEVNTNLENASFYPLPDRSKPVLDAISQFDVKKLAA
                     FYKLNESKAELEADRWHRIRTGQAKTYPAWQLYDGLMYRYMDRRGIDSKEENYLRDHV
                     RVATALYGLIHPFEFISPHRLDFQGSLKIGNQSLKQYWRPYYDQEVGDDELIFSLASS
                     EFEQVFSPQIQKRLVKILFVEEKAGQLKVHSTISKKGRGRLLSWLAKNNIQKLSDIQG
                     FKVDGFEYCTEKSTENQLTFIRSVKL"
     gene            2315..3754
                     /locus_tag="U1021_000783"
     CDS             2315..3754
                     /locus_tag="U1021_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HEM4711349.1"
                     /translation="MKKRSRWRKSPKLKLVNFVLWGLYAVILCLFLVTMYRYNILDFR
                     YLNYIITILLIGIAVLTGLLMWRKKARIFTALLLIFSLVITSVGIYGMQEVVKFSTRL
                     NSNSTFSEYEMSILVPANSEITDVRQLTSILAPAEYDQDNITALLEDISKMESTQLVT
                     SPATSYLTAYQSMINGESQAMVFNGVFTNILENEDPDFSSKVKKIYSFKVTQTVETAT
                     KQVNGDSFNIYISGIDTYGPISSVSRSDVNIIMTINRATHKILLTTTPRDSYVAIADG
                     GQNQYDKLTHAGIYGVNASVHTLENLYGIDISNYIRLNFTSFLQLIDVVGGIDVENTQ
                     EFTSGEHTFPVGTVHLDAEQALIFVRERYSLANGDNDRGKNQEKVIAALIKKLSAPEN
                     LRNYQAILNSLEESIQTDLSIETIIDLVNTQLESDTQFTVESQALVGNGRTDLSSYAM
                     PGSQLYMMEINQDSLEQAKVSIQSVLDGN"
     gene            3771..4460
                     /locus_tag="U1021_000784"
     CDS             3771..4460
                     /locus_tag="U1021_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular biosynthesis protein CpsC"
                     /protein_id="HEM4711350.1"
                     /translation="MNNQEMNTIEIDILLLLKTIWRKKFFILLMGLLGAGLAFAYGSF
                     LVTPQYESTTRIYVVGRHAEAGAGLTNQDLQAGSYLVKDYKEIILSQDVLMQVATELN
                     LNGNLKEKVSVSIPVDTRIVSISVRDADPNEAARIANSLRTFASHKIIEVTKVSDVTT
                     LEEAVPAEDPSTPNTKRNILLGLLAGSILVTGLVLVMEILDDRVKRPQDIEEVMGLTL
                     LGVVPDSKKLK"
     gene            4470..5156
                     /locus_tag="U1021_000785"
     CDS             4470..5156
                     /locus_tag="U1021_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase"
                     /protein_id="HEM4711351.1"
                     /translation="MGTLEIARTKKEFVNKTEEYFNAIRTNIQLSGEDIKVVGITSVQ
                     SNEGKSTTAASLAIAYARSGYKTVLVDADIRNSVMSGFFKPITKITGLTDYLAGTTDL
                     SRGLCETNIPNLTVIESGKISPNPTALLQSKNFENLLATLRRYFDYVVVDCPPLGMVI
                     DAAIIAQKCDAMVLVAEAGHVKRSAVKKVKEQLEQTGTQFLGVILNKYDIATEKYGDY
                     GNYGNYGKKA"
     gene            5194..5925
                     /locus_tag="U1021_000786"
     CDS             5194..5925
                     /locus_tag="U1021_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000565352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine protein phosphatase"
                     /protein_id="HEM4711352.1"
                     /translation="MIDVHSHIIFGVDDGPKTIEESLSLIGEAYRQGVRYIVATSHRR
                     KGLFETPEKVIMTNFLQLKEAVAEVYPEIRLCYGAELYYSKDLLSKLEKKKVPTLNGS
                     RYILLEFSMNTPWKEIQEAVNEVTLLGLTPVLAHIERYDALAFHAGRVEELIDKGCYT
                     QVNSNHVLKPALIGDQAKEFKKRTRYFLEQDLVHCVASDMHNLSSRPPFMREAYKLIT
                     EEFSKDKAKALLKKNPLMLLKNQAI"
     gene            5954..7780
                     /locus_tag="U1021_000787"
     CDS             5954..7780
                     /locus_tag="U1021_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEM4711353.1"
                     /translation="MDLGTVTDKLLDRNSKRLILMCMDMCLIIVSMILSRLFLDVIID
                     IPDERFILAVLFVLIFYLIISVRLKVFSLITRYTGYQSYVKIGLSLISAYSLFLIISM
                     ILWQTFSYCFILVSLFLSYVMLITPRIVWKVLHETRKNVIRKKDSPLRILVVGAGDGG
                     NIFINTVEDRKLNFEIVGIVDCDPNKLGTFIRTAKVLGNRNDIPRLVEELAVDQVTIA
                     IPSLNGKEREKIVEICNTTGVTVNNMPSIEDIMAGNMSVSAFQEIDVVDLLGRPEVVL
                     DQDELNQFFKGKTILVTGAGGSIGSELCRQIAKFMPKRLMLLGHGENSIYLIHRELLE
                     KYQGKIELVPLIADIQDRELIFSIMADYQPDVVYHAAAHKHVPLMEYNPHEAVKNNIF
                     GTKNVAEAAKTAKVAKFVMVSTDKAVNPPNVMGATKRVAEMIVTGLNEPGQTQFAAVR
                     FGNVLGSRGSVVPLFKEQIRKGGPVTVTDFRMTRYFMTIPEASRLVIQAGHLAKGGEI
                     FVLDMGEPVQILELARKVILLSGHTEEEIGIVESGIRPGEKLYEELLSTEEHVSEQIY
                     EKIFVGRVTNKQSDIVNSFINGLLQKDRNELKDVLIEFAKQE"
     gene            7866..8582
                     /locus_tag="U1021_000788"
     CDS             7866..8582
                     /locus_tag="U1021_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEM4711354.1"
                     /translation="MLGHRLVREKENRIKGGLYHKIQIELAFNSNHIEGSQLTYDQTR
                     YIYETNTIGFEENSTIKVDDIIETTNHFTAFDFLLDSFQDDLNETWIKEIHAILKRGT
                     SDSRKSWFQVGDYKSYPNEVGGRETTLPEKVESDMQELLNSYHRLPEISFEDILDFHV
                     RFERIHPFQDGNGRVGRLIMFKECLKHGHVPFIIGDDMKYFYYRGLAEWGEQNGFLLD
                     TCLAAQDRFKQYLEYFRVED"
     gene            8608..9306
                     /locus_tag="U1021_000789"
     CDS             8608..9306
                     /locus_tag="U1021_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEM4711355.1"
                     /translation="MHSGRTITKEYLKANEITGQYFDKIETRKFELFLKYTTDKLLAL
                     ILLVLLSPVIIALSIWIKLDSKGPVFYRQERVTRYGRIFRIFKFRTMISDADKVGSLV
                     TVGQDNRITKVGHIIRKYRLDELPQLFNVLTGDMSFVGVRPEVQNYVDQYTDEMLATL
                     LLPAGITSPASIAYKDEDIVLEKYCSQGYSPDEAYVQKVLPEKMKYNLEYIRNFGIIS
                     DFKVMIDTVLKVIK"
     gene            9316..10545
                     /locus_tag="U1021_000790"
     CDS             9316..10545
                     /locus_tag="U1021_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006148974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEM4711356.1"
                     /translation="MTKRQNIPFSPPDITQAEIDEVIDTLKSGWITTGPKTKELERRL
                     SVFTGTNKTVCLNSATAGLELVLRVLGVGPGDEVVVPAMTYTASCSVITHVGATPVMV
                     DIQKNSFEMDYDALEKAITPKTKVIIPVDLAGIPCDYDKIYTIVENKRSLYVASDNKW
                     QKLFGRVIILSDSAHSLGASYKGKPAGSLADFTSFSFHAVKNFTTAEGGSVTWRSHPD
                     LDDEEMYKEFQIYSLHGQTKDALAKTQLGSWEYDIVIPGYKCNMTDIMAGIGLVQLER
                     YPSMLNRRREIIEKYNVGFEGTLIKPLVHLTEDKQSSMHLYITHLQGFTLEQRNEVIQ
                     KMAEAGIACNVHYKPLPLLTAYKNLGFEMKDFPNAYQYFENEITLPLHTNLSDEDVEY
                     IVHTIVNIISNFESGKH"
     gene            10542..11159
                     /locus_tag="U1021_000791"
     CDS             10542..11159
                     /locus_tag="U1021_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007893185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4711357.1"
                     /translation="MKEKYQILFNPSANEIEQVVAIHLATFEGFFLTFLGKGFLKNLY
                     TGFLEHPSSELMLITQDNNVVGFLAYSKNISAFYKWLLKNKFFQFLWYSFGATIRNPK
                     ASIRLLRALTYPQKSQSEDSYVELSSIGVNPDYTNHGLGSILITEFVKRQNFSEIKYI
                     RLATDAINNDKVNAFYKKNGFQLYSTYFTPEGRKMNEYRYYGDET"
     gene            11156..12262
                     /locus_tag="U1021_000792"
     CDS             11156..12262
                     /locus_tag="U1021_000792"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012744.1,HMM:NF024868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEM4711358.1"
                     /translation="MKKALIISTVSRQFYLFEQVNIKILKELGYEIHGAANFSDRSER
                     LKEVNIIEHHVEFSRNPLSIRNIFAFKKLLLIIRENKFDLIHAHSPVGGVYGRLAAKI
                     CNVPRIIYTAHGFHFFKGAPQQNWLIYYPVEKLMSYLTDVLIVINEEDYKLAKSKFKL
                     KQINFVSGIGVNYSKFKPISFEKKIEKRRQFGFTENDQILIYVGELNHGKNQGVLIEA
                     MSEIVKKNPKVSLLLVGQGKLFSEYQEKIHNYNLQNNVHLLGYRDDVVDLLQIADIAI
                     SSSLREGLPVNLLEAMGVALPLLVSDCRGNRDLVTDNGIVIHDNIAKEWEKTILDLFD
                     SPSKLREFGLNSLSHVKDFSEEQIRKKMLEIYTD"
     gene            12372..13421
                     /locus_tag="U1021_000793"
     CDS             12372..13421
                     /locus_tag="U1021_000793"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012744.1,HMM:NF024831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM4711359.1"
                     /translation="MSKIRVMHLLKSNRYSGAENVVCQIIESTRNQSNDYEMIYVSPK
                     GPIEGILEDKDINFFGLNNFTQKEIGRAIDLLNPDIIHAHDFSASVRVSKYNRKIISH
                     LHNNPTWFSKLDYRTLIYTFSIHRFKRIIGVSRSIQNEYIFKNKLNKKFLVLPNVVDK
                     TKVLNLANEESYSSDLLFVGRLSREKDPLFFLQIVKKLVESNPNIQAIMVGDGALLNE
                     CEEYIVSNSLFNNVKMVGFEQNPYKYMSKTKILIMTSVYEGFGLVAIEAMLLGKPVVC
                     RLVGGLVDILDNETGAFCTTIDEFVFTITQLLANSSDIKLRETKAVERAQRYCDISSF
                     QQTLDTLYKEILGLG"
     gene            13437..14741
                     /locus_tag="U1021_000794"
     CDS             13437..14741
                     /locus_tag="U1021_000794"
                     /inference="COORDINATES: protein motif:HMM:NF016800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEM4711360.1"
                     /translation="MKKNYGLEFIFLLFGSGMIFYQLFPPIVISLTSMAFFTFCFYSL
                     KARYSVIETLVLLTIIGIPTSMISILGISYSIFPLTWYTTFILCSIFLIILTGKLRKS
                     YFLSITFFAIIEFTLCLMANSFTDAMKQYLMIISFLFVFFIGEYLKVNVKNDCFYNDL
                     RFLYLIGVFCVANQVLFQKFYILITGSVIGHYIIIGQSRVAYGGIMGDFSFATLYLAS
                     GCLLILLLYLNDKRFKFWLFFISESFLLLSMLVVSSRTGIVSLVITVVLYFIFNFKKI
                     PKRMLVVLALGCIGVPILIDKILSSRGGQALLETSGRSENYLQSITFWLEKPLFGYGL
                     GLENLYHSTGLAVPHNFFIQYLLQMGLVGLFLIIIPFIIFITNDVLRNNYSKWLFLLV
                     VIGSMFIPDIVSSRFLYGIVLLCTIENRMFDYNNLEVLKSET"
     gene            14731..15192
                     /locus_tag="U1021_000795"
     CDS             14731..15192
                     /locus_tag="U1021_000795"
                     /inference="COORDINATES: protein motif:HMM:NF012360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine acetyltransferase"
                     /protein_id="HEM4711361.1"
                     /translation="MKRKAELVAIKARNYFLAKKYKRATFFSTVLRVVFSCDLPAEVQ
                     FHESIQLVHNGLGCVFHPKTVIAENCKIYQNVTIGGNGKIINGEIISGAPKLEKNVAV
                     FAGACVLGPITIGHDSIVGANAVVTKNVPPHSLVIGNPAQVKELNFEYNFE"
     gene            15185..16651
                     /locus_tag="U1021_000796"
     CDS             15185..16651
                     /locus_tag="U1021_000796"
                     /inference="COORDINATES: protein motif:HMM:NF024832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEM4711362.1"
                     /translation="MNKGNKMSSFHKQVGNALKWSSLAEIVAKLITPLSNTILARLLT
                     PEHFGVIATITMIISFADIFSDSGFQKYLVQHEFESEYELDKAANVAFSSNFLISIFL
                     WLFISLLNEQISSIVGNPGLGIVIIVAGFSLPITAFSSIQSALFKRKLEFRVLFYARI
                     LSSLVPLLITVPLAMLGKSYWSIIIGNIIGNIIISVVLSYLSDWKPNFSFNRFIFFEM
                     FSFSTWSLFESIGTWLSSYIGTFIVGSILSQYYLGLYKTSMTTVNGIFAIITSATVSV
                     LFSSLSRLQSDRTEYDFIYLDFINLVSIVIFPTGVGIYIYKNLVTSILLGKQWMEAAS
                     FVGIYGLMCCITLVLGQFASEYFRGLGKPKANVLMTFLHLIVLIPTLILSAEDGFLTL
                     AYASSLIKIQQILIYWLILWFGFKFNPLRIFNYVWKGLFSSLIMGIFGYIFIQINSGI
                     IYQFISIVACVIIYLMCYIYIFKGKLELIRIMKIFTGI"
     gene            16679..17788
                     /locus_tag="U1021_000797"
     CDS             16679..17788
                     /locus_tag="U1021_000797"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012744.1,HMM:NF024831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM4711363.1"
                     /translation="MIKVLHYTPGFHGGGIESRLLDWYRNMDREKVQFFLIKLNQIDN
                     TEDIKEFLSLGGKFFNLPPFNLTTGLRLEKMIYNIIVEEKIDIVHVHDTNSGLFALKA
                     AKRANVKCRILHSRTTNFLPNERNKIIKQAFMKIAPKFATDYFACSFNAGIWGCGKNN
                     ADEIVVIKNGIQDDRYQYNSAIRMSIRKELGIENKFVVGTVSRLSPQKNIPFLIKIFN
                     DYYKIDNNSILLIVGGGDEQSVIDEINNYPEIKNNVIIAGPKKNIWDYYMAMDIFCGT
                     SFYEGFGTTAIEAQASGLPTLLSQGFPAEIEVTNFVRRLDIVDTEEWIRNIKEFKNER
                     YSESGIKSIAAYGYSAKKVAKDLENFYLEHYNEFN"
     gene            17775..18758
                     /locus_tag="U1021_000798"
     CDS             17775..18758
                     /locus_tag="U1021_000798"
                     /inference="COORDINATES: protein motif:HMM:NF013884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEM4711364.1"
                     /translation="MNLIKYNYQNRISYIDLFKGCGILLMIMGHVGFGHTFEKYIHAF
                     HMPMFFFISGFLFKKKTMDFSNWIIKKFKSLILPYILWGVISLVVWYAFKGIDWKYFR
                     ILFWDNTSGIAISGALWFLMALFISDIIFFLVEYNVYNTFIKLIIYIFISSLGISLPL
                     MGLTLPFAICSACVGTSFMAIGYYIKSNEIILRNFFKLNTIYIFSSFLIGSILVTFNE
                     TVNMRTSNYGNIFLFYTSSLLIILALLYYSRKIDKYLKICPLLVIGSDSITFVCLNQI
                     CIYAIGFLCNRFGLKWDGLFFDFLFLIIVLFILWIVNELIMRSNFKCLIGK"
     gene            18812..19207
                     /locus_tag="U1021_000799"
                     /pseudo
     CDS             18812..19207
                     /locus_tag="U1021_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002354396.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein CapI"
     gene            19316..19717
                     /locus_tag="U1021_000800"
     CDS             19316..19717
                     /locus_tag="U1021_000800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711365.1"
                     /translation="MYSKYEITHVACDRKQDVKTVYNEYKANKQQFINKIANCVKDDV
                     LKTYFSRIIHDYDEKIYIDSVERVLKNRELVSQNKDKILKTLKFYDKRNLSDCEFLNE
                     SNVEVYLNSLHINNDRLAFYLKQLNGDYNDA"
     gene            19819..21309
                     /locus_tag="U1021_000801"
     CDS             19819..21309
                     /locus_tag="U1021_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HEM4711366.1"
                     /translation="MSNKEFSQEFLKTIIFSKRKELGYSQQELSDLTGINRAMISKLE
                     QGEYLPSIPQLLALSNVLEFEINSLFVSDFPKSIGTLPAKKIAVAGTGYVGLSIAVLL
                     AQHHQLTAVDIIQEKVDLINAKKSPIQDDYIEKYLAEKDLNLVATLDAETAYREAEIV
                     VIAAPTNYDSAKNYFDTSHVEEVIQTVLSVNPQALMVIKSTIPVGFTQSMREKFATDN
                     IIFSPEFLRESKALYDNLYPSRIIVSCEEGTPTSVVEGSRLFASLLQEGALKEDVDVL
                     YMGSTEAEAVKLFANTYLALRVSYFNELDTYAELKGLDTESIIKGVGLDPRIGDHYNN
                     PSFGYGGYCLPKDTKQLLANYNDVPQNMMSAIVESNRTRKDFIADQILKIAGYYDYSS
                     HDQYSQSGEKEVIIGVYRLTMKSNSDNFRQSSIQGVMKRLKAKGAKVIIFEPTLENGS
                     TFFGSKVINNLNQFKSKSHAIVANRYDSVLDDVLDKVYTRDIFRRD"
BASE COUNT         6889 a         3040 c         4266 g         7185 t
ORIGIN      
        1 tttccactat atagaataat ccccctcgtc tcttaagttc gagggggatt atttgtatga
       61 gactattgga tttcattcat tcaaatatct tacgaattgc tccagtttat ctgcaaaatc
      121 ttgttcaaag aagatctgta agaaatcagc tttctgtccg ctgaaataat aacacttttc
      181 aaacatgtgt tggatgctag gagaaagaat ccccttgctt agctgaaagg tcacgctccc
      241 tttggaaatt cgatacggga tgttcaaagc gtatttctct aaacaatctt ttattttatt
      301 ccactgagcg tgataaatat gatgaagatg ctgtgtgttc cgtgcaaaca taccgttatc
      361 aatgtagagc gagagagctt tttgcatgat aagattggta tcgtagtcga ttagactctt
      421 atgtttgatg aaggaatcac gtagctgatt aggaaggctg attgcaccga ttcggagggc
      481 aggaaagagt gtcggtgtaa aagattttat gtagatgaca cgattatctg tatcaagata
      541 gtgtaaaggt aggctatgac tagaatcgaa atctgctaaa tagtcatcct caatgatgta
      601 gacatcgtat tgctttgcta attttacgat ggctgttttt gttgctatat cataggttga
      661 accgagaggg ttgtgcaagc gaggaattgt gtagaaaaac ttgatttttc cagtttggaa
      721 gatactttcc aattcttcta ggtcaattcc atctaaatcc cgttcaattg tttgataagg
      781 gattccttga tgtcgaatga gctctatcat tcgtgaatag gtagggttct ctatcaagat
      841 ttccgttttt ccagcccagg tttccatttg tgtgagaata tatagagctt gttgactacc
      901 agctgtgata accagctggt ctttttttgt atagacatga tagtccatta acagactttg
      961 aacggaggaa atcaattctg ctaatccctc ttgctggtga tagtagttga ataggtaatt
     1021 ttcccgccca ataagacttt cgtttagaca aatccgaaaa tcttcatagg gtaattcttg
     1081 aaagtctgca ggattgagct ctacagtatg gtcttggaaa tctctatctt ctaagatata
     1141 ataaccgctt ttttcgacag cgtagatctt attttggtac tttaattcca acatagcctt
     1201 ttggacagtg tctttgctac aatgatattg ctcactgagt tgacggatag aaggtaattt
     1261 ctctccacgt ttgaatcggt gttcctctat tccagtcaaa atatcttgga taataacttg
     1321 atattttttc atctaggccc cctttttata gactatgtta ctagctagta tataggaaaa
     1381 attgaagaaa gacaatatct ggatggggtt gaggttcagg aattaagcta ctatatggta
     1441 taattaagtg atgaaaataa ttatacctaa tgcaaaagaa gtaaatacaa atttagagaa
     1501 tgcctcgttt tatcccctgc ctgatcgaag taagccggta ctggatgcca taagtcaatt
     1561 tgatgtaaaa aagctggctg ccttttataa attgaatgaa tcaaaggctg agttagaagc
     1621 tgatcgttgg catcgaatca ggacaggtca agcaaaaacc tatccagcct ggcagttata
     1681 tgatggtctc atgtatcgtt atatggatag gcgaggtata gattcgaaag aagaaaatta
     1741 cctacgtgac catgttcgtg tagcgacagc cttatacgga ttgattcatc cttttgagtt
     1801 catttcacct caccgcttag attttcaagg gagcttaaag ataggcaatc agtctttgaa
     1861 acagtactgg cgaccgtatt atgaccaaga agttggtgat gatgaactga ttttctcact
     1921 ggcttcgtca gaatttgagc aggtgttttc tccacagatt cagaaaagat tagttaaaat
     1981 tcttttcgtg gaagaaaaag caggtcagct aaaagttcac tcgactatat caaaaaaagg
     2041 tagaggaaga ttgctgtcct ggttggctaa gaacaatatt cagaaattat cggacattca
     2101 aggttttaag gtggatggct ttgaatattg tactgaaaaa tcaacagaga atcagctgac
     2161 tttcatacgt tcagttaaat tatgaaaaaa gaacaagata atgtttttca ggttttcagg
     2221 taacgttttt catcactaaa tatagctatg tcgctagtaa aagattgtta tttgtgatac
     2281 aataagtaag ttataagtaa aaggaaggtt gtttatgaag aagagaagca ggtggaggaa
     2341 atcgcctaag ctcaagttgg taaattttgt actttgggga ctctatgccg ttattttatg
     2401 tctgttctta gtgactatgt atcgctataa catcctagat ttccggtatt taaactatat
     2461 tataacaatc ctgttgatag ggattgcagt attgactggc ttgttgatgt ggcgtaagaa
     2521 agcacgcata tttacagcac ttttacttat tttttcactg gtcatcactt ctgtcggaat
     2581 ctatgggatg caagaagttg ttaagttttc gacacgacta aattcaaatt cgacattttc
     2641 agaatatgaa atgagcatcc ttgtcccagc aaatagtgag attacggacg ttcgtcagct
     2701 tactagtata cttgctccag ccgaatacga ccaagataac atcaccgctt tactggaaga
     2761 catctccaaa atggagtcta ctcaactagt gactagccct gcgacatctt acctgacagc
     2821 ctaccaatct atgataaatg gtgagagcca agcgatggtc ttcaacggag tttttaccaa
     2881 tattttagaa aatgaagatc cagacttttc ttcaaaagtg aaaaaaatat atagtttcaa
     2941 agtgactcag actgttgaaa cagctactaa gcaggtaaat ggagacagtt ttaatatcta
     3001 tattagtggt attgatacct acggtccaat ttcatctgtt tcgcgttccg atgtcaatat
     3061 cattatgact attaatcgtg ctacacataa gattttatta acaactactc cacgagattc
     3121 atacgttgct atcgcagatg gtgggcaaaa tcaatacgac aaattaactc atgctggtat
     3181 ttatggtgtc aatgcctctg tgcatacctt ggaaaatctt tatggtattg atattagcaa
     3241 ctatattcgt ctcaacttta catccttcct acagttgatt gatgtggttg gaggtatcga
     3301 tgtagaaaac acccaagagt tcacaagtgg tgagcatact ttcccggtgg gaacagtaca
     3361 cttagatgca gagcaagcgc taatctttgt tcgtgagcgg tattcgttgg ctaatggtga
     3421 taatgaccgt ggtaaaaacc aagaaaaagt catagcagct cttataaaga aattgagcgc
     3481 accagagaat ttacgcaatt atcaagctat tttaaatagt ttagaagaat ctattcaaac
     3541 ggatctaagt attgaaacaa ttatagactt ggtgaatacg caattagaat ccgacacaca
     3601 gtttacagtg gagtcacaag cgctagttgg aaatgggcga acagatttat cttcttatgc
     3661 gatgcctgga tcgcaacttt atatgatgga aattaaccaa gatagtctgg agcaagcaaa
     3721 ggtctcgatt cagtcagtat tggatggaaa ttaaaaaaat aggagaaaac atgaataatc
     3781 aagaaatgaa tacaatcgaa attgatattt tactcttact gaaaacgatt tggagaaaga
     3841 aattctttat ccttctgatg ggactattag gtgcagggtt agcttttgct tatggtagtt
     3901 ttttggtaac accgcaatat gaatcgacaa ctcgtatcta tgtagtcggg cgacatgctg
     3961 aagctggtgc gggattgaca aatcaggatt tacaagctgg gtcttatttg gtaaaagact
     4021 ataaagaaat cattctatca caagatgtac tgatgcaggt agctacagag ttgaatttga
     4081 atggaaacct aaaagaaaag gtttcagttt ctatccctgt cgatactcgt attgtttcta
     4141 tctccgtgcg tgatgcggat ccaaatgaag cggcgcgtat cgcaaatagt ctccgtactt
     4201 tcgcatcgca caaaatcatc gaagttacaa aagtgagcga tgttacaaca ctcgaggagg
     4261 ctgtcccagc agaggatcca tcaactccta ataccaaacg caatatcttg cttggtttat
     4321 tagctggcag tatcttggta acaggtcttg tgttggttat ggaaattttg gatgaccgtg
     4381 taaaacgtcc tcaggatatc gaagaggtaa tgggattgac cttacttggt gtagtgccag
     4441 attcgaagaa attgaaatag gagaaaaata tggggacatt agaaattgca cgtacgaaga
     4501 aagaattcgt aaataagaca gaagaatatt ttaacgctat ccgtacgaat attcaactca
     4561 gtggggaaga tattaaagtg gttggcataa cttctgtcca atcaaatgaa ggaaagagta
     4621 caactgcagc tagtcttgct attgcctatg ctcgttctgg ctacaagaca gttctggttg
     4681 atgccgatat tcgaaactca gtgatgtcag gtttctttaa gccaattacg aaaattactg
     4741 gtttaactga ttatttagca ggaactactg atttatctcg agggctatgt gaaacaaata
     4801 ttccgaattt aacagttatc gagtctggta aaatatcacc aaacccaact gcccttctac
     4861 aaagtaagaa ttttgagaac ttattagcta ctcttcgtcg gtattttgac tatgtggttg
     4921 tagattgtcc acctctaggg atggtaattg atgctgcaat tattgctcag aagtgtgatg
     4981 caatggtttt agtagcagag gcaggacatg ttaaacgttc agctgtgaaa aaagtaaagg
     5041 aacagttgga gcaaacagga acacagtttt taggcgttat cttgaacaag tatgatattg
     5101 caactgagaa atatggtgat tatggaaatt atggtaatta cggtaaaaaa gcttgatttt
     5161 tatgatatga gctttgatta agtaggtgtt agtatgattg atgttcattc gcatattata
     5221 tttggtgtgg atgatggtcc aaagacaatt gaagagagcc tgagtttgat aggcgaagct
     5281 tatcgtcaag gtgttcgcta tatcgtggcg acatctcata gacgaaaagg gctgtttgaa
     5341 acaccagaaa aagttatcat gactaatttt cttcaactta aagaagcagt agcagaagtt
     5401 tatcctgaaa tacgattgtg ctatggtgct gaattgtatt atagtaaaga tctcttaagc
     5461 aaacttgaaa aaaagaaagt accaacgctt aatggctcgc gctatattct tttggaattc
     5521 agtatgaata ctccctggaa agagattcaa gaagcagtga acgaagtgac gctacttggg
     5581 ctaactcccg tacttgccca tatagaacga tatgatgccc tagcgtttca tgcagggaga
     5641 gtagaagagt taattgacaa gggatgctat actcaggtaa atagtaacca tgtgctgaag
     5701 cccgctttaa ttggcgatca agcaaaagaa tttaaaaaac gtactcgata ttttttagag
     5761 caggatttag tacattgtgt tgctagcgat atgcataatt tatctagtag acctccgttt
     5821 atgagggagg cttataagtt aataacagag gaatttagca aagataaagc gaaagcgttg
     5881 ttgaaaaaga atcctcttat gctattaaaa aaccaggcaa tttaagctgg ttaatctaga
     5941 ttttggagaa aaaatggatt tgggaactgt tactgacaaa ctgttagatc gcaacagtaa
     6001 acgattgata ctcatgtgca tggatatgtg tcttattata gtttccatga ttttgagcag
     6061 gctgtttttg gatgttatta ttgacattcc agatgaacgc tttattcttg cagttttatt
     6121 tgttttaata ttctacctga ttatctcagt tagactaaag gttttttcgt taattacgag
     6181 gtatactgga tatcaaagtt atgtgaaaat aggactgagt ttgatatccg cttattcatt
     6241 atttttaatc atttcaatga ttctatggca gacctttagt tattgtttca tcttagtgtc
     6301 cttatttttg tcgtatgtaa tgctcattac tccgaggatt gtttggaaag tcttacatga
     6361 gacgagaaaa aatgtcattc gaaagaagga tagcccacta agaatcttag tagtaggtgc
     6421 tggagatggc gggaatatct tcatcaatac cgtcgaagat cgaaaattga attttgaaat
     6481 tgtcggtatt gttgattgtg atccaaataa acttggaaca tttatccgta ccgctaaagt
     6541 tttaggaaac cgtaatgata ttccacgatt ggtagaggaa ttagctgttg accaagtgac
     6601 gattgccatc ccttctttaa atggtaagga gcgagagaag attgttgaaa tctgtaatac
     6661 tacaggagtg accgtcaata atatgccgag cattgaagac attatggcgg ggaacatgtc
     6721 tgtcagtgcc tttcaggaaa ttgacgtagt agaccttctt ggtcgaccag aggttgtttt
     6781 ggatcaggat gaattgaatc agtttttcaa agggaaaaca atccttgtca caggagcagg
     6841 tggctctatc ggttcagagt tatgtcgtca aattgctaag tttatgccta aacgcttgat
     6901 gttgcttgga catggagaaa attcaatcta tctcattcat cgagagttac tggaaaagta
     6961 ccaaggtaag attgagttgg tccctctcat tgcagatatt caagatagag aattgatttt
     7021 tagcataatg gctgattatc aacccgatgt tgtttatcat gctgcagcac ataagcatgt
     7081 tcctttgatg gaatacaatc cacatgaagc agtgaagaat aatatttttg gaacgaagaa
     7141 tgtggctgag gcggctaaaa ctgcaaaggt tgccaaattt gttatggttt caacagataa
     7201 agctgttaat ccaccaaatg ttatgggagc gactaaacgt gttgcagaaa tgattgtaac
     7261 aggtttaaac gagccaggtc agactcaatt tgctgcagtc cgttttggga atgttctagg
     7321 tagtcgtgga agtgttgttc cactattcaa agagcaaatt agaaaaggtg gtcctgttac
     7381 tgtcaccgac tttaggatga ctcgttattt catgacgatt cctgaggcaa gtcgtttggt
     7441 tatccaagct ggacatttgg caaaaggtgg agaaatcttt gtcttggata tgggcgagcc
     7501 agtacaaatt ctggaattgg caagaaaagt tattctgctg agtggtcata ctgaggaaga
     7561 aatcgggatt gtagaatctg gaatcagacc aggcgagaaa ctctacgagg aattactatc
     7621 aacagaagaa catgtcagcg aacagattta tgaaaaaata tttgtgggtc gcgttacaaa
     7681 taagcaatcg gacattgtca attcatttat caatggatta ctccaaaaag atagaaatga
     7741 attaaaagat gtgttgattg aatttgcaaa acaagaataa agaaagtaaa agatattttt
     7801 actttcctag agtttaaacg atgtttaaat tctaggaagg ttgaaatact ttcctgaggt
     7861 aagatatgct aggtcatagg ttagtaagag aaaaagaaaa taggatcaaa ggtggtcttt
     7921 accataagat tcaaatcgag ctggctttca actcaaacca tatagagggg agtcaactga
     7981 cgtatgacca gacaaggtat atctatgaga ccaatacgat tggttttgaa gaaaattcaa
     8041 ccataaaggt ggatgatatt atcgaaacga ccaatcattt tacggctttt gattttctct
     8101 tagatagctt tcaagatgat ttgaatgaaa cttggataaa ggagattcat gctattttga
     8161 agagaggaac ctctgattct cggaagtcat ggtttcaagt cggagactat aagtcgtacc
     8221 caaatgaagt tggcggacgt gaaacgactt tgccagaaaa agtagaatcc gatatgcaag
     8281 aattgctgaa cagctatcac cgcttgcctg agatttcctt tgaggatatt cttgactttc
     8341 atgttcgatt tgaacgcatt catcccttcc aagatggtaa cgggcgagta ggtcgattga
     8401 ttatgtttaa agaatgtctc aaacatggcc atgtcccctt tatcatcgga gatgacatga
     8461 agtattttta ctatcgtggc ttagccgagt ggggagagca gaatggtttc ttgctggata
     8521 cttgtctagc agcacaagat agatttaagc agtatttgga gtattttagg gttgaggatt
     8581 agtggtaact tgcaattagg agaatgaatg catagcggaa gaactataac aaaagaatat
     8641 ctaaaagcga atgaaataac aggtcagtat tttgataaaa ttgaaacaag aaagtttgaa
     8701 ttatttttaa aatacactac agataagttg ttagcactaa tcctattagt attactttcg
     8761 ccagtcatca ttgctttatc tatttggata aaactagaca gtaagggacc cgttttttac
     8821 cgtcaagaaa gagttacaag atatggtcga atttttagaa tatttaagtt tagaacgatg
     8881 atttctgatg cggataaagt cggaagtctt gtcacagtcg gtcaagataa tcgtattacg
     8941 aaagtcggtc atattattag aaaatatagg ttggatgaac tacctcaact gtttaatgtt
     9001 ttgactggtg atatgagctt tgttggtgtg agaccagaag tgcaaaacta cgtagatcag
     9061 tacactgatg agatgcttgc aaccttactt ttacctgccg gaattacttc accagcaagt
     9121 atagcatata aggatgaaga cattgttttg gaaaaatatt gttctcaggg ctatagtcca
     9181 gatgaagcct atgttcaaaa agtgttacca gaaaaaatga aatacaattt ggaatatatc
     9241 agaaactttg gaattatttc tgattttaaa gtaatgattg atacagtatt aaaagtgata
     9301 aaataggaga ttgatatgac aaagagacaa aatattccgt tttcgccacc agatattacc
     9361 caagctgaaa ttgatgaagt tattgacaca ctaaaatctg gttggattac aacaggacca
     9421 aagacaaaag agctagaacg tcgactatct gtatttacag gaaccaataa aacggtgtgc
     9481 ttaaactctg ctactgctgg attagaacta gtcttacgag ttcttggtgt tgggccgggg
     9541 gacgaagttg ttgttcctgc tatgacctat actgcctcat gtagtgtcat tactcatgta
     9601 ggagcaactc ctgtgatggt tgatattcaa aaaaacagct ttgaaatgga ttatgatgct
     9661 ttggaaaaag cgattactcc gaaaacaaaa gttatcattc ctgttgatct agctggtatt
     9721 ccttgtgatt atgataagat ttataccatc gtagaaaaca aacgctcttt gtatgttgct
     9781 tctgataata aatggcagaa acttttcggg cgagttatta tcctatctga tagtgcacac
     9841 tcactaggtg ctagttataa ggggaaacca gcgggttccc tagcagattt tacctcattt
     9901 tcttttcatg cagttaagaa ttttacaact gctgaaggag gtagtgtgac atggagatca
     9961 catcctgatt tggatgatga agagatgtat aaagagtttc agatttactc tcttcatggt
    10021 cagacaaagg atgcactagc taagacacag ttaggttctt gggaatatga tattgttatt
    10081 cccggttaca agtgcaatat gacagatatt atggcaggta tcggtcttgt acaattagaa
    10141 cgttacccat ctatgttgaa tcgtcgcaga gaaatcattg agaaatacaa tgtaggcttt
    10201 gaggggactt tgattaagcc gttggtacac ctgacggaag ataaacaatc atctatgcac
    10261 ttgtatatca cgcatctgca aggttttact ttggaacaac gaaatgaagt cattcaaaaa
    10321 atggctgaag caggtattgc gtgcaatgtt cactacaaac cattacctct tctcacagcc
    10381 tacaagaatc ttggttttga aatgaaagat tttccgaatg cctatcagta ttttgaaaat
    10441 gaaattacac taccgcttca taccaacttg agtgatgaag atgtggagta cattgtgcat
    10501 acaattgtta atattatttc taattttgaa agtggcaaac attgaaagaa aaatatcaaa
    10561 tattatttaa tccaagtgca aatgaaattg agcaagtagt tgcaatacat cttgccacat
    10621 ttgaaggttt ttttctaact tttttaggga aaggcttttt aaaaaacttg tatactggtt
    10681 ttttggaaca cccatcttca gaacttatgt taataactca agacaataat gttgttggtt
    10741 ttttagcgta ttctaaaaat ataagtgcat tttataaatg gttactgaaa aataaatttt
    10801 ttcaattttt gtggtatagt tttggagcca ctattcgtaa ccctaaggcg agtatccgat
    10861 tacttagagc tcttacttat ccacagaaaa gtcaaagtga agacagttat gttgagcttt
    10921 cttcaattgg agttaatcct gattatacta atcatggatt aggcagtatt cttattactg
    10981 aatttgttaa aagacagaat ttttcggaaa taaaatatat cagattagcg acagatgcaa
    11041 taaataatga taaagtaaat gctttttaca aaaaaaatgg ctttcaacta tacagtacat
    11101 atttcacacc agaaggtcgc aaaatgaatg aatatagata ttatggggat gagacgtgaa
    11161 aaaggcatta ataatttcaa ctgtaagtag acaattttat ctttttgaac aagtaaatat
    11221 taaaattttg aaagagcttg gttatgaaat acatggggcg gcaaattttt ctgacaggag
    11281 tgaacgattg aaggaggtta atattattga acatcacgtt gaattttcaa gaaatcctct
    11341 ttctattcgt aatatttttg catttaaaaa actactttta attatacgtg aaaataaatt
    11401 tgacttaata catgcccatt cacccgtagg aggtgtatat ggaagattgg cggctaaaat
    11461 ttgtaatgtt cctcggataa tatatactgc ccacggtttt catttcttta aaggagcacc
    11521 tcaacaaaat tggttaatat attatccggt agagaaactt atgtcttatt taacagatgt
    11581 attaatagtt attaacgagg aagattataa attagcaaag agcaaattta aacttaaaca
    11641 aataaatttt gtatcaggta ttggggtaaa ctattctaaa tttaaaccta tttcttttga
    11701 aaaaaagatt gaaaaaagga gacaatttgg ttttactgaa aatgatcaaa ttttaatata
    11761 tgttggggaa ttgaaccatg gaaaaaatca aggcgttcta atcgaagcga tgtcagagat
    11821 tgtgaaaaaa aatccaaaag tttcattatt attggttgga caaggaaagc tcttttctga
    11881 atatcaagaa aaaatacata attataattt acaaaataat gttcatttgc ttggataccg
    11941 tgatgatgtt gttgatttat tgcaaatagc tgatattgca atatcaagct cattgcgaga
    12001 gggcttacca gtaaatttgt tggaggccat gggggttgcc cttcctttgc ttgtttcaga
    12061 ttgtcgtgga aatcgtgatt tagtgacaga taatggcatt gtgatacacg ataatatagc
    12121 gaaagaatgg gaaaagacaa tattagatct ttttgattca ccgtcaaaat tgagagaatt
    12181 tggtttgaat agtttgagtc atgtaaaaga tttttcggaa gaacaaatta gaaaaaaaat
    12241 gttggagatt tatactgatt aagtatcatc attcttaaac tttgggaaga ttgatgagtt
    12301 acaggaactc agcagaacta cttttatctg aattgttctg aaaaaataat aaataatttc
    12361 gggggaaagt gatgagtaaa atcagagtta tgcatttgct taaaagcaat cgatattctg
    12421 gtgcagaaaa tgtggtatgt caaataattg aatcgacaag aaatcaatca aatgactatg
    12481 aaatgatata tgtttcccca aagggcccaa ttgaaggaat tttggaagat aaggatatta
    12541 atttctttgg gttaaataat tttacacaaa aagagatagg acgtgctata gatttattaa
    12601 atcctgatat tattcatgca catgatttta gtgcaagtgt ccgagtatct aagtataaca
    12661 gaaaaattat ttcccattta cataataatc cgacttggtt ttccaaatta gattatagaa
    12721 cattgattta tacatttagt attcatagat tcaagagaat aataggtgta tcgagatcaa
    12781 ttcaaaatga gtacattttt aagaataaat tgaataaaaa attcttggtt ctgcctaatg
    12841 tagttgataa aactaaagtt ttaaatttag ctaatgaaga gagctattca tcggatttat
    12901 tatttgtagg tagattatca agagaaaaag atccactgtt ttttttacag attgtaaaaa
    12961 aactagttga gtcaaatcct aatattcaag ctattatggt tggagatgga gctttattaa
    13021 atgaatgcga agaatatatt gtttctaatt cattatttaa taatgttaaa atggttggtt
    13081 ttgaacaaaa cccatataag tacatgtcaa aaactaaaat tcttattatg acttctgtat
    13141 atgaaggatt cggtttagtt gcaattgaag cgatgttatt agggaagcct gtagtttgta
    13201 gactagttgg aggattggtt gatattttag ataatgaaac gggtgcgttt tgcacaacga
    13261 ttgatgaatt tgtatttaca ataactcaat tactagctaa ttctagtgat attaaacttc
    13321 gtgaaactaa ggctgtcgaa agagcacaaa ggtattgtga tatttcatct tttcaacaaa
    13381 ctttagatac tctttataaa gaaatattag ggttgggttg atttatggtt cgaagcatga
    13441 aaaaaaatta tggtttagag tttatatttt tactttttgg aagcggaatg attttctatc
    13501 aattattccc tccgattgtt atatcgttaa caagtatggc tttttttact ttttgttttt
    13561 acagtttaaa agctaggtat agtgttattg aaacattggt gttgctgacc attattggga
    13621 ttccaacgtc aatgatttct attttaggga ttagttactc tatttttcct cttacttggt
    13681 atactacttt tatattatgc tcaatctttt taattatact aactggtaaa ttaagaaaaa
    13741 gttatttctt atcgataaca ttttttgcta tcatagaatt tacattgtgt ttgatggcaa
    13801 atagttttac agatgctatg aaacaatact taatgattat atcgttttta tttgtttttt
    13861 ttattgggga atatttaaaa gtaaatgtta aaaacgactg tttttataat gacttacgtt
    13921 ttttgtattt aataggagtt ttttgtgtcg caaatcaagt attgtttcaa aaattttata
    13981 ttttaataac aggaagtgtt atcggacact atattattat agggcaaagc agggttgcgt
    14041 atggcgggat tatgggagac tttagttttg caaccctgta ccttgcatca ggctgtttac
    14101 taattctgtt attatattta aatgataaaa gatttaaatt ttggttgttt tttatttctg
    14161 aaagtttttt gttactttca atgcttgttg tttcttcgcg aactggtatt gtttctttgg
    14221 ttattacagt tgtgctttac tttattttta attttaaaaa aatacctaag cgcatgcttg
    14281 ttgtactagc tttgggttgt ataggagttc cgattcttat tgataaaatt ttgtcctcta
    14341 gaggaggaca agccttatta gaaacatctg gtcgatctga aaattatttg caatcgatta
    14401 ctttttggtt agagaagcct ttgtttggtt atggattagg attagaaaat ttatatcact
    14461 ctaccggatt agcagtgcct cataattttt ttatacaata tttattacaa atggggcttg
    14521 ttggattgtt tctaattatt ataccattca tcatttttat tacaaatgat gtcttaagga
    14581 ataattatag caagtggttg tttttattag ttgtaattgg ttcgatgttt attcctgata
    14641 tagtgagttc tagattttta tacggaatcg ttttgttgtg tacgattgag aatcggatgt
    14701 tcgactataa taatttggag gtattaaaaa gtgaaacgta aggctgaatt ggttgctatt
    14761 aaggcaagga attatttttt ggcaaaaaaa tataagagag caactttttt ttctacagtt
    14821 ttgagagtgg tattttcttg cgatttacca gcagaagttc aatttcatga gtcaattcag
    14881 ttggtacata atggattagg ttgtgttttt cacccaaaga cagtcatcgc ggagaattgc
    14941 aaaatatatc agaatgttac cataggtgga aatggtaaga ttataaacgg ggaaatcata
    15001 agtggcgcac ctaaattaga aaaaaacgtt gcggtctttg ctggtgcttg tgttttagga
    15061 cctattacaa tcggtcatga ctctatagtt ggtgcaaatg cagttgttac taaaaatgtt
    15121 ccacctcatt ccttggtaat tgggaatcct gcacaagtta aagaattgaa ctttgagtat
    15181 aattttgaat aaaggtaata aaatgagtag ttttcacaaa caagtaggaa atgctttgaa
    15241 atggtcatcg cttgctgaga tagttgcaaa acttataact ccactttcta ataccattct
    15301 tgcaagatta ttaactccag agcattttgg cgtcattgca acaattacaa tgataataag
    15361 ttttgctgat atatttagtg attctggctt tcaaaaatac ttagttcaac atgagtttga
    15421 aagtgagtat gaacttgata aggcagcaaa tgtagctttt agcagtaatt ttttgatttc
    15481 aatattttta tggctattta tttctttatt aaatgaacaa atatcttcaa ttgttggaaa
    15541 tcctggcttg ggtattgtaa ttatagttgc aggtttctcg ttaccaataa cagcattttc
    15601 cagtatccaa agtgcattat ttaaaagaaa gcttgaattc agagttttat tttatgcaag
    15661 aatattatcg tcgctagtac ctcttttaat tacagttcct ttggcaatgc ttggaaaaag
    15721 ctattggtca ataattattg gtaatatcat tgggaatatc ataatatcag tagttttgtc
    15781 ttatctttct gactggaaac ccaatttttc ttttaataga tttattttct ttgaaatgtt
    15841 ttcctttagt acatggtcat tgttcgaatc cataggaact tggctttctt cttacattgg
    15901 tacttttata gttggaagta ttttaagtca atattattta ggattgtata aaacaagcat
    15961 gactacagta aatggaatat ttgcaataat tacttctgct actgtttcag tattgttttc
    16021 ctcattatca aggctacaaa gcgatagaac tgagtacgat tttatttact tggattttat
    16081 taatttggtt tcgattgtaa ttttcccaac tggagtcgga atatatattt ataaaaattt
    16141 agtaactagt atacttttag gaaaacaatg gatggaagcc gcgagttttg ttggaatata
    16201 cggactaatg tgctgtataa cgcttgttct tggacaattt gcttcagaat atttcagagg
    16261 tttagggaaa cctaaagcga atgttttgat gacttttctt catttgattg tattaatacc
    16321 aacattgatt ttgagtgctg aggatggctt tctaactttg gcatatgcaa gttctttgat
    16381 taagattcaa cagatactta tttattggtt gattctttgg tttggtttta aatttaatcc
    16441 acttcgaata tttaattatg tctggaaggg gttattttct tcgttgatta tgggaatatt
    16501 cggatatata tttattcaga ttaatagtgg cattatatat cagttcattt ctattgtagc
    16561 ttgtgttatt atatatttaa tgtgttatat ttatattttt aaaggtaaac tggaattaat
    16621 tcggataatg aaaatcttca ctggaatttg attagagtat actagaaggg ataataaatt
    16681 gataaaagtg ttacattata caccaggatt ccacggcggt ggtatcgaat caaggttgct
    16741 tgattggtat agaaatatgg atagagagaa agttcagttc ttcttaataa aattaaacca
    16801 aatagacaac actgaagata ttaaagaatt tttatcttta ggtggaaaat tctttaattt
    16861 acccccattt aacttgacta ctggattgag acttgaaaaa atgatttaca atattatagt
    16921 tgaggaaaaa atagatattg tacatgttca tgatactaat tcaggattgt ttgcattgaa
    16981 ggcagcaaag agggcaaatg tgaaatgtag aattttacat tctaggacga ctaatttttt
    17041 acccaatgaa aggaataaaa taattaagca agcgtttatg aaaatcgctc ccaaatttgc
    17101 tacagattat tttgcatgtt cttttaacgc tggtatttgg ggatgtggaa aaaataatgc
    17161 tgatgagata gttgttatta agaatgggat tcaggatgat agataccaat acaatagtgc
    17221 aattcgtatg agtataagaa aagagttagg aattgagaat aagtttgtag taggaaccgt
    17281 tagtcgacta tctcctcaaa aaaatatacc ttttcttatt aaaatattta atgattacta
    17341 taaaatagat aataattcaa tattattaat tgttggtggt ggtgatgaac aatctgtaat
    17401 agatgaaata aataattatc ctgaaataaa aaacaatgta attatagccg gacctaaaaa
    17461 aaatatttgg gattattata tggctatgga tattttttgt ggcacatctt tttatgaagg
    17521 ttttggaaca actgctatcg aagctcaagc atctggactg ccaacccttc tttctcaggg
    17581 gtttccagca gaaatcgagg taactaactt tgttaggaga ttggatatag tggatactga
    17641 ggagtggatt cgaaatatta aagaatttaa gaatgaaaga tattcagaaa gtggaataaa
    17701 gtcaatagct gcatatggtt attctgctaa gaaggtagca aaggatttag agaattttta
    17761 tttggagcat tataatgaat ttaattaaat acaattatca aaatagaata tcgtatattg
    17821 atttatttaa agggtgcggt attttattaa tgataatggg gcatgttgga tttgggcata
    17881 cttttgaaaa atatatccac gcatttcata tgccaatgtt cttttttata tctggttttt
    17941 tattcaaaaa aaaaacaatg gatttttcca attggattat taaaaaattt aaatctctaa
    18001 tacttccgta tattttatgg ggagttatca gtttagttgt ttggtatgcg tttaaaggta
    18061 tagactggaa gtattttcgg attctatttt gggacaatac gagtgggatt gctatctctg
    18121 gtgcattgtg gtttttgatg gcgttgttta tttcagacat catttttttc ttggtagaat
    18181 ataacgttta taatacattt attaaattaa ttatttatat atttatttct agccttggca
    18241 tttcacttcc tttaatggga ctaacattac catttgctat ttgttcggct tgtgtaggaa
    18301 caagttttat ggcgataggt tattatataa aaagtaatga gattattctg agaaatttct
    18361 tcaaattgaa taccatatat atatttagtt cttttttaat tggttcaata cttgtaacat
    18421 ttaatgagac agttaatatg aggacaagta attatggtaa catatttttg ttctatactt
    18481 catcgctatt aataatattg gctctacttt attattcaag aaaaattgat aaatacttaa
    18541 aaatttgtcc cctgctcgta attggttcgg attcaattac ttttgtatgc ctaaatcaaa
    18601 tttgtattta tgctataggt tttttgtgta acagatttgg cttaaaatgg gatggtttat
    18661 tttttgattt cctcttttta ataatagtat tatttatttt atggattgta aatgaattga
    18721 ttatgagatc aaattttaaa tgtttgatag ggaaatagtt taaatataga aactaatacc
    18781 atttttatcg ggaatatgtg caagaaaatt aattttcaat tatggaaatt gcaaacgtga
    18841 ttttacctat gtagatgaca tagtagaagg tgttaaacgt gtcatgtttg gcgcaccgca
    18901 gaagagaagc ggaagtgatg gtctcccaat tcctccatat gcaatttata atattggcaa
    18961 tagcaatcct gaaaacttat tggattttgt tcacatattg agtgaggaac tagttttggc
    19021 aggagtattg ccagcagatt ttgatattga agcacataag aaacttgtgc ctatgcaagc
    19081 aggagatgta ccagtgacct atgctgatac ctctgatttg gagagagatt ttggttttag
    19141 cccctctacc acactcagag aaggcttacg ccaatttgct caatggtata aagagtatta
    19201 caaatagttt tattttgcta ttggggcgat agccttttgg acaaatgtta taatttgtgt
    19261 caggattagt aagaaaggac taataaataa agttcactgc taataaggag gttttatgta
    19321 tagtaagtat gaaattactc acgtagcatg tgatagaaaa caggatgtaa agacagttta
    19381 taatgagtac aaggctaata agcaacaatt catcaacaaa attgcaaatt gtgttaaaga
    19441 tgacgtatta aagacttatt ttagtcggat tattcatgat tatgatgaga aaatttacat
    19501 tgattctgta gagagagttt taaagaatcg agaattagta tctcaaaata aagataaaat
    19561 tttaaaaaca ttgaaatttt atgataaaag aaatctgtct gattgtgagt ttttaaatga
    19621 gagtaatgta gaagtatatc taaactccct tcatattaac aatgacaggc ttgctttcta
    19681 cttaaaacag ttaaatggtg attataatga tgcttaagtt gtatatttga ttttactttc
    19741 tttttaacaa tcattatttt gatttttttt gtaacaaatg gtatactttg tatatcattt
    19801 ttttgatgag gtgaaattat gagtaacaaa gaattttctc aagaatttct taaaactatt
    19861 attttttcta aaagaaaaga gttaggatat tctcagcagg aactttctga tttgacagga
    19921 ataaataggg ctatgattag caagttggag caaggggagt atcttccttc gattccccag
    19981 ttattggctt tgagcaatgt gcttgagttt gaaattaaca gtttatttgt ttctgatttt
    20041 ccgaagtcaa tcggcactct tccggcaaaa aaaatcgctg tcgcaggaac gggctatgtt
    20101 gggctatcta ttgctgtttt actagcccag catcatcaac tcacagctgt ggatattatc
    20161 caagaaaaag ttgatttaat caatgcaaag aagtctccta ttcaagatga ttatatagag
    20221 aaatatctcg cggaaaagga cttgaattta gtagcaacac ttgatgcaga aacagcctac
    20281 agagaggcag aaattgttgt gattgctgct ccaacgaact atgatagtgc taagaattac
    20341 ttcgatacaa gtcatgtgga agaagttatt caaacagtat tatcggtcaa ccctcaagct
    20401 ttaatggtta tcaaatcaac gattcctgtt ggctttaccc aatctatgcg tgagaaattt
    20461 gctacggaca atattatttt tagcccggag tttcttagag agtcaaaagc actttatgat
    20521 aatctttacc cttcacgaat tattgtgtct tgtgaagaag ggactccaac ttcggtagta
    20581 gaaggttcaa gattatttgc ctcacttcta caagagggag ccttgaagga agatgttgat
    20641 gtactctata tggggtcgac agaagcagaa gcagtcaagc tctttgctaa tacttactta
    20701 gccctgcgtg tttcttactt caatgaattg gatacctatg cagagttgaa agggctggat
    20761 accgaatcca ttatcaaggg tgttggctta gatccacgta ttggtgacca ctacaataac
    20821 ccttcttttg gctatggtgg atactgtcta ccaaaagata ctaagcagtt gttggcgaat
    20881 tacaatgatg ttccgcagaa tatgatgtct gctattgtag agtcaaatag gactcgtaag
    20941 gattttattg ctgatcaaat tttgaagata gctggttatt atgattattc gtcacatgat
    21001 caatattctc aatcgggaga aaaagaagtg atcatcggtg tgtatcgctt gacaatgaag
    21061 agtaattctg ataatttccg tcaaagttct attcagggag ttatgaaacg tctaaaagcc
    21121 aaaggggcaa aagtgattat ttttgaaccg actttagaga atggttccac cttctttggt
    21181 tcaaaagtga ttaataattt gaatcagttt aaatctaaaa gtcacgcaat tgttgcaaat
    21241 agatacgact ctgtcttgga tgatgtatta gataaagtgt atacgcgtga tatttttaga
    21301 agagactagt cttctaaagc tacattttta attgtgtgtt tagatttcta ggggagaagg
    21361 ctcgttgctc ttctctctct
//
LOCUS       DASFQD010000028        20925 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.028, whole genome shotgun sequence.
ACCESSION   DASFQD010000028 DASFQD010000000
VERSION     DASFQD010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 20925)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20925)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20925
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.028"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..5450)
                     /locus_tag="U1021_000802"
     CDS             complement(<1..5450)
                     /locus_tag="U1021_000802"
                     /inference="COORDINATES: protein
                     motif:HMM:NF019202.1,HMM:TIGR01168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
                     /protein_id="HEM4711367.1"
                     /translation="MNRSKKKSFDWYGARQRFSIRKYHIGAASVLLGTTLVLGAGTIV
                     GAETGVNGGGTSDGTTSTTQQQSDNQGNNSSGVQTGNTTNSTANVQPAGDTGSASSQP
                     VGTSRSANTGTQGDGTTNPTVDEPIIKFPTSESDPVPNGYVLVSFQKPEYGSYVFNNL
                     PGEFPNATKQSINSRPIQLEVRFWVKEGTTWGQLIEDPNWRWPTMKPNDGDVFIDWNI
                     GYGYSNRFDFNKKKDQPVTTTYFFPVVGYEVEEVEPLNANVNAFLAWYSPEGKSKWLI
                     VTFDAGKGSMTYKNKQYTSRSVAAYFQGIGYDNRQFTSKVVSPTLANHTFVRWQTRDG
                     VVLPKSGTITTETTYEALYLAHPQNQVAVFDSTKLTDSEKEQVKQKIYDANPDLSTGV
                     PQVIKAIEISDTGEATVTFNDDTAVKVPSATLTNEDKATAKSNAKAEIEKDAMEKSAA
                     INASTLTNEEKAAKLADVQDAKDRADIAIDKATTTEDLTKAISDGTAAIEAVSTTSTI
                     KTKAKEALEEAYNTEKAEIENSVLTADEKAIKQADLSKAKENAIKAVDDATTDSAVEG
                     ALNNGKATIESTYTAIIKIPSSASEPAPQGYVTVTFAGHKYTRGFTLGTQTGSSVKVF
                     VKNGVTWGTLLDDPAWQWPTVKTDEGDTVVGWSVNDYNYKPGNAFARDNYKDTDVANI
                     TLYPNVVFEVEDVNGDGTKKGYLTQYGPDEQNKWIFITFDAGKGQLSGSKQSKMVAVS
                     NNLYPIDFSNKKFKEKVESPTLQGHTFVRWQTEDGVVLPESGKITTDTTYKALYLAHP
                     TDKTVVFDANKLTETEKDSLKQAIYDANPDSANLIQSITVSDTGEAKVTYNDGTVVTV
                     PASDLINEDKEPARNLAKEEIDKASKEKVAEINASALTDEEKAAKLTEVQEAKDQANN
                     AIDNATTTEDLTKALEDGKSEINAINTTTSPKKAVAKQDLETAYNAKKDAITNSGLTA
                     EEKDAKQAELDKAKEEADKAIDTATDNAGVDAALEAGKTAIAGIDTSTSPKKAAAKEE
                     LKAAAEDAKNAIDANDNLTDAEKQAAKDAVDAEVAKAEKAIDAATKADEVDAATLAGT
                     KAIAADVLDAAKQDAKNKIAKDVEAANAAIESNPNLSEKEIADAKAAVADEAKKANDA
                     IDAATTPEAVQEKEEEGTKAIAADVLDAAKLDAKNKIAKDLATVEAAIDANSNLSDGE
                     KEVAKLAAQAKAAEAVANIEKATTPEAVQTLEDAAVKDLANIEIKAAYDDAVKAIEAA
                     DNLSTAAKTQALEDLKKARQAAEEAIKTASTADEVAKGALDGLKSIAKVEAKAAADDA
                     KAAIAQNSNLTDAEKKVYTDAIDKALKDTETKIDAATDADTVDAETVLAQKDIAKQEV
                     AAATADAVKGIEANTNLTDAEKDEYKATVTKAAETAEKAITDATTAADIQSKTFDATQ
                     DVAKEEVKADAADAIAGIKANDNLSDTAKKEAIAAIEEARNTTLENIENAKTAKEVDT
                     ATLDAEKANAKAEIKAAADDAKKAIDENANLPASDKNALKLAIDAEVAATNLEIDNAK
                     TAEEIDAATLATEKSIAKAEVKAAAEDALQAIDENANLTDDEKAKAKADVYVELSKAE
                     KAIDKATTADAIDNATLVGEKAFATAELEAAADDAKKAIDANTHLTDDQKQAAKDAVD
                     AELAKAKEAVVAAKTADEVDAATLVGEKAIAKEEIKAAADDAKKAIDANSNLTDDEKA
                     TAKAAVDDEVAKANEAIDKAATADAVDTATLVGEKAVAKEELKAAADDAKKAIDENAN
                     LTPEEKAAAKKAVDDEVAKAEKAIDAATKAEEV"
     gene            complement(6178..6837)
                     /locus_tag="U1021_000803"
     CDS             complement(6178..6837)
                     /locus_tag="U1021_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003046130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4711368.1"
                     /translation="MFLRASGRQAVRFIEPEHLKQFLDYAEQLASRNFTKYYQYVIFK
                     LLLATGCRIGELSALELSDIDLEAGTISISKTYSMELHIIGTTKTKAGTRIISIDKKT
                     VLLLKQYQNRQRLMFLEVGACAPGVVFATTLREYLPRVSLQEVINCRCKALGIPRFTC
                     HAFRHTHASLLLNAGITYKELQYRIGHSNIAMTLDTYGHLSKDKEKEAVLYYEKAMNS
                     L"
     gene            6814..7089
                     /locus_tag="U1021_000804"
                     /pseudo
     CDS             6814..7089
                     /locus_tag="U1021_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941794.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ArpU family transcriptional regulator"
     gene            7258..7449
                     /locus_tag="U1021_000805"
     CDS             7258..7449
                     /locus_tag="U1021_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002263545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HEM4711369.1"
                     /translation="MPLTGKEMAKLAEANGWKEIRVNGSHHHFKKEGFSKIVTIPVHG
                     NKDLGKGLEKKILRDLGLL"
     gene            7485..7862
                     /locus_tag="U1021_000806"
     CDS             7485..7862
                     /locus_tag="U1021_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002282907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HEM4711370.1"
                     /translation="MLKSYPAIFHKDEQGYWVEFPEFSGGTQGDNLEEAMYNARDFLE
                     SSIALYIDEGMELPKVSDIKELSAPDGFVSMIQADPTPYIKNNKAIRKNVTVPEWLTK
                     LADREGLNYSEILTTALETRLQV"
     gene            complement(8184..10451)
                     /gene="glgP"
                     /locus_tag="U1021_000807"
     CDS             complement(8184..10451)
                     /gene="glgP"
                     /locus_tag="U1021_000807"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan family
                     phosphorylase"
                     /protein_id="HEM4711371.1"
                     /translation="MINLQNFVQSMYAKRIEDCTDQELYYALLAFTKQQSEAKYTNDQ
                     KKKVYYISAEFLIGKLLSNNLINLGLYDEVKSQLAAAGKDLIASEDVELEPSLGNGGL
                     GRLAACFLDSIASLGLNGDGVGLNYHFGLFRQLFEYHQQSAVPNEWITPRSWLTESPI
                     SYQVPFANFTLTSKLYDIDVPGYKMERKNRLRLFDLGSVDDNIIYDGIEFDKEDIFRN
                     LTLFLYPDDSTDEGKVLRIFQQYFMVSNAAQLLIDEAVAKGSNLHDLPDYAVVQINDT
                     HPSLVIPELIRLLELRGISFDEAVEIVKKMTAYTNHTILSEALEKWPLDFLNRVVPHL
                     VPFIVELDRRAKEVKDDPAVNIIDEHGRVHMAHMDIHYGYSINGVAALHTEILKTSEL
                     KAFYELFPEKFNNKTNGITFRRWLMHANPSLASYLDGLLGHGYHHDASELEKLLEYKN
                     DKELKSWLEKNKQHNKRKLQRHIAKTQGVEVNPESIFDVQIKRMHEYKRQQMNVLYVI
                     HKYLDIKAGNIPARPLTVFFGGKAAPAYTTAQDIIHLILVLSQVIKNDPDVAPHLQLV
                     MIENYNVTEASFIIPAADISEQISLASKEASGTGNMKFMLNGALTIGTDDGANVEIHE
                     LVGDENIYIFGQDSQTVIDHYANGTYHPYSFYEREAIRPLIDFITSDTIRHAGGIDER
                     LWRLQDNLKHNDHFMTLLDLEDYISTKEQMLADYEDRDSWLEKVIVNIAKAGFFSSDR
                     TIQQYNEDIWHLEAK"
     gene            complement(10589..11302)
                     /gene="deoD"
                     /locus_tag="U1021_000808"
     CDS             complement(10589..11302)
                     /gene="deoD"
                     /locus_tag="U1021_000808"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007519526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEM4711372.1"
                     /translation="MSIHISAKPGEIADKILLPGDPLRAKFIAENFLEDAVCFNEVRN
                     MFGYTGTYKGHRVSVMGTGMGMPSISIYAHELINDYGVKKLIRVGTAGSLNKDVHVRE
                     LVLAQAAATNSRMINIDWPEYDLPQIADFDLLDKAYHISKELNLTTHVGNVLSSDSFY
                     SPKLFSRNLELGQLGVKAVEMEAAALYYLGAKFGVQTLAIMTISDSLVNPEEDTTAEE
                     RQNTFTDMMKVGLETLIAE"
     gene            complement(11335..12144)
                     /locus_tag="U1021_000809"
     CDS             complement(11335..12144)
                     /locus_tag="U1021_000809"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEM4711373.1"
                     /translation="MSLLAKINETKTFLEEKGMIKPEFGLILGSGLGELAQEVENAIV
                     IDYADIPNWGKSTVVGHAGKLVYGDLAGRKVLALQGRFHFYEGNPMEVVTFPVRVMKA
                     LGCEGVIVTNAAGGIGYGPGTLMAITDHINMTGQNPLIGENLEEFGPRFPDMSNAYTK
                     EYREKAHAIAEKLGIKLDDGVYLGVTGPTYETPAEILAFKTMGAHAVGMSTVPEVIVA
                     AHSGMKVLGISAITNFAAGFQSELNHEEVVEVTEQIKGNFKGLVKAILAEL"
     gene            complement(12156..12512)
                     /locus_tag="U1021_000810"
     CDS             complement(12156..12512)
                     /locus_tag="U1021_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family transcriptional regulator"
                     /protein_id="HEM4711374.1"
                     /translation="MEKLTVYINPDCSKCKKLRILLSSQGMEVKWVNYLETPLRGAEL
                     TALLKKMDSQPSAVIRLTEEERAELSEEEIFERLVKEPATLNRPIIEREQTAFLCRPL
                     EIIKEKMPEYDWSDYL"
     gene            complement(12512..13723)
                     /locus_tag="U1021_000811"
     CDS             complement(12512..13723)
                     /locus_tag="U1021_000811"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HEM4711375.1"
                     /translation="MPKFKRVHLVVMDSVGIGAAPDSDKFFNAGVADTESDTLGHISE
                     KAGLEVPNMTKIGLGNIPRDTALATVPAESHPTGYVTKLEEVSLGKDTMTGHWEIMGL
                     NITEPFDTFWDGFPEEILTKIEEFSGRKIIREANKPYSGTAVIDDFGPRQMETGELIV
                     YTSADPVLQIAAHEDIIPLDELYRICEYARSITLERPALLGRIIARPYVGEPGNFSRT
                     ANRHDYAVSPFEETVLNKLADAGVPTYSIGKISDIFNGSGITNDMGHTKSNMHGVDVL
                     IDTLKLSDFEEGFSFTNLVDFDAVYGHRRNIEGYRDCLQEFDARIPEIIDNMREDDLL
                     LITADHGNDPSYAGTDHTREYVPLLAYSKAFKGSGVLPVGHFADISATIAENFGVEKA
                     MIGESFLEKLV"
     gene            complement(14050..14724)
                     /gene="rpiA"
                     /locus_tag="U1021_000812"
     CDS             complement(14050..14724)
                     /gene="rpiA"
                     /locus_tag="U1021_000812"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEM4711376.1"
                     /translation="MTNLKEQVGIKAAEFVTDGMIVGLGTGSTAYYFVQEIGRRVAEE
                     GLQITGVTTSHATAEHAASLGIPLKNIDEVEYVDLTVDGADEVDGDFNGIKGGGAALL
                     MEKVVAVNSKDCIWIVDESKVVQTLGTFKLPVEVVQYGAENLFRLFEKKGYRPSFRMR
                     NGEKHITDMQNFIIDLDLRRIEDTYALAEELDRTVGVVEHGLFIGLISKVIVGTPEGP
                     NLIEKK"
     gene            15833..17206
                     /gene="mnmE"
                     /locus_tag="U1021_000813"
     CDS             15833..17206
                     /gene="mnmE"
                     /locus_tag="U1021_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002906470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEM4711377.1"
                     /translation="MITKEFDTITAISTPLGEGAIGIVRLSGTDAFAIASKVFKGKDL
                     ATVPSHSLNYGHIIDPATGQVLDEVMIGAMRSPKTFTREDVIEINTHGGIAVTNEILQ
                     LLIRQGARMAEPGEFTKRAFLNGRVDLTQAEAVMDVIRAKTDKAMHNAVRQLDGSLSQ
                     LINDTRQEILNTLAQVEVNIDYPEYDDVEEATTELVREKTLQFQTLLENLLRTARRGK
                     ILREGIATAIIGRPNVGKSSLLNNLLREEKAIVTDIAGTTRDVIEEYVNIKGVPLKLI
                     DTAGIRETDDIVEKIGVERSKKALEEADLILLVLNASEPLTEQDRNLLAISDMANRIV
                     LLNKTDLEEKIEADQLPEDVIRISVLKNQNIDQIEEKINQLFFKNAGLVEQDATYLSN
                     SRHISLIEQAVQSLQAVNDGLEMGMPVDLLQVDLTRCWQILGEITGDAAPDELITQLF
                     SQFCLGK"
     gene            17317..18393
                     /locus_tag="U1021_000814"
     CDS             17317..18393
                     /locus_tag="U1021_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711378.1"
                     /translation="MKKIIICIALLSCLVFPFIGWKLYAYQHNKISLTENADFYLVYP
                     GKVEAFQLNGQEPELLHTQKMNSEGYFGSGENYVIDNRYLVFANDQQKFINDNLISID
                     FNTGTVLRKPSQYSSYISGTDGNHFYTAGAYHMLAQFDKQFEAIQTLVLNDDFILHAP
                     VYVDDTSVYLTGVVRELNQDGTEENVLIVFDKKDFSKQEIFKYDNSIATGDGLLVNGT
                     IYLTIFGKRAPEYEDGQVPNELLTFDTRSKTFSSIKLEHPSPSTLHALKDENLLLIEH
                     QNGMFSPLSFTIYNTQTGEQSYHTLKDLNPRPHYIDHIRQIDDKRLMIILANQLLIYD
                     MEAKSITSQTTLSEDYVSGVWINP"
     gene            complement(18426..19007)
                     /locus_tag="U1021_000815"
     CDS             complement(18426..19007)
                     /locus_tag="U1021_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEM4711379.1"
                     /translation="MKKKWLAILIPVFALLFLGMGAIGQYNGLVDSHAEVENAQANVD
                     TQLQRRYDLIPNVVAAVKGAMEHEEEIFTAIADARAKIGSSQVGTSDYNQAQSQLDSA
                     VSRLLMVTENYPQLTANQQVSDLITELEGTENRILVARKDYNAVATAYNKKIKRFPTS
                     LYANLFGYEKVDLFQASTDAATTVPSVDLQDEE"
     gene            complement(19023..19802)
                     /locus_tag="U1021_000816"
     CDS             complement(19023..19802)
                     /locus_tag="U1021_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HEM4711380.1"
                     /translation="MKKYLYYLLGFLLLLFSLGQPSLVGAEGIPARPIDTTVVDETQL
                     LSSETIANIDQLNQTWAASEQQLQVGVYVTESLSRDIESLSNATFRDWQVGFAGTDNG
                     ILLVIAIADREFRIETSDNAATVLTDVEAKDILENAREFFRQEDYDGGVTYIVQSIGD
                     RFYGTSLGQEQLAAMEERTSAESDSFVWFMIVILVVIIFMIIDKSSRGGGGPGNLLWM
                     LVDDRHHYHNNHSSHSSSSSSFGGGGWSGGGGGGGGASSGW"
     gene            complement(19862..20440)
                     /locus_tag="U1021_000817"
     CDS             complement(19862..20440)
                     /locus_tag="U1021_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003092921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEM4711381.1"
                     /translation="MELVDIRQAIIEDVANREFTNKGIAPLFQAPSTAKILIIGQAPG
                     LKTQEKGRLFDDASGDNLRKWLGVDRQTFYESGHFAILPMDFYYPGKGKSGDLPPRKD
                     FAPKWHPLILDQLPELELTILVGNYAQTYYLEKSQRNLTKRVKHADDYLPTYFPLPHP
                     SPRNNIWQAKNPWFQAEIIPNLQNILMKILEK"
     gene            complement(20427..20885)
                     /locus_tag="U1021_000818"
     CDS             complement(20427..20885)
                     /locus_tag="U1021_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4711382.1"
                     /translation="MKLKELCFSDMEMVKQLFLSVFSQEPWNDDWSDEEQLDRYIGDL
                     LAHPRALCFGLFDQEKLIGLSLGYIRYWYEGTEYRIEEFCMSRDYQGQGHGASFLADI
                     EKQLAERKIVHILLQTERTLPAYSFYKKCGFRALEEDVTMVKKVGHHGTC"
BASE COUNT         5663 a         4745 c         4070 g         6447 t
ORIGIN      
        1 acttcttcag ctttggttgc tgcgtcaatg gctttttctg ccttagcaac ttcatcatct
       61 acggctttct tagctgctgc tttttcttct ggtgtcaagt ttgcgttttc gtcgatagct
      121 ttcttagcat cgtccgctgc cgctttaagt tcttctttag cgactgcttt ctcacctacg
      181 agtgtagctg tgtctactgc atcggctgtt gctgccttgt cgattgcttc gttagctttc
      241 gctacttcat catctacagc tgccttagcg gttgctttct cgtcgtctgt caagttgctg
      301 ttagcatcga tagctttctt agcatcgtct gcggctgcct tgatttcttc tttagcgatt
      361 gctttctcac ctacaagagt tgctgcatca acttcatcag ctgttttcgc tgctacaacg
      421 gcttccttag cttttgccaa ttcagcatcg actgcatcct tagcagcttg cttctggtcg
      481 tctgtcaagt gagtgttggc atcgatggct ttcttagcat cgtcggctgc tgcttcaagt
      541 tctgcagtag cgaatgcttt ttcacctaca agcgttgcgt tgtcgatagc atccgctgtg
      601 gttgctttat cgattgcttt ttcagccttg ctcaattcaa cgtagacatc tgctttcgct
      661 tttgctttct catcgtctgt caagttagca ttttcatcga tagcttgcaa tgcatcttct
      721 gcagcggctt tgacttctgc cttagcaatt gatttttctg ttgcaagagt tgctgcgtcg
      781 atttcttctg ctgtcttagc attgtcaatc tcaaggtttg ttgctgcaac ttctgcatca
      841 atcgctaatt taagagcgtt cttatcagat gcaggcaagt ttgcgttttc gtcgattgct
      901 ttcttagcgt catcggctgc tgccttgatt tctgctttag catttgcttt ttcagcgtca
      961 agtgtcgctg tatctacttc ttttgctgtt tttgcgtttt cgatgttttc aagagtggta
     1021 tttcttgctt cctcaatggc tgcaattgct tcttttttgg cagtatctga caagttgtcg
     1081 ttggccttga tacccgcaat tgcatcagct gcgtcagctt ttacttcttc tttagcaaca
     1141 tcttgagtag catcgaaggt cttgctttga atgtcagctg ctgttgttgc atctgtaata
     1201 gctttttcag ctgtttcagc tgctttggta acagttgctt tgtattcatc tttttcagca
     1261 tctgtcaagt tggtatttgc ttcaatacct ttcacagcat cagctgtagc tgcggctact
     1321 tcttgcttag cgatgtcttt ttgagcaaga actgtttcag cgtcaacagt atctgcatcc
     1381 gttgcagcgt caatcttagt ttctgtatct ttcaacgctt tatcgattgc atctgtgtag
     1441 actttcttct cagcatctgt caggtttgaa ttttgtgcaa tagctgcttt tgcatcgtca
     1501 gctgctgctt ttgcttcaac tttagcaata gatttcaagc catcaagtgc acctttggca
     1561 acttcatcag ccgttgatgc tgtcttaata gcttcttctg ctgcttggcg agctttcttc
     1621 aagtcttcta aggcttgtgt tttagctgct gttgacaagt tgtcagctgc ttcgatcgct
     1681 ttcactgcgt catcgtaagc cgctttaatc tcgatgtttg caaggtcttt tacagctgca
     1741 tcttctaagg tttgaactgc ttctggtgtt gttgcttttt cgatgttcgc aactgcttct
     1801 gctgccttag cttgagctgc aagtttcgct acttctttct caccgtctga caagtttgag
     1861 ttcgcatcga tagctgcttc tacagttgcc aagtctttag caatcttgtt cttagcatcc
     1921 aatttagctg cgtcaagaac atctgcagcg attgctttcg tgccttcttc ttctttttct
     1981 tgaactgctt ctggagtcgt tgctgcatcg attgcgtcgt ttgctttctt agcttcgtct
     2041 gctactgctg ccttagcatc tgcaatttct ttttctgaca agtttggatt tgactcgatc
     2101 gctgcatttg ctgcttctac atctttggca atcttgttct tagcatcttg tttagctgcg
     2161 tcaagaacat ctgcggcgat agctttcgtg cctgcaagag ttgctgcatc tacttcatca
     2221 gctttggttg ctgcgtcgat ggctttttct gctttcgcta cttctgcatc tactgcatct
     2281 ttagctgctt gtttctcagc gtctgtcaag ttgtcgtttg catcgatagc gttcttagca
     2341 tcttctgctg ccgctttaag ttcttcctta gcggctgctt tcttaggact tgtgcttgtg
     2401 tcgattccag caatggctgt tttgccagct tcaagtgctg cgtctacacc tgcattatct
     2461 gttgctgtgt cgatagcttt atctgcttcc tctttagctt tatccaattc tgcttgtttt
     2521 gcgtcttttt cttcagctgt caaacctgaa ttggtaatcg catctttctt agcattgtag
     2581 gctgtttcca agtcttgctt agcaactgct ttcttaggac ttgtagttgt attgattgcg
     2641 ttaatctctg atttgccatc ctcaagagcc ttagttaagt cttcagtagt agtagcatta
     2701 tcaattgcat tattagcttg gtcttttgct tcttgaactt ccgtcagttt ggctgctttc
     2761 tcctcatcag taagggcaga agcattgatt tcagcaacct tctcttttga tgctttatca
     2821 atttcctctt tcgcaagatt tcttgcaggc tctttatctt cattgatgag gtctgatgct
     2881 ggaactgtta cgacagtacc gtcattatag gttacttttg cttcacctgt atcagataca
     2941 gtaatgcttt gaatgaggtt agcgctatct ggatttgcat cgtaaatcgc ttgttttaaa
     3001 ctatccttct cagtctcagt tagtttattg gcatcaaaga cgacagtctt gtctgttgga
     3061 tgggcaaggt agagtgcttt atatgttgta tccgttgtga ttttaccact ctcaggtaac
     3121 acaaccccat cctctgtttg ccaacgcaca aaggtatgtc cctgaagagt aggcgactca
     3181 actttttctt taaacttttt attactaaaa tcaataggat agagattgtt gctcacagct
     3241 accattttag attgttttga gccactgagt tgacctttac cagcatcaaa cgtgataaaa
     3301 atccatttat tttgctcatc tggaccatac tgtgttagat agcctttttt agttccatca
     3361 ccattcacat cttcaacttc aaaaacgacg tttggataca aggttatatt agctacatca
     3421 gtatccttat aattgtcacg tgcaaaagca tttcctggtt tataattata atcatttaca
     3481 gaccaaccaa caaccgtgtc gccttcatct gtttttacag tcggccattg ccaagcaggg
     3541 tcatctaaca atgttcccca tgtcacacca tttttgacaa atacttttac cgaagagcca
     3601 gtttgagtac ctaatgtaaa acctctagta tatttatgtc ctgcaaatgt tacagttacg
     3661 tagccctgag gtgctggttc cgatgcagaa cttgggattt taataatcgc tgtgtatgta
     3721 gactcaatag tcgctttacc attgttaaga gccccttcaa cagccgaatc tgttgttgca
     3781 tcatcaactg cttttatagc attttcctta gctttactca agtcagcttg tttaatagct
     3841 ttttcgtcag ctgtaagtac agaattttca atttctgctt tctcagtatt gtaggcttct
     3901 tcaagagctt ccttagcttt tgtttttata gtactagttg tgctaactgc ttcaatcgct
     3961 gctgtaccat ccgaaatagc cttagttaag tcttcagtag tagtagcttt atcaattgca
     4021 atatcagctc gatcttttgc atcttgaacg tccgctaact tagctgcttt ctcctcatta
     4081 gtaagagttg aggcattgat ggcagcactc ttttccattg catctttttc aatttctgct
     4141 ttggcattgc ttttagcagt agccttgtct tcgttggtga gagttgcgga tggaacttta
     4201 actgcggtat catcattaaa tgttacagta gcttcacctg tatcggatat ctcaatcgct
     4261 ttgatgactt gcggaacccc tgtacttaaa tcagggtttg catcatatat cttttgcttg
     4321 acctgttctt tctcggaatc tgttaacttt gtactatcaa atacagctac ctggttttgt
     4381 ggatgcgcaa gatacagtgc ctcataggtt gtttcagttg tgattgtccc actcttaggt
     4441 aacactaccc catcccgtgt ttgccaacgc acaaaggtat gattagctaa tgtaggactt
     4501 acaaccttac tagtaaattg acggttatca taaccaatac cttggaaata cgcagctaca
     4561 gaacgtgaag tgtattgttt attcttataa gtcattgaac cttttccggc atcaaaggtt
     4621 acaatcaacc atttactttt cccctctgga ctataccaag ctagaaaagc attaacattg
     4681 gcatttagtg gctctacttc ttcaacctca taaccaacta cagggaaaaa ataagtagta
     4741 gtaactggct ggtctttctt tttgttgaaa tcaaaacgat tactatagcc ataaccaatg
     4801 ttccaatcaa taaaaacatc tccatcgtta ggtttcatcg ttggccatcg ccaattgggg
     4861 tcctctatca attgccccca agtagtccct tccttaaccc aaaatctcac ttctaactga
     4921 ataggtctac tattaataga ttgtttagtg gcattcggaa attctcctgg caagttattg
     4981 aacacatatg aaccatattc aggtttttga aatgaaacaa ggacataccc attaggaact
     5041 ggatcacttt ccgatgtcgg aaatttgata atcggttcat ctacagttgg gttagtcgta
     5101 ccatctcctt gtgttccagt atttgctgaa cgtgaggttc ctactggttg gctacttgct
     5161 gaacctgtat cacctgcagg ctggacattc gcagttgagt ttgttgtatt accagtctga
     5221 actcctgagc tattgttccc ttgattatcc gattgctgtt gcgttgttga agttgtgcca
     5281 tcggaagttc cacccccatt gactcctgtt tcagcgccta caatcgttcc tgcaccaaga
     5341 accaaggtcg tacctaacag aacacttgca gcaccaatat gatatttacg gatagagaaa
     5401 cgctggcgcg ctccatacca atcaaatgat ttctttttcg aacgattcat atcgtcactc
     5461 cttttgaata aatattacca gagaaaaaag aagcgttcaa aaaatcagtt ttccctagtt
     5521 tcaagtcacc aagactctga gttaattata cctcaccccc cccccgattt tcaagtattt
     5581 tagtacattc tttgtaccgc acgttgtaaa gtcaagtgca acaagttcat tgatgactag
     5641 agttctagaa tccaagaaga aggtatctat ttcgacatca cgataaaagc aaaattacat
     5701 gaactccttt atctgctttt taaacatcgc catgtagaca gacactatac tgatgatacc
     5761 gaccaaaaat tccaaaagct caaggaattg ttccgattat cattcacaaa ttaattgcaa
     5821 ctcactttag agattagtaa ttttaatact catttaaaat caaaagtagc tatctactaa
     5881 tcaaattgta tatagagaat ttcaattttg aagttgtcga aaagagaatg gctagtcaaa
     5941 atctatgatt tccaatctga gcttagatat tgaaatttta cacatagaaa ttgacctcaa
     6001 tatgctattt ttgattttta atgagtatta gatatgtcct gtttttaatt cactcgacta
     6061 tccaatccac ggattttcat aatatttttt cttttatcct ttcaaacgtt gatttcatgc
     6121 agtttctagc accttgtatt tagttgattt tgtaatttgt tcaccttttt gttcacccta
     6181 aagactattc atggcttttt cgtaatataa aaccgcttct ttttccttgt ctttggatag
     6241 gtgaccatat gtatctaaag tcatagcgat attggaatga ccgatcctat attgtaattc
     6301 cttataagtg ataccagcgt tcaacagtaa actagcgtgg gtatggcgga atgcgtgaca
     6361 agtaaaacga ggaataccca aagccttaca ccgacaattt ataacttctt gtagtgaaac
     6421 ccgtgggagg tattccctta aagttgtcgc aaagacaaca ccaggagcac acgcgccaac
     6481 ctcaagaaac atcaagcgtt gacgattttg atattgtttc agcaagagaa ctgttttttt
     6541 gtctatgctg ataatacggg tacccgcctt tgtctttgtt gtcccgataa tgtgtagttc
     6601 catgctatag gttttactga ttgatattgt accagcttct aggtcaatat cagacaattc
     6661 aagggcagac aattcaccaa tacgacaacc agtggcaagt aataacttaa aaataacata
     6721 ttggtaatac ttggtaaagt tcctacttgc taattgttca gcataatcga gaaactgttt
     6781 taagtgttca ggttcgataa acctgaccgc ctgacgaccc gaagcacgca agaagataga
     6841 ttactgaacg ctatcgcagt aagtcaggaa gtggatgaaa tagagcgagc tatctcaaac
     6901 ttggataagt tacacagtga catacttaca gagaagtata tcaagcgtca gaaaacaggt
     6961 ttggcactct atgaaagttt ttacatggga aagtctatgt tttacgaagc attacaaaca
     7021 gctttgttag actttgcttg tatatttaag aatggggaac tattgcagta taaagacgga
     7081 cagggctaat attcgcaaaa tacccccaat tttttaatcg ggggtgggtt tgttcgtgat
     7141 tccacaacgc cggccctttc cgtgcacaat tttccctttt tgaagttttt aagataaaag
     7201 aatttgacaa atgcgcataa tgtgtatata ataaataatg taaggaggta gagcgctatg
     7261 ccacttactg gaaaagaaat ggcaaaactt gcagaggcta acgggtggaa agaaatccga
     7321 gtcaatggaa gtcaccacca tttcaaaaaa gaaggatttt caaaaatagt cacaatccca
     7381 gttcatggaa acaaggactt gggcaaaggg ctagaaaaga aaatcctgag agatttgggg
     7441 ctactttgaa atgcccctcc tttttcgctt ttggaggtag aaacatgtta aaatcttacc
     7501 cagctatttt tcataaagat gaacaaggtt attgggtgga gttcccagag tttagtggtg
     7561 gtactcaagg ggataacctt gaggaagcta tgtacaatgc ccgtgatttt ttagaaagct
     7621 ctattgccct ttatattgat gaggggatgg agttaccaaa agtaagcgat ataaaggagt
     7681 taagcgctcc tgatggcttt gtttcaatga tacaagctga tccaacaccg tatattaaga
     7741 ataataaagc aattagaaag aatgtgacag tgcctgaatg gttaacaaaa ttggcagacc
     7801 gtgagggttt gaactattcg gaaattttaa caacggcttt agaaacacga ttacaagtgt
     7861 aaacatgata taatacactt accagcaatc aaaaaaagcg catcaattcg atacgctagt
     7921 tacttgcctg ctaaactcat aaaatttttg aggttatcgc cctttgataa cctttttttc
     7981 attgtaaaat ttgttcacct ttttgttcac cctgaggggg aacataagga aatataaaga
     8041 gatacgattt tttaaaaaac cagtaaaatc acgagtttgg gagttataac actctcaaac
     8101 gttagtcaaa tttcaattcc acaacaactc atactttcaa agtcagaaca caaaaaatga
     8161 ccccgcaagg tcatttttag tttctatttc gcttccaaat gccaaatatc ttcattgtac
     8221 tgttgaatcg tacggtctga cgagaagaaa ccagccttgg caatgttgac gatgactttt
     8281 tccaaccagc tgtcgcgatc ttcgtagtct gctaacatct gctctttagt cgagatataa
     8341 tcttccaagt caagcaaggt catgaagtgg tcattgtgct taaggttgtc ctgtaagcgc
     8401 cagagacgtt catcgatacc accagcatga cgaatggtgt cagaagtgat gaaatcaatc
     8461 aatggacgga tggcttcacg ttcgtagaag gaatatggat ggtaagttcc atttgcatag
     8521 tggtcgataa cagtctggct atcttgaccg aagatgtaga tattttcatc gccgaccaat
     8581 tcatgaattt ccacgttggc accgtcatct gtaccaatag tcaaggcgcc gttgagcatg
     8641 aatttcatgt taccagtacc agaagcttct ttagatgcaa gggaaatttg ctctgaaatg
     8701 tctgccgctg gaatgatgaa gctggcttcc gttacgttat agttttcaat catgaccaac
     8761 tgcaaatgtg gtgccacatc aggatcattt ttaatcacct gtgacaatac caaaatcaga
     8821 tgaatgatgt cttgtgccgt agtgtaagct ggtgccgctt ttccaccaaa gaagacagtc
     8881 aatggacgcg cggggatatt cccagccttg atgtccaaat acttgtgaat gacataaaga
     8941 acattcattt gttgacgctt gtactcgtgc attcgcttga tttgcacgtc aaagatggac
     9001 tctggattaa cttcaacacc ttgagtttta gcaatatgac gttgtaattt acgcttgttg
     9061 tgttgcttgt ttttttccaa ccaagatttc agttccttat cattcttgta ttctaaaagt
     9121 ttttccaact cgctagcatc gtgatgatag ccatgtccaa gtaggccgtc caggtagctt
     9181 gccaaacttg gattagcatg catgagccag cgacggaagg taatcccatt tgtcttatta
     9241 ttgaattttt caggaaatag ctcatagaaa gctttcaact ctgaagtttt caagatctct
     9301 gtatgaagtg ccgccacccc attgatagaa taaccataat gaatatccat gtgtgccatg
     9361 tgaacacggc catgttcatc gatgatattg acagcaggat catccttcac ttctttggca
     9421 cgacgatcca attctacgat gaacggtacc aagtgcggaa ccacacgatt caagaaatca
     9481 agcggccatt tttccagcgc ctctgacaag atggtatggt tggtataagc agtcattttc
     9541 ttaacaattt caactgcctc atcaaacgaa ataccacgga gctccaaaag tcgaatcaat
     9601 tctggaataa caagtgatgg atgggtatcg ttgatttgaa caacggcata atcaggtagg
     9661 tcatgtaagt ttgatccctt agcaaccgct tcgtcaatca atagttgcgc agcgttagac
     9721 accataaaat actgctggaa gatgcggaga acttttcctt catcggtcga atcatctgga
     9781 tagaggaaga gagtcaagtt tcggaaaata tcttccttat caaactcgat tccatcatag
     9841 atgatattgt catccacaga accaagatca aacaaacgca agcgattctt gcgttccatt
     9901 ttataaccag gcacatcgat atcgtacaac ttagatgtca aagtaaagtt agcgaaaggt
     9961 acttggtaag aaattggtga ctcagtcaac catgaacgtg gtgtaatcca ctcgtttggc
    10021 acagctgact gctgatggta ttcgaataat tgtctaaaca gtccaaagtg ataattcaag
    10081 ccgaccccat caccgttaag acctagacta gcgatggaat caaggaagca ggctgccaaa
    10141 cgccccaaac caccgttacc aagagatggc tccaactcaa catcttcact agcaatcaaa
    10201 tccttgcctg cagcagctaa ctggcttttc acctcgtcat aaagaccaag gttaattaaa
    10261 ttattagaca agagcttacc aattaagaac tctgctgaaa tatagtaaac ctttttcttc
    10321 tggtcattag tatatttggc ttcactttgc tgttttgtaa aagcaagtaa ggcgtagtag
    10381 agctcttggt ctgtacaatc ctcaatacgt ttagcataca tggattgaac aaaattttgt
    10441 aaatttatca taaggtttct cctggatatt aatgtaatca ttcagaaaga tttcgttctt
    10501 tctttgtaac cgttttcttg attataccct atttataaaa aaaagacaag ctattataca
    10561 aaattgcata aatagtttgc ctattttttt attctgcaat cagagtttcc aaaccaacct
    10621 tcatcatatc cgtgaaagta ttttgacgct cttctgctgt ggtgtcttcc tctggattaa
    10681 ccaagctatc cgagatagtc atgatagcca gcgtttgaac gccaaactta gcacctaggt
    10741 aataaagtgc agctgcttcc atttcgactg ccttgacacc tagttgacct aattctaagt
    10801 tgcgactaaa caattttgga gaatagaaac tatctgatga taaaacattg ccaacatgag
    10861 tggtcagatt gagttctttg gagatatgat aagccttatc taaaagatca aaatcagcga
    10921 tttgtggcaa atcgtactct ggccagtcaa tattgatcat gcgagaatta gttgctgcag
    10981 cctgagccaa gaccaactca cggacatgaa catccttgtt gagcgaaccg gcagttccta
    11041 cacggattag ctttttcaca ccgtagtcat tgataagctc atgggcgtag atagagatgg
    11101 atggcattcc catacctgtt cccatgacag atacgcgatg acctttgtaa gtacctgtgt
    11161 agccgaacat attgcggact tcgttgaagc aaacggcatc ttcaaggaag ttttcagcga
    11221 taaatttagc acgaagcgga tcaccaggaa gcaaaatctt atcagcgatt tcacctggtt
    11281 ttgcggaaat atgaatagac atgtaatgta cctctttgtt ctattttcga atgcttacaa
    11341 ctcagccaag atagctttca ccaagccctt gaagttgccc ttgatttgct cggttacttc
    11401 tacaacttct tcgtgattga gttcagattg gaaaccagcc gcaaagtttg tgatagcaga
    11461 gatacccaaa actttcatgc ctgagtgagc tgccacgata acttctggta ctgttgacat
    11521 accgactgcg tgggccccca tggtcttgaa ggccaagatt tcagcaggtg tttcataggt
    11581 agggcctgtc acaccgagat agacaccatc gtccaacttg atacccaatt tttccgcaat
    11641 ggcatgggct ttttcacggt attcttttgt ataggcattt gacatgtctg ggaaacgtgg
    11701 accaaattct tccaagtttt cgccaatcaa tggattttgg ccagtcatgt tgatgtggtc
    11761 tgtaatggcc atgagagtac ctggaccgta accgatacca cctgcggcat tagtaacaat
    11821 cacgccttca caaccaagag ctttcatgac acggactggg aaagtcacaa cttccatcgg
    11881 atttccttcg tagaagtgga atcgaccttg aagagccaag accttacgtc ctgccaaatc
    11941 accgtacacc aacttaccag catgacctac aactgttgac ttgccccagt ttggaatatc
    12001 tgcatagtca atgacaatgg cattttcaac ctcttgagcc aattcaccca agccagaacc
    12061 caaaatcaaa ccaaattctg gcttaatcat tcctttttct tctaagaagg tttttgtttc
    12121 attgattttt gcaagtaaac tcatattttc tccttttata aataatccga ccagtcatat
    12181 tctggcattt tttctttaat gatttcaagt ggacgacaga ggaaggctgt ctgctctctc
    12241 tcgataatgg ggcgattgag agtagcaggc tctttaacta aacgctcaaa gatttcttct
    12301 tcagacaatt ctgctcgttc ctcttccgtc aaccgaataa ctgccgatgg ctgactgtcc
    12361 atttttttca aaagagctgt caattcagct ccccttaatg gcgtttccaa ataattaacc
    12421 cacttgactt ccataccctg actggacagc aatattctta attttttaca cttgctacag
    12481 tcaggattga tatagaccgt tagcttctcc attaaactag tttctccaag aagctttcac
    12541 caatcatggc tttttcgaca ccgaagtttt cagcaatggt agctgagatg tccgcaaaat
    12601 ggcctactgg caagacaccg ctacctttga aagccttgct gtatgctaag agtggcacat
    12661 attcgcgtgt gtgatctgtt ccagcatagg atggatcatt gccgtggtca gctgtaatca
    12721 agagcaaatc atcttcacgc atattgtcaa taatctctgg aatacgtgca tcaaactctt
    12781 gcaaacaatc gcggtagcct tcgatattgc gacggtgacc atacacagca tcaaagtcaa
    12841 ctaagtttgt gaaggagaaa ccttcctcga agtctgataa cttcagagta tcaatcaaca
    12901 catcgacacc gtgcatgttg gacttggtgt gacccatatc atttgtaata cctgaaccat
    12961 tgaaaatatc actgatttta ccaattgagt aagttggtac acccgcatct gctagtttgt
    13021 tgagtactgt ttcttcaaac ggtgatactg catagtcgtg acggttggca gttcgtgaga
    13081 aattgcctgg ctcaccaacg tatggacggg caataatccg accaagaaga gctggacgtt
    13141 caagggtaat ggaacgagca tattcacaga tacgatacaa ttcgtccaag ggaataatgt
    13201 cttcatgggc tgcaatctga aggacagggt ctgcggaggt atatacgatc aactccccag
    13261 tttccatttg gcgaggacca aagtcatcaa taacagctgt accagagtac ggcttgtttg
    13321 cctcgcggat gattttacgg cctgagaatt cttcgatttt tgtcaaaatc tcttcaggga
    13381 aaccatccca gaatgtatca aatggctcag taatattgag gcccatgatt tcccagtggc
    13441 ctgtcatggt gtcttttccg agcgacactt cttccagctt ggtcacgtag ccagttggat
    13501 gactttcagc aggaaccgtc gcaagagctg tgtcacgagg gatgttccca agaccaatct
    13561 tggtcatatt aggcacctca agcccagctt tttcagaaat gtggccgaga gtgtcagatt
    13621 ctgtatctgc tacacccgca ttgaaaaatt tatctgagtc tggtgctgcg ccgattccga
    13681 cagagtccat aactaccaag tgaacacgtt taaatttagg cataattgtc tcctttattt
    13741 gaatagttag attcaaccaa aatcaacgtc cacccaagtt gctagactgg aaattatcgt
    13801 caccacacct aaacatttta atggggtgca atactataca gtcaaagctc tcggcatcaa
    13861 acttcctaac catcaaaact agatactgtt actcgcttca ctgcctgctg ttcagctatc
    13921 gctttttcag tacctatcat ctgactgcta cgaggtaagg ggatagattt ttgaagagtc
    13981 taaacgttcg tgttttcatt ataccataaa aaagcttctc attgtaccaa aatgagaagc
    14041 ggtttcaatt tatttctttt cgatgaggtt cggtccttct ggtgtaccga caattacctt
    14101 agaaatcaag ccaataaaga gaccgtgttc aacgacaccg acggtccgat ccaattcttc
    14161 cgccaatgca tatgtgtctt ctattctgcg caaatcaagg tcaatgataa agttctgcat
    14221 atccgtgata tgtttttctc cattacgcat acgaaaactt ggacgatacc cttttttctc
    14281 aaatagtcgg aaaagatttt ccgcaccgta ctgcacgact tccactggca acttgaaggt
    14341 acctagggtt tgaaccacct tagactcatc cacaatccag atacagtcct tgctattaac
    14401 tgctaccact ttctccatga gaagcgctgc gccaccgcct ttaatcccat tgaagtcccc
    14461 atccacctca tcggctccat ccaccgtcaa gtccacatat tcgacttcgt cgatattttt
    14521 taggggaatc ccaagggacg cagcatgttc tgccgtagca tgagaggtcg ttacgcctgt
    14581 gatctgtagc ccttcttctg caacccggcg gccaatctcc tgcacgaaat agtaggcagt
    14641 cgaaccagtt cccagcccaa caatcatccc gtcggtcaca aactccgccg ccttaatccc
    14701 aacctgctct ttaagatttg tcatctttgt ctcctttgaa gtcattcatg aaataattat
    14761 accacagcta agacagcagt tcaaaataac aactcaaact tcagacagca aagactacaa
    14821 tatgtgcata gtgactaatg ctgaaattat ttttcaatca taagacttgg gaaaaaggag
    14881 tcaatatcat gttttatctg gtcaagatta tcaatccttt ttaccataat attctcctac
    14941 attacaattt acgtaactct tccctaacct catccttgct taccgcctca ttaaagaacg
    15001 gcaatccgac aatacgatag cggtcatcat caaccagtgt tctcacccca tctcgttcag
    15061 aaatttgata cccttcggtt ttcttaaatt tttatgtttc tattataaca tagttaacct
    15121 aaattaatag caacactttt tgtatttcta tcaaattatc ttctcaaatt aattactata
    15181 tttattgccc tctcaataca tttctgcact cctcatccct catctgtgct ttttttatca
    15241 ttccatgtta aacttataag taagatttaa acctgtattc acagttcagc acttccatct
    15301 aaggctagtt tatcagctat tcatcgttag tttttttgga gtgagaaaga actcaattgg
    15361 tcaccaaaag agttcccctc acttccaata cagtagcttc ggcctctatg gtcactttct
    15421 agttttaagg tgaccagctg aaacagttcc ccaaactgtt tcactccatc ggactatttt
    15481 actcccaccc ccgcacagct ccaaaggttt ggggaacctt tggaggtcgg agatagagcg
    15541 aacagagttc gctacaaaac agtcagagta gtgactgttg gaggttggag atatagcgaa
    15601 caaagttcgc aacagtcgta gatgtcagat ttggaatgtg aaacacgaac tgcggagatt
    15661 tgttgtacac acctttaaca gtccactgcg ctgagatgtt gacacgaacc ctgagaagtg
    15721 gggctgggct tgagcccatc cccaaaaaaa ctgccttgat tagcgacaaa ctatctcttt
    15781 tctaaaagca ctttacttgt aaatacagat tctagttaga aagcacatta ttatgatcac
    15841 caaagaattc gatacaataa ccgctatttc aactcctctc ggtgaggggg ccattgggat
    15901 tgtccgcctg tctgggacgg atgcttttgc cattgccagc aaggttttca aaggaaaaga
    15961 ccttgcgact gtacccagtc acagcctcaa ctacggtcat atcatcgacc ctgcgacggg
    16021 tcaagtgctg gacgaggtta tgatcggagc catgcgttcc ccaaagacct tcacgcgcga
    16081 agatgtcatt gagattaata cccacggagg catcgccgtt accaacgaaa tcctccagct
    16141 cctgattcgc caaggggctc gaatggctga gccgggcgag tttaccaagc gtgcctttct
    16201 caacggtcgt gtggatttga ctcaggccga ggccgtcatg gatgtcatcc gtgccaagac
    16261 cgacaaggcc atgcacaatg ccgtccgcca gcttgacggc tccctctccc agctcatcaa
    16321 cgacacgcgc caagagattc tcaatacgct ggcacaggtc gaggtcaaca tcgactaccc
    16381 tgagtatgac gacgtcgagg aagcgacgac agagctggtc cgtgagaaga ccctccagtt
    16441 ccaaaccctg ttggaaaatc tccttcgtac cgcccgccgt ggtaaaatct tgcgtgaagg
    16501 catcgcaacc gccattattg gtcgtcccaa tgtgggaaaa tccagcctgc tcaataatct
    16561 tctccgcgag gaaaaagcca tcgttacaga catcgctgga acaacccgcg acgttatcga
    16621 agaatacgtc aacatcaaag gcgtccccct caagctgatt gatacagcag gtatccgcga
    16681 aactgacgac atcgttgaaa aaatcggtgt ggaacgatct aaaaaagccc ttgaggaggc
    16741 cgacctcatc ctactagtcc tcaacgcatc cgagccactg accgagcaag atcgtaacct
    16801 cctagctatt tctgatatgg caaaccgtat cgtcctgctc aacaagaccg acctggaaga
    16861 gaagattgaa gcagaccagc tgcctgagga tgtcatccgc atttctgtct tgaaaaacca
    16921 aaacatcgac caaatcgaag aaaaaatcaa ccagctcttc tttaaaaatg ctggtctggt
    16981 agagcaagat gccacctacc tctccaattc ccgtcatatt tccctgattg agcaagccgt
    17041 ccaaagccta caagctgtca acgatgggct ggaaatgggt atgcccgttg acttattaca
    17101 ggttgacctg acccgctgtt ggcaaatttt gggggaaata acaggggatg ctgctccaga
    17161 tgaactcatt acccaactct ttagccaatt ctgtcttgga aaatagtatc acatatcatg
    17221 caagaaaatt tgcatgattt ttattatatt aacacaaaaa tatttgatta tctttaccat
    17281 ttaagatata ctaaactata gagaggaggt ctttccatga aaaaaatcat catctgtatt
    17341 gcacttctat cctgtcttgt ctttccattt atcggatgga aactctacgc ctaccagcac
    17401 aacaaaataa gtttgactga gaatgcagat ttctacttgg tttatcccgg taaggtcgaa
    17461 gcctttcagc taaatggtca agaaccagag ctgcttcata ctcaaaaaat gaattcagaa
    17521 ggctattttg gctctggtga aaattatgtc atagacaatc ggtatctagt ctttgccaac
    17581 gatcagcaaa aattcattaa cgacaatctg atatccatcg atttcaatac tggcactgtc
    17641 ttgcgaaagc caagtcagta tagtagctat atcagtggta cagatggaaa ccatttctat
    17701 acagcaggtg cttatcatat gcttgcgcaa tttgataagc aatttgaagc cattcaaacg
    17761 cttgtcctca atgatgactt catcctacat gccccagtct atgtggatga tacttctgta
    17821 tatttgacag gggtggttag agaattgaac caagacggga cagaagaaaa tgtcttgatt
    17881 gtatttgata agaaagattt ttcgaaacaa gaaatattca agtacgacaa tagcattgca
    17941 acaggcgatg gactgttggt caatggaacc atctatctca ctatttttgg caagagagct
    18001 ccagaatacg aagatgggca agttcctaat gaactcctga ccttcgatac acgttccaaa
    18061 acattttcat ccatcaagct ggaacacccc tcaccaagca cactacatgc tctcaaagac
    18121 gaaaaccttc ttctcatcga gcatcaaaat ggcatgttta gcccactttc ctttactatt
    18181 tacaataccc aaactggcga gcaatcctac catactttga aggacttaaa tccccgtcct
    18241 cactacatcg accatatccg tcaaatcgat gacaagcgct taatgataat tttggcaaat
    18301 caactcctca tttatgatat ggaggctaag agcattacca gccagaccac tctgtcagaa
    18361 gactatgttt ctggagtttg gattaatcca taaaataaat aactcggcta agtgagccga
    18421 gttctttatt cttcatcttg taaatccaca cttggcacgg ttgtcgccgc atcagtacta
    18481 gcttggaaca ggtcgacttt ttcatagcca aataggttgg cgtagaggga agtcgggaac
    18541 cgtttgattt ttttattata ggcagttgct accgcattat aatccttgcg ggcaaccaaa
    18601 atccgatttt cagtcccctc tagctcggta atgaggtcag atacctgttg attggctgtt
    18661 aattgcggat aattttccgt caccatcagc aaacgtgaca ctgccgaatc cagctgactt
    18721 tgtgcctgat tgtagtcgct ggttcctact tggctagatc cgattttcgc acgcgcatcc
    18781 gcaatggctg tgaaaatctc ttcctcatgc tccatagctc ccttgactgc tgccacgaca
    18841 ttcggaatca ggtcatagcg ccgttgaagc tgggtatcca cattggcctg ggcattttcc
    18901 acttctgcat ggctatcaac cagtccattg tattgaccga ttgcccccat tcctaaaaat
    18961 agcagagcga aaactgggat tagtatggct aaccatttct ttttcataaa cattttcctt
    19021 tcttaccaac cagatgaggc tccgccaccg ccaccaccgc cgccagacca gccccctcca
    19081 ccgaatgatg aagaagatga agaatgggaa gaatgattgt tgtggtaatg atggcggtca
    19141 tctaccagca tccagagcag attgcctgga cctccgccac cacggctgga tttatcaata
    19201 atcataaaga taatgacaac gagaatgaca atcataaacc agacaaaact atcactttcc
    19261 gcactggtcc tttcttccat ggctgccagt tgttcctgac ccagactagt cccgtagaag
    19321 cgatctccga tggattggac aatgtaggtc actccgccat catagtcttc ctgacggaaa
    19381 aactccctag cattttccag aatatccttg gcttccacat ctgtcaacac cgtggcagca
    19441 ttgtcggagg tctctatccg aaactccctg tcggctatgg caatcaccaa gagaataccg
    19501 ttgtccgttc ctgcaaaacc aacctgccag tcacggaaag ttgcgttgga tagactttca
    19561 atatcccttg aaagactttc ggtcacatag accccaacct gtaactgctg ctcacttgcc
    19621 gcccaggtct gattgagttg gtcaatgttg gcaatggttt cactagaaag aagctgggtt
    19681 tcatcaacca cagtcgtatc aattggacgg gctggaattc cctcagctcc taccagacta
    19741 ggctgaccta ggctgaacaa taaaagcaag aaacccaata aataatacaa atactttttc
    19801 atacggcacc tcctcaaaaa gaagaaaacg cattctttta tattattgta ccatatttac
    19861 cttatttttc aagtattttc ataagtatat tttgtaaatt tggaatgatt tccgcttgaa
    19921 accagggatt ctttgcctgc cagatattgt ttctaggtga tggatggggc aaaggaaaat
    19981 aagtgggaag gtaatcatct gcatgtttca ctctcttcgt caggttcctt tgggattttt
    20041 ccaaataata agtttgagca taattgccta ccaatatggt cagctcaagc tctggtagtt
    20101 ggtccagaat aagtggatgc catttgggcg caaaatcctt acgaggcggc aaatccccag
    20161 acttcccttt tcctggataa tagaaatcca taggaagaat agcaaaatga cccgattcat
    20221 aaaatgtctg acgatccacg cccaaccatt tacgaagatt gtctccactg gcatcgtcaa
    20281 ataaacgccc tttttcctgg gttttcaagc caggtgcctg tccaataatg agaatttttg
    20341 cggtcgaagg tgcttggaaa aggggagcta ttcccttgtt tgtaaactct cggttagcaa
    20401 catcctcaat gatggcttga cgaatatcaa caagttccat gatgtcctac tttcttaacc
    20461 atggtcacat cttcttctaa ggctcggaaa ccgcattttt tgtagaaaga ataggctgga
    20521 agagtacgtt cggtttgcag gagaatatgc acaatctttc tctcagctaa ctgcttctca
    20581 atgtcagcta aaaaactagc accatgtcct tgcccttggt aatcacggga catgcagaac
    20641 tcttcaattc ggtattcggt cccctcatac caatagcgga tgtaaccaag tgacagacct
    20701 atcaattttt cttgatcaaa caagccaaaa cagagtgctc ttggatgtgc cagtaaatcg
    20761 cctatgtagc ggtctaattg ttcctcatct gaccaatcat cattccaagg ttcttggctg
    20821 aagacagaca agaagagctg tttaaccatt tccatgtctg aaaaacaaag ttctttcagt
    20881 ttcatatttc ctcctaaaaa gggagtggga aagaactcga ctagt
//
LOCUS       DASFQD010000029        20896 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.029, whole genome shotgun sequence.
ACCESSION   DASFQD010000029 DASFQD010000000
VERSION     DASFQD010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 20896)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20896)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20896
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.029"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            999..1298
                     /locus_tag="U1021_000819"
     CDS             999..1298
                     /locus_tag="U1021_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein"
                     /protein_id="HEM4711383.1"
                     /translation="MLNAKDLRKLKRSELFELLVEQAKEIESYQAKLVDLEKRIEYRE
                     VVLGEIGSIVEASLAVTRIFEEAQLAANIYLEQVQKVTHKQSDNCEIGRIDEDGD"
     gene            1288..1890
                     /gene="lepB"
                     /locus_tag="U1021_000820"
     CDS             1288..1890
                     /gene="lepB"
                     /locus_tag="U1021_000820"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEM4711384.1"
                     /translation="MVTNKNKDYVTISDLPSISIMSEELDKIRYKERYLETLKNTIFT
                     LVTVAALAVLIAMLWLLVLHIYGSSMSPTLEAGDMVATVKTNTLSTGDMVAFYYNNKV
                     LVKRVVATSGQWVNIDEQGNVYVNGKTLDEPYVKDKAYGQTDIKLPYQVPEGQYFVMG
                     DHRSVSIDSRNTAIGSIGEEQLVGKLTFRIWPFHKMGVIK"
     gene            1915..2295
                     /locus_tag="U1021_000821"
                     /pseudo
     CDS             1915..2295
                     /locus_tag="U1021_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922052.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2296..2685)
                     /locus_tag="U1021_000822"
                     /pseudo
     CDS             complement(2296..2685)
                     /locus_tag="U1021_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558050.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            2653..3444
                     /locus_tag="U1021_000823"
     CDS             2653..3444
                     /locus_tag="U1021_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018363760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class C sortase"
                     /protein_id="HEM4711385.1"
                     /translation="MASQIRHDLSLLVFFLITGLLLLLYPTVSDYWNSHYQSEAVATY
                     SEKLLDISKEEKQKILENVSAYNNMLEKGTIPNLNIDSVALKKYDSILNITDTGIMGY
                     VEIPKLQTTLPIYHGTDDAVLQVAVGHAAISGHRGLPSAKLFSDSDQLVIGDTFMIQV
                     LDNTLTYEIDKIITVTPDDVSPLMIDPNEDFVTLVTCTPYGVNSHRLLVRGHRIENQL
                     LTKQVVSEGSIVKPILVSPFIALCLLGLLWSLFFYKKRSKFVYVT"
     gene            3570..3746
                     /locus_tag="U1021_000824"
                     /pseudo
     CDS             3570..3746
                     /locus_tag="U1021_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003104139.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
     gene            3846..4256
                     /locus_tag="U1021_000825"
     CDS             3846..4256
                     /locus_tag="U1021_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM4711386.1"
                     /translation="MNIKEVSDVTGLSADTIRYYERIGLIPKIARKSSGVRNFSESDV
                     AILEFIRCFRSAGMSIERLIEYMGLVQAGDSTVEARIDLLKEEQEELRSRLSEIQQAL
                     DRLDYKIENYQTILRGAENQLFTDGSGSCKKDRE"
     gene            complement(4279..4593)
                     /locus_tag="U1021_000826"
     CDS             complement(4279..4593)
                     /locus_tag="U1021_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3270 domain-containing protein"
                     /protein_id="HEM4711387.1"
                     /translation="MALRHYQSHEYQYEEYIPKEKKANFQTYQAKNANKERLKELLFF
                     VNIAFFSLITVIASYVYLSVGIPVFIAIILASATGFLGLRLVQIGLKKKFKPKQVIRK
                     NE"
     gene            4754..5683
                     /locus_tag="U1021_000827"
     CDS             4754..5683
                     /locus_tag="U1021_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012997850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HEM4711388.1"
                     /translation="MEKIIITATAESIEQVKELLAAGVDRIYVGEEDHALRIPTNFTY
                     DELREIAELVHSAGKELTVAANALMHQDMMDNIKPFMELMREIKVDYLVVGDTGIFYI
                     NKRDGYNFKLIYDTSVFVTSSRQINFWKDHGAVEAVLAREIPSEELFDIAKNLEMPAE
                     ILVYGASVIHHSKRTLLQNYYNFTKADETDLSRGRGLFLAEPSDPDSHYSIFEDKHGT
                     HIFINNDIDMMTKLSELDEHGYHNWKLDGIYCPGQNFVEIVKLFVQARDLIEKGDFTY
                     DQAFLLDEQVRKLHPAERGLDTGFYEFDRNKVK"
     gene            5801..7087
                     /locus_tag="U1021_000828"
     CDS             5801..7087
                     /locus_tag="U1021_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HEM4711389.1"
                     /translation="MSKTLKRPEVLSPAGTLEKLKVAIDYGADAVFVGGQAYGLRSRA
                     GNFTMDEMREGIEYAHARGAKVYVAANMVTHEGNEEGAGAWFRELRDMGLDAVIVSDP
                     ALIVICATEAPGLEIHLSTQASSTNYETFEFWKELGLTRVVLAREVTMEEVAEIRKRT
                     DVEIEAFVHGAMCISYSGRCVLSNHMSKRDANRGGCSQSCRWKYNLYDLPFGEERRSI
                     KGEIPEEFSMSAVDMCMIDHIPDMIENGVDSLKIEGRMKSVHYVSTVTNCYKAAVDAY
                     LESPEKFEAIKQDLIDEMWKVAQRELATGFYYSPPSENEQLFGARRKIPEYKFIAEVV
                     AFDKETMTATIRQRNVINEGDQVEFYGPGFRHFETTIQDMHDSNGEKIDRANKPMELL
                     TIKLDREIYPGDMIRACKSGLINLYQEDGQSLTIRA"
     gene            complement(7301..7624)
                     /locus_tag="U1021_000829"
     CDS             complement(7301..7624)
                     /locus_tag="U1021_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711390.1"
                     /translation="MKRFLAVIFEQITVFLEHGKAPKSIEPDSKEDIKNNLELALYKK
                     AAVHVIYGDRSFTGDIVKYDTDRQRIIMKNFKRQVTSIIKIEDIKKVTLVPDSIKTSQ
                     QQTKC"
     gene            7716..7931
                     /locus_tag="U1021_000830"
     CDS             7716..7931
                     /locus_tag="U1021_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018167072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbC family protein"
                     /protein_id="HEM4711391.1"
                     /translation="MAEFTFEIEEKLLVLSENDKGWTKELNRVSFNGAPAKYDIRTWS
                     PDHTKMGKGITLSNEEFQVLLDAFANK"
     gene            complement(7943..8482)
                     /locus_tag="U1021_000831"
     CDS             complement(7943..8482)
                     /locus_tag="U1021_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018167073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HEM4711392.1"
                     /translation="MTNHSTKSLVYIAIGTAIIAALSQISLSIGPVPFTLQTLAIGLV
                     ACLYKPKEALASVALYLTLGAIGLPVFAGFSGGFAALMGPTAGFLWGFLVYAAITSVL
                     TKSTSSPVTVFLACLLGTASCFLLGCLVFKLVSGASWSDTLAWTVLPFILPDLVKIAI
                     VTLCHRLLQPITKKEAFFA"
     gene            8668..9405
                     /locus_tag="U1021_000832"
     CDS             8668..9405
                     /locus_tag="U1021_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014713635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEM4711393.1"
                     /translation="MSELLEIYRTLKSKTWVDLTHQINENSPHFPALPALEKKALFTH
                     KDGFFVEQFTVVGQYGTHIDPPIHFVEGARYLDEIDLKDLLLPLYVIDKSYAVAADND
                     YEISKQDILDFEAEHGPIAPESFVAFRSDWSKRWPSQDAIRNLDEQGVQHTPGWSHEA
                     LEYLIEERKVKAVGHETLDTDSGVSAAKHGGSLPEEYYLLSKDIYQLEVLANLDQVPP
                     TGALISIAFPHWEKASGSPVRVIAILP"
     gene            complement(9456..10805)
                     /gene="gorA"
                     /locus_tag="U1021_000833"
     CDS             complement(9456..10805)
                     /gene="gorA"
                     /locus_tag="U1021_000833"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HEM4711394.1"
                     /translation="MKVFDIIAIGGGSGGIATMNRAAMYSAKAAVIEGSYLGGTCVNL
                     GCVPKKIMWYGSQVAEAIQHYGPEYGFTSQEVTFDFATLRKNREAYIERSRASYGNTF
                     NNNGVEVIQGFARFVDNQTVEVNGELIRAKHIVIATGAKPVVPAIPGSELGIVSDDVF
                     AWEELPSSVAVIGAGYIAVEMAGLLHGLGVQTDLFVRGNRPLRSFDTYIVDSLMEEMQ
                     RTNLPLHTGKTPISLEKTDDGQIQINFADGSNHIAQKVLWAIGRKPNIDKLNLEATSV
                     QLTSSGHISVNEYQETAVPGIYALGDVTGEKELTPVAIKAGRLLAERLFNNKPTAKMD
                     YTTIPTVVFSHPAIGTVGLTEDEAIAQYGQEQVKVYTSAFTSMYTALENNRQMAKFKL
                     VTVGENEKVVGLHGIGYGVDEMIQGFSVAIKMGATKEEFDAVVAIHPTGSEEFVTMR"
     gene            11018..12175
                     /locus_tag="U1021_000834"
     CDS             11018..12175
                     /locus_tag="U1021_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEM4711395.1"
                     /translation="MLKTKKAKIALFGGLGVVAVALVGGALIFSNMLTSPSSSEDVAM
                     SMTYTVAKEGSIASSTLLTGTITAADEQYVYYDPSKGDLSEVLVAPGAKVEVGTPLIR
                     YDATELQSALDTAVRGRDKIGRQIADLRTNGQTVQTTGDAETDAAATATAQRSVDMQL
                     ADLNDSYADAQAAVDKAYTALTEATVTSTVAGTVVEVNKAVSKNATSSQTVVHIVNQG
                     SLQVTGSLTEYDLANIAVDQEVKLTSKVYPDKTWTGKITYISNYPSSDQAGAATTGTS
                     GSGAKYPFKAALTSELGELKQGFSVNIEVVNTSKNILIPVSAVVPEEDKNYVWTLVDG
                     KAKKVEVTLGNADALNQEVTAGIAAGDKVITIPTPNLEDGKEVEANEEPAY"
     gene            12156..12851
                     /locus_tag="U1021_000835"
     CDS             12156..12851
                     /locus_tag="U1021_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711396.1"
                     /translation="MKNQLIRLTSINKSYKNGDQELRVLKNIDLEVEEGEFLAIMGPS
                     GSGKSTLMNIIGLLDRSSSGNYWLEGEEVSQLSEKKLAQVRNDQIGFVFQQFFLLSKL
                     NALQNVELPLIYAGVPSSKRKELAKQYLEKVELAERMTHLPSELSGGQKQRVAIARAL
                     VNTPAIILADEPTGALDTKTGEQIMELLTELNNEGKTIIMVTHEPEIAAYAKRKIVLR
                     DGVITEDSRREGV"
     gene            12852..14099
                     /locus_tag="U1021_000836"
     CDS             12852..14099
                     /locus_tag="U1021_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4711397.1"
                     /translation="MENWKFALKSIMAHKMRSLLTMLGIIIGVAAVVIIVAMGTGVAK
                     SIEKSLAGDQNNVQVYFTAFSSSGTAFGPFGTASTEEPILEEEPELTDSTLKGLLEID
                     GVSNYYSSISNIAEVRSGNKKAENVTITGVSQNFFAVKEYEILAGRQFTANDYSRFSR
                     MIMLDTTLAEKLFGSIENSLNQTISVNSNAYLVIGVYKDPKAGTAIYGMNSGGNAVMT
                     NTQLAAETGMKENSQIFVHVEDVTRATEVGQAAADYLTKATGLKEARYEIYDMSAMLE
                     EFKSQMSGVTLFIGAVAGISLLVGGIGVMNIMLVSVTERTREIGLRKALGATRGNILI
                     QFLIEAMVLTTLGGAIGLAIAQTIVFLLNVSKALGERIAAEISIPVVLGSLAFSAVVG
                     IVFGVLPANKASKLDPIEALRYE"
     gene            14225..15289
                     /locus_tag="U1021_000837"
     CDS             14225..15289
                     /locus_tag="U1021_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEM4711398.1"
                     /translation="MVELGISTFGETTPLEKTGETYSHDERIRQLVKEIELADAVGLD
                     VYGIGEHHREDFAVSAPEIVLAAGAVNTKHIKLTSAVSILSSMDPVRLYQQYTTIDAL
                     SNGRAEIMAGRGSFTESFPLFGYDLHDYEELFDEKLDMLLEIDKETNLKWDGHFTQSV
                     DNKPVYPRPVQEDFPIWVATGGNVESTIKIAKKGLPIVYAVIGAGAYHFKPLVDAYRK
                     VARNSGHDPKKTKVAAHSWGWIADDHDKAVEEYYHPSKVITDNIAKDRPHWSEMTKVQ
                     YLYSLTDEGATIVEDPKRVAEKIIKTIETLDLDRFFLHLPIGSMPHEDVLRAIELYGT
                     EVAPIVREYFAKKEENQSQG"
     gene            complement(15563..17053)
                     /gene="lysS"
                     /locus_tag="U1021_000838"
     CDS             complement(15563..17053)
                     /gene="lysS"
                     /locus_tag="U1021_000838"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003055423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEM4711399.1"
                     /translation="MSTEHFEELNDQQIVRREKMTALAEQGIDPFGKRFERSANSAEL
                     KAQYEDKSKEDLEELGQTAIIAGRIMTKRGKGKAGFAHIQDREGQIQIYVRKDDVGEE
                     NYEIFKKADLGDFIGVEGDVFKTNVGELSLHARKLTHLSKALRPLPEKFHGLTDIETR
                     YRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFI
                     THHNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQ
                     AYADYLDIMDLTEGIIQHTAKAVVGDGPVTYQGTEIAIHEPFKRIHMVDAIKEQTGVD
                     FWQEMSFEEAKALAAEHKVPVEKHHTEVGQIINSFFEEYVEATLIQPTFVYGHPVAVS
                     PLAKKNDEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLERFEAQAKAKELGDDEATG
                     VDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK"
     gene            complement(17156..17782)
                     /locus_tag="U1021_000839"
     CDS             complement(17156..17782)
                     /locus_tag="U1021_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM4711400.1"
                     /translation="MKIYFVRHGKTEWNLEGRFQGYSGDSALLPESYQDLEKLGKYLA
                     EIPFDAIYSSDLQRAHSTAVEIAKANHHCQTVLTTQQLREWNFGTLEGSKMAIFRAIY
                     PKQAWALKHNLALFNNDLFEAESVRQVTQRMVDFVQSLKGQDMETVLIVSHGTFLTAS
                     IHRLLGFPPAQLRRRGGLDNASVTILETSDFENFTELAWNDTSYKAKQ"
     gene            complement(17785..18267)
                     /locus_tag="U1021_000840"
     CDS             complement(17785..18267)
                     /locus_tag="U1021_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA deacylase"
                     /protein_id="HEM4711401.1"
                     /translation="MAKKVKIKKTLVDQILDKAKINHDSLVLNAFEGQLPPGIEEHEI
                     YKTLALTGDKTGPIIGIVPITEHLSEKKLAKISGNKKVSMIPQKDLEKTTGYIHGANN
                     PVGIRQKHNFPIYIDQSALELGHLIVSAGEIGRSIRIDSQVLADFVKADFADLIEGRD
                     "
     gene            complement(18267..19109)
                     /locus_tag="U1021_000841"
     CDS             complement(18267..19109)
                     /locus_tag="U1021_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF368 domain-containing protein"
                     /protein_id="HEM4711402.1"
                     /translation="MASWISRIIKGMIIALGFILPGVSGGVLAAILGIYERLIGFLAN
                     IRKDFKENFLYFVPVGIGGILGIALFSFPVEFLLQHFQVPVLWAFAGAIVGTIPSLLK
                     ESTQKSKRDSIDLAWLIGTFIISGFLLYNLSDLVGTLPATFASFVLAGALIALGVLVP
                     GLSPSNLLLILGIYTPMLNGFKSLDLFGTFLPIAIGGVLAMVAFSKAMDHALKVYHSR
                     VYHFIIGIVSSSTLLILIPQASNKESISYAGANFVTWIAAIVLFILGAWLGLWMSKLE
                     EKYK"
     gene            complement(19212..19760)
                     /gene="thiT"
                     /locus_tag="U1021_000842"
     CDS             complement(19212..19760)
                     /gene="thiT"
                     /locus_tag="U1021_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupled thiamine transporter ThiT"
                     /protein_id="HEM4711403.1"
                     /translation="MSTSKLPILAEVAIFSAIALVFDKIPLFTMPQGGSISLVMLPIL
                     LLALRHGLGVGILTGGIVGTIQLFYGGYFLNVFQVFLDYALSYAGIGLAGLVAPTLSK
                     QKNLKNATLIITLASFLGGSIRLVATFLSGIIFYADYAPAGTPVWFYSFTYNISYILP
                     STAIASILLILLYRARPGFYNL"
     regulatory      complement(19819..19914)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(19938..20792)
                     /locus_tag="U1021_000843"
     CDS             complement(19938..20792)
                     /locus_tag="U1021_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 25 protein"
                     /protein_id="HEM4711404.1"
                     /translation="MRKKLNPMIVVVFFLSFFALIFITGVTGNTVNKTEVANEPAVTQ
                     SNTSTSSKTTNSSSSYYIANALEMKPIVDVSAWQRPSEIDYDTLSKNISGAIVRIQSG
                     SHTKNENTATDKNGLDKSFDTHIKEFQARNIPVAVYAYVTGNSIESMQEEARSFYKAA
                     NKYNPTFYWLDVEEYTMDDMNAGVEAFRKELETLGAKNIGIYVGTYFMEDHSINVDKF
                     DAIWIPTYGDDSGYYNAAPNTDLDYDLHQYTSRGYVNGFEHHLDLNIITTLKDPNEVY
                     QKLFTTPE"
BASE COUNT         6386 a         3872 c         4540 g         6098 t
ORIGIN      
        1 gtatgcaaaa atgaatctgt ataaaaaaac agtactattt ctcaaagttt gaacaacatc
       61 ccagtgtagt aaaaacgttt ggagacagat tgtttcagct caacaactgg gaatgaagac
      121 ttattaccta tactctttga aaatcaaaat cagacgttat tgacttgatt tgatttgatg
      181 aacttcagtt ctatctgcat ctgcgtcgcc tagtctgatt ttgattttca ttgagtatta
      241 tctgtctagt tctttctctc ttccattttg tgtttataat gttttaggtg attgtgggac
      301 gaattgctaa tggaacggtt ttactcctag tcttatctga gtaataatag gataaaactc
      361 atatacccac ataagagtga tagaggtttg tgaatagtat ttagttagaa acatttgtta
      421 tcaaatacag gttctacgtt atatttaaag aacttttcta tcattcgtta ggaaatattt
      481 cttctccgat ttatcgctag ataggagtag tttatgcgtt tctaaaaatc taaagttgga
      541 ggatgttcaa ttttaaataa gttacaatct gcaaatcact actaaaatca atttatccct
      601 tatacagggt aatgtaataa attatttttt ctttgttttt tgtatgtttt ttcaaaaaaa
      661 tatatgaaac aaatgaggga aatctagtga tgcactagct atgaaaaaat atttatatta
      721 atggaattgt ttgagaaatc aaaaggatgt agtttttcga tttgcataca tattttaact
      781 taaacatatg tgtgcaaaaa gttctgattt tttgtgtttt ttaagaaatt ggcattgttg
      841 acaaactaag gattggcttg gtatcatgca caggctaatt tgattgtatt atatttgtaa
      901 aaatgtatat gttttgattg ataggtgata tttagaagta aacaagcata tattttgtag
      961 cgaaagcaat atcagcaaaa aggagagagg aggaagcaat gttaaatgca aaagacctta
     1021 gaaaactgaa gcgttctgaa ttatttgaac tcttggttga gcaggcaaag gaaatagagt
     1081 cttatcaagc aaaattagta gatttggaaa aaagaattga gtatcgcgaa gtggttttgg
     1141 gagaaattgg ttcgatagtg gaggcgtctc tagcagttac taggattttt gaagaagcac
     1201 aattagctgc aaatatttat cttgaacagg ttcaaaaagt tacacataaa caatctgata
     1261 attgtgaaat agggagaata gatgaggatg gtgactaata aaaataagga ttatgttact
     1321 atatcagatt tacccagtat atcaataatg tcagaggagc tggataaaat acgatataaa
     1381 gagcggtatc ttgagacatt aaaaaatact attttcacgc ttgttactgt cgctgcactt
     1441 gcagtattaa tagccatgtt atggttgcta gttctgcata tttatggaag ttctatgtct
     1501 cctactctgg aagcaggtga tatggtggca actgtgaaga caaatacact ttcaactgga
     1561 gatatggttg cattctacta caataataag gttttggtaa aaagagtagt agcaacttct
     1621 ggtcagtggg taaatataga tgagcagggg aatgtttatg taaatggaaa aacattagac
     1681 gaaccctatg ttaaagataa ggcctatggt caaactgata ttaaactacc gtaccaggtt
     1741 ccagaaggtc aatattttgt aatgggagat catcgcagtg tatctattga ttctagaaat
     1801 acagctattg ggtcgattgg tgaggagcaa ctggttggaa agttaacctt tcggatatgg
     1861 ccatttcata aaatgggagt aatcaaataa aggaaggaga tataaaaaaa taaaatatta
     1921 taggagagat tgtttaaatt tgttcagcaa tactttcgag agaaaaagac tgcaaaaata
     1981 actatgtcat tgtcaataat tatggctttt ggaatatcat atttgctgat tttaccagcc
     2041 attactttag agacagacag tcaggagagt gttctgcaat cagtctataa tcagccatca
     2101 acagtagaac agccagttca agaagaacag gcggagtcac agttagcaca ggttcaatct
     2161 gctggaagct tattcgctga acatgaaaat ataactgtac aagttaacta tgaggagcat
     2221 acatttgaac agccagttcg gttacaggtt ttaccctcag aagatagtac aaaatatatt
     2281 ggacttgttc ggtaactaca tcatctcatg gttgatgata ccacaaatca actcagttct
     2341 taattcaaac cgttttctac gattacgata gggctgtgcc atgatttgaa aggttttaaa
     2401 tttggcatta aagtgttcaa cttcaatacg gattttagct atctctcgat tcaaccctct
     2461 atcctcttcg gttaagaggt gatgtttaga acgtttagca ggaataaagg tattttcgtg
     2521 aaatttcaag atgcctaaat accctaaatc tacgaaaaca agggtatttt ggggcaaact
     2581 atagccaata ctctccttaa aaagggtaaa atcatgcgta tgaccatctg aaaaagccaa
     2641 ttgacaagca cgatggctag tcaaatcagg catgatttga gtctgctagt ctttttctta
     2701 ataactgggc tattattgtt attatatcca acagtaagtg attattggaa ctcacattat
     2761 caatcagaag cagtagctac ttattctgag aaattattgg atatttcaaa agaagaaaaa
     2821 caaaaaattt tagaaaatgt cagtgcatat aacaacatgc tcgaaaaggg gacaatacct
     2881 aatttaaata tagacagtgt agctttaaaa aagtatgact caattttaaa tatcacagat
     2941 actggtatta tgggctatgt agaaattcct aagttgcaga caacgttacc tatttatcac
     3001 ggaacggatg atgccgtatt gcaggtagca gtaggtcacg ctgctatttc aggacatcgg
     3061 ggattgcctt ctgcaaaact gttttctgat tcagatcagc tggttatagg ggacacattt
     3121 atgatacaag ttttagataa cactctgaca tacgaaattg ataaaattat tacggttact
     3181 ccagatgatg tatctccttt gatgatagat ccgaatgagg atttcgtaac ccttgtgact
     3241 tgcacacctt atggtgttaa tagccaccga ttattagtta gaggtcatcg aattgaaaat
     3301 caactactta ctaagcaagt agtctcagag ggatcaattg taaaacctat attggtttct
     3361 ccttttattg ctttatgttt attaggacta ctttggagtt tattttttta taaaaaaaga
     3421 agtaaatttg tttatgtgac ttagatagta tcgcaaagaa tgtcaaacta ttcgactttg
     3481 ttctttagct tttaagctta ggaaagggag gtttttccaa ctcccaatca tccaaaaggt
     3541 gaaatagaag ataaactaaa tgacgatata tcaatgtcct ctatacgcta gaagaaggag
     3601 gtaaacgagc tgtcggattc aaattgtcag acggcattga cattcccaaa gaatttgaag
     3661 gcaaattcaa gtttgcccgc caacgctcca aactagctgg cgaaattcgt ggcaccttct
     3721 ttgttgtcaa gggcgagtat ttataggatg gcaaatctgg ggaaacccag attttttaaa
     3781 taatgacttg acctggagtg gacttcaagg tgtataataa gcgaaaacaa agaaaggagc
     3841 ctggaatgaa tatcaaagaa gttagtgatg taacaggtct atcagcagat accattcgct
     3901 actatgagcg gataggactt attcccaaaa ttgcaagaaa atcttctgga gtaaggaact
     3961 tttcggaaag tgatgtagct attttggaat ttatccgctg ttttaggagt gctggtatgt
     4021 ctattgagcg cttgattgag tatatgggct tggtgcaggc aggagatagt acagtggaag
     4081 ctcggattga tttactaaaa gaggaacagg aagaactgcg gtcacgcttg tcggaaattc
     4141 agcaagctct agatcgttta gattataaaa tagaaaatta ccagactata ttaagaggtg
     4201 cagaaaatca attgtttaca gacggcagtg gttcatgcaa aaaagacaga gaataacttt
     4261 ctctgtcttc atacttcatt attcattttt tctgataact tgtttgggtt taaatttctt
     4321 ctttagtcca atttgaacca aacgtagtcc aagaaaaccc gtcgcacttg ccaatatgat
     4381 ggcaataaaa acaggaatgc ctacagacag atagacataa ctagcgatga ctgttatcaa
     4441 actaaaaaat gcgatattaa caaaaaacaa caattccttt agacgttctt tattggcatt
     4501 ttttgcttga taggtttgaa aattagcctt tttctctttc gggatatact cttcgtactg
     4561 gtactcatgg gactgatagt gtcttaatgc catatcgtct ccttttctgc tccttaaaga
     4621 ataccataac attgctgaat ttttatgtca tttatattac aataatgtta caagagaaag
     4681 attagaaaag tctgaacatt aaaatacagg tagtcactta tcagatattt ctctttttga
     4741 tataattatc tttatggaaa aaattatcat tacagcaaca gctgaaagta ttgagcaggt
     4801 caaagaactg cttgcagcag gagttgaccg tatttatgtt ggggaagagg accatgccct
     4861 gcgcatccca acaaatttta cctatgatga actcagggaa atagcagagc tagttcatag
     4921 cgctgggaag gaattgacgg tcgctgccaa tgccctcatg caccaagata tgatggacaa
     4981 tatcaaaccg tttatggagc taatgaggga aatcaaggtt gattatctgg ttgtcggaga
     5041 tactggaatt ttctatatca ataaacgtga tggctacaat ttcaagctaa tctatgatac
     5101 atctgtcttt gtgacttcca gccgtcagat taacttttgg aaagatcatg gagcagtaga
     5161 ggctgttttg gcaagagaga ttccatcaga agaactcttt gatattgcta agaacttgga
     5221 aatgccagcg gaaatcttgg tctacggcgc ctctgttatt caccattcta aacgaacctt
     5281 gttacagaat tactacaatt ttacaaaggc tgatgagaca gatttgtcac gtggacgcgg
     5341 acttttctta gctgagccga gcgacccaga tagccactat tccatttttg aagataagca
     5401 tggcacccat atctttatca acaatgacat tgatatgatg accaagttgt cggaattaga
     5461 tgaacatggt tatcataatt ggaaacttga tggtatctat tgccctggtc agaactttgt
     5521 ggaaattgtt aagctttttg ttcaagcaag agatttgatt gaaaaaggcg acttcactta
     5581 tgatcaggcc ttccttttgg atgaacaggt acgcaagctc catccagctg aacgtggctt
     5641 ggatacaggc ttctacgaat ttgaccgcaa taaggttaaa taacaatatt tatcgcacaa
     5701 tttatttact ttaacctggc agagttggct ctgtcctagg ttgccgagtg aaacaacatc
     5761 gtttacagta ttctatcctg caaatagaaa gaagtatatt atgtcaaaaa cattaaagcg
     5821 tcccgaggtc ttgtcacctg ctgggacttt ggagaaattg aaggttgcca ttgattatgg
     5881 tgctgatgct gtctttgttg gcggccaggc ctacggtctg cgtagccggg ctggtaactt
     5941 taccatggac gagatgcggg aagggattga atacgcccac gcccgtggtg ccaaggtcta
     6001 tgtggctgcc aacatggtca cccacgaagg taatgaagaa ggagcaggag cctggttccg
     6061 tgaattgcgt gacatgggct tggatgccgt tatcgtatcc gacccagccc tcatcgttat
     6121 ctgtgctact gaagcgccag gccttgaaat ccacctgtct acccaggctt catcaaccaa
     6181 ctatgagacc ttcgagttct ggaaggaatt gggcttgact cgtgtcgtcc tggcccgcga
     6241 agtgactatg gaagaggtgg ctgaaatccg taaacggaca gacgttgaaa tcgaagcctt
     6301 tgtccacggt gccatgtgta tttcctattc aggtcgctgc gttctctcta accacatgag
     6361 caaacgcgat gctaaccgcg gtggctgctc ccagtcttgc cgttggaagt acaacctcta
     6421 cgacctccca tttggtgaag aacgccgttc gattaagggg gaaatcccag aggagttctc
     6481 catgtctgca gtggacatgt gtatgatcga ccatattcca gatatgattg aaaacggggt
     6541 cgatagcctg aaaatcgaag gccgtatgaa atctgtccac tacgtatcaa cagtgaccaa
     6601 ctgctacaag gctgcggtag atgcctatct tgaaagccca gaaaagtttg aagcgatcaa
     6661 gcaagacctg attgatgaga tgtggaaggt tgcccaacgt gaattggcga caggtttcta
     6721 ctatagcccg ccgagtgaaa atgagcagct ctttggagcc cgccgtaaga ttccagaata
     6781 caaatttatc gccgaagtag tggcttttga caaggaaacc atgactgcaa ccattcgtca
     6841 gcgtaatgtt atcaacgaag gtgaccaagt agagttttac ggaccaggtt tccgtcattt
     6901 tgaaacgact attcaggaca tgcatgattc aaatggagaa aagattgacc gtgccaacaa
     6961 gccgatggaa ctcttaacta ttaagctgga ccgtgaaatc tatcctggtg acatgattcg
     7021 tgcctgcaaa tcaggcctca tcaacctcta ccaagaagat gggcaatctc taactattcg
     7081 tgcataaaca taaaaaggct gaaatttcag cttcagaacg tagataaact cttaaaaata
     7141 taaaaaattg aagaagtttg cgaaagatag caagtcatta aactcgtaga aacattgata
     7201 tttcggtgtt tctgagagtt tttaattttc aacataaaga aaaaagattg aagaaaattg
     7261 tccaaaatgg actttttctt caatctgcaa ggctgaaatt tcagcatttt gtttgttgtt
     7321 gagaagtctt gatgctatct ggaaccaagg tgactttttt gatgtcctcg atttttataa
     7381 tgctggtaac ctgacgtttg aaatttttca tgataatccg ttggcgatcg gtatcatatt
     7441 ttacaatgtc acctgtgaaa ctacgatcac catagatgac atggactgca gcttttttat
     7501 ataaagccag ctccaagtta ttcttgatat cttccttgct atctggctca atagacttag
     7561 gagctttgcc gtgttctaaa aagacggtga tctgctcgaa aataactgct aaaaacctct
     7621 tcatggcata atcctttcaa acttgatata attatattat ctaattttta taaaaatgac
     7681 aagctttttc gaatagataa gtgaggaggt aacaaatggc agaatttaca tttgaaattg
     7741 aagaaaaatt attggtctta tctgaaaatg ataaaggatg gaccaaggag cttaatcgag
     7801 tatcttttaa tggagcacca gcaaagtatg acatccgtac ctggagtcct gaccatacca
     7861 agatggggaa aggaatcact cttagcaatg aagaattcca agtcctcttg gatgcctttg
     7921 ctaataaata aatgaaagaa gcctaagcga aaaaggcttc ttttttggtg ataggttgca
     7981 ataggcggtg gcatagagta acaatggcaa ttttgaccaa gtctggcagg ataaagggaa
     8041 ggacggtcca ggctaaggta tctgaccagc tcgctcctga aacaagctta aagaccaaac
     8101 agcctaaaag gaaacaactt gcggttccta atagacaggc taagaaaaca gtcacaggtg
     8161 aagaagtcga cttggtgagg actgaagtaa tagcggcata gactaagaag ccccataaaa
     8221 agcctgcagt tggtcccatg agagcagcaa atccacccga aaatccagca aagacaggaa
     8281 gtccaatagc tcccaaagtc aagtagaggg ctacacttgc aagggcctct ttaggcttgt
     8341 acaaacaagc tactaagcca atagccaagg tttgcagggt aaagggaaca ggcccgatag
     8401 acaggctgat ttgtgacaag gcagcaataa tagctgtacc gatagcgata taaacaagag
     8461 atttcgtaga atgatttgtc attttgttat cctttatatt tttttaggtt aacaaaatta
     8521 tagacgttct agggatgaaa gtcaatgttt ccatcatcgg ctgtcacagt gttatagttt
     8581 ttatttatgg gagtagatag aaaatatata ttagtagagt ttcttctttc gtgctagaat
     8641 gataacaaaa agaaagcgag aatgcctatg tcagaattac ttgaaattta ccgcaccctt
     8701 aaatctaaaa cctgggtgga cttgacccat caaatcaatg agaatagccc ccatttccct
     8761 gctcttccag ctttggagaa aaaggccttg tttactcaca aagacggatt ctttgttgaa
     8821 caatttacgg ttgtggggca atacggtacc catatcgatc cgccgattca ctttgtagaa
     8881 ggggctcgct atctggatga gattgacttg aaagatttac ttctaccgct ttatgtaatc
     8941 gataagtcgt atgctgttgc tgccgataat gattatgaga ttagcaagca agatattttg
     9001 gattttgaag ctgagcatgg tccaattgcg ccagaatcct ttgttgcttt tcgttcggat
     9061 tggtcaaaac gttggccaag tcaagatgct atccgaaatt tggatgaaca aggtgtgcaa
     9121 catacaccag gttggagcca tgaagcccta gaatatttga ttgaagaacg caaggtaaaa
     9181 gctgttggtc acgaaacctt ggatacggat tcaggagtat cggctgccaa acatggtggt
     9241 agcctaccag aagaatacta tctcctatca aaagatattt atcagttgga agtattggca
     9301 aacttggatc aggtaccacc aacaggtgca ttgatttcaa tcgcttttcc tcattgggag
     9361 aaggcttcgg gttcaccagt gcgagtaatt gctatattac cataagaaaa agtccagaca
     9421 gtgctgactt tcatgtctgg actttttcaa ttgagttaac gcatagtaac aaattcttca
     9481 gaacctgtcg gatggatggc gacaacggca tcaaattctt cttttgtagc tcccattttg
     9541 atagcaactg agaatccttg aatcatttca tcgacaccat agccaatgcc gtgcagtcca
     9601 acgacttttt cattttctcc cacagttact aatttaaact tagccatttg gcgattattt
     9661 tctagggctg tgtacataga agtaaaggct gaagtataga cttttacctg ttcttgaccg
     9721 tattgagcga tagcttcgtc ctcagttaga ccaacggttc cgatagcggg gtgagaaaag
     9781 acgacagttg ggatggttgt gtaatccatt tttgcggttg gtttattgtt aaataaacgt
     9841 tctgccaaaa ggcgacctgc cttgattgca acgggtgtta attctttttc accagttaca
     9901 tcaccgaggg catagatgcc tggtacagct gtttcttggt attcattgac agaaatatgt
     9961 cctgaagaag taagttgaac actagttgct tctaggttga gtttgtcaat atttggttta
    10021 cgtccaattg cccaaaggac cttctgagca atatggttac taccgtcagc aaagttaatc
    10081 tggatttgtc catcatcagt tttttcaaga ctgataggag ttttcccagt atggagtgga
    10141 aggttggttc gttgcatttc ttccatcaag gaatcaacaa tgtaggtatc aaagctacga
    10201 agagggcgat ttccacgaac aaataggtca gtttggacac cgagtccatg taggagaccg
    10261 gccatttcca cagcgatata accagcacca atcacagcca cagaagaagg taattcttcc
    10321 catgcaaaga catcgtcaga tacaatccct agctcactac caggaatagc agggactacc
    10381 ggtttggcgc cagttgcgat gacaatgtgt tttgcacgaa tcagctcacc attgacttca
    10441 accgtttgat tatccacaaa acgtgcgaaa ccctggataa cttctactcc gttattgtta
    10501 aaagtattac cgtaggatgc gcgtgaacgc tcaatatagg cttcgcgatt tttacgcaag
    10561 gtggcaaaat caaaggtcac ttcttggcta gtaaatccat attcaggtcc ataatgctga
    10621 atggcttctg ctacctgaga gccgtaccac ataatttttt tgggtacaca gccaaggtta
    10681 acacaagtcc ctcctagata gcttccctca ataactgctg ccttggcact gtacatagca
    10741 gctcggttca tggtagcgat gcctccgctc ccacctccga tagcgataat atcaaacact
    10801 ttcataaatt tcctccaata aaatcattaa ctatattcat tgtaacgctt ttttgtgtgt
    10861 caatcaaaaa tccgctacgt taccttacaa aaatgtaagt gggaaaattg ccgaactttt
    10921 tataaaatag ttaggaaaaa acttgcattt gttcttgtat ttgtgtatta tatagacaac
    10981 acaaataggt atgttttgta aagaaaagga gtttgttatg ttaaagacga agaaagcaaa
    11041 aattgctttg tttggtggtc ttggggtagt cgcagttgcc ttagtaggtg gggctttgat
    11101 ttttagcaat atgctaacat caccatcatc ttcagaagat gtagccatga gtatgaccta
    11161 tactgttgct aaagaaggct caattgcttc ctcaacgcta cttacaggaa cgattacagc
    11221 agcagacgag cagtatgttt actatgatcc ttctaaggga gatttgagtg aggttttggt
    11281 tgctccaggt gctaaggtcg aagtaggtac ccctttgatt cgctatgatg ctacagaatt
    11341 acagtctgct ttggatactg ctgttcgtgg tcgtgataag attggtcgcc aaattgcaga
    11401 cttaagaacc aacggtcaga ctgttcaaac aactggtgat gcagaaacag atgctgcagc
    11461 aactgctact gcacaacgtt cagtagatat gcagttggca gacttgaatg attcgtacgc
    11521 agatgctcaa gctgcggttg ataaagcata tacagcctta acagaagcga cagtaactag
    11581 taccgttgct ggtacagttg ttgaggtgaa taaggctgtt tctaagaacg ctacatctag
    11641 ccagacagtt gtacacattg taaatcaagg tagtttgcaa gtaacaggta gtttgacaga
    11701 atacgatttg gctaacattg cagtggatca agaggtcaag ttgactagca aggtatatcc
    11761 cgataagact tggacgggga aaattaccta tatttcaaac tatccatcta gtgatcaagc
    11821 tggtgctgct acaacaggaa ccagtggttc aggtgccaaa tatccattta aggcagcttt
    11881 aactagtgaa ttaggtgagt tgaagcaagg attttctgta aatattgagg ttgtcaatac
    11941 aagtaaaaac attttaattc cggtgtccgc agttgtgcca gaagaagata aaaactatgt
    12001 gtggaccttg gttgatggga aagctaagaa agtagaagtt actctgggga acgcagatgc
    12061 tttgaaccag gaagtgaccg ctggtatagc agcaggagat aaggttatta ccattccaac
    12121 tccgaatctc gaagatggca aagaggttga agccaatgaa gaaccagctt attagactaa
    12181 caagtatcaa taaatcctac aaaaatggtg atcaagaact ccgagtttta aagaatattg
    12241 atttagaggt ggaagaggga gaatttcttg ccattatggg gccctctggt tcagggaaat
    12301 caaccttgat gaacattatt gggcttttag atcgttccag ttcaggaaac tattggttgg
    12361 aaggtgaaga agtcagtcaa ctttctgaga aaaaattagc tcaggttcgg aatgaccaaa
    12421 tcggtttcgt ctttcaacaa tttttcctct tatcgaaact taacgccctt caaaatgtag
    12481 aattaccctt gatttatgct ggagttccat caagcaaacg taaggaacta gctaaacagt
    12541 atcttgaaaa agttgagttg gcagagcgga tgacgcattt accatcagaa ttgtctggtg
    12601 gtcaaaaaca acgggtggct attgcgcgtg cactagtcaa tactccggct attattttag
    12661 cggacgagcc aacaggagcc ttagatacta agacaggtga gcaaatcatg gaactcttga
    12721 ctgagttaaa taatgaagga aagaccatta tcatggttac gcacgagcct gagattgctg
    12781 cctacgcaaa acgaaaaata gttctacgtg atggagtgat cactgaagat agtcgaaggg
    12841 agggagttta gatggaaaat tggaaattcg ccctcaaatc tattatggct cataaaatga
    12901 gatcgctcct tactatgtta ggtatcatca ttggtgtggc tgcagttgtc attattgttg
    12961 ccatgggaac aggggtggct aaaagcatag aaaagtcttt agctggtgat caaaataatg
    13021 ttcaggttta ctttactgcc ttttccagtt caggtacagc ttttggtccg tttggtacag
    13081 cgtcgacgga agaaccaatt ttagaggaag agccggagtt gacggattct actttaaaag
    13141 gactgctaga gattgatggc gtatcaaact attactccag catcagcaac atagctgaag
    13201 tcagatcagg caataaaaaa gcagaaaatg tcactattac tggtgttagc cagaatttct
    13261 ttgctgtgaa agagtatgag attttagctg gtcgtcagtt tacagccaac gactatagtc
    13321 gtttttcacg tatgattatg ttagatacga cattagcaga gaagttattt ggttctatag
    13381 agaactctct caatcagacg attagtgtta atagcaatgc ctatctagta ataggggtct
    13441 acaaagatcc gaaagcaggg acagctattt atggaatgaa ttcaggtgga aatgccgtca
    13501 tgactaatac gcagctagct gctgaaacag gcatgaaaga aaattctcaa atctttgtcc
    13561 atgttgaaga tgttactcgg gcaacagaag ttgggcaggc tgctgcagat tacctgacta
    13621 aagcgactgg attgaaagaa gcgagatacg agatttatga tatgtcagct atgttggagg
    13681 agtttaaatc tcaaatgtct ggcgttacat tgtttatcgg tgctgttgca ggtatctcct
    13741 tgctagttgg tggtatcggt gtcatgaata tcatgctggt atcagtaact gagcggactc
    13801 gtgaaatcgg tcttcgaaaa gcgcttggag caactagagg aaatatcttg attcaattct
    13861 tgatagaagc catggtcttg accactcttg gtggagcgat tggtctcgca atcgctcaga
    13921 caatagtttt cttgctcaat gtgagcaagg cgttgggcga aagaatagct gctgaaatat
    13981 caataccggt tgttttagga agtttggctt tctcagcggt agttggtatt gtatttggtg
    14041 tactacctgc taacaaagca tctaagcttg atccaattga agctttgcgc tatgaataat
    14101 ctattgaaac gattaggttt tcctagtcgt tttatttttt gagcaaatca attgattgta
    14161 tcactaatta gagataaaat agacgtatca actaagaaat agtgatttca aaggagaaca
    14221 catcatggta gaattaggca tttcaacatt tggcgaaaca actccactag aaaaaacagg
    14281 ggaaacttac agccacgacg agcggattcg ccagctagtc aaagaaatcg aactagctga
    14341 tgcggtggga cttgatgttt atgggattgg ggagcatcac cgagaagatt ttgcggtttc
    14401 tgcacctgag attgtgctgg cagctggtgc cgtcaatacc aagcatatca aactaacatc
    14461 agcagtttca atcctttcct ccatggaccc tgtaaggctc tatcagcagt acaccaccat
    14521 tgatgctttg tcaaatggca gagcggaaat catggcgggt cgtggttcct ttacggagtc
    14581 attccccttg tttggctatg atctccacga ctatgaagaa ctcttcgatg aaaagctaga
    14641 tatgcttctg gaaatcgaca aggaaaccaa tctcaagtgg gatgggcatt ttactcagtc
    14701 agtcgataat aagccagtct atccacgtcc tgttcaggaa gattttccga tctgggttgc
    14761 aactgggggc aatgtagagt ccaccatcaa gattgctaag aaaggcctgc caatcgtgta
    14821 tgctgtcatt ggtgcaggtg cctatcactt taaaccttta gtcgatgctt atcgcaaggt
    14881 tgcccgcaac tcaggtcacg atccgaagaa aacgaaagtt gcagctcatt cttggggttg
    14941 gattgcagac gaccacgaca aggctgtgga agaatactat catccaagca aagtaattac
    15001 ggacaatatt gccaaagacc gcccacattg gagcgagatg accaaggtgc aatatctcta
    15061 ctctctgaca gacgaaggag caaccatcgt cgaagatcca aaacgagtcg ctgaaaaaat
    15121 tatcaagact attgaaacac ttgacttgga ccgtttcttc ctccatctcc caatcggctc
    15181 catgccacat gaagatgtcc tccgtgccat cgaactctac ggaacagaag tcgcgccaat
    15241 tgtccgagaa tattttgcaa agaaagaaga gaatcagtcc caaggctgat gagatagttg
    15301 ataggatgag ttatactata gttaatccta aatatttttc ataatctcct gaaaatcctg
    15361 actatgtggt tgggattttt ttgcatgcaa aaacactctt ggaatttcca agagtgtttt
    15421 aagtaacggt gttaaacagt ttgtaatttt tatttcatcg tcgggagtga aaaggtctag
    15481 tagacctttt cagccaatcg ctaagaaact ggagagcgat tggtacattc tagtgaaaac
    15541 aatcctagca agctactctt acttacttca tagtcggaaa taggagtaca tcccgaatag
    15601 ttgttgtgtc tgttaagagc atgcagaggc ggtcgatacc gattccaagt ccacctgttg
    15661 gtggcatacc gtattcgagg gcttcgatgt agtcgtagtc aacgcctgtc gcttcgtcgt
    15721 caccgagttc tttagctttg gcttgggctt cgaagcgttc caattggtcg attgggtcgt
    15781 tcaattctgt aaaggcattt ccgtattcct tggtcatgat gaagagctcg aagcgatctg
    15841 tgaagcgtgg gtcttcatcg tttttcttag ccagtgggga tacggctact gggtgaccat
    15901 agacgaaggt tggttggata agagttgctt caacgtattc ttcaaagaag ctgttgatga
    15961 tttgaccaac ttctgtatgg tgtttttcca cagggacctt gtgctcagct gcaagggctt
    16021 ttgcttcctc gaagctcatc tcttgccaga agtccacgcc agtttgttcc ttaatggcat
    16081 caaccatgtg gatacgcttg aatggctcgt ggatagcaat ttcagtgcct tgataagtaa
    16141 caggaccatc gccgacaaca gccttggcag tgtgctgtat aataccttcg gtcaagtcca
    16201 tgatgtccaa gtaatctgca taagcttggt agacctcgat tgacgtgaac tcagggttgt
    16261 gagtcgcatc cataccctcg ttacggaaga tacgtccgat ttcataaacg cgttccatac
    16321 caccgacaat caagcgtttg aggtggagtt ctgtcgcgat acgaaggacc atgtcaatgt
    16381 tttgggcatt gtggtgggtg atgaatggac gagctgcagc accaccagct tcattgtgaa
    16441 ggacaggtgt ttccacttcc aagaaaccaa gtccgtcaag gtaacggcgg atttctgaga
    16501 taatttttga gcgggtcaca aagcgatcaa agctctcgcg gttagtaatc aagtccaaat
    16561 aacgtttgcg gtagcgggtc tcgatgtctg tcaaaccgtg gaatttttct ggcaatgggc
    16621 ggagcgcttt agacaagtga gtcaacttgc gagcatggag agacaactca ccaacgtttg
    16681 tcttgaagac atctccctcg acaccgataa agtcaccaag gtctgctttt ttgaagattt
    16741 catagttttc ttcgccaaca tcatccttac gaacgtagat ttgaatctgg ccttcgcggt
    16801 cttgaatgtg cgcgaaacct gccttaccct taccacgctt ggtcataata cgacctgcaa
    16861 tgattgctgt ttgtcccaat tcttctaagt cttctttcga tttatcttcg tactgggcct
    16921 tcaattcagc tgaattggca gaacgctcaa aacgttttcc aaatgggtca atgccttgtt
    16981 cagcaagagc cgtcattttc tcacgacgga caatctgttg gtcatttaat tcttcaaaat
    17041 gttcagttga cataaaaatt ttattcctcc aaagtctgtt atttctattt tatcatagaa
    17101 gagagaaaaa atcagtataa attgctaata ggataggaaa aaacagcaga aaattctact
    17161 gttttgcttt atagctggta tcattccaag ctaattctgt aaagttttcg aaatcgcttg
    17221 tttctaaaat agtaaccgat gcattatcca aaccacctcg gcgacgcagt tgggctggtg
    17281 gaaaaccaag taggcgatgg atagaagcgg ttagaaaggt accatggctg acgatgagga
    17341 ctgtttccat gtcttgccct ttcagcgatt ggacaaagtc caccattcgt tgagttactt
    17401 ggcgaacgct ctcagcttca aataagtcat tgttaaaaag tgctagatta tgtttgagtg
    17461 cccaggcttg tttgggatag atggcacgaa aaattgccat cttgcttcct tccagcgttc
    17521 caaaattcca ttcacgtaat tgttgcgtgg ttagaacggt ttggcaatgg tgattggctt
    17581 tggcaatttc tacggcagtg ctatgtgcgc gctgcaaatc actagaataa atagcatcaa
    17641 aggggatttc agcaaggtat ttgcctagtt tttctaaatc ctgataagat tcaggcaaga
    17701 gagctgaatc tccagaatag ccttgaaagc gtccctccaa attccattcg gtcttaccgt
    17761 gacggacaaa gtagattttc aagtctagtc cctcccctcg atcaaatcgg caaagtcagc
    17821 ttttacaaaa tcagctaata cctgactgtc aattcgaatc gaccgaccaa tttctccagc
    17881 agagacaatc aagtgaccga gttcaagggc agattgatca atgtagattg ggaaattatg
    17941 cttctgacga atgcctacgg gattgttggc accatggatg tagccagttg tcttttccaa
    18001 gtccttttgc ggaatcatac tcactttttt attgccagag atcttggcta attttttctc
    18061 agacaggtgt tctgtgattg ggacaatgcc gataattggt ccagttttat ctccagttaa
    18121 tgccagtgtt ttgtaaattt cgtgttcttc aattcctggt ggaagttgac cttcgaaggc
    18181 atttaaaaca aggctatcat gattgatctt agccttgtcc aatatttggt ccaccaaggt
    18241 tttctttatt ttaacctttt ttgccattat ttatattttt cctcaagttt actcatccaa
    18301 agccctaacc atgctcctag tataaatagg acaatagcag caatccatgt aacaaagttc
    18361 gctccagcat aggaaattga ctctttatta cttgcttgtg gaatcaaaat taggagagta
    18421 gaagatgaaa cgataccaat aataaagtga taaacacgtg aatggtatac tttcagagcg
    18481 tggtccattg cttttgaaaa tgcaaccatt gcaagaacac caccaattgc gattggtagg
    18541 aaggtaccga atagatcaag tgacttgaaa ccatttagca ttggcgtgta gatacccaaa
    18601 atcaatagta agtttgaagg gctgagtcca gggacaagta cccctaaagc aatcaaggca
    18661 cctgccaata caaaactagc aaaagtagct ggaagtgtcc cgacaagatc gcttaaattg
    18721 taaagtagga agccagaaat aatgaatgtc ccaatcaacc aagccaaatc aatgctatct
    18781 cgtttactct tttgagttga ttctttaagt aggctaggaa tagttcccac gattgctccc
    18841 gcaaatgccc acaaaactgg gacttggaaa tgttgcaata aaaattctac agggaaagag
    18901 aaaagtgcga ttcccaaaat tccaccaatt cctacaggaa caaaataaag aaagttttcc
    18961 ttgaaatctt ttcgaatatt tgctaaaaat ccaattagtc gctcatagat tccgaggata
    19021 gcagcgagta cccccccaga gacaccaggt aagataaagc cgagtgcgat aatcatacct
    19081 ttaataattc ttgaaatcca agaagccata atttcctcca aaatgtatta taacgttcct
    19141 attatagcat aaagcaagta aaaataatta aaaagactgc ctgttagata aaatccagca
    19201 ggcagttttg gttaaagatt gtaaaaacct ggtcttgctc tatagagtaa aatgagcaga
    19261 atagaggcaa ttgcagtgga aggaagaata tagctgatat tgtaggtaaa ggaatagaac
    19321 cagacagggg taccagctgg ggcatagtct gcgtagaaaa taattcctga taagaaggtg
    19381 gctaccaatc ggatgcttcc tcctagaaaa ctagcaagag taatgatgag agtagcattt
    19441 tttagatttt tttgtttgga tagggtgggt gccactaaac ctgctaaacc aattccggcg
    19501 taagaaagtg cgtagtcaag aaaaacttga aaaacgttta ggaagtagcc accgtagaaa
    19561 agttgaatgg ttcctacaat accaccagta agaataccca cccctagtcc gtggcgtagc
    19621 gcaagcagta agattggaag catgactaag gagatagatc caccttgggg cattgtaaag
    19681 agcgggattt tgtcaaagac gagggcaatg gcagaaaaga tagcgacttc ggctaggatg
    19741 ggtaattttg atgtggacat aaaaagactc ctttgtagat ggtcaacaaa ggagtgttta
    19801 tagcagagta tagtatcatt ctataaagca cacaattcct acgctagtgt taactagatc
    19861 aggttcgagg atttcgcagt tgcgatctca gccgaagcac tcctttgtgt atatgtaatt
    19921 ggtagaatta taacatttta ttcaggtgtt gtaaatagtt tctgataaac ttcattagga
    19981 tccttcaggg tagtaataat gttgaggtct aggtggtgct caaagccgtt tacataacca
    20041 cgtgaggtat attggtgaag atcgtagtcc aagtcagtat ttggagcggc attgtagtag
    20101 ccagaatcat caccgtatgt aggaatccaa atggcgtcaa atttatccac attgatgctg
    20161 tggtcttcca tgaaataggt tccaacgtaa attccaatgt ttttagcacc gagagtttct
    20221 aactcttttc gaaaagcctc cactccagca ttcatatcat ccatggtata ttcttcgacg
    20281 tctaaccaat agaaggttgg attgtactta tttgcggcct tataaaagct tcgagcttcc
    20341 tcctgcatgc tctcaatgct atttcccgtg acataggcat agacagcaac aggtatattt
    20401 cttgcctgga attctttaat atgggtatca aaggatttat ctaacccatt tttatcagtc
    20461 gctgtatttt cgtttttagt gtgtgagcca ctttgaatac gaacgattgc gccagaaata
    20521 tttttgctaa gtgtatcgta gtcaatttca gacggtctct gccaagcaga aacgtcgacg
    20581 ataggtttca tttcgagcgc atttgcaatg taataacttg aactagaatt tgttgtttta
    20641 gaacttgtac tggtgtttga ttgtgtgact gcgggttcgt tagctacctc cgtcttattt
    20701 acagtatttc cagtcacccc agtgatgaaa ataagagcaa agaaggatag gaaaaaaaca
    20761 acaacaatca tcggatttag tttctttctc atctcatcaa ttctaccgta aaatcatgaa
    20821 aaaatcaaaa aaatacgatt caagaaatag taaaggggac ctctaaaaac tcccaaaatt
    20881 gcgaatttgg agttac
//
LOCUS       DASFQD010000030        20853 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.030, whole genome shotgun sequence.
ACCESSION   DASFQD010000030 DASFQD010000000
VERSION     DASFQD010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 20853)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20853)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20853
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.030"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            132..509
                     /locus_tag="U1021_000844"
     CDS             132..509
                     /locus_tag="U1021_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NisI/SpaI family lantibiotic immunity
                     lipoprotein"
                     /protein_id="HEM4711405.1"
                     /translation="MKKKVFGLLALGSIMLTACSTSSAGLSFEEGYQIFHYKGKDYAV
                     SKQEVAEDSIQGTEVKFMEWPVVKEEGSVKKTVSLNNLYVTTNKEWAIGVQDGYYKVD
                     LEENVAESDRIDYQSVLENVDFT"
     gene            530..1432
                     /locus_tag="U1021_000845"
     CDS             530..1432
                     /locus_tag="U1021_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711406.1"
                     /translation="MLLEINHLKKVYKDVTTVDIEKITVREGEIYGFLGPNGAGKTTT
                     MKMILSLVTPTSGEIFINKKDIRNDKKYLNQIGSMIEEPSYYPNLTGYENLLVFQKMV
                     GFDKNNIRPTLELVGLADEKNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNG
                     LDPAGIHEIRELIVQLAKEKGLTVFISSHILPEIEHIADRVGIINHGRLVYEGEIEAI
                     KSNTWIEIGGDFSQKNIVQTLVELGTVEILSASESQVTLRDLDNDRLADLVSYLIENG
                     YRIFRVVRESETLEDIFLNLTKEA"
     gene            1434..2180
                     /locus_tag="U1021_000846"
     CDS             1434..2180
                     /locus_tag="U1021_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4711407.1"
                     /translation="MNGVYIEWLKSRRTKSISIVIILMLVATLWNIATFISAFSSHPE
                     LRMAGTLFSNQNVDLLMFPIAVCVFASRIVGNEHEGQTFKLQIANGQSLTAIFRDKFF
                     FMLVSFVIMSAIEIMIIYLFGTQAGISISLQIIGIQFIGQILAIFSLICLYLTLAMIL
                     EKQGILLALGLLGGFLGIILNPKSYGFTSLLNPITGSGSLAPYKYQFLGDGTITYNLD
                     SQLLEKIVCYAIYCLILYLLAVLILRKKGN"
     gene            2182..2916
                     /locus_tag="U1021_000847"
     CDS             2182..2916
                     /locus_tag="U1021_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4711408.1"
                     /translation="MKDYFLAEWTKTRKIQLLVIGIAFLSFSSMIGLGIYFANRDVLI
                     DGTQSLVLWGQLTFYNSTLLYPPMLAIIAGLLLVPEFERKTLDMLKANQVSMRKLYLG
                     KLMSSFLLILPIQLLLLLIFIVAAKIDGISFDLSLATHVKWIALSLLSSFPIITLQSY
                     ITVKTRNFSKGVGVATIGSMLNFVLIFINESFTKFFPYSQPMIGLRSRALQDMTFLEF
                     ILFITVNIVFSFIFYQLTIKNLENSK"
     gene            3052..3804
                     /locus_tag="U1021_000848"
     CDS             3052..3804
                     /locus_tag="U1021_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017650232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711409.1"
                     /translation="MLLEINHLEKVYRTRFSKEETRALQDVDFKVEEGEFIAIMGESG
                     SGKTTLLNILATLDKPTRGSVILNNQDITKIKESKLADFRLRNLGFVFQDFNLLDTLS
                     IQDNIFLPLVLARESYQEMEKRLEVLAPKLRIQDLLKKRPFELSGGQKQRVAIARSLI
                     TQPQIVLADEPTAALDYRNSEDLLNLFEEINRDGQTILMVTHSANAASHAKRVLFIKD
                     GRIFHQLYKADKSNQDFAKEISLNMSALLGGE"
     gene            3805..5775
                     /locus_tag="U1021_000849"
     CDS             3805..5775
                     /locus_tag="U1021_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEM4711410.1"
                     /translation="MFYLKLAGQNIRKSMGVFAPFVLASLVLFTLICSMFLIMLSPVM
                     KTMGSGAISIGLGVIILTIFSVIMEIYSFNFLMKQRAREFGLYNMLGMNKKKVALIAS
                     LELMMIFLLVVVLGSVLAGVFANVLYLIFVNITHYSDLHFGIEPLAFVMTAFLFAGFF
                     FLLELLAIRTIGKTSPLILFRASEKGEREPKGNVLLAALGVFSLGMGYYLSLSSKAEG
                     LAVIYRFFIAVLFVIAGTYLFYISFMTWYLKARRKNKRYFYTPEHFITTSQMIFRMKQ
                     HATGLANITLLAVMAFVTIATTTSLYTGMSSMTGVLYPKETSITYKVSYRSQGVAAYQ
                     QSVLSHFPEKANDNLSYLTYQAGLVYDGGSDIVINPETIANPDFSKMAFTYFITQDDF
                     RKLGNDLPELAANQVAFMRPSEMPSLKKLVLGDQTFENVANLDQAIFPDITNTLNAAV
                     MVVSDDTVLDAVREYYESNNPQGYTVSLDYRVFTDLTDEEVASIGQQTGDSYNINDAN
                     GEFLGYAMQKSDFNNLLMGFTGSFLFTGFLLGISFLLGAALIIYYKQYSEGHEDKKSY
                     KILQEVGMSQQAVKKTINSQTLLVFFMPLAMATLHFIVALVMLKQMLMVFGVVSSSMI
                     YTVSGITLLAVVLIYFVIYKWTSRTYYRIIER"
     gene            5867..6106
                     /locus_tag="U1021_000850"
     CDS             5867..6106
                     /locus_tag="U1021_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HEM4711411.1"
                     /translation="MAAITLKVSEQDKLFMQAMAKFEGVSLSELIRTKTLEALEDEYD
                     ARVADVAWAEYQADLANRIEPMTLEQMAEELGIEL"
     gene            6096..6353
                     /locus_tag="U1021_000851"
     CDS             6096..6353
                     /locus_tag="U1021_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEM4711412.1"
                     /translation="MSYKVILSAKAQKQIRKMDKTAASLILRYLYKHIDGCDNPRQYG
                     KALTANRSGQWRYRIGNYRVIVNIEDDKLIVTSIKMRNGSI"
     gene            6392..7057
                     /locus_tag="U1021_000852"
     CDS             6392..7057
                     /locus_tag="U1021_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012961975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4711413.1"
                     /translation="MKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAE
                     IKPDLVLMDISLPYYNGFYWTTEIRKTMTMPIIFISSSDDEMNAVMAMNMGGDVFVSK
                     PFSLGILDAKIGAFLRRVNQFSKSTDLSIDQFQLSLDGRFSNELEQVQLSPTETKILS
                     ALLERQGQIVSKEELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFERIHTVRGVGY
                     LVK"
     gene            7054..7995
                     /locus_tag="U1021_000853"
     CDS             7054..7995
                     /locus_tag="U1021_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM4711414.1"
                     /translation="MIAKFIREYRSFYFSYIVLATSFILLFFLYQLPTEFLQNALLLS
                     LTLLILLTVGLFWKFRNRMRALEDYVHEEALPLLNKPVDLAYLNLIEAEKEATREQLL
                     VYKSREEDLQAMVKMWSHQMKVPLAALSLMSQTDNLNQQDVNHQLLRLDNYMANLLNY
                     LKLTNHASDFRFEQVEVREVVVDLVKKYRNQFLQKDISVTIDGNWLLKSDRKWLSFAL
                     SQIIDNALKYNKTGGKVAIELNEGISISDTGIGILAEDIPRLFDEGFTGFNGREHQKA
                     TGFGLYLTKRVLNQLELAISVESQLEVGTSVTITKVQ"
     gene            8071..9579
                     /locus_tag="U1021_000854"
     CDS             8071..9579
                     /locus_tag="U1021_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEM4711415.1"
                     /translation="MSHHHVLQNGSDIRGIAIATDEYAVNLTPQATQEVVRGLIHWLT
                     QKPELAQTYQKGQLTIGIGRDSRLSGPDLVAAFTEEAVRLGVQLIDFGMATTPALFMS
                     TQYPQFKCHAGVMITASHLPHYFNGIKIFSENGGAEHEDIDFILSSSEDLPASDLGSV
                     TKADLITPYAQDLVGKIRTACGGQEKPLTGLNIIVDAGNGAGGFFAEKVLAELGADTT
                     GSQFLDPDGTFPNHVPNPDNKEAMESIRQAVLKQGADLGIIFDTDVDRAALVTKSGEI
                     LNRNNLIAVLSQIVLAEHPGTSIVTNSPTTEHLKVFIESLGGKQIRYISGYRNVINRA
                     ILANQEGVDCQLAIETSGHAAFKENYFLDDGTYVAAKILMLLPKLQAEGKSLDDLIAQ
                     LKQPLETQEVRFKLEAAGYRALGEQVIADFRNTSLEGFAFNPENEEGVRFDLTELYGD
                     GWLLLRMSLHEPLLVLQVENDQTGHIPAVLRTLSAFLDQYPAVNQEKLKALI"
     gene            complement(9649..10719)
                     /gene="xerS"
                     /locus_tag="U1021_000855"
     CDS             complement(9649..10719)
                     /gene="xerS"
                     /locus_tag="U1021_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012658412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerS"
                     /protein_id="HEM4711416.1"
                     /translation="MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKE
                     YRRFFEWLQDSDLVSVERIADIPLDILEHLTKKDMEAFILYLRERPLLNANTTQNGVS
                     QTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
                     LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLD
                     LRDVNLNMMIIEVTRKGGKRDSVNVAGFAKPYLEAYMSIRQQRYKAEKTDTAFFLSEY
                     RGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDATKSQVLVSHQLGHAN
                     TQVTDLYTHIVNDEQKNALDQL"
     gene            complement(10885..11406)
                     /locus_tag="U1021_000856"
     CDS             complement(10885..11406)
                     /locus_tag="U1021_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM4711417.1"
                     /translation="MIIWLNGPFGIGKTTLANILHKRIENSYLYDPELLGDFLQHQLP
                     KTVCPEDFQDYSVWRRSTYKIVFDLATKTDKIIIIPMTIYKKEYYQEITQQLIQDKIP
                     LEHYILLADKTTILERLDNRVNEDNIWAKRHLDVCLKAFESHIPGQRLNTDSLKPEEV
                     AEEILMLSEFTKK"
     gene            complement(11472..12212)
                     /locus_tag="U1021_000857"
     CDS             complement(11472..12212)
                     /locus_tag="U1021_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3307 domain-containing protein"
                     /protein_id="HEM4711418.1"
                     /translation="MSFSVISSYLIQHPVLTALLIAHFLSDFTFQSQALADDKKLHLK
                     ALFMHLFIVSLPLLILALLTPVQNGDLFFQVWLSHLAIDYVKYFLNKHHWIKDSWEAG
                     AFLADQLLHVISIIILYHTIGVNVASHSLWIEPNYLLLQILFILLISKPVNILFKLYF
                     SKYQVAEGEEEQTVTGAGALIGQLECLIMGIFLLLGQYTAIGLVFTAKSIARYDKISK
                     SQAFAEYYLIGSLFSIISVLVLYVLLIL"
     gene            complement(12216..12884)
                     /locus_tag="U1021_000858"
     CDS             complement(12216..12884)
                     /locus_tag="U1021_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SatD family protein"
                     /protein_id="HEM4711419.1"
                     /translation="MNYIAIIGDIVNSKQTSNRSSIQERLKQQLNRINHSFAQDFASP
                     FTITKGDEFQALCKPNPYIFLIIDQIQLAFRDEVEIRFGIGLGEILTAIDPKLSIGAD
                     GPAYWEARKAIDFIHDNHDYGTSKIAFSSEYKQIDRVINPLLTSSDFIKAAWNRSQTD
                     LFETLISKKIYQEDFTQKPIAEKMKLSQSAFTKRLKSSGIKLYLRNRQTAMNLILQLS
                     QKEG"
     gene            complement(13078..14652)
                     /gene="ffh"
                     /locus_tag="U1021_000859"
     CDS             complement(13078..14652)
                     /gene="ffh"
                     /locus_tag="U1021_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000863601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEM4711420.1"
                     /translation="MAFESLTERLQNVFKNLRRKGKISESDIQEATKEIRLALLEADV
                     ALPVVKDFIKKVRERAIGHEVIETLNPAQQIIKIVDEELTAVLGSETSEIIKSPKIPT
                     IIMMAGLQGAGKTTFTGKLANKLKQEENARPLLIAADIYRPAAIDQLKTLGQQIDVPV
                     FELGNQVPALEIVRQGLEQAKANHNDYVLIDTAGRLQIDQALMAELREIKEFAQPNEI
                     LLVVDAMIGQEAANVAREFNDQLAITGVILTKIDGDTRGGAALSVRHITGQPIKFTGT
                     GEKITDIETFHPDRMSSRILGMGDMLTLIEKASKEYDEKKSLELAEKMRENTFDFNDF
                     IDQLDQVQNMGPMEDLLKMIPGMAGNPALANLKVDEREIARKRAIVSSMTPAERENPD
                     LLTPSRRRRIANGSGNSFVEVNKFIKDFNQAKTMMQGVMSGDMNKMMKQMGINPNNLP
                     KNMPNMNGMDMSALEDMMGGAGMPDMSQLMGGAGMPDMSQMFGGGLKGRIGEFAMKQA
                     MKRQANKIKKAKKKRK"
     gene            complement(14665..14997)
                     /locus_tag="U1021_000860"
     CDS             complement(14665..14997)
                     /locus_tag="U1021_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding protein"
                     /protein_id="HEM4711421.1"
                     /translation="MEIEKTNRMNALFEFYAALLTDKQMNYIELYYADDYSLAEIAEE
                     FQVSRQAVYDNIKRTEKLLEDYEMKLHMYSDYVVRSQIFDEMLNKYPEDAYLKEKIAI
                     LTSIDNRE"
     gene            complement(15100..15798)
                     /locus_tag="U1021_000861"
     CDS             complement(15100..15798)
                     /locus_tag="U1021_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003076949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM4711422.1"
                     /translation="MKAAYITIHDKIKEQIDNGIWKIGQRLPSERDLADEFGVSRMTL
                     RQGITLLVEEGILQRKIGSGTYVASTRVQEKMRGTTSFTELVQLQGKTPSSKLLSYTR
                     TKPNEKEVEQLGLSRGEYVIRMERVRYADNVPVVYEVASIPERLIKNVPKEDVTNHFF
                     KTLMDNGYRIGTSKQTIFARLANEKVAQYLQISKNQAILALKQVSYLEDGQAFEFVNS
                     QYVGERFEFYLENN"
     gene            16074..17624
                     /gene="guaA"
                     /locus_tag="U1021_000862"
     CDS             16074..17624
                     /gene="guaA"
                     /locus_tag="U1021_000862"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009880616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEM4711423.1"
                     /translation="MTKQDVQKIIVLDYGSQYNQLISRRIREFGVFSELKNHKITAEE
                     VRAINPIGIVLSGGPNSVYAENAFDIDPEIFELGIPILGICYGMQLITHKLGGKVVPA
                     GEAGNREYGQSNLQLKTESALFAGTPEEQLVLMSHGDAVTEIPADFHLVGLSADCPYA
                     AIENTERRIYAIQFHPEVRHSVYGNDILKNFAFGICGAKGDWTMENFIETEIEKIRQT
                     VEDKKVLLGLSGGVDSSVVGVLLQRAIGDQLTCIFVDHGLLRKNEGDQVMEMLGGKFG
                     LNIIRVDAAKRFLDLLAGVSDPEKKRKIIGNEFVYVFDDEASKLTDVEFLAQGTLYTD
                     IIESGTDTAETIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTALGMPDEVVWRQ
                     PFPGPGLAIRVMGEITEEKLQTVRESDAILREEIAKAGLARDVWQYFTVNTGVRSVGV
                     MGDGRTYDYTIAIRAITSVDGMTADFAKLPWDVLQKISVRIVNEVDHVNRIVYDITSK
                     PPATVEWE"
     gene            complement(17824..18873)
                     /gene="mcrC"
                     /locus_tag="U1021_000863"
     CDS             complement(17824..18873)
                     /gene="mcrC"
                     /locus_tag="U1021_000863"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methylcytosine-specific restriction
                     endonuclease system specificity protein McrC"
                     /protein_id="HEM4711424.1"
                     /translation="MIPVQNIYYMLSYAFKILHKQEYKRIATEEFKNIADLLAEIMII
                     SLSIQVKRGLGREYRSQTESLSALKGKINISDSLTPPNWRRKQLVCQYDDFSLDSTMN
                     RIIKASIEILLKADISRDRKKKLRKLLVFFGEVSKINLHSINWNLQYNRNNQSYQLLM
                     SICYLVVNGLIHTEREGNKKLMNFLDERRESLLYEKFILGYYKKHYPQIQVTASQIPW
                     ALDDGFGEMLPIMQSDIYLKYKDTILIIDAKYYSSNTQIRFDKRTLHSNNLYQIFTYV
                     KNQAYRLSDSNDTVAGMLLYAKTDIDIQPNQVYQMHGNQISVKNLDLNLQFASIAEQL
                     DNIITSHFVSPPKRY"
     gene            complement(18870..20555)
                     /locus_tag="U1021_000864"
     CDS             complement(18870..20555)
                     /locus_tag="U1021_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM4711425.1"
                     /translation="MDEQNQFNWVNFYKEFAWKLVDYKDNRAELVEKVKAIYTKTKIH
                     MPTLEKDNQLMDIDPFTIFGLFNKRITEENRIKILTAIAELFHLQAEIPSSFESIPVL
                     NNQNATFYYFIGDRDENDIDDLWELFIAALTYSKEPTAEKKEKFSHYFDLAINKKGNG
                     NSKITMALYWIAPDFFLNLDSQNETYVYESGEIPADIVQKLPKMKSKISADEYFDISD
                     SILQYLKSAESKLKNFKELSSMAWKYNQEEKKRSAGAISPLAEEADTGNEIGSEDVVE
                     DSYTKNHFLSEVYMTEEEYDQLTSILQMKKNIILQGAPGVGKTFVAERLAFSLMGKPD
                     LERVMTIQFHQSYSYEDFIMGFRPSTSGFELRRGAFYTFCKKAESDKNHDYFFIIDEI
                     NRGNLSKIFGELFMLIENDKRGKSLQLLYSDVQFSIPENLYIIGMMNTADRSLALLDY
                     ALRRRFAFFDIKPGFSTAGFKDYQTNLKNEKFDRLISCVEKLNQAISTEEVLGDSFCI
                     GHSYFCGLSAEVLDQGLLEAIVEYELIPLLKEYWFDEPTKIHDWSSKLRSAIQ"
BASE COUNT         6017 a         4081 c         4256 g         6499 t
ORIGIN      
        1 caaagagaat cgaagaaaag gtattctcag aaaaagaaaa gtctgaactc ttggaacaag
       61 ccgtattctt agaagagctc gcccatgatt tgcaaagtat aagatttatg gcatactaga
      121 gggaggaaac tatgaaaaag aaagtatttg gcttgctggc tttgggcagt ataatgctaa
      181 ccgcttgttc tacctcttca gcaggcctta gctttgaaga gggttatcaa attttccatt
      241 acaagggaaa agactatgcc gttagcaaac aggaagttgc cgaagatagt attcaaggaa
      301 cagaagttaa gtttatggaa tggcctgttg tcaaagaaga gggttcagtg aaaaagacag
      361 tatccttaaa taatctctat gtaaccacta acaaggaatg ggccatcggt gtccaggatg
      421 gttactataa ggtagattta gaagaaaatg ttgctgaatc agaccgaatc gactatcaaa
      481 gtgtacttga gaatgttgat tttacttaag aaatcaatta ggagtttata tgttattaga
      541 aatcaatcat ttaaaaaaag tttacaaaga cgttaccact gttgatattg aaaagattac
      601 tgtacgagaa ggagaaatct acggctttct tggaccaaat ggtgcaggta agacaactac
      661 gatgaaaatg attctatcac ttgtcactcc gacttcaggt gaaattttta ttaataaaaa
      721 agacattcga aatgacaaaa aatacctaaa tcagattgga tctatgatag aagaaccgtc
      781 ctattatcct aatttaactg gatatgaaaa tttattagtg tttcaaaaaa tggtgggatt
      841 tgataaaaat aatatccggc caacattgga gctcgttgga ttagctgatg aaaaaaatcg
      901 aaaaaaatta gttaaggcct attctcttgg tatgaaacag cgacttgcct tagcatttgc
      961 tttagtgaaa aagccgaaaa tcttattatt agatgagccc acaaatggtc ttgatccagc
     1021 tggtattcat gaaattcgtg aattaattgt tcaattagcc aaagaaaaag gtctgactgt
     1081 ctttatttcc agtcacattc ttccggaaat tgaacacatt gcagatcgag ttgggattat
     1141 caatcatggt cgtcttgtct atgagggaga aattgaagct attaagtcaa atacttggat
     1201 tgaaattggc ggtgattttt cacagaaaaa tattgttcag accttagttg aacttggaac
     1261 ggtagaaatt ttgagtgcat ccgaaagtca agtaacttta agggatttgg ataacgatcg
     1321 gttagcagat ctggtgagct atttaataga aaatggatac cgaatattcc gagtggttag
     1381 agaaagtgaa actcttgaag atattttcct aaatctaaca aaggaggcgt aagatgaatg
     1441 gtgtttacat tgaatggcta aaaagtagac gaacaaaatc tatttcaatt gtcattattt
     1501 tgatgttggt tgccacactt tggaatattg caacttttat ctctgctttc tcttcacatc
     1561 cagagttaag aatggctgga accttgttta gtaatcagaa tgtcgatcta cttatgttcc
     1621 cgattgcagt ttgtgtgttt gctagtcgaa ttgtagggaa tgaacatgaa gggcagacct
     1681 ttaaactaca aatagctaat ggtcaaagcc taacagccat ttttcgtgat aaattctttt
     1741 ttatgctggt ttcctttgtt attatgtctg ctatcgaaat tatgattatt tatcttttcg
     1801 gaacacaggc aggaatctct atttctttgc agattattgg tattcagttt attgggcaga
     1861 tacttgcaat attttcattg atttgtcttt atctgacctt ggccatgatt cttgaaaagc
     1921 aggggattct gctagcacta ggacttttag gtggttttct aggaattatc ttaaacccaa
     1981 aaagttatgg ttttaccagt ttacttaacc caatcactgg ttcaggaagt cttgcgcctt
     2041 ataaatatca atttctgggt gacggcacaa ttacctataa tttagatagt cagttgcttg
     2101 agaaaatcgt ctgttatgcc atttactgct tgatactcta ccttttggcg gttctaatat
     2161 taagaaagaa agggaactaa gatgaaagat tacttcttag ctgagtggac aaaaacaagg
     2221 aaaattcaat tattagtcat tgggattgcc tttttgagtt tctctagtat gataggattg
     2281 ggtatctatt ttgctaatcg tgatgtttta atcgacggaa ctcaatcttt ggttctgtgg
     2341 ggacaactga ccttttacaa tagtacctta ctttatcctc ctatgttagc cattattgca
     2401 ggtctcttat tagttcctga atttgagcga aaaactcttg acatgctaaa ggctaatcaa
     2461 gtttctatga ggaaattata tttaggaaaa ttaatgagca gttttcttct tattcttcca
     2521 attcaactct tattgctgct gatttttata gttgcggcaa aaattgacgg catttcattt
     2581 gaccttagtt tagccacaca tgttaaatgg attgctttat cgcttttgtc ttcctttcca
     2641 attattacac tccaatccta tatcactgta aaaactcgaa atttcagtaa gggagtcggt
     2701 gttgctacca ttggtagtat gcttaatttt gtattaattt ttatcaatga aagttttacg
     2761 aaatttttcc cttactctca accgatgatt ggattacgga gtagggcatt gcaagatatg
     2821 acatttttag agtttatctt atttattaca gtgaatattg tgtttagttt tattttttat
     2881 cagttaacta tcaagaattt ggaaaatagt aaataaaaac cttttacaat ttcatgtatt
     2941 tcttttataa agctgataat tagaaactca atttcatggg atttagtacc aaagaaaatt
     3001 agctatacta aatcaagtta attttgctaa agaaaacaat taggagtaac tatgttatta
     3061 gaaatcaatc atttagaaaa agtttaccgc acgcgctttt caaaagagga aactcgtgcc
     3121 ttgcaagatg tggattttaa ggtagaagag ggcgagttta tcgctatcat gggggaaagt
     3181 ggttctggta agacgacttt gctcaacatt ctagcaaccc tggacaagcc gacgaggggc
     3241 tctgttatct taaacaatca agacatcacc aaaatcaagg aaagcaagct ggcagatttc
     3301 cgtttgcgta atcttggctt tgtcttccaa gattttaacc tcttggacac cctgtccatc
     3361 caagacaata tctttttacc tctggtattg gcacgtgaga gctatcagga aatggagaaa
     3421 cggttggaag tattggcacc aaaactacgg attcaagatt tgctgaaaaa acgtcccttt
     3481 gaactttctg gtggacaaaa gcagcgcgtg gctattgctc gtagtttgat tacccagcca
     3541 cagattgtcc tagcggacga accgacggct gccctagatt atcgcaattc ggaagacttg
     3601 ctgaatttgt ttgaagagat taaccgtgac gggcaaacta ttctcatggt gacccactcg
     3661 gccaacgcag ccagccacgc caaacgtgtc ttgtttatca aagatggtcg tattttccat
     3721 caactgtaca aggcagacaa gagcaatcaa gactttgcca aggagatttc actcaatatg
     3781 tctgcacttt tagggggtga gtagatgttt tacctcaaac ttgctgggca aaatatccga
     3841 aaatccatgg gtgtttttgc tcccttcgtt ttagccagtc tggtcctctt taccctgatt
     3901 tgttccatgt tcttgatcat gctgagtcca gttatgaaga ccatgggctc tggtgccatt
     3961 tctatcggtc ttggtgtgat tattctgacc attttctcgg tcattatgga gatttatagt
     4021 tttaatttcc tgatgaaaca acgggcgaga gaatttggtc tctataacat gctggggatg
     4081 aacaagaaaa aagtagcctt gatagctagc ctcgaattga tgatgatttt cttgctagtt
     4141 gtggttcttg gttctgtttt agctggtgtg tttgcaaatg ttctctactt gatttttgtc
     4201 aatataacac attatagtga tttacatttt ggaattgagc ctctggcctt tgtcatgact
     4261 gcctttctct ttgctggttt cttctttctc ttggaattgc tagccattcg gaccattggc
     4321 aagaccagtc cgctgatttt gttccgagct agtgaaaaag gagagagaga gccgaaagga
     4381 aatgttcttc tagctgctct tggtgttttt agtcttggga tgggctacta cctatcgctt
     4441 tcatcgaaag cagaaggtct agctgttatc tatcggttct ttatcgctgt gctctttgtc
     4501 attgcgggga cctatctgtt ctacatcagt tttatgactt ggtatttgaa ggctcgtcgg
     4561 aaaaacaagc ggtatttcta tacgccagag catttcatta cgacatcgca gatgattttt
     4621 cggatgaagc agcacgcaac gggtttggcc aatattacgc tacttgcggt catggccttt
     4681 gttaccattg cgaccacaac ctccctttat acaggtatga gcagtatgac aggtgtacta
     4741 tatcccaagg aaacatctat tacctataaa gtttcgtata gaagtcaagg tgtagctgcc
     4801 tatcagcaat cggtgctcag ccattttcca gaaaaagcca atgacaatct atcctatctg
     4861 acctaccaag caggtttggt ctatgatggt gggagcgata ttgtcatcaa tccagaaacc
     4921 attgccaatc cagactttag caaaatggcc tttacctact tcatcaccca agatgatttc
     4981 aggaaattgg ggaatgacct gccagagctg gctgccaatc aagttgcctt tatgcgtccg
     5041 agtgaaatgc cgtcgcttaa gaagcttgtt ttgggcgatc aaacctttga gaatgtagcc
     5101 aatcttgacc aggctatttt cccagacatc accaatacgc taaatgccgc cgttatggta
     5161 gtcagtgatg acactgtgtt ggatgctgtt cgtgagtatt acgagtccaa taatccgcaa
     5221 gggtatacag tcagtctgga ctaccgtgtc tttaccgact tgactgatga agaggttgct
     5281 tcgattggtc aacaaactgg cgactcttat aatatcaacg atgcaaacgg agaattccta
     5341 ggatatgcta tgcaaaaatc agattttaac aatttactga tgggctttac aggcagtttc
     5401 ctctttacag gtttcttgct gggcattagt ttcctacttg gtgcagcctt gattatctac
     5461 tacaaacagt actcggaagg acatgaggac aagaaatcct acaagatttt gcaggaagtg
     5521 ggtatgagcc agcaggctgt taagaaaacc atcaactctc aaacactctt ggtcttcttt
     5581 atgccactgg ctatggcgac cctgcacttt atcgtcgcac tagtcatgct caagcaaatg
     5641 ttgatggtgt tcggtgtagt ttcttccagc atgatttata cggttagtgg tattactttg
     5701 cttgctgttg tcctcatcta ctttgtcatt tacaagtgga ccagccgaac ctattatcgt
     5761 attattgaac gatagcagaa gtctcgcctt gtgcgagatt tcttgctttt tcagggaaat
     5821 ggtgttacaa tggtaatacc aaaggaatac tcaaagaggt aagaaaatgg cagctattac
     5881 attgaaagtt tctgagcagg acaagctctt tatgcaggct atggcaaagt ttgaaggtgt
     5941 cagtttgtca gaactcattc ggactaaaac ccttgaagcc cttgaagacg agtacgatgc
     6001 gcgtgtggca gacgttgctt gggcagaata ccaagcagac ttggcgaata gaattgagcc
     6061 gatgacatta gaacaaatgg ctgaggagtt gggcattgag ttataaggtt attttgtctg
     6121 ctaaggccca aaagcaaatt cgaaagatgg ataaaaccgc tgcaagtttg attttgcgct
     6181 atctctacaa gcatattgac ggttgcgaca accctagaca atacggaaaa gccttgactg
     6241 ctaatcgttc tggccaatgg cgctatcgta tcggcaatta cagggttatc gttaatattg
     6301 aagatgataa attgattgtg acaagcataa aaatgagaaa tggaagtata taagccaaga
     6361 cctgtgtcct ggcttttgca gaatgaagaa gatgaaaaaa gagaagattt atattgttga
     6421 agatgatgag atgattgtcc agctcttgaa gcagcatttg ggaaaatcgt atcaggtgga
     6481 aagtgtgcag aatttccgag ctgtcagtca ggaagtcgct gaaatcaaac cagacttggt
     6541 gctgatggac attagcctgc cttattacaa cggtttttac tggacgacag aaatccgtaa
     6601 aaccatgacc atgcccatta tctttatctc ctctagcgat gatgagatga atgcggtcat
     6661 ggccatgaac atgggtggcg atgtttttgt gtctaagccg ttttctctgg ggattttgga
     6721 tgccaaaatc ggcgccttct tgcgtcgggt taatcaattc agcaaatcaa ctgatttgtc
     6781 aattgaccag ttccaactta gtttagacgg gcgattttca aacgaattgg aacaggttca
     6841 attgtctcct acggaaacca agattttgtc cgccttacta gaaagacaag ggcagattgt
     6901 cagcaaggaa gaactcctgg aaaaactctg ggaaaatgaa gaatttattg accagaacac
     6961 gctcaatgtc aacatgacca gactgcgtaa gaaggtgagc gaagtcgggt ttgaacgaat
     7021 tcatacggtt cgtggcgtgg ggtacttggt caaatgatag caaaatttat ccgtgaatac
     7081 cggagttttt acttctccta cattgttctg gctactagtt ttatcttgct tttctttctc
     7141 tatcaactgc ccaccgaatt cctgcaaaac gctctgctat tgtccctaac ccttttaatc
     7201 ctactgactg tagggctttt ctggaagttt cgcaaccgca tgagagcctt ggaagactat
     7261 gttcatgagg aagccttgcc cttgctcaat aagcctgtgg accttgccta tctcaacttg
     7321 attgaagcgg agaaggaggc gacacgagag cagcttttgg tctataagtc acgagaagag
     7381 gacctgcaag ccatggtcaa aatgtggtcc caccagatga aagtgcctct ggctgccctg
     7441 tctttgatga gccagactga caatctcaac cagcaggatg tcaatcacca gctcttacgc
     7501 ttggacaatt atatggcaaa tctcctcaac tacctcaagc tgaccaacca tgccagcgat
     7561 tttcgatttg agcaggtgga agtaagagaa gtggtggtgg atttggtcaa aaaataccgc
     7621 aatcagttct tacaaaaaga catttcagtg accatcgatg gaaattggct actgaagtcc
     7681 gacagaaaat ggctcagctt tgccttgtca cagataatcg acaacgccct caagtacaat
     7741 aagactggtg gaaaggtagc cattgaactg aatgagggaa tttccatttc cgatacggga
     7801 attgggattc tggcagaaga tattccacgc ctgtttgacg agggatttac aggttttaat
     7861 ggccgagaac accaaaaagc gacaggattt ggattgtatc tgaccaagcg ggtcctgaat
     7921 cagttggaac tagctatttc cgtggaaagt caactggaag ttgggaccag cgtaaccatc
     7981 acaaaagtac agtagaagct gtgctttttt cattttgaaa ccgctttgaa aatatgatat
     8041 actaaattta gtttgaatta ggaggttact atgtcccatc atcacgtctt gcaaaatgga
     8101 tcagatattc gtggaattgc tatcgctaca gacgaatatg ctgtcaatct cactccgcaa
     8161 gccacccagg aagtagttcg cggacttatt cattggctaa ctcagaagcc ggaactggcg
     8221 cagacctatc aaaaaggcca attgaccatc ggtatcggtc gagacagccg cctcagcggt
     8281 ccagatttgg tcgcagcctt tacagaagaa gccgttcgtc tgggcgttca gctgattgac
     8341 tttggtatgg ctaccacgcc agctctcttc atgagcaccc agtatcctca gttcaagtgc
     8401 catgctggtg tcatgatcac tgccagccat ctgccgcatt acttcaacgg cattaagatt
     8461 ttttcggaaa atggtggagc agaacatgaa gatattgact tcatcctctc cagtagtgaa
     8521 gacttgccgg cttctgacct tggaagtgtg accaaagcag atttgattac gccttatgcc
     8581 caagacttag ttggcaaaat tcgtaccgcc tgtggtggac aagaaaaacc actgacaggt
     8641 cttaatatca tcgtcgatgc tggaaacggt gcaggcggat tttttgctga gaaagttttg
     8701 gcagaattgg gagcagatac cactggttca caattcctag acccagacgg caccttccca
     8761 aaccatgttc caaacccaga taacaaggaa gctatggaaa gcattcgtca ggctgtcttg
     8821 aagcaaggtg cagacctagg cattatcttt gataccgacg ttgaccgtgc cgccctggtt
     8881 accaagtcag gagaaattct caatcgtaac aacctgattg ccgttctcag ccagattgtc
     8941 ctagctgaac atccaggaac cagcattgtg accaattccc caacgactga acaccttaag
     9001 gtctttatag aaagcctggg aggcaaacaa attcgctata tttcaggcta ccgtaatgtc
     9061 atcaaccgtg ctattttagc caatcaagag ggagttgatt gccagttggc tatcgaaaca
     9121 tctggacatg ctgcctttaa ggaaaattac ttcctcgatg acgggaccta tgtagcggct
     9181 aagatcctta tgctcttacc aaaactgcaa gcggaaggca agtccttgga cgacttgatt
     9241 gcccagctca agcaaccact tgaaacccaa gaagtacggt tcaaactaga agcggcaggc
     9301 tatcgagcac ttggtgaaca ggttattgct gatttcagaa acaccagcct cgaaggcttt
     9361 gcttttaacc cagaaaacga agaaggagtg cggtttgacc tgactgagct ttatggtgac
     9421 ggctggctct tgctccgtat gagtctccac gagccactct tggtcttgca ggtggagaat
     9481 gaccagactg gacacatacc tgccgtttta cgaactctct cagccttttt ggaccagtac
     9541 ccagctgtca atcaggaaaa attgaaagca ttgatttaga tttaagagaa aaaggggtaa
     9601 gttttcgctt actccttaat ttatttacat aattaatatt acgtaacact ataattgatc
     9661 cagtgcattt ttttgctcat cattgactat atgggtgtag aggtcagtga cctgagtatt
     9721 ggcgtggccc agctgatgac tgaccagaac ttgcgacttt gtggcgtcgt ataggcgagt
     9781 tgccaaggta tgacggagtt tgtggggggt tacgcgtatc ttgaagtccg cagagtactt
     9841 ggcaaccatt ttttcaatag aagaagcatc gatacgattg ggtagaccac ggtattcgga
     9901 caggaagaag gccgtatccg ttttttcagc cttgtagcgt tgctgacgga tgctcatata
     9961 ggcttccaga tagggcttag caaacccagc cacattgacc gagtcccgct taccaccctt
    10021 acgggttact tcgataatca tcatattgag atttacatct cgaagatcca aattcaccgc
    10081 ttctgacaga cggacgccag aagccaagag aagtgccaga atcgccaaat ctcgctcctt
    10141 atttttctgg aaagaggaga gggcacgttt agagagattg acttggtatt ccttgtccac
    10201 atagtccaag aactccatgg tttcatcgcc caaaaagagc ttttgcttga tgttctcagc
    10261 ccgcgctgcc aaggtttcct tcttcttctt ggtagatacc tttttcatga cattgcggta
    10321 gaagtagggc tcgccctgct cattttccac ttcttcggtt aaatacttga agagactaga
    10381 aagagccgac agggtacggt taatggtggt ctgcgacaca ccattctgcg tggtattggc
    10441 gttcagcaag ggacgctccc gcagataaag aataaaggct tccatatctt tttttgtcaa
    10501 atgttccaga atatccaaag gaatgtcagc aatccgttcc acagatacca aatccgaatc
    10561 ctgtaaccac tcaaagaatc gacggtattc tttcaagtat tcatataagg tagtaaaact
    10621 gtaaggcaca gccaattttg actgataata ttccagaaca aaccaaggca taatttcttt
    10681 tagttgatca attttttcta gtaataactc gcgtctcatc attttctcct gattttagct
    10741 atatgagtag tatagcataa tcttacataa gtttcaagaa aattatagtt tttcggaaag
    10801 atgtttgtgg ggatatcaga gggataacca aaaaacataa ataactggaa atttttttca
    10861 cacccaaaat cccaaaagtc tacattattt cttggtaaac tcacttagca ttagaatttc
    10921 ctccgcaacc tcttctggct tcaaactgtc tgtgtttaac ctttgccccg gaatatgact
    10981 ttcaaaagct tttaaacaaa catcaagatg tctcttggcc cagatgttgt cttcattgac
    11041 tcgattatct aaacgttcca aaatggttgt tttgtcagct aacaaaatat aatgttccaa
    11101 aggaatctta tcctgtatca attgctgagt aatctcctga taatattctt tcttatagat
    11161 tgtcatggga ataataataa tcttatcagt tttagtcgct aaatcaaata ctattttata
    11221 agtactccgt cgccaaacgg aataatcttg aaaatcttca ggacatacag tcttaggtaa
    11281 ttgatgttgt aagaaatcac ctagtaactc gggatcatag agatatgagt tttctattcg
    11341 tttgtgtaat atatttgcta aagtagtctt tccgataccg aatgggccat ttaaccaaat
    11401 aatcatatag tattcctttc tatttttata ataaaagttt acacaaaata aattatgtaa
    11461 acttttttct tttataaaat cagtaaaacg tacaatacta ggacactaat gatactaaat
    11521 agcgaaccaa ttaaatagta ttcagcaaag gcttggcttt tggatatttt atcatagcgt
    11581 gcgatggatt ttgctgtaaa taccagcccg atagctgtgt attgccctag aagtagaaaa
    11641 atccccataa tcaagcattc taattggcca atcaaggctc ctgcacctgt cacagtctgc
    11701 tcttcttctc cttccgctac ctgatatttg ctaaagtaga gtttgaaaag aatattgacg
    11761 ggcttgctga tcagaaggat aaaaaggatt tgcaggagga gataatttgg ttcaatccag
    11821 agtgagtgtg aagcaacatt gacaccgata gtgtgataaa gaatgatgat agagatgaca
    11881 tgtagcaatt gatcagctag gaatgctcca gcttcccagg agtcctttat ccaatggtgt
    11941 ttgttgagaa aatatttgac atagtcaatc gcaagatggc tcagccaaac ttgaaaaaat
    12001 aaatctccgt tttgaacggg ggtaagtaag gctagaataa gaagagggag agaaacaatg
    12061 aaaaggtgca tgaaaagagc tttcaaatgc agttttttat catccgccag tgcttgactt
    12121 tggaaggtaa aatcacttaa aaagtgggca ataagcaagg ctgttaaaac tggatgttga
    12181 ataagatagc tagaaataac tgaaaatgac atgctttatc cttctttctg actgagctgg
    12241 agaatcaaat tcatggcagt ttgacgatta cgcaggtaga gtttgattcc gctggatttc
    12301 aaacgtttgg taaaggcgct ttgactgagt ttcattttct cagcaattgg cttttgtgtg
    12361 aaatcttctt gatagatttt tttggagatt aaggtctcaa acagatccgt ttgcgaacga
    12421 ttccaggcag ctttgatgaa atcgctagaa gttagcaagg ggttaatcac acgatcgatt
    12481 tgcttgtatt cagatgaaaa tgcaattttg ctggtgccat agtcatggtt gtcatgaatg
    12541 aagtcaatag ccttgcgtgc ttcccaataa gctggaccat ctgctccaat acttagcttg
    12601 ggatcgatag ctgttagaat ctcacccaaa ccaattccaa atcgaatctc cacctcatca
    12661 cggaaggcta gttggatttg gtcaattatt aaaaaaatat aagggttagg cttgcataag
    12721 gcttgaaatt catctccctt tgtaatggta aatggtgatg cgaagtcctg agcgaaggaa
    12781 tgattgattc tattcagctg ctgttttagc cgctcttgaa tactagagcg gttggaagtt
    12841 tgttttgaat tgacaatatc tcctattatt gcgatataat tcataacttg tcctctgatt
    12901 cctattatat ttccattata acggacaata taaagattgt ccactaaaaa ggacattttt
    12961 gaatatttcc gttataacgg aaaatgttgg ggttcaaaaa tcatttttcc tgctttgcta
    13021 cttctatttt acattgctgt atcttacttc ttcgaataaa aagtaaaaaa gaagagatta
    13081 ttttctcttc tttttggctt tcttgatttt attggcttgg cgtttcatgg cttgtttcat
    13141 agcaaactcg ccgattctac ctttcaaacc gcctccaaac atttgggaca tatctggcat
    13201 accagctcct cccatcagtt ggctcatatc aggcatgcct gcaccaccca tcatatcttc
    13261 cagagcagac atatccatac cgttcatgtt tggcatgttt ttagggagat tatttgggtt
    13321 gattcccatt tgtttcatca ttttgttcat gtcgcctgac atgacaccct gcatcatggt
    13381 tttcgcttgg ttgaaatcct tgataaattt attgacttcg acaaagctat ttccagaacc
    13441 gttagcaata cgacgacgac ggctcggtgt caacaaatca ggattttctc gttcggctgg
    13501 tgtcatagaa gatacgatag ctcgttttct tgcaatttca cgctcgtcaa ctttcaagtt
    13561 ggcaagtgct gggttaccag ccataccagg aatcatcttc agcaggtctt ccattggtcc
    13621 catattttga acttggtcca gctgatcaat gaaatcgttg aaatcaaagg tattctcacg
    13681 cattttttca gcgagttcta gtgatttctt ctcatcgtat tctttgctgg ctttttcaat
    13741 caaggtcagc atgtcaccca tgcccaaaat acgcgaggac atacggtctg ggtggaaggt
    13801 ttcaatatct gtgatttttt caccagtacc ggtgaatttg attggctgac cagtaatgtg
    13861 acggacagac aaggctgcac caccacgtgt atcaccgtca atcttggtca aaatcacacc
    13921 agtaatagcc agttgatcat tgaactcacg cgcaacgttg gcagcttcct gaccaatcat
    13981 ggcatcgacg accaagagga tttcgtttgg ctgagcaaac tctttgattt ctctcaattc
    14041 ggccataagg gcttggtcaa tctgcaaacg accggccgta tcaatcagaa cgtagtcatt
    14101 atgattagct ttggcttgtt ctaaaccttg gcgtacaatc tccagggcag ggacttgatt
    14161 gcccaactcg aatacaggta catcaatttg ttgaccaagg gtcttcaact ggtcaatggc
    14221 agctggacga taaatatcgg cagcaatcaa gagtggacgg gcattttctt cctgcttgag
    14281 tttattagct aacttacctg tgaaggtcgt tttaccagcc ccctgcaatc cagccatcat
    14341 aatgatagtt ggaatttttg gtgatttgat aatttctgaa gtttcagaac ctaatacagc
    14401 cgtcaattct tcatcaacga ttttgatgat ttgttgagcg gggttcaggg tttcaatgac
    14461 ttcgtgacca atggcacgtt cacgtacttt tttgatgaaa tcttttacaa ctggaagagc
    14521 aacgtcggct tctagtaagg ccagacgaat ttccttggtt gcttcctgaa tatcactctc
    14581 agaaattttt cccttacgac gcagattttt aaaaacattc tgtaaacgtt ccgttaagct
    14641 ttcaaaagcc atatacttct cctcttactc tctattatca atactggtta gaatggcgat
    14701 tttctccttc aaataagcat cttctggata cttattcagc atttcatcga aaatctgact
    14761 acgcaccaca tagtcagaat acatatgcag tttcatctca taatcttcca gtaatttttc
    14821 tgttcgttta atgttatcat agaccgcctg acggctgact tgaaattctt cagcaatctc
    14881 agccaaacta taatcatcgg cataatagag ctcgatgtag ttcatttgct tgtctgttag
    14941 caaggctgca tagaattcaa ataaggcatt cattcggttg gttttttcaa tttccataaa
    15001 ctttattata tcaaaaattc catattttat aaataagaaa atccgtcatc actagaaaga
    15061 ttacggattt taaaaatgtt ttacataatt atttttatgt taattgtttt ctaaatagaa
    15121 ttcgaaacgt tccccaacat actgactatt tacaaattca aatgcttgac catcctcgag
    15181 ataagatacc tgttttagtg cgagaatagc ctggttttta gaaatttgta aatattgagc
    15241 cactttttcg ttggctaaac gcgcaaaaat ggtttgtttg ctcgttccaa ttcgataacc
    15301 attgtccata agtgttttaa agaaatggtt ggtaacatct tcttttggga cattttttat
    15361 caagcgttca ggaatgctgg caacctcata cacgacggga acattatctg catagcggac
    15421 ccgctccatt cgaataacat actcgccacg ggataaacct aattgttcaa cttctttttc
    15481 attaggtttg gttcgcgtat aggacaataa tttgctgctt ggcgtctttc cttggagttg
    15541 tactaattca gtaaaggaag tcgtgcctcg catcttttct tgaacccgtg tactggcgac
    15601 ataagtaccg gaaccaatct tgcgttgtag aataccttct tccactaaaa gtgtgattcc
    15661 ttgacggagc gtcatacgag aaacaccaaa ttcatctgct aaatcgcgtt cacttggtaa
    15721 acgttgacca attttccaga ttccgttatc gatttgttcc ttaattttat cgtgaattgt
    15781 gatatatgct gctttcattt atctagcctt tctcttcttt ctagtttacc aaaaataaag
    15841 gcgtttggct aattcaggcc acactctatt ggtaaaattc tcctaggcaa acaatgaagt
    15901 cagattacct aaaataaagt gagtaaaaac aataaaaata cgaacactaa catttttatt
    15961 atcactcata gtttgcaaaa cagatattta acaaataaaa tttggaaaat gttcgctttt
    16021 atgttaaaat aactactagt atttgaattt ttttcaaaac gaaagggaaa aacatgacaa
    16081 aacaagatgt ccaaaaaatt attgtattgg attatggtag ccagtacaac caacttattt
    16141 cacgtcgaat tcgtgaattt ggtgtctttt cagaattgaa aaaccataaa attacagctg
    16201 aggaagttcg tgctatcaat ccaattggta tcgttctttc aggtggacca aactctgtct
    16261 acgcagaaaa tgcctttgat attgatccag aaatctttga attgggtatt cctatcttag
    16321 ggatttgcta tggtatgcag ttaattaccc ataaattggg aggtaaggtt gttcctgctg
    16381 gtgaggctgg aaatcgtgaa tatggtcaat caaatcttca actgaagact gaatcagcgc
    16441 tttttgctgg aacaccagaa gaacagcttg tactcatgag ccacggggat gctgtaactg
    16501 aaattcctgc tgatttccac ctagttggtc tgtctgctga ctgcccttac gcggccattg
    16561 aaaacacgga acgccgtatc tacgctatcc agttccaccc agaagttcgt cattccgtat
    16621 atggaaacga tattttgaaa aactttgcgt ttggtatctg tggagccaaa ggtgactgga
    16681 caatggaaaa cttcatcgaa acagaaattg aaaaaatccg ccagactgtt gaggacaaga
    16741 aagtcttgct cggtttatca ggcggtgtgg attcatctgt tgttggtgtg cttcttcaac
    16801 gtgctattgg tgaccaattg acctgtatct tcgttgacca cggacttctt cgtaagaatg
    16861 aaggcgatca ggttatggaa atgttgggcg gtaaatttgg cctcaatatt attcgcgtcg
    16921 atgctgctaa gcgtttctta gacctacttg ctggcgtatc tgaccctgag aagaaacgta
    16981 aaatcatcgg taatgaattt gtttacgtat ttgacgatga agcgagcaag ttgactgatg
    17041 ttgaattcct agcgcaagga acactttata ccgatattat cgagtcagga acggatactg
    17101 ctgagacaat caaatctcac cacaacgttg gtggtctgcc agaagatatg cagttcaagt
    17161 tgattgaacc gctcaatact ctctttaagg atgaagttcg tgccctcggt actgctcttg
    17221 gtatgccgga tgaagttgta tggcgccaac cattcccagg accaggcctt gccattcgtg
    17281 tcatgggtga aatcactgag gaaaaacttc aaactgttcg tgaatctgac gctatcttgc
    17341 gtgaggaaat tgcaaaagcg ggtcttgccc gcgatgtgtg gcaatatttc acggttaaca
    17401 ctggcgttcg ctccgtaggt gtcatgggag atggtcgtac ctacgactac accatcgcca
    17461 tccgtgctat cacttctgtc gatggaatga cagctgactt tgccaaacta ccatgggatg
    17521 ttcttcaaaa aatttctgtc cgtatcgtaa acgaagtcga ccacgtcaac cgcatcgtct
    17581 atgatataac aagtaaacca ccagcaacag ttgagtggga gtgatagagc ctggggagag
    17641 gctctatcag ctagtctatc aagactgttt tacccgacgc ttaaaaataa aaaagcgtcg
    17701 ctgatctggg aaatcaatta accagacgct ccaaaatagg aaagagtctt ataaaaaaac
    17761 aatcaaagag tagtttagtg ctactacttg attgtttttt tgttttctag cttaaagctc
    17821 taactagtac cgttttggag gggatacaaa atgcgatgta atgatgttat ccagttgttc
    17881 agcaatactt gcaaactgca ggtttaagtc caaatttttg acactaatct ggtttccatg
    17941 catttggtag acctgattag gttgaatatc tatatcggtt ttagcgtata gaagcattcc
    18001 tgctactgta tcgtttgaat ctgacaggcg ataagcctgg tttttcacat aggtaaaaat
    18061 ttggtataga ttatttgaat ggagtgtgcg cttatcaaag cgaatctgtg tgttactaga
    18121 ataatattta gcatcaataa tcaatatagt atctttatat ttgaggtaaa tatcactctg
    18181 catgatgggg agcatttctc caaaaccatc atctagtgcc caaggtatct gagaggcggt
    18241 aacctgtatt tggggataat gctttttata atatccaaga atgaacttct catatagcaa
    18301 ggattccctt cgctcatcaa gaaaattcat caatttctta ttcccctccc tctctgtatg
    18361 aattaatcca ttcaccacca aatagcagat tgacattagt aattgatacg actgattgtt
    18421 tcgattatat tgtaaattcc aattgattga gtgcagatta attttcgaga cttctccaaa
    18481 gaaaactaag agttttctca atttcttttt cctgtccctg cttatatcag cttttagcag
    18541 tatctcaatg cttgctttga taatgcgatt cattgtactg tcaagagaaa aatcatcgta
    18601 ttggcaaaca agttgctttc tacgccaatt cggaggtgtt aaagagtcag agatatttat
    18661 tttaccttta agagccgaga gtgactcggt ttgagaacga tactctcgac caagtcctct
    18721 tttcacctgt atcgagaggc tgattatcat tatttccgcc agtagatctg caatattttt
    18781 aaattcttca gtagcaatcc gtttatattc ctgcttatga aggattttga atgcgtagga
    18841 tagcatatag tagatatttt ggacaggtat cactggatgg cactccttaa cttactactc
    18901 caatcatgaa tttttgtcgg ttcatcaaac caatattctt tcaagagagg aatcagttca
    18961 tattcaacaa tggcttctag caaaccttgg tccagtactt ctgccgataa accgcagaag
    19021 taactatgcc caatacagaa gctatctccc agtacttcct ctgttgaaat ggcctgattt
    19081 agcttttcta cacaggaaat gagtctatcg aatttttcgt ttttcagatt tgtttgataa
    19141 tctttgaatc ccgcagttga aaaacctggc ttgatgtcaa agaaggcaaa gcgtcgtctc
    19201 agtgcataat caagtagggc taaactccta tctgcggtat tcatcatgcc gatgatatat
    19261 agattttctg gaattgagaa ttgcacatcc gagtagagga gctgtaaaga cttgcctcgt
    19321 ttgtcatttt ctatcagcat aaacaattca ccaaaaattt tgctcaaatt tcccctgttt
    19381 atttcatcaa taataaagaa ataatcatga ttcttgtcag actctgcttt tttgcagaaa
    19441 gtatagaatg cccctcttct cagctcaaag ccacttgtcg aaggtctaaa gcccatgatg
    19501 aagtcctcgt aggaatagct ttggtgaaac tgaattgtca tgaccctttc taaatctggt
    19561 ttacccatta atgaaaatgc taggcgctct gcaacaaacg tctttccaac tcctggcgct
    19621 ccttgtaaga tgatattctt tttcatttgg agtatggagg ttaattgatc atactcttct
    19681 tctgtcatat agacttctga taggaagtga tttttcgtat agctatcttc tactacatct
    19741 tcactaccta tctcgtttcc agtatcagct tcctcagcca gtggagaaat tgcgccagca
    19801 cttcttttct tctcttcttg attgtatttc caagccatgg atgataattc tttaaaattt
    19861 ttcagtttgc tctctgcact ctttaaatat tgaagtatag aatctgaaat atcaaaatac
    19921 tcatcagcag aaatttttga cttcatcttt ggcaattttt ggacaatgtc agcaggaatc
    19981 tccccagact catacacata cgtttcattt tgactatcta agttcaagaa aaagtcagga
    20041 gcaatccaat acaaggccat cgtaatcttg ctgttgccat ttcctttctt gtttatagcc
    20101 aaatcaaaat agtgtgaaaa tttttctttc ttctcagccg taggctcctt gctataggtc
    20161 aaagcagcaa tgaaaagttc ccataagtca tcaatatcat tctcatcacg atctccgatg
    20221 aagtaataga aagtcgcatt ctgattattc agtactggta tgctttcaaa agaggatggg
    20281 atttccgctt ggaggtggaa taattctgct atagctgtca gaattttgat gcgattctct
    20341 tctgttattc tcttattgaa gagtccaaat atcgtaaagg gatcaatatc catcagttga
    20401 ttgtcctttt ctaacgtggg catatgtatc ttggttttgg tatagatagc ttttactttc
    20461 tcaaccagct ctgctctatt atctttatag tctaccaatt tccaagcaaa ttccttataa
    20521 aagtttaccc aattgaattg attttgttca tccatagtat cctccaacgg tgttgtatct
    20581 acacctatta aattatgagt tcgaatttac ctatatttta tcattaaaca ttcctgtcgt
    20641 aaacttagaa tttatatact tgtgtaaccg tttaatgtgg tacctaaaaa tagttgcttt
    20701 tgatatttat atatgataat atataactga aaacgtttta gaaaggtgtg atggctatgc
    20761 tgaaatactc gaaagtgctg ttacttgtct tgcttattgc cactggtcta tcttgtattg
    20821 gaatctactg gctcggaaaa gagcaaaata gac
//
LOCUS       DASFQD010000031        20070 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.031, whole genome shotgun sequence.
ACCESSION   DASFQD010000031 DASFQD010000000
VERSION     DASFQD010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 20070)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20070)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20070
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.031"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..1173)
                     /locus_tag="U1021_000865"
     CDS             complement(<1..1173)
                     /locus_tag="U1021_000865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711426.1"
                     /translation="MNTQSISNRLRQHQHQDLAIKEAFLRFQAHHFDEPWERLLETFI
                     EQEGRVNLFPTPYDVSAELAAFLSQGDQPSEHLGAYTYRFAQAGLRQLPQLSPVEKDM
                     VVLVATYNLAVRFQLLDQAGSYYGVSLGSLVSQMNQVDFINVSKVANNLADRISRELD
                     LFILDYESLVISKPELSFEENSQAVIASYGQSVAKLDKASLLVEHLPAYQDLPLGIKA
                     DIITQFDQKKAELSQVKQEETVRFEEVDNVVTAYLTNQAEPLSSYDRRLGKSQHYEAY
                     DQLNVIQKFAILSHYDELAKLERPLQFRLGDFDEERRQTPIYEGETIFTYLEADGSAD
                     ELAREPGSQELAELVDLSRQILARHYQVLEAAGVPVEDFPEDSRGVLLDAVGKYRLP"
     gene            complement(1775..1921)
                     /locus_tag="U1021_000866"
                     /pseudo
     CDS             complement(1775..1921)
                     /locus_tag="U1021_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017370833.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
     gene            complement(1914..6857)
                     /locus_tag="U1021_000867"
     CDS             complement(1914..6857)
                     /locus_tag="U1021_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018367280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4711427.1"
                     /translation="MTLPIQVKPIVTQEKGEKHVFRKSKKYRTLCSVALGTVATAVLA
                     LGGGIAKADELATTLVETSIVLTDNSATNLPEAQPAETSEHTTSLSETGQSQGTMPVT
                     IDETTLKQAINDAKAEGVTITSGQDMDLGTSQTAEETSQALDTAKADMDKQVSELDQV
                     TAQYQSDKAEHAAEVARIDRENATLQASHKQAEDAAKKLEKDVATTVSDMNHRFSNAK
                     VTVTDKTITSGDGTSPEAYEGYTKLVQGVSDQNQSAIATYVAKKTEADAQTAKNKQIE
                     AENAAGLAKAKEDNEAITKRNQAGQVAIDEENRRGQAAVDQANKDKQAQVTNRQAEIE
                     AIKKRNAQKQAEADATNKANEAYNASEKARYDRELAEIRKGEEGYISEALAQALDLNR
                     GEPQAQHGAATRNPDHIISTGNAMLGGYSNILDSTGFFVYDQFRTGETLRFNYSNLQN
                     ASFASKKITGVTYDITNLVSPAGTNSVKLVVPNDPTEGFIAYRGDGTGDWRNDKMEFR
                     VEAKYTLADGSQVTFSKEQPGVFTHSSLNHNNIGLEYVKDSSGKFVPINGSTVQVTGE
                     GLARSLGSNRAHEIGTPEEWDTTSSRYAYKGAIVSTVTSGNTYRVTFGQGDMPTQVGG
                     KTYWFALNTLPVARTVRPYTPKPLVKPNLDPVPDPLTYTPSVYTPKTFTPEPLVTFTP
                     KPTSPVEEPSLTLVKVALPTQPVYEKTPTPPAVPSVQVHGYRLATQPGIHKEVENSDR
                     VSIDKSLVAKASPVNYPLEVGDLSSNRVTTTNLIFEDYLPAGYVLNATTTEEHNTAYE
                     VAYDSSKHLVRLTAKDSLLSEVNKDLTKSYRLTAPVLYGTVVNDGAIYTNTYKLIINQ
                     GTPTAYTVTSNPVTVRTPGDGTTTTLIIPEKTNKNSDGIVINDTVVLVGSTNHYTLTW
                     DLDQYKGDQSSKETIAKGFFLLDDFPEEAVMTNDKTVSVTTLDGKTLSGFVATTYKDL
                     SEVPETLRHQLTTAKISPKGAFQVIVPEDNQAFYDTYVKTGTSLLVTSPMTVRTDLKD
                     KTLTYTNTAYQIDFGNGYATKEVTNTLVTPEPMKKNLNADHVDINGQAMLVGSKNFYT
                     LSWDLDQYKGIVATKDAIAKGFYFVDDYPEEALEIDTKAIQVVTQEGKIVSDLMIDTY
                     QNLEEAPDSLKAAFLAKKISPKGAFQVFRPKDNQAFYETYVKTGQSLTIIDPMTVKDN
                     LYNSGHIYTNKAYQVDFGLAYETEEVSNFIPIVTPKKVNTNDKGVTIDGKTVLPDTVN
                     YYKIVMDYSAYKGMAATKDQIAKGFYMVDDYPEEALELNPEGIQVIDGQGQAVKGLSV
                     KVYASLTESPKAVQEAMAGKGFVPKGAIQVFTADDPQAFYDTYVKTGQTLVVTNPMTI
                     KKDLVKTGGDYTNTAYQIDFGLAYVTETIVNNVPKIDPKKDVVIDLSHKEQSLDGKEI
                     ALNQVFNYRLQGAHIPAHRATDLTDYRFNDDYDEKHDQYDGVYQAYLMTDVTLIDGTV
                     LKSGTEVTEYTLQTVNTKSGQVSISFDKDFLTSISDESAFQADIYLQVKRIAAGEVEN
                     TFSHIVNGVSITSNTVKMTTPELVIPPTPPTPKPEVPGTPIPTPVPPQTPGLVASLPQ
                     TGEAASLLGLVGGGLMLGLAYGAYRKKKQVGSEDSYA"
     gene            complement(7185..8180)
                     /locus_tag="U1021_000868"
     CDS             complement(7185..8180)
                     /locus_tag="U1021_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HEM4711428.1"
                     /translation="MTTTKESKKGLSTSELIVHIRNKHGLIISEENDVDLLNMGYYHA
                     YKRFRYVKKANADGRLRLTSFNEIIAIYQFDKALKELFYPLLMTIETGLKNRAIESLV
                     AGTDSGLDDFLESQMNVLKNYVPEDKKFPIAQERYEATKTNLLETVAYYSDKNDSIKH
                     YLSSDYQIPIWVLFEVISFGQFSKILGCLTSESKQKLHEDVNLIPNVSNDMELLVNSL
                     IELRNATMHNNAVFDANFSSGVPKKVKKQIQMDLGLGQSSFQCQFIEDYLIVLIWSLL
                     KISVPKAQVRFYVDRFVSISHCFDEQLHNRDVLFKILSTNHKSKIEKLTIFLDNY"
     gene            complement(8247..11078)
                     /locus_tag="U1021_000869"
     CDS             complement(8247..11078)
                     /locus_tag="U1021_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000656693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HEM4711429.1"
                     /translation="MAVTKQELKRARLTRKSNLRQGRRTYRLKRQEARQNFISQSGRR
                     GFLFHRMVSSKSPAQVAYQETVSSAKKEFDDLKEEEDKRFDSLLSSANPYDLSHRELK
                     HHRLPQAKTRHKQARQHLKNVKEEEKAEDKKKASVRIDDAKRSRFFYQAKSFDRLQAE
                     QEVSQSKQDLKRVKAVTRHKSPKTKLKRAGRYIGREVLYLASQDDDLAGARNLVDSSY
                     QVARYTRTGIDTGKGAVKLSKEGTRFIVQRARNTKERYQNWRVGKGFSLKKKENQLAQ
                     RFKHEVARRANQTRPLGKIIQSLISSFKRAFMALMGNPVTWIVSGFLLFLLLMMSFFL
                     GFASQTLIQQDEFELTKAYTHMTWEDAEQTRTSEKGITYYTKVDDVMAYMNSQFQDYV
                     LEDRISVLPPSITYKDYLSTLWQDLNGGDSLKTMAELYDQPPYQLSKEEQDDLKELSE
                     EGVYASMQELENPFEGKTDDDVLPMTYRYGYYHLDGKPTMQEFIILEAKENQAVLAPL
                     DGTIHLDGDDVVITAGKKVSSVSLRLYGIHTGRLVEGQRVVVGDRIGQTKTNTGLKVS
                     YEKYDPDQKKLVAVNPAFYFPKVVQVQTTILPNIGQFGGDEFERAKAIYTYLKAKGAT
                     NQAIAAILGNWSVESAINPKRAEGDYLSPPVGASDSSWDDPNWLAMGGPAIYNGGYPN
                     IIRRGLGLGQWTDTADGSRRHTLLLEYAKRKGKPWYDLELQLDFMLEGDNPYYTNWLN
                     GFFQNTGSPASLAQVFLTYWEGNSGDKLLERQTRASEWYYQIEKGFSQPNGGTAQSDP
                     TALEAVRGDLFDNSIPGGGDGMGYAYGQCTWGVAARINQLGLKLKGRNGEKIPITSVM
                     GNGQDWVASAAALGVETASTPRAGAIISFAGGSHGTPIPYGHVAFVEKVYPDGSFLIS
                     ETNVNGNPNYTFRKISGVDAAMSFAYTVK"
     gene            complement(11080..13449)
                     /locus_tag="U1021_000870"
     CDS             complement(11080..13449)
                     /locus_tag="U1021_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017646985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM4711430.1"
                     /translation="MRNLLKPSTKSKRSATDKKRQKELRQELQPTTVNTLAYQGLFEN
                     GLMQVTPDYYSQSYLLGDVNYQTVGLEERALIVDKYSDMINALDDRTHFQLTLFNQRV
                     NLNKFRSSVLYPLHGDGYNHFREELNQMMNQNLENGENNFNTLKLITFGKSDSSVKQA
                     HRSLSQVGEYVKNGLAEIDCTFNRLEGEKRVNLLADMLRGDNHLPFSYKELALSGLTT
                     KHFIAPQSMSFKHKDYLTIDERYLQVVYVRDYGTELGDGFIRDLMQADREIIISFHVK
                     GSQKSEAMTKVRTKKTLMESQKIGEQQKMARSGIYLEKASHVLETTIDEADDLLNTMT
                     KTGDKLFETVFLIGLLEDSPEALKEALNDMRQVAGSHDLIIEPLPYMQEAAFNSLLPL
                     GKNFLKGISRSLLTSNIAVQSPWTSVDLQDKGGKYYGINQISNNIITIDRKALNTPSG
                     LILGTSGAGKGMGTKHEITTTRLKEVDDKTDIIVVDPENEYGLIGQAFDGESIIIAPD
                     SQTYLNVLDLSSHGFDEDPVKLKSEFLLSWIGKLLDRQMDGREKSIIDRVTRLTYQHF
                     LEPTLEEWVFVLSKQPEPEAGNLALDMELYVKGSLDMFAHRTNVTTDKSFVIYNVKKL
                     GEALKPIALMVVFEQIWNRVVRNQQLGKTTWIYFDEMQLLLLDEYASNFFFKLWSRVR
                     KYGAIPTGITQNVETLLMDANGRRILANSEFMILLKQAKNDREELVHLLGLSKELEKY
                     LVNPECGAGLIKAGHTVVPFKNRIPTDTQLFDLMSTDPDKMVQATREGE"
     gene            complement(13400..13756)
                     /locus_tag="U1021_000871"
     CDS             complement(13400..13756)
                     /locus_tag="U1021_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001097588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrgI family protein"
                     /protein_id="HEM4711431.1"
                     /translation="MNTRVFKDISKYQHRAWLGFTTRQVIFVLPALVITVLVLGLNLF
                     FWQFGDWFVYGFTGSFTLPLLLFGVYRPNHLAFEHYLHYRLRFALTVPVRTLTGKENT
                     HAKSTKTINEIQAFCD"
     gene            complement(13845..14696)
                     /locus_tag="U1021_000872"
     CDS             complement(13845..14696)
                     /locus_tag="U1021_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001011946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbL"
                     /protein_id="HEM4711432.1"
                     /translation="MNNLFPQLVFLVSEKVSSDNLFEGFSLDLESTADLVKSLSDYNP
                     TVWAYMTAVTEQVMRPIGVAILALILILEFSKLAKKIAGSGGAMTIEAIAPMIVSFIM
                     VGVVMANTTVIVEAILGLAGHALSRIAGVVAQSGQTYDTLSGLKGFGTVGKMIIAFFA
                     LLIWLVRMASAAMVNLMVTIRFIQLYLMLPFAPITLPTFLSDEWRGVGIGYLKNIMVY
                     GVQGILIFLIVSLMPLFESAGKIAVANGVGAGEALVIMFGSFVQAILLIIALVGSQRT
                     ARSILGM"
     gene            complement(14716..14958)
                     /locus_tag="U1021_000873"
     CDS             complement(14716..14958)
                     /locus_tag="U1021_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018367287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711433.1"
                     /translation="MIQKLPNLTYGVDASSMFAQAMSLLQKGLVATGAFLVVIGVINL
                     ATNIKDGGPGVRNAILEIVGGVMVGAAGAFVTQITI"
     gene            complement(14968..16864)
                     /locus_tag="U1021_000874"
                     /pseudo
     CDS             complement(14968..16864)
                     /locus_tag="U1021_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002883241.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
     gene            complement(16861..17349)
                     /locus_tag="U1021_000875"
                     /pseudo
     CDS             complement(16861..17349)
                     /locus_tag="U1021_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017648298.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(17407..18003)
                     /locus_tag="U1021_000876"
     CDS             complement(17407..18003)
                     /locus_tag="U1021_000876"
                     /inference="COORDINATES: protein motif:HMM:NF014566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4711434.1"
                     /translation="MKTYLDARIWNIFGLYLYQYVNTILVSLYLGDQLSLSEVLVFQL
                     LYLASLIWLLKKCSRYKFGQSRLVWLVTCLGSMFLISVLVGILWPVTSTNQTNLISVQ
                     SQLPLAVFILFLTNASLVEELVYRGFLWSVFPKSYQSLLITSLVFALAHQPDSLGSWV
                     VYGILGLGLGFMRLKTDLLGVTMLHSVWNGLVLLTTFL"
     gene            complement(17981..18214)
                     /locus_tag="U1021_000877"
     CDS             complement(17981..18214)
                     /locus_tag="U1021_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000840775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM4711435.1"
                     /translation="MAELFWENLALLLAEKEMSWAELTRQMFAGSYQYPSEFNRLYQK
                     IRHYKSTCQMPQTKWVEKIVLVLEVDYEDLFRR"
     gene            complement(18224..18601)
                     /locus_tag="U1021_000878"
     CDS             complement(18224..18601)
                     /locus_tag="U1021_000878"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711436.1"
                     /translation="MRLYLSKHQDRHQSLIETLDAYGIAYELVDFEQLKKEDLLEWMR
                     LSPDCFDFLTPTCLIYKRRDNLPFSRFLDIIWDNRARSLRLPLIVDKDQVYPDVNLED
                     LRTFLPRELKAEKRQALKALLSV"
     gene            complement(18655..19035)
                     /locus_tag="U1021_000879"
                     /pseudo
     CDS             complement(18655..19035)
                     /locus_tag="U1021_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001050381.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(19019..>20070)
                     /gene="dcm"
                     /locus_tag="U1021_000880"
     CDS             complement(19019..>20070)
                     /gene="dcm"
                     /locus_tag="U1021_000880"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000670032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEM4711437.1"
                     /translation="ARCAKEIQPSYLFFENVKGLLSHDQGRTYATILNTLDELGYHVE
                     WQVLNSKDFGLPQNRERVFLIGHSRKRGFRPVFPLRGQGSPAHLDRLGNVNPSGKGMS
                     GEVYLSTGLSPTLTVNKGEGVKIAIPVLTPDRLDKRQNGRRFKDNQDPMFTLTAQDRH
                     GVLVAGNLPTSFDQAGRVYHTEGLSPTLTTMQGGDKIPKVLLRHEAPHLKIREATKQG
                     YAKATVGDSVNLSYPKSNSKRGRVGKQMANTLTTSSQQGVVIAALEYRKDKWFEVTGF
                     LVGDKLYRLRIRKLTPRECFRLQGFPDWAFDRAEAVSSKSQLYKQAGNSVSVPVIAAI
                     AGELKKLEEKHETTT"
BASE COUNT         5281 a         4705 c         4373 g         5711 t
ORIGIN      
        1 gggcaaacgg tatttcccaa ccgcatctaa caagacaccc cgactatcct ctggaaagtc
       61 ctcgacgggt acaccagctg cctctaaaac ttgataatgc cttgccaaga tctgacgact
      121 gaggtctacc aattctgcta gttcctgaga acctggctct ctagccaatt catctgccga
      181 cccatccgct tccagatagg taaaaatcgt ctctccttca tagatggggg tttgcctgcg
      241 ttcctcatca aagtcaccca aacgaaattg taatggtcgc tctagtttgg ctaattcatc
      301 gtagtggctt aaaatggcaa acttttggat cacgttcagc tggtcataag cctcatagtg
      361 ctggctcttg cctaagcgac ggtcataaga agagagcggt tcagcttgat tggtcagata
      421 agccgttacc acattatcaa cttcttcaaa tctgacggtt tcttcctgct tcacctgact
      481 gagctctgct tttttctggt cgaactgagt aatgatgtct gctttaatgc ccaagggcaa
      541 gtcctgatag gctggtaaat gttccacaag caaactcgcc ttatctagct tggccacaga
      601 ttgaccgtaa ctggcaatga cagcttggct attttcctca aaactcagtt caggcttaga
      661 gatgactaga gactcatagt ccaagataaa gaggtccagt tctcgactaa tgcggtccgc
      721 tagattatta gcgaccttgg acacattgat aaaatccacc tgattcatct gagacaccaa
      781 actccccaag gacacaccat aatagcttcc cgcttggtcc aaaagctgaa agcgaacggc
      841 gaggttatag gtcgctacca aaaccaccat gtctttttca acaggactga gctgggggag
      901 ttgtcgtaag ccagcctgtg caaagcgata ggtataggct cccaaatgtt cagaaggctg
      961 gtctccttgg ctcagaaaag ctgctagttc cgcactcaca tcgtagggag ttgggaaaag
     1021 attgacacga ccttcctgct caataaaggt ttccaaaagc ctttcccaag gctcatcaaa
     1081 atggtgggct tgaaaacgta aaaatgcctc cttaatggcc aaatcttgat gctgatgttg
     1141 acggaggcgg ttgctgatgg attgtgtatt catctgatag ttctcctttg attttcttta
     1201 gtcaaaaagg actgagaaag ctctcagtcc caatcgctta gagggtcatt gacagctctc
     1261 gctgtgcgtc tacttgaggt ctagttaggt ctgccatata gcttcgtaaa aactgggaac
     1321 gactatccaa cttgtcttgg gcaagagcca aatgaactaa gcctccgaaa taatcgtcac
     1381 tatctgcgtc cagctggtgg cgaatcaaat catctaaagt ctccaaacta taggggtcaa
     1441 agttgcccaa ttcccaacca tctgacgaca ccaaataagt agacgactga ccttgtaaaa
     1501 tatctgaaat aaactcattt ccatcccctg ttcggtagag attatctagt agtcgggtca
     1561 ggtcttgcct aatcacctca ctctgctcat ccgcaaccaa tcgcagttgc tcatccaaca
     1621 gataaatgtt gtctgtagcc atgtagtaag catagaggtc attaagaagc gtttgactgg
     1681 taatttgggt ctcgacactc ataatagcct tggtaaatga tgaagcatcc ctgtctaaaa
     1741 agtattgcat aacctgtcgc atttcctgaa aagtaggggg gtgaccagat aggatttctg
     1801 ccaaatcagc ttgtccatca ccatcagaat ccggacttag tggattggtt ccaagagcta
     1861 gttcttgagc atctgtgaga ccgtctcggt cactatcttt agtgtaaatg gtcttaggca
     1921 tagctatcct cacttcctac ttgctttttc ttacgatatg ctccataagc tagtcctaac
     1981 atcagaccgc caccaaccag gccaaggagt gaagctgcct cacctgtttg tggaagacta
     2041 gcaactagac caggtgtttg tggaggaact ggtgttggaa ttggagttcc tggaacttct
     2101 ggctttggag taggaggtgt cggtgggatt acaagctcag gggtcgtcat tttaactgta
     2161 ttagaggtaa tgctaacccc attaacaata tggctaaagg tattttccac ttctccagcc
     2221 gcaatccgct tgacttgaag gtaaatatcg gcttggaagg cggattcgtc tgaaatactg
     2281 gtcagaaaat ccttgtcaaa ggaaatagac acttgaccag acttggtatt caccgtttga
     2341 agcgtgtact cggtcacttc tgttcccgat ttcaggactg tcccatctat caaggttacg
     2401 tccgtcatca ggtaagcctg ataaacacca tcatactggt catgtttttc atcgtaatca
     2461 tcgttaaagc gatagtcagt gagatctgtc gctcgatgag ctggaatgtg ggctccttga
     2521 agacgatagt taaagacctg attaagggca atctccttgc catccaaact ctgctccttg
     2581 tgagacaagt caataaccac atcctttttg ggatcaattt tgggtacatt attgacaatc
     2641 gtttctgtca cataagccag tccaaaatca atctgatagg cggtattggt gtagtcacca
     2701 cctgttttaa ccaagtcttt ctttatggtc atgggattgg tcacgaccaa ggtctgacct
     2761 gttttgacat aggtgtcata aaaggcctgt gggtcatctg ccgtaaagac ctgaatggct
     2821 cctttaggca caaatccctt acctgccata gcctcttgaa cagcctttgg tgattcagtt
     2881 agagaagcgt acaccttaac ggataagccc ttgactgctt gcccttgacc atcaatcacc
     2941 tgaattcctt ctggatttag ctccaaggcc tcttctgggt aatcgtccac catatagaat
     3001 cccttggcaa tctggtcctt ggtcgcagcc atgcccttat aggcactata atccatgaca
     3061 atcttgtagt aattgacggt atcaggtaag acagtcttcc catcaatggt cacaccctta
     3121 tcattggtgt tgactttttt cggagtaaca atgggaataa agttggatac ctcttccgtt
     3181 tcgtaagcca gaccaaagtc aacctgatag gctttattgg tgtagatatg acctgagtta
     3241 tagagattgt ccttgacggt catagggtca ataatagtta gagattgacc ggtcttgaca
     3301 taagtctcat agaaggcctg gttgtctttt ggtcgaaaga cctgaaaagc acctttggga
     3361 ctaattttct tagccaaaaa ggctgctttc aagctatctg gagcttcttc caaattctga
     3421 taggtgtcaa tcatcaggtc agatacaatc ttcccttctt gtgtcaccac ttgaatagcc
     3481 ttggtgtcaa tctcaagagc ttcctctggg tagtcatcca caaagtaaaa ccccttagca
     3541 atggcgtctt tagtcgccac aatacccttg tactggtcta agtcccatga caaggtatag
     3601 aagtttttag aaccaacaag catggcctga ccattgatgt ctacgtggtc ggcattgagg
     3661 ttcttcttca tcggttccgg tgtaacaagc gtgttggtca cttccttcgt cgcataacca
     3721 ttaccaaaat caatctgata ggcagtattg gtgtaggtta aagtcttgtc cttgaggtca
     3781 gtacgaaccg tcatgggact ggtcaccaaa aggctagtgc ctgtcttgac ataagtgtca
     3841 taaaaggctt gattgtcttc tggaacaatg acttgaaaag ctcctttagg gctaatctta
     3901 gccgttgtca gttgatgtct aagtgtttct ggaacttctg acaagtcctt ataagtcgtt
     3961 gccacaaaac cagataaggt ttttccatcc agggttgtga cacttactgt cttatcatta
     4021 gtcatcacag cttcttctgg aaaatcatcc aagaggaaaa agcccttggc aatggtctcc
     4081 ttggaagact ggtcaccctt atactgatcc aggtcccagg tcaacgtata gtgattggtt
     4141 gaaccaacta agaccaccgt atcattgata acaatgccat cgctgttttt gttggtcttc
     4201 tcagggatta tcaaggtcgt tgtagtccca tcacctggtg tccgaacggt cacagggttt
     4261 gaggtgacgg tgtaggcggt tggtgttccc tgattgatga tgagcttgta agtgttagtg
     4321 taaatcgcac catcattgac caccgtaccg tacaaaacag gagctgtcag gcgatagctc
     4381 ttagtcaagt ccttattgac ttcagagagg agactgtcct tagctgtcaa gcgaaccaag
     4441 tgcttagagc tgtcataagc cacttcatag gcagtgttat gctcttctgt tgtcgttgca
     4501 ttcaggacat aacctgctgg taggtagtcc tcaaagatga ggttagttgt cgtgacacga
     4561 tttgaagaca agtcccccac ttccaaggga tagttgacgg gagatgcctt agcaactaaa
     4621 ctcttgtcaa tagacacacg gtcactattt tccacctcct tatggatacc tggttgggtc
     4681 gctaaacggt agccatgtac ttgaacactt ggaacagctg gtggcgtagg cgttttttca
     4741 tagacgggtt gagttggcaa agccactttc accaatgtca aactcggctc ctcaacaggg
     4801 ctggttggtt ttggtgtgaa ggttaccaga ggttctggcg tgaaggtctt tggcgtatag
     4861 acagacggag tgtaggttaa gggatctggt acagggtcaa ggttaggttt gaccaagggt
     4921 tttggtgtat aaggcctaac tgtccgtgct acaggcagag tattaagggc aaaccagtag
     4981 gtctttcctc cgacctgagt gggcatatct ccctgaccaa aggtcactcg gtaggtattg
     5041 ccagaagtca ccgttgacac aatcgccccc ttataggcat agcggctgga agtcgtgtcc
     5101 cattcctcag gtgtgccaat ctcatgggct cggttagaac caagtgaccg tgctagaccc
     5161 tcgcctgtta cttgaacagt tgaaccattg ataggaacga acttgcctga tgaatccttg
     5221 acatattcta agccaatgtt gttgtggttt agtgatgaat gggtgaatac tcctggctgt
     5281 tccttagaaa aggtcacttg actaccatca gctaaggtgt atttggcctc cactcgaaat
     5341 tccatcttgt cgtttcgcca gtcacctgtt ccgtctccac gataggcaat aaacccttct
     5401 gtcgggtcat ttggaacaac cagcttaaca ctattggttc ctgctgggga aacaagattg
     5461 gtaatatcat aggtcacgcc tgtaatcttc ttgctcgcaa agctggcgtt ttgaaggttc
     5521 gaatagttga accgcaaagt ctcccctgta cgaaactggt cataaacaaa gaaacccgtc
     5581 gaatcaagga tattactata accacccagc atagcatttc ccgtgctaat aatgtgatcg
     5641 ggattgcgag tagctgcccc gtgttgggct tgaggttctc cacgattaag gtcaagagcc
     5701 tgggcaaggg cttctgaaat atagccctct tctccctttc taatctctgc cagttctctg
     5761 tcgtagcgag ctttttcaga ggcattgtag gcttcattgg ccttgttagt cgcatcggct
     5821 tctgcctgtt tctgggcatt acgttttttg atggcttcaa tctctgcctg acggttggtc
     5881 acttgagctt gcttgtcctt attggcctgg tccaccgctg cttgaccacg gcgattctcc
     5941 tcgtcaatgg caacctgacc tgcctgattt cgcttggtaa tggcctcatt gtcttctttt
     6001 gccttggcta aaccagctgc gttttcagct tcaatttgtt tgtttttagc agtttgggca
     6061 tcagcttcgg ttttcttagc cacataagtg gcgatagcag attggttctg gtcactaacg
     6121 ccttggacca gtttagtgta gccctcatag gcttcgggag atgtgccatc gcctgatgta
     6181 atggttttat ccgttaccgt taccttggca tttgagaaac ggtggttcat gtcagaaacg
     6241 gtggtagcga catctttttc aagctttttg gccgcgtctt cagcttgttt atggctagct
     6301 tgtagggtcg cattctccct atcaatccgt gcgacttccg ccgcgtgttc agccttatcg
     6361 gattggtact gggctgtcac ttggtcaagc tctgacacct gcttgtccat atcagcctta
     6421 gcggtgtcaa gggcttgact ggtttcttca gctgtctggg aagttccaag gtccatgtct
     6481 tgacctgatg taattgtcac tccctctgcc ttggcgtcat tgattgcctg ctttaatgtc
     6541 gtctcatcaa tggtcacagg catggttcct tgcgactgac ctgtttcaga aagtgacgtt
     6601 gtgtgttcac ttgtctcagc aggctgggct tcaggaaggt tggtcgctga gttatccgtc
     6661 agaacaatgg aagtttcaac tagtgtcgta gccaattcat cagccttggc gatacctcct
     6721 cctaaagcta gtaccgccgt tgcgacggtt cctagtgcaa cagagcagag agtacggtac
     6781 ttcttgcttt tgcgaaagac atgtttctca cccttttctt gggtcacaat tggtttcact
     6841 tgaatgggta gggtcatggg acactccttt atggtaatat ttatcgattg ccagaactac
     6901 tggctaacct tgccccatca taccaagaag gatttgcgga tgttatcaca taaaaaagcc
     6961 agtagcacac ggctactggc tggagagaga tatgctaaca gtttcattaa acgttagcat
     7021 atcctttatt ttttcacagt tcattctgca atggatatgg gttttcagtc tccattccga
     7081 ctttttgtga gatagtcaag aataaaaaag aagaactgac gcatcagctc ttccagacac
     7141 gtcagtacgt gccccaattc gataatacta ttctacacga tggattagta attgtcaaga
     7201 aaaatggtca atttttcaat tttagactta tggttagtac tcaaaatctt aaacaagaca
     7261 tcacgattgt gtaattgctc atcaaaacag tgactgattg atacaaatct atcaacatag
     7321 aaacgaacct gtgcttttgg gacagatatt ttcaacaagg accaaattaa cacaatcaaa
     7381 taatcttcaa taaattgaca ctgaaagcta gactgaccta aacctaaatc catttgtatt
     7441 tgctttttga ctttcttagg cacaccactc gaaaaattag cgtcaaaaac agcattgtta
     7501 tgcatagttg cgttacgtaa ttcaataagg ctattaacta atagctccat atcatttgaa
     7561 acgtttggaa ttaggttaac atcttcatgc agtttctgct tagattcact ggttaaacaa
     7621 cctaatattt tactgaattg accaaaagaa atcacttcaa acaaaaccca aataggaatt
     7681 tgatagtcag aacttaaata gtgtttaatt gaatcatttt tatctgaata ataagctacc
     7741 gtttctaata aattagtttt agttgcttca taacgctcct gagcaatagg gaatttctta
     7801 tcctctggta cataattctt caaaacgttc atctgactct ctaaaaaatc atctaatccg
     7861 ctatccgttc ctgcgacaag agattcgatt gctctatttt tgagaccagt ttcaatggtc
     7921 attaaaagtg gatagaataa ttctttcaac gctttatcaa actgataaat ggcaataatt
     7981 tcattaaatg aggttaaacg aagccttcca tctgcatttg ccttttttac atagcgaaaa
     8041 cgtttataag catgataata tcccatattc agcaaatcaa catcgttttc ttcacttata
     8101 attaatccat gcttattgcg aatatgtaca atcaactcac ttgttgatag acctttttta
     8161 gattctttgg ttgtcgtcat ttatagtttt taactttcta tgattactcg tataaaacct
     8221 attatagcat atcacattct gaatttctat ttcaccgtat aagcaaaact catagctgcg
     8281 tctactccgc tgattttgcg gaaggtgtaa ttaggatttc cattgacgtt ggtctctgag
     8341 atgagaaacg acccatctgg gtaaactttc tcgacaaagg ccacatgccc gtatggaata
     8401 ggtgtgccgt gactgcctcc cgcaaaggaa atgatagccc ccgcacgagg ggttgaagcc
     8461 gtctcaacac ctaatgctgc agccgacgct acccaatctt gaccgttacc cataacgcta
     8521 gtaataggaa ttttctctcc gtttcgccct ttgagcttga gacccaattg gttgatacgt
     8581 gccgcaactc cccaagtaca ttggccgtag gcatagccca tcccgtcacc acctccaggg
     8641 atagaattgt caaagaggtc tcccctaacg gcttctaggg cagttgggtc actctgggct
     8701 gttccaccat ttggttgact aaagcccttt tcaatctgat agtaccactc agaagccctg
     8761 gtttgtcgct ccaggagctt gtcgccacta ttgccctccc aataggtcag gaagacctga
     8821 gctagactgg ctggactgcc cgtattctgg aagaaaccgt taagccagtt ggtgtaatag
     8881 ggattgtccc cctcaagcat aaagtccaac tgaagctcta aatcatacca gggcttgccc
     8941 tttctcttgg cgtactccag aagtaaggta tggcgacgtg aaccgtctgc ggtgtccgtc
     9001 cattgaccta gaccaagacc tcgacgaata atgttaggat agccaccgtt ataaatggca
     9061 gggcctccca tcgccagcca gttagggtcg tcccatgagc tatcgcttgc cccaacaggc
     9121 gggctaagat aatccccttc tgcccgtttt ggattgatag ctgattcaac tgaccagttg
     9181 cctaagatgg ctgcgatagc ctgattggtc gcaccttttg ccttgaggta ggtgtaaatg
     9241 gccttggctc gttcaaattc atctccacca aattgaccaa tattgggtaa gatggtggtt
     9301 tgaacctgaa ccaccttggg aaagtaaaag gcaggattga ccgcaactaa tttcttttgg
     9361 tctgggtcat atttctcata ggacacttta agacctgtgt tagtcttggt ctgaccaatt
     9421 ctatcaccca caacgactct ttgcccctca accaagcgac ctgtgtgaat gccatacaaa
     9481 cgcaaagaga ctgaactgac ctttttacca gcggtaataa cgacatcatc accatccaga
     9541 tgaatcgtcc catcaagagg ggcgagaacc gcttgatttt cctttgcttc aaggataata
     9601 aactcttgca tggtgggctt accgtccaaa tggtagtagc catagcgata ggtcatgggc
     9661 aaaacatcat catctgtctt cccctcaaaa gggttctcaa gttcctgcat actggcatag
     9721 acaccttcct ccgacaattc tttgaggtca tcttgttcct ctttggacaa ttgataaggt
     9781 ggttgatcat aaagctctgc catggtttta aggctatctc caccatttaa gtcctgccaa
     9841 agcgtggata gataatcctt ataagtgata gagggtggta agacacttat cctatcttct
     9901 aagacatagt cttgaaactg gctattcatg taggccataa cgtcatctac cttggtgtag
     9961 taagtgatac ccttttcgct tgttcgggtc tgttccgcat cctcccaagt catgtgagtg
    10021 taagcctttg ttaactcaaa ctcatcttgt tggataagag tctgactggc aaaacctaag
    10081 aaaaaagaca tcataagcaa taaaaacaac aagaaacctg aaacaatcca agtaacagga
    10141 ttgcccatca aggccataaa agcccgcttg aaactagaga tgaggctttg aataatctta
    10201 ccaagtggtc tggtctgatt agcacgccta gctacttcat gcttgaagcg ttgggcaagc
    10261 tggttctctt tcttcttcaa actaaaccct ttacctactc gccagttttg ataacgttct
    10321 ttggtatttc tagcccgttg gacgataaaa cgtgtgcctt cttttgagag cttgacggcc
    10381 cctttacctg tgtcaatacc tgttctggta tagcgtgcaa cctgatagct agaatccacc
    10441 agattcctag cccctgccaa gtcgtcatct tgactggcta ggtaaagaac ttcacgacca
    10501 atgtatcttc cagctcgctt gagcttggtc tttggagact tatgcctggt cacagcttta
    10561 actcgtttca agtcttgttt gctttgtgag acctcttgtt ccgcctgcaa acggtcaaaa
    10621 gacttggctt ggtagaaaaa acgagagcgt ttggcatcat ctattcggac agaggctttt
    10681 ttcttatcct cagccttttc ttcctccttg acgtttttca agtgttgtct agcctgcttg
    10741 tgcctggtct ttgcttgggg taaacgatga tgctttaatt ctcgatggga taggtcataa
    10801 ggattggcgg aggataaaag gctatcaaac cgcttgtctt cctcttcttt gaggtcgtca
    10861 aattctttct tagcactaga gaccgtttcc tgataagcca cttgtgctgg agatttagac
    10921 gacaccatac gatgaaagag aaagcctcgt ctacctgact gagaaataaa gttttgcctt
    10981 gcttcctgtc gtttaaggcg ataggtgcgt ctgccctgtc tgagattgct tttcctcgtg
    11041 agccttgctc gcttcaattc ttgctttgtg acagccatct tattctcctt cccttgtggc
    11101 ttggaccatc ttatcagggt ctgtgctcat caggtcaaag agttgggtat cggttgggat
    11161 acggttcttg aagggtacaa ccgtatgacc ggccttaatg agacctgccc cacattcggg
    11221 attaaccagg tatttctcca gctccttaga caaaccaagc agatgtacca actcttctcg
    11281 atcattttta gcctgtttga gcagaatcat aaactcacta ttggccaaaa ttcgtcgccc
    11341 attggcatcc atcaagagag tttccacgtt ttgggtaata cccgttggaa tcgccccgta
    11401 cttccgcacc cgactccaga gtttgaagaa gaaattgctg gcatactcat ccaacaacaa
    11461 cagttgcatc tcatcaaagt aaatccaagt ggttttcccc agttgttggt ttctgaccac
    11521 ccgattccag atttgttcaa agactaccat gagggcaatg ggtttgaggg cttctcctag
    11581 ttttttgaca ttgtaaatga caaaggattt atcagttgtc acattggttc ggtgggcaaa
    11641 catatccaga gaccctttga catagagctc catatcaagt gcgagattgc ctgcttctgg
    11701 ttcaggttgc ttggacaata caaagaccca ttcttccaag gttggctcta ggaaatgttg
    11761 gtaggtcagc cgcgtcactc ggtcaatgat tgacttctct cggccgtcca tttggcggtc
    11821 taagagcttg ccaatccagg acaataggaa ctctgattta agcttgacag ggtcctcatc
    11881 aaagccatga ctggataaat caagaacatt gaggtaggtc tggctatctg gggcaatgat
    11941 gatgctttcc ccatcaaagg cttgaccaat caagccatac tcattttctg ggtctaccac
    12001 gataatatct gtcttgtcat cgacttcttt gagcctagta gtggtgattt catgcttggt
    12061 tcccatgccc ttacctgccc cagatgtccc taggataaga ccagacgggg tattgagagc
    12121 cttgcggtca atggtgatga tgttgtttga aatctggtta atgccataat attttccacc
    12181 cttatcctgc aaatccaccg aggtccaagg agattgtacg gcgatattgg aggtcaagag
    12241 acttcgagaa atgcctttta agaagttctt cccaagaggg agaaggctat taaaggctgc
    12301 ttcctgcata tagggcaagg gttcaataat caagtcgtga gagccagcga cctgtcgcat
    12361 atcattcaga gcttctttga gagcttctgg gctatcttct aacagtccaa tcagaaaaac
    12421 agtctcaaag agtttatccc ctgttttggt catggtattt agaaggtcgt ccgcttcatc
    12481 aatagtggtt tctagaacat gactagcctt ttccaagtag atacctgaac gagccatctt
    12541 ttgttgctca ccgattttct gggattccat gagggtcttc ttggttctaa ccttggtcat
    12601 ggcttctgat ttttgagacc ctttgacatg aaaactgatg atgatttccc tgtccgcctg
    12661 catgagatca cggataaaac catcccccag ttccgttcca taatctctga catagaccac
    12721 ctgcaaataa cgctcatcaa tcgttaggta atccttgtgc ttgaaggaca tactttgtgg
    12781 ggcaataaag tgtttcgtcg ttagacccga cagagctaac tccttatagc taaatggcag
    12841 atggttgtct cctcgaagca tatccgcaag tagattaacc ctcttctctc cctctaagcg
    12901 attgaaggtg caatcaatct cagctaaacc atttttaaca tattccccaa cttgggataa
    12961 ggagcgatgt gcctgtttaa cggaactatc tgatttgcca aatgtaatca attttagggt
    13021 attaaaatta ttctctccat tctccaaatt ctggttcatc atctgattca attcctcacg
    13081 gaaatgattg tagccatcac catgcagagg gtaaagaacg cttgaacgga acttgttcag
    13141 gttgacccgt tgattgaaga gagttagctg aaaatgcgtg cggtcatcta aggcgttaat
    13201 catgtccgaa tacttgtcca caataagcgc tcgctcctcc agcccaacgg tctggtaatt
    13261 aacatcaccc aaaagatagc tttgggaata atagtcaggt gtgacttgca tgaggccatt
    13321 ctcaaacaag ccctgataag caagggtatt gacggttgtt ggttgtagtt cttgacgcaa
    13381 ctccttttgg cgcttcttat cagtcgcaga acgcttggat ttcgttgatg gttttagtag
    13441 atttcgcatg ggtattttcc tttccagtta gggttcgtac aggtacagta agggcaaacc
    13501 gtaggcggta atgcaggtag tgttcaaagg ctaggtgatt ggggcgatag accccaaata
    13561 gaagcaaggg aagggtaaaa ctccctgtaa aaccatagac aaaccagtcc ccaaactgcc
    13621 aaaaaaagag gtttaagccc aagactaaaa ctgttatgac tagggctggc aaaacaaaga
    13681 taacctgcct ggtcgtaaag ccaagccagg ctcggtgctg gtattttgaa atgtccttaa
    13741 agacacgggt attcattcaa taatcctcca taactaagat atgattgaca aaaacggagc
    13801 agaccctcta ctccgttatc gtgttaagct ggaacaaggt catcctacat ccctaaaata
    13861 cttctggctg tgcgttgaga gccaaccagg gcaatgataa gcagaatggc ttggacaaaa
    13921 ctcccaaaca tgatgacgag agcctcacct gctcctaccc cgtttgcgac cgcaattttc
    13981 ccagccgatt caaagagcgg catgagggat acaatcaaga agatgagaat accctgaaca
    14041 ccatagacca taatattttt caggtagcca atgcctaccc cacgccactc atcactcaaa
    14101 aaagttggga gagtgattgg ggcaaaggga agcatgagat agagctgaat aaaacgaatg
    14161 gtcaccatga gattaaccat agcggcacta gccattctaa ccagccaaat caagagggca
    14221 aaaaaggcaa taatcatttt cccgacggtg ccaaaccctt ttagacctga tagggtgtca
    14281 taagtttgac cactttgggc aactacgcct gcaattcggg agagggcatg gccagctaag
    14341 cccaaaatgg cttccacaat caccgtggta ttagccatca ccactcccac catgataaaa
    14401 gagacaatca tcggggcaat ggcctcaatg gtcatggctc caccagaccc tgcaatcttc
    14461 ttggctaatt ttgaaaactc caagattaag ataagggcta agatagccac gccaatcgga
    14521 cgcatgacct gctcggtgac ggctgtcatg taagcccaga cggttgggtt atagtctgat
    14581 agggatttga ccaaatcagc ggtcgattct aaatccagcg agaagccctc aaagaggtta
    14641 tctgaggaga ctttttctga gaccagaaaa actagctgag ggaataagtt attcatcaca
    14701 ttgctggtct ccttcttaaa tggtaatctg ggtcacaaag gcccctgcag ctccgaccat
    14761 caccccaccg acaatctcta agatggcatt acggacgcct ggtccaccat ctttgatgtt
    14821 tgtcgctagg ttgataaccc caatcacgac aagaaaagct cctgtcgcta ccagaccctt
    14881 ttgaagcagg gacatggcct gggcaaacat ggagctggca tcaaccccat aggttaggtt
    14941 tggtagtttt tgtatcatct gttttcctca tttctgtttt agtgttgcgg taaagcgagg
    15001 gtcttgactc aggtttcgca ctcggtgtcc ccttaaatca agcggtggtt ctcctgtcaa
    15061 ggcaaggtct ggctcccacc accagttgtc accttcctca tctgccaaat actgccagtt
    15121 ggggtgctta aaggggtcat acttcttggc atagaaggca ggggtattgg caattctgac
    15181 caagcaatcc cctcgatcca tgttgccaac ttcatctggt gtcatgaggt cacgggcaat
    15241 cttttgatgg ctaagagaac cagaccctgt ttggccaaag gaccgactgg tatttctgac
    15301 atcaatggtt tgtttcccta agagtgccga cataaactta aaggtctcct catcattccc
    15361 accaagatag agcaggctgt cacagttacc caagatggtc ttccaagcat ctttttcttt
    15421 gtagaggcct tgaagctggg caatgttttg taggatagga actaagctaa tgtttcggga
    15481 gcgaacggtt gaggtcaatt ccgcaaaatc tggaatctca cccacgttcg caaactcgtc
    15541 cagataagcc cgcacgtgaa taggaagctt tccccttaaa gtccacatca gcctgtctgg
    15601 tcaaggtcga aaagacagtt gagaaaaaga gggcagacaa gaagcgaaag gtagaatcat
    15661 tgtctggaat aaccaagtaa accatggtct tctgccgtcc ccaactctta atgtccatag
    15721 tgtctagctt agttaagtca atgaccgact ggatattaaa gagggcaaac ttagccgtcg
    15781 tcacagcaat gactgaatcc aaggtcttat ccttgtagtt ctgaaaatct gcccagtttc
    15841 gcatagtgaa gttttctgta ccataggtct tggcgtagcg ctcaaacatg acctctagga
    15901 cactcttctc aaccccgtca gccttatgaa ggagcttaat caacttggaa atttccgcaa
    15961 aagacgggta tcgtcccctc ttacgacggt tctccaagtc ttgtttctcc ttagcatgta
    16021 gagcttttct ctctttttta gacaaacgat cttcttccat cagctgtgct ctggtctttg
    16081 gtgggttgta aaaatcaacc aggtaagaag caatggctct caccaaagtc atcgaagcct
    16141 cgtcccaaaa gggatcgctg cgtgacccat tgcctttggt gttattgaaa tacaccgtca
    16201 gcatacggtt caaatcattc tcagtttcca catagcgaaa aggattgaaa ccgttactgg
    16261 tcatcatgga tactaagtct aaaatcttta tctgatagcc ctctttcagg aagaactttc
    16321 ctgtcttttg aggcaggtgg tccttggggt caaccacaat attggtacag ttggcttgaa
    16381 tcagattggg tttaacaaag cgaaaggtct ttcctgcacc tgaaccaccg atgaccacta
    16441 ggttcttgtt tcggtcatat ttgggagcat tcttctccaa gagggtcaac cgaacggtct
    16501 tcgccaatat agtgtccaaa aaaggatttt tactggcaaa ggcctgactt tcctgtcttg
    16561 taccaaagcg agctgatcca tattcctgcc cctctcggta aaccttggct cctgaagtcg
    16621 tgtagaggta ggtcaagctc attgccccaa gaccaaatag aaaccagagg ctggagtgaa
    16681 gggtaaagtg gaaattccaa ggttcatcag aaaaaacatt ttgaccttcc atcaagaggt
    16741 aggtccatcg ttcaagaaca ggcaggtgac tcagctcatc atagagaagg ctcaagcgat
    16801 gacagacata acctagagct agacccatca tgataaaaac gacttgtctt actttagaca
    16861 tcacagcacc atttctttcg ttttaacgct agagctatca ctcagaacaa tgctttcctt
    16921 agctaaggct atttcttcat ctagggtctt atctgtcacc aattccttga gcttgtctgg
    16981 gtcattgacc agctctttga ggagggtgtc taggtgggta tccagtaaag acctatcctt
    17041 ggtgtagaaa taaaggtagt cgtcttgaaa agagatggct agaggtaggt tttcctttat
    17101 cagtacctct tttagcttct caacatccac gggcttatct aagagttctg tttttaagtc
    17161 aatgacatca atagcaaatg gggtcttgac caaatctgcc aaggtttgaa ggccaagttt
    17221 ataagctgtt tcttggtaga gaccacgttt gacagaccag tccagaatct tgagaaaggt
    17281 tctcagcgtt aagaaactac ttcgttctaa atattgaaag gcttggcgtt cttgttattc
    17341 actagacata acttctcctc tcttgtggga taggcttatc ttaaaccagt tgcctcgcct
    17401 tttttatcac agaaaagtag ttagtaagac cagaccattc caaacagaat gaagcattgt
    17461 cactcctagt aggtctgtct ttagtcgcat gaaaccaaga cccaatccta aaatcccata
    17521 gaccacccaa ctccctaagc tgtcaggctg atgagccaag gcaaaaacaa gactggttat
    17581 cagtaaggat tggtaagact ttggaaagac tgaccagagg aaaccacggt aaaccaactc
    17641 ttcaaccaga ctagcattgg ttaaaaagag gataaagaca gccaaaggga gttgactttg
    17701 tacagatata aggttcgttt gattggtgga agtgaccggc cacagaatcc cgacaaggac
    17761 tgatatcaga aacatagaac ctaggcaggt caccaaccaa acaagccgag actgaccaaa
    17821 tttataccgc gagcacttct ttaagagcca gattagactc gccaagtaaa ggagctgaaa
    17881 aacaaggact tccgacaagg atagctggtc tcctaaatac agagatacta aaatagtatt
    17941 cacatactgg tagagataga gaccaaaaat gttccaaatt ctagcgtcta aataggtctt
    18001 catagtccac ctccaagacc agcacaattt tctccaccca cttggtctga ggcatttgac
    18061 aggtggactt gtagtgcctg attttctgat agagccgatt gaactcgcta gggtactggt
    18121 aactgcccgc aaacatctgc cgtgttaact cagcccagct catctctttt tctgccaaca
    18181 agagggcaag gttttcccaa aataattccg ccatagcccc ctcctaaaca ctcaataagg
    18241 ctttgagagc ttgtcgcttt tccgctttca gttcacgagg aagaaaagtc cgtaagtctt
    18301 ctaaattcac atcaggataa acctggtcct tatcgacgat cagcggtaaa cgaagacttc
    18361 ttgcccgatt gtcccagatg atgtcaagaa atcgggaaaa ggggagatta tccctgcgtt
    18421 tgtatatcaa acaggttggg gtcagaaagt caaagcagtc tggagatagc cgcatccatt
    18481 ccagtaggtc ttctttcttc agttgctcaa agtccaccag ctcatatgca atgccataag
    18541 catctagggt ctcaatcaag gactggtgtc ggtcttggtg tttacttaga tagagtcgca
    18601 tatcacaccc tccttgacct tagtcaggtc ttccatcaca aacccaccaa ggattctggt
    18661 catattgaca ggaaccctgc cctcactaaa gtatttcact gttactaggc tcatcaggat
    18721 accgtccttg ccttgatggg tgtaattctg cccataggct ctaaaagcca aatccccatc
    18781 gtccgtcaag aaactatcca caccgttttt gatgtccttc tcctccaaga actcaaagag
    18841 ccgatggaga ttggattcgt aaaagagagg aaaattcatt gccttgtgat agtcatcctc
    18901 aaaagtcacg cttatctcac agtcataatt tggcaaggaa agtagccttt ctgtcagtcg
    18961 ctccacctct gcttgatgaa tagcctcatc caactctgaa caggttctta tggattcttt
    19021 atgtagtagt ttcatgcttc tcctccaatt tctttaattc tcctgcgata gcagcgataa
    19081 caggaactga aacactgttt ccagcctgct tatagagctg actcttactt gaaaccgcct
    19141 ctgcccgatc gaaagcccaa tctggaaagc cttgtaggcg aaaacactct cttggtgtga
    19201 gcttgcgaat cctcaaacga taaagtttat ctcccaccaa aaatcctgtc acctcaaacc
    19261 atttgtcctt gcggtattcc agggctgcga taacgacacc ttgttgggag ctggtcgtta
    19321 gggtgttggc catctgtttg cctacccgtc cacgtttaga attggacttg ggataggaca
    19381 ggttgaccga atcgccaact gtcgccttgg catagccttg cttagtcgcc tcacggattt
    19441 ttaagtgtgg cgcttcgtga cgaagcaaga cttttggaat cttatcccca ccctgcatgg
    19501 tggtgagggt cggggaaaga ccctctgtat gataaactcg tcctgcttga tcaaagctag
    19561 tcggcaaatt tccagccact agtaccccat gcctgtcttg agccgttagg gtaaacatgg
    19621 ggtcttgatt atccttgaat cgtctaccat tctgtcgttt atcaagcctg tctggtgtta
    19681 agactggaat ggcaatctta acaccctcac ccttatttac ggttaaagtt ggcgacagtc
    19741 ccgttgatag atagacctcc ccactcatcc cctttccaga tggattgaca tttcctagtc
    19801 ggtcaagatg agctgggcta ccttgtcctc ggagaggaaa tactggtcgg aaacctcgct
    19861 ttcgagaatg tccgataaga aagacccgct cccgattttg gggaaggccg aaatctttac
    19921 tgttaagcac ctgccactcg acatgatacc ccaattcatc caacgtattg aggattgtgg
    19981 cgtacgtccg tccctggtcg tgactgagta accccttgac gttctcaaaa aatagataag
    20041 atggttgaat ttccttggca catcgagcaa
//
LOCUS       DASFQD010000032        20064 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.032, whole genome shotgun sequence.
ACCESSION   DASFQD010000032 DASFQD010000000
VERSION     DASFQD010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 20064)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20064)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20064
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.032"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..1005)
                     /locus_tag="U1021_000881"
     CDS             complement(<1..1005)
                     /locus_tag="U1021_000881"
                     /inference="COORDINATES: protein motif:HMM:NF019142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G5 domain-containing protein"
                     /protein_id="HEM4711438.1"
                     /translation="MKQNSGQTVHRFSLRKTSFGLVSATIASLFMLFSFSSERKVFAE
                     DSAKTVHYRYIAEDELTASEKQLIVNELPKLVEESDNAYYLIYKPKQSVSEGILPATG
                     DEWFGQVIGALVGAGLLILAIRKGRKGKKEFAGLFILGATGSLLLAPPAFSLTNQTLA
                     RFNQELSISVGEQLPEPMAIEGYRYIGYIKEGKSDEIAKPIHPNSELLGTDNAVNPDK
                     PSLAVEHVDSVQTEPVAYDTLEFPNSELLAGETVVSQEGVDGVRTIVTRSYTVDGQVV
                     KTEEISNTITTPATPRIVQVGTKVVEEVAKDAPSHELPSLDIVESDTSYTELVAYETQ
                     E"
     gene            complement(1790..2575)
                     /locus_tag="U1021_000882"
     CDS             complement(1790..2575)
                     /locus_tag="U1021_000882"
                     /inference="COORDINATES: protein motif:HMM:NF017946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 family transporter protein"
                     /protein_id="HEM4711439.1"
                     /translation="MTRYFYLYIHFMKLQWKRYIQYREDAVIGMIGYSVNTVISIYVL
                     KVFLDNLSNFPGWSTNELVLLFGFVTMARAGWNLIFINTLFIGDYVREGTFDVLLLRP
                     VNTLLLIIFSKIDFESIGEFCIGLIIFWMALLTEFETLSAWFILKIILLLIGSILCYA
                     AIHLFVNSLTFFIKDVYSINFIVWRLDETTRYPNSIYPSWLSILLWFIPYAFIGYFPL
                     MSITKSLPLLADLGTISAGYIIFLLVYKIVWKFSISRYHSYRQ"
     gene            complement(2578..3354)
                     /locus_tag="U1021_000883"
     CDS             complement(2578..3354)
                     /locus_tag="U1021_000883"
                     /inference="COORDINATES: protein motif:HMM:NF017946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 family transporter protein"
                     /protein_id="HEM4711440.1"
                     /translation="MNVLAYTIAEFKRRKSYRVSTILTILGAFLVVAIQISVWTSVVT
                     ENTSSQLVLYAVISRMMFILFPDHRTASIISEMIQKGDTAVYFLRPHSFMGMHFFRQV
                     GSFVYDLIFVVTPLTFALVFYSFVTGISLVPEMVLSFIMSALLGLLISFLFGYLLGLL
                     SIRFNQILGVLEFYDALLMLFGGSVLPINFFPEMLQKLIVLTPFYAMLSVPSSILSAL
                     LPAQYVLQQLCLQMFWVLLLALFISMYQKKLFKVMNYYGG"
     gene            complement(3692..5239)
                     /gene="purH"
                     /locus_tag="U1021_000884"
     CDS             complement(3692..5239)
                     /gene="purH"
                     /locus_tag="U1021_000884"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006146083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEM4711441.1"
                     /translation="MTKRALISVSDKNGIVEFAQELTKLGWEIISTGGTKVALNQAGV
                     ATIAIDDVTGFPEMMDGRVKTLHPKIHGGLLARRDLDSHLQAANDHEIGLIDLVVVNL
                     YPFKETILRSDVTYDLAVENIDIGGPSMLRSAAKNHASVTVVVDPADYPTVLGEIAEQ
                     GQTTYSTRQRLAAKVFRHTAAYDALIAAYFTKQVGEDKPEKLTITYDLNQPMRYGENP
                     QQHADFYQNALPTDYSIASAKQLNGKELSFNNIRDADAAIRIIRDFKNRPTVVALKHM
                     NPCGIGQAETIEQAWDYAYEADPVSIFGGIVVLNREVDAATAEKMHPIFLEIIIAPSY
                     SAEALAILTNKKKNLRILELAFDAQDVSEVEKEFTGVIGGLLVQDQDVVVESPADWQV
                     VTERQPSEQEWAAMEFAWKSSKYVKSNGIIITNDKMTLGVGPGQTNRVASVRIAIEQA
                     KDRLDGAVLASDAFFPFADNVEEIAAAGIKAIIQPGGSVRDQDSIDMANKYGLTMVFT
                     GVRHFRH"
     gene            complement(5249..5800)
                     /gene="purN"
                     /locus_tag="U1021_000885"
     CDS             complement(5249..5800)
                     /gene="purN"
                     /locus_tag="U1021_000885"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEM4711442.1"
                     /translation="MKRIAVFASGNGSNFQVIAEQFEVAFVFSDHRNAYVLERAEKLG
                     VPAFAFELKEFADKQVYEEALIQLLDQHQIDLVVLAGYMKIVGPTLLAQYEGRIINIH
                     PAYLPEFPGAHGIEDAWQAGVSESGVTVHWVDSGIDTGQIIQQVRVPRLADDTLETFE
                     TRIHEAEYQLYPAVLEELGAVKN"
     gene            complement(5797..6819)
                     /locus_tag="U1021_000886"
     CDS             complement(5797..6819)
                     /locus_tag="U1021_000886"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009729529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEM4711443.1"
                     /translation="MTNKNAYAQSGVDVEAGYEVVERIKKHVARTERLGVMGALGGFG
                     GMFDLTKLDVKEPVLVSGTDGVGTKLMLAIQYDKHDTIGQDCVAMCVNDIIAAGAEPL
                     YFLDYIATGKNEPAKLEQVVAGVAEGCVQAGCGLIGGETAEMPGMYGEDDYDLAGFAV
                     GIAEKSQIIDGSKVQEGDILLGLASSGIHSNGYSLVRRVFADVSGDALLPELNGRAMK
                     DVLLEPTRIYVQQVLPLVKAGLVNGIAHITGGGFIENVPRMFADNLAAEIEEDKIPVL
                     PIFTALETYGHIRHEEMFEIFNMGIGLVLAVSPDKVDSVCQLVDEEVYTIGRIIAKED
                     KSVVIK"
     gene            complement(6876..8330)
                     /locus_tag="U1021_000887"
     CDS             complement(6876..8330)
                     /locus_tag="U1021_000887"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009908857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEM4711444.1"
                     /translation="MTYEVKSLNEECGVFGIWGHPQAAQVTYFGLHSLQHRGQEGAGI
                     LANDGGFLRRHRDTGLIAEVFKKSEDLDRLTGTAAIGHVRYATSGSASIHNIQPFLFD
                     FADMQVGLAHNGNLTNAVSLKAELEKNGSIFSSSSDTEILMHLIRRSHNPDFMGKIKE
                     ALNTVKGGFAYLIMLEDKLVAALDPNGFRPLSIGKMKNGAWVVASETCAFEVVGAEWV
                     RDVDPGEIVVIDDSGIQYDSYTRDTQLAVCSMEYVYFARPDSVIHGVNVHTARKNMGR
                     RLAQEFKYEADIVVGVPNSSLSAASGFSEESGLPNEMGLIKNQYTQRTFIQPTQELRE
                     QGVRMKLSAVSSIVKGKRVVMVDDSIVRGTTSRRIVQLLREAGAAEVHVAIGSPELKY
                     PCFYGIDIQTRRELISANHTVEEVCEIIGADSLTYLSLEGMIEAIGIDTDAPKGGLCV
                     AYFDGEFPTPLYDYEEEYLRSLEEKTSFYIENVK"
     gene            complement(8333..12052)
                     /locus_tag="U1021_000888"
     CDS             complement(8333..12052)
                     /locus_tag="U1021_000888"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001042262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HEM4711445.1"
                     /translation="MAKRIFVEKKADFQIKAEALRKELTHNLQLTSLTSVRLVQVYDV
                     FHLEEDLLEQAIKHIFTEQVTDKVLSEAELGLEGAVYFAIEALPGQFDQRAASSQEAL
                     LLLGSRQEVRVNTGQLYILNGDVQEEELAAIKNYLLNPVDSRFKDMDAPLVAQEFSVS
                     DTTIPSLDFFDNFGAEEFAAYKREAGLAMEVEDLLFIQDYFKSIGRVPTETELKVLDT
                     YWSDHCRHTTFETELKSIDFSASKFQKQLQATYDKYLAMRTELGRTDKPQTLMDMATI
                     FGRYERANGRLDDMEVSDEINACSVKIEVDVDGVKEPWLLMFKNETHNHPTEIEPFGG
                     AATCIGGAIRDPLSGRSYVYQAMRISGAGDITQPLTATRSGKLPQQIISKTAAHGYSS
                     YGNQIGLATTYVREYFHPGFVAKRMELGAVVGAAPKENVVREKPVAGDVVILLGGKTG
                     RDGIGGATGSSKVQTVESVETAGAEVQKGNAIEERKIQRLFRNGDVTRLIKKSNDFGA
                     GGVCVAIGELADGLEIDLDKVPLKYAGLNGTEIAISESQERMSVVVRPEDVDTFIAAC
                     REENIHAVVVAKVTEKPNLVMTWNGQTIVDLERSFLDTNGVRVVVDAKVVDSAVNLPE
                     TRTTSAETLQEDLKNLLSDLNHTSQKGLQTIFDSSVGRSTVNHPLGGRHQLTPTESSV
                     QKLPVQQGVTTTASVMAQGYHPYLADWSPYHGAAYAVIEATARLVATGANWSKARFSY
                     QEYFQRMDKQAERFGQPVAALLGSIEAQIQLGLPSIGGKDSMSGTFEDLTVPPTLVAF
                     GVTTADSRKVLSPEFKAAGEYIYYLPGQILSEDIDFALIKSNFETFEKWQSDYAITAA
                     SAVKYGGVLESLALMSFGNQVGARVELADLETSLTGQLGGFVFTSKEDIPDAVKIGQT
                     TTDFTLVVNGVNLAGQDLQAAFEGKLEEVYPTEFEQATDLQDVPAITSSAVIQAKERV
                     DVPLVYIPVFPGTNSEYDSAKAFEQAGAKVNLVPFVTLDAASIENSVKTMVDNITKAN
                     ILFFAGGFSAADEPDGSAKFIVTILRNAKVRSAIDQFIEKGGLIIGICNGFQALVKSG
                     LLPYGNFEEAGETSPTLFYNDANQHVAKMVETRIANVNSPWLAGVQVGDIHAIPVSHG
                     EGKFVVTDEEFAVLRDNGQIFSQYVDFTGQPSMDSKYNPNGSSHAIEGITSRNGQIIG
                     KMGHSERYEDGLFQNIPGKKDQELFVSAVRYFTGK"
     gene            complement(12065..12772)
                     /locus_tag="U1021_000889"
     CDS             complement(12065..12772)
                     /locus_tag="U1021_000889"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEM4711446.1"
                     /translation="MKTDLLYSGKAKDIYATADSDQIVAVYKDQATAFNGGKKEQITG
                     KGRLNNLISSLIFEKLNEAGVKTHFIKRLSDTEQLNKKVEIIPLEVVLRNVTAGSFSK
                     RFGVEEGIVLPTPIVEFYYKKDELDDPFINEEHIAFLNLASSEEIAYIKEETRRINAF
                     LKDLFAQIGLNLVDFKLEFGIDSTGQILLADEFSPDNCRLWDADGNHLDKDVFRRGLG
                     ELTEVYEVVLAKLQEVK"
     gene            complement(12890..13138)
                     /locus_tag="U1021_000890"
     CDS             complement(12890..13138)
                     /locus_tag="U1021_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEM4711447.1"
                     /translation="MTREQIYQRVVELIQDEKGEDFKVQPESTLADNIAADSVEIMEF
                     VLTLEDEFGVDIPDAAIERFETLSDIVDFIYEELQKRS"
     gene            complement(13131..14138)
                     /gene="plsX"
                     /locus_tag="U1021_000891"
     CDS             complement(13131..14138)
                     /gene="plsX"
                     /locus_tag="U1021_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEM4711448.1"
                     /translation="MKRIAVDAMGGDHAPQAVVEGVNQALAAFPDIEIQLYGDEAKIK
                     QYLTATERVSIVHTTEKINSDDEPVKAIRRKKEASMVLATKAVKDGQADAVLSAGNTG
                     ALLAAGVFVVGRIKNIDRPGLMSTLPTMDGKGFDMMDLGANAENTAHHLYQYGILGSF
                     YAEHVRGVKQPRVGLLNNGTEDTKGTPVHQEAYKLLAEDKSINFIGNVEARELLNSVA
                     DVVVTDGFTGNAVLKTIEGTAKSIVGQLTGSIKNGGLRAKLGGLMVKPTLKKALGAMD
                     YKTAGGAVLLGLKAPVIKAHGSSDAQSIFYTIKQTRSILEAGIVEKSVAKFSVVEESH
                     D"
     gene            complement(14135..14917)
                     /gene="recO"
                     /locus_tag="U1021_000892"
     CDS             complement(14135..14917)
                     /gene="recO"
                     /locus_tag="U1021_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEM4711449.1"
                     /translation="MERIETRGLVLYNRNFREDDKLVKIFTEKAGKRMFFVKHASKFR
                     LVASIQPLTYADFIVKINDDGLSYIEDFHQVQPFKAINADIFKLSYATYILALADAAL
                     QDKVYDPALFSFLVKTLDLMESGLDYEVLTNIFEIQLLGRFGVSLNFHECAFCHRVGL
                     PFDYSYKYSGVLCPQHYQQDERRAYLDPNVPYLLDQFQAISFDELETISIKPEMKRKL
                     RLFIDQLYEEYVGIHLKSKKFIDDLSSWGQIMKPGTENEETE"
     gene            complement(14904..16082)
                     /locus_tag="U1021_000893"
     CDS             complement(14904..16082)
                     /locus_tag="U1021_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM4711450.1"
                     /translation="MDLLNRFNKNLNRIEVSMIRQFDQSISDVPGILKLTLGEPDFTT
                     PDHVKEAAKAAIDANKSYYTGMAGLLELRQAAAEFVAEKYNLHYNPENEILSTIGATE
                     ALSASLVAILEAGDTVLLPAPAYPGYEPIVNMVGADVVEIDTTANHFVLTPEMLEEAI
                     IEQGDKLKAVILNYPANPTGVTYSREQIRAFADVLRKYPVFVLSDEVYAELTYTGQPH
                     TSIAEFLPEQTILIQGLSKSHAMTGWRIGLIMSQAPIIAQIIKSHQYLVTAASTAMQY
                     GAVEALKNGKDDALPMRAEYVKRRDYIIEKMTDLGFKIIKPDGAFYIFAKIPAGYNQD
                     SFSFLQDFARKKAVAFIPGAAFGQYGEGYVRISYAASMEKIQTAMARLKEYLEENGTN
                     "
     gene            complement(16169..17137)
                     /locus_tag="U1021_000894"
     CDS             complement(16169..17137)
                     /locus_tag="U1021_000894"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HEM4711451.1"
                     /translation="MAFTDLKLFALSSNQKLAEQVSKKIGIPLGKSSVRQFSDGEIQV
                     NIEESIRGTHVYILQSTSSPVNDNLMEILIMVDALKRASAESVNVVMPYYGYARQDRK
                     ARAREPITSKLVANMLQTAGVNRLLTIDLHAAQIQGFFDIPVDHLMGAPLIADYFERR
                     GMVGDGYVVVSPDHGGVTRARKLAQFLKTPIAIIDKRRSVDKMNTSEVMNIIGDIKDK
                     TCILIDDMIDTAGTICHAADALADAGATAVYASCTHPVLSGPAMDNISKSAIKKLVVL
                     DTIEIAEDRLIDKIEHISTAELLAEAIIRIHEKRPLSPLFEASRVK"
     gene            complement(17240..18481)
                     /locus_tag="U1021_000895"
     CDS             complement(17240..18481)
                     /locus_tag="U1021_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HEM4711452.1"
                     /translation="MKKKILATIMLSTVVLSNANYVAVISANDVDSQIAAKNQQISEL
                     TAQQAEAQQQVDAIQGQVDAIVSEQAKLTEENTRLEAESQALAADIERLSADIVSRDG
                     ALKEQARSAQVDGSASSYINTILDSKSIVDAVSRVNAMREIVSANNRMLEQQKADKEA
                     IAEKQKANQEAITTLAANRQKLEDDAQVLQVRQAELEAAKLNLAVQKATAEDEKNSLL
                     AQKAAAEEAARQAAARQAEYQAQQAALAQQQVASVSAPVVSTPVETTVTETVATVSQS
                     TPTVSTPTTSISSGSGSSAAANNARYDASSYPIGECTWGVKSQLSWVGPYWGDAKQWL
                     ASARAEGFSTGSTPQVGAIAVWTGGYYGHVAVVTAVQSSTSIQVVESNYMGRRYIGNH
                     RGWFNPTTTSEGAVYYIYPPY"
     gene            complement(18566..19081)
                     /gene="mreD"
                     /locus_tag="U1021_000896"
     CDS             complement(18566..19081)
                     /gene="mreD"
                     /locus_tag="U1021_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HEM4711453.1"
                     /translation="MRNKMIEIFMFPILFFILLLDGQISTLVTNWSVGLFTISSHLVL
                     MLAIFYANYVSLGFSLFIFTLLGLVYDISYLNLIGIATTTLPLVLYCIYFFFQGAVSK
                     RGINILILLVAIFQFEFISYSFARIFHITNLSVFIFVFNKLLPSLLFNLVLFFVLQPS
                     FERLFGITNKT"
     gene            complement(19071..19907)
                     /gene="mreC"
                     /locus_tag="U1021_000897"
     CDS             complement(19071..19907)
                     /gene="mreC"
                     /locus_tag="U1021_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEM4711454.1"
                     /translation="MNKFSKLVVVVSIFLLLSFSLLFVTFSKGLQVPYLNNIVRVVVT
                     PIQSVISVPTRFFSEQKDVLTDLVNAYEENKQLKEAIMSLEGMAAENTSLKEENASLR
                     SSLGVVSDFPEKQLIPGSVLVRTPSAWSEHIAINIGETSGVTSNALVVANGGLVGIVS
                     SLSSDSAVVTLFTNSDEFTKLPVKISVDSKEIYGILSGYDADTNSFIIDQLNSADEIA
                     VGSNVVTSDLAGATSANIQIGKVLSVKSNSNSLNREVYVEPTASFSNIYSVLVVGQTN
                     AQ"
     gene            complement(19967..20054)
                     /locus_tag="U1021_000898"
     tRNA            complement(19967..20054)
                     /locus_tag="U1021_000898"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(20018..20020),aa:Ser,seq:gct)
BASE COUNT         5898 a         4858 c         3763 g         5545 t
ORIGIN      
        1 ttcttgggtt tcataagcga cgagttcagt atagcttgta tcactttcca caatatctag
       61 gcttggcagt tcatgacttg gagcatcctt tgcgacttcc tctacgacct tggtaccgac
      121 ttgaacgatt cttggagtag ctggggtcgt tatcgtgttc gaaatctcct cggtcttaac
      181 aacctgacca tcgacagtat agctacgggt gacaatggtg cgtacgccgt caactccttc
      241 ttggctgaca actgtctcac cggctaggag ttcgctattc ggaaactcaa gggtatcata
      301 agcgacgggt tcagtttgaa cactatctac atgctcaact gccaaacttg gtttatccgg
      361 attgacagca ttgtctgtac ccagtaactc agagttagga tgaataggtt ttgctatttc
      421 atcactctta ccttccttta tgtaaccaat atatctatag ccctcaatag ccatcggttc
      481 tggcaattgt tcacctacac tgatagataa ttcctgatta aatcgagcca aggtttgatt
      541 ggttaaagaa aaggcaggag gtgctaataa caatgagcct gtcgccccta aaatgaacaa
      601 tcccgcaaac tcttttttcc ccttacgacc tttacggata gccaaaatca gcaaccctgc
      661 tccaacaagt gctcctatta cttgcccaaa ccattcatca ccagtagcgg gcaaaatccc
      721 ctctgatact gactgctttg gcttataaat caagtaatag gcattatcac tttcttctac
      781 taatttcggt aattcattta cgattaattg cttttctgac gctgttaatt catcttctgc
      841 aatatagcga taatgcactg ttttggcact atcttcagca aatacctttc tttctgaaga
      901 aaatgaaaac agcatgaaaa gactagcaat ggtagcagat actagtccaa acgatgtttt
      961 tctcaaagaa aagcgatgaa cggtctgtcc agaattttgt ttcatataat atacttcctt
     1021 aatattttat agaaaaatca aaagcaaaca ttttcggcct cacgtgcatt tagaaaaaag
     1081 aaaagaattg cgtgcaagct atcccaaatt tcctctgcga aagatagtct gattttgatt
     1141 aagtggtcag tttgtttcag tagcccacct tgaacgaaag atggttggca gttgagctag
     1201 cacttggtta aaccattaaa gtaaaactga aggactataa tacgcatatt aaaaaatctc
     1261 tctaatccaa tattaaagat tacagagttc caatttacct ttataccatc agttcctatt
     1321 tcaagaccag gtgtagctcc cagtacctat tctcaaaatc tatgccaaat ctcagtatag
     1381 cgattgtatc gcaataatac caactactga ctgacaattc acacaccttt ttgttagatg
     1441 gtacattccc ccttccccag tttcaaaaat cttgttgatc ccgctacgat atacatggga
     1501 tatgatatag aatcctcttg caagcacagc aaaaataaac aaaacctatc tcactggcta
     1561 gagtcgcaat tagctaactg ttcctagtct tttagcttga tagctggtaa actgaaaacc
     1621 tgctggaaat cttcatgcgt caaagcaata aaagaccgac tgaatagcta tctgtagact
     1681 tctggtttca cgcaccatta tactagaatc tgaggaatat tgcaacacag atagtcataa
     1741 atcattatgt tattcttatt ttctccgatt ccaaaataaa tccctaaatt tactgcctat
     1801 aactatgata acgactaata ctaaatttcc aaacaatctt ataaacaagt aaaaatatga
     1861 tatagccagc agaaatagtc cctaaatctg ctaagagagg taatgatttt gttattgaca
     1921 tcagtgggaa atatccaata aatgcatatg gaatgaacca taataatatt gataaccagc
     1981 taggataaat actatttgga tagcgagttg tttcatccag tctccaaaca ataaagttaa
     2041 tggaatacac atctttgata aaaaatgtta atgagttaac gaagaggtgg attgctgcgt
     2101 aacataaaat actacctatt agtaaaagga tgattttcag tataaaccaa gccgataacg
     2161 tttcaaattc tgtaagcagt gccatccaaa atattatcag accaatacaa aattcgccaa
     2221 tactttcaaa atctatcttt gaaaaaatga tgagtaatag ggtgtttact ggcctaagta
     2281 ataagacatc aaatgttcct tctctgacat aatctccaat aaataaggtg ttgatgaaaa
     2341 tcaaattcca gccagctctg gccattgtta caaatccaaa caagagtact aactcatttg
     2401 tagaccatcc aggaaaattt gatagattat ctaaaaatac ttttaaaaca tagattgaga
     2461 taacagtgtt cacgctatag cctatcattc caatgacggc atcttctcta tattggatat
     2521 acctcttcca ttgaagtttc ataaaatgaa tatacaagta aaaatatctt gtcatcacta
     2581 acctccataa tagttcatca ctttaaatag cttcttctga tacatagaaa taaataaagc
     2641 cagaaggaga acccaaaaca tctgtaagca caattgttgt aaaacatatt gggctggtaa
     2701 taaagccgat aaaatagatg aaggaactga taacatagca tagaaaggag ttaaaacaat
     2761 aagtttttgc aacatttctg gaaaaaagtt aataggtaat actgatccac caaaaagcat
     2821 caacaaggca tcgtaaaatt ctaaaacacc taaaatctga ttaaaacgga tagataaaag
     2881 ccctaagaga tagccaaata aaaacgaaat caatagacct aatagagccg acatgataaa
     2941 tgatagcacc atttcaggaa caagagatat tcctgtaacg aatgaataaa agacaagagc
     3001 aaacgtcaag ggagtgacta caaaaatcaa atcataaaca aatgaaccta cttgtctaaa
     3061 aaaatgcatc cccataaaac tatggggtct taaaaaatag actgccgtat cacctttttg
     3121 aatcatctct gaaataatgg aggcggtacg atgatctgga aaaagaatga acatcatcct
     3181 agaaattact gcatatagaa cgagttgaga tgatgtgttt tcagtgacta cactggtcca
     3241 aaccgaaatc tgaatggcta caaccaaaaa ggcaccaaga attgtcaaaa tagtactcac
     3301 cctatatgat tttcgtctct taaattctgc tattgtataa gctaatacat tcaccttgat
     3361 gtctccttat ccaataataa tatatccgct aaacttggat ctgtaatatg ataatctctg
     3421 attttttggt ctttgacaaa ctcttgaagt aaatctaatt tctcttcttc aatcaacatt
     3481 tcagtcattg aagcgaggct gggtaaaaac tagccaataa ctaaaaaata cacagacaaa
     3541 ttgagctgct tcagatgaaa ttcagccgaa ctgtctgtgt ttttctttct gtttatactc
     3601 tcttggacta atttcttagc caatttcgta agattcatgc tcattagaag gaatcctatc
     3661 tcagtttttc ccagtctcta gatataggct ctcaatgtct aaaatgtctg actcccgtaa
     3721 agaccatggt caaaccgtat ttgttggcca tgtcaatgga gtcttggtcg cgaacagagc
     3781 ctcctggttg gatgatagcc ttgatacctg cggctgcaat ttcttccacg ttatcagcaa
     3841 atgggaagaa ggcatctgac gccaaaacgg ctccatccaa acggtccttg gcttgctcga
     3901 tggcgatacg gacagacgcc acacggttgg tttgtcccgg ccccacgccc aaggtcatct
     3961 tgtcattggt gatgatgatg ccgttggact tgacatactt ggaggacttc caggcgaact
     4021 ccatagccgc ccactcttgc tcggacggtt gccgctcggt caccacctgc cagtccgctg
     4081 gactttccac caccacgtcc tgatcctgca ccaagagtcc gccgataacg cctgtgaact
     4141 ctttttccac ttcgcttaca tcctgtgcgt caaaggccaa ctccaaaatc cgaagatttt
     4201 tctttttatt ggtcaaaatc gctagcgctt ctgccgagta gctcggtgcg atgatgattt
     4261 ctaagaaaat cgggtgcatc ttttcagccg tcgcagcatc tacttccctg ttcagcacga
     4321 caatgcctcc gaaaatcgat actgggtcag cctcataggc ataatcccaa gcctgctcaa
     4381 tagtctctgc ctgcccaata ccacaagggt tcatgtgttt gagtgctaca acagttggac
     4441 ggttcttgaa atcacgaata atccggatag ctgcatccgc atcacgaatg ttgttgaagg
     4501 acaactcctt accgtttagc tgtttagcag aggcaatcga ataatctgtt ggaagggcat
     4561 tttggtagaa atccgcatgt tgctggggat tttctccata gcgcataggt tgattgaggt
     4621 cataggtaat ggtgagtttt tcaggcttgt cttcgccgac ttgcttggta aagtaggctg
     4681 caatcaaggc gtcgtaggct gcggtgtgac ggaagacctt ggctgccaat cgctgacgcg
     4741 ttgagtaggt cgtctgcccc tgctctgcta tttcccctaa aaccgtcgga taatctgccg
     4801 gatccacaac aactgtcacg ctggcgtggt tcttggccgc agaacgaagc atagacggac
     4861 cgccgatgtc gatgttctcc accgccaagt cgtaggtcac atctgaacgc aaaatagtct
     4921 ctttgaaggg ataaagattt accaccacca agtcaatcag gccaatttca tggtcgttag
     4981 ctgcttgtag gtgactgtcc aaatcccgac gagccaacaa gcccccgtgg attttggggt
     5041 gcagggtctt gacacggccg tccatcattt caggaaaacc ggtcacatca tcaatggcaa
     5101 ttgtcgctac acccgcctga ttcaaggcaa cctttgtgcc tcctgtcgag atgatttccc
     5161 agccaagctt ggtcaattct tgggcaaatt ctacaatacc atttttatct gatacgctaa
     5221 ttaacgcacg ttttgtcatg atttctcctt aatttttcac tgcccccaac tcctccaaaa
     5281 ctgctggata gagttggtac tccgcttcat gtattcttgt ttcaaaggtt tccaaggtat
     5341 catcggctag tctaggcact cgaacttgct gaataatttg tcctgtgtca ataccactat
     5401 ccacccagtg gactgttacg ccactttcag atacaccagc ctgccaagca tcttcaatcc
     5461 catgagcacc tggaaattcc ggcaaatagg ctgggtggat attaatgata cgaccttcgt
     5521 actgagccag cagagttggt cccacaatct tcatatagcc tgccaatacc accaaatcaa
     5581 tctggtgctg gtctaagagt tggatgagtg cttcttcgta gacctgctta tccgcaaact
     5641 cttttaattc gaatgcaaag gctggtactc ctagtttttc agctcgttcc aggacatagg
     5701 cgtttctgtg gtctgaaaag acgaatgcta cttcaaactg ctctgcgatg acttggaaat
     5761 tggagccgtt gcctgatgca aacactgcta ttcgtttcat ttgatgacca cactcttgtc
     5821 ttccttggcg atgatgcgac caatagtgta aacttcctcg tcaactagtt gacagacact
     5881 gtcaaccttg tctggactga cagccaatac caaaccgata cccatattga agatttcaaa
     5941 catttcttca tgtctgatgt ggccgtatgt ttctagggct gtaaagattg gaaggactgg
     6001 aatcttatct tcttcaatct cagctgctaa gttgtccgca aacatacgag gcacattttc
     6061 gataaatccg ccgcctgtga tatgggcaat gccgttgacc agccctgctt ttaccagagg
     6121 caacacctgc tggacataga tacgggtagg ctctaggagg acatccttca tagctctgcc
     6181 attgagctct ggcaacagag cgtcgccaga aacatctgca aaaacgcgtc ggacaaggga
     6241 atagccgttg gagtggatgc cgctggaagc taggccgagg agaatgtcgc cctcctggac
     6301 cttactgccg tcaataatct gggacttctc cgcaataccg acagcaaagc cagctaggtc
     6361 atagtcatcc tcaccgtaca taccaggcat ttcagccgtc tcaccgccaa tcaagccaca
     6421 accagcctgg acacagcctt ccgcaacacc tgcaaccacc tgctccagct tggctggttc
     6481 attttttcct gtcgcaatgt agtcgaggaa gtaaagtggc tccgcacctg ctgcgataat
     6541 atcgttgaca cacatagcca cgcagtcctg accaatcgta tcatgcttgt catactggat
     6601 agccagcatg agcttggttc ccacaccgtc tgtcccagat accaagactg gctctttgac
     6661 atccagcttg gtcaggtcaa acataccacc aaaaccaccg agggctccca taacacccaa
     6721 acgttctgtc cgagccacat gcttcttaat ccgctcaacc acttcataac cagcttcgac
     6781 atcaacacct gattgggcat aagcattttt atttgtcatt gtttttcctt tcaacagttt
     6841 acaggtctgt caagcatact tgacaactct gtcacttact tgacattctc gatataaaaa
     6901 ctcgttttct cttctaggct acggagatat tcttcctcat agtcatagag aggagttgga
     6961 aattctccgt caaaataggc cacacagagt ccaccttttg gagcatcggt gtcgatacca
     7021 atggcctcaa tcatcccttc aagagaaagg taggtcagac tgtcagctcc gataatctca
     7081 cagacttcct caaccgtatg attggctgaa atcaattccc gacgggtctg aatgtcaata
     7141 ccatagaaac aagggtactt gagttcagga cttccaatag ctacatgaac ttccgctgct
     7201 cctgcttctc tcaatagctg aacgatgcga cggctggtcg tgccacggac aatggaatca
     7261 tcaaccataa ctactcgttt accctttaca atgctagaaa cggctgacaa tttcatccga
     7321 acaccttgtt cgcgaagctc ctgagtcggt tggataaatg tccgctgggt atactgattt
     7381 tttatcaacc ccatttcatt gggcagaccg gattcttctg agaatccact ggctgcggag
     7441 agagaggagt ttggtacacc gacgacaata tctgcctcgt atttaaattc ctgggccaaa
     7501 cgacggccca tgttttttct agccgtatgg acattgactc catgaataac cgagtccggt
     7561 cgggcaaaat agacatattc catagagcag actgccagct gcgtgtctct tgtatagcta
     7621 tcatattgaa ttcctgaatc atcaatgacg acaatttcac caggatccac atctcgcacc
     7681 cattcagccc ccactacttc aaaagcacag gtttcgctag ccactaccca ggcaccattt
     7741 ttcatctttc caattgaaag tggacggaaa ccattaggat ccaaggccgc aaccaatttg
     7801 tcttccaaca taatcaggta agcaaagcca cctttaacag tattgagagc ttccttaatt
     7861 tttcccataa aatctggatt gtgactgcgg cgaatcaagt gcatcaaaat ctctgtgtct
     7921 gaggaactag aaaagattga accgttcttt tccaactcag ccttcaagct gactgcattg
     7981 gtcaaatttc cattatgtgc caaacccacc tgcatatctg caaaatcaaa taggaagggc
     8041 tggatattat ggatagatgc tgaacctgag gttgcataac gaacatgacc aatagcagcc
     8101 gttcctgtca agcgatccaa atcttctgat tttttaaaga cttccgcaat caagcctgta
     8161 tcccgatggc gacgcaagaa acctccatcg ttagctaaaa ttcctgctcc ttcttgccct
     8221 cggtgctgca aactgtggag gccaaaatag gtcacctgag cagcctgcgg atgtccccaa
     8281 atgccgaaaa caccgcattc ttcgttgagt gatttaactt cgtatgtcat atttattttc
     8341 ctgtaaaata gcgaactgct gaaacaaaga gctcttggtc tttcttacct ggaatattct
     8401 ggaaaagacc gtcctcataa cgctccgaat gccccatttt cccgataatc tgaccgttgc
     8461 gactggtaat accttcaatc gcatggctgg atccatttgg attgtactta gaatccatgc
     8521 ttggctgacc tgtaaagtca acgtattggc tgaaaatctg cccattgtcc cgcaagacag
     8581 cgaattcttc atccgtcacg acaaattttc cttccccgtg tgaaactggt atagcgtgaa
     8641 tgtcaccgac ttggacacct gccagccaag gggagttgac attggcaatc cgcgtttcca
     8701 ccattttggc aacgtgctgg ttagcatcgt tgtagaagag ggtcggactg gtttctcccg
     8761 cctcctcaaa gtttccatac ggcagcaagc ccgatttgac aagggcctgg aagccattgc
     8821 agataccgat gataaggcca cctttttcga taaattgatc aatagcagag cggaccttgg
     8881 cgtttcgtaa gatggtcacg ataaacttgg cagacccgtc tggctcatcc gcagctgaaa
     8941 atccacctgc gaagaaaaga atattggcct tggtaatatt gtcaaccata gttttaaccg
     9001 agttttcaat gcttgctgca tctaaagtca caaatggcac cagattaacc ttggcaccag
     9061 cctgttcaaa ggccttggct gagtcatatt ctgagttggt tcctggaaag actgggatgt
     9121 aaacaagcgg aacatcaact ctttccttgg cttgtataac tgctgaactg gtaattgcag
     9181 gaacatcctg taagtctgta gcctgttcaa attctgttgg gtaaacttct tctagtttgc
     9241 cttcaaaggc tgcctgcaag tcctgtcccg caagattgac accattgaca actagtgtaa
     9301 agtctgttgt cgtttgaccg attttcacag catctggaat gtcttctttc gatgtgaaaa
     9361 caaagccacc tagctgacct gtcaagctag tttcaaggtc tgcaagctca actcttgctc
     9421 cgacttggtt accaaaggac ataagggcta gactttctaa gacaccacca tacttgactg
     9481 cgctagcagc cgtaatcgca taatcgctct gccatttttc aaaagtctca aaattagact
     9541 tgatcaaggc aaaatcaatg tcttctgaca aaatctgacc tggtaagtag taaatgtact
     9601 cgccagccgc cttgaactca ggcgagagga ccttacggct gtctgccgtg gtcacaccaa
     9661 aggcaaccag ggtcggcgga actgtcaaat cctcaaaggt accagacatg gagtccttac
     9721 caccgataga cggcaaaccg agctgaatct gagcctcaat agagcccaga agtgctgcta
     9781 ctggctgacc gaaacgttcc gcctgcttgt ccatccgctg gaaatactcc tgataggaga
     9841 agcgagcctt ggaccagtta gcccctgttg ccaccaagcg agctgtcgct tcgatgactg
     9901 cataggctgc tccgtggtaa ggtgaccagt ctgccagata aggatgatag ccctgagcca
     9961 tgacagaagc cgtcgtcgtc acaccctgtt ggacaggtag tttctgtacc gaactttctg
    10021 tcggtgtcaa ttggtgacgc cccccgagag ggtgattaac ggttgaacga ccaacagatg
    10081 agtcgaaaat ggtctgcaag cctttctgac tagtatggtt gagatctgaa agaagatttt
    10141 tcaagtcctc ttgtagcgtt tcagcagatg ttgtacgtgt ttctggcaag ttgacagcac
    10201 tgtcaaccac cttagcatcc accaccacgc gcacaccgtt ggtgtcaagg aaggaacgtt
    10261 ccaaatcaac aattgtttga ccattccaag tcatgaccaa gtttggcttt tcagtgactt
    10321 tggctacaac aaccgcatgg atattttcct cacggcaggc tgcgataaag gtatctacgt
    10381 cttctggacg gacaactaca ctcatccgct cttgtgattc agaaatggca atttccgtac
    10441 cattcaaacc tgcatacttg agcgggacct tgtccaagtc tatttcaaga ccgtctgcca
    10501 gctcaccaat ggcaacgcag acaccgcctg caccgaagtc attggatttt ttaatgaggc
    10561 gagtgacgtc accatttcgg aacaaacgtt ggattttgcg ttcttcgata gcatttcctt
    10621 tttggacttc cgctccagcc gtttccacag actcaactgt ctgcacctta gatgaacctg
    10681 ttgctccacc gataccgtca cggcctgttt tgcctcctaa caagatgacc acatcgccag
    10741 caactggttt ttcacggacc acattttcct taggagcagc accgacaacg gcacctagtt
    10801 ccatgcgttt tgcgacaaat cctgggtgga aatactcacg cacgtaagtt gtcgccaaac
    10861 cgatttggtt accgtatgaa gaataaccat gtgccgctgt tttggagatg atttgctgcg
    10921 gcaatttccc tgagcgagta gccgttagag gttgggtaat atcgcccgca cctgaaattc
    10981 gcatggcctg atagacatag gaacgacctg acaaaggatc acgaatggct ccacctatac
    11041 aggttgcggc accaccaaaa ggctcgattt ctgttgggtg attatgggtt tcattcttga
    11101 acatgaggag ccacggctct ttcacgccgt ccacatccac ttcaatcttc accgagcagg
    11161 cattgatttc atctgacact tccatgtcat ccagacggcc atttgcccgc tcataacgac
    11221 caaaaatcgt cgccatatcc atgagcgtct gtggcttatc tgtccgacct aattctgtcc
    11281 gcatcgccag gtacttgtca taagttgcct gcaattgctt ttggaatttt gaagctgaaa
    11341 agtcaataga cttgagctcc gtttcaaaag tcgtatggcg gcagtggtca ctccagtaag
    11401 tatccaagac cttgagttct gtctcagttg gcactcgacc gattgatttg aaatagtctt
    11461 gaatgaagag taggtcttcc acttccatag ccaagccagc ctcacgcttg taagccgcaa
    11521 attcctctgc cccaaagtta tcaaaaaagt ccaagcttgg aatagtagta tccgaaactg
    11581 aaaactcctg agccaccaaa ggagcgtcca tatccttgaa tcgcgaatcc acagggttga
    11641 gcaaataatt cttgatggca gctaattctt cttcctgcac atcaccgttc aaaatataga
    11701 gctgaccagt attgacacgc acctcctgac gactgcccaa taagagaagg gcctcctgac
    11761 tgctggcagc ccgctggtca aactgcccag gaagtgcctc aatcgcaaaa taaacagccc
    11821 cttccaagcc cagctccgct tccgacaaga ccttatccgt cacctgctcg gtaaagatat
    11881 gcttaatagc ttgctccagc aagtcctcct ccaaatgaaa gacatcataa acctgcacca
    11941 gacgtacact cgtcaaactt gtcaactgca aattatgagt caactccttg cgaagagcct
    12001 ccgccttaat ctgaaaatcc gccttcttct caacaaaaat ccgcttcgcc attttttcca
    12061 atccttactt cacttcttgt aattttgcca atacgacctc gtaaacctcg gttaactccc
    12121 cgagcccccg acggaaaaca tccttgtcca gatggttgcc atccgcatcc cacaaacgac
    12181 aattatcagg agaaaattca tccgccaata atatctgacc agtagagtca atcccaaatt
    12241 ctagcttgaa atccaccaaa ttcagcccaa tctgagcaaa caagtccttc aagaacgcat
    12301 tgattcgtct tgtttcttcc ttgatatagg caatttcttc tgaactagct agattaagaa
    12361 aagcaatatg ttcttcgttg ataaaaggat cgtccaactc atctttttta tagtaaaatt
    12421 ccacgatagg agtaggtaag actatccctt cctccacacc gaagcgtttt gagaaagacc
    12481 cagctgtcac atttcgcaaa acaacctcaa gaggaataat ctccaccttc ttattcaact
    12541 gctccgtatc cgacaaacgc ttgataaaat gcgtcttgac tccagcttca ttcaactttt
    12601 caaaaatcaa agatgaaatc agattattga gtcgcccctt gccagtaatc tgttctttct
    12661 tgccaccatt aaaagccgtt gcctggtcct tgtaaactgc aacaatctgg tcgctgtcag
    12721 ccgtagcgta gatgtctttg gcttttcctg aatagagaag gtctgttttc attgaaatgt
    12781 tcgcctttca taaaatattc tagtcttttc gtttattcta tcacataaca ttcgcgtaaa
    12841 aaagtattta acggtatttt gtaaaaaaat aaagaaaaac gcccgtaaac tacgaacgtt
    12901 tctgtaattc ttcataaata aaatccacaa tatcagacaa ggtttcaaag cgctcaatag
    12961 ccgcatcagg aatatcgaca ccaaactcgt cttccaaagt caaaacgaat tccataattt
    13021 ccaccgaatc cgctgcaata ttatcagcca aagtcgactc aggttgaact ttaaaatcct
    13081 cacccttttc atcttgaatc aattcaacaa cccgctgata aatctgctct ctagtcatga
    13141 ctttcctcca ctactgaaaa tttggcaacc gatttttcga caataccagc ctccaagata
    13201 gaacgcgtct gcttaatagt atagaaaatc gactgggcat cgctggaacc gtgagccttg
    13261 ataactggag ctttcagacc aagcaagaca gcaccgcctg ctgttttata atccatagcc
    13321 cccaaggcct ttttcaaggt tggtttgacc atcaagcctc ccaatttagc acgcagaccg
    13381 ccatttttga tagagcccgt caactggcca acgatggatt ttgcagttcc ctcaatggtt
    13441 ttcagcacag cgtttcccgt gaaaccatcc gtcacgacca catccgccac gctgttgagc
    13501 aactcacgcg cctccacatt tccgataaag ttgatggact tgtcttccgc caagagttta
    13561 taagcctctt ggtgaactgg cgtgcccttg gtatcttccg taccgttgtt caaaagtccc
    13621 acacgaggtt gtttgacccc acgcacatgc tccgcgtaaa atgagccgag gataccatac
    13681 tgatagaggt gatgggctgt attttcagca tttgccccca aatccatcat atcaaatccc
    13741 ttaccgtcca tagtaggaag agtggacata agaccaggac ggtcgatgtt cttgatgcga
    13801 ccgacgacaa agacacctgc cgccaacaga gcacccgtat ttccagccga taagaccgca
    13861 tctgcttgac catccttgac agccttggtc gctaggacca tcgaagcctc ttttttccga
    13921 cgaatagcct tgacaggctc atcatctgaa ttgattttct ccgtcgtatg gacgatgctg
    13981 acacgctctg ttgctgtcaa atactgcttg attttagcct catcgccata aagttgaatt
    14041 tcaatgtctg gaaaggcagc caaggcttga ttgacacctt ctaccactgc ctgaggggcg
    14101 tggtccccac ccatagcatc tactgcaata cgtttcattc tgtttcctca ttttctgttc
    14161 ctggtttcat aatctgcccc caagaagaca aatcatctat aaatttcttg gatttcaagt
    14221 gaatccccac atattcctcg tacagctggt caataaaaag ccgtaatttt cgcttcatct
    14281 caggcttgat ggaaatggtt tctagctcat caaaggaaat agcctgaaat tgatcaagta
    14341 gatagggaac attggggtcc aaataagccc gtcgctcatc ttgttgatag tgttgcggac
    14401 acaagacacc gctatacttg taagaataat caaaaggcag accaacccga tgacaaaaag
    14461 cacactcgtg aaaattcaga ctgaccccaa aacgtcccaa gagctgaatt tcaaagatat
    14521 tggtcaagac ttcataatcc aaacccgact ccatcaagtc caaggtcttg accaaaaaag
    14581 aaaagagagc tggatcataa accttatcct gcaaggccgc atctgccaag gccaagatat
    14641 aggtcgcata gctgagtttg aaaatatcag cattgatcgc cttaaaaggc tggacttgat
    14701 gaaaatcctc aatataagac agcccatcat cattgatttt gacgataaaa tccgcatagg
    14761 tcaaaggctg gatagaagct accagcctga acttagaggc atgtttcacg aaaaacattc
    14821 gcttgccagc cttctctgta aaaatcttga ccagcttatc atcttctcga aaattccgat
    14881 tatataggac taatcccctg gtttcaattc gttccatttt cttctaaata ttccttcaaa
    14941 cgagccatag ctgtttgaat cttctccata cttgctgcgt aggaaattcg cacatagcct
    15001 tctccatact gaccgaaggc tgcgcctgga ataaaggcca ccgctttctt tctcgcaaag
    15061 tcttgcaaga agctaaagga atcttgatta taacccgcag ggatttttgc aaagatataa
    15121 aatgctccat caggcttgat aattttaaag cccaagtccg tcatcttctc gatgatgtaa
    15181 tccctacgct tgacgtactc cgcccgcatc ggaagagcat catccttacc gtttttcaag
    15241 gcctcaaccg caccatactg catagcagtt gacgccgctg tcacaagata ctggtggctc
    15301 ttgatgattt gagcgataat cggagcctga ctcataatca agccaatccg ccagcctgtc
    15361 atagcatggg acttggacaa gccctgaatc aaaatggtct gctctggcaa aaactctgca
    15421 attgaagtat ggggctgacc agtgtaggtc aactccgcat agacctcgtc tgataggaca
    15481 aagacaggat acttacgcaa gacatctgca aaggcccgaa tttgctcacg agagtaggtc
    15541 acacccgttg gattggcagg atagttgaga atgacagctt ttagcttatc accttgctca
    15601 ataatcgcct cttccaacat ctctggcgtc aagacgaaat gattggctgt cgtatcgatt
    15661 tcaacaacat cagctcctac catattaaca ataggctcat aaccaggata ggcaggggca
    15721 ggcagaagaa ctgtatcccc agcctccaaa atagcaacta aactcgctga cagagcttct
    15781 gtcgcaccga ttgtagagag gatttcattt tctggattgt agtgtaaatt atatttttca
    15841 gccacaaact cagctgctgc ctgacgcaac tccaaaagac cagccattcc agtataataa
    15901 ctcttgttag catcgatagc agccttagcc gcttctttaa catggtcagg cgttgtaaaa
    15961 tcaggctctc ccaatgttag tttcaaaatc ccgggaacat ccgaaataga ctgatcaaac
    16021 tgacgaatca tcgaaacctc aatccgattc aaattcttat taaaacgatt taataaatcc
    16081 attctgccac ctcaaaaaca tataaaacta ttataataca ttttgaaaat aaatgtaaaa
    16141 aagaagagtc atttgactct tctcatacct atttaacacg actcgcctca aacaaaggag
    16201 acaaaggacg tttttcatga atacgaataa tcgcttccgc taataattct gccgttgaaa
    16261 tatgttcgat tttatcgatt aagcgatctt ctgcaatttc aattgtatca agaacaacca
    16321 atttcttaat tgctgactta ctaatgttat ccatagcagg tcctgacaat actgggtgcg
    16381 tacatgaagc ataaacagct gttgcccctg catctgccaa agcatccgct gcatgacaga
    16441 tggtacccgc agtatcaatc atatcatcaa tcaagataca agttttatcc ttaatatcgc
    16501 caataatgtt catcacttct gatgtattca tcttatcaac actacggcgt ttatcaataa
    16561 tagcaatcgg tgtcttcaag aactgtgcta acttacgggc acgtgtcaca ccaccatggt
    16621 caggtgatac aacaacatag ccatcaccta ccataccacg acgctcaaaa taatccgcaa
    16681 tcaatggagc acccatcaaa tgatcaacag gaatatcgaa gaatccctga atctgcgcag
    16741 catgcaaatc aattgtcaac aaacgattga ctcccgctgt ttgtaacata ttggcaacta
    16801 attttgaagt gattggctca cgagcacgag ctttacgatc ctgacgtgca tagccatagt
    16861 aaggcattac aacgtttact gattcagcgg atgcacgttt aagagcatcg accataatca
    16921 aaatctccat taaattatca ttaactggtg agctagtgga ttgaagaata tacacgtgag
    16981 ttccacgaat ggattcctca atatttacct gaatctcacc atctgaaaat tgacgaacac
    17041 ttgattttcc tagaggaatt cctatttttt tcgacacctg ttcagctaac ttctgatttg
    17101 acgaaagagc gaacaatttt aagtcagtaa acgccatgac agcctcctat atatttctac
    17161 ctttactatt ttaacccttt ttccttcatt tttcaaacaa aaatagagcg caaatccaca
    17221 cgctctattt gaaaatttct taatatggag ggtaaatgta gtaaactgca ccttcagatg
    17281 tagttgtagg attaaaccaa ccacggtggt taccaatata acgacgaccc atgtagtttg
    17341 attcaacaac ttggatactt gttgaagatt gaacagccgt aacaaccgct acgtgcccat
    17401 aataaccacc tgtccaaaca gcaatcgcac ctacttgtgg agtagaacct gtactaaaac
    17461 cttcagcacg tgctgatgct aaccactgtt tagcatctcc ccagtaagga ccaacccatg
    17521 aaagttgaga tttaactccc caagtacact caccaattgg gtaagatgaa gcgtcataac
    17581 gcgcattatt tgctgccgct gaactacctg aacctgatga tatagacgtt gtaggtgtgc
    17641 ttaccgttgg tgtagattgt gatactgtcg caaccgtttc agtcactgta gtttctactg
    17701 gcgttgacac gactggtgct gatactgagg ctacttgttg ctgtgctaga gctgcctgtt
    17761 gtgcttgata ctccgcttga cgagctgccg cttgacgagc tgcttcttct gcagctgcct
    17821 tttgcgccaa caatgaattt ttctcatctt cagcagtagc tttctgcaca gccaaattta
    17881 acttagcagc ttccaattca gcctgacgca cttgcaatac ttgggcgtca tcttccaatt
    17941 tttggcgatt agctgccaaa gtagtgattg cctcttggtt tgccttttgt ttttcagcaa
    18001 ttgcttcctt atcagctttt tgttgttcca acatacggtt attagctgaa acaatctcac
    18061 gcattgcatt aacacgagaa acagcatcaa cgattgattt tgaatctaaa attgtattaa
    18121 tatagcttga agcagagcca tcaacttgag cactacgcgc ctgctccttt aaagcaccat
    18181 cacgtgacac aatatcagct gacaaacgct caatatctgc cgccaatgcc tgcgattctg
    18241 cttccaaacg agtattttct tctgttaatt tcgcctgttc actaacaatt gcatcaactt
    18301 gtccttgaat agcatcaact tgttgttgag cttcagcttg ttgtgctgtc aactcactaa
    18361 tctgttgatt ttttgctgca atctgactat ctacatcatt cgcactaatc acagctacat
    18421 aattagcatt agatagaacg actgtactta acataattgt agccaagatt tttttcttca
    18481 tatccgaaca taactcctct atactttctg actctctcat tttatcaaaa aaattgcgta
    18541 agtatattac gcaattatta catttctatg tcttgtttgt tattccaaat aaacgctcaa
    18601 atgacggttg tagtacgaaa aataagacca aattgaatag tagacttgga agtaatttat
    18661 taaaaacaaa gataaacaca gacaagtttg ttatatgaaa aatgcgagca aatgagtaac
    18721 taataaattc aaattgaaaa atagctacta gtaaaatcaa aatattaatt cctcgcttgc
    18781 tgacagcacc ttgaaagaag aaatagatgc aatataaaac taaaggaaga gttgtagtag
    18841 caataccaat cagattaaga taactaatat catataccaa acctagcaaa gtaaatatga
    18901 ataatgaaaa accaagagat acatagttag cataaaaaat agctaacata agtaccaaat
    18961 gacttgaaat agtaaataat ccgaccgacc aatttgttac caacgttgaa atctgtccat
    19021 caagtaataa aataaagaac aagatgggaa acatgaatat ttctatcatt ttattgcgca
    19081 tttgtttgac ctaccactaa aaccgaataa atatttgaaa aactagctgt cggctcaaca
    19141 tatacttctc tatttaaact gttactattt gatttaaccg ataaaacttt accaatttgg
    19201 atatttgccg aagtcgcacc agccaaatca ctcgttacaa cattgctccc cactgcaatt
    19261 tcatcagctg agttcaactg gtcaatgata aaactatttg tatctgcatc atagcccgat
    19321 aaaataccat aaatttcttt agaatcaaca gaaattttca caggcaactt cgtgaattca
    19381 tccgaattcg taaataaggt aacaaccgcc gaatctgaac tcaatgaact cacgattcca
    19441 actaatccac cattagcaac cacaagtgca ttagatgtca caccactagt ctcaccaata
    19501 ttaattgcaa tatgctccga ccacgctgaa ggagtcctca ccaaaactga tcctggaata
    19561 agttgttttt caggaaaatc agataccaca cctaaactgc tacgaagcga tgcattctct
    19621 tctttcaagc tagtattttc agcagccatc ccttcaaggc tcataatagc ttcctttaat
    19681 tgtttatttt cctcgtaagc gttcaccaaa tctgtcaaga catctttctg ctcagaaaaa
    19741 aatctagtag gtactgaaat aaccgattga attggcgtta caacaaccct aacgatatta
    19801 tttaaatatg gtacctgtaa ccccttagag aaagtcacaa acaaaagaga aaatgacagt
    19861 aataaaaaga tagaaacaac tactactaat tttgaaaatt tattcataat atatcctcac
    19921 caagatacaa taaaacgaga atatcaagcg ataatctcgt tcactacgga gaataaggga
    19981 ttcgaaccct tgcgccagtt acccgaccta acgatttagc aaaccgtcct cttcagcctc
    20041 ttgagtaatt ctccatcaat ataa
//
LOCUS       DASFQD010000033        19604 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.033, whole genome shotgun sequence.
ACCESSION   DASFQD010000033 DASFQD010000000
VERSION     DASFQD010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 19604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19604
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.033"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(183..1835)
                     /locus_tag="U1021_000899"
                     /pseudo
     CDS             complement(183..1835)
                     /locus_tag="U1021_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004183168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            1978..2907
                     /locus_tag="U1021_000900"
     CDS             1978..2907
                     /locus_tag="U1021_000900"
                     /inference="COORDINATES: protein motif:HMM:NF022440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2806 domain-containing protein"
                     /protein_id="HEM4711455.1"
                     /translation="MFDLSFLAQEPIVSIAGSSVTTAAINFLGYYYGERLQFNKMKQD
                     LIAERISNSNSTIPAVDIARCRNIKEIAQIADSLDDFSRTNPVEFSSEWFARFFDSAS
                     LVSDRDMQTIWAKILNGEAEEKSKYSFRFIESMRLLSKIEAEIFLKISKLAVQTPLGG
                     IHIISPENEEMLEIYRQYGIDEDELLLLEECGLINMGVEATHELELKRDLSGFFNDQY
                     FVNFSINPESKIKTFEFHSYSLTRFGSQLYELIEETTSADFILDLAQTLKSQLDGEII
                     VSVHNYILEEGIDGRISMSLDTDSVDISNKNEP"
     gene            complement(2926..3168)
                     /locus_tag="U1021_000901"
     CDS             complement(2926..3168)
                     /locus_tag="U1021_000901"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711456.1"
                     /translation="MQLLIKLTHIFIEKMDAIKTHYKLKTEAQEKYMDEVIKEFGELY
                     NRGCNGEIQLPDEPLVKFAKAKNIKQVEKLIVKSKN"
     gene            complement(3383..4165)
                     /locus_tag="U1021_000902"
     CDS             complement(3383..4165)
                     /locus_tag="U1021_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-relaxation family protein"
                     /protein_id="HEM4711457.1"
                     /translation="MRLTKRDYEVLSLLNRCRYATTKQLVELYFRENKPKTATRRANL
                     LAKKLRNLGLIHHLERRIGGVRAGSGSYIWHITHKGIKVLREIEPSVKLKLKNRYEPT
                     RNHLKHQLFVTQLFVELHRLHSERTLFLEDFSFEPRCWRSFATLFSHFTLKPDAFVRL
                     TIGEFEENYFFEADNATEHIGRVIAKCKQYIAYFNAGIEQRENEVFPLVVWIVPDEKR
                     KLGILNRIKEDLDAYWELFEVVTLDEFPEFIQGGRDGARTET"
     gene            complement(4152..6278)
                     /locus_tag="U1021_000903"
     CDS             complement(4152..6278)
                     /locus_tag="U1021_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system DNA-binding
                     domain-containing protein"
                     /protein_id="HEM4711458.1"
                     /translation="MKRPTHLSWQSMDWTRPFDFETICNFTTQLNGYSRRQPFIWEIR
                     LTQEKASHLIGADSIDLRFLKEMMTSHNPVRFEKTKRAKVTSAYSITLSKNHYALKTK
                     EVDNLVRSFLSQAGTLKRNEEIVLQLVVGKSSSPKPILKDLGNPDATLWQKLTGNIPP
                     LSSDSKALMREKLHHSQFQISLRLGIRTDTKAREIQLLKSILASLRILERAGAKFSAK
                     PTSCEKINHGHLPWHFQTILSSIELASLFLLPAGDAQYAGVSSLSPKTILPPIGFSQN
                     TKRLFGYSLEKFPRFIGIPAREGLSHTWLLGGTGSGKSTAMLNLILADARENRSAVVI
                     DPKATLASDVLERLPKERDKDVVILDPSQNGQSVSINPFDLVKFGVPAELVADMLLGV
                     FQEIFEGSWGIYTQDILSHSFHTLAKIDGLTLIDLPKLLTNKVFRHDLLKNVLDPFLL
                     DFWQGYDTLSDSARQTMISPVLNKFRSVLLRPALRAALGETSGKFSLKDIFDKPRLLL
                     VPLNKGLIGAENAKFIGAILLGCLYQLTLLRAKETIRKPVFIYIDEVADYLKLPVPLD
                     DALSMSRSLGVGYILANQFSKQLPKQLRESIYANCHNQIIFGLSMNEAKELAGLVPEL
                     SAEDFYKLPLFQVYTKVPIVKNTFKWLSAKTMPAPPAFRKKDEIYGESFKRYGSAFPE
                     QQSSQPASKPIYGIGRKKKEVSDETN"
     gene            complement(6447..7061)
                     /locus_tag="U1021_000904"
     CDS             complement(6447..7061)
                     /locus_tag="U1021_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine methyltransferase"
                     /protein_id="HEM4711459.1"
                     /translation="MTKYQDTINQHSPKKFKTILADPPWDVAQKGKLGAIRHYNLMTI
                     EEIKKMPIASLAEDDAHLWLWTYPAALEQSFEVVRAWGFEPKSIFTWVKPRLGLGNYL
                     RNCTEQVIFATRGKTPIKFKGQMNWGMFPVQDHSHKPEEVYSIIERCSDGDYLELFAR
                     RPVPSDKNWYVWGNEITSDIIIPNYPVPKYSKDVRDFRKVGQDE"
     gene            complement(7233..7472)
                     /locus_tag="U1021_000905"
     CDS             complement(7233..7472)
                     /locus_tag="U1021_000905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711460.1"
                     /translation="MDWNSIALVLLSALCILGLALITLVDEEEEPQESETFDFSTEEE
                     LALAEFLETRQAINEDFLVAQKKLLETLNHERRKF"
     gene            complement(7482..7748)
                     /locus_tag="U1021_000906"
     CDS             complement(7482..7748)
                     /locus_tag="U1021_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711461.1"
                     /translation="MPQLPQKYQTSEALPASAFSPQKMAIARNLSQDMAIVQANELLA
                     QDILNKVASLSELEAQILAHNPQAQQRTDFVIKAFTYVSARRFK"
     gene            7863..8921
                     /locus_tag="U1021_000907"
     CDS             7863..8921
                     /locus_tag="U1021_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004183156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711462.1"
                     /translation="MFTLQNLLHLLEKENRGWKNPTTMAKTILMALTNYNYPSDVASK
                     VFSGVNQGRNIFFDIKQLIDDEDFETYLASTEFRLCNQNFRNGNFDSTKMVEATHNLL
                     KESTNLNQDIYQGLLHSYCKNKDNRPYLFLSECFYYALACCHDKTVSYKIASISEVKK
                     PQTLPVWDGNLDDILSEESLPPKFWTTVEQMTAKEIAVFKTLASLAIIDEDEEYYLYA
                     PVTDEEIQLYKDFSIGDAEFLLMEEFGLINIGARIDNSVSVEADPAGFQNDNLVLMFT
                     TQYEPFDITYKSYTFTSVGSKLLDILAIETDDKFFQRLSKLFVKQHKNLLIEFYLVPI
                     EAMDGVESIEELEEFRLQ"
     gene            complement(8959..9327)
                     /locus_tag="U1021_000908"
     CDS             complement(8959..9327)
                     /locus_tag="U1021_000908"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711463.1"
                     /translation="MNDYKAKQELITLGEEIRQHTLWGLIPEIPKWDCTELGAYLPAI
                     SLPAFIDRLTVKNGVMSYAVTSFEQFTKHTEIYEINATLWEFIVKLQAVIDSQTEKEF
                     CQNLLEVLRIEVYFVKEWNN"
     gene            complement(9915..10217)
                     /locus_tag="U1021_000909"
     CDS             complement(9915..10217)
                     /locus_tag="U1021_000909"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711464.1"
                     /translation="MFYSESLSNFDLSSNVQSWEALDFNKVPGVQEKLDEIEADKIAS
                     ETEESTSAEESEDTQYIDEESTETKSNSVNGMVVVVGILIVLSAISFIAFSNKRNK"
     gene            complement(10267..11034)
                     /locus_tag="U1021_000910"
     CDS             complement(10267..11034)
                     /locus_tag="U1021_000910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711465.1"
                     /translation="MKKIQKILASIIAFYVLLLTLSCNTVFAEPTPLSLYEDNNIRFA
                     PLATGAENADNLYGIIGNRDRKYDDDVRAFLLKGVMGSTVKDLVIYLKPGESFTIDSP
                     TIPGRTINSVMHDSVRGNQFVTIDDKIPLPLTISYDDLVERGPFNNDEQIVSYSDRYI
                     LRGENDPRFEDPFIHLDGYYVLDYDGSKFNTDFALRVFDSFSWGYAGGAQSVPFKMYV
                     LEDEVLPLPESLYGQTLTGIAFVRSKYAYAVTDVYKK"
     gene            complement(11103..11273)
                     /locus_tag="U1021_000911"
     CDS             complement(11103..11273)
                     /locus_tag="U1021_000911"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711466.1"
                     /translation="MNAETLYVILVIGLIIGAYILKHILMKGIYHLEDSYKNKRNRAK
                     QNSTNSDKREKL"
     gene            complement(11283..11789)
                     /locus_tag="U1021_000912"
     CDS             complement(11283..11789)
                     /locus_tag="U1021_000912"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711467.1"
                     /translation="MEKIIIACIIGIFIYCIRNFFIGRRRDELLNQGAIESRDKLFLS
                     QEHCFFSSKISSVQEILSVLDMGSFKDNHIQLLNITDDGDAVFKITNNIIVKESYVLA
                     LLASEIRNEEKAYVLIITNTYNCDQSVIENPDNILLTQVERAIKNLIAMQRLNVTSSN
                     TIQQNKII"
     gene            complement(12000..12677)
                     /locus_tag="U1021_000913"
     CDS             complement(12000..12677)
                     /locus_tag="U1021_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEM4711468.1"
                     /translation="MKKIIKQYQEKGSVIIGYARVSSTDNRQELGLEVQKEALNFCDK
                     LYIEKETGGNQDRLQLQKALKLAKECAESDIETSFVVYKLDRLTRKMLHLSAIISELT
                     SYNIRLQSIHGQIETDSLTGKFFCLMLGYVAEWELQAISERTKDGLRKARERGGKLGN
                     KGISKSKEKQVIISYLEEETTVRKIANQLNISTATIYQVLKRNNITFRSQKAHNSLTK
                     EKQIDKL"
     gene            12846..13889
                     /locus_tag="U1021_000914"
     CDS             12846..13889
                     /locus_tag="U1021_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002266164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM4711469.1"
                     /translation="MKKKQVINLIRYFTEGNTSGFRTEAYEIAKAFDKTGDHQLAEYI
                     IAMLSENNTFIPQVSEEKFESLRKIQLTNFNPLPLPEAISSDVIGVVNAVRRNIGVDK
                     FLFEGAPGTGKTETVKQIARLLQRELYVVDFETIIDSKLGQTAKNIANLFKEINSFTH
                     PEQTLILFDEIDAIALNRLDNNDLREMGRATTAILKGMDTLRDGIVLIATTNLFSAFD
                     KALIRRFDAVINFNRYSQEDLLVIAESMMSTILNDSKHSGKNVRLFKKIVALCSPIPY
                     PGELKNTLKSAVAFSSLTDKFDYLRRLFSIFYKPVDNTTLKELKELGFTVREIEILTG
                     ISKSQTARELKED"
     gene            13895..16120
                     /locus_tag="U1021_000915"
     CDS             13895..16120
                     /locus_tag="U1021_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002266163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family peptidase"
                     /protein_id="HEM4711470.1"
                     /translation="MNDLLQLKGRFEQRSSSSKPGAPKLLSNKVVTINELVELRNQLE
                     SLRQYWETVTYFEGAFITIVYKDIVAKSRRAKELLKKNSRTFPNDLIVGARYIEGDKI
                     RHAITYYVDNNTIVETINKLELAIEILDEEFSGKITTEVVDAINAKLYPYGSSKLSKT
                     TFLQVIVDVSSIEEFTIPEANIDSGHRSIVSVFKTELQTSELLRRLGLDISIGRVIDD
                     STILLTPDEIALIMEKAPYLISMATVDLSQLDILDFDEANSSQILSIPDPTNEPIIGV
                     IDTLFDESVYFSKWVKYEDRVDSQIEKMSSDYEHGTGVSSIIVDGASINPDLDDNCGR
                     FRVKHFGVATSKQFSSFTIMKHIKEIVAENREIKVWNLSLGSALEIHKDFISPEAAIL
                     DKIQYDYDVIFVVAGTNITSDSNSPMLIGAPADSINSLIVNAVNKENIPASYSRIGKV
                     LSFFNKPDVSYYGGDGRDRIRVCFPLGEGFVKGTSFAAPWITRKIAYLIHKVGLSREV
                     AKALVIDSAISWSQNMTSSNVIGYGVVPQDINEVINAKDDEIKFILSGESLKYDTYSH
                     QLPVPIVNGQHPFVAKATLCYFPKCSRNQGVDYTNTELDIYFGRMLPNGKGIKTINEN
                     KQSDNVALHEEDAREQYRKWDNVKSIIEYVKPRGRAKKAYDNGLWGFSLKTKERLNTG
                     DGEGLKFGIVVTLKEINGINRIDDFINQCSMRGWLVQRIDVEELIQVHSIAEEEISFD
                     E"
     gene            16230..16670
                     /locus_tag="U1021_000916"
     CDS             16230..16670
                     /locus_tag="U1021_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003100713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711471.1"
                     /translation="MESFTIEFEADSEGYFTYECPFCEEQFKLLASEVQDEDFELEEL
                     FCPYCGLVDGADKFYSKEVLAYIQNLAEEWMINTINKSLGSIKSSKNFKVDFKKIKHN
                     TIAKPSEIDSVEEVFTCGVCEKHEKVLFSAGASKVFCAYCGGDL"
     gene            16667..17491
                     /locus_tag="U1021_000917"
                     /pseudo
     CDS             16667..17491
                     /locus_tag="U1021_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003100714.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            17580..19598
                     /gene="recG"
                     /locus_tag="U1021_000918"
     CDS             17580..19598
                     /gene="recG"
                     /locus_tag="U1021_000918"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEM4711472.1"
                     /translation="MKRLCDELSVLPGIGPKSAEKFLKINIQNINDLLTYYPFRYEDF
                     ESKSIYDLQDGEKAVVVGEVVSPANVQYYGYKRNRLRFSMKQGEVVLAVSFFNQPYLA
                     DKIVLGQDIAVWGKWDKAKASLTGMKILAQVSDELQPVYHVAQGISQVNLVKAIKTAI
                     DQGYLHLLEENLPSVLRERYRLMNRREAVFAMHFPTNLEEYRQALRRMKFEELFYFQL
                     QLQMLKANNRDISNGLKIAYDADRLAMQIRQLPFVLTDAQSGALAEILSDMKSYGHMN
                     RLLQGDVGSGKTVVAGLAMFAAVTAGMQAAIMVPTEILAEQHFESLRQLFPELSVALL
                     TGGMKAAERRTALEAISSGQVDIIVGTHALIQESVTYHKLGLVVTDEQHRFGVKQRRL
                     FREKGDNPDVLMMTATPIPRTLAITAFGDMDVSIINQLPAGRKPIITRWVKHQQLATV
                     LDWLEKELKSRAQVYFISPLIEESEALDLKNAVDLQSDLQAHFGEQVTVDLLHGKMKN
                     DEKDAIMQAFKERKTNILVSTTVIEVGVNVPNATVMVIMDADRFGLSQLHQLRGRVGR
                     GHKQSYAVLVANPKTESGKERMKIMTETIDGFILAEADLKMRGSGEIFGTRQSGLPEF
                     QVANIIEDYPILEEARRVASQIVSEENWQEDPNWSILLANLKDREELD"
BASE COUNT         5845 a         3387 c         4093 g         6279 t
ORIGIN      
        1 ggaggctgtt taggtctctt ttttgttttt tgaggtgaag gggctttaat ttggctcctt
       61 tttcttttct tgttactttg tctattcatt gtttgttgat ataatatcca cacctcaccg
      121 agcagtctgt tagttattat tttacgagcg gattttagtt cgctcgtttt ataattctcc
      181 gaaaatcggt aatgcagttc aatagtgact tgacggtttt tgctacgtcc agtcggttgg
      241 tgaatgacga tcttatcaat cagttcattc actagctgtg ttgtcaggtt ctcgagtttt
      301 gtgtgttggc gaatagttcg cataaacttg tcaatgtttt ccgcagattc ggtctgacta
      361 accagaacct cttgaaattc ctgaatttgt tggctgagtt cagcttgctc actctcgtaa
      421 ctgtccacca attttctaaa tctctcatcg ctaatctcgc ttaacagttg cttttcatag
      481 agcctttgga taattgtgtc taactccagc gaccgttttt tggctttatt taactgtttg
      541 cgtaagctat cctgcttttt actctctcga atgtcgaagc gagacttcag ttttgcaagc
      601 aattcttcct cattaaatcg aatagaagaa attagttgct gaaggtcgcc taacactaat
      661 tcttccagag tttctttgcg aaggtaatgt gaaccagaat aagtatcgcc agctcgacga
      721 taatggtaac acttgtagtg gtctaggttt gtgttgtctt tttgttgcgg acaaaaactg
      781 agtttatgac cattttcgca aaaaaccaaa cctgcaaaga gattttcgtg accaggcttg
      841 tttttccagt cgtatcggcg agtaactcgt ttatggttca tcatcttacg aaccgttttg
      901 aagtcttctt tcgaaatgat agcttcgtgt gtatttggaa aaatcagcca atcttctcga
      961 ggtttcatac gatgacctcg ttgtttgtag gaaatttttg cagtcttgag attgacagtc
     1021 gcccctgtat attcctcctt ttcgagcatc tggcaaatca tttgattttt ccagtgataa
     1081 gggtcacttt caagaactcg ataattcgaa atacctagct ttttcttgta attggcgggt
     1141 gttaggacct tgtcctttcg aaggtcattc gcaatagaag agattggttt tccagagaga
     1201 tactccttga aaattcgttt cacaattcga ctggcataat cgtcaatcag ccactccttg
     1261 ggattttctg gatttttgag ataaccgtac ggtgcaatcc agccaatttt ctcaccagtt
     1321 tttgccttag tgtgcttaga caacttgatt ttttcactac actgaagcga ataccagttg
     1381 ttaaacaagg aaactaaggg cgcaagataa gcatcttgac tattgcgttt attgctatcc
     1441 agattctcgt tcaaggagat gaagcggata ttttttgacg gaaatgtgat ttcggtcagt
     1501 tgcccagtca ggaggtagtc tcggctgaga cgacttaaat cttttacaac aaccgcttga
     1561 attttgccag tctccaccaa gttcatcatc ttctgaaaat ctggtcgttg ggcgttcgaa
     1621 cccgagaaac catcgtccac gaagaagaat ggatttggca agttttcacg catagccact
     1681 tgggtgagaa tctgtttctg gttggaaatt gagttactct cgccctcgtt ggcatcttca
     1741 gcggataaac ggcaatacag agcggttatc tggtctggta gattttccca attctgcgtt
     1801 ttgatgtctt caattgtcaa tgtgcgtttg ttcatagtgt gctcctttcg attcacctat
     1861 aacccactga catgatagct cgaagtgggc gtgaagtcca gtcaattaat gaattttagc
     1921 ggataaagtt tatattttat gatagaatga ggttagtaaa atctgtgagg tgatgatgtg
     1981 tttgacctta gttttttagc tcaagaacca atagtaagta ttgctggaag ctccgtaacg
     2041 accgccgcta tcaatttttt aggatattat tatggagagc gacttcagtt taataaaatg
     2101 aagcaggacc taatcgcaga aagaatcagc aattctaata gtactattcc tgccgttgat
     2161 attgctcgat gtagaaatat taaagaaatc gctcaaatag ctgatagcct agacgatttt
     2221 tctcgaacaa accctgttga attttcctct gagtggtttg ctcgtttctt tgattctgct
     2281 tcactggtct cagataggga tatgcagact atttgggcaa aaatacttaa tggtgaagct
     2341 gaagaaaaaa gtaagtattc ttttagattc attgaatcga tgagactatt gagcaaaatt
     2401 gaagcagaaa ttttcctcaa aatttccaag ctagctgttc aaacgccttt gggaggaatt
     2461 catattattt ctcccgaaaa tgaagaaatg ttggaaattt atagacaata tggtattgat
     2521 gaagatgaat tattgcttct tgaagaatgc ggtttaatta atatgggcgt agaggcaacg
     2581 catgagcttg aattaaagag agatttaagc ggatttttta atgatcaata ttttgtaaac
     2641 tttagtatca atcctgaaag caaaattaaa acatttgaat ttcatagtta ttctcttact
     2701 agatttggga gtcagttata tgaattgatt gaagagacta ctagcgctga ttttatttta
     2761 gatttagccc aaactcttaa atcacagcta gatggagaaa taattgtttc tgttcacaac
     2821 tatatattag aggaagggat tgacggcaga ataagcatgt cactagacac tgatagtgta
     2881 gatatatcta ataaaaatga gccctaaaca ggactcacaa accgttcaat tctttgattt
     2941 gacgattaat ttctcgacct gcttgatgtt tttagctttg gcgaatttca ccaaaggctc
     3001 atcaggaagt tggatttctc cattacatcc tctgttgtaa agttcaccaa attccttaat
     3061 gacctcatcc atatattttt cttgggcttc agtttttagt ttgtagtgag ttttgatagc
     3121 atccatcttt tcaataaaaa tatgggttaa ttttatcaat agttgcatcc gtttttcctc
     3181 ctaaaaataa gaaaaacgaa gcagaacagt tgtaaacagg cgttcgcaat gttctacttc
     3241 gtttaagtat atataaatta tagcacaaag cgaatgtttt gtcaattatt gctcatctct
     3301 caaaatcaag cgtctgattt tcttctcaag agattctttt cctgtaaact tcctcacaat
     3361 cacgaatgtc gctttgccaa ttttacgttt ctgttcttgc gccatctcgt cctccttgta
     3421 taaactcagg aaactcatct agtgtcacta cttcaaaaag ctcccagtaa gcatctaaat
     3481 cttccttgat tcgattcaaa atgcctaact tccgtttttc atctggcaca atccaaacta
     3541 ccaatggaaa gacctcgttc tcacgttgct cgatacccgc attgaagtag gcaatgtatt
     3601 gcttgcattt ggcaatcact ctaccaatat gttctgtggc gttgtcggct tcgaaaaaat
     3661 aattttcttc gaattcgcca atggttagtc gaacgaaagc gtcaggcttg agcgtaaaat
     3721 gtgagaacag ggtcgcaaag ctccgccaac atcttggttc gaaggaaaaa tcttccagaa
     3781 atagcgttct ttcactatga agtctatgaa gctccacaaa caattgcgtc acgaacagct
     3841 ggtgtttgag gtggttgcgt gttggctcat aacgattttt caatttgagt ttgacacttg
     3901 gctcaatctc acgcagaacc ttaatgcctt tgtgcgtgat atgccaaatg taggaaccac
     3961 tcccagctcg tacgccaccg attcggcgtt caagatgatg gataagtcca aggtttctta
     4021 atttcttggc gaggagattg gctcgccttg tggcggtttt aggtttattt tctctgaaat
     4081 aaagttccac caactgtttg gttgtggcgt agcgacaacg attaagtagg ctcagcacct
     4141 cataatctcg tttagttagt ctcatctgac acctcctttt tcttcctgcc gataccatag
     4201 attggttttg aggctggttg gcttgattgt tgttcaggaa atgctgaacc atatcgcttg
     4261 aagctctcgc cataaatctc atctttcttg cgaaaggcag gcggtgctgg cattgttttg
     4321 gcagatagcc atttgaatgt atttttcacg attggcactt tggtataaac ctgaaacaga
     4381 gggagtttgt agaaatcctc tgcggaaagt tcagggacaa gccccgccag ctccttagct
     4441 tcgttcatcg aaagcccaaa gataatctgg ttatggcagt tagcgtaaat agactctcga
     4501 agctgtttgg gtagttgctt tgaaaattga ttggctaaaa tataaccaac acctaaactt
     4561 cgagacatag agagtgcatc gtccagcgga actgggagtt tgagataatc tgcaacctca
     4621 tcaatgtaga tgaagacagg ctttcgaatg gtttccttgg ctcgaaggag tgttagctga
     4681 tataagcacc ccagcaggat tgctccgatg aatttggcat tttctgcacc gattaagcct
     4741 ttgtttagtg gaacaagcaa gagtcttggt ttatcaaaaa tgtccttcaa tgagaatttt
     4801 cctgaagttt ctcctagtgc cgctctcaag gctggacgaa gcaagacgct ccgaaatttg
     4861 ttaaggactg gagaaatcat ggtttggcgt gcggaatcgc tcaaggtgtc ataaccttgc
     4921 cagaaatcca gtaaaaatgg gtctaaaaca tttttcaaaa ggtcgtgccg aaagactttg
     4981 ttggttaaga gttttggtag gtcgataagt gttaaaccat ctatttttgc caaagtatga
     5041 aaactatgac tgagaatatc ctgtgtgtaa atcccccaag aaccttcgaa aatctcctga
     5101 aaaacaccga gaagcatatc cgcaaccaat tctgctggca cgccaaattt taccaagtca
     5161 aaaggattta tcgaaacgga ttgcccattt tgactagggt ctaaaatgac cacatcctta
     5221 tcccgttcct taggaagacg ctccagaaca tctgaagcta atgttgcctt ggggtcgatg
     5281 accacagcgg agcggttttc ccgagcatca gccaaaatca agttaagcat ggcagtggat
     5341 tttccactcc cagtgccacc caaaagccat gtatgcgata atccttctcg tgctggaata
     5401 ccgataaacc tcgggaattt ctccaaacta tatccaaaga gacgtttggt attttgtgaa
     5461 aagccgattg gtggtaaaat agttttgggc gacagtgatg atacgcctgc atattgagca
     5521 tcgccagctg gcagcaagaa gaggctggcg agctcaatgc ttgagagaat ggtctggaag
     5581 tgccacggca gatgtccgtg gtttattttt tcgcatgaag ttggcttggc agaaaactta
     5641 gccccagctc gctctaaaat ccgaagcgaa gccagaatgc tctttagaag ttgaatttct
     5701 ctagctttgg tgtctgttcg aatacctaat cgcaaactaa tttgaaattg actgtggtgg
     5761 agtttttctc gcatcagtgc cttagaatct gacgagagcg gtggaatatt acctgttagc
     5821 ttttgccaga gtgttgcgtc tggattgcca aggtctttga gaattggttt tggggaagaa
     5881 gatttaccga caactagctg gagcacgatt tcttcatttc tttttaaagt gccagcttgc
     5941 gacaggaagc tccgaacgag attgtctact tctttggttt ttaaggcgta gtgatttttt
     6001 gaaagagtaa tgctgtaggc tgaggtcact tttgcccgct tggttttctc aaaacgaaca
     6061 ggattgtgtg aggtcatcat ttctttcaaa aatcgcaagt cgattgagtc ggctccgata
     6121 agatggctgg ctttttcttg tgtcaaacga atttcccaga taaagggctg gcgacgagaa
     6181 taaccattga gttgtgttgt aaaattacag attgtttcga agtcaaaagg tctcgtccaa
     6241 tccatacttt gccacgacag atgagttggt cttttcatac tacctccaat cttgatgatg
     6301 tttgatgagt tttatggcaa cgtaaaagcc taaagatatt atagagccaa ccaccaactc
     6361 cagccaaata tcgactagaa gccgaacaga gtagttgacc agtattgcca aaagtcagaa
     6421 accgacaacg tagctcatta gctttttcat tcatcttgtc ctacctttcg aaaatctcgg
     6481 acatctttcg agtatttagg aactggatag tttggaatga tgatgtcgct cgtgatttca
     6541 ttgccccaaa cataccagtt tttgtctgaa ggcactggac ggcgagcgaa gagttccaga
     6601 taatctccat ctgaacagcg ttcgataatc gaataaactt cttcaggttt gtggctgtgg
     6661 tcttggactg gaaacattcc ccagttcatt tgtcctttga atttgatagg agttttgcct
     6721 cgggtcgcaa aaatcacttg ttcggtgcag tttcgaagat aattgccaag tccaagacgg
     6781 ggtttcaccc aagtgaagat ggattttggc tcgaagcccc aagctcgcac gacttcgaac
     6841 gattgttcga gggcggctgg atatgtccag agccagaggt gagcatcgtc ttcggcgagg
     6901 cttgcgatgg gcattttctt gatttcttca atcgtcatta agttataatg tcggattgcg
     6961 ccgagtttgc ctttttgtgc cacatcccaa ggcgggtcgg cgaggatggt cttgaacttc
     7021 ttaggcgaat gttggttaat tgtgtcttga tattttgtca ttttgaaaat cctttctgtc
     7081 tacgtcagac gctctgactt taccttaaaa tataattttt tcaaaccata agtaagataa
     7141 ggttatggag cgatgcgaaa tctaaaaaca gaggtcagac ggaacaaatc cgcccgactt
     7201 gttcgctgtt gtgagaaata caacagattg tcttaaaatt tcctcctttc gtgattgaga
     7261 gtttctaata gcttcttctg agctaccaga aagtcctcgt tgatagcttg acgagtttca
     7321 agaaattctg ctaaagcgag ttcttcttca gtggaaaaat cgaaagtttc agactcttgg
     7381 ggctcttcct cctcatccac taaggtaatg agagcaagcc ccagaataca tagagctgaa
     7441 agtaatacaa gggcaattga attccagtcc atacgagcct cctatttgaa acgacgagca
     7501 gaaacgtaag tgaatgcttt aatgacgaag tcagttcgtt gttgggcttg cggattgtga
     7561 gccagaatct gagcctcaag ttccgagagg ctggcgacct tgttcaagat gtcttgagcc
     7621 aaaagctcgt tggcttgaac aattgccata tcttgcgaca ggttgcgagc gattgccatt
     7681 ttttgtgggc taaaagcaga ggcgggcaat gcttcggatg tttggtattt ttgaggtagt
     7741 tgtggcatgc ggtgtctcct ttttgatata attaagttag ctaacttggt tacagtatat
     7801 caagcttgac agcctaaatt ttgccaaagt tttgcgattt tattgcgaaa aggagagtat
     7861 ctatgtttac acttcaaaat ttacttcact tattagaaaa agaaaaccgt ggatggaaaa
     7921 atccaaccac gatggcaaaa actatcttaa tggcactcac aaattacaac taccctagcg
     7981 atgttgcttc gaaagtcttt tcgggtgtta atcaggggag gaatatcttt tttgatatta
     8041 agcaacttat agacgatgag gattttgaaa cttatcttgc aagtactgaa tttagattgt
     8101 gtaatcaaaa cttccgtaac ggtaattttg acagcacgaa gatggtggaa gcaactcata
     8161 atctcctaaa agagtctaca aatctgaatc aggatatcta tcaaggattg cttcattcat
     8221 attgtaaaaa taaagataat cgaccgtatt tgtttctgtc ggagtgtttc tactatgctt
     8281 tagcttgttg tcacgacaag actgtgagtt ataaaatcgc aagtatttct gaagttaaaa
     8341 agccacaaac tttaccagtt tgggatggca atttagatga tatcttatct gaagaaagtc
     8401 ttccacctaa attttggaca actgtcgaac aaatgaccgc caaagaaatt gcggttttca
     8461 aaacgctggc aagtttggct attattgacg aagatgagga atattatctt tatgctccag
     8521 ttacagatga ggaaatccaa ctttacaaag actttagcat tggtgatgcg gagtttcttt
     8581 tgatggagga attcggactc atcaatattg gagcaagaat tgataattct gtttctgtcg
     8641 aagctgatcc tgctggattt caaaatgata atttggtttt gatgtttaca actcaatatg
     8701 agccttttga tattacatac aaaagctata catttacaag tgttggttcg aaattactgg
     8761 atattttagc gattgaaaca gatgataaat tcttccagcg attgtcgaaa ctgtttgtca
     8821 agcaacacaa aaatctactt atcgagtttt accttgtacc aattgaggct atggatgggg
     8881 tagaaagtat agaggagctt gaagaatttc gattacaata aaaatcccca acttgttacg
     8941 gctgaggaaa gttattattt aattattcca ttcttttaca aaataaactt ctatccgcaa
     9001 aacttcaagc aagttttgac aaaattcttt ttcggtttga ctatctataa ctgcttgaag
     9061 ttttactata aattcccaaa gtgtggcgtt aatttcgtag atttcggtat gtttggtaaa
     9121 ttgttcgaaa ctcgttacag cgtagctcat aacgccattt tttacggtta gacgatcaat
     9181 aaacgctggc aagcttatgg ctggcaaata ggctccgagc tcggtacaat cccactttgg
     9241 tatttctggt atcaagcccc aaagtgtatg ttggcggatt tcttcgccaa gtgttattaa
     9301 ttcttgtttg gctttgtagt cgttcataat ttccttatct gttatctatt attactggac
     9361 aatgataact ctctttatta aggaagtcca gtctatttcg atgtaatatt tacaatctgg
     9421 aagtgagctt cagaatcaga gtctaaagaa tatttcaacg cttaaacaga cgttatatgg
     9481 gcaggaaatg gcgatacgga gaattaatta tcaaaggtag ttattcagat attaatagac
     9541 attttttttg atacagtatg gaaatttaat attgaacttg cttgatttcg gggatggtaa
     9601 tggttagttt gccttcgtat tttagattca tctcgctcgt ccattattga agtttatagg
     9661 gaacttatat atggtagcaa agtgccttgt ccgccctaaa ataaccctga atagataata
     9721 agccgcctga cgaaacgccc ctgaaacggc gacgctccgc ctgctaaatc tcacttgaag
     9781 cgaatagcga taggaataag aaaactagaa aaatttctag gcaagtaggt atagtactag
     9841 gtttataaac ttcgtataga agttaaagca actatctcgg agaagcaaaa agtcccatat
     9901 atacgggaca ttagttattt attccttttg ttggaaaatg ctataaaaga aatagcagat
     9961 agtacaatta aaattccaac aaccactacc attccattga cagaatttga tttggtttcg
    10021 gttgactctt cgtcaatata ttgggtatct tcagattcct cagcagaagt tgactcctct
    10081 gtctcggaag caattttatc agcttctatt tcgtctaatt tttcttggac acctggaact
    10141 ttgttaaaat ctaaagcttc ccaagattgt acgttagatg ataaatcaaa gtttgataaa
    10201 ctttcagaat aaaacataaa tagtatggca tcatcatatt gattgtgaat atcgctatat
    10261 acaatgttat tttttgtata cgtccgtaac tgcatatgca tatttactac gcacaaaagc
    10321 gatacctgta agcgtttgtc catataaact ttctggtaac ggtaagacct cgtcctctag
    10381 aacatacatc ttgaatggaa cgctttgagc gccaccagca tacccccagc tgaaactgtc
    10441 aaatactctt aatgcgaaat ctgtattaaa ttttgagcca tcatagtcta atacatagta
    10501 accatctaaa tgaataaatg ggtcttcgaa acgagggtcg ttttctcctc tgagaatgta
    10561 tcggtcactg taggatacta tttgttcatc attattgaaa ggacctctct caaccagatc
    10621 atcataagag atagtaagtg ggaggggaat tttatcatct attgtgacaa actggtttcc
    10681 gcgaactgaa tcgtgcataa cggaatttat agttcttcca ggtatggtgg gagagtcgat
    10741 tgtgaaagac tccccaggtt tcagataaat tacgaggtct ttgacagtag aacccataac
    10801 ccctttaagc aagaatgcgc gaacgtcatc atcatacttg cggtctctgt ttccgattat
    10861 gccatagaga ttgtctgcat tctctgcacc tgtagctagc ggcgcaaatc gtatattatt
    10921 atcctcataa agtgatagtg gcgtaggttc tgcgaataca gtattgcaac ttagggtgag
    10981 aagtaataca tagaaagcaa tgatacttgc gagtattttt tgaatctttt tcataattac
    11041 ctttctaact ggcattgtgt tatttaaatt gaagaacttc aatatataat tttccaaaga
    11101 aattataatt tctcacgttt atcactgttc gtcgaatttt gtttagctcg gttgcgttta
    11161 tttttatatg agtcttctaa atgatatata cccttcatca aaatatgttt caaaatatag
    11221 gcaccaataa ttaatccgat aacgaggatt acataaagtg tttctgcatt cattttaatc
    11281 tcctaaataa ttttattttg ttgtatggta ttggatgacg tgacgttcaa ccgttgcatt
    11341 gctatcaagt ttttgatagc tcgctcgact tgagttaata agatattgtc aggattttct
    11401 ataacactct gatcacaatt gtatgtgttg gtgataataa gcacatatgc tttttcttca
    11461 tttctaattt cagacgccaa aagagcgaga acatagcttt ccttgacaat gatattattc
    11521 gttattttga aaacagcatc accgtcatct gttatgttta gaagttggat atggttatct
    11581 ttgaagctcc ccatatccaa tacggataat atctcttgaa cagagctaat tttgcttgaa
    11641 aagaagcaat gctcttgaga gagaaataat ttatctcgcg attcgatagc tccttgattg
    11701 agtagctcat ctcggcgtcg ccctatgaag aaattgcgga tacaatagat aaaaatacct
    11761 attatacaag caattattat cttttccata aaatccctcc attttttcat caaaatccct
    11821 gctacaatag ggtttgtgcg tgttttagtt aacggtcgtt aactaaaaca atgaaaaatc
    11881 aaaaaaatgc cgacttggta aggcttcaaa aaccccgtca aatcagcatt tctaatattt
    11941 tttattgata actttgattg ttttaacaaa cgaccgtctg ccaaaacaaa tgtattcgct
    12001 tacagtttat caatttgttt ttcctttgtc aaagaattat gtgctttttg actacgaaat
    12061 gtgatattat ttcgttttaa gacctgatag atggtggctg ttgaaatatt cagctggttg
    12121 gctattttgc gaacagttgt ttcttcttca agataactta taatgacttg cttttctttg
    12181 gattttgata tacctttatt gcccaacttg ccccctcgct ctctggcttt acgcagaccg
    12241 tctttggtgc gctctgaaat agcttgaagt tcccattccg ccacatagcc caacataagg
    12301 cagaagaact tgcctgttag cgaatccgtt tcgatttgtc catgtatgga ttgaaggcgg
    12361 atgttatagc tggttagctc cgagataata gcagacaggt ggagcatttt tctggttagg
    12421 cggtctagct tatagaccac aaagctggtt tctatgtcac tttcggcaca ttccttggca
    12481 agcttgagag ctttttgaag ttgtagtcgg tcttggttgc cgcctgtttc tttttctatg
    12541 tagagcttgt cgcaaaagtt cagggcttct ttttgaactt ccaagcccaa ctcttggcga
    12601 ttgtctgttg aactaacacg ggcatagcca atgatgacag aacctttttc ttgatattgc
    12661 ttgatgattt tcttcacatt ttcctcctta ctttactatt gtagcagggt ggttctattt
    12721 tagaagaaaa ttataattat gtaataattt ttttagattt cttgtatatt aaaaagatgt
    12781 ttttgtccct ataatattga ctttgtccca aaagattgtt attatatttt taggaggata
    12841 gacagatgaa aaaaaaacaa gtgataaacc ttattagata ttttacagag ggcaatactt
    12901 ctggatttag aactgaagct tatgagatag ctaaagcatt cgacaaaacg ggggatcacc
    12961 aattagcaga atatattata gcaatgcttt cagaaaacaa tacatttatt ccacaagtaa
    13021 gtgaagaaaa atttgaatca ctaagaaaaa ttcagttgac aaatttcaac cctttaccac
    13081 ttccagaagc catatcttca gatgttatag gtgtggtgaa cgccgtgcga cgaaatattg
    13141 gggtagataa atttctgttt gaaggtgcac ctgggacagg gaagacagaa acagtaaagc
    13201 agattgctcg cttgctgcaa agagagctat atgttgtaga ttttgaaact attattgata
    13261 gtaaactagg tcaaactgca aaaaatatag ctaatttatt taaagaaatc aatagtttta
    13321 cacaccctga acaaacgctt atcttgttcg atgaaattga tgctattgca ttaaacagat
    13381 tagataataa tgatcttagg gagatggggc gtgcaactac agcaatatta aaagggatgg
    13441 atacgttgcg agacggaatt gttttgattg caaccactaa tttatttagc gcttttgata
    13501 aagctctaat tcgaagattt gatgcagtta ttaactttaa tcgatatagt caagaagatt
    13561 tgttggtgat tgcggaatct atgatgtcaa ctattttgaa cgattcaaag cattctggta
    13621 aaaatgtgag acttttcaaa aagatagttg cgctttgttc ccctattcca tatcctggag
    13681 agcttaagaa taccttgaaa agtgcagtcg cattcagtag tctaacagat aagttcgact
    13741 atttacgacg attattttca attttttata aaccggttga caacacaacc ttaaaagagt
    13801 tgaaagaatt aggttttaca gtaagagaga ttgaaatttt gacaggaata tctaaaagcc
    13861 aaacagctag agaattaaag gaggattgat atagatgaat gatcttttac aattgaaagg
    13921 gcgttttgag caacgatcga gcagtagtaa gccaggagca cccaaactct tatccaataa
    13981 agttgtgacg attaatgagt tagtggagtt aagaaatcag ctagagtcac taagacaata
    14041 ttgggaaact gttacctatt ttgagggagc ttttataaca attgtttata aagacatagt
    14101 agctaagagt cggcgagcaa aagagctatt aaagaagaat agtcgtactt ttccaaatga
    14161 tctaattgtt ggtgctcgtt atatagaagg tgacaagata cgacatgcca ttacttacta
    14221 tgttgataac aatactattg tcgaaacaat aaataaatta gagttagcga tagaaattct
    14281 tgatgaagaa ttttccggca agattactac agaagtagtt gatgcaataa atgctaagtt
    14341 gtatccatat ggaagctcta agttatcgaa gacaacattc ttacaagtca ttgttgatgt
    14401 tagctctatc gaagagttca ctattccaga agcaaatatt gattcaggac accggtcaat
    14461 tgttagtgtg tttaaaacgg aactacaaac gtccgaactg cttcgtagat tgggcttaga
    14521 tatttctatc ggtagagtaa tagatgattc aaccatttta ttaactccgg atgagattgc
    14581 cttaataatg gaaaaggcac cttatctcat atctatggcg acagtggatt tatctcaatt
    14641 agatattctg gattttgatg aggcaaattc gagccaaata ttgtcaattc cagatcctac
    14701 caatgagcct atcatcggtg ttattgatac tttatttgat gagagcgttt atttttcgaa
    14761 atgggtaaaa tatgaagata gagttgatag tcaaattgaa aaaatgtcaa gtgattatga
    14821 gcatggaacg ggcgtatcat caataattgt tgatggggct tcaattaatc cggatcttga
    14881 tgataattgt ggtcgtttca gagtcaaaca ttttggtgtt gctacaagca aacaatttag
    14941 ttcctttact attatgaaac acataaaaga gatagttgct gaaaatagag aaattaaagt
    15001 ttggaattta tctcttggtt ctgcgcttga aattcataaa gattttatct ctcctgaggc
    15061 ggcaatattg gataaaattc aatatgatta tgatgttata tttgttgttg ctggaacaaa
    15121 tataacatca gattcgaata gcccgatgtt aattggagca ccagcagact caataaattc
    15181 acttatcgtt aacgcagtaa ataaggaaaa tatccctgct tcatattcca gaataggtaa
    15241 agttctatct ttctttaata aaccagatgt tagttattat ggtggagatg gtagagatag
    15301 aattagggtc tgtttccctc taggagaagg ttttgttaag ggaacttcat ttgcagcgcc
    15361 ttggattacg aggaaaattg catacctcat acataaagtg ggattaagca gggaagttgc
    15421 taaagcatta gtgattgatt cagctatatc ttggagccaa aatatgacat cttcaaatgt
    15481 tataggttac ggtgttgttc ctcaagatat taatgaagta ataaatgcaa aagatgatga
    15541 gataaaattc attttgtctg gggaatctct caagtatgat acatatagcc accagttacc
    15601 agttcctatt gtaaatgggc aacatccttt tgttgctaaa gcgacactct gttatttccc
    15661 aaaatgttcc agaaatcagg gagttgatta tactaacaca gaattagata tttatttcgg
    15721 aagaatgttg cctaatggta aaggtattaa aacaataaat gagaataagc aaagtgataa
    15781 tgtagcactc cacgaagaag atgcgcgaga acaatacaga aaatgggata atgtaaaatc
    15841 aattatagaa tatgttaaac cacgcggacg tgcgaagaaa gcttatgata atggcttatg
    15901 gggattcagc cttaagacta aggagagatt aaatactgga gacggagaag ggctaaaatt
    15961 tggaattgtt gtcactctta aagaaatcaa cggtataaac aggattgacg actttataaa
    16021 ccaatgctca atgcgtggct ggttagtgca aagaatcgat gtggaagaac tgattcaagt
    16081 tcacagtatt gctgaagaag aaattagttt tgatgagtaa cggtagctaa gagtgctcat
    16141 ttatatttgg taaatgttgt atcgtctttg ttttattctg tcagaaatta aacaaggaaa
    16201 ttaaattatt aagaaagatt ggataataaa tggaaagttt tacaattgag tttgaagccg
    16261 attcggaagg ctactttact tatgagtgcc ctttttgtga agaacagttt aagctattag
    16321 cttccgaagt gcaagatgaa gattttgaac tcgaagaact attttgtccg tattgcggat
    16381 tagttgatgg tgccgataag ttctattcaa aagaagtatt agcctatatt caaaatctcg
    16441 ctgaagagtg gatgattaac actataaata agagtttggg ttcaatcaaa agttcaaaga
    16501 attttaaggt tgatttcaag aagataaaac acaacaccat tgctaagcca tctgaaatag
    16561 actccgttga agaagtattt acttgtgggg tgtgcgaaaa acatgaaaaa gttttattta
    16621 gcgcaggtgc ttcaaaagtt ttctgtgctt actgtggagg tgatttatga tggaagaatt
    16681 acaaaaatat aggaaaatca gtctagagtt tagaagaaat tcatcaaata tgttgaacac
    16741 aaagtataat gatggcttgc tatatcttgt cagatttaaa gaatttattg ataagagcga
    16801 tattatacgt caaattttag aagacttatg gattgattta ccaaaagact ttaacgagaa
    16861 gctcgtatcg gaagacagta attcaggatg gagctatttt agtattccta tagaggaatc
    16921 taaacatcta aaactctgct atgattattt gaataaaatt atagaagatg atgttgattt
    16981 agcaggatta tcttgtgcat ttcttttaac ttcctctaaa aagtttaatg atacaatacg
    17041 agagtttttg aagaaagcct tcaagccgtt agttgattat ataaatgacc aattatctca
    17101 aaaaataatg gaattaacag gagtaaatca agtcatgtct caaattacac aaaatattga
    17161 aaataattac ggaacagctt cagcagtggg aactggaact atatcatcaa taaataatgt
    17221 ctctacgacg gatattgaaa ctttaaaaaa tctctgttca aatattttga aagacttaac
    17281 tggattaaat atgttgtctg aggatgataa ggaagtgatt attgatgata ttgaaacgat
    17341 tcaatcgcaa gtcgtttccg atagacctaa gaaaataaag cttaagaaag cgtggtcttc
    17401 aattcaaagt tttctcccta aaataccagc aggaatacct gtcacattac aactaataga
    17461 actgggtgag aaattatctg cattattttt taggactaca atctcttatt ccgtgatttt
    17521 tgtggttata ggatttgctg caatttggac tgctgtctgg actgtgctat aatagagaca
    17581 tgaaaagatt atgtgatgaa ttatcggttt tgcctgggat tggtccaaaa tcggctgaaa
    17641 aattcttaaa aattaacatt caaaatatta atgatttgct gacttactat ccattcagat
    17701 atgaagattt tgagagtaag tctatttatg atttgcagga tggggagaag gcagtggtag
    17761 ttggggaggt agtatctccg gctaatgtac agtattatgg ttacaaaaga aatagactcc
    17821 gtttttcaat gaaacaggga gaggttgtct tagcagtttc gttttttaat cagccttatt
    17881 tagcagataa gattgttttg gggcaggata ttgcagtttg gggaaagtgg gataaggcta
    17941 aggcaagttt gacaggaatg aaaattttgg ctcaagtatc agatgagctc caacctgtct
    18001 atcatgtggc gcaagggatt tcgcaagtaa atttggttaa ggctattaaa acagctattg
    18061 atcagggata tttgcattta ttagaggaga acttgccatc agttttacga gagcgctatc
    18121 ggttaatgaa tcgccgagag gcggtttttg cgatgcattt tccgacaaat ttagaagagt
    18181 atagacaagc tttgcgacgt atgaagtttg aggaattatt ttattttcaa ttacagttgc
    18241 aaatgctgaa agccaacaat cgtgatattt cgaatggttt gaagattgct tatgatgctg
    18301 atagattggc tatgcaaata agacaattgc cgtttgtctt aacagatgct cagtctgggg
    18361 ctttggctga aatactatca gatatgaagt cctatgggca catgaatcgt ttgttacaag
    18421 gggatgttgg ttcagggaag acagtagttg ctggattggc tatgtttgct gctgtgactg
    18481 cggggatgca ggctgcaatt atggtgccga cagaaatttt ggctgagcaa cactttgaga
    18541 gtttgcgcca gctttttcca gaactttctg ttgctctttt gacaggtgga atgaaagctg
    18601 cggagcgtcg tactgcttta gaggcgattt ctagtggtca ggtagacatc attgtaggaa
    18661 ctcacgctct tatccaggaa agtgtgacct accataagct tggtttggtt gtgacggatg
    18721 agcaacatcg ttttggtgtt aaacagcgcc gtctgtttcg tgagaagggt gataatccgg
    18781 atgtgcttat gatgactgct acacctattc ctcggacatt agccattaca gcttttggag
    18841 atatggatgt atcgattatt aatcagttac ctgctggtcg aaagccaatt atcactcgct
    18901 gggtcaaaca tcaacagctg gccacggttt tagattggtt ggagaaggag cttaagagta
    18961 gggctcaggt ttattttatc tctccgctga ttgaagaatc tgaggctcta gatttaaaga
    19021 atgctgtaga tctgcaatct gatttacagg cgcattttgg agagcaagtt acagtggatt
    19081 tgttacacgg taagatgaag aatgacgaga aagatgccat catgcaggct tttaaggagc
    19141 gaaaaacgaa tattttggtt tctaccactg ttattgaagt cggagtcaat gtgcccaatg
    19201 caacggtgat ggttattatg gatgctgatc gttttggttt aagccaatta catcagttga
    19261 gagggcgtgt aggacgtggt cataagcagt cttatgcagt gttagttgct aatcctaaaa
    19321 cagagtctgg taaggaacgc atgaaaatta tgacagagac gatagatggt tttattttgg
    19381 ctgaagctga cttaaaaatg cgtgggtctg gagaaatatt tgggacccgt caatcaggtt
    19441 tgccagaatt tcaggttgca aatattatcg aggactatcc aattttagag gaagcaagac
    19501 gagttgctag tcagattgtt agcgaggaaa attggcagga ggaccctaat tggtcgattt
    19561 tgcttgctaa tttgaaagat cgagaggaat tggactagtc atat
//
LOCUS       DASFQD010000034        19386 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.034, whole genome shotgun sequence.
ACCESSION   DASFQD010000034 DASFQD010000000
VERSION     DASFQD010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 19386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19386
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.034"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(176..3103)
                     /locus_tag="U1021_000919"
     CDS             complement(176..3103)
                     /locus_tag="U1021_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001813616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NPCBM/NEW2 domain-containing protein"
                     /protein_id="HEM4711473.1"
                     /translation="MRLKKVQIKLFSIVALMSIGIIQSQVNADEISLTEIEWNSATHG
                     DATSSKTVQINQPFTAGNDGRDNKISLKMDDGNIREFENGIGTVAANPSTISYDISSY
                     NATSFSTYVGIDRTARPTDHRYAKVDKVEILVDNEVKFTTLTDYPDGINYDTPAIPLQ
                     VDIPAGAQRLELKSYSGQYTWGDEVVFADPKLTIPEHSVTNPSETNEDPNSLPIREGS
                     VYLSDLEWRIATHGDATSSKIVQKNKPFSLGNNGNNQKISLKMSDDSIKEFDKGLGTI
                     AGSPSTIEYNIEGAEVSHFATFVGLDRSAGHSDNRYANIEKVEIEVDGEVIYSTLDEY
                     PNGINYNTKAVKIDIEIPEDSRTFRLKSYAGAQTWGDEVVFAGAYFVAKGAFKNPNDF
                     DPAPKRREISNTRPLLMMPLYANGNEYSRGNYAFWGGDTLAGKWENIDPELKPYTVIQ
                     IHPDDLPKRAGVAQQFYEHILNEAQNYINPQTGQNEPIPVILTVYTAGNQPHYTAAHW
                     IGIDWIDRMYERYSSLQGVFSTENYWVWAGDVESKAAEYLKLSAKHGGYFIWSEQNNG
                     ASIEKAMGAHGKTAFKEAVEKYWENFIFMYKNTPAHEGNDAPTASYMTGLWLADYAYQ
                     WGGLMDTWKWYETGKWKLFEQSSIGKTQGNRQWLTQPEAMLGAEAMNIYLNGGSVYNF
                     EHPAYTYGVRNEESPLFSNVIETFFKYIIKNPAPSREEVLANTKVVLSGNYSSKRDGH
                     FFVDVNTATHQSPLYTTGRYGTLPAVPASISVDVLRSKLPETIQVLSLSSGEMSSAAN
                     RRNFLNALYPEEYTGNIFGDEIDNRVFIYNYEYNSDNDQTGSFELNGKEFDVTLKSHS
                     FTIVEETDSGLHILLNNYRINKDSLWEGATDATSARALPQLSKPDAIDWVYNNYIHNT
                     ANSEQRQTVYVMKNVKVKPTIEILKSTDSDIQTPQIEFDEVTKTARITVVNNGFAEFL
                     IRY"
     gene            complement(3226..4119)
                     /locus_tag="U1021_000920"
     CDS             complement(3226..4119)
                     /locus_tag="U1021_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM4711474.1"
                     /translation="MKKQYAVGVDIGGTKVAVGLVDSNGTVDMSLRVPSQVDSAESLF
                     RCVCSAIDDLLSSQGLTIQKIKGIGIGLPGKVDVENGVAVFQNNIPWKNFPVVARFKE
                     VYGDLPIKIDNDVKVAAYAEYRLLDLDSSDMFGYITISTGIAATNIINNSILRGSGFA
                     GEIGFMPVQSFGRTSGLELACSGPAIELQGKQMYGVETISTKDVFENWRAGDRTAKAI
                     IENACTGIAQAIQNMVCFLDPKVIVLGGSVALHNLDFVEEFKEELKLYLHKEQEHILN
                     NILVSKIEGNNGIIGSAFLVQ"
     gene            complement(4129..5991)
                     /locus_tag="U1021_000921"
     CDS             complement(4129..5991)
                     /locus_tag="U1021_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001863627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-N-acetylgalactosaminidase"
                     /protein_id="HEM4711475.1"
                     /translation="MKIENNHLARYFKLVDGKFYTSHILNKDLEVVVPNQSTQEFRMV
                     LMNGRELTSEHFEAHVVEQTKETLLLSFNGEHIQLLLEYKSRVDVISKKMTVLNSQEA
                     INYIDVEWYEFANNEGIFYPQKQDDIKEMAGFSGYYVELGQPVYSKSLFFGMEFPMGE
                     NRVDGEVYFSRYYLGKAVSSAKEIWPVVIGAAPSTDKQGIQTAFYNYIEGIAQPSFFR
                     KQYNSWYDHMTNIDEDIIIKSFEEISHGFEDHGIQLDAYVVDDGWCDYESVWEFNHKF
                     PNGLTKVKALVNNLGASLGLWIGPRGGYNGTEVTMSDWLEAHPEFGSKNKLSNDVNIG
                     DFTYLNRMKAKMLDYQKQYDISYWKIDGWLLKPDVQDSSGDYAMHTMTPVYEFLIELL
                     KDLRAERGEQDCWLNLTSYVNPSPWFLQWVNSLWIQISQDVGFTENAGSDIQRMITYR
                     DCQYEEFLDKRDIQLPLWSLYNHEPIYASTAHTWYMDHQMYATVEEFEDYLMFIATRG
                     NAFWEFHYSYTMFDEERWKANARAVKWIEANYPTLKQSQKIGGSPSAFDIYGYHCVNG
                     DKEILSLRNPSGEAKVFTSENWNLYDYQTVKGHFEQVSETEIQLAPYEIVILSK"
     gene            complement(5994..7316)
                     /locus_tag="U1021_000922"
     CDS             complement(5994..7316)
                     /locus_tag="U1021_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003066419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HEM4711476.1"
                     /translation="MTKNSLQDIYKRTEWFRQDRFGMFIHWGLYSIPGKGEWIRSHQQ
                     LSIEDYQPYFEAFNPTKYNPREWARAAKAAGMKYMVLTAKHHDGFCLFDSAYTDYKAT
                     NTPIGKDLVAEFVQAVREEDLKVGLYFSLIDWYHKDYPKYGDMIHPMRENEAFKDEVI
                     DFDNYLTFLHNQVEEIVTKYGKLDILWFDYSYGNMFGEKWRATDLINLVRKHQPDVVV
                     DNRLETSGEGFGSIVTDDINIFSGDFVSPEQIVPHEGIRNAHGEPIPWELCLTMNNNW
                     AYNPTDHLYKSSKTLIRKLVECVSKNGNMILNVGPDALGLINLESKSILEDFGNWLGK
                     NGESIYGCGVSSLPKPEWGYYTQKGNTIYAHVFEQPIGPLALIGIDEKKVKRMSFLHD
                     GSEVKISKSWTTNAYEGICFAQYGDIPHFTYPLPDEVDSVIKIELESE"
     gene            complement(7313..8152)
                     /locus_tag="U1021_000923"
     CDS             complement(7313..8152)
                     /locus_tag="U1021_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001819555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM4711477.1"
                     /translation="MDAKLSGLSRTGKLIIYGYMAITCLISVFPILWIFLSSLKADPM
                     KNPGISLPTDLSFEGYIKVFTELHVLDYFWNSFKVVSISVLISIIMISMSSYVIARME
                     FRGKKLITAMLYSTLFIPATAMTFPVYRLVNVLGIYNTPAALIFVYSCSGIAMSFFII
                     KNYFAIIPKELEEAAEIDGATYAQTFWKVMLPIARPGILTAAILAFINNWNEYYWASM
                     LIINKDELTVPALLGQFTTSFNTNYNGLFSAIVVIILPPILLFAFASKYFIEALGGGA
                     VKG"
     gene            complement(8162..9082)
                     /locus_tag="U1021_000924"
     CDS             complement(8162..9082)
                     /locus_tag="U1021_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM4711478.1"
                     /translation="MAKKTMTLKNRKQQKQRFIFLFLLPTLICFFLFYFYSVVTIFAT
                     SFTKWDYTNLIKPEFLGFGNLFANYKYIFKEYPFFLEALKNSLTWAAIGVLVQVPLAL
                     SVAIALSKKLPGWKISRNLYIIPSIISSAAMGLIFLQIYNPNYGVVNQVIRFFNPDFT
                     GAILLTPGLNIIAMTCAYIFFAGTSTIMILGQIFAIPQEIHEAAILDNITGWRREWYI
                     TIPMIKETLKTVSIMAATSGFLLYNEVFFLTNGAAGTKSISFIIRELAVSSSRTQYAR
                     ANTIGVIQILGGMLIILCINLIFREGKARK"
     gene            complement(9141..10448)
                     /locus_tag="U1021_000925"
     CDS             complement(9141..10448)
                     /locus_tag="U1021_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001036440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEM4711479.1"
                     /translation="MTKKLLKCGSLCLLASVFLAACSASGSNSGSSEEKAASGGDEAV
                     LEFYHGYYHSEDEWPAAKVMRDLYDEFAKQHADGDVEFKATPVNGSLTDIMNNKVASG
                     EFPDMIDLAGNDVSLAAIEQSLVLDLKPYIDENGLEKNVGLNYTQNDVDGKIFTVHDQ
                     LLTLGLWYNADIFEKAGAKTPDQWAKWSDFTEAMAKVRSQEGIYAFGAGEPAIRLFNT
                     VLGSSEAGRKLLEGSLTSEGIDSKEFAEALKLVMTEVQANGSANAGGDANVYSTDFTD
                     GKSGVFFNGVWAAGGLSENPAYRPGLYAGNIAISSAGGGLTISSGLSEPEEKLALEFV
                     KYMTSDDVQKTIFEKVGANPTSQAIDTAEIAKGSDDATVKLLGEATSMANNADVIVPT
                     VVSAWGGDVRTAIINALTESAADGVDIDQKVKETQDILKALIG"
     gene            complement(10468..11115)
                     /locus_tag="U1021_000926"
     CDS             complement(10468..11115)
                     /locus_tag="U1021_000926"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001286141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HEM4711480.1"
                     /translation="MEKERKELIAYGKKLVTEGFTKGTGGNLSVFDRKQGLMAITPSG
                     IDFFEIQEEDIVIMDLEGNVVEGHRLPSSEWYMHLIQYQERDDIDAVIHAHTTYGTVL
                     AVLREPLPASHYMIAVAGKDVQVADYATYGTKELAENAAKAMKDRRAVFLANHGILAG
                     AQDLLNAYNIIEEVEYCAKIYCVAKSMGEPVILPDEEMELMAEKFKTYGQRQTSK"
     gene            complement(11135..12922)
                     /locus_tag="U1021_000927"
     CDS             complement(11135..12922)
                     /locus_tag="U1021_000927"
                     /EC_number="5.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose isomerase"
                     /protein_id="HEM4711481.1"
                     /translation="MTNYPKIGIRPTIDGRQGGVRESLEEKTMAMAVTAKELIESNLR
                     YADGTPVQCVVASRTIGGQGDAGIVYDEFSSQNIVATLSVTPSWCYGTETMDMDPHTI
                     KAIWGFNGTERPGAVYLAAAMSGYAQKGYPAFKIYGHDVQDLNDNSIPDDVAEKILLF
                     ARGAIAAGQMKGKSYVNIGASSMGIAGSQVTSSFFEDYLGMLVEFVDMTEILRRIQLE
                     IYDKDEYEKALAWIKENCKEGIDINAGKDFPEVITKSKVIPADKDWEFIAKQTLIIRD
                     ILFGNPKLAEIGWEEESRGRNAISGGFQGQRQWTDWLPNGDFAEAILASTFDWNGPRP
                     VTAFATENDTLNATAMLFGTLLTNKAPIFSDVRTYWSPEAVQRVTGKELTGRAKDGIL
                     HLINSGASALDGSAAARDENGQPTMKEFWNMTEEDVKACLEATDWCRANYEYFRGGGF
                     SSHFKTEGELPVTLIRVNLVKDVGPSLQIAEGYTCPLDDEVHRILDERTDRTWPTTWF
                     APNLGQPGFETVYDVMNHWGSNHGAFVHGHIGAEVITLASMLRIPVALHNVPRERIFR
                     PAIFDGVGTKDLEAADFKMCEVLGPLYSK"
     gene            complement(12924..14321)
                     /locus_tag="U1021_000928"
     CDS             complement(12924..14321)
                     /locus_tag="U1021_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulokinase"
                     /protein_id="HEM4711482.1"
                     /translation="MQSVLAIDLGATSGRAVAYSLVEEKIIANELVRFTNSPIKHRGE
                     LCWNVEHIFQNIELAIQTAKKSYEMQAVGIDTWGVDFAQVDSQGKLVTPPVCYRDSRT
                     KGILNKIAKYSSLDDLYYKTGNQLMEINTLFQLIAAKEKSPESYFRTHKILMVSDYLN
                     YRLSGELAIERTIASTTQMLNPLTKDWNHEVLAMFEVSDLLLPDLVDEGNVLGKTPDG
                     IKVINVCQHDTASAVAAIPNLEEKTLYISCGTWSLIGTELENPILTEKALTYNFTNEL
                     GHSRSTRFLKNCTGLWIVEELRRDYKEQGQEFGFDTIRQLVEAVDEDVPIIDTDDSRF
                     AEPGHMIEKIQTYLVEKGHSKPEEAGQLFKIVYHSLAHKYREVIGQLEEVVDYNFSYL
                     HLIGGGSKSTYFSQLVADVTGKTVVTGLYEATSLGNALIQFKALGYIKGIAEAKEIVT
                     NSVNFHYFYPEKEEV"
     gene            14484..15253
                     /locus_tag="U1021_000929"
                     /pseudo
     CDS             14484..15253
                     /locus_tag="U1021_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018167210.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
     gene            15436..15789
                     /gene="mobC"
                     /locus_tag="U1021_000930"
     CDS             15436..15789
                     /gene="mobC"
                     /locus_tag="U1021_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid mobilization relaxosome protein MobC"
                     /protein_id="HEM4711483.1"
                     /translation="MEKRTRPNQLKIRLSDKELAQVREKFGQSRSKSMRHFVLKCIME
                     TSIYEVDMQPFRELQHLLSKTSTNVNQIAKKVNNYSLVYKEDLKTIQNEIHHLSKELN
                     KLQNILYNRTNQGDI"
     gene            15791..17086
                     /locus_tag="U1021_000931"
     CDS             15791..17086
                     /locus_tag="U1021_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HEM4711484.1"
                     /translation="MAVTKIHPIKSTLHFAIDYILEKKKTDGQTLISTHMCFPTTAHL
                     QFLQTRKENKVNGTVLARHLIQSFLPGEVDQETAHKIGIELCQNILKDEYEFVLTTHV
                     DKGHIHNHIIFNNVNFETGKCYQSNKRTYHQIRSTSDRLCKKYKLSIIDEHYQTYRTK
                     YKTKGKSHYEWEQNQNGKGWKSYLQFLIDLNISRSNSWDDFLDRMKNSKCEIKFGKHI
                     AFKCKYASRFTRSKTIGSDYTEERLKERIEKNPPHQLIDTTKITDKKGLEFWARKHNL
                     KSMAKGLVELRNLGIQTKNDLELAIESIADKQILIQDEVKQIDKEMTELGKIMENLHV
                     IQKNKLIYHHYQKQPNNRQFLKEYQKEITAYKMAKQDLSHNYKSATPKDILSQLEQLQ
                     EKKNTLMTEYSQIKFQFNKLYQHKKNIDYYFETEQNRNI"
     gene            complement(17089..17586)
                     /locus_tag="U1021_000932"
     CDS             complement(17089..17586)
                     /locus_tag="U1021_000932"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711485.1"
                     /translation="MILLSLYGVIIVATICLFFFIAKTSVKLTCFAIDFVAVFIYTIY
                     LLHGPVSSKISSGNMTYFWDVLFGLASVVVYGFLMLLLTIYLPKVSKIINFVIVYFGV
                     GIGICLTTDFITSLLSIFNSNIEATYRLQFLNNDLANDVFYYILFYFVSIPVWKKRMD
                     YLAGE"
     gene            17750..18442
                     /locus_tag="U1021_000933"
     CDS             17750..18442
                     /locus_tag="U1021_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000490977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4711486.1"
                     /translation="MFSPKKLKEKRTELGFSQAEIARKLNISRMSFSAWESGKTKPNQ
                     KNLSILADIFDVEESFFESEYTIVQNYLLLTDENKLAAEDYVEQLLASQSIAENVVSL
                     FSYQVLSEVQLSAGPGESLFDEYETETVYSEDEYSGFDIATWISGNSMEPVYKDGEVA
                     LIRATGFDYDGAVYALQWNGSLYIKKLYREEDGFRMVSINPDVAVKFISFEDEIRIVG
                     KVVGHFMPVIGG"
     gene            18585..19386
                     /locus_tag="U1021_000934"
                     /pseudo
     CDS             18585..19386
                     /locus_tag="U1021_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006149971.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
BASE COUNT         5890 a         4157 c         3453 g         5886 t
ORIGIN      
        1 ttacatctac gtgactactt ggaattaaaa attaatttct actccatttc acatacggaa
       61 attgtgtacc tataaatttt ttcgataacg agtaaaggcg gtagttaaat accgcctcca
      121 catactttac ctatgaattt tcaaaattat cgaactatta ctcaatatga atcgtttaat
      181 atcgtattaa gaattcagca aaaccattat ttacaactgt gattcttgct gtcttagtca
      241 cttcatcaaa ttctatttgt ggtgtttgaa tatctgaatc cgttgacttt agaatctcaa
      301 ttgtgggttt tactttaaca tttttcatca cataaactgt ttggcgttgt tcagagttag
      361 cagtgttgtg aatataattg ttgtagaccc aatcaattgc atctggtttt gacaactgtg
      421 gtaacgccct agcagaagtt gcatctgttg caccttccca tagactatct ttgtttatcc
      481 gatagttatt gaggagaata tgcaaaccag aatctgtttc ttcgacaata gtgaatgagt
      541 gcgacttcaa tgtgacatca aactctttcc catttagttc gaatgaacct gtttgatcgt
      601 tgtcactatt atattcatag ttatagataa aaactctgtt atcaatttca tctccaaaaa
      661 tatttccagt atattcttct gggtaaagtg cattcaaaaa gtttcttcta ttggcagctg
      721 aactcatctc acctgatgaa aggcttaata cttggattgt ttcaggtaat tttgatcgca
      781 atacatcaac tgaaatacta gcaggaaccg ctggcaacgt accgtatcga ccagtagtat
      841 ataaaggact ttggtgcgtt gcagtattca catcaacaaa gaagtgtccg tcacgttttg
      901 atgaataatt gccactcaag actacttttg tattagctaa tacttcctct cttgatggtg
      961 ctggattttt gatgatgtac ttaaagaatg tttctataac atttgagaat agaggagatt
     1021 cttcatttct aacaccatag gtatacgcag ggtgttcaaa attgtaaact gatccaccat
     1081 ttaaataaat gttcatagct tcagcaccga gcatagcctc aggttgagtt aaccactgcc
     1141 tattcccttg agtcttacca atactgctct gttcaaataa cttccatttt ccagtttcgt
     1201 accatttcca ggtatccatc agaccacccc attgataagc ataatccgcc aaccacaatc
     1261 ctgtcatata acttgcagtt ggtgcatcat ttccttcatg ggctggtgta tttttgtaca
     1321 tgaaaataaa gttttcccaa tacttctcta ccgcttcttt aaaggctgtt tttccatgtg
     1381 ctcccatagc tttttcgatt gaagcaccgt tattttgttc agaccagata aagtaaccac
     1441 catgttttgc agataatttt aaatactcag ctgctttgct ttctacatct cctgcccaca
     1501 cccaatagtt ttcagttgag aatactcctt gtaaactaga gtatcgttca tacattctat
     1561 caatccagtc aataccgatc caatgagctg cagtatagtg aggttgatta cctgctgtat
     1621 aaaccgttag tattactgga attggctcat tttgacccgt ttgtggattg atgtaatttt
     1681 gtgcttcatt aagtatatgc tcataaaatt gttgagcaac tcctgctctc tttggtaagt
     1741 cgtcaggatg gatttgaata actgtatatg gttttaattc gggatcgata ttttcccact
     1801 taccggctaa agtatctcca ccccagaaag cataatttcc acggctgtat tcatttccat
     1861 tagcgtaaag tggcatcatt agaaggggac gtgtatttga aatttcacga cgtttaggag
     1921 ctgggtcaaa gtcatttgga tttttgaatg ctccttttgc aacaaaatac gcacctgcaa
     1981 atacaacttc atctccccaa gtttgagccc cagcataact tttcaatcta aaagtacgag
     2041 aatcttctgg gatttcaata tcgattttga ctgcctttgt attatagttt ataccatttg
     2101 gatattcatc taaagtggaa tagattacct ctccgtcaac ctcaatctca actttctcaa
     2161 tattggcata tctattatca gagtgaccag cacttctatc aagtccaaca aaagttgcaa
     2221 aatgactgac ttctgctcct tcaatgttat actcaattgt tgaaggcgaa ccagcaatcg
     2281 ttcctaaacc tttatcaaat tcttttatag aatcatctga catttttagg gatatttttt
     2341 gattattacc gttatttcca agtgagaatg gcttgttttt ttgaacaatt ttagaagatg
     2401 ttgcatctcc atgtgttgca attctccatt ctaaatcaga caagtatacc gaaccttctc
     2461 gaataggtaa tgaatttgga tcttcattag tttctgaagg gttagtaacc gaatgctctg
     2521 gtatggttag tttgggatcc gcaaatacaa cttcatcacc ccaagtatat tggcctgaat
     2581 aactttttaa ctctaatctt tgtgctcctg cgggaatatc aacctgtaaa ggtatggctg
     2641 gagtatcata atttatccca tctggataat cagttagagt tgtaaactta acttcattgt
     2701 caactaaaat ttcgacttta tctactttgg catacctatg atcggttggt cttgcagtcc
     2761 gatcaatccc tacgtaggtg ctgaaagatg tagcattgta gctagaaata tcatagctga
     2821 ttgtcgatgg attggctgct actgtaccta tcccattttc aaattctctg atattcccgt
     2881 catccatttt taaagatatt ttattatctc ttccatcatt tccagccgta aagggttggt
     2941 ttatctgaac agttttagat gatgttgcat cgccatgagt tgcagagttc cattcaatct
     3001 cagtgagtga aatttcatcc gcattcactt gagactgaat aattccaata gacatcaatg
     3061 caactattga aaacaattta atttgcactt tttttaatct catttgtaaa cctcaattga
     3121 aaaataattc ttgctcattt tcctagtcaa tcaataatac ggcctacgta tactgcttaa
     3181 ttctacttta ggaactatct atcttcatat ccttctcctt caatgttatt ggactaggaa
     3241 ggctgaacca atgattccgt tattaccttc aatttttgaa acaagtatat tattcagaat
     3301 atgttcctgt tctttatgca aatatagttt cagttcctct ttaaattctt caacaaaatc
     3361 aagattatgt aaggcaacac tacctccaag aacaatcact ttgggatcta ggaaacaaac
     3421 catattctga atggcctgtg caatacccgt gcatgcattc tcaatgatag ccttggctgt
     3481 cctgtcccct gctctccaat tttcaaatac atctttggta gatatggttt caacgccata
     3541 catctgttta ccttgaagct caatcgctgg tcctgaacaa gctaactcaa gcccactggt
     3601 tcgcccaaaa ctttgaacag gcataaaacc aatttctcct gcaaatccag aaccacgaag
     3661 gattgaatta ttaataatat tggtcgctgc tataccagtt gaaatggtga tgtagccaaa
     3721 catatcactt gaatctaagt ctagcaatcg atattctgca taggctgcta ccttaacatc
     3781 attgtcgatt ttaattggaa ggtcgccata gacttcctta aatctggcga cgactgggaa
     3841 gtttttccaa ggaatgttat tctgaaaaac agcaactcca ttttctacat caaccttacc
     3901 cggtaagcca atacctatac ctttgatttt ctgaattgtt aacccttggc ttgaaagcaa
     3961 gtcatcaatt gccgaacaaa cacatcggaa taggctttct gcactatcta cctgactagg
     4021 tacacgtaaa ctcatgtcta cagttccatt gctatcaacc agcccaacgg caacctttgt
     4081 tcccccaata tctacaccta ctgcgtattg ttttttcatg gttgtctcct attttgataa
     4141 aattacaatc tcatacggtg ctaattggat ctcagtctca gaaacttgtt caaaatgacc
     4201 ttttactgtc tggtaatcat ataggttcca attctcactt gtgaagactt ttgcttcacc
     4261 agatgggtta cggagtgaaa ggatttcttt atctccatta acacagtggt agccataaat
     4321 gtcaaaggct gatggactgc ccccaatttt ctgactttgt ttcaatgtcg gatagttagc
     4381 ctcaatccat ttgacagcac gcgcattggc tttccaacgc tcttcatcaa acatggtgta
     4441 agaataatgg aactcccaga aggcattccc ccgtgtcgca atgaacataa gataatcttc
     4501 aaattcctct actgtcgcat acatctgatg gtccatatac catgtatgag ctgtgctggc
     4561 atagattggt tcatgattat aaaggctcca aagaggcagt tgaatatccc ttttatctaa
     4621 aaattcctca tattgacaat cacgatacgt tatcatccgc tgaatatcac tacctgcatt
     4681 ctccgtaaaa ccaacatctt gagaaatctg gatccacaaa ctattgaccc attggaggaa
     4741 ccaaggactt ggattgacgt aggaggtcag gttgagccag caatcttgct cccctcgttc
     4801 agctctcaga tctttcaaaa gttcaatcaa aaattcataa acaggggtca tggtgtgcat
     4861 agcataatcc ccagatgaat cctgtacatc aggtttcaac aaccaaccat caattttcca
     4921 ataactaatg tcgtactgct tttggtaatc caacatcttg gctttcatcc gattgaggta
     4981 ggtaaaatca ccgatattga catcgtttga tagtttgttc ttactaccga actcgggatg
     5041 cgcttctagc caatcactca tggttacttc tgtcccgtta tagccacctc gggggcctat
     5101 ccaaagaccg agactagccc ccagattatt gaccaaagcc ttgaccttag tcaagccatt
     5161 cgggaactta tgattaaact cccaaacact ttcatagtcg caccagccat catcgacaac
     5221 ataggcatcc agctggatac catggtcctc aaagccatga gaaatttcct caaaactctt
     5281 gataataatg tcctcgtcaa tattggtcat gtggtcatac caagaattgt actgctttct
     5341 gaaaaaactt ggctgggcaa tgccttcaat ataattataa aaggctgtct ggattccttg
     5401 tttatctgtc gaaggtgccg cacctatgac aactggccag atttccttag cagacgaaac
     5461 tgctttccct aggtaatagc gtgaaaaata aacttcgcca tctaccctat tttctcccat
     5521 cggaaattcc atgccaaaga atagtgactt ggaatagact ggctgcccca gttccacata
     5581 ataacctgaa aaaccagcca tctccttgat gtcatcctgc ttctgaggat aaaaaatacc
     5641 ctcgttatta gcaaattcat accattccac atcgatataa ttgatggcct cttgagagtt
     5701 caggacggtc atttttttac tgatgacatc caccctagat ttatactcta acaggagctg
     5761 gatatgctct ccgttaaaac ttagaagaag agtttccttg gtttgctcca caacatgggc
     5821 ttcaaaatgc tctgatgtca attctctgcc attcatgaga accatacgaa attcttgcgt
     5881 tgactggttc ggcacgacca cttctaagtc cttattcaga atatgggaag tataaaactt
     5941 cccatccact aacttgaagt atcgagccag atgattgttt tcaatcttca tactcattca
     6001 ctttctaatt caatttttat cacactatct acctcatctg gtaggggata ggtaaaatgg
     6061 ggaatgtccc catactgggc aaaacaaata ccttcataag cattggtcgt ccagctctta
     6121 gaaatcttga cttcgctacc atcgtgcaag aagctcattc gcttcacttt cttctcatca
     6181 ataccaatca gtgcaagagg tccgattggt tgttcaaaga catgggcata gatagtattg
     6241 cctttttgcg tatagtagcc ccattcaggc ttaggcagtg agctgacacc acagccataa
     6301 atagattctc cgttcttacc caaccagttg ccaaaatctt ctaaaataga tttgctttct
     6361 aggttaatta aacccagagc atctggtccg acattcaaaa tcatattccc atttttgctg
     6421 acacattcaa ctaacttgcg aatcaacgtt ttggatgatt tgtagagatg atccgttgga
     6481 ttataagccc agttgttatt catggttaag cacagttccc aaggaatcgg ttctccatgt
     6541 gcattgcgaa tgccttcgtg cggaacaatt tgctcagggc taacaaaatc accagagaaa
     6601 atgttgatgt catccgtcac aatagagccg aatccctctc cagacgtttc cagacgattg
     6661 tcgacaacca catctggttg gtgctttcga accaagttta tcaaatcagt tgcccgccat
     6721 ttttctccga acatattgcc ataagaatag tcaaaccata gaatgtccaa tttgccatac
     6781 ttggtcacaa tttcttcgac ttggttgtgt aggaaggtca agtaattatc aaaatcaatc
     6841 acttcatcct tgaaggcttc attttcccgc atgggatgaa tcatgtctcc atactttgga
     6901 taatccttgt gataccagtc aatcaggcta aagtaaagac cgactttcaa gtcctcttct
     6961 cggacagctt ggacaaactc cgccaccaaa tccttgccaa tcggtgtgtt ggtagccttg
     7021 tagtcggtgt aggctgaatc aaacaagcaa aaaccatcat ggtgcttggc tgtcaagacc
     7081 atatacttca tgcctgctgc tttggctgcc ctagcccatt ccctcggatt atacttagtt
     7141 ggattaaagg cttcaaagta tggttggtag tcctctatag ataattgctg gtggctacga
     7201 atccactctc ccttgccagg aatggaataa agcccccagt ggataaacat accaaagcgg
     7261 tcctgtctaa accattccgt acgtttatag atgtcttgta aactgttttt tgtcatcctt
     7321 ttactgctcc tcctcccagt gcttcgatga agtatttact tgcaaaagca aatagtaaaa
     7381 tcggtggtaa gataatcacg acaatggctg aaaagagacc attatagttg gtattaaagc
     7441 tggttgtaaa ttgacccagc aaggctggaa ctgtcaattc atccttgttg ataatcaaca
     7501 tagaagccca atagtattcg ttccaattat tgataaaggc taagatagct gctgtcaaaa
     7561 tacccggtct agcaataggc aacatgacct tccagaaggt ctgagcgtag gtagccccat
     7621 caatttctgc tgcctcttct agctcttttg gaataatggc aaagtagttc ttgatgataa
     7681 agaaactcat ggcaatacca ctacaagagt agacaaaaat caaggctgcc ggtgtattat
     7741 aaatgcccag aacatttacc aaacgataaa cagggaaagt catggccgtt gcaggaatga
     7801 atagggttga ataaagcatt gctgtaatta atttcttgcc cctaaattcc atacgtgcaa
     7861 taacgtagga agacatagaa atcataatta tactaatcaa tacagatatt gaaaccacct
     7921 taaagctgtt ccaaaaataa tccaagacat ggagttctgt aaataccttg atatagcctt
     7981 caaaactcaa gtcagtcggt aagctgatac caggattttt cattggatca gccttaaggg
     8041 aagaaaggaa aatccataat attggaaaca ctgaaatcaa acaggtaatg gccatgtagc
     8101 cgtaaataat gagcttgcct gttcttgata gtccacttaa tttagcatcc atactcattt
     8161 ctcactttct agctttgcct tctctgaaaa tcaagttaat gcagagaata atcaacatac
     8221 cacccaatat ttgaatcaca ccaatggtat ttgccctagc atactgggtc cgagaacttg
     8281 atactgctaa ctcccgaatg atgaaactga tactcttggt tcctgcagca ccattggtca
     8341 agaagaacac ctcgttatac aatagaaaac cagaagtagc tgccataatg gagactgttt
     8401 tcaaggtttc tttgatcatg ggaatagtga tgtaccactc tcgtctccaa cccgtaatat
     8461 tatccaaaat cgctgcttca tgaatctctt gtggaatggc gaagatttgt cctagaatca
     8521 tgatggtgga tgttccagca aagaagatat aagcacaggt catagcgata atattcagac
     8581 caggcgtcaa gaggatggct cctgtgaaat ctggattgaa gaaacggatg acctggttga
     8641 ccacaccgta gttagggttg tagatttgta agaaaatcaa gcccatagcc gcacttgaga
     8701 tgatacttgg aatgatatag aggttccgtg aaatcttcca gcctggcaat ttttttgaca
     8761 gagctattgc cactgataat gctagaggaa cttgaaccaa gacaccgatc gctgcccagg
     8821 tcagggagtt tttcagtgct tccaagaaga aaggatattc cttaaaaata tacttgtagt
     8881 tggcaaatag attgccgaaa cctaaaaatt ctggtttaat caggttagta taatcccact
     8941 tggtaaagga agtagcgaaa atcgtcacca cagaatagaa ataaaacaag aagaaacaaa
     9001 tcaaggtcgg caaaaggaat aggaaaatga acctctgttt ctgctgtttc ctgtttttca
     9061 aggtcatggt tttctttgcc atactattac tcactttcta aacaaaaggg ctaaggatac
     9121 acttccctag ccctgtaatt ttagccgata agggctttca aaatatcttg agtttctttt
     9181 actttttggt caatgtccac accgtcagca gcactttctg tcaatgcgtt aatgatagct
     9241 gtacgaacat caccacccca agctgaaaca acggttggca caatgacgtc tgcattgttt
     9301 gccattgaag ttgcttcacc gagcaattta acagttgcgt cgtctgatcc tttagcaatt
     9361 tctgctgtat caattgcttg gctggttggg ttggcaccta ctttttcaaa gatagttttt
     9421 tgaacatcgt cgctagtcat gtatttaaca aactctaatg ccaatttttc ttcaggctca
     9481 gacaagccac ttgagatagt caaaccacca cctgctgagg aaattgcgat attaccagcg
     9541 tagagaccag gacgatacgc tggattttca gacaagccac ctgctgccca aacaccgttg
     9601 aagaacacgc ctgacttacc atctgtgaaa tcagttgagt aaacgttggc atcgccgcca
     9661 gcattggcag aaccgtttgc ctgtacttct gtcataacca gtttcagtgc ttctgcaaat
     9721 tcttttgagt caatgccttc agaagtaagt gaaccttcca acaatttacg accggcttca
     9781 gaagaaccta aaacagtgtt gaagagacga attgcaggtt ccccagcacc aaaggcatag
     9841 ataccttctt ggctacgaac ttttgccatt gcttctgtaa agtcgctcca tttagcccac
     9901 tgatctgggg ttttagcacc agctttttca aaaatatctg cattgtacca caaaccaagt
     9961 gtcaataatt ggtcatgaac agtaaagatt tttccatcaa catcgttttg ggtatagttc
    10021 agaccaacat tcttctcaag accattttcg tcaatgtatg gtttcaagtc caataccaaa
    10081 ctttgttcga tagctgcaag tgatacatca ttaccagcca ggtcaatcat atctgggaac
    10141 tcaccactgg caaccttgtt gttcataata tctgtcaagc taccattgac tggtgttgcc
    10201 ttaaattcaa cgtccccatc agcatgttgt ttggcaaatt cgtcatacaa gtcacgcata
    10261 acttttgcag ctggccactc atcttcactg tggtagtagc catgatagaa ttccagaaca
    10321 gcttcgtcac cacctgaagc tgctttctct tcagacgaac cactgttgct acctgacgca
    10381 ctacatgctg ctaagaatac agatgccaaa aggcaaagtg aaccacattt caataatttt
    10441 ttagtcatga caaattcctc ctattgtcta ttttgatgtt tgtctttgtc cgtatgtttt
    10501 aaatttttca gccatcaatt ccatttcttc gtctgggagg atgactggtt ctcccatgct
    10561 tttggcaaca cagtaaattt ttgcacagta ttcaacttct tcaataatgt tataggcatt
    10621 tagcaggtct tgggctccag ctaggatacc gtggttggca agaaagactg cacgtctgtc
    10681 tttcatagcc ttggctgcat tttcagccaa ttccttggtt ccataggtgg cataatccgc
    10741 aacctggaca tccttaccag ctaccgcaat catatagtga ctggctggaa gaggttctct
    10801 taggaccgct aagaccgttc cataggtcgt atgggcatgg ataacagcgt caatatcatc
    10861 tcgttcttgg tactgaatca ggtgcatata ccattcgctt gaggggaggc gatgcccttc
    10921 tacaacattt ccctccaggt ccataatgac aatgtcttct tcctggattt caaagaaatc
    10981 gattcctgaa ggtgtgatgg ccatcaaccc ctgctttcta tcaaagacac taagattgcc
    11041 acctgttccc tttgtaaatc cttctgtgac taacttttta ccgtatgcga tgagttcctt
    11101 tctttctttt tccatgaaca taggctgttc tcctttattt gctatatagc ggacctagaa
    11161 cctcacacat cttgaagtca gccgcttcta aatcttttgt tcccacacca tcaaagattg
    11221 ctggtcggaa aatccgttcc cttggaacat tatgtaatgc cacaggaata cggagcatac
    11281 ttgctagtgt aattacttct gcaccgatat gtccatgaac gaaggcaccg tggttggagc
    11341 cccagtgatt catgacatca tacaccgttt caaatcctgg ctgaccaaga tttggagcaa
    11401 accaggtagt tggccaagtg cggtccgtcc gctcatccag gatacgatgc acctcatcat
    11461 ctagcgggca ggtatagcct tctgcaatct gcaggcttgg acccacatcc ttaacgagat
    11521 tgacacgaat caaggttact ggcaattcac cctctgtctt aaagtgtgaa gagaaaccac
    11581 ctccgcggaa gtattcgtag ttggcacggc accagtctgt ggcttcgagg caggctttga
    11641 catcctcctc ggtcatattc caaaattctt tcatggtcgg ttgtccattt tcatctcgcg
    11701 cagctgcact gccgtcaaga gctgaagctc cagaattgat gagatggaga attccatcct
    11761 tggcacgacc ggtcaattcc ttacctgtta cacgttgcac cgcctctggg ctccaatagg
    11821 ttctgacatc agagaatatt ggagccttat tggttaggag ggttccaaat aacatggcgg
    11881 ttgcattcaa tgtatcgttt tcagtcgcaa aagcggtcac gggtctcgga ccattccagt
    11941 cgaaggttga ggccaaaatc gcttcagcga aatctccatt tggtagccag tcagtccatt
    12001 gtcgctgacc ctggaaacca cctgagatag catttctacc acgagactct tcttcccagc
    12061 cgatttctgc gagttttggg tttccaaaga gaatatctcg aataatcaag gtttgcttgg
    12121 caataaattc ccaatcctta tctgcaggga ttacttttga cttcgtaata acttctggga
    12181 aatcttttcc agcattaatg tcaatgcctt ctttacaatt ttcctttatc caagccaggg
    12241 ccttttcata ctcgtctttg tcatagattt ccagctggat acggcgaagg atttcggtca
    12301 tgtcgacaaa ctctaccaac attcccagat agtcttcaaa gaaggagctt gtaacttgtg
    12361 agccggcaat tcccattgaa gatgctccga tgttgacata ggattttccc ttcatctgac
    12421 cagctgcgat tgctcctctc gcaaagagaa ggattttttc agccacatca tctgggattg
    12481 aattatcatt caaatcctga acatcatgcc cgtaaatctt aaaggctgga tacccttttt
    12541 gagcatagcc actcatagcc gccgcaagat aaactgcacc aggccgctct gtgccattaa
    12601 agccccagat agccttgatg gtatggggat ccatgtccat ggtttcagta ccgtagcacc
    12661 aacttggtgt aactgagaga gtcgctacaa tattttgact tgaaaactca tcatagacaa
    12721 taccagcatc accctgacca ccgatggtac gactagcgac cacacactgg acaggcgttc
    12781 catcagcata gcgaagattg ctttcaatta attccttggc agtcactgcc atggccattg
    12841 tcttttcttc cagggattca cgaaccccac cttgtcgtcc atcgatagtc ggacgaatgc
    12901 caattttagg atagtttgtc atcctagacc tcctcctttt cgggataaaa gtagtgaaag
    12961 tttactgaat ttgtcacaat ttccttggct tcagctatac cctttatata accaagtgct
    13021 ttgaattgga taagagcatt gcctagagat gttgcctcat acaagcctgt cacgactgtc
    13081 tttcctgtca catcggcaac taactgagaa aagtaagttg acttcgaccc gccgccaatc
    13141 agatgaaggt agctaaaatt gtaatcaaca acttcttcca actgaccaat aacttctcta
    13201 tacttatgag ccaaactatg atagacaatc ttgaaaagtt gaccggcttc ctctggttta
    13261 gaatggcctt tttctactaa gtaggtctga attttttcta tcatgtgacc tggctcagca
    13321 aagcgactgt catctgtatc aataatcgga acgtcttcat ctactgcttc taccagctga
    13381 cgaatagtat caaaaccaaa ttcctgtccc tgttccttgt agtctcgtct cagctcctcg
    13441 acaatccaaa gtccggtgca attttttaaa aatcgtgtac tacgactgtg cccaagctca
    13501 ttggtaaaat tgtaggtcaa ggctttttct gtcaggattg gattctccaa ttctgttcca
    13561 atcaaggacc aagtcccaca agaaatatag agtgttttct cctccaggtt cggtatggcc
    13621 gctactgcac ttgccgtatc gtgctggcag acattgatga ccttaatacc gtctggtgtt
    13681 ttcccaagga cattaccttc gtccaccaag tcaggtaaga gcaagtctga cacttcaaac
    13741 atggcaagca cttcgtggtt ccaatccttt gtcaaaggat tgagcatctg tgtcgtcgaa
    13801 gcgatggttc gctcaatagc aagttctcct gacaatcgat agttgagata atcagaaacc
    13861 ataagtatct tgtgtgttct aaaataagat tctggtgatt tctctttagc cgcaatcagt
    13921 tggaacaatg tgtttatttc cattaactga tttcctgtct tataatatag gtcatcaagc
    13981 gatgaatact tggcaatttt gtttagtatt ccttttgttc gactatctct ataacaaacc
    14041 ggtggagtta ctaacttccc ttgactatca acctgagcaa aatcaactcc ccaagtatca
    14101 atcccaacgg cttgcatctc atatgatttt ttagctgtct gaatagctaa ttctatattt
    14161 tgaaaaatat gttctacatt ccaacagagt tcgccgcgat gctttatcgg ggaattcgta
    14221 aatcgtacta actcatttgc aataatcttc tcttcaacaa gtgaataagc cactgctctt
    14281 cctgatgtag cccccaggtc aatggcaagt accgattgca ttttcctcac ctccaacttg
    14341 ttaccgcttt catattttta ttttaagata ttaaatcttg attttcaata gatgaacgaa
    14401 aaaatgaatt ttgttcaaaa ttcactgggt atatatttca ctttagttca ttttatgtta
    14461 ttatatacat gaggaggctt gatatgagca gagacaaacg cttaaaagaa attacagata
    14521 ttcttcatac caaaaagaga attgatgtca aacagctaga aaaattaacg ttttcaagta
    14581 tatcaaccct tcggagggat ttaatttatt tagaagaaca gggattccta accagaaaac
    14641 gtggtgaagt cgttcttaat tcttttaata ccgttgaact agcccattca attagggaaa
    14701 ccgaaaatag agatgctaaa aaaaaattgc agaacttgcc aaggacttta tcggtcctgg
    14761 tatgtgcatt tacttggact ctagtacaac tgtttatgaa ctttgtccct atctagctaa
    14821 cattgataac ttaattattt ttacaaatgg tttaaatact gctcaaatgt tggcagacct
    14881 agcaaatcca acaatgaaaa tcttcatcac tggtggtgaa gtcaaacacc actccgcttc
    14941 tgttatcaac cataatagtg aaaataacct attaagtcat ttccgtattg atttagcgtt
    15001 ctgttcagcc cgtggtattg atgatgaatt tgtctatgaa gtttccttta gtcaagcatt
    15061 ggctaaaaag agtatcatcg atcaagcaag agatacgatt ttactcattg atagctcaaa
    15121 atttaatcat acaggtttct tcaaaatcaa taacttagaa cagtataaaa ccattatttc
    15181 tgataactat cctgataaaa cattgctgaa tgccgctgac caactcaatg tagagtggat
    15241 agcttatgat taatagtact tcttaacaaa acaatttagc ttaccgctct acaatataaa
    15301 actgttgtag caagcacagt aagtgggtac ccacttacga taaaattaac gaagcagacg
    15361 cctttggctc tgcttttttc gttatatttt acttgttagg gagaacccta agaccccgat
    15421 agaaaggaat agacaatgga aaaacgtacc cgaccaaacc aattaaaaat tcgactttca
    15481 gacaaggaac ttgctcaagt gcgagaaaaa tttggacaat ctcggtcaaa atcaatgcgg
    15541 cattttgttc tcaagtgtat catggaaaca tcgatctatg aagttgatat gcaaccattt
    15601 agagagttac aacatctcct ttccaagact tccactaatg tcaaccaaat tgccaagaag
    15661 gtcaataatt actcccttgt ttataaagag gaccttaaga caatccaaaa cgaaatacac
    15721 catttgagca aggaactcaa taaactacaa aacatactct acaacagaac aaatcagggg
    15781 gatatttgat atggctgtta ctaaaattca ccccattaaa tctactctgc attttgcaat
    15841 agactacatc cttgagaaga aaaaaacaga tggtcaaacg cttatttcga cacacatgtg
    15901 tttccctacc actgctcatt tacaattctt acaaactcga aaagagaaca aagtaaatgg
    15961 aacagtacta gctagacacc tgattcaatc cttcttacca ggtgaagttg accaagaaac
    16021 tgcccataaa attggaatag aactctgtca aaatatcttg aaagatgagt atgaatttgt
    16081 actaactact catgttgaca aaggccatat tcataatcat attattttta ataatgtcaa
    16141 ttttgaaact gggaaatgtt atcaaagcaa taaacgaacc tatcaccaaa tacggtctac
    16201 tagtgatcgc ttatgcaaaa aatacaaatt gtcaattatt gatgaacatt accaaactta
    16261 tcgcacgaaa tacaaaacca aaggaaaatc ccactatgag tgggaacaaa accaaaatgg
    16321 taaaggttgg aaatcatatt tacaatttct tatcgaccta aatatttcac gttcgaactc
    16381 atgggacgac tttcttgacc gtatgaagaa ttcaaagtgc gaaatcaaat ttggaaaaca
    16441 cattgccttc aaatgtaaat atgcttctag atttacacgc tctaaaacga ttggatccga
    16501 ctatactgag gagagattga aagaaagaat tgagaagaat ccgcctcatc aacttatcga
    16561 cacaactaaa attactgaca agaaaggttt agaattttgg gcgagaaaac acaacttaaa
    16621 atccatggca aaaggtctag ttgaactgag aaacctaggt attcaaacaa aaaatgattt
    16681 agaacttgcc atcgaatcta ttgctgataa acaaatcttg attcaagatg aagtaaagca
    16741 aattgataaa gaaatgacgg aacttggtaa gataatggaa aatctacacg tcatacagaa
    16801 gaataaactc atttatcatc attatcagaa acaaccaaat aatcgccagt tcttaaaaga
    16861 atatcagaaa gaaattactg cctacaaaat ggccaaacaa gacctttcac acaattataa
    16921 atcagccact ccaaaagaca tattatccca gttagaacaa ttgcaagaaa aaaagaatac
    16981 ccttatgaca gagtattctc aaataaaatt tcaattcaac aaactatatc agcacaagaa
    17041 aaatattgac tattactttg aaactgaaca aaatcgcaat atttaagatc attcaccagc
    17101 tagataatcc atccgcttct tccatacagg tatagaaaca aagtagaata gtatatagta
    17161 aaatacatca ttagcaaggt cattattcaa aaactgtaac cgataggttg cttcaatgtt
    17221 tgaattaaag attgataata gggaagttat gaaatcagtt gtcaaacaaa tacctatccc
    17281 tacaccaaaa tatactatca cgaaattgat aatcttactt acctttggca agtaaatggt
    17341 caacaacaac attagaaaac catagaccac gactgaagcc aatccaaaca aaacatccca
    17401 aaaataagtc atatttccgc tagaaatttt actagatact ggtccgtgta aaagataaat
    17461 tgtatagata aatactgcaa cgaaatcaat tgcaaaacaa gtaagcttaa cagaagtctt
    17521 tgcaatgaaa aagaaaagac aaattgttgc aacaataatt accccatata aactcaacaa
    17581 aatcataaca gtatcactcc tttcgcactt ctagtttact gcatttatca tattttgtcc
    17641 gctcattata tggaatggtc gaattatttt ttaaactaat acttgtcaaa attcaaaaaa
    17701 tattttatac tttgtgtaag tttataaact gacaaagaaa ggagtaatca tgttctctcc
    17761 aaaaaaatta aaagaaaaaa gaacagaatt aggtttctca caagctgaaa tagcacgaaa
    17821 actgaatatt agtcgcatgt cttttagtgc ctgggaaagc ggaaaaacca aaccaaatca
    17881 gaagaatctt tccatacttg ctgatatttt cgacgtagag gaatcttttt ttgaatctga
    17941 atatactatc gttcaaaact atcttctact cacagatgaa aataaattag ctgccgagga
    18001 ttatgttgaa caactgttag catctcaatc cattgctgaa aatgttgtgt cactgttctc
    18061 ctatcaggtg ctttctgaag ttcaattatc tgccggacca ggtgaaagtt tatttgatga
    18121 gtatgaaaca gaaactgttt attcagaaga tgaatattca ggttttgata tagcaacttg
    18181 gatttctggt aactcaatgg aacctgttta caaagacgga gaggttgcgt tgattcgagc
    18241 gactggattt gattatgatg gagcagtcta tgctttacag tggaatggct ctctctacat
    18301 caagaaactc tatcgtgagg aagatggttt ccgaatggtt tccatcaatc cagatgttgc
    18361 tgtgaaattc atctcatttg aagatgaaat cagaattgtt ggcaaggttg tagggcactt
    18421 catgccggtg attggaggtt agagatgtca aagtttgtta aagaaatgat ctacttcaag
    18481 gaagaccgca ttatcttatc tcttgaaaaa aaagaatacg acgtaacaga ccatctgaca
    18541 gaattggtcg ttgaactagc aaaattaaaa ataaggtgaa tagtatgggc tatatcgact
    18601 attcaaaaga accacgtagc gatattgctt ttgttgatat gaaatccttc tacgcatcca
    18661 tcgaatgtgt agagagagga cttcacccgc tccatacttc actttgtgtc atgagccgtg
    18721 cagacaactc ggcaggattg attctcgctt cttctcctat gtttaagaaa atcttcggaa
    18781 aagcaaatgt aggtcgttcc tacgacttgc cattcgatat caacactcgt aaattcgcta
    18841 tcagaatggg tggaaacagg gtcttgaggt aacaccgaag tataaatctt ttatagaaca
    18901 ttgggcaaag cgtacactca ttgttcctcc acgcatggac agatatattg agaagaatct
    18961 agagattcag catatctttc aagactatgc tgctccagat gacattctcc cctattcaat
    19021 cgatgaaggc tttattgacc ttactagctc actctcttac tttattactg ataagtcaat
    19081 gtcaaggaaa gataagttag ataatatttc ggctatggtt cagagagata tttatcgtaa
    19141 aacaggtatt atttcaactg ttggaatgag caattccaat cctcttctag ctaaactagc
    19201 tctagataat gaagctaaga aaactgctac aatgagagct aactggtcat acgaagatgt
    19261 agaaaccaag gtatgggcca ttccaaattt aacagacttt tgggggattg gtagtaaaac
    19321 tgagattcat ttacaaaaac ttggtattca ttcaatcaaa gaactggcta atttcaatcc
    19381 tgatat
//
LOCUS       DASFQD010000035        19220 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.035, whole genome shotgun sequence.
ACCESSION   DASFQD010000035 DASFQD010000000
VERSION     DASFQD010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 19220)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19220)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19220
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.035"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(72..1559)
                     /locus_tag="U1021_000935"
     CDS             complement(72..1559)
                     /locus_tag="U1021_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1846 domain-containing protein"
                     /protein_id="HEM4711487.1"
                     /translation="MKKIAFDSTKYLNLQRDHILERIAQFEGKLYMEFGGKMLEDFHA
                     ARVLPGYEPDNKIKLLQELKDQVEIVIAINASNIEHSKARGDLGISYDQEVFRLIDTF
                     NDIDIYVGSVVITQYRNQPAADAFRKQLEKHGIKSYLHYPIKGYPSDIDHIISPEGMG
                     KNDYIETSRNLVVVTAPGPGSGKLATCISQLYHDQLHGVTSGYAKFETFPVWNLPLHH
                     PVNLAYEAATADLDDLNMIDPFHLQTYGKTAVNYNRDIEVFPVLNRTFERILNKSPYA
                     SPTDMGVNMVGYSIVDEEAAIEASKQEIIRRYYQTLVDFKAERVSEQAVKKIELLMNE
                     VGVTPADRKVVIAAREKAELTTSPALAIQLPTGEIVTGKTSDLLKPTATVLLNAIKQI
                     ANIDDETLLIEPNYIRPIQELKADYLDKTNTRLDASEILNALAITAQNSPLAARAMKE
                     LGQLNGSEAHSTVILSDEDKSVLRKLGINLTFDPIYQHNKFYQKN"
     gene            1829..3097
                     /locus_tag="U1021_000936"
     CDS             1829..3097
                     /locus_tag="U1021_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM4711488.1"
                     /translation="MKKLIHNKLFLSSFVADLISNFGDTLYYLALMNYVLLLTDTKFA
                     LAMITASETLPILAGLFIGIWADKTKNKLDTILATLVVRVGLYAFVGFLMGFAPALWV
                     VAVVCVINFLSDLAGQYENGLYLPVSLRVVAAEDRETAMAFKMTVKSLLQIAFQASGA
                     ILIGFMSYQNLAFFNAGTFLVSLAIMATLRPAFAKLLKENPIQEAEQTETEAGIIKGM
                     RNSLKESYQAVQNIPVLKASIVTIASLNAIFTALSPLVILNMKEFSDFVIVNAGTTVA
                     LISIFFSVGSILGSSIGMALFKNVSLINLLKFSTLMPVLLFSGFFLHNIYVVLTVIFV
                     TAMTLGVFNPKMNALVLNELPEDKLATVGGGIDAFCQIGMVAGQALVAFMVTILSATS
                     ISLIFLLLSVVLVSYTILTGSKPAKSLVNT"
     gene            3108..4148
                     /locus_tag="U1021_000937"
     CDS             3108..4148
                     /locus_tag="U1021_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM4711489.1"
                     /translation="MKLDYRDYRSEIVEKFFIPLIVKEREEPFEADFSQKEKDILKDA
                     LDIRDEIEEKLADFRQEVNQVFVWGHIFNILHSLYFYILNDGQDPKTVEEACQLILKL
                     SQEEVEDAMRTMLASENDGHREQKLSLMELLEKTDKKPADKWYWSLAIRNPLETVQRS
                     VALLDKMLPNYQPYFEQARVEREAFARDFDIEQLYRDSKQLAMTGLDALGVETAQFFV
                     LSPWNYWFAYYGNEEFDYMKVALLASCRIDQIMLSNDELDLDDLTTALKVISDSTRYQ
                     VLVELTKPHAKSKDIAERLNITGAAVSFHTQKLINGDLLLFNAKDKNVKYSVNRDLLQ
                     QVIDKLKEDFDL"
     gene            complement(4170..5147)
                     /locus_tag="U1021_000938"
     CDS             complement(4170..5147)
                     /locus_tag="U1021_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711490.1"
                     /translation="MQNKTKPLNTSLLSLIQFIGAIPVIALHCRRLFEADQLHFIQKS
                     IFSRMVVPYFMVTASFFLRRNYPSLSKQYLTWSVLYLPFYLFYLNLQKIPLLYYPLAL
                     LVGLTYTGTSYQLWYMPAFLLGLVLVHYSLRKWGWRITVCLACLLYLLGSVETYSSYL
                     AESIFLTAFDSYKTFFFTSRNGLFYAPIFVLTGFYLADKLNHPIFQYRQKTKLLVSTV
                     ILICEATIIYLNQGYDKNFIFSLIPFTAYLVAWTLTTDLFRQKKFQFLKEYASYYYFI
                     HVIPVEVSFFFLETSSLTKIQQGWLVFLITIITCQLLSWLIIGYKKRTL"
     gene            5337..6023
                     /locus_tag="U1021_000939"
     CDS             5337..6023
                     /locus_tag="U1021_000939"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEM4711491.1"
                     /translation="MKDLHAKLLADFGIDFSDLNLLETAFTHTSYANEHRLLKISHNE
                     RLEFLGDAVLQLMISKYLYQKYPDSPEGEMSKLRSTFVREESLAGFSRACGFDQFLRL
                     GKGEEKSGGRNRDTILGDAFEAFLGALLLDKGEKTVEEFIHKVMIPRLEKGNFERVTD
                     YKTALQEILQVNGEIAISYQVIAESGPAHDKTFEVEVSADQRVIGRGRGRSKKLAEQA
                     AAKNAVEARG"
     gene            6026..9559
                     /gene="smc"
                     /locus_tag="U1021_000940"
     CDS             6026..9559
                     /gene="smc"
                     /locus_tag="U1021_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEM4711492.1"
                     /translation="MYLKSIEMQGFKSFADKTKVVFDRGVTAVVGPNGSGKSNITESL
                     RWALGESSAKSLRGGKMPDVIFSGTESRKALNYASVVVTLDNSTGFIANKNKEIKVER
                     HIYRSGDSEYLIDGQKVRLRDIHDLFMDTGLGRDSFSIISQGRVEAIFNSKPEERRAI
                     FEEAAGVLKYKTRKKETESKLAQAQGNLDRLDDIIYELDNQVKPLEKQAQTAKKFLEL
                     DGQRKELYLDVLVAQLSLGKEKLSKKEAELESVKTELTSYYKQRSELEQENQNLKEKR
                     HRLSEQLEREQAVLLDLTKLISDLERKIEVHKLESSQNESSRQEAQARLENLLTRREQ
                     LAEQIDQKQETLAQLDSSLSSLKDDIAAVDKEISYFSEDPDQVLDHLREQYVALMQEE
                     AEASNRLTKIQQDIANQISLSESKSEDLARLQTEKQTAQEVLDKSRKSLEEADYVLRQ
                     LLESYQTKKSELDQVQTAYQAEQGRLFDLLDQLKGKQARQSSLEAILKNHSNFYAGVK
                     AVLQAAPILGGIIGAVSEQLTFDTRYQTALEIALGGASQNVIVEDEATAKRAIAFLKE
                     KRQGRATFLPLTTIKPRQLSGQQVSLLESSEGFLGLASDLVTYQPNLDAIFQNLLGTI
                     AIFDTIDHANQAARATKFQVRMVTMDGAEIRPGGAFAGGSNRNNSTTFIKPELDALLG
                     EIAELSSQLQEQESLVAAKKTSLDQTREALETIKAEGEEARLNQQSARIHQEQAENRL
                     AQLSAQYDLQMSQVSPTILTELEEAAAKEEVNVQALNEKKLALDQQINQVRDNRDSIQ
                     ESLQKLQTQKGQLTLEQAELTSQLRFEQTDLRRLQEEKVVADKEISLLEDMIDQKLEA
                     LEDTSIEILEEQLQAASDKQNQTNQILIRLKFELEDIDGQFEDLEERLQQARTKNDDL
                     IRKQAKLEADCEQAGDKLRTLLGNLTEHFKLSFEAAQSQAKEVEYLAVAEQNLKDLER
                     AIRALGPVNLDAIEQYDEVNNRLTFLNEQRTDILSARDLLLDTIHEMDDEVKERFKVT
                     FEAIRESFKQTFKQMFGGGSADLILTEGDLLTAGVEISVQPPGKKIQSLNLMSGGEKA
                     LSALALLFSIIRVKTIPFVILDEVEAALDEANVKRFGDYLNRFDKESQFIVVTHRKGT
                     MAAADAMYGVTMQESGVSKIVSVKLKDVEKL"
     gene            9556..10365
                     /locus_tag="U1021_000941"
     CDS             9556..10365
                     /locus_tag="U1021_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4711493.1"
                     /translation="MINKIYASDMDGTFLREDHSFDKERFRRILNQFKEKGYLFVAAS
                     GRSMQSLKLVFEDFVDEIGFVAENGSIVEYQGQTIFMDDPISPEIYLPIIAGIDAGPF
                     GSSRSMVLSGLENFYLLKNAEPQFLETMTNYYAHFRLVDTFEEVREEIIKINAKFSPE
                     EMDDARRWLNDTFEGVTAMTTGFDNIDIIPNGSNKSVGLSHLCAHFGITGQAVVAFGD
                     NQNDLDMFDFAGLALATENAREDVKAKADSIIGHCNDGAVLAYLEEEVNGN"
     gene            10355..11182
                     /locus_tag="U1021_000942"
     CDS             10355..11182
                     /locus_tag="U1021_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016465979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM4711494.1"
                     /translation="MAIKLIALDLDGTLLTSDKRISEANKKALQAARERGVYVVLTTG
                     RPLQAIGTFLEELDLLGENQYSITFNGGLVQENTGRVLDKVGFTIEDVRTIRRVTNDL
                     DLPLDVLYGGDVYSLPSAHESLYLTCNPLLNKIVASDEEMPEDFVYNKAVSAVAADFL
                     DGQIPKIPAELHERFEIFKSRDILLEWSPKGVHKANGLAKLIGHLGIDRSEVMACGDE
                     GNDLSMIEWAGLGVAMANATDEIKSAAKVVLPKTNDEDGIAWAIEHYVLNEDYYGII"
     gene            11169..12443
                     /gene="ftsY"
                     /locus_tag="U1021_000943"
     CDS             11169..12443
                     /gene="ftsY"
                     /locus_tag="U1021_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEM4711495.1"
                     /translation="MGLFDRLFGQEKQEEQVALVEEVEREQSASSEDTVTTEVESTTQ
                     EMEEFQSEVAEPELTAEQEAQKQRTLDMMAQYYAAKEAAAARVKEAQEQGFDPAIQTK
                     VKEEPVEEVAPVEQESEQDKYQRTLKKTRTGFGARLNEFFANFRSVDEEFFEELEEML
                     ILSDVGVQVASTLTEELRYEAKLQNAKKTDELRRVIIEKLVDIYEKDGQFSEQINFQD
                     DLTVMLFVGVNGVGKTTSIGKLAYKYKQAGKKVMLVAADTFRAGAVAQLVEWGRRVDV
                     PVVTGPEKSDPASVVFDGVKRAVAEGVDILMIDTAGRLQNKDNLMAELEKIGRIIKRT
                     LPDAPHETLLALDASTGQNALSQAKEFAKITPLTGLVLTKLDGTAKGGVVLAIRQELD
                     IPVKLIGFGEKIDDIGEFKSEEFMRGLLEGLV"
     gene            complement(12489..13163)
                     /locus_tag="U1021_000944"
     CDS             complement(12489..13163)
                     /locus_tag="U1021_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HEM4711496.1"
                     /translation="MTELNTILTQLQVASHAGTLKRYEKIGETKPYYGVPMGAISGIA
                     KTYKNRLDLFAPLWQTGVLEAQYLAIQVAKNKPDQLPQADLENCLNEEVSVNVLDKLA
                     SIILSKRKDSKDWEEILLAKDEAIFNRLGWFLRAKYFAGKTATNQEIEETLDHIRKHL
                     QTADPLVQWTMNQCLVEIAVAYPDYLEQGLVIGQELAVYSDMKVPKGCTSPYAPDWIE
                     ALLRRK"
     gene            complement(13305..14792)
                     /locus_tag="U1021_000945"
     CDS             complement(13305..14792)
                     /locus_tag="U1021_000945"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000096131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEM4711497.1"
                     /translation="MSSHVLFTIFGASGDLAKRKLYPSLFRLYKAGHIKENFAVIGTA
                     RRPWTKDFFEQTVIESLGDLPDTPRQAHEFASHFYYQSHNVNDTEHYVALRKLQDDLC
                     EKYNTQHNKVFFLSMAPEFFGTIAKHLKSEQIVDGQGFERLIIEKPFGTSLATATKLN
                     DELAAAFNEDQIYRIDHYLGKEMVQNIFAVRFANIIFEHIWNRDYIDNVQITFAEAIG
                     VEDRGGYYDHSGALKDMVQNHALQVLSLLAMDKPASFKEEDVRAEKIKVFQHLRQPSD
                     EDLKRNFIRGQYAAGSIDGKDYVSYLDEPNIAEGSQTETFAGGVFFVDTDRFRDVPFF
                     FRTGKRLTEKGTRVTITFKHAEDIFGQPSEANVLTIFIQPTEGFMLSINGKEVGSHFA
                     LTPAKLNFRHNATALGNSPEAYEKLFFDVLNGDSTNFSHWEEVKASWSLIDRIVDLWA
                     SNQVPLHTYPAGTMGPEAAFDLLESYGCKWVWTPDVWYRERGLLK"
     gene            complement(14871..15686)
                     /locus_tag="U1021_000946"
     CDS             complement(14871..15686)
                     /locus_tag="U1021_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000617844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03943 family protein"
                     /protein_id="HEM4711498.1"
                     /translation="MIRFLILAGYFEMTMYLYISGKLDQYINLHYSYLAYLSMVLSFI
                     LAIVQLYVWVKEIRVHSHLKSKIAKLSSIGLLLIPLAIAWLFPTVSLDSTTVAAKGYH
                     FPLAAENDTNTQNQEGTTVQYLKPDTSIYFTKSAYQNQMREIADRYLAEETIVVTNEN
                     YMEVMEAIYDYPTEFSGKTIEMIGFVYNDPDNSQQFFLFRFGIIHCIADSGVYGLLST
                     GATTEFPNNTWVKARGTIKVSYHTSLKQNLPTLELQSMVQIEQPDSPYVYRVF"
     gene            complement(15683..16588)
                     /locus_tag="U1021_000947"
     CDS             complement(15683..16588)
                     /locus_tag="U1021_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEM4711499.1"
                     /translation="MFGLNQLPTSVLQAGAIFLSIMIEALPFVLIGAIISGFIDVFIT
                     PDKVRKLLPKNKFLAILFGTFIGFIFPSCECGIVPIVNRLLEKKVPSYTAVPFLVTAP
                     VINPIVLFATFTAFGNSLLFAFYRALGAIIVSLVLGIILGFFVKGPILKGSKFDHHQH
                     DYSDKTSWQKVGFALIHAIDEFFDTGRYLVFGCLFASLVQVYIPTAVLTTIGHSPLTA
                     ILLMMLLAFLLSLCSEADAFIGASLLSSFGFAPVMAFLVIGPMVDVKNLLMMKHYFKG
                     KFIAGFIITITLVILGYSLILGGVV"
     gene            complement(16590..16736)
                     /locus_tag="U1021_000948"
     CDS             complement(16590..16736)
                     /locus_tag="U1021_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711500.1"
                     /translation="MAITYKRQDDLEKMLEEFASFEKLEEIEYPDPKSKEHSEKNNLN
                     QDKK"
     gene            16859..18817
                     /gene="ligA"
                     /locus_tag="U1021_000949"
     CDS             16859..18817
                     /gene="ligA"
                     /locus_tag="U1021_000949"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011837172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEM4711501.1"
                     /translation="MKTRISELVSVLNQYAKEYYQLDQPSVSDAEYDTLYRELVELET
                     AYPELILPDSPTHRVGGKVLDGFEKYNHVYPLFSLQDAFSREELEAFDQRVRKEFPQA
                     TYICELKIDGLSISLTYEAGNLVVGATRGDGSVGENITENLKRVADIPLTLPEAVDIT
                     VRGECYMPKASFDRVNKQRQEAGEAEFANPRNAAAGTLRQLDTGVVAQRGLATFLYQE
                     ASPSEATSQSEVLRKLDALGFVTNHEYCLAESIDDTWDFIEKIAERRDDLPYEIDGVV
                     IKVNDLVIQEELGFTVKAPRWAVAYKFPAEEKEAEILSVDWTVGRTGVVTPTANLSPV
                     QLAGTTVSRATLHNVDYIAEKDIRIGDTVIVYKAGDIIPAVLKVVDKYRKEQEIMPIP
                     SHCPSCQSDLQHYEDEVALRCINPICPSQLMSKLEHFASRDAMNIAGLGSSIVEKLFG
                     AGLVHDVADIYKLTVDDLLTLEGFKEKSADKLYQAIQTSKSNSAERLLFGLGIRHVGS
                     KASKILVEKFGDLETLAFADQEAIASLEGLGQVIAKSLTTFFASEGAQQLLAELKEAK
                     VNLTYLGQVVDENAALSGMTVVLTGKLDRMKRNEAKAKLEALGANVAGSVSKKTNLVV
                     AGIDAGSKLTKAQELGIEIKDEAWLESL"
     gene            18828..>19220
                     /locus_tag="U1021_000950"
     CDS             18828..>19220
                     /locus_tag="U1021_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegS/Rv2252/BmrU family lipid kinase"
                     /protein_id="HEM4711502.1"
                     /translation="MEERKRARLIYNPTSGQEIMKKNVAEVLEILEGYGYETSAFQTT
                     AEKDSAKNEATRAALAGFDLIIAAGGDGTINEVVNGIAPLEKRPQMAIIPTGTTNDYA
                     RALKVPRGNPVEAAKVIGKQQTILMDIGL"
BASE COUNT         5604 a         3522 c         4674 g         5420 t
ORIGIN      
        1 aagcagggaa ttgaatcctt gcttttttac tgttcacaaa aagacttgtc ggagcaagtc
       61 tttttgtgtg cttagttttt ctgataaaac ttattgtgtt ggtagatagg gtcaaaggta
      121 agattgatgc ctaatttacg aaggacactc ttgtcttcat cggataggat aacagtcgaa
      181 tgagcttcgc taccatttaa ttggcctaat tctttcatgg cacgtgcagc aagagggcta
      241 ttttgtgcag tgatggcaag ggcgttaagg atttcgctgg cgtccaaacg tgtattggtc
      301 ttatccagat aatctgcctt caattcttga attggacgga tgtagtttgg ttcgatgaga
      361 agtgtttcat catcgatgtt agcaatttgc ttgatggcat tgagaaggac agttgcagtt
      421 ggcttgagga ggtcggatgt cttacctgtt acaatctctc cagttggcaa ctgaatagca
      481 agggcagggc tagttgtcag ctctgctttt tcgcgcgcag cgataacaac cttacgatct
      541 gctggtgtca caccgacttc attcatgagg agttcaatct ttttaactgc ttgctcgctc
      601 acccgctctg ccttgaaatc aaccaaggtc tggtagtagc ggcggatgat ttcttgcttg
      661 gatgcttcga tcgcagcctc ttcgtccacg atggaatagc ccaccatgtt aacgcccatg
      721 tctgtcggtg aggcgtatgg tgatttgttc aaaatacgtt caaaggtacg gttgaggaca
      781 gggaagacct cgatgtcacg gttgtagttg accgcagttt tgccgtaagt ttgcaggtgg
      841 aaggggtcga tcatgttgag gtcgtccagg tcggcagttg ctgcttcata ggccaagtta
      901 acgggatggt ggagtggtaa gttccacact gggaaggttt caaacttggc atagcctgat
      961 gttacgccat gcagttggtc gtggtaaagt tgggagatac aagtcgccaa tttacctgaa
     1021 ccaggtccag gtgcggtgac aacgacgaga ttgcgactag tttcaatgta gtcatttttg
     1081 cccatacctt ctggtgaaat gatgtggtcg atatcagaag gataaccctt gattgggtag
     1141 tggagatagg acttgatacc atgtttttcc aactgtttgc ggaaggcgtc tgcggctggt
     1201 tggttgcggt attgggtaat gacgacagaa ccaacataaa tatcaatatc attgaaggtg
     1261 tcaatcaaac ggaagacttc ttggtcataa gaaataccca agtcaccacg tgccttagaa
     1321 tgttcgatgt tgctggcatt gatggcgatg acgatttcta cttggtcttt taactcttgg
     1381 aggagtttga ttttgttatc tggttcatag ccaggtaaaa cacgggctgc gtggaaatct
     1441 tccaacattt ttccaccaaa ttccatatag agcttgcctt caaattgggc aatacgctct
     1501 aaaatatggt cacgttgcaa attcaaatat ttagttgaat caaatgcgat tttcttcatc
     1561 aaataagtcc tccaaatgtg taattttctc tgggaaaaac aaaaatagct ccctaaaact
     1621 agggagcctt ttctccgacc tctcaaaaga ggtgcccgaa caatactata acaaactgtg
     1681 ctaatcttgt caagaaaaag tcggatagaa aaaattaaac aagtgtttaa aaaatattta
     1741 atttttataa aattaaatat tgactttatt aaaataaagt gtaaaataat attaaacaaa
     1801 tatttaattg atgttcaagg agatgtttat gaaaaagttg attcacaata aattatttct
     1861 atctagcttt gtagcggact tgatttctaa ctttggagat acgctttact atctggcttt
     1921 gatgaactat gttttactct taacagatac caagtttgcc ctggctatga ttaccgcatc
     1981 tgaaaccttg ccgattttgg caggcctctt tatcgggatt tgggcagaca agaccaaaaa
     2041 caaattggat accattcttg caactctggt ggttcgtgtc ggtctctatg cttttgttgg
     2101 cttcttgatg ggatttgcac cagccctctg ggttgtggcg gtggtctgcg tcatcaactt
     2161 cctgtctgac cttgctggtc aatacgaaaa cggtctctat ttgccagtca gcttgcgggt
     2221 tgtggctgct gaagaccgtg aaacagctat ggcttttaag atgacggtga aaagtctttt
     2281 gcaaattgcc ttccaagcta gcggtgccat tctcatcggc tttatgtctt accagaatct
     2341 cgccttcttc aatgcaggga ccttcttggt cagccttgcc atcatggcaa ccctccgtcc
     2401 agcttttgcc aagttgttga aagagaatcc tatccaagaa gctgagcaaa cagaaacaga
     2461 agcaggtatt atcaagggca tgcgtaacag tctcaaagaa tcctaccaag ctgttcagaa
     2521 tattccagtt ctcaaagcgt caattgtgac cattgccagc ctgaatgcca tttttaccgc
     2581 actttcacca ttagttattc taaatatgaa ggagttctca gactttgtga ttgtcaatgc
     2641 aggaacaacc gttgctttga tttccatttt cttctcagta ggtagtatct tggggtcaag
     2701 tatcggtatg gctttgttca aaaatgtcag cttaatcaat ctcctcaagt tttctactct
     2761 tatgcctgtt ttacttttct cgggtttctt tctccacaat atttatgtgg tattgacggt
     2821 tatttttgtg acagctatga ctttgggtgt cttcaatccg aaaatgaatg ccttggtctt
     2881 aaatgaactg cctgaagata aattggcgac agtcggtgga gggattgatg ctttctgcca
     2941 gattggtatg gttgctggtc aagccttggt tgccttcatg gtgacaattc tctctgcgac
     3001 cagtatttcc ctcatcttcc tcttgctttc tgtggtgcta gtaagctata ctattcttac
     3061 aggatctaaa cctgcaaagt cattagtgaa tacttagaaa gaaaactatg aaattagatt
     3121 accgagatta tagaagcgaa attgtcgaaa aattctttat tcctttaatt gtcaaggagc
     3181 gtgaggagcc gtttgaggcg gatttttcac agaaagaaaa agacattctc aaagatgcct
     3241 tggacattcg tgatgagatt gaagaaaagt tggcagattt tcgtcaggaa gtcaatcaag
     3301 tctttgtctg gggacatatt tttaacattt tgcatagtct ttatttctat atcttgaatg
     3361 atgggcagga tccaaagaca gttgaggaag cttgtcaatt gattttaaag ctgtctcaag
     3421 aagaggtaga agatgccatg cggactatgc tagcgtctga aaatgacggt catcgtgagc
     3481 agaaactcag cctcatggaa ctcttggaaa agacagataa aaagccagca gataagtggt
     3541 actggtcatt ggctatccgc aatcccttgg aaacggttca gcggtctgtc gctctcttgg
     3601 ataagatgct tccaaactac cagccctatt ttgagcaagc aagagttgag cgggaagcct
     3661 ttgctaggga ttttgacatt gaacaactct acagagactc caaacagtta gctatgactg
     3721 gcttggatgc tttaggagtg gaaactgctc aattcttcgt cctcagtcct tggaattatt
     3781 ggtttgctta ttatggcaac gaagaatttg actatatgaa agttgctctt ttagcttcct
     3841 gtcgaattga tcagattatg ctgtcaaatg acgagctgga tctggatgat ttgacaacgg
     3901 ctcttaaagt catcagcgat agcacgcgct atcaggtctt ggtggagctg accaaacctc
     3961 atgctaagag caaggacatt gcagaacggc tcaatattac tggagccgct gtgtctttcc
     4021 atacccaaaa gttgattaac ggcgacctgc ttctctttaa tgccaaagac aagaatgtca
     4081 aatacagtgt caatcgcgac ctgctccaac aggtgattga taagttgaaa gaggattttg
     4141 atttgtaaaa aaaccttgta agttaggtct tacaaggttc tttttttgta gccaatgatt
     4201 aaccagctga gcagttggca agtgatgatg gtgataagga agactaacca cccttgctgt
     4261 attttggtca gggaactagt ttctaggaag aaaaagctga cttcgactgg gataacatgg
     4321 ataaaataat aatagctggc gtattctttt agaaattgga attttttctg gcggaagagg
     4381 tctgtggtta gggtccaggc gactagatag gctgtgaatg gaataaggct gaaaataaag
     4441 tttttatcat aaccttgatt gaggtagatg attgtagctt cgcagattaa aatgactgta
     4501 gaaactagca gtttggtttt ttgtcggtat tggaaaatgg ggtgattgag tttgtcggct
     4561 agataaaagc ctgtcaggac aaaaatcggt gcgtagaaga ggccattgcg gctggtgaaa
     4621 aagaaggttt tgtagctgtc aaatgcggtc aggaaaatcg attctgccag gtaggaggag
     4681 taggtttcaa ctgagcctag gagatagagg aggcaggcta gacatactgt gatgcgccag
     4741 ccccatttcc ttaaagaata gtgaacgagg acaagaccta gcaggaaggc gggcatgtac
     4801 cagagttggt agctggtgcc ggtgtaggtc agtccgacca ggagtgcgag gggatagtag
     4861 agtaggggga ttttttggag gtttaggtag aagaggtaga agggtaggta gaggacggac
     4921 caggtcaggt attgtttgga gaggctaggg tagtttcgtc ggaggaagaa gctggcggtg
     4981 accatgaagt aggggacgac catgcgacta aagatggatt tttgaatgaa gtggagctgg
     5041 tctgcttcaa ataacctgcg acaatggagg gcgataacgg ggatggctcc gatgaactgg
     5101 atgagggaga gtagtgatgt attgagtggt tttgtcttat tttgcatgct aacgtttttc
     5161 tttttttctt ccattttatc gaaatctgat gaatatgtaa atgtttgcaa aaagatgtgg
     5221 agaggtgctg gctgaaactt agttgacaag agaagtccag tggaaaatat ggtataatgt
     5281 taggacggag taaatgtaaa ccatctattt cgtttaagtt agaaaggagc atatagatga
     5341 aagatttaca tgcaaaatta ttggctgatt ttggaattga tttttcggat ttgaatttat
     5401 tagaaacggc ttttacccat acttcttatg ccaatgagca tcgccttcta aaaatttcac
     5461 ataatgagcg cttggaattt ttaggagacg ctgttctcca gttgatgatt tccaaatatc
     5521 tctatcaaaa atatcctgat agccccgaag gtgagatgtc caagttgcgt tcgacctttg
     5581 tacgtgagga gtctttagct ggtttttcac gtgcttgtgg ttttgatcag tttcttcgtc
     5641 ttggtaaggg ggaagagaag tctggagggc gaaatcgcga tactatttta ggagatgctt
     5701 tcgaggcgtt cttaggagct ctgctattgg acaaagggga aaagaccgtg gaggaattta
     5761 tccataaggt catgattcct cgtttagaaa aagggaattt tgagcgtgta acagactaca
     5821 agactgcttt gcaggaaatt ttgcaggtca atggtgagat tgctatttcg tatcaagtaa
     5881 tagctgagtc tggacctgcc catgataaga cctttgaagt ggaggtatct gctgatcagc
     5941 gtgtgattgg tcgtggtcgt ggtcgctcta agaaattagc tgaacaagcc gccgccaaaa
     6001 atgctgtgga ggctagagga taggtatgta tcttaaatcg attgaaatgc agggcttcaa
     6061 gtcctttgcg gataagacta aggtagtctt tgatcgtgga gtgactgctg ttgtagggcc
     6121 gaatggttct ggcaagtcca atattacaga aagtctacgt tgggccttgg gagagtcgtc
     6181 tgctaaaagc ctacgtggag gcaagatgcc agacgtcatc ttttcgggaa cagaaagccg
     6241 caaggctctt aactatgcct cggttgtcgt aaccttggat aatagcacag gttttattgc
     6301 taataagaat aaagaaatca aggtagaacg ccatatttat cggtctggag atagcgagta
     6361 tttgatagat ggtcagaagg ttcgattgcg ggatatccat gatcttttca tggatacagg
     6421 cttgggacgt gattctttct ctatcatttc acaagggcgg gttgaagcaa ttttcaattc
     6481 caagcctgag gaacgccgtg ctatttttga agaggcggca ggggtcttaa aatacaagac
     6541 gcgtaaaaaa gaaacagaaa gtaagctggc tcaggctcaa ggcaatttgg atcgcttgga
     6601 cgatattatc tacgaattgg ataatcaggt caaaccattg gagaaacagg cacaaactgc
     6661 taagaaattt ctagaattag atggtcaacg taaggaatta tacttagatg ttttggtggc
     6721 tcagttgtcg cttggtaagg aaaagttatc gaaaaaagaa gccgaactag agtctgtcaa
     6781 aacggaattg actagctact acaaacagcg ttctgagctg gagcaagaaa atcagaactt
     6841 gaaagagaag cgccaccgcc tttcagaaca attggagcgt gagcaggcag ttcttttgga
     6901 tttgaccaag ttaatcagtg atttggagcg aaaaattgag gtccataaac tggaatctag
     6961 tcaaaacgaa tcaagtcgtc aagaagcgca ggcgcgtttg gaaaacttgt tgactagacg
     7021 agagcagttg gcagaacaga ttgatcaaaa gcaagaaacg ctcgcgcaat tagatagttc
     7081 cttgtctagc ttgaaagacg atattgctgc ggtagacaaa gaaatttcct acttttcaga
     7141 agatcctgat caggttttag atcatctgcg tgaacagtat gttgctctga tgcaggaaga
     7201 ggcagaagct tcaaaccgtc tgaccaagat tcagcaggat attgccaatc aaatcagtct
     7261 ttctgagagt aaatctgaag acttggcacg attgcagacg gaaaaacaaa cagctcaaga
     7321 agtacttgat aagagtcgga aaagtttaga agaagctgat tacgtgttac gccagttgct
     7381 tgagagctat cagaccaaaa aatcggaatt ggatcaagtc cagactgctt atcaggctga
     7441 gcaaggtcgc ttgtttgatt tgctggacca gttgaaaggc aagcaggctc gccagtctag
     7501 tttagaagct attttaaaaa atcactccaa tttctacgcg ggagttaagg ctgtcttaca
     7561 ggcggcacca atcttaggag gaattattgg agcagtcagt gaacaattga cctttgatac
     7621 tcgttaccaa acggctttgg aaattgctct tggaggtgct agtcaaaacg tcatcgttga
     7681 agacgaagcg actgctaaac gagctatcgc atttttgaaa gaaaaacggc aaggacgggc
     7741 aaccttctta cctctaacaa ctatcaagcc acgtcagctt tctggacagc aagtctcttt
     7801 actagaatct tcagaaggat tcttggggct tgcaagtgat ttggtgactt atcagccaaa
     7861 tttagatgcg attttccaaa atttgctagg cactatcgcg atttttgata ccattgacca
     7921 tgccaatcag gcagcgcggg caaccaagtt tcaagtgcgt atggtgacca tggatggagc
     7981 ggaaatccgt cctggtggag cctttgctgg tggtagcaat cgaaataaca gcacgacctt
     8041 tatcaaacca gaactggatg ctcttttagg agaaatagca gagctgtcca gccagttaca
     8101 ggagcaagaa agcttggttg cggctaagaa aactagctta gaccagacca gagaagcctt
     8161 ggaaacgatt aaggcggagg gggaagaagc tagattgaac cagcagagcg caaggattca
     8221 tcaggaacag gcagaaaata gactggctca gctatcagcc cagtatgacc tgcaaatgag
     8281 tcaggttagt ccgaccattt tgactgagct agaagaggct gctgctaagg aagaagtaaa
     8341 tgtccaagcc ttgaatgaga aaaaactagc cttggatcaa caaatcaatc aagttcgtga
     8401 taatcgcgac agtattcaag aaagcttgca gaaactacag actcagaagg gtcaactaac
     8461 tttggaacag gctgaactga ctagccaact tcgttttgaa cagacagatt tgagacgttt
     8521 gcaagaagaa aaagtggttg cagataagga aatttctctt ttagaggata tgattgacca
     8581 gaagcttgaa gctcttgaag atactagtat tgagattctt gaagaacaat tgcaggccgc
     8641 atctgataag caaaaccaga caaatcagat tctaattcgc ttaaagtttg aattggaaga
     8701 tattgatggg cagtttgaag acttggaaga aagattgcaa caagctcgga ctaagaatga
     8761 tgatttgatt cgtaagcagg ctaagctaga ggcggattgt gagcaagcgg gcgataaatt
     8821 acggactcta cttggtaatt tgacagagca ttttaaattg agttttgaag ctgcccagtc
     8881 tcaggccaag gaagttgagt atcttgcagt tgctgaacaa aacctcaaag acctagaaag
     8941 agctattcgt gctttggggc cagtcaattt ggatgctatt gagcagtatg acgaggttaa
     9001 taatcgcctt accttcctca atgagcaacg gacagatatt ttgtcggcgc gtgatttact
     9061 actagatact atccacgaga tggatgatga ggtcaaagag cgcttcaagg ttacttttga
     9121 agctattcgt gaaagcttta agcagacatt caaacaaatg tttggcggtg gttcagcgga
     9181 tttgattttg acagaaggtg acctgttgac tgcgggtgtg gagatttcag ttcaacctcc
     9241 gggtaagaaa attcaatctc tcaatcttat gtcaggtggc gaaaaagccc tttcggccct
     9301 cgctctgcta ttttccatta tccgtgttaa gaccattcct tttgttattc tcgatgaggt
     9361 ggaggcagcc ttggatgagg ccaatgtcaa acgttttggc gactacctca accgttttga
     9421 taaggagagt cagtttatcg tcgtgaccca ccgtaaaggg accatggcgg cagcggatgc
     9481 catgtatggg gtgaccatgc aggaatctgg cgtgtccaag attgtttccg ttaagctgaa
     9541 agatgtggag aaattatgat taacaaaatt tacgccagtg atatggatgg taccttttta
     9601 cgagaagacc atagttttga taaggaacgg tttcgtcgta tactgaatca gtttaaggaa
     9661 aaaggttatt tatttgtggc agcaagtggg cgatctatgc aaagcctgaa acttgttttt
     9721 gaagattttg tagatgaaat cggttttgtg gcagaaaatg gttcaatcgt tgaatatcag
     9781 gggcagacta tctttatgga tgatccaatt agtcctgaaa tctatctgcc gattatcgcg
     9841 ggtattgatg caggtccctt tggtagcagt cgttccatgg tgctgtctgg actcgaaaac
     9901 ttttatttat taaaaaatgc tgagcctcag tttttagaga cgatgacgaa ttattatgca
     9961 cattttcgat tggtagacac atttgaagaa gttcgagaag agattataaa aatcaatgcc
    10021 aaattttctc ctgaggaaat ggacgatgcc agacgatggt taaatgatac atttgaaggt
    10081 gtaacggcca tgacaactgg ttttgacaat attgatataa ttccaaatgg ttcaaacaaa
    10141 tcagttggat tgagtcatct ctgtgctcat tttggaatta ccggtcaggc tgtagtggca
    10201 tttggtgata atcaaaacga tttagatatg tttgactttg caggtctggc tcttgcgaca
    10261 gaaaatgcaa gagaggacgt gaaggccaag gcagattcta ttattggtca ttgcaatgat
    10321 ggagcagtat tagcctattt agaggaggaa gtaaatggca attaagttga ttgcattgga
    10381 tttagatgga acacttctga catcggacaa acggatttca gaagctaata aaaaggcctt
    10441 gcaggcagcg cgtgagcgtg gagtttatgt agttctgaca acagggcgtc ctttacaagc
    10501 tatcggtact tttctagaag aactagatct gctaggggag aatcaatatt cgattacatt
    10561 taacggtggt ctagtacagg aaaatacagg tcgtgttttg gataaggttg gctttaccat
    10621 tgaagatgtg cgcaccatcc gtcgtgtgac aaatgacttg gacctgcctc tggatgtcct
    10681 gtatggtggc gatgtctatt ctctaccatc agcccatgaa tcactttatc taacttgtaa
    10741 tccattgctt aataaaattg tggcaagcga tgaggaaatg ccagaagatt ttgtctacaa
    10801 taaggcagtt tcagctgtgg cagcagactt tttggatgga caaattccaa aaattcctgc
    10861 ggaacttcac gagcgcttcg agattttcaa atcgcgtgat attctgctcg agtggagtcc
    10921 aaaaggtgtt cataaggcaa atggtctggc taagttgatt ggacatctgg ggattgatcg
    10981 gtcagaagtt atggcctgtg gcgatgaagg aaacgatctt tcgatgattg aatgggctgg
    11041 tctgggtgtt gccatggcta atgcgactga tgaaatcaag tctgcggcca aagtagtctt
    11101 accaaaaacc aatgatgaag atggcattgc ctgggccatc gagcactatg tattgaatga
    11161 ggactattat gggattattt gatcgattat ttggacaaga aaaacaagag gagcaagtcg
    11221 ctcttgttga agaagtggaa agggagcagt cggcttctag cgaagataca gtaactactg
    11281 aagttgagtc aacgactcaa gaaatggaag agttccagtc tgaagtagca gagcctgaat
    11341 tgacagccga gcaagaagct cagaaacaac ggaccttaga catgatggct caatattatg
    11401 cagccaaaga agctgctgcg gctcgagtga aggaagcgca ggaacaaggc tttgaccctg
    11461 ctattcaaac caaggtcaag gaagagcctg ttgaggaagt tgctccagta gagcaagaaa
    11521 gtgagcagga caagtaccag cgtaccttga aaaagacgcg tacaggattt ggggcaaggc
    11581 tcaatgaatt ctttgccaat ttccgttctg tagacgaaga atttttcgaa gagttggaag
    11641 aaatgctgat tttgtcagac gtaggtgtac aggttgcttc tacgctgaca gaggagctcc
    11701 gctatgaagc caaactacaa aatgccaaga agacagatga actccgtcgg gttatcatcg
    11761 aaaaattggt ggatatttac gaaaaagatg gtcaattcag cgagcaaatc aatttccaag
    11821 atgatttgac tgtcatgctc tttgtcggtg ttaacggagt tgggaagacg acgtctatcg
    11881 gtaagttagc ctacaagtac aagcaggctg gcaagaaggt catgttggtc gcagcggaca
    11941 ccttccgtgc gggtgcggta gcccagctgg tcgagtgggg tcgccgtgtc gatgtgccag
    12001 tagtcacagg acctgaaaag tcagacccag ctagtgtggt ttttgatggg gtaaaacgtg
    12061 ccgtggcaga aggcgtggat attctcatga ttgacacagc aggccgcttg caaaataaag
    12121 ataaccttat ggcagagctg gaaaaaatcg gtcgtatcat taaacgaaca cttcctgatg
    12181 caccgcatga aaccctctta gcactagatg cctcgacagg acaaaacgcc cttagtcaag
    12241 ccaaagaatt tgcaaaaatt actccattga caggtcttgt tttgaccaag ctagacggta
    12301 ctgcaaaagg tggtgttgtc cttgccatcc gtcaggaact ggatattcca gttaagctga
    12361 ttggtttcgg tgagaaaatc gatgatatcg gagaattcaa gtctgaagag ttcatgcgtg
    12421 ggcttttgga aggattggtg tagaatgaaa aaagtagtta actgtgacag ttagctactt
    12481 ttgtgttttc atttcctcct caacaatgcc tcaatccagt cgggtgcgta gggagaagta
    12541 cagccttttg gcaccttcat atcggaatag acagcgagtt cctgaccgat tacaagtccc
    12601 tgttccaggt agtcaggata ggcaacggca atctctacca agcattggtt catggtccat
    12661 tggacaagcg ggtctgcagt ttgtaaatgc ttgcgaatat ggtctagagt ttcttcaatt
    12721 tcttggtttg ttgctgtttt tccagcaaag tatttggcac ggaggaacca gccaagtctg
    12781 ttaaagatgg cctcgtcttt ggcaagtaag atttcttccc aatccttgct gtcttttcgt
    12841 ttgctgagaa tgatagaagc cagtttgtct aggacattaa cagaaacttc ttcattgagg
    12901 caattctcta ggtcagcttg gggaagctgg tcaggcttat tttttgcaac ttgaatagct
    12961 aaatattgtg cttctaggac acctgtttgc cagagtgggg caaacaagtc cagtcgattt
    13021 ttataggtct tggcgatacc agaaatagct cccattggaa cgccgtagta gggcttggtt
    13081 tcgccaattt tttcataacg cttgagggtg ccagcatggc tggctacttg gagttgggtg
    13141 agaatggtgt ttaattcagt cataaatatc tcccaaaaaa actggattac tccagttttt
    13201 atatgtagtc gtttagtttg cttttagtac aaggcaacga gctgtaggct gtactaaagt
    13261 acggcaaagc gagttaacga agtaatcaaa gataaactaa atgactattt caataagcca
    13321 cgttcacgat accatacatc aggtgtccaa acccacttgc aaccgtagct ttctagcaaa
    13381 tcaaaggctg cctcaggtcc catagttcca gctggatagg tgtggagtgg gacttggttg
    13441 cttgcccaca aatcaacaat gcggtcaatc aagctccagc ttgctttcac ttcttcccaa
    13501 tggctaaagt tggtagaatc accgttcaag acatcgaaaa agagtttctc gtaggcttcg
    13561 ggtgaatttc caagagcagt tgcattgtgg cggaagttga gtttggcagg agtaagagca
    13621 aagtgggaac caacttcctt accgttgata gagagcatga agccttctgt tggctggatg
    13681 aagatggtca atacattggc ctcagaaggc tgaccaaaaa tatcttccgc atgcttgaag
    13741 gtgatggtta cgcgcgtgcc cttttctgtc agacgtttac ctgtacggaa gaagaaaggt
    13801 acatcacgga aacggtcagt atcaacgaag aagacacctc ctgcaaaggt ttctgtctga
    13861 gaaccttcgg caatatttgg ttcatccaag tagctaacgt agtcttttcc gtcaatggaa
    13921 cctgctgcat attgaccacg gatgaagttg cgtttgaggt cctcatcaga aggctgacgc
    13981 aagtgttgga agaccttgat tttctcagcg cggacatctt cctccttgaa gctggctggc
    14041 ttatccattg ctagaaggga aaggacttga agggcatggt tttgcaccat atcttttaag
    14101 gcgccagaat gatcgtagta gcctccacga tcctcaacgc caatcgcttc agcaaatgta
    14161 atttggacgt tatcgatgta atcgcggttc caaatatgct caaaaatgat attggcaaag
    14221 cgaaccgcaa agatattttg taccatttcc ttgcctaggt aatggtcgat acggtagatt
    14281 tggtcttcat taaaagctgc tgccaattca tcattgagtt tggtagctgt agcaaggcta
    14341 gttccgaaag gtttttcaat aatcaagcgt tcaaaacctt gtccatcaac gatttgctca
    14401 gatttgaggt gtttggcaat ggttccgaaa aattcaggcg ccatagagag gaagaagacc
    14461 ttgttgtgct gggtattgta tttttcacac aagtcgtcct gcaatttacg aagagctaca
    14521 taatgttccg tgtcattgac attgtggctt tggtagtaga aatgactagc aaattcatga
    14581 gcttgacgtg gtgtgtcagg cagatcacct agtgattcaa tgacggtttg ctcaaaaaaa
    14641 tccttggtcc agggtctgcg agctgtacca attactgcaa agttttcctt gatgtgtcca
    14701 gccttataga ggcgaaataa agatggatag agtttgcgct tggcaaggtc gccactagca
    14761 ccaaaaattg taaacaatac atgtgatgac ataatttcat tcctatctgt tgaatatcat
    14821 taatagtata ccacaaattg tcagaaaatt cactttttga gttggaatta ttagaaaaca
    14881 cggtagacat acggggaatc tggctgttca atctgaacca tcgattgtaa ttcaagtgtt
    14941 gggagatttt gtttcaacga tgtgtggtag gaaaccttga ttgttcctct ggcttttacc
    15001 caagtattgt taggaaattc tgtggtagcc cccgtagaga gtaagccata taccccagaa
    15061 tcagcaatgc agtgaataat accaaagcgg aaaaggaaaa attgctggct attgtcaggg
    15121 tcattgtaga caaatccaat catttcaatc gtttttcctg aaaattccgt aggatagtcg
    15181 tagattgctt ccatcacttc catatagttt tcattagtaa cgacaatggt ttcttcagcc
    15241 aagtatctat cagcaatttc acgcatctgg ttttgatagg cagattttgt aaaataaata
    15301 gaagtatcag gcttgagata ctgaacagtc gtcccttctt ggttttgtgt attagtatcg
    15361 ttttctgctg ctagtgggaa atgatagccc ttggcagcaa cagttgttga atccaggctg
    15421 accgtaggaa agagccaggc tatagcaaga ggaatgagca atagtccaat gcttgatagt
    15481 ttggcaattt tgctttttaa atggctatgt actcgaattt cttttaccca gacatacaat
    15541 tgtacgatgg caagtatgaa agataaaacc atggatagat aggctagata gctatagtgc
    15601 agattaatgt attggtctaa ttttccagaa atatagagat acatggtcat ttcaaagtaa
    15661 cctgcaagaa ttaaaaaacg aatcatacta cacctccaag tatcagacta tatcccaaaa
    15721 taacgagagt gatagtaatg ataaaaccgg ctataaattt tcccttgaaa taatgtttca
    15781 tcatgagcaa gtttttaaca tccaccatgg gtccgataac taagaaagcc attactgggg
    15841 cgaatccgaa gctggatagt agtgatgcac caataaaggc atcggcttca gaacataggg
    15901 aaagaagaaa ggccagcaac atcatcagta aaatagctgt taatggactg tgaccgatgg
    15961 tagtcaggac agcagttgga atatagactt gtacgagact ggcaaataga caaccaaaga
    16021 ctaggtaacg tcccgtatca aaaaattcat caatggcatg aataagtgcg aagccaactt
    16081 tttgccagct ggttttatct gaataatcat gctggtgatg gtcaaacttg cttcctttaa
    16141 gaattggtcc ttttacgaaa aaaccaagaa tgattcccaa tactagggat acaatgatgg
    16201 ctcctagggc tctatagaag gcgaaaagta gggaattgcc aaaagcggta aaggttgcaa
    16261 aaaggacgat gggattaatc acaggagctg ttactaaaaa gggaacagca gtgtaactcg
    16321 gcactttttt ctctaatagc cgattgacaa tagggacaat accacattcg caagacggaa
    16381 aaatgaagcc gataaaggtt ccaaacagaa tggcaagaaa cttgtttttg ggtaagagtt
    16441 tacgaacctt atctggtgtt ataaacacat cgataaaacc tgaaataata gctccaatca
    16501 agacaaaggg caaggcttca atcatgatag acaggaaaat agcccccgcc tgtaggacgg
    16561 aggtaggtaa ttgattaaga ccgaacatat tattttttat cctgattcaa gttgtttttc
    16621 tcggaatgtt cttttgattt tggatctgga tactcaattt cttccaattt ttcaaatgaa
    16681 gcaaattctt ccagcatctt ttctaaatca tcttgtcgtt tataggttat agccataggg
    16741 cacctccaaa aattttatat acacattata cattttttac taaaaattat ctaaaggaat
    16801 ctgtttttat tgaagcgcaa atatagttag caccctcaaa tcatgatata atattcttat
    16861 gaaaacaaga atatcagaat tagttagcgt gctcaatcaa tacgctaaag agtattatca
    16921 attggaccaa cctagcgtat cagatgcaga atatgatacg ctttatcgtg aattagtaga
    16981 gctagaaacg gcttatccag aactgatttt accagatagt cctacccatc gggtcggggg
    17041 aaaggtgcta gacggatttg aaaaatataa tcatgtttat cctcttttta gtttgcagga
    17101 tgccttttct cgtgaagagt tagaagcttt tgaccagcga gttcgcaagg aatttcctca
    17161 agcaacgtat atctgtgaat tgaagattga tggtctatct atttccctga cctatgaagc
    17221 gggtaattta gtcgtgggtg ctacacgtgg tgacggtagt gtcggtgaaa atatcacaga
    17281 aaatctcaaa cgagtagctg atattccttt gaccctaccc gaagctgtgg acatcactgt
    17341 ccgaggtgag tgttatatgc caaaggcttc ttttgaccgt gttaacaaac agcgtcagga
    17401 ggctggtgaa gctgaatttg ctaatccgcg taacgcagcg gcaggaactc ttcgccaatt
    17461 agacacaggt gtcgtggccc agcgtggact tgcaaccttc ctctaccaag aagctagtcc
    17521 atctgaagcg actagtcagt ccgaagtgct tcgcaagtta gatgctctgg gatttgtgac
    17581 caaccacgaa tattgcttgg cggagtcgat tgatgacacg tgggatttta ttgaaaaaat
    17641 agcagagcgt agagatgatt taccctatga gatagatggt gttgtcatca aggtaaatga
    17701 tttagttata caagaagaac taggatttac agtaaaagcg ccacgatggg cagtagctta
    17761 caagtttcca gctgaggaaa aagaagcaga aatcttgtcg gttgattgga ctgttggtcg
    17821 aacaggtgtt gtgacaccaa ctgccaatct tagtcctgtt caactggcag gaacgactgt
    17881 cagtcgagcg accttgcaca acgtagatta tatcgccgaa aaagatattc gtattggcga
    17941 tacggtcatt gtttataagg caggagatat tattccagca gttctgaaag tggtggacaa
    18001 gtatcgaaaa gaacaagaaa tcatgcccat tcctagtcat tgtccgtctt gtcagagcga
    18061 cctacaacac tatgaggacg aagttgccct ccgctgtatc aaccctattt gtcctagcca
    18121 gctgatgagt aagttggaac attttgcaag tcgggatgcc atgaacatcg caggactagg
    18181 gtcttcaatc gttgaaaaac tctttggagc aggcttggta cacgatgttg ctgatattta
    18241 taaattaact gttgatgacc tattgacctt ggaaggtttc aaagaaaaat cagctgacaa
    18301 gctctatcaa gccattcaaa cttctaagag caactcagca gaacgcctcc tgtttggact
    18361 aggtattcgc catgtaggta gtaaggcaag taagatttta gtagaaaaat ttggtgattt
    18421 agaaacgtta gcatttgctg atcaagaagc aattgcttcg ctagaaggtc ttggtcaggt
    18481 tattgctaag tctttgacaa ctttttttgc tagtgagggt gcgcaacaac ttttagctga
    18541 acttaaggaa gctaaggtaa acttgaccta tcttggacaa gtagtagatg aaaatgctgc
    18601 gctatcgggt atgacagttg tactgactgg taaattggat cgaatgaaac gaaacgaagc
    18661 caaagccaaa ttagaagctt taggggcaaa tgtagcggga tctgtttcta aaaaaactaa
    18721 tcttgtggtt gccggaatag atgcaggcag taaattgact aaagcacagg agctaggtat
    18781 cgaaattaaa gatgaggctt ggttagagag cttgtaaagg taaaacgatg gaagaaagaa
    18841 aacgtgctag actaatatat aatccgacct caggtcaaga aatcatgaag aaaaatgtgg
    18901 ccgaagtatt ggaaattttg gaaggctatg gttatgagac ttcagctttc caaacaactg
    18961 ctgagaaaga ctctgcaaag aatgaagcta cacgtgcggc gcttgcaggc tttgacttga
    19021 ttatcgcggc tggtggagat ggaacaatca atgaagtcgt caatggaatt gctccgcttg
    19081 aaaaacgtcc gcagatggcc atcataccga ctggcaccac caatgactat gcgcgtgctt
    19141 taaaagtgcc taggggaaat cctgtagaag cagctaaggt tattggtaag cagcagacca
    19201 ttttaatgga tattggttta
//
LOCUS       DASFQD010000036        18939 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.036, whole genome shotgun sequence.
ACCESSION   DASFQD010000036 DASFQD010000000
VERSION     DASFQD010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 18939)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18939)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18939
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.036"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(306..653)
                     /locus_tag="U1021_000951"
     CDS             complement(306..653)
                     /locus_tag="U1021_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711503.1"
                     /translation="MKRANSKLAALTLITTLAVTSVIGTTVHADVQEKADQAVSRGFK
                     PIDDESLRKALGNSNPQNYTIRAKLPENTNLKSQGISITGKVEIPSKSSENSSWFWNL
                     WTRFTTFVKGIFS"
     gene            complement(839..1219)
                     /locus_tag="U1021_000952"
     CDS             complement(839..1219)
                     /locus_tag="U1021_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711504.1"
                     /translation="MKRIVTKRSYKVGLCAMALALLMSTAGGVTAGAQDYHVESSGAL
                     KPIGNGTFMKMEYSAFPKDTPIENNGVTELRAINSQNADSANSSDSWFWNLWKKFRTV
                     FQKFIDSGVRRGFGVKNLFKNKWW"
     gene            complement(1651..1965)
                     /locus_tag="U1021_000953"
     CDS             complement(1651..1965)
                     /locus_tag="U1021_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711505.1"
                     /translation="MKQLVTKRSYKIGLSAMALVLLMTTAGGATAHASTGTYSVETRG
                     DAKVYRLLETPAGSFTQGGIVLEPVNNSTTKPSETKSWFDSFWSSVKTFWEAFCRGVG
                     WC"
     gene            complement(2383..2730)
                     /locus_tag="U1021_000954"
     CDS             complement(2383..2730)
                     /locus_tag="U1021_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711506.1"
                     /translation="MKHIVTKRNYKVGACAMALALLMTTAGGAVVNANTHQSFESSYG
                     FSGRGGDGGVLLKLKGPTESVNQGVGNVEPVNPPVTQMAPSEPKSWFGSFWGGVQRLW
                     RALCCGLGFCPSR"
     gene            complement(3205..3909)
                     /locus_tag="U1021_000955"
     CDS             complement(3205..3909)
                     /locus_tag="U1021_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HEM4711507.1"
                     /translation="MKIHVVNNQVEGATVALDILREKLNGDAKVLGLATGSSPLEFYR
                     LIRESDLDFSNVTSVNLDEYVGLGEESDQSYIHFMKENLFNDKPFKKSYLPNGLATDV
                     VAETERYNKILAEHPVDFQILGIGRNGHIGFNEPGAPFDGQTHLVELAPSTIEANTRF
                     FDNPEDVPKQAISMGIANIMAAKTIVLMAYGQEKADAIKATVEGAVTEDVPASVLQNH
                     DNVILILDQAAASKLV"
     gene            4257..5285
                     /gene="queA"
                     /locus_tag="U1021_000956"
     CDS             4257..5285
                     /gene="queA"
                     /locus_tag="U1021_000956"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEM4711508.1"
                     /translation="MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKQSMVDSHFD
                     HIIDQLNPGDALVMNNTRVLPARLYGYKPETMGHVELLLLKNTQGNQWEVLAKPAKRL
                     KVGTTVAFGDGRLTATIVEELEHGGRIVEFSYEGIFLEVLESLGEMPLPPYIHEKLED
                     RERYQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDN
                     VDEHEMHSEFYNLSAEAAQTLNQVKDSGGRIVAVGTTSIRTLETIGNKFDGRLEADSG
                     WTNIFIKPGYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFS
                     FGDAMFIQ"
     gene            5349..5822
                     /locus_tag="U1021_000957"
     CDS             5349..5822
                     /locus_tag="U1021_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HEM4711509.1"
                     /translation="MNKIESRHQLILSLIMEKKIHTQQELQELLEINGVSVTQSTLSR
                     DIKMLNLVKVNEDDSSHYVINPIAPTRWEKRLRLYMEDALVMLKPIQHQVVLKTLPGL
                     ANSFGSILDAMEIPQIVATVCGDDVCLIICEDVEGAQACFEHLKQFTPPFFFSKL"
     gene            complement(6112..10371)
                     /locus_tag="U1021_000958"
     CDS             complement(6112..10371)
                     /locus_tag="U1021_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 16 glycosylhydrolase"
                     /protein_id="HEM4711510.1"
                     /translation="MKKETSKFTKKVILGQLLICTSFLVWAGQTVAAEEVSQGEPVAI
                     NNETPPAIEAKPLVEATPSTETEPSTPEEKQEEPQVADKNVVEGKKPVTNSQHQMVSE
                     LSTVPSVSIKNPDAATDGSAYGSSDDANSNTKIIAGKETGESDNGYSKWDHVYVQYDF
                     EKEVPVHTVKIHRNTYDNAVSTFKDVKVELSTSVDFSPETTEVIFKQADVEETIANKG
                     QPQVIQLPAPINARYIRIWGRGHYIQNTNSSWKGYSNGVLFNEIEVLAQVEADAGTNE
                     EPQTELVNLAKLKKPYFYGKAPTNPEAINDGKFDENYTTQESIGDKAYLQYEFRNVYT
                     IEEIKVQLAPGEYRNFRIDLDDDYNDGNNYNTIYKNENFTIDKEQIITIKTPKNSKAR
                     YVRFRGTRVDDTPLRYSEIQIMGRGKSYDESAPEYVPPKSEYDTLVWSDEFNGDKIDE
                     SKWQIIDGMWNHAAIYNRKAVSIKKDGDKSYLSIRSTNHKDKKALVEAVGHDRYDDKE
                     LPDKVTWSSGRLESKDKYSFQFGRMAVRAKVNDSKGIWPAIWMLAQDETGHDEIDVLE
                     YLGQNPWDAWTTNHFGILAKNKKSDGSAYKNYEAWSQEFHVYEVEWTPDVIKWYIDGK
                     FVFQTDRGKDRDGMHTRPMFPILETQVGDGWVGDVDYKRNMTKQDSEYLVDWVRIYQK
                     ADQSKVHFDNLDDAKPNDYVIKPQQKLGHLVTVSNGKAAHENKNNFYYGGQPRYETSR
                     LYADGDGENALVYKIANPEALHLTTYYKTLEDYSVYNKEAGANEGKSVRKHLINAKDG
                     EIDFTVYSSVDGKSWNKENVTVVDNFVEATPAYARTTFDIRNIRKGTKFVKIVFPTVK
                     GISYKLEDGTEKGLQASDVQLAKVTFVATHPEAEPEKPIVDQEKLALSKVFSLDAGRK
                     YFSVNQIKEIIDLISSYGYTDMNLLLGNDGLRFLLDDMNLTVGDKVYDSEAVRKAIIN
                     GNKHYYDDPNGTTLSQSEMDDILAYAKEKNISIIPTINSPGHMDAIVEAMEELGIKSP
                     KFSYNGKTSARTVDLKNDQAVAFTKALIDKYASYFAGKSKIFNIGLDEYANDATNASG
                     WHILQTQGDYGKFIQYANDLAAIVKKHGLEPMAFNDGIYYNHDTSSGTFDKDIIASFW
                     TGGWGGYDVASSKFLHEKGHKILNTNDAWYYVIGREAEGLGWYNLDQGLRGTKSTRFD
                     QVPKSENTKVPIIGSMVAVWADDPSKPYSYDSIKKLLHSFTENNSDYFWAEYRDLREE
                     VGKIPTDLNSYTPESVATLKEVLNKIDWKLSRNNQAFVDGYLAEVKAAREALVPVTAK
                     GDSVKAEPLPEGKLPLITAKGKSVQAEPRPAFKGYLTSNYGPSVTPLSLVSKPSSEQS
                     RSQQAAYQKKELPNTGAVDGLGFSLLGMLGLAFASRRRKEE"
     gene            complement(10742..12082)
                     /locus_tag="U1021_000959"
     CDS             complement(10742..12082)
                     /locus_tag="U1021_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HEM4711511.1"
                     /translation="MRTSFIQSSHQEACIQAIQELVAFPSVLQEHQADTPFGQAIQDV
                     LEHTLALTEKMGFKTYLDPAGYYGYAEIGQGEELLAILCHLDVVPAGDFSQWQTPPFE
                     AVVEGDYIIGRGVQDDKGPSMAALFAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNR
                     YNQLEEVATMGFAPDSSFPLTYAEKGLLQAKLHGPGHPCLSIEAGTAYNVVPAKASYS
                     GHLLAGVIAELDQLGFDYETKDDQVTVLGISRHAKDAAEGVNAIVRLAKALEHFESHP
                     ALDFIVNAVGEDATGFKLFGDVTDEPSGTLSFNIAGLTISAKKSEIRLDIRIPVTADK
                     EALVSTLQAKAQSCGLTYEEYDYLASLYVPLDSQLVSTLMSVYQDKTGDLTSEPISSG
                     GATFAPTMPNCVAFGACFPDTEQTEHQENERMPLEDLYKTMDIYAEAVYRLAAE"
     gene            complement(12201..13703)
                     /locus_tag="U1021_000960"
     CDS             complement(12201..13703)
                     /locus_tag="U1021_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcC family protein"
                     /protein_id="HEM4711512.1"
                     /translation="MSEKVKKGFKLPSSYTILMLIIAFMAVMTWIIPAGQYQVDEAGR
                     LVAGTYEKVAQNPQGIYDVFMAPVRAMLGHGATEAAINVAFFIIMVGAFLGVVNETGA
                     LDVGIASIVKRFKGREKMLIYILMPLFALGGSTYGMGEETMAFFPLLVPVMMAVGFDS
                     ITGVAIILLGSQIGCLASTVNPFATVVASDAAGVSVADGMIWRLVFFVVILLMGVLFV
                     ANYAEKVKNDPTKSLVYKQREADMQHFNVTATQEVNAELSPAQKRVLWVFVLTFVLMI
                     CSFIPWEDLGVTIFTQFKDWLIGLPFIGQVIGSSTAALGTWYFPEGAMLFGIAGIVVG
                     LVYGMSEERLVKSFMFGAADIFSVALICAIARGIQVIMNDGMITATILHMGEEGLQGL
                     SSQVFIILTYLFYLPMSFLIPSSSGLAGASMGIMAPLGEFVNVPASLVITAFQAASGL
                     LNLVAPTSGIVMGALALGRVEIGTWYKFVGKLIVGIMIASIAILVIATFF"
     gene            complement(14046..14993)
                     /gene="arcC"
                     /locus_tag="U1021_000961"
     CDS             complement(14046..14993)
                     /gene="arcC"
                     /locus_tag="U1021_000961"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003025409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HEM4711513.1"
                     /translation="MANRKIVVALGGNAILSSDPSAKAQKEALVQTAKHLVKLIKNGD
                     DLIITHGNGPQVGNLLLQNLAADSEKNPAFPLDSLVAMTEGSIGFWLQNALENELHKE
                     GIEKDVASVVTQVIVDKNDPAFENLTKPIGPFYTEEEAKAEAEKTGATFKEDAGRGWR
                     KVVASPKPVGIKEIGTIRTLLNAGEVVVAAGGGGIPVVQEADGTLTGVEAVIDKDFAS
                     QCLAELVDADLFIVLTGVDYVFVNYNKPDQEKLETVTVAELEEYIKQNQFAPGSMLPK
                     VEAAIAFVNNKPQSKAVITSLENLGALIESDSGTIIVKG"
     gene            complement(15111..16124)
                     /gene="argF"
                     /locus_tag="U1021_000962"
     CDS             complement(15111..16124)
                     /gene="argF"
                     /locus_tag="U1021_000962"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000195397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEM4711514.1"
                     /translation="MTNVFKGRHFLAEKDFTRAELEWLIDFSAHLKDLKKRNIPHRYL
                     EGKNIALLFEKTSTRTRAAFTVASIDLGAHPEYLGANDIQLGKKESTEDTAKVLGRMF
                     DGIEFRGFSQKMVEELAEFSGVPVWNGLTDAWHPTQMLADYLTVKENFGKLEGLTLVY
                     CGDGRNNVANSLLVTGAILGVNVHIFSPKELFPEEEVVALAEGFAKESGARVLITDNA
                     DEAVKGADVLYTDVWVSMGEEDKFAERVALLKPYQVNMELVKKAENENLIFLHCLPAF
                     HDTNTVYGKDVAEKFGVEEMEVTDEVFRSKYARHFDQAENRMHTIKAVMAATLGDPFV
                     PRV"
     gene            complement(16143..16583)
                     /locus_tag="U1021_000963"
     CDS             complement(16143..16583)
                     /locus_tag="U1021_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4711515.1"
                     /translation="MPSIERTTIGSEEWQRAASIYVRYKVFVLERGIAKEDEFDQNDT
                     EGRVYANLFIGEEPVSTGRFLPVGPGQARLTRIATLPNFRGKGYGKMIISSLEAYARE
                     AGFHQLNIHSELTAKTFYESVGYQATSEVYQEDGEWCQTLTKFI"
     gene            complement(16583..17815)
                     /gene="arcA"
                     /locus_tag="U1021_000964"
     CDS             complement(16583..17815)
                     /gene="arcA"
                     /locus_tag="U1021_000964"
                     /EC_number="3.5.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012560827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase"
                     /protein_id="HEM4711516.1"
                     /translation="MMSNHPIHVFSEIGKLKKVMLHRPGKEIENLMPDYLERLLFDDI
                     PFLEDAQKEHDAFAQALRDEGVEVLYLEKLAAESLVTPEIREQFIDEYLEEANIRGRA
                     TKKAIRKLLMSIEDNQELVEKTMAGVQKAELPEIPSEEKGLTDLVESSYPFAIDPMPN
                     LYFTRDPFATIGNAVSLNHMYSETRNRETLYGKYIFTHHPEYGGKVPLVYNREATTRI
                     EGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFEQHVGFKKVLAFEFANNRKFMHLD
                     TVFTMVDYDKFTIHPEIEGDLRVFSVTYENDTLHIEEEHGDLAELLAANLGLEKVELI
                     RCGGGDMVAAGREQWNDGSNTLTIAPGVVVVYKRNTITNAILESKGLRLIKIGGSELV
                     RGRGGPRCMSMPFEREDI"
     gene            complement(18074..18769)
                     /locus_tag="U1021_000965"
     CDS             complement(18074..18769)
                     /locus_tag="U1021_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM4711517.1"
                     /translation="MISNEQYDYLRAHPTFERLTRDSFDQLAKHIRFRKIPKGQIFFY
                     AEDPRDYLFVLYKGYARIEQYDETDSFTYLDYIRQGGAFPFGDMFQDKPYHYTAIAIT
                     DLEYFIVPMVLFETLSKINPSQMAYICQKLSKVLRFQELRLRNAMRSKASDRVVQALA
                     LLYWDMCQRDQFATLPFEIHIQEISRLAATTRETVSHVLKQLKQDGKIAYSHKQLTYL
                     DIDYFLENLTETH"
BASE COUNT         5745 a         4086 c         3303 g         5805 t
ORIGIN      
        1 aagaatatac ctgttacaca aagactgtgt tttttatcga tgcaatataa aaagtttaga
       61 acaattacat cctaaacttt tcactcttta atttatctaa gaaaaattac aaccgagact
      121 caagaaatat ggaattcgtg tcaacatctc attcgcaaaa aatgtgaggc tattacataa
      181 tttcttgcac aatctctagt ttagatacct agatctctcc aatatttcat acgcttttca
      241 tttgaataaa agctcacatg aaccactctt ctctatccat atgaagtcaa cgaaaaatag
      301 aaatcttagc taaaaatacc tttgacaaaa gttgtaaaac gagtccaaag gttccaaaac
      361 catgaagagt tttcagaaga tttagatgga atttcaactt ttccggtaat acttattcct
      421 tgacttttga gattggtatt ttctggtagc ttagcacgta ttgtatagtt ctgtgggtta
      481 ctatttccaa gtgcttttct cagtgactcg tcatctattg gtttaaaacc gcgtgacact
      541 gcttggtcag ctttttcttg aacatcagca tgcaccgttg tcccaatcac agaggtaacc
      601 gcaagagttg taatgagtgt taaagctgct agttttgaat tagctcgttt catgaaatgt
      661 ctccttttgt aaaaatgaaa cctgcctcta cccaaaagag caatggcagg aatgctatat
      721 tgaggttata aatatatatg aaaaaatttt taagggtaat atagaaaaat taccaagatt
      781 tacatattaa aatctacaca ataactttac atatatttta ggtcaaataa attctagatt
      841 accaccattt atttttgaac aaatttttca caccgaaacc acgacgtact ccactgtcaa
      901 taaatttttg gaaaactgtt ctgaatttct tccataagtt ccaaaaccaa gaatcagatg
      961 aattagctga atcagcattc tgactattaa tagctctcaa ctcagtgacc ccattattct
     1021 caataggagt atccttagga aaagctgagt attccatttt cataaacgtt ccatttccaa
     1081 ttggcttaag agcacctgat gattcgacat gatagtcttg tgcaccagcc gttacgccac
     1141 ctgcagtgct catcaacaga gcaagagcca tagcacacag accaacttta taactacgtt
     1201 ttgttacaat acgtttcatt tttgaaatgt ctcctttata caatattcgc ccttttctag
     1261 acaatgtagt gccagtatag cacaaaaaaa taacgtaaat cccaacttta gagaaagatt
     1321 agataaaaaa ccattaaatt ccaaaaaata aaaatattaa tataaaaatc aggaaatagg
     1381 atacgctccg ttcaagagaa ccttgtctcg aataagcgaa gtaataaaaa agaatatccc
     1441 taaaaaattt aaaaccctct attttcacag agggcatact attttgagtt atattattaa
     1501 agttatgaat gtatagatga aaaagatttt taagagggta atattataga aaattaaaaa
     1561 tttaagaaag attaatgaag gtatgaagga tttgcaaatt taattgacta aatattacaa
     1621 gattataact caaaatagta aacattctac ttaacaccat ccaactccac gacagaatgc
     1681 ttcccagaat gtttttacac tactccaaaa agaatcaaac catgatttgg tttcagatgg
     1741 tttagttgta gaattattca caggttccaa aactatgccc ccctgtgtaa aagaccccgc
     1801 cggagtttcc aacagcctat acactttggc atcacctcga gtttcgacac tataggtacc
     1861 cgtacttgca tgtgcagtgg caccacctgc agtggtcatt agcaagacca aagccatagc
     1921 actcaaacca attttataac tacgttttgt tacaagttgt ttcattgttg aaatatctcc
     1981 tttatacgat attcgtctct acaaatgata gtatagcaca aacagacaac tcaaattcca
     2041 actttagaaa aaggttagat aaaaaactat aaaactccaa gatatagaaa tattaatata
     2101 aagacaaaaa atacacatgc aatgtttgtg gttcaaaaaa acttgtatcg aataattgtg
     2161 gtaataaaga aaaaatgttt aaaaccctct attttcatag agggcatact aattcgagtt
     2221 atattattga agttatgaat gtatagatga aaaagatttc taagagggta atatatagaa
     2281 aattaaataa tttaagaaag ttagtgaagt atgaaggatt tacaaattta attgactaaa
     2341 tattacaaga ttataaaatc actataaaaa atcatgcaca ccttaacgtg atggacaaaa
     2401 gcctaatcca caacaaagtg ccctccacaa tctttgtaca ccaccccaaa atgaaccaaa
     2461 ccatgatttt ggttcagaag gagccatttg agtcacaggt gggttgacag gctcaacatt
     2521 tccaacccct tgattgacag attcagtcgg ccccttcagt tttaggagaa caccaccatc
     2581 tcctcctcta ccagaaaaac catatgacga ttcaaaagac tgatgagtat ttgcatttac
     2641 aactgcacca cctgcagtag tcatcaacaa tgcaagtgcc atagcgcatg cgccaacttt
     2701 ataattacgt tttgttacaa tatgtttcat gatgaaacat ctcctttgta tggatatttg
     2761 cttcctccta tcggaaacgt agtaacagta tagcacaaaa aaataactca aaaaccaact
     2821 ttagaaaaag attatataaa aaccagaaaa ctacctgaaa aaaatgaaaa cgttatacaa
     2881 aacgtagaga aaatgatact atttcgccca tttcacttat ccctatcaat tttcaacatg
     2941 ataaaggata gcaatttagt aatacctctt gttgaaattt tctctcacat ccaacttaat
     3001 gttatatata atccattcaa atatataaca actgatatgg attatcagaa tagcaaaagg
     3061 catgccctta aaaatataag ttacatgcct tttcacaatt tttgtcaaat tcataatgga
     3121 aaaagaacct agattcattc agaaattata cttattgtac tgttacaacc aactttatgt
     3181 ctaagaataa tcgtttacaa catactacac taatttactc gctgctgctt ggtcgaggat
     3241 gaggatgaca ttgtcatggt tttggaggac gcttgctggg acatcttctg tcactgcccc
     3301 ttccacagtc gccttaatgg cgtcagcttt ttcctgacca taggccatga gaacaatggt
     3361 cttggctgcc ataatgttgg cgatgcccat ggagatagct tgttttggta catcttctgg
     3421 attgtcaaag aagcgggtgt tggcttcaat ggttgatggc gccaattcaa ccagatgagt
     3481 ctgaccatca aatggagcac ctggttcgtt gaaaccgata tggccgttgc gaccgatacc
     3541 caaaatttgg aaatcaaccg gatgttcagc caaaatttta ttgtaacgtt ctgtttcagc
     3601 aactacatct gtcgccaaac cattcggtaa ataagatttc ttaaacggtt tgtcattgaa
     3661 aagattttcc ttcataaaat gaatatagga ttggtcgctc tcctcaccta gaccaacata
     3721 ctcatccaag tttacagatg tcacattcga aaagtctaaa tctgactcac gaatcaatct
     3781 gtaaaattct aacggactgg agcctgttgc caaacctaat accttggcat ctccgttcaa
     3841 tttttctctc aaaatgtcta atgctacagt tgctccttca acttgattgt ttactacatg
     3901 aattttcata acacccctct ttggtctata ccatttattg tttttcttta ttatatggta
     3961 tagaccaatt tttgtcaaga atttatacct atagagtatt acatcagcac gaataatttt
     4021 aattctcttc ccatccatca agacttaagt gtctaactat gatataatac atttatgaca
     4081 gatgtgcttt tttacttatt ttttattggt attctgttct gccttactgg ctattttatt
     4141 tctaaatcaa aggtcctaaa gtttattttc tacctgattg gtagtctatt ggtggctttg
     4201 ccatttgccc tattgattta ttttacctat attttatttt agtctaagga gtgaatatga
     4261 atactgcaga ttttgatttt gatttacccg aagagcttat cgctcaagtt ccccttgaaa
     4321 agcgcgacag ctctaaacta ttgatcctcg accgcgaaaa acagagcatg gttgacagtc
     4381 actttgacca tatcatcgac cagttgaatc ccggtgatgc cctggtcatg aacaatacac
     4441 gtgttctgcc tgcccgtctc tatggctaca agcctgaaac tatgggacat gttgagcttt
     4501 tgcttttgaa aaatacccaa ggtaatcagt gggaagttct tgccaaacca gcaaaacgtc
     4561 tgaaggtcgg taccacagtc gcttttggtg acggacgatt aactgctact atcgtagaag
     4621 aattagaaca cggtggtaga attgttgaat tctcctatga aggtatcttc cttgaagtct
     4681 tggaaagtct aggcgaaatg ccacttccac cttacattca tgagaaatta gaagaccgcg
     4741 aacgctatca aacagtttat gccaaggaaa acggttctgc cgcagctcca actgctggac
     4801 tacatttcac ccaagagtta ctcgaaaaaa tcgaagctaa aggagtgaaa ctagtctatc
     4861 tgactcttca cgttgggctt gggaccttcc gaccagtctc tgttgataac gttgatgagc
     4921 atgaaatgca ctcggaattc tataacctat cagcagaagc tgctcaaacc ctcaatcagg
     4981 tcaaagatag cggtggtcgt atcgtcgcag tcggcacgac atccatccgc accctcgaaa
     5041 ccatcggtaa taaatttgat ggccgtttgg aagctgattc tggttggaca aatatcttca
     5101 tcaaacctgg ctacaccttc cgaatcgttg atgccttctc aaccaatttc cacctaccaa
     5161 aatctacttt ggttatgcta gtttctgcct ttgcaggtag agaatttacg ttagatgcct
     5221 ataaacatgc tgttgaagaa cgctaccgct tctttagttt tggggatgca atgttcattc
     5281 aataggctgt tatcaccaaa ttattctgag ttcagatttt attttcctta catctcaagg
     5341 agggccctat gaacaagatt gaaagccgcc atcagctgat cctgtctcta atcatggaga
     5401 agaaaataca tacccaacag gaattgcaag aattactaga gatcaacgga gtctccgtca
     5461 cccaatctac cctctcccgt gacatcaaga tgctcaatct tgtcaaagtc aatgaagatg
     5521 attcttctca ctatgtcatc aaccccattg ctcctactcg ctgggaaaaa cgactgcgac
     5581 tctatatgga agatgctctg gtcatgctaa aacctatcca acatcaagtg gtgctcaaga
     5641 ccctacctgg attggccaac tcattcggtt ctattttgga tgccatggag attcctcaaa
     5701 ttgtagcgac tgtctgcggt gacgatgtct gtctcatcat ttgtgaagat gtcgaggggg
     5761 cacaagcttg cttcgagcac ttgaaacagt ttactccacc atttttcttt agtaaattat
     5821 aaaaatttgt gttcacaaac aaatacttaa ttttaaagat aatttttcaa ataaatatca
     5881 acaacttccc tttatactca taaacgaaaa tctcccgtaa taagatttat tacgggggat
     5941 ttttagtagc ctataaaaaa ttatcctatt attcatagcc ttctagttta ctttttgtac
     6001 aaggcaatga gctacatgct atacttgggt acagcaaagc gagtgaaaga aaaactagat
     6061 aactatataa ttacaattag aaagccctga accttaattc aagtggctac attactcctc
     6121 cttccgccgg cgactagcaa atgccagacc aagcatacca aggagagaga atccaagacc
     6181 atctactgcg cctgtatttg gcaattcttt cttctgataa gctgcttgct gggagcgtga
     6241 ctgctcacta cttggttttg atacgagaga taaaggtgtg acagatggtc catagtttga
     6301 ggttaggtat cccttaaagg cagggcgtgg ttctgcttgg acactttttc ctttagcagt
     6361 aatcagaggt agcttgcctt ctggtaaggg ctccgctttg acgctgtctc cttttgctgt
     6421 cacaggaact aacgcttcac gcgctgcttt tacttctgcc aagtaaccat caacaaacgc
     6481 ttggttattt ctacttagtt tccaatcaat cttgttcaag acctctttta aagtcgccac
     6541 gctctctggt gtataggaat ttaaatcagt aggaatcttc ccaacttctt ctcgcaaatc
     6601 tcggtactct gcccaaaaat aatcagaatt gttttccgta aaactgtgca aaagtttttt
     6661 aattgagtca tagctgtaag gcttgcttgg gtcatctgcc cataccgcaa ccatgctacc
     6721 gataatgggt accttagtat tctcagattt cggtacttga tcaaaccttg ttgatttagt
     6781 tcctcgaaga ccttgatcaa ggttatacca tcccaaacct tctgcttcac gtccaataac
     6841 atagtaccaa gcatcatttg tattaagaat tttatgccct ttttcatgaa ggaattttga
     6901 ggaagcaaca tcatatcctc cccaacctcc tgtccagaaa gaagcaataa tgtctttatc
     6961 aaaagtaccc gaactagtat cgtggttata atagatacca tcattgaaag ccattggctc
     7021 taaaccatgc ttcttgacga tagctgctaa atcattggca tattgaataa acttaccata
     7081 atcaccttgt gtctgaagaa tgtgccatcc agaagcattt gtagcatcgt tagcatactc
     7141 atctaagcca atattgaaaa ttttagattt gcctgcaaag taactagcat atttatcaat
     7201 taaggcttta gtaaaagcaa ctgcttggtc attttttaaa tcaactgtac gtgcagatgt
     7261 tttgccatta taactaaatt ttggcgattt tatccccaat tcttccattg cttctacaat
     7321 cgcatccata tgacctgggc tattgatagt tggaataatg gaaatatttt tttccttagc
     7381 ataagcaaga atatcatcca tctcactctg acttaaggtt gtaccgtttg gatcgtcata
     7441 ataatgctta ttaccattta ttattgcttt tctaactgct tcactgtcat acaccttatc
     7501 tccaacggtc aaattcatat catctaataa aaatctcaga ccatcatttc ccaataagag
     7561 gttcatatcc gtgtaaccat aagaagaaat taaatcaata atctccttta tctgatttac
     7621 agagaaatac ttgcgaccgg catcgagtga aaaaactttg gacaaggcta gtttttcttg
     7681 atcaacaata ggtttttctg gttctgcttc aggatgagta gctacaaaag ttacttttgc
     7741 taactggaca tcactggctt gcaggccttt ctctgttcca tcttccaact tataggaaat
     7801 acctttaacc gttggaaaga cgatcttcac aaatttagta ccttttcgaa tgttgcgaat
     7861 atcaaatgta gtgcgtgcat aagctggggt tgcttctaca aaattatcca ctacagtaac
     7921 attctcttta ttccagcttt tgccgtcaac agatgagtac acagtgaagt caatttcacc
     7981 gtcttttgca tttatcaaat gtttgcgaac agattttcct tcattagccc ctgcttcttt
     8041 attatagaca gaatagtctt caagtgtttt gtaataagtt gttaagtgca aagcctctgg
     8101 attagcaatc ttgtaaacta gtgcattttc gccatcacca tcagcataga gcctgcttgt
     8161 ttcgtaacgt ggttgacctc catagtagaa attatttttg ttttcatgag ctgctttccc
     8221 gttagagact gttacgaggt gaccaagttt ttgctgcggc ttaataacat aatcattagg
     8281 cttggcatca tctagattat caaaatgtac cttactttga tctgcttttt gataaattcg
     8341 aacccaatca accaagtact cactatcctg tttagtcatg ttgcgtttgt aatcaacatc
     8401 accaacccag ccatcaccaa cttgggtttc cagtatcggg aacatagggc gggtgtgcat
     8461 accatcccga tccttaccac ggtctgtttg aaaaacaaat tttccatcaa tataccattt
     8521 gatgacatct ggagtccatt cgacttcgta gacatggaat tcctgactcc aagcttcgta
     8581 attcttataa gctgagccat cagatttttt attttttgcc aaaataccaa aatggttagt
     8641 tgtccatgca tcccatggat tttgaccaag gtattccaaa acgtcaattt cgtcatgccc
     8701 ggtctcatcc tgtgccaaca tccaaatagc aggccagatt cccttagagt catttacctt
     8761 agctcgaaca gccattcgac caaattggaa agaatactta tctttagatt ctaggcgacc
     8821 agaagaccat gttactttat ctggtaattc tttatcatca taccgatcgt gcccaactgc
     8881 ttcaaccaaa gcttttttat ccttatggtt cgtgctacgg atagacaaat agctcttgtc
     8941 gccatctttt ttgatagaaa ctgctttacg attgtatata gccgcatgat tccacatgcc
     9001 atcaataatt tgccatttac tttcatcaat cttgtcgcca ttaaattcat cagaccagac
     9061 taatgtatcg tattcagatt ttggtggaac atattctgga gcagattcgt cataagattt
     9121 tcctcgtccc ataatctgaa tttctgaata gcgaagagga gtatcatcta cgcgcgtacc
     9181 tctaaagcga acataacgcg ccttagaatt ttttggagtt ttaatcgtta tgatctgttc
     9241 cttgtcaatg gtgaaatttt cattcttata gattgtatta taattattac catcattata
     9301 atcatcatcc aaatctatcc ggaaattacg atactctcca ggagctaact gaaccttgat
     9361 ttcctcaata gtatagacat ttctaaattc gtattgaaga taagctttat cccctattga
     9421 ttcttgagta gtataattct cgtcgaactt tccatcgtta atggcttctg gattagttgg
     9481 agccttacca tagaaatatg gttttttcaa tttagcgagg ttgactagct cggtttgtgg
     9541 ttcttcattc gtaccagcat ctgcttcaac ctgcgccaag acttctatct cgttaaagag
     9601 aacgccatta ctatatccct tccatgaact gtttgtattt tggatataat gcccccgtcc
     9661 ccaaatacga atataacgag cattgattgg tgctggtaat tggatgactt gaggttgtcc
     9721 tttatttgca attgtttctt ctacatctgc ctgtttgaaa atgacttctg tggtttcagg
     9781 agaaaaatct acacttgtag acaattccac tttaacatct ttaaaagtag agactgcatt
     9841 atcataagta ttacgatgaa tttttacagt atggacggga acttcctttt caaaatcata
     9901 ctgaacgtaa acatgatccc acttggagta accgttatct gattcgccag tttctttacc
     9961 agcaatgatt ttggtattgc tattggcatc gtcgctacta ccgtaagcac tcccatcggt
    10021 agctgcatct ggatttttta tagaaacaga agggaccgtt gataattccg aaaccatctg
    10081 atgctggctg ttagttacgg gctttttccc ttctaccaca tttttatcag ctacttgtgg
    10141 ttcctcctgt ttttcttctg gagttgaagg ttctgtttca gttgatggag tagcttccac
    10201 aagtggtttt gcttcaatag caggtggagt ttcattgttg attgctactg gttccccctg
    10261 agatacttcc tctgctgcaa cggtctgccc tgcccatacc aaaaaactgg tacagatgag
    10321 aagctgacca aggatgactt ttttcgtaaa cttacttgtt tcttttttca ttatttcctc
    10381 ctataaagtc tgcaagttta tcctacctat agccaaaata aagcagtttt taaacctatt
    10441 tagtctcgta taagactcaa aattcagttt actggttgat gtgcgatcgc atttctgaca
    10501 caaatataac atgtaagcgt tttattgtag aatagtctaa cttgacttat tctatatgca
    10561 gatgggttct atttctaaaa cagcatataa taagtcacac tttcatatat ttttgtatac
    10621 ttatcgtaaa tagtgacaca tttctatctc atctttctaa tgatattctt cataagaaaa
    10681 gcccttagat atttcactaa gagctttgaa actgtaattt actattcaat actgataatg
    10741 gctattccgc agctaggcga tagactgcct cagcataaat atccattgtt ttatataagt
    10801 cttccaatgg catgcgttca ttttcctgat gctctgtttg ttctgtatct gggaaacatg
    10861 caccaaaggc cacacagttt ggcatagtag gagcaaaggt agccccacct gacgagattg
    10921 gctcgcttgt taaatctcct gtcttatctt gataaacaga catgagcgta gataccagct
    10981 ggctgtctaa tggcacatac aaggaagcaa ggtagtcgta ctcttcatag gtcaagccac
    11041 atgattgcgc tttggcttgt aaagtagaaa ctagggcttc tttatccgca gtgacaggaa
    11101 tacgaatgtc caagcgaatt tctgattttt ttgcgctaat ggttagacct gcaatattga
    11161 aactgagtgt ccctgatggt tcatcggtca catcaccaaa aagcttaaat cctgtggcat
    11221 cttcaccaac tgcattgacg ataaagtcca aggctggatg actttcgaaa tgttccaaag
    11281 cctttgccaa acgaacgatg gcattgaccc cctcggcagc atccttggcg tgccgcgaaa
    11341 taccaagaac cgttacttga tcatctttgg tttcataatc aaagcctaat tgatctaatt
    11401 ccgcaataac tccggctaat aaatgaccag aatagcttgc cttggcaggt actacgttat
    11461 aggcagttcc cgcttcgata ctcagacaag ggtgacctgg accatgcaat ttggcctgta
    11521 gcaatccttt ttcagcataa gtcaaaggga aggaagaatc tggtgcaaag cccatagttg
    11581 ctacttcttc caactgattg tagcggttca tacaccgcca taaggtctct tcatctgttc
    11641 caaaaatgaa acgaatccgt ttgttaaatt ggactcccgc atcaagaagt gcttttactg
    11701 caaataaggc cgccatcgaa ggacctttat catcctgaac cccgcgtcca ataatataat
    11761 ctccctctac cacagcctca aaaggcggcg tctgccattg actaaaatca ccagcaggta
    11821 ccacatctaa gtggcaaagg atagctaata attcttcgcc ttgcccaatt tcagcatagc
    11881 cgtaataacc agcagggtct aaataagttt taaaacccat tttttccgtc aaagccaacg
    11941 tgtgctccag aacatcctga atcgcttgac caaatggcgt atctgcctga tgttcttgca
    12001 aaacagaagg aaaagcaacc agttcttgga tggcttgaat acatgcctcc tgatgcgatg
    12061 actgaataaa acttgttctc attgtgtccc ctttcaacat aataagatat gatatatttt
    12121 ctagcactat tctatcataa aaggaaaaac tgagccaaat tttatctgta ttcgtgataa
    12181 aatctgaccc agaatttcga ttagaagaat gtcgcaatga ccaaaatagc tatggaggca
    12241 atcatgatgc ctacgattaa cttacctaca aatttatacc aagtaccaat ttcaacacga
    12301 ccaagtgcca aggctcccat tacaatacct gatgttggag ccaccaagtt caagagacct
    12361 gatgcagctt ggaaagctgt gataaccaag cttgctggta catttacaaa ctcaccaaga
    12421 ggtgccatga tacccataga agcccctgca agacctgatg aagatggaat caagaaggac
    12481 attggtaggt agaagagata ggtcaaaatg atgaatactt gtgaagataa accttgcaat
    12541 ccttcttcac ccatgtggag aatagtggca gtaatcatac catcgttcat gatgacttga
    12601 ataccacgcg cgatagcaca aatcaaagct acgctgaaaa tatcagccgc accgaacatg
    12661 aaggatttta ccaaacgttc ttcactcata ccataaacta aaccaactac aatccctgcg
    12721 ataccaaaga gcattgctcc ttctgggaag taccaagtac caagagcagc tgttgaagaa
    12781 ccaatcactt gaccgatgaa cggaagacca atcaaccaat ctttaaattg tgtaaagata
    12841 gtaacaccca aatcttccca tggaataaag ctacaaatca tgagaacaaa tgttaataca
    12901 aatacccaga gaacacgttt ttgagctggt gataattctg cattcacttc ttgagttgct
    12961 gttacattaa agtgttgcat gtccgcttca cgttgtttat aaaccaagga cttagtcgga
    13021 tcgtttttca ctttctcagc atagttggct acaaagagaa cccccatcaa gagaataaca
    13081 acgaagaaga ccaagcgcca aatcataccg tccgcaacac ttacacctgc tgcatcagag
    13141 gctacaaccg ttgcaaatgg gtttacagta gaagccaaac agccgatttg agaacctagc
    13201 aagatgatgg ctacaccagt aatactatca aaaccaaccg ccatcataac aggaacaagg
    13261 agcgggaaga aagccattgt ttcttcaccc ataccatagg ttgagcctcc taaggcaaac
    13321 aaaggcatga ggatgtaaat caacattttt tcacgacctt tgaagcgttt tacaatagaa
    13381 gcaatcccta catcaagtgc acctgtttcg ttaactacac caagaaaggc gccaaccatg
    13441 atgatgaaga atgctacgtt aatcgctgct tcagtcgcac cgtgaccaag catggcacga
    13501 actggagcca taaaaacatc gtaaatccct tgtggatttt gagcaacctt ctcataggta
    13561 ccagccacca aacgtccggc ttcatccacc tgatattgac cagctggaat aatccatgtc
    13621 atcactgcca taaaggcaat aatgagcatc aatattgtat aagacgaagg caatttaaag
    13681 ccttttttca ctttttcgct catcgcaaaa acctcctata atattttaaa agtttatccc
    13741 ctatttaagg gaaattgtat ccgtaataac cgtatcaaat acccacctat cttcaagaga
    13801 tgtctatctc cttcagtcta ttatctgaaa tcattgctta tagatagata cttgatagga
    13861 aatggatgag aggggaggga gcttagaagc ccagaccttc atgtttagat taaagggaac
    13921 ccttgtggga ctatcaacac tttcactccc ctaactccat caataaataa cccgtctagt
    13981 ttaaaaacta tatttgcatg cagagtacat caataaatag aagcctcaac gatacataca
    14041 gctgcttagc ctttgacaat gatagtgccg ctatcggatt caatcaaagc acctaagttt
    14101 tctaatgagg taatgactgc ttttgattgc ggcttattgt ttacaaaagc aatagctgct
    14161 tcaactttcg gtagcatgga acctggtgcg aattgatttt gtttgatata ttcttccaat
    14221 tcagccacag taacggtttc taatttttct tggtctggtt tgttgtagtt aacaaagaca
    14281 tagtccacac ctgtcaagac gataaacaag tctgcatcaa ccaattctgc caaacattga
    14341 gaagcaaagt ccttatcgat aactgcttcc acaccggtaa gagtaccgtc tgcttcttgg
    14401 acaactggaa tacctccgcc tccagcagct acgactacct cacctgcatt gagaagggta
    14461 cgaatggtac caatttcttt gattcctaca ggttttggcg aagcaacgac tttgcgccag
    14521 ccacgaccgg catcttcttt gaaggttgca ccagtctttt ctgcttctgc tttcgcttct
    14581 tcttctgtat agaatggtcc aatcggcttg gtcaaatttt cgaaggcagg atcattctta
    14641 tccacgataa cctgggtcac aacagatgct acatcttttt caatgccttc tttgtgcaat
    14701 tcattttcca aggcattttg caaccagaaa ccgatcgaac cttctgtcat ggctaccaaa
    14761 ctgtctagtg gaaaagctgg gttcttttcc gaatcagcag caaggttttg aagaagtaag
    14821 tttccaacct gaggaccatt accatgcgtg ataataaggt cgtccccatt ttttatcaat
    14881 tttacaaggt gcttggctgt ttgtaccaag gcctcttttt gtgctttagc cgatgggtcg
    14941 gacgataaaa tggcattgcc acccaaggct actacaattt tacgatttgc catatctctt
    15001 gctttttcct cactttcgcg aaatagtaat cgcttacaca tctatcctca aaatatgggg
    15061 gctgggtgcc agcccccgga ggttgcgatg cgttattaga tagttaatta ttacacacgt
    15121 ggaacaaatg gatcccctaa agtagccgcc atcactgctt taatagtgtg catacggttt
    15181 tcagcttggt cgaagtgacg agcatatttg ctacggaata cttcgtctgt tacttccatt
    15241 tcttctacgc cgaatttttc agcgacatct ttaccataaa cagtgtttgt atcatggaag
    15301 gcaggcaagc agtgcaagaa gatgagattt tcattttctg cttttttcac caattccata
    15361 ttcacttggt atggtttcaa gagggcaacg cgttctgcaa atttatcttc ttcacccatt
    15421 gatacccaaa cgtcagtata aagaacatct gcacctttga ctgcttcgtc agcattatca
    15481 gtaatgagaa cacgtgctcc actttctttc gcaaaacctt cagccaaggc aactacttct
    15541 tcttctggga agagttcttt tggagagaag atatggacat tgacacctag gatagcgccc
    15601 gttaccaaaa gtgagttagc aacgttgtta cggccatcac cacagtaaac cagagtcaaa
    15661 ccttccaact tgccaaagtt ttctttgaca gtcaagtagt ccgccaacat ttgagttggg
    15721 tgccatgcgt ctgtcaaccc attccatact ggcacaccag agaattctgc caattcttcc
    15781 accatttttt ggctgaaacc acggaattca ataccgtcga acatgcgtcc caaaacttta
    15841 gcagtatctt ctgtagattc tttcttacca agttggatgt catttgcacc aagatattct
    15901 ggatgcgctc caaggtcaat ggaggctact gtgaaggcag cacgagtacg tgttgatgtt
    15961 ttttcaaaca agagagcaat atttttacct tccaaataac ggtgtggaat attgcgtttt
    16021 ttcaaatctt tcaaatgagc tgagaaatca atcaaccatt ccaattctgc gcgtgtgaaa
    16081 tctttctctg caaggaaatg tctaccttta aatacgtttg tcattgtctc ttctcctaat
    16141 gtttaaataa attttgtcaa tgtctggcac cattctccat cttcttgata aacttcagaa
    16201 gttgcttggt agccaactga ctcataaaaa gtctttgcag ttaactccga atgtatattc
    16261 aactgatgaa agcctgcttc acgtgcataa gcttccaaag agctgataat catttttcca
    16321 tagccttttc cacgaaaatt cggtagagtg gctattcggg ttagacgagc ttgaccagga
    16381 ccgacaggaa gaaaacgtcc cgttgaaaca ggctcttcac caataaagag attggcgtaa
    16441 actcttcctt ccgtatcatt ctggtcaaat tcatcttcct ttgcaatacc acgctcaagg
    16501 acaaatacct tatagcggac atagatagag gctgcgcgtt gccattcttc cgaaccgatt
    16561 gttgttcgtt ctatactcgg cattagatgt cttcccgttc gaacggcatt gacatacaac
    16621 gaggtccacc acgaccacga accaattcgc ttccgccaat cttaatcaaa cgaagccctt
    16681 tggactcgag gatagcattg gtaatcgtat tgcgtttgta aacaactacc acacctggtg
    16741 caatagtcaa tgtatttgaa ccatcattcc attgctcacg accagcagca accatatcac
    16801 cgccaccaca acggatcaat tctacttttt caagaccaag gttcgcagcc aaaagttctg
    16861 ccaagtcacc atgttcttct tcaatatgaa gtgtatcatt ttcataggtt acagagaaga
    16921 cacgaaggtc accttcaatt tctgggtgga tagtaaactt atcatagtca accatggtaa
    16981 atactgtatc caagtgcatg aatttacggt tgttagcaaa ttcgaatgcc aatactttct
    17041 tgaagccaac atgctgttca aagatattta ccaatagttt ttcaattgat gcagcatcgg
    17101 tacgttgtga aatacctact gccaaaacat cttttgaaag aaccaattcg tcaccaccct
    17161 ctatacgagt agttgcttca cgattgtaaa ccaatggaac ttttccacca tattctgggt
    17221 gatgggtgaa gatatattta ccatacaagg tttcacggtt ccgtgtttct gaatacatgt
    17281 ggttaagaga aacagcatta ccaatcgtag caaatggatc ccgtgtgaag taaaggtttg
    17341 gcattgggtc tattgcaaat gggtaagagg attcaaccaa atctgtcaaa cctttttctt
    17401 cagaagggat ttctggcaat tctgcctttt gaacaccagc catcgttttc tcaaccagtt
    17461 cttgattatc ttcaatagac atcaacaact tgcgaattgc cttcttagtc gcccgaccac
    17521 gaatgttagc ttcttcgaga tattcatcaa taaattgttc acgaatttca ggcgtaacaa
    17581 gtgactcagc agctaatttt tccaagtaga gcacttcgac accttcatca cgaagagctt
    17641 gagcaaaagc atcatgctct ttctgtgcat cttctaagaa tggaatatca tcgaagagta
    17701 ggcgttctag gtagtcaggc atcaggtttt caatttcctt acctggtctg tgtaacataa
    17761 cttttttcag cttaccaatt tctgaaaaaa catgaattgg atggtttgac atgatctgtc
    17821 ctccttgtag atttatacat gatgggaaac gaggaggacc gtacgctttc ctgcctctca
    17881 tttcctcttt acatccatag tttaacagag caaaaaaaca aaaacttgaa aacgctcaca
    17941 tttattttga gaaattcttc acatttttaa ccttatttat aaataattat tgattatatc
    18001 gcctatattc tgcataattc tctccgttat atcattatat gaatttttat ttttttataa
    18061 aaaaacagaa acttcaatga gtttctgtca aattttctaa gaaataatca atatctaaat
    18121 aagttaactg tttatggcta taagcaattt taccatcctg cttcagttgc ttcaaaacat
    18181 ggctaaccgt ttcccgtgtc gtagctgcta aacgcgaaat ctcttgaata tgaatttcaa
    18241 atggcaaggt agcaaactga tcgcgctggc acatatccca ataaagaaga gccaaggctt
    18301 gaacgactcg atctgatgcc ttggaacgca tcgcatttcg caagcgcaac tcttgaaaac
    18361 gaagcacttt ggataatttt tgacagatat aagccatttg actcggattt atcttcgaca
    18421 aggtttcaaa caagaccatc ggtacaataa aatactctag gtccgttatg gcaatggcag
    18481 tataatgata aggtttgtcc tgaaacatat ctccaaaagg aaaggcaccg ccctgccgaa
    18541 tatagtccaa atacgtaaaa ctatccgtct catcatattg ctcaatccga gcatagccct
    18601 tatacaatac aaatagataa tctctaggat cctctgcgta aaaaaagatt tgccccttag
    18661 gaatctttcg aaaacgaata tgcttagcta attgatcaaa gctatcacgt gtcaaacgtt
    18721 caaaagttgg atgtgccctt agataatcat attgttcgtt gcttatcatc aaaactcctt
    18781 tctagctaaa gtatccttct atctatttta acatatatta acgttctatg ctaatcatta
    18841 ctgaaaaatt cataaaacag tgaggaagct gggcaaaaag cccagcaccg cttctcaaag
    18901 ttagtgtcaa catctcagcg cagtggttga ttgggttta
//
LOCUS       DASFQD010000037        18906 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.037, whole genome shotgun sequence.
ACCESSION   DASFQD010000037 DASFQD010000000
VERSION     DASFQD010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 18906)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18906)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18906
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.037"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..627)
                     /gene="upp"
                     /locus_tag="U1021_000966"
     CDS             complement(<1..627)
                     /gene="upp"
                     /locus_tag="U1021_000966"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002883819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEM4711518.1"
                     /translation="MGKFQVISHPLIQHKLSILRRTSTSTKDFRELVNEIAMLMGYEV
                     LRDLPLEDVEIETPITKTVQKQIAGKKLAIVPILRAGVGMVDGLLSLVPAAKVGHIGM
                     YRDEETLQPVEYLVKLPEDIDQRHIFVVDPMLATGGSAILAVDSLKKRGASNIKFVAL
                     VSAPEGVKALQEAHPDIDIYTAALDEKLNEKGYIVPGLGDAGDRLFGTK"
     gene            complement(710..2326)
                     /locus_tag="U1021_000967"
     CDS             complement(710..2326)
                     /locus_tag="U1021_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HEM4711519.1"
                     /translation="MSEIQKTDWWKKSVIYQIYPRSFQDSNGDGIGDIRGIISRLDYL
                     HELGIDAIWLSPVYQSPMDDNGYDISDYQGIAPEFGTMEDMEELIAEGHKRNIKIIMD
                     LVLNHTSDEHFWFQEALKGPDNPYYDYYVWADEPNELRSTFSGSAWEYVPHLNKYYLH
                     QFSVKQPDLNWKNPALKQEIWDMINFWIEKGVGGFRLDVIDLIGKEPEKLITADGPTL
                     HPLIQELNEKTFGAYDLVTVGETWSANPENAQLYSHPDRKEFSMIFQFEHVGLDQQEG
                     KEKWDLAPLDPARLHKVLSKWQTELVGKGWNSLFWNNHDLPRAISRFGDDRPAFRELS
                     GKMLAIYLHFMSGTPYIYQGEEIGMINTPITDISQADDIETRRMYAERIENGFTKEEL
                     ITSINAKGRDNARRPIQWTGAKGAGFSTGQAWLALGDTVKDINVEKALADKQSLFYTY
                     QKLIALRKEYPCMSEGKYEVMETGNSLVMAYRKYDEQDDFIILVNFTSDEQAFDVSSE
                     GYSMFMHNYENGVNLDENVLRPFEAIVFKK"
     gene            complement(2399..3847)
                     /gene="gtfA"
                     /locus_tag="U1021_000968"
     CDS             complement(2399..3847)
                     /gene="gtfA"
                     /locus_tag="U1021_000968"
                     /EC_number="2.4.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose phosphorylase"
                     /protein_id="HEM4711520.1"
                     /translation="MKIKNQAMLITYSDSLGKNLKDLKKVLEGPLKDVVGGIHILPFF
                     PSSGDRGFAPMDYTKVDPAFGDWSDIEALSKDYYLMFDFMINHISAKSPYFLDFLEKK
                     DESAYADLFIRYKNFWPNGEPTQEDVDLIYKRKPRAPYRIATFADGSEEKVWCTFDEQ
                     QIDLDVTTETTRRFIQENLEQLAEHGASIIRLDAFAYANKKLGTNCFFVEPDIWEMLH
                     FPRQLLAPKDVEILPEIHEHYTIQQKIAEQDYYVYDFALPMLVLHALYSGHVNRLVHW
                     MEICPRKQFTTLDTHDGIGVVDVKDLLTDEETEETREALYAQGANVKKIYSTEAYNNL
                     DIYQINCTYYSALGNNDQAYLLARVLQCFAPGIPQIYYVGLLAGENDIELLESSKEGR
                     NINRHYYDLEEIEQEVQRPVVQSLFKLLKFRNTSPAFDGEFSVKMLDETSMEIFWNNQ
                     DAGVSARLTANLKEKSFEIVEIEEGKITTIEL"
     gene            complement(3917..4747)
                     /locus_tag="U1021_000969"
     CDS             complement(3917..4747)
                     /locus_tag="U1021_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM4711521.1"
                     /translation="MNTQKQKNWWVYLVLFSGILFMFIPLLVTIISSFKPTKEITSNF
                     FGLPENFTLNNYERLFNDGIVQYFGNSALITIVAVGLILLVIPMAAFAVARQMKRQTV
                     FNFIYFFLIIGIFVPFQVIMLPMTKLMSSLGLNNIVGLIILYLTYAVPQALFLYVGYI
                     KTIVPEEMDEAAAIDGCDKFTMYWKIIFPLMKPMHATVLIINALWVWNDFLLPLLVLN
                     RDQSMWTLPLFQYNYQGMYFSDYGPSFASYVVGIIPILLVYLIFQKHIISGMTSGSVK
                     "
     gene            complement(4758..5630)
                     /locus_tag="U1021_000970"
     CDS             complement(4758..5630)
                     /locus_tag="U1021_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM4711522.1"
                     /translation="MNQKGFIAKYWPYLFVAIPIGLQLIFFFYPLLTGIYYSLTDWNG
                     LTSDFSLIGVQNYLDILKNPDFYTSMTFTIIFTIGLVIGEIVIGIWLASLLNRKIKAV
                     GFFRTWYFFPAVLSTVTLGLIFVQLFNYGFTQIGEILHIDWLMENLLVQENTVIPAVL
                     FVALWQGLAMPVIIFLSGLQSIPEDVKEAAAIDGATRSQQFFNIELPFLLPSISMVFI
                     LAMKSGLTAFDLIFALTSGGPDGKTESLGLLVYNYAFVDNKFSYANALAVVLFIFIIV
                     ISLIQMRISKKFEI"
     gene            complement(5768..7003)
                     /locus_tag="U1021_000971"
     CDS             complement(5768..7003)
                     /locus_tag="U1021_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEM4711523.1"
                     /translation="MKMKTFLKCASVCAFASFLVACGNASSSDKVEIEYFSQKPEMQA
                     TLQEIIDDFEKENPTIDVKFSNVPDAGTVLKTRMANNEAPDVINIYPQNADFKAYAAD
                     GRFLEIGDDAGLSHLKDGAVTPYLVNEKNYTLPLTANAYGIYYNKDKFKELGLEVPTT
                     YAEFVALVDKIKADGSAAPFALSLNDAWSLNGYHQLAWVTVAGGFDGAEDILIRSAKG
                     AIQDDATTKAVLERLQLLKDNGQKGATGALYADAVAAFAAGDALMLPQGTWAATAVNQ
                     QEPEFEYGMFTFPGDKEGGDYTIGAADLALSISADTEHPEESKKFLEYLSRPEVIQKY
                     YDVDGSPTSVEGVDTEGKFEETAGVTQYAFTDKHVVWLQSEWESEDEFWNITVEMVKN
                     PNSAELVKKLNAFFDPMKK"
     gene            complement(7017..9191)
                     /locus_tag="U1021_000972"
     CDS             complement(7017..9191)
                     /locus_tag="U1021_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HEM4711524.1"
                     /translation="MNVIEIYNEKQIFHLKTREFSYIIQVLETGDLVHRYFGKKIEKF
                     SDGNKITYLDRSFSPSPITGDRTYSLDVLPLEYSSNGLGDFRTSALDVRNEFGVTLDL
                     KYKEYRLYKGKKELRGLPASFGNQEEVESLEIDLYDQLTDVTVTLQYSVFEEASYLAR
                     SATIQTGKYPCKLEKVLSATLDFPHQDFIVHSLAGRYAYEKEWTQTPLTKGQYSIGSI
                     RGASSHSRTPFLALASPDASEDKGDVYAAHLVYSGNFTAFVETTAMETSRLGLGLESH
                     YFSWQLDKDDRFQTPEVLLSYTDKGFTGMTQNSHHFITKHLIRSSFVNKPRPILINNW
                     EATYFEFTEEKILQLAQVASRAGIELFVLDDGWFGKRNNDESSLGDWKVNLDKLPNGL
                     NGLADRINELGMKFGLWFEPEMISIDSDLYREHPDWAIRTEGRLPIYSREQLVLDLTK
                     QEVCDYIIDSVSSILESANISYVKWDMNRNITNIPEGLANDQRFEFHHRYMLGLYRVL
                     DHLTKRFPDILFESCAGGGGRNDLGIMYYMPQAWASDDTDAIERLSIQEGTSLIYPPS
                     SIGAHVSAVPNHQVGRITPLATRGNVAMMGGAFGYELDLTKLSEKELDEISQQIETYH
                     SIRETIQFGQLYRLKKTSNTWAANYVGQDKNQVVFTFVKILAKPEAPLLYVRLKGLDP
                     AALYECPQLGETFYGDELMNIGLTMPHVQNDYFSVQYIFNKI"
     gene            9297..10136
                     /locus_tag="U1021_000973"
     CDS             9297..10136
                     /locus_tag="U1021_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM4711525.1"
                     /translation="MNILNIYNELDSHNFDLNVDHYGAEQCDKGYSFGPTIRDNFVLH
                     FITKGKGKILVDGKTSYLAAGDLFILPKDVSIFYQADDIDPWTYIWVGFSGSRAKDLL
                     NQSQLLENYYLHSNLESPILGYMHQINHVQMHPIPSITELVLIGYLNQLLAALIEEFP
                     SETLIKPETQTKHYVQQAIKMIHNHYAHPIKVSEIADFLALSRSYLYKIFKQETGYSI
                     KDYILQVKMNRSCQLLEDASRSITEIAYSVGYQDPLTFSAAFKNYFHMSPTDFRNTQK
                     NKD"
     gene            complement(10168..11328)
                     /locus_tag="U1021_000974"
     CDS             complement(10168..11328)
                     /locus_tag="U1021_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM4711526.1"
                     /translation="MTQYNFIDSPNRLSQHAEKWRKVETDKELLPLWIADMDFEPLPE
                     IRQVIRDYADHHVFGYPYASDSLYQSIIDWEDRQHGYKINRESILLIEGVVPALSVAI
                     QSLTEEGDAVLINTPVYPPFARTVKLNNRQLVTNSLVDVDGVFRIDFDQLEKDIVENQ
                     VKLYIFCNPHNPGGRVWTREEVLAIGRLCQKHGVILVSDEIHQDLTLYGHKHYSFNTV
                     DESFKEFSIILSSATKTFNIAGTKNSFAIIENPSIRKTFAKRQLINNQHEIPTIGLLT
                     TEAAFTYGDEWLKELKVILERNIDFVEEYLITHTRIKVMKPQGTYLIWLDFSAYELEH
                     AELFDILHCKAKLILNDGLTFGKEGKYHARLNVAVPFNMIEEACQRLGKVFG"
     gene            complement(11332..12423)
                     /locus_tag="U1021_000975"
     CDS             complement(11332..12423)
                     /locus_tag="U1021_000975"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HEM4711527.1"
                     /translation="MTDYKIDTILAHTGINSDERTGALISPIHLSTTYQHPEFGQSTG
                     YDYTRTKNPTRASLETTLAAIEKADYALATSSGMAALVLLFNGFPVGSQVVAARDLYG
                     GSFRWFNEQESIGRFQFTYANTEEELIAAITEETDYVYLETPTNPLMVEFDIAKVSAI
                     AHAKGAKVIVDNTFYSPIYQNPLVLGADVVLHSATKYLSGHNDVLAGALMTNDQALYD
                     KLFYDQNTSGPTLSPLDSYLLMRGLKTLSLRMERATQNAQKIVAYLEKSPAVKQVYYT
                     GKGGMISVKVVDESRIPHILNTLKVFTFAESLGGVESLITYPATQTHADIPAETRHSY
                     GLTDDLLRLSIGIEDAEDLIVDLKTALEG"
     gene            12626..12892
                     /locus_tag="U1021_000976"
     CDS             12626..12892
                     /locus_tag="U1021_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711528.1"
                     /translation="MKFQFNKHFYRYSAFYSMIFWTCFFLSDILLDPSQTPAWYSLLA
                     SMIILIHAIRTFFFKEEKELTRMGYIFYIGLIVVIIYLKFILGK"
     gene            12906..13160
                     /locus_tag="U1021_000977"
     CDS             12906..13160
                     /locus_tag="U1021_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711529.1"
                     /translation="MSKKFNKAFYRTWEFYLSLACILQVISAAVNGPFWFIHFLKLGL
                     GLYAGYLAFFKSRSWIKKTWQIYLTIGLIASWTIISFFVL"
     gene            13170..13421
                     /locus_tag="U1021_000978"
     CDS             13170..13421
                     /locus_tag="U1021_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711530.1"
                     /translation="MFKEFNKEFYRSFNFYLMILLLLGSIGEWLDKGPTLWLGLLLFA
                     SVGTARSAFWSKEWMLRANWQIYLCIAFLLVGAWVEFFI"
     gene            13501..14250
                     /locus_tag="U1021_000979"
     CDS             13501..14250
                     /locus_tag="U1021_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002929756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HEM4711531.1"
                     /translation="MQKIELLDGERIDQLFSTDVQIIQNREVFSYSIDSVLLSRFPKM
                     PAQKGLIVDLCSGNGAVGLFASTRTKAQIIQVELQERLADMNRRSIALNGLEEQVSII
                     NDDLANLPQYDLRSKVDLMLCNPPYFKVDKESNLNESEHYLLARHEIATNLDSICQVA
                     QQVLKSNGRLAMVHRPDRFLDILDTLRTYKLAPKRIQFVYPKSSKEANMLLIEAIKDG
                     SVDGLHILPPLVVHEENGDYTPAIREIYYGK"
     gene            14240..14509
                     /locus_tag="U1021_000980"
     CDS             14240..14509
                     /locus_tag="U1021_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEM4711532.1"
                     /translation="MENKAYFYVLECADGSLYTGYTTDVEKRLATHNRGKGAKYTRGR
                     LPVSLLYQEAFASKQEAMSAEALFKKRSRQSKLDYIAERKQENAK"
     gene            14499..14867
                     /locus_tag="U1021_000981"
     CDS             14499..14867
                     /locus_tag="U1021_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two pore domain potassium channel family
                     protein"
                     /protein_id="HEM4711533.1"
                     /translation="MQNKKHIHRLRIIWHILRVTGFATFLTSFFSFIFLAAGLLLWLE
                     PDFTSYGDSLWYSFVTATTVGYGDMLVTTAFGRIISIILAIYGILFLGSLSGLVVSYY
                     TEVSKHYSLAIKQDKQKTGS"
     gene            complement(14879..15490)
                     /locus_tag="U1021_000982"
     CDS             complement(14879..15490)
                     /locus_tag="U1021_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEM4711534.1"
                     /translation="MANLLIVKAHPLDAQKSYALRALEEFQTRYASLHPEDRIEIVDV
                     FEDQIPALDKPLLEAMGAAKRGEAISPEQAEQLGRYNALTQQFLAADKIVVVNPLWNL
                     NVPSQLVSWINTINVAGLTFKYGPEGSIGLVKGKKLLHIQSNGGVYAGQDPAAQYIKS
                     IFEFLGFEDIHQVFIEGQSADPSQSQAIFEEAIAKIDQILESY"
     gene            complement(15622..16029)
                     /locus_tag="U1021_000983"
     CDS             complement(15622..16029)
                     /locus_tag="U1021_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4711535.1"
                     /translation="MITYKQNPQLDFQAVLGIYDSVGWTNYTDRLTMLQKVLKHSLFV
                     LAAFDGDRLVGLLRAVGDGYSIMFIQDILVLPAYQRQGIGRQLLEQAVTHFPGIYQLH
                     LLTDNTEKTRSFYEAIGFTAVDSLDCVAYTYLK"
     gene            complement(16140..16739)
                     /locus_tag="U1021_000984"
     CDS             complement(16140..16739)
                     /locus_tag="U1021_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1648 domain-containing protein"
                     /protein_id="HEM4711536.1"
                     /translation="MKKIDIKTLLATSSIFLLIAVLMICYYKALPNTMVTHFGVNGES
                     NGSMAKYMMILTPLSFFCVHLFICVLYDVRGIGKTPVIRVVKWLFPLLALIIQVALLR
                     FNLGGELDYQRLVIGLLAVYYMVIGNYLPKEELDSKTNEIERKGRKYVGYFSIIGGLL
                     LLVSLLGSPALSILVMILVGISVVSLSIYYAYLHFKAAS"
     gene            complement(16726..17004)
                     /locus_tag="U1021_000985"
     CDS             complement(16726..17004)
                     /locus_tag="U1021_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM4711537.1"
                     /translation="MGLSETLKAISAPIRRQILDGLKSGPKSAGEIVEQFQLTGATVS
                     HHLSTLKKAGLILEEKQKNFIYYRLNYTVFEEVLVWIASFGGQQDEEN"
     gene            complement(17149..18729)
                     /locus_tag="U1021_000986"
     CDS             complement(17149..18729)
                     /locus_tag="U1021_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000673092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4711538.1"
                     /translation="MKFTDLQLSEDILLAVEKAGFETPSPIQEQTIPLALEGKDVIGQ
                     AQTGTGKTAAFGLPTLNKIDTNNQAIQALIIAPTRELAVQSQEELFKFGREKGVKVRS
                     VYGGSSIEKQIKALRSGAHIVVGTPGRLLDLIKRKALKLDGVETLILDEADEMLNMGF
                     LDDIEAIIERVPESRQTLLFSATMPEPIKRIGVKFMKEPEHVKIAAKELTNVNVDQYY
                     LRVKEHEKFDTMTRLMDVDQPELSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQN
                     KRLRVIRDFKNDQIDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAG
                     QSGQSITFVSPNEMGYLAIIEELTKKRMKGLKPATAEEAFEAKKKVALKKIEREMADE
                     TIRSNFDKFKKDAIQLAAEFTPEELALYVLTLTVQDPESLPEVEIAREKPLPFKFAPG
                     QAKGKGGRGGRDRDRGGRRDGDRNRDRGGRRGDRNDRNRRDDKFKRDNRRQDNKKPHQ
                     RTSSEKKTGFVIRNKGER"
BASE COUNT         5495 a         4079 c         3621 g         5711 t
ORIGIN      
        1 ttttgtaccg aacaagcggt cacctgcatc tcccaaacct ggtacgatgt agcctttttc
       61 attgagtttt tcatccaagg ctgccgtata gatatcaata tctggatgtg cttcttgaag
      121 agcttttaca ccttctggag ctgaaacaag agcaacaaat ttgatatttg aagcaccacg
      181 ttttttcaat gaatccactg caaggatggc tgaaccacct gtagcaagca ttgggtcaac
      241 tacaaaaata tgacgttgat caatatcttc tggtaatttc acaagatact caacgggttg
      301 aagggtttct tcatcgcggt acataccgat gtgaccaact ttagctgctg gtaccaagct
      361 tagcaaacca tcaaccatac caacacctgc acgaagaatt ggtacgatag ctaatttttt
      421 acctgcaatt tgtttctgaa ctgttttagt gattggcgtt tcaatctcca catcttcaag
      481 tggcaagtca cgcaaaactt cgtaacccat cagcatcgcg atttcattaa ccaactcacg
      541 aaaatccttt gttgaagtag atgtacgacg aaggatagac aacttatgct gaatgagtgg
      601 gtgtgaaatg acttggaatt tacccatgat gataaaacct ctcttttttg ttttttctat
      661 tttaccaaaa attcatgaaa aaagcatggg aaaagaaaaa ctgagtaact tattttttaa
      721 aaactatcgc ctcgaaaggt ctcagaacat tctcatccaa attgacacca ttttcgtaat
      781 tatgcataaa catggaatac ccttcacttg atacatcgaa ggcttgctca tcacttgtga
      841 aatttaccag aatgatgaaa tcatcctgtt catcatattt acggtaggcc atcaccaagc
      901 tatttccagt ctccatcact tcatattttc cttcagacat acaaggatac tctttccgaa
      961 gagcaattaa tttttgatag gtatagaaaa gcgattgttt gtctgcaagt gctttttcaa
     1021 cgttgatgtc tttgacagta tctcccaaag ccagccaggc ttgacctgta ctgaagccgg
     1081 ctccttttgc tcctgtccat tgtattggac gacgagcatt atcacgacct ttggcattta
     1141 tagaagtaat caattcctcc ttggtgaagc cattttcaat ccgttccgca tacatgcgac
     1201 gtgtttcaat atcgtccgct tggctaatat cagtaattgg tgtgttaatc ataccaattt
     1261 cctcaccttg gtagatataa ggtgtccctg acataaaatg aagataaata gctaacattt
     1321 taccacttag ttcacgaaat gcaggtcgat catcaccgaa gcgagaaatg gcacgaggta
     1381 aatcgtggtt attccagaaa agcgagttcc agcctttacc aaccagttca gtctgccatt
     1441 tggatagaac cttatgcaaa cgtgctggat caagcggtgc caaatcccac ttttctttcc
     1501 cttcctgctg atcaagtccg acatgttcaa attggaaaat catcgaaaat tcttttcgat
     1561 caggatgcga atataactga gcattttctg gattggcact ccaggtttcc ccaacagtca
     1621 ctaagtcgta agcaccaaag gttttctcat ttaattcctg aataagagga tggagagttg
     1681 gtccatcggc tgtaattaat ttttctggct cttttccaat caaatcaatt acatctaacc
     1741 tgaaaccgcc gacacctttt tcaatccaaa aattgatcat atcccagatt tcttgtttca
     1801 gagcaggatt tttccagttc agatctggtt gcttaacaga gaattggtgg aggtagtatt
     1861 tgttcagatg tggaacgtac tcccaagcag agcctgagaa ggtcgagcgt aattcattcg
     1921 gctcatcagc ccaaacataa taatcataat agggattatc tggtcctttg agggcttctt
     1981 gaaaccagaa atgttcatcc gaggtatgat tgagaactaa atccatgatt attttgatgt
     2041 tgcgcttatg gccttctgca atcagctctt ccatatcttc catggtccca aattctggag
     2101 caattccttg gtaatcactg atgtcgtaac cattgtcatc cataggggac tgatagactg
     2161 gactgagcca aatagcatca attcctagct cgtgaagata atctaatcgg ctgataatcc
     2221 ctcgaatatc tccaattcca tctccatttg aatcttgaaa actacgagga taaatttggt
     2281 aaatgacgga cttcttccac caatctgttt tttgtatttc tgacatttga ttaatccttt
     2341 ctgtgcaatc ttatttacgc aagaaaaagg ggaatccccc tatttctata taatcatatt
     2401 ataactcaat tgtggtaatt tttccctctt caatttcaac aatttcaaag gatttttctt
     2461 ttaggtttgc tgttagacgg gcagacaccc ccgcatcttg attattccag aaaatttcca
     2521 tacttgtttc atccagcatc ttaacagaga actctccgtc gaaagctgga cttgtattgc
     2581 ggaatttaag gagtttgaac aaggattgta caactggccg ttgcacttcc tgctcaattt
     2641 cttccaaatc atagtaatgg cgattgatat tgcggccttc cttgcttgat tccaaaagct
     2701 caatatcatt ttcgcctgct agtaaaccaa cgtagtaaat ctgtggaata cctggtgcaa
     2761 aacattgaag aacacgcgcc aacagataag cttgatcgtt attgccaagg gcagaataat
     2821 aagtacagtt aatctgataa atatccaaat tattataggc ttctgtacta taaattttct
     2881 tgacattggc accttgtgca tacaaggcct cacgcgtttc ctctgtctcc tcatccgtca
     2941 gcaaatcctt aacatccaca acaccgattc catcatgtgt atcaagagtt gtaaattgct
     3001 tacgagggca aatctccatc caatgcacca ggcgattgac atgaccagaa tacaaagcgt
     3061 ggagaaccag cattggcaag gcaaagtcat aaacataata atcttgctcg gcaattttct
     3121 gctgaatggt atagtgttca tgaatttctg gtaagatttc cacatctttt ggcgccaata
     3181 actgacgtgg aaaatgtagc atttcccaga tatcaggctc cacaaagaaa caattggttc
     3241 cgagtttttt attggcataa gcaaaggcat ccaaacgaat gatcgaagca ccatgttctg
     3301 ccaattgttc cagattttct tggatgaaac gacgggttgt ctccgttgtc acatctaagt
     3361 caatctgttg ctcatcaaag gtacaccaca ccttctcttc actaccatca gcaaatgttg
     3421 caattcgata tggagcacgg ggtttacgct tatagatcaa atcaacatct tcttgcgttg
     3481 gctcaccatt tggccaaaag tttttataac gaataaacaa atccgcataa gctgattcat
     3541 ctttcttttc aaggaaatca aggaaataag gagattttgc cgagatatga ttaatcataa
     3601 aatcgaacat cagatagtag tccttactca atgcttcaat atctgaccag tctccaaatg
     3661 cagggtctac ctttgtataa tccattggtg caaacccacg gtcacctgat gatgggaaga
     3721 atggtagaat gtgaatacct cccacaacat cctttaatgg tccctcaaga acttttttca
     3781 aatccttgag attcttgcct aaactatcag aataggtaat caacatagct tggtttttaa
     3841 ttttcatcga cattctcctt tgtaagcctt ttctttttta ttttttagaa aaggttgaac
     3901 aagtcaacct ttgtaattat ttgacagaac cacttgtcat acctgaaata atatgttttt
     3961 ggaagatgag gtagacaagt aggattggga taattcccac aacatatgaa gcaaatgatg
     4021 gtccataatc actgaaatac atgccttggt aattgtattg gaaaagaggt aacgtccaca
     4081 tgctttgatc acgattcaaa accaagagcg gtaagagaaa atcattccag acccagaggg
     4141 cattgataat caaaacggtt gcgtgcatgg gtttcatgag cgggaaaatg attttccagt
     4201 acatagtaaa tttatcacag ccatcaatag ctgcagcctc atccatttct tcaggaacaa
     4261 tggtcttaat ataaccgacg tagaggaaga gggcctgagg aactgcatag gtcaaatata
     4321 gaataatcaa accgacaata ttgttcaaac caaggcttga cattaatttg gtcattggga
     4381 gcataatcac ttggaaaggt acaaaaatcc caataatcaa gaaaaagtag ataaagttaa
     4441 acactgtctg gcgtttcatt tgacgggcta ctgcgaaagc tgccattgga ataacaagta
     4501 gaatcaagcc aacagctaca attgtaatca aggcagaatt gccaaaatat tgtacaatcc
     4561 catcattaaa caggcgttcg tagttattta aggtaaaatt ttcaggaaga ccaaagaagt
     4621 tgctcgtgat ttccttggtt ggtttgaatg aacttataat cgtcacaagt agcggaataa
     4681 acatgaagag aataccgctg aagagcacga gatagaccca ccaatttttc tgtttttgag
     4741 tattcatgtc tgtcctccta aatttcaaat ttcttcgaaa ttctcatctg aatcaatgag
     4801 atgacaataa tgaagatgaa gagtactaca gccaaagcat tggcataaga gaatttgttg
     4861 tctacaaagg catagttgta aacgagtaaa cccaaggatt ctgttttgcc gtctgggcca
     4921 ccacttgtca gtgcaaagat aaggtcaaat gctgtcaaac ctgacttcat tgccaagatg
     4981 aaaaccatac tgatagatgg taataagaat ggaagttcaa tattgaagaa ttgttgagag
     5041 cgtgttgcac catcgattgc agctgcttct ttcacatctt ctggaatact ttgtaaacca
     5101 gacaagaaga tgatgactgg catagccaac ccttgccaga gagcaacaaa gagtacggct
     5161 ggaattacag tattttcttg taccaataag ttttccatca accaatcgat atgaaggatt
     5221 tctccaatct gtgtaaaacc atagttgaac aattgaacaa aaatcaagcc taaagtgact
     5281 gtggatagca ctgctgggaa gaaataccat gttctaaaga aaccaaccgc cttaatctta
     5341 cgattgagga gactagccaa ccaaatccct ataacaattt ctccgatgac caaaccaatg
     5401 gtgaagataa tggtaaaagt catagacgta taaaaatcag gattcttcaa gatatctaga
     5461 tagttttgaa cgccaatcaa gctgaaatct gatgtcaatc cattccaatc cgtcagacta
     5521 taatagattc ccgttaataa gggatagaag aaaaagatta actgtagacc aattggtatg
     5581 gcaacaaata gatagggcca atatttggca ataaaacctt tttgattcat catgatactc
     5641 cttttttcta taatgtatag ttgcttaggg acagtttgaa tggagtggtt aggggggatt
     5701 caaactgacc ctaagcaact ataaagaaga gctaggctgt tctagccctc cttatagttt
     5761 tcttgaatta ttttttcatc ggatcaaaga atgcattcag ttttttcact aattctgctg
     5821 agtttggatt tttaaccatt tcaacagtga tattccagaa ctcatcttct gattcccatt
     5881 cagattgcaa ccaaactacg tgtttgtcag tgaaggcata ttgtgtcact ccagcagttt
     5941 cttcaaactt accttctgta tctacacctt caactgaagt tggtgagcca tctacatcat
     6001 agtatttctg gataacttct ggacgagaaa ggtattctag gaatttttta gactcttctg
     6061 ggtgctctgt atctgctgaa atagatagag caaggtcagc tgcaccgatg gtatagtcgc
     6121 caccttcttt atcgccaggg aaggtaaaca taccatattc aaattctggt tcttgttggt
     6181 ttacagctgt agctgcccat gtaccttgtg gaagcatgag agcatcacct gctgcaaagg
     6241 ctgccaccgc atctgcatag agcgcgcctg ttgccccttt ttgtccattg tctttcaaca
     6301 attgtaagcg ttctaaaact gcttttgttg tcgcatcatc ttgaatcgct ccctttgcac
     6361 tacgaatcag aatatcttct gcaccatcaa atccacccgc aacagttacc caagctaact
     6421 gatggtagcc gttcaatgac caagcatcgt tcaatgaaag agcaaacggt gctgcactgc
     6481 catcagcctt gattttgtct accaaagcca caaattctgc ataggtagtt ggaacttcga
     6541 gccccaattc tttgaactta tccttattat agtaaatacc ataggcattt gctgtcaaag
     6601 gaagggtgta atttttttca ttaacaagat atggcgttac agcaccatct tttagatgac
     6661 tgagacctgc atcatctcca atttctagga aacgaccatc cgctgcgtat gctttgaagt
     6721 ccgcattttg tggataaatg ttgatgacat ctggcgcttc gttatttgcc atacgggttt
     6781 tcagaacagt tcctgcatct ggtacatttg aaaatttaac atcaatcgta ggattttctt
     6841 tttcgaaatc atcaataatt tcctgaagag tagcctgcat ttcaggtttt tgtgagaaat
     6901 attctatttc taccttatcg ctactacttg cattcccaca agcaaccaag aagctggcaa
     6961 aggcacaaac tgacgcacat tttaaaaatg ttttcatttt catatataaa atcctcctag
     7021 attttgttaa aaatatattg tacactaaaa taatcatttt gaacatgggg catggtgagt
     7081 ccaatgttca tcaattcatc cccgtagaaa gtttccccta attgagggca ttcatatagg
     7141 gcagctgggt ctagcccctt caaccgaaca taaagcaaag gcgcttctgg cttggcaaga
     7201 atttttacaa atgtaaagac cacttgattc ttatcttgac caacataatt ggcagcccag
     7261 gtattgctcg tctttttcag acggtagagc tgaccgaatt ggatagtttc acgaatggag
     7321 tgataggttt cgatttgctg actgatttca tccaattcct tttccgaaag tttcgttaaa
     7381 tccagctcgt aaccaaatgc tcctcccatc attgccacat tgcctcgtgt agcaagaggt
     7441 gtgatccgac caacctgatg gttcggaacg gcagaaacat gtgcaccaat tgaggaaggg
     7501 ggataaatca aactagtacc ttcttgaata gataagcgct caatcgcatc tgtatcatca
     7561 cttgcccaag cttgtggcat gtaatacatg attcccaaat cattacgacc tccaccgcct
     7621 gcacaggatt cgaaaagaat atccgggaac cgctttgtga ggtggtctaa tacacggtag
     7681 agacctagca tgtaacgatg gtggaactca aagcgctggt catttgctaa accttcaggg
     7741 atattggtga tattacggtt catatcccat tttacataag aaatattggc tgattctaat
     7801 atggaagaga cgctatcaat gatgtagtca cagacttcct gcttggtcaa atccaaaact
     7861 aattgttctc ggctgtagat tggtaagcgt ccttctgtgc gaattgccca atcaggatgc
     7921 tcacgataaa gatcgctatc aatagaaatc atctctggtt caaaccacag tccaaatttc
     7981 atgccaagct catttattcg gtctgctaaa ccattcaaac catttggcaa cttatccaaa
     8041 ttgactttcc aatcgcccaa tgaactttca tcattgtttc gtttaccaaa ccaaccatca
     8101 tccagaacaa acaattcaat accagctcga cttgcaacct gagctaactg taaaatcttt
     8161 tcttctgtaa attcaaaata ggttgcttcc cagttgttga ttaaaatggg ccttggtttg
     8221 tttacaaacg atgatcgaat gaggtgtttt gtgataaagt gatgactatt ttgtgtcata
     8281 ccagtaaatc ctttatcagt gtatgataag agaacttctg gagtttgaaa ccggtcatcc
     8341 ttatccaatt gccatgagaa atagtgactt tccaatccta gtcccaatcg actggtttcc
     8401 atggctgtcg tttcgacaaa tgctgtaaag ttgccgctat agacaaggtg ggctgcataa
     8461 acatcgccct tgtcctcact tgcatcgggt gaggctagtg ctaagaaggg tgttcttgag
     8521 tgacttgaag cacctcgaat gctaccaatc gaatactgac cttttgtcaa tggggtctgt
     8581 gtccactctt tttcataagc ataacgtcct gccaagctgt gaacaatgaa atcttgatgt
     8641 ggaaaatcaa gcgttgcaga caagaccttc tctagtttgc atggatattt gccagtttga
     8701 attgtagctg accgtgcgag ataggaagct tcttcaaaaa cagaatactg aagtgttacg
     8761 gtaacatctg tcaactgatc gtaaagatca atttcaagac tctctacctc ttcttgattt
     8821 ccaaaacttg ctggtaatcc cctcagttct tttttcccct tgtataatcg atactctttg
     8881 tattttaggt caagagtgac tccaaattcg ttccgaacat ctaatgctga ggttctaaaa
     8941 tctcccagac cattgctgga atattcgagt gggaggacat ccaatgagta tgtcctatcc
     9001 ccagtaattg gactcggaga aaacgatcga tctaaatatg ttattttgtt tccatcgcta
     9061 aatttttcga tttttttccc aaaataacga tgaaccagat cgcctgtttc caacacttgg
     9121 atgatataag agaattctct tgttttcagg tgaaaaatct gtttttcatt ataaatctca
     9181 atcacattca tctctcccat ctcttcttta tgctattatt ttacaaaatg aaaacgcttt
     9241 atttaatggt cttttgtatt taaaacatgt tataatgttt cctaaggagg attgaaatga
     9301 atattctgaa tatctataac gagcttgata gtcacaactt tgacctaaat gtagaccatt
     9361 acggtgccga acaatgtgac aagggctatt ccttcggtcc tactatccgt gataattttg
     9421 tcctgcattt tattacaaaa ggaaaaggga aaattcttgt tgacggaaaa acaagctacc
     9481 ttgctgcagg cgatttgttt attcttccaa aggatgtttc cattttctat caagctgatg
     9541 atatagaccc gtggacctat atatgggttg gttttagtgg ttcacgagca aaagacctac
     9601 ttaatcaaag tcaactgcta gaaaactact acctccactc caatctagag tcaccaattc
     9661 taggctacat gcatcagatt aaccatgttc agatgcatcc catcccctct atcacagaat
     9721 tggtcttaat tggctacctc aaccaactct tagcagcact catcgaggaa tttcccagtg
     9781 aaacattaat taagcctgaa acacaaacca agcactatgt tcagcaagcc atcaagatga
     9841 tccataacca ctatgcccat ccaattaaag tttctgaaat agcagatttt ctagctttaa
     9901 gccgaagcta tctctataaa atttttaagc aggaaactgg ctattctatc aaagattata
     9961 ttttacaagt aaaaatgaat cgttcttgtc aactattaga agatgcttct cggagtatca
    10021 ctgaaatcgc ctattctgtc ggataccaag accctctcac cttcagtgcg gccttcaaaa
    10081 actatttcca tatgagccca acagatttta gaaatacaca aaaaaataag gattaggtga
    10141 ttttactcac acctagtcct tatttcttta tccaaaaacc ttaccaagtc gctgacaagc
    10201 ttcttcaatc atgttgaatg gtactgctac attcagacgt gcatgatact taccttcctt
    10261 accaaaggtc aaaccatcat tcaaaatcaa cttcgcttta caatgaagaa tatcaaagag
    10321 ctccgcatgc tctaactcat aagcagaaaa atcaagccag atgaggtagg ttccctgggg
    10381 cttcatgacc ttgatccttg tatgggttat caaatactcc tcaacaaagt ctatatttct
    10441 ctccaaaata accttcaact ccttcaacca ctcatctcca taagtgaaag cagcttctgt
    10501 ggttaacaag ccaatcgttg gaatctcgtg ctgattattt atcaattgac gcttagcgaa
    10561 agtcttgcgg atgcttggat tttcaatgat tgcaaagcta ttttttgtac cagcgatatt
    10621 gaaggtcttg gtcgcagatg ataagatgat tgaaaactct ttaaaacttt catccaccgt
    10681 gttaaaggaa taatgcttgt gaccatacaa ggtcaaatct tgatgtattt catctgagac
    10741 aaggataaca ccatgtttct gacaaagacg tccaatagcc aacacttcct ctcttgtcca
    10801 aactctacca cctgggttgt ggggattaca gaaaatatag agtttcactt gattctctac
    10861 aatgtccttt tcaagctggt caaaatcaat cctaaaaaca ccatccacat caactagtga
    10921 attggtgact agctgacgat tgtttaattt tacagtccgc gcaaagggtg gatagacagg
    10981 tgtattaatt aggactgcat ccccttcttc tgtcaaagat tgaatagcca cagataaggc
    11041 aggaacaact ccttcgatga gcaggatgga ctctctatta atcttgtagc catgctgtct
    11101 atcttcccag tcaataatag actgatagag gctgtcacta gcatagggat aaccaaaaac
    11161 gtgatgatct gcgtagtcac ggataacttg gcgaatttct ggtagaggct caaagtccat
    11221 atctgctatc cacaagggta agagttcttt atccgtctct acttttctcc atttttccgc
    11281 atgctgggat agacgattcg gactatctat aaaattatac tgtgtcatat cttatccctc
    11341 caaggctgtt tttaaatcta caatcaagtc ttccgcatcc tctataccaa tagacagacg
    11401 aagcaaatca tctgtcaaac cgtaagaatg acgggtttca gctggaatgt ctgcgtgggt
    11461 ctgagtggct ggataggtaa tcagactctc tactccaccc agactttcag caaaggtaaa
    11521 gactttcagg gtgttgagaa tatggggaat ccgactttca tctaccacct taaccgaaat
    11581 catcccacct tttcctgtgt agtaaacttg cttgactgct ggactcttct ccaaataggc
    11641 aacaattttc tgagcatttt gtgtcgcccg ctccattcga agcgagaggg ttttgagtcc
    11701 acgcatgagt aagtaagaat ccagtggaga tagggttgga cccgatgtat tttggtcata
    11761 aaagagctta tcatataggg cttgatcatt ggtcatcaaa gcgccagcta gtacatcatt
    11821 atgcccagat aggtacttgg ttgctgaatg taggacaaca tccgctccta gaacaagtgg
    11881 attttggtag atagggctgt aaaaagtgtt atcgacaatc accttagcac ctttggcatg
    11941 ggcgatagcc gaaaccttag cgatgtcaaa ctccaccatg agtgggttag tcggtgtctc
    12001 cagataaaca tagtctgtct cttcggtgat ggctgcaatc agctcctcct cggtgtttgc
    12061 ataggtaaat tgaaatctac cgatactctc ttgctcattg aaccagcgga aggaaccacc
    12121 gtacaaatca cgcgccgcta ccacttgact ccctacagga aaaccattaa aaagtaagac
    12181 cagagcagcc attcccgagc tcgttgctag ggcatagtcg gccttttcaa tagctgccaa
    12241 agtcgtctct agactggcac gtgtcggatt ttttgttctc gtgtagtcat aacctgtcga
    12301 ttgaccaaac tcagggtgtt gataggtcgt cgaaaggtgg ataggggaaa tcaaggcacc
    12361 tgttctctca tcgctattga tgcccgtatg cgctaaaatc gtatcaatct tataatctgt
    12421 cataacatct actccaatct aacttacaat atagtctagc atgaaatagg agatttggtg
    12481 tgaaaaatat ccaaaaatac ttatagaaaa atagcaagct ttgctatagt ttttctttat
    12541 aacaataatc atactggatt taccaataaa tacttttaaa cctatacatt atttgatata
    12601 ataaaagaaa gagaggtgat ttgtcatgaa attccagttt aacaagcatt tctatcgtta
    12661 tagcgccttc tattctatga ttttttggac ttgttttttt ctgtcagaca tattgctaga
    12721 tccttcccaa acgcctgcat ggtatagcct attggcctct atgattattt taattcatgc
    12781 cattcgaacc tttttcttca aggaagaaaa agaactcact cgcatgggct acatcttcta
    12841 tatcggattg atcgtggtga ttatctatct gaaatttatt ttgggtaaat agaaaggagc
    12901 ttactatgtc taaaaaattc aataaagcat tctatcggac ctgggaattt tacttgtctc
    12961 ttgcctgtat cctacaagtg atttctgctg ctgtaaatgg accgttttgg tttatccatt
    13021 ttctcaagct tggactcgga ctttatgctg gttatctagc tttctttaag tcacgtagct
    13081 ggattaaaaa aacatggcaa atttatctga cgattggatt gattgctagt tggacaatca
    13141 tttccttctt tgtactgtga ggattttata tgtttaaaga atttaataaa gaattttatc
    13201 ggagttttaa cttttatttg atgatattgt tgttgcttgg tagcattgga gaatggttgg
    13261 acaaggggcc taccctctgg cttgggctct tgctctttgc ttctgtcggt acagcccgca
    13321 gtgccttttg gtctaaagaa tggatgttga gggcaaattg gcaaatctat ctctgcatcg
    13381 cattcttgct agttggggct tgggtagaat tttttattta aggattgagg gcgaagtatt
    13441 cgctctcttt ttgtttcaaa atatacagtg attttcattc aaagatggta taatatacct
    13501 atgcaaaaaa ttgagttatt agacggagag cggattgacc agctcttctc gacagatgtt
    13561 cagattattc aaaatcgaga ggtttttagc tactcgattg acagcgttct tctttcgcgg
    13621 tttccaaaaa tgcctgctca gaaggggctg attgtcgatc tttgtagcgg aaatggggcg
    13681 gtgggcctct ttgcctctac acgcaccaag gctcagatta ttcaggtcga gttgcaggag
    13741 cgactagctg atatgaaccg ccgttccatt gccctcaatg gtctggagga gcaggtttcg
    13801 attatcaatg acgacttggc aaacctgccc cagtatgatc tgcgctccaa ggttgatttg
    13861 atgctctgca atcctcccta tttcaaggta gataaagagt caaacctcaa tgaaagcgag
    13921 cattatcttc tagccagaca cgagattgcg accaacctag acagcatttg tcaggtggcc
    13981 caacaggtgc tcaaatccaa tggtcgcttg gccatggtcc acaggcccga ccgattttta
    14041 gatattttgg acacactaag aacctacaag ctggctccca aacgcatcca gtttgtctat
    14101 cccaagtcca gcaaggaggc caatatgttg ctgattgagg ctatcaagga cggctcggtg
    14161 gacggtctgc acatcctgcc acctctggtt gtccatgagg aaaacggcga ctatactcct
    14221 gccattcgtg agatttatta tggaaaataa ggcctacttt tatgtcttgg aatgtgccga
    14281 cgggagtctt tatactggct atacgactga tgtggagaag cggcttgcta cccataatcg
    14341 tgggaaaggg gccaagtaca cccgcggacg cttgcctgtc agcttgctct atcaagaagc
    14401 ctttgctagt aagcaggaag ccatgtctgc cgaggctttg tttaagaaac gcagtcggca
    14461 gagtaaatta gattatatcg cagaaagaaa acaagaaaat gcaaaataaa aaacatatcc
    14521 accgccttcg catcatttgg catatcttga gagtgactgg ttttgccact tttctcactt
    14581 cctttttcag ttttatcttt ctagcagctg gtttgctact ctggttggag cctgatttta
    14641 ccagctacgg tgatagttta tggtacagct ttgtaacggc gacgactgtt ggctatggag
    14701 atatgctggt caccactgct tttggacgga ttatcagcat tatcttagct atttacggca
    14761 ttctcttttt ggggagcctg tctggattag tcgtcagcta ctataccgag gtcagcaagc
    14821 attattcttt agcaatcaaa caggacaagc aaaaaactgg ctcttaggaa ccagtttttt
    14881 aatagctttc caaaatctga tcaattttag ctattgcctc ttcaaaaata gcctgagact
    14941 gacttggatc ggcagattgc ccttcgataa agacctgatg aatgtcttca aagcctaaaa
    15001 attcaaagat agacttgatg tactgagctg caggatcttg acctgcataa acaccaccat
    15061 tggactggat gtgcaacaat tttttgccct tgaccagacc gatagagccc tcaggtccat
    15121 acttgaatgt cagtcctgca acgttaatgg tattgatcca tgacactaat tgacttggca
    15181 cattgaggtt ccaaagggga ttgaccacga caatcttatc tgctgcaaga aattgttggg
    15241 tcaaggcatt gtagcggccc aactgctctg cttgttcagg gctgatagct tcgcctcttt
    15301 tagctgctcc catagcctct aacaagggct tatccaaagc tggtatttgg tcctcaaaga
    15361 catctactat ttcaatccga tcttctgggt gcaaactggc gtaccgtgtt tgaaactctt
    15421 ccaaagcccg caaggcgtag gacttttgtg catcaagtgg gtgggctttt acgattaata
    15481 gatttgccat tggttctctc ctttgttatc ctttattact aattattgat aaatatattc
    15541 tactcttttt gatttgaaat tcaaatcatt tgctcgaagc aaaaggctgg tctcccagcc
    15601 tctgcttttt agattgtttt attattttaa ataggtgtaa gcgacacagt ccaggctatc
    15661 aacggctgta aagccaattg cctcatagaa agaccgtgtt ttctcagtat tgtccgtcaa
    15721 gagatgaagc tgataaatac ccggaaagtg ggtaacggcc tgctccaaaa gctgacgccc
    15781 aattccttgt cgctgatagg cggggaggac caaaatatcc tgaataaaca tgatagaata
    15841 accgtcacca actgctcgca agagacccac tagacggtca ccgtcaaagg ccgcaagaac
    15901 aaacaggcta tgtttcaaga ccttctgtaa catggtaagc cggtcagtat aatttgtcca
    15961 accaactgaa tcatagattc caaggactgc ttgaaaatca agttgaggat tttgtttgta
    16021 agtaatcatg atgttctcct ttgtattatt tttagaatac aaaggcttta tctattgtca
    16081 aaacgcccat ggtctttcct cctgttttgc tacttctagt ataacaaaaa ccactccaat
    16141 tatgaagcgg ctttaaaatg cagataagca tagtagatgc taagacttac aacagaaata
    16201 ccaaccaaaa tcattacaag gatagatagg gctggtgaac ctaatagact aactagcagc
    16261 aataacccac caataattga gaaatagcca acatactttc ttccttttcg ttctatttcg
    16321 ttggtcttgc tgtccaattc ctccttgggt aaataatttc ctatcaccat ataatagaca
    16381 gccagcagtc caatgactaa cctctgataa tccagttctc ctcccaagtt aaaccggagc
    16441 aaagcaactt gaatgatgag agccagcagc ggaaaaagcc atttgaccac tcgaatgact
    16501 ggtgttttcc ctatccctct cacatcataa agtacacaaa tgaataggtg aacacaaaag
    16561 aatgatagcg gtgtcaaaat catcatatac ttggccatag agccatttga ctcaccattt
    16621 acgccaaaat gtgtcaccat ggtgtttggc aatgctttat agtaacaaat catcaataca
    16681 gcaatcagta ggaatatact agaagttgct aataatgttt ttatgtcaat tttcttcatc
    16741 ttgttgccct ccaaaacttg caatccaaac caagacttct tcaaagaccg tatagtttag
    16801 acgataataa ataaaatttt tctgcttttc ctccaaaatt aatccagctt ttttcaacgt
    16861 ggataaatga tgagatactg ttgctcctgt taattgaaat tgttctacaa tttccccagc
    16921 agacttcggc cccgacttaa gaccatctag aatttgccta cgaataggag cagaaattgc
    16981 cttcaaggtt tcagacaatc ccataataag cctccttgtc catctattta gaaatatttc
    17041 taaatagaat tatactctgt ttttattgtt tgtcaagaac tatttcgatt attttctaaa
    17101 tagatttcaa aaaaaacaga ccactcttta tggtctgtca aatccggctt atctctcccc
    17161 tttattgcgg ataacaaagc ctgttttctt ttcacttgat gtgcgttggt gtggtttttt
    17221 gttgtcctga cggcggttgt cgcgtttaaa cttgtcatcg cgacggttgc ggtcattacg
    17281 atcaccacgg cgtcctccgc gatctcggtt gcggtctcca tcacgacgac caccgcgatc
    17341 acggtcgcga ccaccacgtc cacccttgcc cttggcttga ccaggtgcaa acttgaatgg
    17401 cagtggtttt tctcgcgcaa tttctacctc tggcagactt tctggatcct gaacagtcaa
    17461 ggtcaataca taaagcgcta actcttcagg ggtaaattca gccgctaact gaatagcatc
    17521 tttcttgaac ttatcaaaat tgctacggat ggtttcatcc gccatttcac gctcaatctt
    17581 cttcaaagca actttcttct tggcttcaaa ggcctcttca gctgtcgctg gcttgagccc
    17641 cttcatacgc ttcttggtca actcttcgat gatggccaag tagcccatct cgtttggcga
    17701 cacaaaggta atagactgac ctgattgacc cgcacgacct gtacgaccga tacggtgaac
    17761 ataactttct ggatcctgtg gaatatcgta gttatagaca tgcgttacac ctgaaatatc
    17821 caaaccacgg gccgcaacgt ccgtcgcaac aaggacatca atctggtcat ttttaaaatc
    17881 acggatgaca cggaggcgct tgttctggtc caaatctccg tggataccct ctgcacggaa
    17941 gccacgcagt ttcaaaccac gagtcaattc atcgacacgg cgtttggtac gaccaaagac
    18001 aatagacaat tctggctggt caacatccat aagacgagtc atggtgtcga atttttcatg
    18061 ttctttgaca cgaagataat attggtcaac attgacatta gtcaattcct ttgctgcaat
    18121 cttaacgtgc tcaggttctt tcatgaactt gacaccaata cgcttgattg gctctggcat
    18181 ggttgcagaa aacagaaggg tttgacggct ctctggtaca cgttcgatga tcgcttcaat
    18241 atcatccaag aagcccatgt tgagcatttc atctgcctcg tcaagaatga gagtttcaac
    18301 accgtcaagt ttgagggcct tgcgtttgat caagtccaag aggcgacctg gtgtaccaac
    18361 aacgatgtga gcacctgaac gaagggcctt gatttgcttt tcaatgcttg agccaccgta
    18421 aacagagcgg actttcacac ccttttcacg accaaatttg aaaagttctt cttgactctg
    18481 caccgccaac tcacgtgttg gggcgataat caaggcctga attgcttgat tgtttgtgtc
    18541 aattttgttg agggttggca aaccaaaggc tgcagttttc cctgtccccg tctgggcttg
    18601 accaatcaca tctttacctt caagagcaag cggaatggtc tgctcctgga ttggtgacgg
    18661 cgtttcaaaa ccagccttct caacggcaag caaaatatct tctgataatt gtaaatctgt
    18721 aaatttcaat gtattctctt ttctaaaagg cagtgcgaag ctaccttatc taactttttt
    18781 gtaacaagat atcagggtcg aaccactgat attggatttg caacttacca agtataacac
    18841 aatctaacaa taatagttaa tatttacctt taaaaagtca ataatacgtt ttcatgagga
    18901 gtccat
//
LOCUS       DASFQD010000038        17963 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.038, whole genome shotgun sequence.
ACCESSION   DASFQD010000038 DASFQD010000000
VERSION     DASFQD010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 17963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17963
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.038"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(7..1347)
                     /locus_tag="U1021_000987"
     CDS             complement(7..1347)
                     /locus_tag="U1021_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018164876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GHKL domain-containing protein"
                     /protein_id="HEM4711539.1"
                     /translation="MSVVEYIVEGLVSFVSIIILFFSINRLNYSIRSIALVILLRVPI
                     AIVFATLNQLFPSQFLSYFDTPLYGFLLAMILLRPLPKTLLIFYGLLPFTLENLFYRM
                     VSYFVLPLLGQSSGIIEDTPPFILVNFLSISAALFFLKWLKYDFVKLRTDNLVTEDKR
                     LLYLTNWVMVAYYILMQTLTYLEYDIGLPTMAHRQFILVTYLVIFMGIIKQLDFHLRK
                     KLQEQLDFQQTLQLKSLEDYSKQVEDLYREVKGFRHDYANLLTTLRLAIEDNDIEQIK
                     DIYQSVLKDSHKRLRASKYDIGRLVNIDNSALKSLLASKFLQANDNNVSVSLEVPDVI
                     KPQGMELVDFITIVSILCDNAIDAAIDAAPKVTIAFLTVDDKQMFIIENTTKVENIDL
                     SNVYSFGHSSKGDNRGVGLYNVMKILERYPHVSLNTTSASYLFCQSLEIGLTSN"
     gene            complement(1361..2098)
                     /locus_tag="U1021_000988"
     CDS             complement(1361..2098)
                     /locus_tag="U1021_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012516119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4711540.1"
                     /translation="MNIFVLEDDFKQQARIEKIITKLLEKHNIVPKKFEISGKPHQLL
                     QAIEEKGVHQLFFLDIEIKEDELKGLQVAKQIREIDPYASIVFVTTHSEFMPLSFRYQ
                     VSALDYIDKELGVTEFESRIEAALLHTHNKDNSAVSDDSFYFKSKYAQVQYPFNEVYY
                     IETSPRPHRVILYTKTDRMEFTASLSDILKQDKRLVQCHRSFAINPRNVLKVDRNEKQ
                     IYFPNGATCFISRQKLESTLAAVANLH"
     gene            complement(2100..2441)
                     /locus_tag="U1021_000989"
     CDS             complement(2100..2441)
                     /locus_tag="U1021_000989"
                     /inference="COORDINATES: protein motif:HMM:NF016296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family transcriptional regulator"
                     /protein_id="HEM4711541.1"
                     /translation="MNFMIIKVKDETKKVLLSDILYIISHPSKPHYIQIVTEKEIYDC
                     LQKLQNIEKMYPEYFIRCHRSSLVNRSKIKVINSREKRIFLGEKGEHCLTFSRRRYQD
                     ILHQWINKGGM"
     gene            2820..3035
                     /locus_tag="U1021_000990"
     CDS             2820..3035
                     /locus_tag="U1021_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009880371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711542.1"
                     /translation="MNNYLKNVRDYSELATIIIIGQNIDYEELFKNHYRVFGVIDTTN
                     NKSLTFIRDQVHFYLDGLYGLKKKESD"
     gene            complement(2971..4851)
                     /locus_tag="U1021_000991"
     CDS             complement(2971..4851)
                     /locus_tag="U1021_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000261815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HEM4711543.1"
                     /translation="MVVTKHFAVHSTKYRKSLIKYILNPEKTKQLKLVSDFGMSNYLD
                     FPSYGELVEMYQANLTNNDRLYDSRNDRQQIKQAKIHAHHLIQSFSPEDKLTPEEINR
                     IGHETIKELTGGNFRFIVTTHTDRDHVHNHILINSVDLNSDKKLKWDYAQERNLRMIS
                     DRLAKEAGAKIIPPKRYSHEQFETYRKTNHKFELKQRLYFLLENSKNFEDFVAKASDL
                     NVEMDFSRKHARFFMTDRDMKQVIRGHQLDKRQPYTEDFFREHFAKRAIEQRLDFLLP
                     RARDLSHLLDMAEQLNLTISPKKKHVTFTLKEGDRTISMENKKVSTKHLYDVQFLEDY
                     FDKRDITPEHDLANLVSDFEAYQEERDKDKLPREELLAAYEDFKDKRDQIQEFEVVLA
                     DHQIDKLVKDGIFIRMTYGVKKDGLVFIPNRNLDIHESDQGKIYHVFIRETAQFFIYN
                     KENSDLNRYMRGRELIRQLTHDSKHLPKRRRPNMTSLKEKIAELNLLIELDLNNQSYQ
                     EVKDELINEIAQLDLTITDLQDKVAHLNKVAEVLLNLNNSDPENRRLARYDYAKMNLT
                     PAIKLEEVEKEISENQDTMTKWIDDYEYKVRRLEILVQTLSHSLSSSDHRDRPSKNEL
                     GL"
     gene            complement(4838..5203)
                     /gene="mobC"
                     /locus_tag="U1021_000992"
     CDS             complement(4838..5203)
                     /gene="mobC"
                     /locus_tag="U1021_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000263054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid mobilization relaxosome protein MobC"
                     /protein_id="HEM4711544.1"
                     /translation="MENRYRTNLKKVFLTDHELATLNDRIGQSGCKNFSAYARKVLLN
                     PNMTFLTIDTSNYEELVFELKRIGNNLNQIARTVNQTHILTPSDREILVQGIGQLIKE
                     VEKDFNIKCQQLKEFYGRH"
     gene            complement(5206..5568)
                     /locus_tag="U1021_000993"
     CDS             complement(5206..5568)
                     /locus_tag="U1021_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013851909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711545.1"
                     /translation="MTDHYRIIRKEINLTPEELEQIQELMRQEHAEQFSPFVRQKLMD
                     LVERKQAATDWFAFWQSQKIEQISRDILQVTIMAEQTQHVTAEHLRIILTCVQELMAE
                     VEKFIPLSTDFRDKYMGG"
     gene            complement(5896..7329)
                     /locus_tag="U1021_000994"
     CDS             complement(5896..7329)
                     /locus_tag="U1021_000994"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711546.1"
                     /translation="MTEKLIKIDSQNLPGDGFIGFERYLEQYGLPTDNVIASESERQL
                     MQKMLPQILENMPQEHKTNARYLSKFVAGAAIGLYDASLNFVWNEVMIKIYQKIIRYG
                     VEIFFNSAVSESDKELYKSEEDLPHLKDRVVLDHCKKLGLISQALYLRLTHILDMRNH
                     VGASHPNDDQIRTSELLGWLQTCIDDVISEKVNTHAITVKSIIDNTKSRESFFSQIDK
                     EQFENSIKELSPQFIANLTDTLFGIFVSENYKGKQFILENFLSLLIISWKYTTDTFRY
                     SLGERLDVFRGQLNEYKINQAELFFEKVNGKRYYSTDHKIIQLSVKCEQLKNAHYNWD
                     NYANETPIAREVLHLAPTPSDVPEMRKDLLIETFLLCRIGKNVSYQKGVSPGGRLYYD
                     KFFQKFDEDAIRRMIILLSSDNINIYGDIQNSNLLEILNLIPRTMIGEQYIEVLEQLT
                     AFISDNKKITSYFNTSDFKRFRDNFLS"
     gene            7548..8197
                     /locus_tag="U1021_000995"
                     /pseudo
     CDS             7548..8197
                     /locus_tag="U1021_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018165746.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            8481..8780
                     /locus_tag="U1021_000996"
     CDS             8481..8780
                     /locus_tag="U1021_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001072430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711547.1"
                     /translation="MNQLEFQRNELQMDYFSESYRQFESDFYRYSALDIPLTFLTDDI
                     LLAMAKSKKTYIKLNKEKSKDNRDHYFLFRVESLDNNKFIRKYTYEKTMTSIKES"
     gene            complement(8793..8939)
                     /locus_tag="U1021_000997"
     CDS             complement(8793..8939)
                     /locus_tag="U1021_000997"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711548.1"
                     /translation="MLRDLFKPKEKSLPSSDRFKSLIHTLSAMTDTELEKRIEQFKQS
                     KKES"
     gene            complement(8982..9401)
                     /locus_tag="U1021_000998"
     CDS             complement(8982..9401)
                     /locus_tag="U1021_000998"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711549.1"
                     /translation="MTTQTDWTYDGSLDQPTPTTPDQERAKIAALFGKGDPAPSPTTE
                     TIDYQAEFQKLKAGELQQASQENTEVSTPAVTLSPTLDKDPTTLYKEHLQKQLTSHET
                     DMSSYQQELDRLQELVNEKGNTIKTITAILKAMDTLV"
     gene            complement(9398..9634)
                     /locus_tag="U1021_000999"
     CDS             complement(9398..9634)
                     /locus_tag="U1021_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711550.1"
                     /translation="MSQVARLEEKVKKQAEKVAREEERLNTYQDQLQEAMYSTFITYQ
                     ASSQIRFDEALERVFGKLSKPHTPQESNDTRRTE"
     gene            complement(9700..10791)
                     /locus_tag="U1021_001000"
     CDS             complement(9700..10791)
                     /locus_tag="U1021_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018367274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEM4711551.1"
                     /translation="MIALETIKKKSIVDVAGALGVPLKRLSSTLYEQVEHDSFKIFTN
                     TNTFKWFSRDIQGDVIDFVQLIAGVSFKEAIHFLDKGDFPEQEVQVLKLEPFRYSLPE
                     SKDFGSARTYLKTIRHLSDETINTFGRQGLLAQGKWQSGNFSEPVVVFKSKDHHGRLV
                     GASLQGIEEHPDRYERGRLKNIMKGSHGYAGISLTIGKPKRLVFAESVIDLMSYYECQ
                     KEKLADVRLVSMEGLKKSVIAYHVIRLASEEKGNFSFLDELDKGRLSHYLDVILQTST
                     YFNQHNHLLTFAVDHDKAGRDFIEKLKDQGFPLEQDLPPLGLLDGKADWNEELMRRKS
                     EPSLDDWLCQFYEERSQAVYSPRTPTLDL"
     gene            complement(10835..11479)
                     /locus_tag="U1021_001001"
     CDS             complement(10835..11479)
                     /locus_tag="U1021_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018367275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711552.1"
                     /translation="MIDKTKQIILVSVASLALLAFVSTMGYSLGKQSVTNETRAAIKQ
                     EAKKLQEEQAQKEKSSRLSQEGVEEFLRHYFTKKQLGENNTRLKPYLTESAYREELTR
                     QEDTLQQVYKDYILDYQYQEADIYLNHASNEVLAEVSYTVTYVPDLEQKDKAQTNQVE
                     KRLLRLTYTKLGDKLLVNHLQTYSVGLSEALTKVQFDRPEPAAVPELPVSTTRP"
     gene            complement(11618..11938)
                     /locus_tag="U1021_001002"
     CDS             complement(11618..11938)
                     /locus_tag="U1021_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000645121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="role in replication"
                     /protein_id="HEM4711553.1"
                     /translation="MKARYKGNVVEVWEIGKQTSQPDWVKEAFKKNYIVWLDNHVRIL
                     MAGLNPSIATNMKIGVTGTAGGGFAGYGMYVLGYPGDYLDVTNHRVVSLKHFQRDYEI
                     LKEN"
     gene            complement(11956..12183)
                     /locus_tag="U1021_001003"
     CDS             complement(11956..12183)
                     /locus_tag="U1021_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004261064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComC/BlpC family peptide pheromone/bacteriocin"
                     /protein_id="HEM4711554.1"
                     /translation="MNTDVMKRFKSLSNENLMHIAGGWSGWGDILQGILGGFAPSPTV
                     DQLNGKWPVRNPPKPCSPYGTGGTPNACNGF"
     gene            complement(12384..12707)
                     /locus_tag="U1021_001004"
     CDS             complement(12384..12707)
                     /locus_tag="U1021_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018367276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711555.1"
                     /translation="MFEELGQIILILIAIGGILLLLYRLFLAATGLLLIGGGLFLAFM
                     EVYGLYLLFTETDLFVRDFQTNDWLSFPTFFVGINGLLASLLVKKLSKMVIKRLSMLL
                     KPGQT"
     gene            complement(12709..13014)
                     /locus_tag="U1021_001005"
     CDS             complement(12709..13014)
                     /locus_tag="U1021_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018367277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711556.1"
                     /translation="MTDQFENMKHQLDNLLSEGFSTPDQYEVYRDLKDQYEESTGDVS
                     FSIREVTGQLEVIMTNRETFFPDLDEGTRVEYLDLVERLEELDNTKAAYYRRQLGEA"
     gene            complement(13083..>17963)
                     /locus_tag="U1021_001006"
     CDS             complement(13083..>17963)
                     /locus_tag="U1021_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018367278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEM4711557.1"
                     /translation="DYNPQFEEERAELKSLVSDKEYSNMKQSSLTAYYTDPAIIRAMW
                     EKLVSDGFRGGRVLDPSMGTGNFFSAMPAQLTEKCDLYGVELDGITGAIAKQLHPNTT
                     IFLQGFEDVPFQTDSFDLVISNIPFGNFRIADNRYDKPYMIHDYFIKKSLDLVHDAGQ
                     VAVISSTGTMDKRVDNVLQDIKDTTQFLGGVRLPDSAFKAIAGTSVTTDILFFQKDLD
                     KSVTDETITFSGSKRYATDDRIWLNPYFDGEDNPQVLGTYEVKNFNGGTLSLKGSGQD
                     LLLELKEALKQVSLPQVKDNIFIQSQVLMEKKVDKSIPQRIWDSLELYSFGYEGDTVY
                     YRDRDGIRVGAKTEEISYYINDAGEFVAWDSKYSQATIDRFVALTVTDETAVDVYLSK
                     EATKTGRHKGLYKKTVFYEGSLSDKEVARIKGMVNLRNTYQEMIDLQRDYDYDRDRFE
                     GLLGDLNYQYDRFVKRYGYLNSNVNRNLFDSDDKYSLLASLEDEYIDPVDKKVKYKKS
                     LAFEKALVRPDRILKEVKTAQDALNTSLADGRGVDIPFMMSLYPGKTEGDVIEELGDL
                     VLLDPAYALLGKAVYVSRQDFLSGDILTKLDQVDLLQKEDNSLADWRHYQTLLEAVKP
                     RQIGLADIAYRIGSRWIPKEVYGQFAYTVLLEEERPLDDPILADVIEVSPIDGTYTLS
                     KVFTNCPVSAQEYTLGVKGSRYDSGRKVFENLLNSNQPTITKTVKEGDKQKQVTDAQR
                     TSLLRSREADMQGLFQDFVLSSPEVQVLIEDTYNTLYNRTVSKTYDGSHLVIDGLAQN
                     ITLRPHQKNAIQRIVEEKRALLAHEVGSGKTLTMLGAGFKLKELGMVNKPLYVVPSSL
                     TAQFGQEILKFFPTKKVFVTTKKDFVKSRRKQFVSRIITGDYDAIVIGDSQFEKIPMS
                     KAKQEVYILDKLSQMREIYLNSENDYTVKESERAIRSLEERLEELQKLDRDSFIEFEN
                     LGIDCLFVDEAHHFKNIRPITGLGNVAGITNITAKKNVDMEMKVRQVQSEHDNRHVIF
                     ATGTPVSNSISELYTMMNYVQPDVLERYQVAHFDSWVGAFGQIENSMELSPTGDKYQP
                     KKRFKKFVNLPELMRIYKETADIQTSDMLDLPVPEARIIPVESELTDSQRYYLEELVA
                     RSEDIKNGLVEPTVDNMLKITGEARKLAIDMRLIDPAYKLSDSQKLLQVVDNVERLYR
                     ENMVTESTQMIFSDIGTPKKDGDVFDIYNELKVLLVDRGIPANQIAFVHDANTDDKKN
                     SLSRQVNSGEVRILMASTEKGGTGLNVQAKMKAVHHLDVPWRPSDIVQRNGRLIRQGN
                     QHQEVDIYHYITKGSFDNYLWQTQENKLKYITQIMTSKEPVRAAEDIDEQTMTASDFK
                     ALATGNPFLKLKMELENELGLLDNERRAFERTKDDYRYTIRVAERDLPALEKRLGRYD
                     QDIANSKSSKGKDFVMSFGSQNYTEKGEAGEYLHQLIRQNRSETKELRTLAHYRGFAL
                     KVTTRSMTEPVPEIVTLRVVGDNQYSVSLDLKSPIGTLQRINNVIDDIAKDKEMTETL
                     AKTMRDKAAVAKEQVDKTFSKEEHYQKLKAQYDVLAPLIEAGESIEIIEEALAPFLNQ
                     PNKQEIVLDDQLSLEI"
BASE COUNT         5025 a         3937 c         3469 g         5532 t
ORIGIN      
        1 ttttacctaa ttagatgtca gtccaatttc taaggattga caaaacagat aagatgcact
       61 agtcgtgtta agtgatacgt gtgggtaacg ctctagaatt ttcatcacat tatataaacc
      121 aactcctctg ttatcccctt tggaactatg accaaaggaa taaacatttg aaaggtcgat
      181 attttctacc ttagttgtat tctcgataat aaacatctgc ttatcatcaa ccgtcaaaaa
      241 ggctatcgtt acctttgggg cggcatctat ggcagcgtct atggcgttat cacataatat
      301 cgatacgatg gtgataaaat ctaccaactc cattccttgt ggcttaatca cgtctggtac
      361 ctccaagcta actgatacat tattatcgtt ggcttgcaag aatttagacg ccagtagact
      421 tttcaaggcg gagttgtcaa tattgaccaa tcgtccgatg tcatatttac tagctcgcaa
      481 tcgtttatgt gaatccttta atacggactg gtaaatgtct tttatttgct caatatcatt
      541 gtcttcaata gccaagcgta atgtggttaa caagttagca taatcatgcc taaaaccttt
      601 cacttcacga taaagatcct caacttgctt actataatct tccaagcttt tgagctgcaa
      661 ggtttgttga aaatcaagct gttcttgtag cttttttcgc aaatggaaat caagttgttt
      721 gataattccc atgaagataa caagataggt cactagaata aattgacgat gagccatggt
      781 cggcaatcca atgtcatact ctaaataagt caaggtctgc atcaagatgt aatacgcaac
      841 catcacccag ttggtcagat agagcagccg tttgtcttca gttacaagat tgtctgttct
      901 taacttgaca aagtcatact ttagccattt taaaaagaaa agagcagccg atatagacaa
      961 gaaattaacg agaataaaag gtggtgtatc ttctataatt cccgatgact gccccaataa
     1021 aggtaaaaca aaataggaca ccatgcgata aaagagattt tctaaggtaa agggcagtag
     1081 accatagaaa atcaaaaggg tcttcggtaa gggccgcagc aatatcatgg ctaggagaaa
     1141 accatacaaa ggggtgtcaa aataagataa aaattgactc ggaaataatt gatttaaagt
     1201 tgcgaaaaca attgcaattg gtactctgag cagaataacc aaggcgattg agcgaatgga
     1261 ataatttagt cggttaatac taaaaaagag aatgataatc gaaacaaatg aaaccaaccc
     1321 ctcgacaata tactcaacaa ctgacatctt atctccttca ttagtgcaga ttagcaacag
     1381 ctgctaaagt tgattctagc ttttgccttg aaataaaaca ggtggctcca ttaggaaagt
     1441 agatctgttt ttcatttcta tccactttaa gaacattcct cggattgatt gcaaacgaac
     1501 gatggcattg tacaagtcgt ttatcttgtt tcaaaatgtc tgacaaactt gctgtgaact
     1561 ccattcggtc tgtcttggta taaaggataa cacgatgagg gcggggagaa gtctcgatgt
     1621 agtacacttc attgaatggg tattgtactt gagcatattt ggacttaaaa tagaatgaat
     1681 catccgatac ggcgctattg tccttattgt gagtatgaag taaagctgct tctattcgcg
     1741 attcaaattc ggtaactcca agctctttgt caatatagtc caaggcagat acctggtacc
     1801 tgaaagataa gggcataaac tcggagtgtg ttgtcacaaa aacaatacta gcataagggt
     1861 caatctctct aatttgttta gcgacttgaa gtccttttag ttcgtcttcc ttaatctcaa
     1921 tatctaaaaa gaagagctga tgtactcctt tttcttctat tgcttgaagt agctgatggg
     1981 gttttcctga aatttcaaat tttttcggaa cgatgttgtg cttttctaac agcttagtaa
     2041 taatcttctc aattctcgct tgttgcttaa aatcatcttc caatacaaag atattcatgc
     2101 tacattcctc ctttgttaat ccactgatgc agtatgtcct gataacgacg tcttgaaaaa
     2161 gtaaggcaat gttctccttt ttctccaaga aaaatacgtt tttctcgaga attgataacc
     2221 ttaatttttg aacggttaac tagactagaa cgatgacatc taataaaata ttctggatac
     2281 attttctcta tgttttgtag cttttgtaaa caatcataaa tctctttctc agtcacaatt
     2341 tgaatgtaat gtggcttaga tggatgcgat atgatatata gtatatctga cagcagcact
     2401 ttctttgttt catctttgac tttgataatc ataaagttca taggtatatc ctcctatgaa
     2461 caccatagca taggaacaac atcatatttc cttcaaatcc taaatggttg tccaaacgtc
     2521 ttgaatggta agattttacc atttaggaaa gttagaggtc tattcaggaa atgaagctca
     2581 ctaaaccaac aataactgat ataattaaat tcctaaatca ttgaaaaaga aaggatacta
     2641 tgcttgaaat ctttccttat tccccattaa gtatttttat cgcaatcgtc attaaaggtt
     2701 acttaatcag tcatcagatt tattcaaaaa tcaaactatc tttctcttat tatccgtata
     2761 agtacgatag tcctactact tattttatca taaaatctaa gtttttaaca tcagagaaga
     2821 tgaacaatta cttaaagaat gtacgagatt attcagaact agcgactatc attattattg
     2881 gccaaaatat cgattatgaa gaactcttca aaaatcatta tcgggtattt ggcgtgattg
     2941 atacgacaaa caataaatca ttaacattta tcagagacca agttcatttt tacttggacg
     3001 gtctctatgg tctgaagaag aaagagagtg actaagtgtc tggactaaaa tctccagtct
     3061 cctaacctta tattcgtaat catctatcca tttcgtcatg gtgtcttgat tttctgagat
     3121 ttctttctcc acctcctcca gtttaatggc cggtgtcaga ttcatcttag cataatcata
     3181 cctagctaac cgtctgttct ctgggtctga gttgttgaga ttgagcagga cttcagcgac
     3241 cttattcaga tgagcaacct tatcctgcaa atctgtaatg gtcaaatcca gctgggcaat
     3301 ttcgttgatg agttcgtctt tgacttcctg ataagattgg ttgttgagat ctagttcaat
     3361 aagaagattg agctctgcaa ttttctcttt aagactggtc atgtttggtc gtctgcgttt
     3421 agggagatgc ttgctgtcgt gagtgagttg gcggattaac tctcgtcctc gcatgtagcg
     3481 gttgaggtca gagttctctt tattgtagat gaaaaactga gcggtctcac ggataaaaac
     3541 atggtagatc ttgccctgat cgctctcatg aatatccaag ttacggtttg ggataaagac
     3601 caagccatct tttttgacgc cataagtcat tctgataaag ataccgtcct taaccagctt
     3661 gtcaatttgg tggtctgcta gaaccacttc aaactcctga atctggtcac gtttgtcttt
     3721 gaagtcctcg taggctgcta gaagttcctc tcttgggagc ttgtccttgt ctcgctcttc
     3781 ttggtaggct tcaaagtctg agaccaggtt agccaagtca tgttctggtg tgatgtctct
     3841 tttatcaaaa taatcctcca agaactggac atcgtacaag tgttttgtgc tgaccttttt
     3901 attctccatg gaaatggttc ggtcgccctc tttcaaagta aaggtcacat gctttttctt
     3961 cggagagatt gtcaggttta actgctctgc catgtccaaa agatgagata ggtcacgtgc
     4021 tctgggcaag aggaaatcca gtcgttgctc aatggctcgt ttggcaaaat gctctcggaa
     4081 aaagtcctcg gtgtagggct gtcgcttatc cagctgatgg ccgcgaatga cctgcttcat
     4141 gtctcggtcg gtcatgaaaa atctggcgtg cttacgagag aaatccatct ctacattgag
     4201 atctgaagcc ttggccacaa agtcctcaaa gttcttactg ttctccagga gaaaatagag
     4261 ccgttgcttg agttcaaact tgtgattggt cttgcggtag gtttcaaact gctcatgcga
     4321 atagcgcttg ggcggaataa tctttgctcc tgcttccttg gccaagcgat cagaaatcat
     4381 gcgaagattc ctctcctggg catagtccca cttgagcttc ttatcagaat tgaggtcaac
     4441 agagtttatc aggatatgat tatgcacatg atctctatct gtatgggttg tgacgatgaa
     4501 acgaaaattg cctcctgtca attccttgat ggtctcgtgg ccaatgcggt taatctcttc
     4561 tggtgtcagc ttgtcttcag gagaaaaaga ttgaatcaag tggtgggcat ggattttggc
     4621 ctgctttatt tgctggcggt cgtttctgga atcatagagc cgatcattgt tggtcaagtt
     4681 ggcctgatac atctccacca gctctccata gctgggaaag tctaggtagt tgctcatgcc
     4741 aaaatcagag accagcttca gctgcttcgt cttttctgga ttgagaatat acttgatgag
     4801 gctcttgcgg tacttggtgc tatgcaccgc aaagtgctta gtgacgacca taaaactcct
     4861 tcagctgctg gcacttgatg ttaaagtcct tctccacttc ctttatgagt tggccaatgc
     4921 cttgcaccaa aatttcacgg tcgcttggtg ttaagatgtg agtctggttg acggtccgtg
     4981 cgatttgatt gaggttgttt ccgatacgtt tcagttcaaa gaccagttcc tcatagttac
     5041 tggtatcaat ggtcaagaag gtcatgttgg gattgagcag aacctttctg gcataagcag
     5101 agaaattttt acagccactc tgtccgatac gatcgttcaa agttgccaac tcatggtccg
     5161 tcagaaagac ttttttgagg ttggtacgat agcgattttc catatctaac ctcccatgta
     5221 cttgtcacga aaatctgtac tgagtggaat aaacttctct acttctgcca tcagctcctg
     5281 cacacaagtt aggataattc gcaagtgctc tgccgtgaca tgctgggtct gttcggccat
     5341 gatcgtcact tgtaaaatgt ctcgactgat ttgttcaatc ttctgggact gccagaaggc
     5401 aaaccaatcc gttgctgcct gcttcctctc aaccaagtcc atcagctttt gacggacaaa
     5461 gggggagaat tgctctgcgt gttcttgcct catcagctcc tgaatctgct ccagttcctc
     5521 tggtgtcaga ttgatttcct tacggataat gcgatagtgg tctgtcatct cgttatactc
     5581 cttctctagt tgcctctatc gggtcagccc cgataccgtg tgggatacgg gtgcttccta
     5641 aaagcctcat cgcttcgctt ttcggctttt gcgagctcag ttattgtgtc cacaataacc
     5701 caaaatctaa tcgtcagctg aacccaaacc ttacaggttg gtcagccgac gataagaaaa
     5761 tgtggtggct tcccccccaa acccccaaga aaaaatcaag gcttgatttt ctaaaactag
     5821 atagagtgta acaagagaga gctgaaaaaa ttatcacagg aaaagaaaaa gagccatttg
     5881 gctcttggaa aattatcaag ataaaaaatt atctctaaaa cgtttaaaat ctgaagtatt
     5941 aaaataacta gtaatcttct tgttatcact aataaaggca gttaattgtt ctaaaacctc
     6001 tatatattgt tcaccaatca tagttctcgg tattaaattt aatatttcta gcaaattact
     6061 attttgaata tcaccataaa tattgatatt atcactactg agtaaaataa tcatccttct
     6121 tatcgcatct tcatcaaact tttgaaaaaa tttgtcataa taaagccttc ctcctggtga
     6181 aacacctttt tggtaagaaa cattcttgcc aattcgacag agtaagaatg tttctatcaa
     6241 taaatctttt ctcatctctg gaacatctga aggagttgga gctaaatgta atacttctct
     6301 agcaattggt gtttcattag catagttatc ccaattataa tgagcatttt ttaactgttc
     6361 acattttaca gacaactgga taatcttatg gtccgtagaa taatatcttt tcccattcac
     6421 tttttcaaaa aatagctcag cttgatttat tttatattca tttaactgcc ctctaaaaac
     6481 atcgagcctc tctcccaagc tatacctgaa agtatctgta gtgtacttcc aactaattat
     6541 taacaaagaa aggaagtttt ctaggataaa ttgttttccc ttataatttt ctgatacaaa
     6601 tatcccaaaa agtgtatcag taagattggc aataaactga ggcgatagct cttttatact
     6661 gttttcaaat tgttctttat ctatttgtga gaaaaaactc tctctgctct tagtattatc
     6721 aataatactt tttaccgtta ttgcatgagt atttactttt tcagaaatta catcatctat
     6781 acacgtctgt aaccagccta gtaattccga tgttctaatc tgatcatcat ttggatgaga
     6841 agctccaaca tgatttctca tatccaaaat atgtgttaat cttaaataca aggcttgtga
     6901 aattaaaccc aattttttac agtgatctaa aacaactcga tcttttagat gcggtaaatc
     6961 ttcttctgat ttatataatt ctttatcaga ttcactaact gctgaattga aaaaaatttc
     7021 tacaccataa cggattatct tttggtatat tttaatcatt acttcattcc aaacaaaatt
     7081 tagtgaagca tcataaagac caattgcagc tcctgctaca aattttgaaa gataacgggc
     7141 gtttgtcttg tgttcctgag gcatattctc taaaatctga ggtaacattt tctgcatcag
     7201 ctgcctctca ctctcagaag caattacatt atcagtaggt agcccatact gctctaaata
     7261 tctttcgaaa ccaataaatc catcaccagg aagattctgt gaatcaattt taatcaattt
     7321 ttcagtcatt ccatcttttc ctcttacaat caatatttga actaatgcac aattttttat
     7381 aatttggcaa ttactttttc taacccattc attataccac actaaagata attctaaaaa
     7441 cgatttatgt acctcccttc aattttaaaa ttgtcatttt tctcttgaaa aataaagatc
     7501 tgtggtaaaa catttgtaag tttatagact gacgattgag gtttactatg ttttcaaata
     7561 agcaactaat acaaaaaaga aatgagttag gtttatccta ggcagaagtc gcacggcagc
     7621 tgaatatttc ccgtatgtct tacaacaact gggaatctgg taaaacaaaa cctaatcaaa
     7681 aaaatcttgc cgaactagca gtccttttcg gtgttgaccc agcttttttt gagtctgaat
     7741 accagattgt ttcaaactat ctgaagctaa atccagtgaa tcagggtaaa gctgatcagt
     7801 atgtcgaaga attattagac actcaacgag aagaagaaaa gaaaagaaaa ttgtccctct
     7861 ttttggtgtt gaggtttact ctgaccttgc cctatccgca ggatcaggta caaccatttt
     7921 tgatgaatac aaagctcaaa cggtttattc tgaggaagaa cggtatggct ttgaccttgc
     7981 tgcttggata gacgatagtt caatggaacc tgtttatcaa aatggagaag tcgccttgat
     8041 tcgtgcaact ggttttgatt aggacggagc agtttatgct ctatcatgga acgatagtgt
     8101 atatatcaaa aaattatacc gtggggaaaa tggatttaga atggtctcta tcaataagag
     8161 ccaccctaag cgttttatcc cttatgaaga tgaatagcgt atcgtagggc ttgttgtcgg
     8221 tcacttcata cctgttcaac ctgaattgct tttggaattg gaaaaactca aagaaaggta
     8281 aactactatt gctaagtcaa gtttatgcta atcaacgacc gactcgtcca accgtaaaag
     8341 accataacac cataaaacac tttgtgggaa ctattcccac tcttactaat agatagcttg
     8401 attataaaga tagccgaggg acatcgcaat gtttctttag ctaatcttct aagtattgaa
     8461 ctcacagaag aggggagaac atgaatcagc ttgaatttca aagaaatgaa ctccagatgg
     8521 attattttag tgagagttac cgacagtttg aatctgactt ctatcgctac tccgcactag
     8581 atattccatt aacatttttg acagatgaca ttttgcttgc aatggcaaag tctaagaaaa
     8641 catatatcaa actaaacaag gaaaagtcta aagataatcg tgatcattat ttcttattta
     8701 gggttgagtc tctagataat aataagttca tccgaaaata tacttatgaa aaaaccatga
     8761 cctcaataaa agagagttag aagttgttgc ttctagctct ctttcttact ctgcttaaac
     8821 tgctcaatcc gcttctctag ctctgtatcc gtcatggctg ataaggtatg aatcaaagac
     8881 ttgaaacgat ctgatgatgg taagctcttc tcttttggtt tgaatagatc tcttaacata
     8941 gtgctccttt cgcaaaaaac agtcccataa ggactgttcg cttagacaag tgtgtccatc
     9001 gcctttagaa tggctgtgat agttttgata gtgttgcctt tctcattgac cagctcctgc
     9061 aagcggtcaa gctcctgttg gtagctgctc atgtcagttt catggctggt cagttgtttt
     9121 tgaaggtgct ccttatatag agtggttggg tctttgtcca aggtaggact tagtgttact
     9181 gctggtgtgg acacctcagt attttcctgc gaggcttgtt gtaattcacc agcctttagt
     9241 ttttgaaatt ctgcctgata atcaatcgtt tctgttgtag gacttggtgc tgggtcacct
     9301 ttaccaaaaa gtgccgcaat ctttgctcgt tcctggtctg gtgtagtggg tgttggttgg
     9361 tctagtgaac cgtcataggt ccaatcagtt tgtgtcgtca ttctgttctc cttgtatcat
     9421 tagattcttg tggggtatgt ggtttggaca gttttccaaa aactcgctct aaagcctcat
     9481 caaagcgtat ttgactgctc gcttgataag tgataaaggt tgagtacatg gcttcctgga
     9541 gttggtcctg ataggtgtta aggcgttcct cttctctagc cactttctcg gcctgtttct
     9601 taactttttc ttctaggcga gccacttggc tcaaactcat aggcattcct ccttctttgg
     9661 gtttgggtct agcttatcag aggcctcttg attttttcat cacaagtcaa gagtgggagt
     9721 tctaggagaa tagacagcct gggaacgctc ctcataaaac tgacatagcc aatcgtccaa
     9781 actaggttcc gactttcgcc tcatcaactc ctcattccaa tcagctttgc catctagtag
     9841 acctaaaggg ggtaaatcct gctccagggg aaacccctgg tcttttaact tctcaataaa
     9901 gtctctccct gccttatcat gatcgacagc aaaggtcaag agatgattat gctgattaaa
     9961 ataggtgctc gtctgtaaaa tcacatccag atagtgactt aatcgtccct tgtccaactc
    10021 atcaagaaag ctaaaatttc ccttttcctc cgaagctaga cggatcacat ggtaggcaat
    10081 aacgcttttc tttaaccctt ccatcgagac cagacggaca tcggccaact tctctttctg
    10141 acactcgtaa taactcatca agtcaatcac agattccgca aagacaagtc gcttgggttt
    10201 acctattgtc aaactaatcc ctgcgtaacc atgggagcct ttcatgatat tcttgagccg
    10261 tccccgttca tatcggtctg ggtgttcttc aatcccctga agactggctc ctaccaatcg
    10321 cccatgatga tccttgcttt taaacacgac cactggctct gaaaagttgc cgctctgcca
    10381 tttcccttgg gcaagaagtc cttgccgacc aaaggtgtta atggtctcat cagataagtg
    10441 acggatggtc ttgagatagg tgcgagcaga accaaagtcc ttactttcag gaagagaata
    10501 acgaaacggt tccagtttta acacctgcac ctcctgctct ggaaaatctc ccttgtccaa
    10561 aaagtgaatg gcttccttga agctaactcc tgctatcagc tgcacaaagt cgatcacatc
    10621 gccctgaata tcccgtgaaa accacttaaa ggtattggtg ttagtaaaga tcttgaagga
    10681 atcgtgttcc acctgctcgt aaagggtgct ggataagcgt ttcaaaggca cccccaaggc
    10741 tcctgccaca tctacgatgg acttcttctt aattgtctct aatgcaatca tctcattctc
    10801 ctatatgaaa ataagcagaa ggctgggctt ctgcttaggg tcttgtggtt gaaacaggca
    10861 attcaggaac agctgctggc tctggtctat caaactgcac tttcgtcagt gcttctgata
    10921 ggcctaccga ataggtctga agatggttga ccaagagctt gtctcccagc ttggtgtagg
    10981 tcaatcgcag gaggcgtttt tcgacttggt tggtctgagc cttgtccttc tgctccaagt
    11041 ctgggacata ggtcaccgta taagacacct cggctaagac ctcgttcgag gcatgattga
    11101 ggtaaatatc agcctcctgg tactgatagt ccaaaatgta gtccttatag acctgttgga
    11161 gggtatcttc ttggcgggtc aattcttcac ggtaggcaga ttccgtcagg taaggcttga
    11221 ggcgtgtgtt attttctccc aattgtttct tggtgaaata gtgacggaga aactcctcga
    11281 caccctcttg agataagcga ctagacttct ctttttgggc ctgctcctct tgtagctttt
    11341 tggcctcttg cttgatagct gccctggtct cgttggtcac actctgtttt cctagactgt
    11401 aacccatggt cgagacaaag gccagtaaag caagactagc tacacttact aagataatct
    11461 gcttggtttt atcaatcatc aatttttcct cttttctgtc atgataaacc aagaatacca
    11521 tgaggagatt ggggatttta tcacaggtct tcaaaataaa aaaaaacgca tcatgtcaag
    11581 ttttaaaaca tcgatatgat acgttttgtt gcaaagacta attctctttg agaatttcat
    11641 aatctctttg aaaatgtttt agagaaacaa cacgatgatt agttacatca aggtaatcgc
    11701 caggatagcc caaaacatac attccatatc ctgcaaatcc tcctccagct gtacctgtta
    11761 ctccaatttt catattagta gctatagacg gattaagtcc agccatcaga attcgtacat
    11821 gattgtctaa ccaaacaata tagtttttct taaatgcttc tttgacccaa tctggttgtg
    11881 aagtctgctt cccgatttcc caaacttcca caacattgcc tttataacgt gctttcattt
    11941 tattcccctc aaaaactaaa agccattaca tgcatttggc gtgcctccag taccatatgg
    12001 gctacatggt tttggaggat tcctaactgg ccactttccg tttaattgat ctacagtagg
    12061 agatggtgca aatcctccaa gaatcccttg aagaatatct ccccaaccag accatccacc
    12121 agcaatatgc atcaaattct cattactaag actcttaaat cgcttcatga catctgtatt
    12181 cataatgaat acctccttat gttttctatt ttttgtccgt tgcaacttga cacccttagt
    12241 ataccactct tcttacaaaa ataatcacca tttcctgaac agtcatttaa ctttcctgaa
    12301 tgggaaaaat attgccactc aagattaaaa tacagccatt caggaaaaga caccagccaa
    12361 agctggtgtc gataacgaat aacttatgtc tgtccaggct tgagtaacat gctcagacgt
    12421 ttaatgacca tcttactcaa ttttttgacc agtaagctag ccaataaacc atttatccca
    12481 acaaagaagg tgggaaaact gagccagtca ttggtctgaa aatctctgac aaagaggtct
    12541 gtttcagtaa acaacaggta aagaccataa acctccataa aggctagaaa gagacctcct
    12601 ccaatgagca ataagcctgt cgccgccaga aacaagcggt aaagcaggag aagtatccct
    12661 ccaatagcga tgagaatgag aataatttgc cctaactctt caaacatctt atgcctcccc
    12721 tagctgtctg cggtagtaag ccgccttagt gttgtccagc tcctcaagtc gttcaaccaa
    12781 gtccaaatac tctacccgtg tcccctcatc gaggtctggg aagaaggtct cacgattggt
    12841 catgataacc tctaattgac ccgtgacctc acgaatggaa aagctcacat cacctgtgga
    12901 ttcctcgtat tggtctttca agtcacgata aacctcatac tggtcaggag tgctaaaacc
    12961 ctcactcaaa aggttatcta gctggtgctt catgttttca aattggtctg tcatcatgtc
    13021 tctccttttc ttctgttacc attagtttac cgcgttcaat cctttttgtc agctcattgc
    13081 tgctaaattt ctaaagaaag ttggtcgtca aggacgattt cttgcttatt gggttgatta
    13141 agaaagggag ctagggcttc ttcaatgatc tctatagact cacctgcttc aatcagaggt
    13201 gcaaggacat cgtattgggc tttaagtttt tgataatgtt cttccttact aaaagtctta
    13261 tcaacctgtt ccttggcaac tgctgcctta tccctcatgg tcttggccaa agtttctgtc
    13321 atctccttgt cctttgcaat gtcgtcaatc acattgttaa tccgctggag agttccaata
    13381 ggggatttca aatccaggct caccgaatac tggttgtctc ccacaactct aagcgtgaca
    13441 atttcaggaa caggttcagt catgcttctg gtcgtcacct tcaaggcaaa acctcgataa
    13501 tgggcaagag ttcgcagctc cttagtctct gagcgattct gacgaatcaa ctggtgcagg
    13561 tactcccctg cctcgccttt ttcggtgtag ttttggctac caaaggacat gacaaagtcc
    13621 ttacccttac tacttttaga gttcgctata tcctgatcat aacgaccgag acgcttctca
    13681 agagctggca aatctcgctc ggccacccgt atagtatagc gataatcgtc cttagttcgt
    13741 tcaaaggctc gtcgttcatt gtccaaaaga cccaattcat tttccagttc catcttgagt
    13801 ttaagaaagg gattgccagt cgccaaagcc ttgaaatcag aagcggtcat ggtctgctca
    13861 tcaatgtcct ctgccgctcg aacaggttct ttagaagtca taatttgggt gatatacttg
    13921 agcttattct cttgggtctg ccagaggtaa ttgtcaaagc tccctttggt gatgtagtga
    13981 tagatgtcca cctcttggtg ctgattgccc tgacgaatca gccgaccatt tcgctggaca
    14041 atatcacttg gtcgccaagg aacgtccaaa tgatgtacag ctttcatctt agcttgaacg
    14101 ttgagacccg ttccaccttt ttccgttgag gccatgagaa ttcggacctc gccgctattg
    14161 acctgacgag atagactatt cttcttgtcg tcagtattgg cgtcatggac aaaggcaatc
    14221 tggttggctg gaataccacg atcgactaag aggactttca attcgttata gatgtcaaaa
    14281 acatctccat ctttcttagg tgtgccaata tctgagaata tcatctgggt actttctgtc
    14341 accatattct cccgataaag ccgctccaca ttgtccacca cctgaagaag tttctgactg
    14401 tcagacagct tgtaagcagg gtctatcaac cgcatatcaa tggcgagttt tctggcctca
    14461 cccgttattt tgagcatatt atccacagtc ggctctacca gaccgttctt gatatcttca
    14521 gaccgtgcca ctaactcctc caagtaatag cgttggctat ccgtcaactc actctctact
    14581 gggataatcc tagcctctgg cacaggtaag tccaacatat ccgatgtttg aatatcagct
    14641 gtttccttat aaatccgcat aagttcaggc aggttgacaa acttcttaaa gcgtttctta
    14701 ggctggtact tatctcctgt cggagacagt tccatcgaat tttcaatttg gccaaaggct
    14761 cccacccaag aatcaaagtg agccacctga taccgctcca agacatctgg ctgaacatag
    14821 ttcatcatgg tgtagagctc actgatggaa ttggaaacag gggttcctgt cgcaaagatg
    14881 acatggcgat tgtcatgctc tgactggacc tgccgcacct tcatctccat gtccacattc
    14941 ttcttggccg tgatattggt aatacctgcc acgttgccca agcctgtgat gggacggata
    15001 ttcttgaaat ggtgggcttc gtccacaaag aggcagtcaa tgcctaagtt ctcaaactcg
    15061 ataaagctgt ccctatccag tttttgaagt tcttctaagc gttcttccag agagcgaatg
    15121 gcccgctcgg attccttgac tgtgtagtca ttctcactat tcaggtaaat ctcacgcatc
    15181 tggctcagct tatccagaat atagacttct tgtttggcct tactcatggg aattttctca
    15241 aactggctat ctccaatgac aatggcatca taatctcctg tgataatacg tgagacaaac
    15301 tgcttgcggc gagatttgac aaagtccttc ttggtcgtca caaagacctt tttggttggg
    15361 aaaaacttga ggatttcttg accaaattga gcagtcagac tagacgggac aacatagaga
    15421 ggtttattga ccatgcccaa ctctttcagt ttaaaccccg ccccaagcat agttaaggtc
    15481 ttgcctgaac ccacttcatg ggctaaaagg gctcgttttt cctccacaat gcgttgaatg
    15541 gcattctttt gatggggacg taaggtgata ttttgagcta agccatcaat aaccaaatga
    15601 ctgccatcat aggtcttaga caccgtacgg ttatacaggg tgttgtaggt gtcctcaatc
    15661 aaaacctgaa cctctggtga agataagaca aagtcctgga aaagcccctg catgtccgct
    15721 tctcgacttc tcaagaggct ggttcgctgg gcgtctgtca cctgcttttg cttgtcgcct
    15781 tctttgaccg ttttagtaat ggtcggttga ttagaattaa gtaggttctc aaaaaccttt
    15841 cgtccactat cataacgtga gcccttaacc cctaaagtat attcctgtgc agaaacagga
    15901 caattagtaa ataccttaga tagagtatag gtcccatcaa tcggactaac ctcaatcaca
    15961 tctgctagta tagggtcatc cagaggtctc tcctcctcca aaagcactgt ataggcaaat
    16021 tgcccgtaaa cttcctttgg aatccaacgg gagccaatgc ggtaagcaat atccgctaga
    16081 ccaatctggc gtggtttgac agcctcaagt aaagtctggt agtgcctcca gtctgccaag
    16141 ctattatctt ctttttgaag caaatccacc tgatctagct tggttagaat atcacccgat
    16201 agaaaatcct ggcgagagac atagactgct ttccctaaga gggcataagc agggtctaac
    16261 aagaccaaat cccctaattc ctcaatcaca tcaccttctg tcttgcctgg gtagagcgac
    16321 atcataaagg gaatatccac tccacgacca tcagctaggc tagtattgag ggcatcttgg
    16381 gcagtcttga cttcctttag aatacggtct ggacggacca aggctttctc aaaagccaag
    16441 gacttcttat acttgacctt cttgtccaca gggtcaatgt attcatcttc cagactagct
    16501 agaagagaat acttatcatc actatcaaaa agattacggt tgacgttgct attgaggtag
    16561 ccatagcgtt tgacaaagcg gtcatactgg tagttgaggt cgcctaataa cccctcaaat
    16621 ctgtctcggt catagtcata atcccgctgg agatcaatca tttcctgata ggtattgcga
    16681 aggttgacca tacccttaat acgagcaacc tccttatccg acaaggatcc ctcgtaaaag
    16741 actgttttct tgtaaagtcc cttgtgtcgt cctgtcttcg tcgcttcttt ggacaggtaa
    16801 acatcaacag ctgtctcatc ggtcacagtc aaagccacaa aacggtcaat ggttgcttga
    16861 gagtatttgg aatcccaagc cacaaactca cccgcgtcat tgatatagta gctgatttct
    16921 tctgtcttag cccctactcg aatcccatca cggtctcgat agtaaacagt atctccctca
    16981 tagccgaaac tatagagttc aaggctatcc caaattcttt gtggaatgct tttatccacc
    17041 tttttctcca tcagaacttg ggattggata aagatgttgt ccttaacttg tggaagtgat
    17101 acctgcttca aggcctcctt caactctagc aacaagtctt gtccgcttcc cttcaaggac
    17161 agcgttccac cattgaaatt tttgacctca taagttccta gaacttgagg attatcctca
    17221 ccgtcaaagt agggattgag ccaaatacgg tcatccgtgg cataccgctt acttcctgaa
    17281 aaagtaatcg tttcatcagt caccgactta tctaagtcct tttggaagaa gagaatatcc
    17341 gtcgtaacac tcgttcctgc gatagcctta aaggccgaat cgggcagacg gaccccaccc
    17401 aaaaactggg tcgtgtcctt gatgtcctgc aagacattat caacccgctt atccattgtt
    17461 cccgttgagg aaataaccgc cacttgccca gcgtcatgaa ccaagtccaa ggactttttg
    17521 ataaagtagt catgaatcat ataaggcttg tcataacggt tatccgcaat cctgaaattc
    17581 ccaaaaggaa tattagaaat aaccaggtca aaactatcgg tctgaaaagg cacatcctca
    17641 aagccctgaa ggaaaatggt ggtattgggg tgaagctgct ttgcaatagc tcctgtaatg
    17701 ccatctaact ccacaccgta aaggtcgcac ttctctgtta actgagctgg catagccgaa
    17761 aagaaattcc cagtccccat agaggggtct agcacacgac cacctctaaa accatctgag
    17821 accagtttct cccacatggc tctaatgatg gctgggtcgg tataataagc agtcagagaa
    17881 ctctgcttca tattggagta ttccttatcc gataccaaac ttttgagttc tgctcgttct
    17941 tcttcaaact gaggattgta gtc
//
LOCUS       DASFQD010000039        17779 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.039, whole genome shotgun sequence.
ACCESSION   DASFQD010000039 DASFQD010000000
VERSION     DASFQD010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 17779)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17779)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17779
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.039"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..170)
                     /locus_tag="U1021_001007"
     CDS             complement(<1..170)
                     /locus_tag="U1021_001007"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711558.1"
                     /translation="MAYKVIRPFKDLTDPNKHDYALDETYPRDGHKPSDEFIQGLLTG
                     SNSAGSIFLATI"
     gene            complement(183..1352)
                     /locus_tag="U1021_001008"
     CDS             complement(183..1352)
                     /locus_tag="U1021_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001030356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HEM4711559.1"
                     /translation="MNKALIFGARMRAKAAKVVELEESIKDLQKRTALEAEKLERAET
                     EEEVSAVEKDLEELQAELESKEAEKAELEKEIEDLQKQIDEQNRKAPRYGDSRGGKKD
                     MDKETREAFNHYLRTKGQMRDGFKSTEGEALIPEDLLRPKEAKRDETDLTSLVNVVKV
                     RNASGKWSVIKLTDQVMNTIEELAENPDLAKPTFTKVSYEVETRRGHLPVSQELIDDA
                     DYDVMGLVAKQAMNQERITKNTEIAKVLKKATAKNASGLDGLKDILNIELKPYYNASI
                     VATQSLFAALDKIKDKDGRYMLQTDITSPTGYKFAGRVIYVYPDDVIGTSKGDMKAFI
                     GDVTEFATLFDRAQTTVKWQDDKIYGQYLATANRFDVEVVDADAGFYVTYTDAVL"
     gene            complement(1349..1927)
                     /locus_tag="U1021_001009"
     CDS             complement(1349..1927)
                     /locus_tag="U1021_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001172113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HEM4711560.1"
                     /translation="MQKRKSYMATQFQTREEQESGDLILSGYFIKFDEETELWPGYFE
                     VIKREGVEKAIKDADIRALFNHDHSLVLGRTGNETVRLGVDDVGLFGDIIINKDDPQA
                     VGAYARVQRGDVIGCSFGFFPIKINTVERDDGTYLDTILDLEIFEVSPCTFPAYPQTE
                     IAARQKDFESQLRANREMLDKRKKEIKEKFKL"
     gene            complement(1914..3116)
                     /locus_tag="U1021_001010"
     CDS             complement(1914..3116)
                     /locus_tag="U1021_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016356236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEM4711561.1"
                     /translation="MGFFDRFRKRSKSQSTVSMLSHSDFGIIFEGDGYVPLARNPDVI
                     LAVNKIADMVSNMTIHLMENTDKGDIRIKDGLARKIDINPCAHMTRKTWIFKIVRDLL
                     LYGDGNSVLHVEYDPVTDYILNLRPFPMDEVSFKSNDLDYVICYKGREYEPDDVVHFA
                     INPDPDSPYVGTGYRLALKDIVRNLNLATQTKKGFMSGKNVPSLIVKVDSSSDELGSQ
                     EGRDRIAKKYLSTSQSGEPWIIPDALMEVEQVKPLNLNDIALNESVEIDKKTVAGLLG
                     VPAFILGVGDFNKEEYNNFVNTTIMSIATTITQTLTRDLLVSSNRYFKFNPRSLYSYD
                     ITELSTVAQQMTNSAAMRRNEWRDWVGMTPDPEMDDIIVLENYLPQGELGNQSKLNKE
                     GGNTDAET"
     gene            complement(3134..3352)
                     /locus_tag="U1021_001011"
     CDS             complement(3134..3352)
                     /locus_tag="U1021_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001002923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711562.1"
                     /translation="MREIVLSEHDIKVLINKGKVRVMLEGEEILVRESYRKDLRAEVI
                     KWDKEIVDVSQDIVRNMPFNSLFQGAAR"
     gene            complement(3360..5135)
                     /locus_tag="U1021_001012"
     CDS             complement(3360..5135)
                     /locus_tag="U1021_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016356235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HEM4711563.1"
                     /translation="MDKDFEKRFADFRHATTNLGKAKAYVDYVLSYQEEHNEERILAV
                     ERFLRDLENPAYELDEDIVDFAVHFIENSIVHQQGDDMYAMSIRNKPLILQPWQHFTV
                     VNLFGFYHAGTNERRFKEALIMLARKNGKTSFTAAIALLYQILDADSGSKCYIVANSV
                     KQALEAFNFIKFNVERWNDKSIRIKDNNQEHSITANFGDDGSFYIQALANDESRLDSL
                     NGNVTVIDEAHTMRNSKKYGLMKKTMSAYRNSMLFVISTAGDIPTGFLANRLKYCQKV
                     LKQLISDESLFIFICKANQTTDGDVGDYLDDNVLKMANPSWGVTVSMPALRAEAEQAM
                     NDPQTRNEFFNKTLNVFTNSMNAYFNPDEFIASDDCYDWSLEELARLPIKWYGGADLS
                     RLHDLTAAALYGIYNDGEKDIDICITHAFFPRVNAQKKANDDGIPLFGWQSDGWLTMS
                     NTPTVLYDDIVKWFIEMRQKGFKIAAVGMDRKFGREFLSKMKKAKFKMIDQPQLFYLK
                     SEGFRRIEFKVKNREFYYLHSEAYEYCVSNVRAIEKVDDAVQYEKLDGDGGTARIDLF
                     DASVFACIQALANLGKNQSVMEFFD"
     gene            complement(5128..5517)
                     /locus_tag="U1021_001013"
     CDS             complement(5128..5517)
                     /locus_tag="U1021_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001118284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P27 family phage terminase small subunit"
                     /protein_id="HEM4711564.1"
                     /translation="MAKPITVKSIKSKVVKQMKDLGTYRKEFEMIIDIFAGMLFQYQK
                     LAQDYADMGYPVTDVYVNKAGAENERKVPILTAMEILRKDILSYSNQLMLNPKSLGEV
                     VEQDKGSPLTEVMKLKDELKKKRVKDG"
     gene            complement(5628..5960)
                     /locus_tag="U1021_001014"
     CDS             complement(5628..5960)
                     /locus_tag="U1021_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016356233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEM4711565.1"
                     /translation="MAHYYKPVRQSLKTKKWEKFRDKMMRKSDYLCQESLRYGLSVPA
                     EMIHHIFPVSEYPELEFVEWNCLALTNRKHNTFHDRVNNKVVGQGIYWQKKRKKEFQK
                     FYGYPPTF"
     gene            complement(6087..6266)
                     /locus_tag="U1021_001015"
     CDS             complement(6087..6266)
                     /locus_tag="U1021_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000589102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711566.1"
                     /translation="MIKEYRDRQHGLNAIDQLNNDIKNNPGIGFEIVGYQNTVIKTYY
                     NLLVTSILVRRETFF"
     gene            complement(6441..6983)
                     /locus_tag="U1021_001016"
     CDS             complement(6441..6983)
                     /locus_tag="U1021_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000397549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEM4711567.1"
                     /translation="MNRMDPITDRDVIHEIEDYLREWNEMYYLLFETALYTGYRITDI
                     LNIRVRDVQGWDIKLRERKTQKLREVRMTPELKKSMRAFVKGKPLNHFVFKSRQGKNK
                     PISRQRFDQILKHVATELDIDNIAAHSIRKTFGFFYYQKFDGVNDLMTIFNHSSERTT
                     LIYIGDKQVTFKKNMAKFKI"
     gene            complement(7175..7576)
                     /locus_tag="U1021_001017"
     CDS             complement(7175..7576)
                     /locus_tag="U1021_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000736386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM4711568.1"
                     /translation="MKKLSDRELKTLDEELFKFRGIQRTIDLRRLELTTRNPDSQGGP
                     SIGISKPTETIAVKLADDPTLKFLEGFKEIVDKLLANLIDEDKEIFNLRWQYPQLRWE
                     EIADQKFMSRATVYRRRRIILEQYAILKGEL"
     gene            complement(7790..7957)
                     /locus_tag="U1021_001018"
     CDS             complement(7790..7957)
                     /locus_tag="U1021_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002324923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711569.1"
                     /translation="MYLKYKQMQIVKHALQHYIKREGASEHDVMVEQNLLKKVTQEID
                     DFKENVMKRTS"
     gene            complement(7948..8223)
                     /locus_tag="U1021_001019"
     CDS             complement(7948..8223)
                     /locus_tag="U1021_001019"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711570.1"
                     /translation="MSLNGIRLLPDYGCKIEIDVVQLLKENEFLKDELYNRAYKDIER
                     QEIEIETLKDKCVDLMLENADYVWDEMARVTAKKRANTRKWRAKACI"
     gene            complement(8440..8853)
                     /locus_tag="U1021_001020"
     CDS             complement(8440..8853)
                     /locus_tag="U1021_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007519064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711571.1"
                     /translation="MNTELMNELKELLGLFPMSYINANLEVILIPKTNTYFSLEGVES
                     RRDIIAKLLMWCSRTIAKGQPFKSEKRNCLFREFTKNFLNRYLGTLFSDEDMVLIYQR
                     LGNGINPELTYRFIDSGFDMEVLDDDQRCPIHTET"
     gene            complement(8948..9166)
                     /locus_tag="U1021_001021"
     CDS             complement(8948..9166)
                     /locus_tag="U1021_001021"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711572.1"
                     /translation="MEGLDKVKRVILKHGLKQDNPFVRDVRHSTTGLEIFYGNERQAF
                     RYANWQVGVVMTKQLYLHGNFKIIEVED"
     gene            complement(9154..9954)
                     /locus_tag="U1021_001022"
     CDS             complement(9154..9954)
                     /locus_tag="U1021_001022"
                     /inference="COORDINATES: protein motif:HMM:TIGR01446.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001185495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage replisome organizer N-terminal
                     domain-containing protein"
                     /protein_id="HEM4711573.1"
                     /translation="MANANKRYYWIQLAQDFFKSKEMKLLRKIAGGDTHTIIYLKMML
                     LSLEDNGILFFDGVADNLAEEIALVIDEDVENVKITLVFLQSKKLLSKISDREYFLEQ
                     VPEMVGSETASARRVRKHRENQKVLQSNSDVTNGNGEKEKEQEKDIDTNLSSSSCINN
                     SDYSIKQLFKDFEAGFGRLLSPFEIEDIQKFATEEGLSPELIREALKEGVFRNKPVWN
                     YIKAILRNWKNDKLLTVELVRARQQEQELPKNVDVSPEFLEAMNLWKD"
     gene            complement(9938..10114)
                     /locus_tag="U1021_001023"
     CDS             complement(9938..10114)
                     /locus_tag="U1021_001023"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711574.1"
                     /translation="MVWIVAKKTKTKRGYRFYQKRSFDTWQKARIYQQDLFNKDVNAE
                     MWEENGGIEIGKCK"
     gene            complement(10117..10371)
                     /locus_tag="U1021_001024"
     CDS             complement(10117..10371)
                     /locus_tag="U1021_001024"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711575.1"
                     /translation="MKFWDMMKKFLSVEDDDYIPQDQHELERELAYERYRVKEFKKLA
                     DLKEQECVGKARLIQELNRRIEYLEKVNRCQAELLADREV"
     gene            complement(10373..10561)
                     /locus_tag="U1021_001025"
     CDS             complement(10373..10561)
                     /locus_tag="U1021_001025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711576.1"
                     /translation="MTEELMLTTEQGLALIAILTIILIWLIRKPVEIEIEVKEPIVEE
                     KQPERNLRYLQIHRYYGG"
     gene            complement(10558..10842)
                     /locus_tag="U1021_001026"
     CDS             complement(10558..10842)
                     /locus_tag="U1021_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEM4711577.1"
                     /translation="MNDLMIQMLDQFEAGLMDRALKVMHVVMDEKRRYPMELNKSQCA
                     EMLLGTKDTGSFDARFNCHKDFPRIPNAREKYPRDAVIEWYHNNWQRTAI"
     gene            complement(10903..11610)
                     /locus_tag="U1021_001027"
     CDS             complement(10903..11610)
                     /locus_tag="U1021_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001002368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6C domain-containing protein"
                     /protein_id="HEM4711578.1"
                     /translation="MNEIFVFHGQEVRTVTINNEPWFVGKDVADILGYQNPQKAIRDH
                     VDFEDKLTEQIVQSGQNREMIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPQIRQQ
                     GAYVPENLSDEAFIALFTGQKKLKEQQLALAQDVDYLKNEQPIHPSFAQALLKKRKAR
                     VVACLGGMDSPAYADKVFAQSVFRQAEVDFKDHFNINRYDMLPKKFADAALSYWMTWE
                     PSTNTKMKILEMNAYEL"
     gene            11664..12095
                     /locus_tag="U1021_001028"
     CDS             11664..12095
                     /locus_tag="U1021_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000456432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711579.1"
                     /translation="MDYAIFIQPAISIVVAIISGVWSYLASRANNKTEIEKQAKEHAH
                     AVEKLEKEFQYQLSTLKQQHSLEIEKLKQSHELRLQELEKVSSLDAEKDKALKLNEFA
                     FKALTGEVDLDKALAVNDKVNAYNRKQSLQEQFIQKTSKKS"
     gene            complement(12375..12572)
                     /locus_tag="U1021_001029"
     CDS             complement(12375..12572)
                     /locus_tag="U1021_001029"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711580.1"
                     /translation="MKIAEKVVRIESDAYEYVVDFANEHDLKIGEAVSILIRYCASKD
                     LIVKQAHVEVVEVQNVVEEDD"
     gene            complement(12577..12789)
                     /locus_tag="U1021_001030"
     CDS             complement(12577..12789)
                     /locus_tag="U1021_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011054420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM4711581.1"
                     /translation="MSQQHQKWIDLVKKRLHERGWSQSDFAIVLGVSPAMVTRLLKEG
                     HGSDDLKLKVNKKLRISESWESFEEE"
     gene            12851..13057
                     /locus_tag="U1021_001031"
     CDS             12851..13057
                     /locus_tag="U1021_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000808564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711582.1"
                     /translation="MKQFILDCIGDRDDFTITITFSNGDKIDFFQVYDDCSETANAID
                     LVEVGTDFRHLVNLDYVVHVRLNV"
     gene            complement(13069..13269)
                     /locus_tag="U1021_001032"
     CDS             complement(13069..13269)
                     /locus_tag="U1021_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001003192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711583.1"
                     /translation="MEEIIERHFENMVDEILLSSETYEEAISSLKKISVLGIHQPGSL
                     IKSLEIAIKRRACQQKTPNHKD"
     gene            complement(13433..13699)
                     /locus_tag="U1021_001033"
                     /pseudo
     CDS             complement(13433..13699)
                     /locus_tag="U1021_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011017354.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            13779..13967
                     /locus_tag="U1021_001034"
     CDS             13779..13967
                     /locus_tag="U1021_001034"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711584.1"
                     /translation="MIINPETFALAVVQSSDSALTVVEKLELFKEAYQTAKKHNQPII
                     DAENKQKAESARNFLKNW"
     gene            complement(13942..14127)
                     /locus_tag="U1021_001035"
     CDS             complement(13942..14127)
                     /locus_tag="U1021_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014635531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711585.1"
                     /translation="MDEQETKFLCKLNVMLLDIEQAYEAEKDPLTRCELAKGYLEIGK
                     YLKSMGFITPTNFSKSS"
     gene            14417..14776
                     /locus_tag="U1021_001036"
     CDS             14417..14776
                     /locus_tag="U1021_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009730587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4711586.1"
                     /translation="MSITFDRIKELAKKQGLSINSLEEKLGYSRNTLYSLKKQNASTD
                     RMQEIADYLNVSLDYLLGRTDNPRIASDEPEKFYFEGKEVDVEHLASTAMRFNGKPLS
                     DEDKKAIQNIIEIYLRK"
     gene            14786..15007
                     /locus_tag="U1021_001037"
     CDS             14786..15007
                     /locus_tag="U1021_001037"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HEM4711587.1"
                     /translation="MTTLTLNTTPHQDNLIAEYLKEHNTKLDDLVTEMLLEKLEDEAD
                     LKALRKAQSEDDGTRYTLSEVAKELGFAI"
     gene            14997..15272
                     /locus_tag="U1021_001038"
     CDS             14997..15272
                     /locus_tag="U1021_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002334253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEM4711588.1"
                     /translation="MQYKVNLTKKAVKQLKKLDKHIAREIYNWIVDNLDGCTNPRQHG
                     KGLVGDRSGEWRYRVGNYRIIATIHDDIVTIEVFQIEHRSTVYKLKR"
     gene            15287..15667
                     /locus_tag="U1021_001039"
     CDS             15287..15667
                     /locus_tag="U1021_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000762727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HEM4711589.1"
                     /translation="MTEKELFEEFGVKIEIYENQLFEDEAFYIPELLTMFLSDAIPET
                     KRVQVTLHELGHKGHMPHIYRMFREKCELEANRNMIHHLLKEELEIAEDHTQFNYLVF
                     MEKYKLKTIADETMVKEEYLNLVG"
     gene            15677..16420
                     /locus_tag="U1021_001040"
     CDS             15677..16420
                     /locus_tag="U1021_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011017351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEM4711590.1"
                     /translation="MNKNQIENLEKLTTSTDKMKQLTEENPNHFKTSRLGQSMTNYST
                     QLEREINGKRRRNRVFPYGTLVYVDFGINFGSEFSAPHYAITLSKEDRKNQNTITVIP
                     LTSKPGYNNLPLEFNLAEALGMLTAQLIEAAEDKVASELVSYFGEYDDFDELMIELEK
                     EGRLDEKERAMNLVQKLSDEVVYAGKRLEKYMSDLEKTTYAKLDAITTIDKVKIFKKV
                     STLDGLGVAQILEPQMKILSDEIKSRYLI"
     gene            16677..17762
                     /locus_tag="U1021_001041"
     CDS             16677..17762
                     /locus_tag="U1021_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019291329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4711591.1"
                     /translation="MAFYKKLSSGWQYRVSYKDANGKYREKSKKGFKTKSQAQAAAME
                     LELFLKKNTFVNKDQSLLEYYEKWAKIYKKPHVAERTWKKYQQTEKHIKQYFGNTLLK
                     DITPTHYQSIANKFTQKYSQETADNFHYHIQSAVKVAVREKIIDTNFCEGAIVKSNLN
                     RKSVEDKYLEEHEYLHLIDMCKDNIQYHSYFTIYLAAVTGLRFGELLGLRLEDIDKKG
                     QMLHLKQAFDYTFTMDFIPLKSKSSERSVPIDQHTLKLIQAYLKNQKEPNKDNRLIPN
                     ISNAAVNKTIKKIVGRPVTIHSLRHTYASFLIAQGVDLISVSQILGHENLNITLKIYA
                     HQLDKLKEKNNDKIRNIFDNFGRISDE"
BASE COUNT         5239 a         3981 c         3028 g         5531 t
ORIGIN      
        1 tcgattgtag ccaaaaagat tgacccagct gaatttgatc cagtcagcaa accttggatg
       61 aactcatccg aaggtttgtg gccatcacga gggtaggttt catccaaagc ataatcatgc
      121 ttgtttgggt ctgttaagtc cttgaaagga cggataactt tgtaagccat taactacctc
      181 ctttacaaaa cagcgtctgt gtaagtcaca tagaaaccag cgtcagcatc gacaacctct
      241 acatcgaaac ggttagcagt tgctaaatac tgaccataga ttttatcatc ctgccatttc
      301 acagtagttt gggcgcggtc aaataacgtt gcaaactctg tcacatcccc gatgaatgct
      361 ttcatatcac cttttgaagt gccaataaca tcatctggat aaacataaat cacacgacca
      421 gcaaacttgt acccagtagg agaggtaata tccgtctgca acatatatcg accgtcttta
      481 tccttaattt tatccaaagc tgcgaaaaga gactgggtag ctacaatact agcattgtag
      541 tatggtttca attcaatatt taaaatatct ttcaaaccat caagtccaga tgcatttttt
      601 gcagttgctt tcttcaatac tttcgcaatt tcggtgttct tagtgatacg ttcctgattc
      661 attgcctgct tagcgacaag ccccatcaca tcataatcag cgtcatcaat caattcttga
      721 gaaactggca aatgaccacg acgagtttca acctcatatg aaacttttgt gaaggtaggt
      781 tttgctaagt caggattctc agctaactcc tcaatcgtat tcatgacctg gtcagtcaac
      841 ttaatcacag accacttacc gcttgcattg cgtactttaa caacgtttac caaggatgtc
      901 aaatctgtct catcgcgttt agcttcttta ggacgaagca aatcttctgg gattagggcc
      961 tctccttcag tagacttaaa tccgtcacgc atttgcccct tggttcgcaa atagtgatta
     1021 aatgcttcac gagtttcttt gtccatgtct ttcttacctc ctcgactgtc tccatagcgt
     1081 ggagctttgc ggttttgttc atcgatttgc ttttgaaggt cctcgatttc cttttccaat
     1141 tcagcctttt cagcttcttt ggattccagt tctgcttgaa gttcttcaag atctttctca
     1201 acagctgaca cttcttcctc agtctcagca cgttccaact tctctgcttc aagagcagta
     1261 cgtttctgca agtccttgat ggactcttca agttcaacta ctttcgcagc tttagctcgc
     1321 atacgagcac caaaaattag agctttattc ataacttaaa tttctccttt atttcttttt
     1381 ttcgcttatc aagcatttca cgatttgcac gtagttgact ttcaaagtcc ttctgacgtg
     1441 cagcaatttc agtctgtgga tatgctggga aagtacaagg actaacttca aagatttcaa
     1501 ggtctaagat agtgtccagg taagtaccgt catcacgctc taccgtgttg attttgattg
     1561 ggaagaagcc aaaactacaa ccaatcacat ccccacgttg aacacgagca taagcaccga
     1621 ccgcttgtgg gtcatcctta ttgatgataa tatcgccaaa cagaccaaca tcatcaacac
     1681 cgagccgcac tgtttcattt ccagtccgac caagtaccaa actatggtca tggttaaata
     1741 aggcacggat gtcggcatct ttaatagcct tctcaacacc ctcacgctta atcacttcaa
     1801 aataaccagg ccaaagttca gtctcttcat caaacttgat aaagtagcca ctcaaaatca
     1861 aatcgccaga ctcttgttcc tcacgagttt gaaattgcgt ggccatgtaa gacttacgtt
     1921 tctgcatcgg tattccctcc ttccttgttt aatttgctct gattgcctaa ctcaccctgc
     1981 ggcagatagt tttcaagaac aatgatgtca tccatttcag gatcaggagt catgccaacc
     2041 caatctctcc actcattccg acgcatagca gcactgtttg tcatctgttg agcaacagtt
     2101 gacaactctg taatgtcgta agaatagagt gaccgtggat tgaacttgaa atagcgattg
     2161 ctagacacta gcaagtccct tgtcagtgtc tgagtgatcg ttgtagcaat gctcatgatg
     2221 gtggtattga caaagttgtt gtattcttct ttgttgaagt ctccaacacc caggataaaa
     2281 gctggcactc ccaaaagtcc agccactgtt ttcttgtcaa tctcaaccga ttcattgaga
     2341 gcgatgtcgt tcagattcaa tggtttgact tgctcaactt ccataagagc atcaggtata
     2401 atccacggct ctcctgactg gctagtggat agatacttct tagcaatcct gtcacggcct
     2461 tcttgactgc ccaactcatc actggatgaa tcgaccttga caatcaagct cggaacattc
     2521 ttgccactca taaagccttt cttggtctga gtagccaagt ttaggttgcg gacaatgtcc
     2581 ttcaaagcca gccgataccc tgttccgaca taagggctgt ctggatcagg attgattgca
     2641 aagtggacaa catcatctgg ctcgtattct ctacccttgt agcaaatcac gtagtctaaa
     2701 tcattggact taaaagagac ctcatccatc gggaagggtc tcaagttcaa aatatagtct
     2761 gtcacagggt catattcgac atgaaggaca gaattaccgt cgccatatag caacaagtca
     2821 cgcacaatct tgaaaatcca agtctttctg gtcatgtgtg cacaaggatt gatgtcaatc
     2881 ttccgagcca agccgtcctt gatacgaata tcacccttgt ctgtattctc catcagatgt
     2941 atggtcatat tcgacaccat atcagcaatc ttgttgacag ccaatatcac atcaggattc
     3001 ctagcaagtg gcacataacc atcaccctca aagataattc caaaatccga gtgactaagc
     3061 atactcaccg ttgactgcga cttgctcctc ttacggaacc tatcaaagaa acccattctt
     3121 tctcacctcc tttctaccgt gcagctcctt gaaagagtga attaaagggc atatttctta
     3181 caatgtcctg actgacatcg actatctctt tatcccactt gatgacctca gctctgaggt
     3241 cttttctgta tgactcacga accaaaatct cctcaccttc aagcattact cttacttttc
     3301 ctttgttgat taacactttg atgtcgtgtt cagataaaac aatttctctc atggtccacc
     3361 taatcaaaga attccatcac actctggttc ttgccgagat tagcaagagc ctggatacat
     3421 gcaaagacac tggcatcaaa taagtcaatc cttgctgtac caccgtcacc gtctaatttc
     3481 tcatattgca ccgcatcatc caccttctca atcgctctga cattgctgac acagtattca
     3541 taggcctcag aatgaagata gtaaaattct ctattcttaa ccttgaactc aatccgtctg
     3601 aagccttctg atttcagata gaaaagctgt ggctggtcaa tcatcttgaa cttagccttt
     3661 ttcattttac tcaaaaactc acgaccaaac tttctatcca taccgacagc agcaatcttg
     3721 aagcctttct gcctcatctc gatgaaccat ttgacaatat catcatagag aacagtcggc
     3781 gtgttactca tggtcagcca accgtctgac tgccaaccaa agagcggaat gccgtcatca
     3841 ttagctttct tctgagcatt gacgcgaggg aagaaagcgt gagtgataca gatgtcaatg
     3901 tctttctcac cgtcattgta gatgccatag agtgcagcag cggtcaagtc atgcaagcgg
     3961 gacaagtccg ccccaccata ccacttaatc ggcaagcgtg ccagctcttc caagctccaa
     4021 tcataacaat catcactagc gataaactca tcaggattga aataggcatt catagagtta
     4081 gtaaagacat tcaaagtctt attgaaaaac tcattccttg tctgaggatc gttcattgct
     4141 tgttcagctt cagctctcaa ggctggcatg gacaccgtga caccccatga agggttagcc
     4201 atcttcaaaa cattgtcatc cagatagtct ccaacatctc catccgtcgt ctggttagcc
     4261 ttgcagataa aaatgaatag cgattcatca ctgattaact gcttgaggac cttctgacag
     4321 tatttcagcc tgttagcaag gaatcctgtt ggaatatccc cagctgtaga gataacaaaa
     4381 agcatactgt ttcggtatgc tgacattgtt ttcttcatga gaccatactt cttggaattt
     4441 cgcatggtgt gggcctcatc aataacggtg acgttgccat tcagagagtc caagcgactc
     4501 tcatcattgg ccaaggcttg tatataaaac gaaccatcat ctccaaagtt agctgtgatg
     4561 gagtgttcct ggttgttatc cttgatacga atagacttgt cattccaacg ctccacgttg
     4621 aacttgataa agttgaatgc ttccaaggcc tgcttgactg aatttgccac aatgtagcat
     4681 tttgacccac tatcagcatc caaaatctga taaagcagag caatagcagc agtaaaactg
     4741 gtcttaccgt ttttgcgtgc cagcattatc aaggcttcct tgaacctacg ctcatttgtc
     4801 ccagcgtgat agaaaccaaa gaggttgaca actgtgaagt gttgccacgg ttgcaaaatc
     4861 aaaggcttgt tacggataga catggcatac atgtcatctc cttgctggtg gactatagag
     4921 ttctcgatga agtgaacagc aaagtccact atatcctcat caagttcata ggctggattt
     4981 tctaaatccc tcagaaagcg ttcaacagcc aaaatccgtt cttcgttatg ttcctcttga
     5041 tagctcagga cataatcaac ataggcttta gcttttccaa gattggttgt agcatggcga
     5101 aaatcggcaa aacgtttttc aaagtcttta tccatctttc acccgcttct ttttcagttc
     5161 atccttgagc ttcatcacct ctgttagtgg cgagcctttg tcttgttcga ccacctcacc
     5221 caatgatttt gggttaagca taagctggtt tgaatagctc aagatgtctt ttctgagtat
     5281 ttccattgca gtcaagattg gaactttacg ctcattctca gcaccagctt tgttgacata
     5341 gacatctgtg acaggatagc ccatgtcagc atagtcttga gctagtttct ggtactgaaa
     5401 caacatccca gcaaagatat caatgatcat ttcaaattct tttcgatagg tgcccaagtc
     5461 tttcatttgc ttgaccactt ttgacttgat tgacttcact gtaattggtt tagccaaaaa
     5521 ctaaccccct ttctacaaaa tcgctgagtt tttaccccct ttttgtctga cggctcccga
     5581 cttggaaaaa gttcccttca ccggttccca ggacgctcaa gaatatttca aaaagtgggg
     5641 gggtatccat aaaatttttg aaattccttc tttctctttt tttgccaata aattccctgg
     5701 ccgacaacct tattattgac tctatcatga aatgtattat gtttgcgatt ggttaacgct
     5761 aaacaattcc attctacgaa ttcaagctca ggatattcag acacaggaaa gatatgatga
     5821 atcatttcag ctggtaccga caaaccgtac ctcaaacttt cttgacatag gtagtcagac
     5881 ttcctcatca tcttgtctcg gaacttttcc cacttcttag tcttcaagga ttgtctgact
     5941 ggcttgtaat aatgtgccat acgctcctcc ttgtcaatac aaaaaggaca agtcaacgac
     6001 ctgtccctct catacaagaa atctatggta ccataataaa ctctttttcg tgagaaaaca
     6061 agtacccttt tttctcattt tgaatcttag aaaaaagttt cccgcctaac aagaattgat
     6121 gtcaccaata aattataata tgtctttatc actgtgtttt gatatccgac tatttcaaaa
     6181 ccaattcctg gattattttt gatgtcattg tttaactggt cgatagcgtt caatccatgt
     6241 tgtctatcac gatattcttt tatcattctg tacctccaaa aactatacca atttgcccct
     6301 tgagtttgtc atactgtata ttctgttaaa ctcagcgaaa gcccttggat tgttgatata
     6361 attgcacctg ttaagatttt tatttttaag tttgacaact tttcaatatg acaaacttag
     6421 tagctaaaaa ataaaaagag tcagatttta aacttagcca tattcttctt gaaagtgact
     6481 tgtttgtctc cgatgtaaat aagcgtagtt cgttctgacg agtggttgaa tattgtcatt
     6541 aaatcgttaa ctccatcaaa tttctggtaa tagaaaaaac caaatgtctt tctgattgag
     6601 tgtgcagcta tgttgtcgat atctagctct gtggcaacgt gcttcagtat ctggtcgaat
     6661 cgctgtctgc tgattggctt attcttccct tgtctgctct taaatacaaa gtgattaaga
     6721 ggtttccctt taacgaaagc acgcatggat tttttgagtt ctggagtcat tctgacttca
     6781 cgtagtttct gggtctttct ttccctgagc tttatatccc aaccttgcac atcccttact
     6841 cttatgttca ggatatctgt gattctgtat ccagtataca aagctgtttc aaagagtagg
     6901 taatacatct cattccattc tctcaaataa tcttcgattt catggataac atctctgtcg
     6961 gtaattggat ccattctgtt catgttctca cctcctttca gctaaacgaa aaagccagcc
     7021 ttaatgactg acttgctata acttctgttg aaacaactct ttctttaaaa attaaggata
     7081 tctcccagaa tgttgactgc gttttgtttc cagaagttca tgctacaata ataaatcgtt
     7141 ttctgtgaga atacaaggta ctttttttct cattttacaa ctcacccttc aatattgcgt
     7201 attgctccaa aatgattctt ctacgacggt agacggtagc acggctcatg aacttctggt
     7261 ctgcaatttc ttcccagcgt aattgtgggt actgccagcg tagattaaag atttccttgt
     7321 cttcgtcgat taggttagca agtagcttgt ccacaatctc cttgaaacct tccaagaact
     7381 tcaatgtcgg atcatctgcg agcttgacag cgatggtttc tgtaggtttg ctgattccga
     7441 ttgaaggacc gccttggctg tctggatttc ttgttgtcaa ctccagtctt cgtaaatcta
     7501 tggttcgctg gatacctcgg aacttgaaca attcctcgtc tagcgttttg agttctctgt
     7561 cgctcagttt cttcaattgt cacctccaaa ttcttgaaaa atgccactaa gacatcaaaa
     7621 atataagcaa tggtttttcc tgttttccta attgcaatag ttacagtatt ccggacctct
     7681 tcaaactgtt caggagttag ctgagccaat tcttgagcta gtctttcttg ctcacgctgt
     7741 aaagcctgct tagctttctt tttcttgatt ctcttgttca tgcgtaacct caagatgttc
     7801 ttttcatcac attctcttta aagtcatcaa tttcttgcgt gacctttttt aaaagatttt
     7861 gttcaaccat tacatcatgt tcgctagcac cttccctttt gatgtagtgc tgcaaagcat
     7921 gtttaacaat ttgcatttgc ttgtacttca aatacatgcc ttcgccctcc attttctagt
     7981 attagccctt ttcttggctg ttactctagc catttcgtcc cagacatagt cggcattttc
     8041 aagcatgagg tccacgcatt tgtcttttag ggtctcgatt tcaatttctt gtcgctcgat
     8101 gtctttgtat gcacggttgt aaagttcatc tttcaggaac tcattttctt tgagcaactg
     8161 aactacatca atttcaatct tacatccata atctggtaac aatctaattc catttaaact
     8221 catttaatac ctcctgtaat ttttttaaag tgatttttac ataaatccat gccatgaaat
     8281 ctgtttgagc aactgtcaca gagcagctta tcacaagtaa gaaaccttgg ttgctgattt
     8341 ttaaataaac tgaaacttcg atagaatgtt attcctgtct gaccaattat aaaatcacac
     8401 aactttgttg ctcttctctt gtagcattca tggcatatat catgtttcgg tatgaattgg
     8461 acaacgttgg tcgtcatcta acacctccat atcaaatcca ctatcaataa atctatacgt
     8521 caattctgga ttgattccat tgcctaatct ttgataaatc aaaaccatat cttcatctga
     8581 aaaaagtgtt cctaggtaac gattaagaaa atttttggta aattctctaa aaagacaatt
     8641 ccgtttctca cttttaaatg gttgcccttt tgcaattgtc ctactgcacc acatcaataa
     8701 ttttgcaatg atgtctcttc gtgactctac tccttccaaa ctaaaatacg tgtttgtttt
     8761 tggaatcagt atcacttcca aattcgcatt tatatatgac atcggaaata agccgagcag
     8821 ttcttttagt tcattcatta gttcagtatt catttcttcc cctaacattc gtaattatag
     8881 gcaaaatata gattttcgcc tatcggatag taataaacgc catgaaaatc atcgccagct
     8941 tgtacattca gtcctccacc tctataattt taaaattccc atgcagatac aactgctttg
     9001 tcattacgac accaacctgc caatttgcgt accgaaaggc ctgacgctca ttgccataga
     9061 aaatttccaa accagttgtc gaatgcctca catcacggac aaaaggattg tcttgcttaa
     9121 gaccgtgttt cagaatgacc cgttttacct tgtctaatcc ttccataagt tcatagcctc
     9181 caaaaattca ggcgaaacat caacattctt aggcagttcc tgttcttgtt gcctagctcg
     9241 aacgagttct actgtcagta acttatcatt cttccaattt cgtaaaatcg ctttgatata
     9301 attccataca ggtttattgc gaaatacccc ttctttaaga gcttccctta ttaattcagg
     9361 gctaagccct tcttcagtag caaatttctg gatgtcctca atttcaaatg gacttaataa
     9421 tcttccaaag ccagcttcga aatctttgaa taattgcttg attgaataat cgctattatt
     9481 tatacaacta ctactagata agtttgtatc tatatctttc tcttgttctt tctctttctc
     9541 tccgttacca tttgttacat cactgttact ttgtaacacc ttttgattct cacgatgctt
     9601 gcgaacccta cgggcacttg cagtttcact acctaccatc tctgggactt gctccaaaaa
     9661 atactcccta tccgatattt ttgacaacag ttttttggac tgtaaaaaaa caagggtaat
     9721 ttttacattt tccacatctt cgtcaattac cagcgcaatt tcttcagcca agttatcagc
     9781 gaccccgtca aaaaatagaa tcccgttatc ttccaggctc aacagcatca tcttaagata
     9841 gataatcgtg tgagtgtccc ctcctgctat ttttcgaagc aacttcattt ccttggattt
     9901 gaagaaatcc tgtgcgagtt gaatccaata gtaccgctta tttgcatttg ccaatctcta
     9961 tacctccatt ctcctcccac atctcagcat ttacatcttt attaaacaag tcctgctgat
    10021 aaattctagc cttctgccag gtatcaaatg accgtttttg gtaaaatcta taaccacgct
    10081 tggtcttggt tttcttcgcc acaatccaga ccatagctag acctccctat ctgctaatag
    10141 ctcagcttgg catctgttaa ccttctctaa atactcaatc cgtctattta actcttggat
    10201 tagcctagct ttaccaacac attcctgttc tttcaggtct gccaacttct taaattcctt
    10261 gaccctatac ctttcgtatg ccaattcacg ttctagctcg tgctgatctt gaggaatgta
    10321 gtcatcatcc tcaacactca aaaacttttt catcatgtcc caaaatttca ttctatcctc
    10381 cgtaatatct gtggatttga agatatctca aattccgttc tggttgtttt tcttccacaa
    10441 ttggttcttt gacctcaatt tcaatctcaa caggctttcg gatcagccag attaagatta
    10501 tggtcaaaat agcaataagt gccaaacctt gttcagttgt caacatcaat tcttctgtca
    10561 tatcgctgtc ctctgccaat tattgtggta ccattctatg acggcatcac gagggtactt
    10621 ctcgcgagca ttcggaatcc gtgggaaatc tttgtgacaa ttaaaacgtg catcaaaact
    10681 ccctgtatcc tttgttccta agagcatttc cgcacattgt gacttattga gttccattgg
    10741 gtatcgtcgt ttttcgtcca tgacaacgtg catgaccttt aatgctctat ccattagccc
    10801 agcttcaaac tggtccaaca tttgaatcat tagatcattc atgatataat cctcttgtaa
    10861 tatttatttg tgagcctgat tgccgtcagg cttttttgcg ttttacaatt cataagcatt
    10921 catctccaaa atcttcattt tggtatttgt gcttggttcc cacgtcatcc aataggacaa
    10981 tgccgcatca gcaaatttct ttggcaacat atcatagcga ttgatgttga aatggtcttt
    11041 aaaatcaacc tcagcttgtc gaaagaccga ctgtgcaaag actttatcag cataggcagg
    11101 actgtccatt ccacctagac aagcgacgac acgagctttt ctcttcttca gcaaggcttg
    11161 agcaaagcta ggatgaattg gttgctcatt tttcagataa tcaacatctt gagccaatgc
    11221 caactgctgc tctttcagtt tcttctgccc agtaaataga gcgataaaag cctcatcaga
    11281 taaattttct ggcacataag ctccctgctg acgaatctga ggcaatacct cacttgtgac
    11341 ccaacgtttg aattcttttg cctggggcaa cttactggat aaaataagtg agtaaagacc
    11401 tgattcgttg atgataatca tttcacgatt ctgacctgac tgaacgattt gttctgtcag
    11461 cttatcttcg aaatcaacat gatctcgaat tgctttctgt ggattttgat agcctaaaat
    11521 gtcagctaca tcttttccaa caaaccaagg ctcgttgtta atggttacag tacggacttc
    11581 ttgcccgtga aaaacaaaaa tttcgttcat aaaattcctt tctaatttgg tataataaaa
    11641 ataaaaacga tcggagaatt ttcatggatt atgctatctt tattcaacct gctatcagta
    11701 tcgtagtagc aatcatttca ggtgtttggt catatcttgc ttctagggca aataataaga
    11761 ccgagattga aaaacaagcc aaagagcatg ctcatgccgt agaaaaactc gaaaaagagt
    11821 ttcagtatca gctcagtaca ctcaaacagc aacactctct tgaaattgaa aaattaaaac
    11881 aatcacacga gttaaggttg caagaacttg aaaaagtttc cagtcttgac gctgaaaagg
    11941 ataaagctct gaaattaaat gaatttgcat tcaaagcact aactggcgaa gttgatcttg
    12001 ataaagcact tgcagtaaat gacaaagtga acgcttataa tcgaaaacaa tcacttcagg
    12061 agcagttcat tcagaaaacc tctaagaaat cataaatcga actcttgtct aatcctatct
    12121 atctctttat catgccgatt ttgatattct tttatgcgtt tttgcctgtc tctcttagct
    12181 aagaaatagg ttccaaaacc aataaataaa ttgataaaaa ttacaaagta aaaccaaatt
    12241 aaaaaattca caccattccc ctccttattt ctccaagtgc caacacagtc tcccacacat
    12301 ctagcccctc gaggctatca actatcagtt gactgagttg gtagtttttc ttttgccagt
    12361 tctggattag tttgctagtc atcttcttcc accacattct gcacttccac aacctctaca
    12421 tgagcctgct tgactatcaa atctttagaa gcacagtagc gaattaagat gctcactgcc
    12481 tcgccaattt tcaaatcatg ctcattagca aaatctacaa cgtattcata cgcgtccgat
    12541 tcgatacgga ctactttttc agctattttc atgtttctac tcctcctcaa aactttccca
    12601 actctcagaa atcctgagtt tcttgtttac tttcaacttg aggtcatcgc taccatgccc
    12661 ctctttcagc aaacgagtaa ccatggctgg tgaaacacca agcacaatcg caaaatccga
    12721 ctgcgaccaa ccacgttcgt gtagtcgctt tttaaccaaa tcaatccatt tttgatgttg
    12781 ttgactcata ttttcccttt ctatttttgg tataattgac ttgaaatctt taatgaaagg
    12841 aggacaagtc atgaaacaat ttattctcga ttgtattggt gaccgtgatg attttacaat
    12901 cacaatcact ttctcaaacg gagacaagat tgactttttc caagtctatg acgactgctc
    12961 tgaaactgct aatgccatag accttgttga agtcggaaca gatttccgtc atctagtcaa
    13021 tcttgactac gttgttcacg ttcggctgaa cgtttgattt cttgacacct aatccttgtg
    13081 gttaggtgtt ttttgctgac aagccctacg cttaattgcg atttctaaac ttttgataag
    13141 actccctggc tgatgaatac ctaggaccga aatctttttc aagcttgaaa tagcttcttc
    13201 ataggtttct gacgaaagca aaatctcatc aaccatattc tcgaaatgtc tttcaatgat
    13261 ttcttccatc cctctctcct ttctaatttt gcattgcaac agaaggaaac actcattgct
    13321 gtcacagcct acactacttc tcttgagctg ttgaaagagt atcatgaatg gctgaaccaa
    13381 tagcctggac attttttgag cttagtggta aaacgccagc ctctttaatt tcatctccca
    13441 gcacaatctt gtgttgggac ttttcattgt caatataggc acttgccatt tttctaactc
    13501 gacttgcaac catctcgcaa atcgtggctg tttctactgg aagatctgga tacttatcaa
    13561 aatgaaacgt acgagtttcc aattcggaca agttatcaca ctccttcaaa agttccagaa
    13621 atgccgattc agcaatggta tcaataagtt tgacagttgt ttcaatggca ggtaaaaaat
    13681 ctgttgtgag ttttttcatt cccttctcct ttctattctt gttcccctcc ccaatccatg
    13741 ctataattta gctatcaaca cggaaaggag ggaaagctat gattatcaat ccagaaacat
    13801 tcgctctggc tgttgtccag tcttctgatt cagcgttgac agtggttgaa aaacttgaat
    13861 tattcaaaga agcttatcaa actgccaaaa aacacaatca accaattatt gatgctgaaa
    13921 ataaacagaa agcagagtcc gctaggaact ttttgaaaaa ttggtaggcg taatgaaacc
    13981 catacttttc aaatactttc caatttctag atacccttta gcaagttcgc accttgttag
    14041 agggtctttt tccgcttcgt aagcctgttc aatgtccaat agcattacat ttagcttgca
    14101 aagaaatttt gtttcttgtt cgtccatccc cttctccttt cttttttata aaatagttaa
    14161 aaagttagta aaacccttga catttttaaa taaatcattt aaaatcaaag cataaagaaa
    14221 acgcttgata aaacccaatt caatcaatac attctgctcg ccaaagcttt tattttttga
    14281 attagttttt acttgtgtac ttactaactc tttaacttac aagaattatt ttaaattatt
    14341 tgcttaactt tgtcaactgt tttaaccgaa taatttaaat attttttgtc aatctcttag
    14401 aaaggttgat gtatcaatgt ctataacatt tgatagaata aaagagcttg ctaaaaaaca
    14461 aggtctttca attaactcac tagaagagaa actgggctat agtagaaata cactgtattc
    14521 gctgaaaaaa caaaatgcca gtacagacag aatgcaagaa attgccgact accttaatgt
    14581 ttctctagac tacctgctcg gacggacaga caacccacgg attgccagcg atgagcctga
    14641 aaagttttac tttgaaggaa aggaagttga tgttgagcac ttagctagca cagccatgcg
    14701 attcaacggt aagcctctat ctgatgaaga taagaaagca attcagaaca tcatcgaaat
    14761 ttatttaaga aagtgaggaa aagtgatgac aactttaaca ctaaatacaa caccacatca
    14821 agataacttg attgcggagt acctcaaaga acataacacc aaactagatg acttagtgac
    14881 agaaatgctc ctggaaaaac tagaagacga agccgacctc aaagccttac gaaaggcaca
    14941 atcagaagac gatggcacac gctacaccct atcagaagtc gcaaaggagt taggctttgc
    15001 aatataaggt aaacctgacc aaaaaagctg tcaaacagct caaaaaacta gataagcata
    15061 tcgcaagaga aatctataat tggattgtag ataacctaga cggctgcact aacccacgac
    15121 aacacggaaa aggtttagtt ggcgaccgct caggagaatg gcgttaccgt gtcggaaact
    15181 accgtattat cgcaactatc cacgatgata ttgtcaccat cgaagttttt caaatcgaac
    15241 accgtagcac cgtttataaa ctaaaacgat aaaggattga ttgcccgtga cagagaaaga
    15301 actttttgaa gagtttgggg taaaaattga aatctatgaa aatcagttat ttgaggatga
    15361 agctttctat atccccgaat tactgactat gttcttaagt gatgcaatcc ctgaaacaaa
    15421 gagagtgcaa gtcactctac acgaacttgg ccacaaagga catatgccac acatttatag
    15481 gatgttccgt gaaaaatgtg aactagaagc caacagaaac atgatacatc accttttgaa
    15541 agaagaatta gaaattgctg aggaccacac tcaattcaat tacctggtct ttatggaaaa
    15601 gtacaaatta aagaccatag ctgatgagac tatggtcaag gaagagtatt taaatttagt
    15661 tggataaaaa ataaagatga ataaaaatca aatagaaaat cttgaaaaac tgacaacttc
    15721 aaccgataag atgaaacagc taaccgagga gaatcctaat cactttaaga cttcccggct
    15781 aggtcaaagc atgacaaatt acagcactca gcttgaacgt gaaataaacg ggaaacgtcg
    15841 tagaaatagg gtcttcccct atggaacact tgtctatgtt gattttggta taaactttgg
    15901 ctctgaattt tcagcaccac attatgcgat tacactcagc aaagaagatc gcaagaacca
    15961 gaatactatc actgtgattc cacttacatc caaaccaggt tacaacaacc taccattaga
    16021 gttcaattta gctgaagctc ttggtatgct aaccgcacaa ctcattgagg cagcggaaga
    16081 caaggttgca agcgagttag tatcttattt cggagaatat gatgattttg atgagttaat
    16141 gatagagttg gaaaaagaag gccgattaga tgaaaaagaa cgagcaatga accttgttca
    16201 aaaattatcg gatgaagttg tttatgctgg caaaagactt gagaagtata tgtctgactt
    16261 agaaaaaacg acctatgcca aactcgatgc gattacaact attgacaaag ttaaaatatt
    16321 caagaaagta agcacattgg atggactggg tgtcgctcaa attttagaac cacaaatgaa
    16381 aattttaagc gatgaaataa aatcacgcta tcttatttga caatttcaca gtattttgat
    16441 aatatatagt tactaaccta ggagttttcc tagtgcaaat actctggttg gcacaagctg
    16501 ccaccgaccg agcggtaact attcatagtt gccgctttta ttttacaaca gacaaaaaag
    16561 ccctacgctc aactttggac ggtagaagcg taaggcgaat taagtatagt aaaaacctgc
    16621 tttgcagtag gtctctttac tatacccatt ttatcagaaa atgaggtaaa aaacaaatgg
    16681 cattctataa aaagctttca tctggttggc agtatcgtgt ttcctataaa gatgccaatg
    16741 gaaaataccg tgagaagtct aaaaaaggtt ttaagactaa atcacaagct caagcggctg
    16801 ccatggaatt agaactgttc ttaaagaaaa acacattcgt caacaaagac cagagtctct
    16861 tagaatacta cgaaaaatgg gctaaaatct ataaaaagcc tcacgttgct gaaagaacct
    16921 ggaagaagta ccagcagacc gaaaaacata taaagcagta ttttggaaat acacttctta
    16981 aagacatcac acctacccac taccaaagta ttgctaacaa gtttacacaa aaatattcgc
    17041 aggaaacggc tgacaatttc cactatcata tccaatcggc tgtcaaggtt gctgtccgtg
    17101 aaaaaatcat tgataccaat ttctgtgagg gggctatcgt caaatcgaat ctaaatagaa
    17161 agtccgttga ggacaagtat ctggaagagc atgagtatct acacttgatt gacatgtgta
    17221 aagacaatat ccaataccat tcctatttta caatctacct tgcagcagtg accggtttac
    17281 gctttgggga gcttcttggt ttacggctag aagatattga caaaaaagga caaatgctgc
    17341 atctcaagca agcctttgat tataccttta ctatggattt tataccccta aagtccaaaa
    17401 gttcagaacg ttctgtccct attgatcagc atactctaaa acttattcaa gcatatctaa
    17461 aaaatcaaaa agagccaaat aaggacaaca gactgattcc aaatatcagc aatgcggcag
    17521 tcaataaaac gattaagaaa attgtgggca gacccgtcac tatccactcg ctccgacaca
    17581 cttatgctag tttcctgatt gctcaaggtg tggacttgat atccgtctct caaatcctag
    17641 ggcatgaaaa tctcaatatt acacttaaaa tatatgctca ccagctggac aagctgaaag
    17701 agaagaacaa cgacaaaatt cggaacatct ttgataattt cggacgaatt tcggacgaat
    17761 agccgaaaac ccttgatac
//
LOCUS       DASFQD010000040        17745 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.040, whole genome shotgun sequence.
ACCESSION   DASFQD010000040 DASFQD010000000
VERSION     DASFQD010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 17745)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17745)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17745
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.040"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(218..1597)
                     /locus_tag="U1021_001042"
     CDS             complement(218..1597)
                     /locus_tag="U1021_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEM4711592.1"
                     /translation="MPKRIRKLVYTDKFSFFIRYFAVFTLIFGLMTAIIFQLMRSTMY
                     QNSDNTLKRIKKEPALAVGFAIARTYEPNSVFILQDSPTGEETTSSSSDSMPVPKNQK
                     NTRAGDQLRLGANTHVLLYSKSGEMINPDTFTGLADLSLDKEKLGEIKETTVESSFGM
                     SEDYRYITIGLATDELGYYSSYDIKYATILVNVSQIKSSIESYEATVAIVMVSAWLIS
                     ILASIYLSNLSMRPILISYQKQKDFVENASHELRTPLAVLQNRLESLFRHPETTILES
                     SESIGSSLEEVRNMRLLTTNLLNLARRDDGLKVDMIDVQPNYFDEIFANYLMIAEENG
                     KTLTVNNLIHQPIRTDKVLIKQLLTILFDNAMKYTDEDGTIQIAANIKDKLVCFTVID
                     NGLGISDTDKKKIFDRFYRVDKARTRQKGGFGLGLSLAQQIIKNLDGEISVRDNQPKG
                     TIFEVRLPK"
     gene            complement(1590..2261)
                     /locus_tag="U1021_001043"
     CDS             complement(1590..2261)
                     /locus_tag="U1021_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019320695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4711593.1"
                     /translation="MIKILLVEDDLSLSNSVFDFLDDFADVMQVFDGEEGVYEAETGV
                     YDLILLDLMLPEKDGFQVLKELREKGVTTPVLITTAKESLEDKGHGFELGADDYLTKP
                     FYLEELKMRIQALLKRAGKFNENTLTYGDVTVDLSTNSTTVNGEEVELLGKEFDLLVY
                     FLQNQNVILPKTQIFDRIWGFDSDTTISVVEVYVSKIRKKLKGTTFGENLQTLRSVGY
                     ILKNA"
     gene            complement(2455..2790)
                     /locus_tag="U1021_001044"
                     /pseudo
     CDS             complement(2455..2790)
                     /locus_tag="U1021_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027076.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2956..3612)
                     /gene="phoU"
                     /locus_tag="U1021_001045"
     CDS             complement(2956..3612)
                     /gene="phoU"
                     /locus_tag="U1021_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000946475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEM4711594.1"
                     /translation="MLRAQFEEELGKLNNQFYAMGNEVLAQINNAVRAFTTHDRELAK
                     EVIEADKKINAFEVKLEKKSLEIIALQQPVSTDLRRVITVLKATSDLERMGDHAVSVA
                     KAAIRMKGEVRIPVVEEEIKKMGREVRQLVEETLELYLGDADMERAYEVAARDEVVNE
                     FYSTIQELTTEEIKKNPESLVAGRDYYQVLTYLERVGDYAKNICEWVVYLRTGDITEL
                     "
     gene            complement(3641..4399)
                     /gene="pstB"
                     /locus_tag="U1021_001046"
     CDS             complement(3641..4399)
                     /gene="pstB"
                     /locus_tag="U1021_001046"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014294590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HEM4711595.1"
                     /translation="MTSPILQVKDLSVYYNKKKALNNVSIDFYPNEITALIGPSGSGK
                     STLLRSINRMGDLNPEVTLTGAIDYNGKNIYSPRTDTVDLRKEIGMVFQQPNPFPMSI
                     YENVVYGLRINGIKDKQVLDEAVERSLIGASIWNEVKDRLHDSAVGLSGGQQQRVCVA
                     RVLATSPKIILLDEPTSALDPISAGKIEDTLYGLKDKYTMVLVTRSMQQASRISDRTG
                     FFLDGDLIEYNLTKEMFLNPANKETEDYITGKFG"
     gene            complement(4411..5214)
                     /gene="pstB"
                     /locus_tag="U1021_001047"
     CDS             complement(4411..5214)
                     /gene="pstB"
                     /locus_tag="U1021_001047"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000852852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HEM4711596.1"
                     /translation="MADYNWNERHIITFPEENIALSTKDVHVYYGKNEAIKGIDMQFE
                     KNKITALIGPSGCGKSTYLRSLNRMNDTIDIAKVTGQILYEGIDINRPDMNVYEIRKH
                     IGMVFQRPNPFAKSIYRNITFAHERAGVKDKQVLDEIVETSLKQAALWDQVKDDLHKS
                     AFTLSGGQQQRLCIARAISVKPQILLMDEPASALDPIATMQLEETMFELKKDYTIIIV
                     THNMQQAARASDYTAFFYLGDLIEYDKTANVFQNAKLKSTSDYVSGHFG"
     gene            complement(5239..6126)
                     /gene="pstA"
                     /locus_tag="U1021_001048"
     CDS             complement(5239..6126)
                     /gene="pstA"
                     /locus_tag="U1021_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019316415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEM4711597.1"
                     /translation="MHAKKFDKLATGILYSIAGVIVVILTSLILYILLRGLPHVSWDF
                     LTSKSSSYKAGGGIGIQLYNSFFLLVVTLLISVPLSTGAGIYLAEYAKKGPLTNFIRT
                     CIEILSSLPSVVVGLFGYLIFVVQFEYGFSILSGALALTVFNLPQMTRNVEDSLRHVH
                     HTQREAGLSLGLSRWETVLHVVIPEALPGIVTGIVLASGRIFGEAAALIYTAGQSAPA
                     LDWSNWNPLSVTSPISIFRQSETLAVHIWKVNSEGTIPDATQVSAGSAAILLVFILIF
                     NFSARYIGKKLHAKMTSAA"
     gene            complement(6116..7033)
                     /gene="pstC"
                     /locus_tag="U1021_001049"
     CDS             complement(6116..7033)
                     /gene="pstC"
                     /locus_tag="U1021_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEM4711598.1"
                     /translation="MKNEQLAKELSSPSKNSLLEKFGKVITFLCLSLIVFIVAMILIF
                     VAQRGLSTFFVDGVSITDFLFGSKWEPSSKIFGALPMISGSFIVTILSAVVATPIAIG
                     AAVFMTEISPKRGAKILQPVIELLVGIPSVVYGFIGLQVVVPFVRSIFGGTGFGILSG
                     VFVLFVMILPTVTFMTVDSLRAVPRHYREASLAMGATRWQTIWRVILNAAKPGIFTAV
                     IFGMARAFGEALAIQMVVGNSAVIPTSLTTPAATLTSVLTMGIGNTVMGTVQNNVLWS
                     LALVLLLMSLIFNMIMKFITREGKKNYAR"
     gene            complement(7036..7905)
                     /locus_tag="U1021_001050"
     CDS             complement(7036..7905)
                     /locus_tag="U1021_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS family protein"
                     /protein_id="HEM4711599.1"
                     /translation="MKKKQKLGIAALFLLSSMALSGCSSWIDRGESITAVGSTALQPL
                     VEAAADEFGSVNIGKSINVQGGGSGTGLSQVQSGAVQIGNSDVFAEEKEGIDASKLVD
                     HQVAVAGLAVIVNEKVTVDNITTEDLRKIFTGEITNWKELGGKDLEISIINRAASSGS
                     RATFDSVIMDGQTAAQSQEQDSNGMVKSIVAQTPGAISYLSFAYLDDSVKTIKLNGFE
                     PTAENVATNDWPIWSYEHMYTMGNATDLTEEFLDYMMSDEVQDGIVESMGYISINDMK
                     VVKSADGTVSEKE"
     gene            complement(8043..9344)
                     /locus_tag="U1021_001051"
     CDS             complement(8043..9344)
                     /locus_tag="U1021_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmF rRNA methyltransferase first C-terminal
                     domain-containing protein"
                     /protein_id="HEM4711600.1"
                     /translation="MQLPQDFIDKYNHLLGSEAQAFFESFDEPAISGFRVNPLKENQL
                     DFEQLIPDMPWSYYGKVSGKSPEHVTGLVYSQEPAAQVVGQIAAPEKGMKVLDLAAAP
                     GGKSTHLLSYLENTGLLVSNEISNKRAKILAENIERFGARNVVVTNESADRLAKVFPG
                     YFDMIVLDAPCSGEGMFRKDPDAIQYWSKHYPAQCASLQREILESALNMLAPGGQLIY
                     STCTWSPEENEEVVTWLLEQYDLELIDIPKINGMAEGIGYPQTARMYPHHFAGEGQFV
                     AKFRFLGEASQKKLKPGKSNLNREQQSLWKEFEQKHLRVQLDGLLQVFGDNLYLLPHG
                     LPDLSKVKIARNGLHLGTFKKKRFEPSFALGLALHSSEVKNRVEISSEEFSSYTAGHT
                     IAVSKDLANGWYQVAVQGNGLGFAKIVSGTLKNGFPKGLRF"
     gene            complement(9344..10102)
                     /locus_tag="U1021_001052"
     CDS             complement(9344..10102)
                     /locus_tag="U1021_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEM4711601.1"
                     /translation="METKYHFAQTIVLEAGNFLRQHLHDDLQIEEKGDFTDLVTHLDK
                     QVQEMLTQQIQSRYQGDGILGEEGGDVSSIHEGNVWVIDPIDGTTNFIAQKTDFAIMI
                     AYFENGVGKFGIIYDVMRDKLFHGGDSFPVYCNQERLKKPELCPLRQSLIGINAKLYA
                     GNAHGVAELANQSLGTRSVGSAGIGFTHVLEGRLFAYASYLCPWDYAAASIIGSSLGL
                     VMLSFDGPSLAYDKREFVMLVSESHLEEVKGYIF"
     gene            complement(10092..10370)
                     /locus_tag="U1021_001053"
     CDS             complement(10092..10370)
                     /locus_tag="U1021_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002286915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0223 family protein"
                     /protein_id="HEM4711602.1"
                     /translation="MNKNYSYPLDFSWSTEEISSVLSFLNQVEAAYEKGADAVAILAS
                     YKSFKDVVKSKGQERQIDRDFEAVSGYSTYRVVKAARDKGKGVIRFGN"
     gene            complement(10385..10786)
                     /locus_tag="U1021_001054"
     CDS             complement(10385..10786)
                     /locus_tag="U1021_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spx/MgsR family RNA polymerase-binding
                     regulatory protein"
                     /protein_id="HEM4711603.1"
                     /translation="MITLFLSPSCTSCRKARAWLTSHEVPFIEHNIMTRPLTAEELKN
                     ILALTENGTDDLISTRSKVFQKLDIDVDELSVKQLIGLIETYPSLLRRPIILDEKRMQ
                     IGFNEDEIRAFLPRKYRKQELKNATLRAEIR"
     gene            complement(10860..11597)
                     /locus_tag="U1021_001055"
     CDS             complement(10860..11597)
                     /locus_tag="U1021_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HEM4711604.1"
                     /translation="MLKRLIRHPFYEKAMTYIALVYVFLIVLALMDANIANSSGYRVL
                     DLLLWFVFVCDYFAQLYYADDILEYVQGHILELIAIIPFDLFFSFLRLGRLARLFRLV
                     KVTRMFALSNRFWDTINKLLHTNSLSKVLMLNISAVLVASVLLSVIEGKSFFDALWWS
                     IVTMTTVGYGDIVPQDTISKIIAILLMLVGICTFGMVTSTITRFFSETERETKLDTLM
                     AKIDEQNEILLGLEKKIESLEKLQGRD"
     gene            complement(11590..12513)
                     /locus_tag="U1021_001056"
     CDS             complement(11590..12513)
                     /locus_tag="U1021_001056"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEM4711605.1"
                     /translation="MKIRTIKNYQELHQEKPTVLVLGYFDGIHLGHKALLDRARQVAD
                     EKGLTVTVLTFPETPRLAFARFTPELLLRLTSQDQRYHLLEQYGVDQLVLTDFTSEFA
                     SNTPQQFLERYIKGLNAQVLVAGFDYHFGNCRADVKDLTESFDGQVEIVSEVSMDGEK
                     VSSTRIRQAIQSGDVSLANQLLGYPFMTEGIVVHGDARGRTIGYPTANLAPFDRVHLP
                     SEGVYVADVEVDGKRYRAMTSVGKNVTFDGTEMRIEAHIFGFDRFIYGEKITIFWLEK
                     IRDMVKFDGIEGLMEQMKSDEEFALQWEKYA"
     gene            complement(12533..13423)
                     /gene="truB"
                     /locus_tag="U1021_001057"
     CDS             complement(12533..13423)
                     /gene="truB"
                     /locus_tag="U1021_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005590179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEM4711606.1"
                     /translation="MSGIINVKKEAGMTSHDVVFKLRKILQEKKIGHGGTLDPDVTGV
                     LPIAVGKATRMIEYMQEEGKIYEGEITLGYSTTTEDASGDLVERTPVLDIAEQAVDEA
                     MASFVGTITQIPPMYSAVKVNGRKLYEYARAGEEVERPQRQIEIYSFERTSPIELADD
                     CARFTFRVRCGKGTYVRTLSVDLGAKLGYASHMSKLERTGSAGMDLADALTLEEISSL
                     VAENDFSFLRPIEQGIGDLPIVDLTIEQVIEARYGRFIALDSQAELLAGFHREKLVAI
                     LEKRDQVYKPRKVFLEEVLA"
     gene            complement(13476..13685)
                     /locus_tag="U1021_001058"
     CDS             complement(13476..13685)
                     /locus_tag="U1021_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711607.1"
                     /translation="MEWSTIKFGDKGYYDAPLIFSWGYDEEEEVGIEEAVTYEVAPSG
                     TMRRIHKELENLIGTTFGSYRFYDD"
     gene            complement(13715..15040)
                     /locus_tag="U1021_001059"
                     /pseudo
     CDS             complement(13715..15040)
                     /locus_tag="U1021_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002312832.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF438 domain-containing protein"
     gene            complement(15040..15270)
                     /locus_tag="U1021_001060"
     CDS             complement(15040..15270)
                     /locus_tag="U1021_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1858 domain-containing protein"
                     /protein_id="HEM4711608.1"
                     /translation="MNTIDLNLPVAEIINQHPEVKDILVELGFKPLANPAMLNTVGKV
                     TNLKTGSKMTKIPLDRIQQVLECNGYEVIGGE"
     gene            complement(15283..15777)
                     /locus_tag="U1021_001061"
     CDS             complement(15283..15777)
                     /locus_tag="U1021_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4711609.1"
                     /translation="MIVPLQFEHLLQLDEAFQKQGWPSRKEILTNYLREQEKGERIVL
                     VAEETGVCKGYITLIKQVKEGPFYQSGIPEIADFNVFEDFQNQGIGWQLLDAICQLAS
                     EFTDIVGIGVGLNANYGKAQRLYVKHGFIPDGSGVWYRGRSLPVGAKAYNDDELALYF
                     TKKL"
     gene            complement(15779..17032)
                     /locus_tag="U1021_001062"
     CDS             complement(15779..17032)
                     /locus_tag="U1021_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HEM4711610.1"
                     /translation="MHQITCPHCGTAFQVNETEYSQLLAQVRGAEFDKEIHDRLERER
                     ELLSQKAENDLQARLSDKDKEILELTAKLDKFASQTELEISSAISQKDQEIQELKAQL
                     GQIGLAKDLELQQAVAQVEKERDAAQNALVLQEQKQELALATTRQEYEVRLKAADEQV
                     EFYKNFKAQQSTKAIGESLEQFAEAEFNKVRSYAFPHAKFAKDNEVSASGSKGDFIFR
                     DFDESGLEFISIMFEMKNEADTTKTKHKNADFFKELDKDRREKKCEYAVLVSMLEADN
                     DYYNTGIVDVSHEYEKMYVIRPQFFIQLIGILRNAALNSLQYQQELALVKEQNIDITH
                     FEEDLEIFKNAFAKNYQSASNNFQKAIDEIDKAIKRMEAVKAALTTSENQLRLANNKL
                     DDVSVKKLTRNNPTMKAKFEALRED"
     gene            complement(17039..17287)
                     /locus_tag="U1021_001063"
     CDS             complement(17039..17287)
                     /locus_tag="U1021_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711611.1"
                     /translation="MKKWWEQLKEEYYETRFDSNEDWMEWFIKRKMTWGWRWPTAITI
                     FVLWALSLPDARNVVRFFYFLLTLAVLHKLISYLKRRK"
     gene            complement(17305..>17745)
                     /locus_tag="U1021_001064"
     CDS             complement(17305..>17745)
                     /locus_tag="U1021_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEM4711612.1"
                     /translation="HYLLSICYSVSASLTEAWDLLATDSGFAHWFPQLNIVGNTLVFE
                     MEGFREVMDLLEYRKNEKIAYRWDSATVSFTLSQLENQTLITFEERIPEDFGNEFANA
                     QKDMTGWLVPNECIKKFLEGQEPPVCQPLQEKWRTFLELELEGL"
BASE COUNT         5188 a         4079 c         3191 g         5287 t
ORIGIN      
        1 cctcacttcc aaacatttag gttcgatttt ctatggtcac tttcttattt ttaggtgacc
       61 agctgaaaca gttccccaaa cctttggagg ctggagatag agcgaacaga gttcgctaca
      121 aaactatctg ggagacagtt ggaagttgga aatagagcga actttgagaa gaaaggctgg
      181 attttttacc cagcctctaa tcttgatgaa tggttagtta tttgggtaaa cgtacctcaa
      241 aaatagttcc tttcggttgg ttatctctca cagaaatctc accatctaaa ttcttaataa
      301 tttgttgagc taaagataaa cctaaaccaa atccaccttt ttgacgtgtt ctagccttgt
      361 caactcggta aaagcgatca aagattttct ttttatcggt atcgctgatt cccaaaccat
      421 tgtcaataac tgtaaaacaa actagtttgt ccttgatatt agctgctatt tgaattgtcc
      481 catcttcatc ggtatacttc atagcgttgt caaacaaaat ggtgagcaac tgtttaatca
      541 aaaccttgtc tgttcgaatt ggctgatgaa tcaaattatt aactgttaga gtttttccat
      601 tttcttcggc aatcataagg taattagcaa agatttcatc aaaatagttg ggttggacat
      661 cgatcatatc gacttttaag ccatcatcac gacgagccaa attaagtaaa tttgttgtca
      721 atagtcgcat atttcgaact tcttctaaac tagatccgat gctttcacta ctttccaaaa
      781 tagttgtctc gggatgacga aatagacttt ccaggcgatt ttgaagaact gccaacggtg
      841 tgcgtaactc atgactagca ttttcaacga agtctttttg tttttgataa ctaattagga
      901 ttggacgcat gctaagattc gataggtaaa tacttgctag tatagaaatc aaccaagctg
      961 ataccataac aatagcaact gtcgcttcat agctctcaat ggaagattta atttggctga
     1021 cattcaccaa aattgtcgca tattttatat cataggacga ataataacct agttcatctg
     1081 tagccagccc aatcgttata tagcgataat cttcagacat accaaaactt gattcaaccg
     1141 tagtttcctt aatttcaccc aatttttcct tgtctaatga taggtcggcc aaaccagtaa
     1201 aagtatctgg attaatcatc tctccacttt tactatagag taaaacatga gtattggcac
     1261 ctaatctcag ctgatctcca gctctagtat ttttttgatt tttaggaaca ggcatgctat
     1321 ctgaactaga gctcgtagtt tcttcaccag ttggactatc ttgaaggata aatacagaat
     1381 tgggctcata ggttcttgcg attgcaaaac caacagccag cgctggttct ttcttaatgc
     1441 gtttcaaggt gttatctgaa ttttggtaca tagttgaacg cattaattga aaaatgatag
     1501 ctgtcatcaa gccaaaaatc agggtaaata ctgcaaaata acggataaag aaggaaaatt
     1561 tatccgtata cactaatttt ctgattcgct taggcatttt ttagaatgta cccgacacta
     1621 cgcagggttt gaagattttc cccgaaggtc gttcctttca actttttcct aattttagaa
     1681 acatatactt ctactactga aatagtagtg tcactgtcaa atccccaaat acggtcaaaa
     1741 atttgagttt ttggtaagat aacattttga ttttgcaaga agtagactag tagatcgaat
     1801 tcttttccta gcaattcaac ttcttcgcca tttacagttg tagagtttgt cgataagtca
     1861 acggtcacgt ccccataagt tagtgtgttt tcattaaact tacccgctcg ttttaataga
     1921 gcttgaattc gcatcttcaa ttcttctaaa taaaacggtt tcgtcaaata gtcatcagcc
     1981 cccaattcaa aaccatggcc tttatcctct agactttcct tggctgttgt aatcagaaca
     2041 ggtgtcgtaa cacctttttc acgtaattct ttcaaaactt ggaagccatc tttttcaggc
     2101 aacattaaat ccaaaagaat caaatcataa acgcctgttt ccgcctcata aacgccctct
     2161 tcaccatcaa aaacctgcat aacatccgca aaatcatcta agaaatcgaa aacagaattt
     2221 gatagactta aatcatcttc cactaacaat attttaatca tcatacactt ccttacattt
     2281 cggtttaata aacaaaccaa agacctggga caggtcacgg tctttaagag aaatggttaa
     2341 ataaagtact actatgacca gctgaaaaat gaatgataag gtagtcttta tctaactatt
     2401 tattgatacg agttcattat atcatggaat aagtaaaaat cgaaatctca atatttattg
     2461 attagaagaa ctactatctc ctgaaatttg agctttattt tcttgattcc tcttttttaa
     2521 agcattcact tcatcagaag aagtactcga gtttgactgg gttgctccac ttgtcgcatc
     2581 aggaggagtt gtaccttgtc cagatggcat gccttgggta gctacttgtc cactcttagc
     2641 cacgcgccaa agttgcctga ctttgtgttg aaactcctgc tgagctttta gaaatactca
     2701 ttcccctgca aagcccaaga tagcagctga aatagcaaca gcagctagta ctgtttttga
     2761 ctgtgactta aattgattaa taaatgacat gaaattcccc ttttcaatag aatattatca
     2821 gaatgagacc tgttaaataa ctcctcttca cctgatgata atagtatagt attgaaaact
     2881 taaaacaagc taaagaaatt cagcattttt tataaaagtc cattacacaa aaagaagccc
     2941 tctcggactt ctgaattaca actctgtaat atcacctgtg cgtagataaa caacccactc
     3001 acaaatattt ttagcataat caccgacacg ttccaagtag gttaaaactt ggtaatagtc
     3061 gcgaccagca accaaggatt ctggattctt cttgatttct tccgttgtca attcttgaat
     3121 agttgaatag aattcattga caacctcatc acgtgctgct acttcataag cgcgctccat
     3181 atcagcatca cctaagtaga gttccaaagt ttcttctact aattgacgaa cttcacgtcc
     3241 cattttcttg atttcttctt caacaactgg gatgcgaact tctcccttca tacggatagc
     3301 tgctttagca actgagactg catggtctcc catacgctcc aaatcactag ttgcttttaa
     3361 gactgtgata acgcgacgaa gatctgttga gacaggttgt tggagagcaa tgatttcaag
     3421 tgattttttc tctaatttca cttcgaaagc attaattttc ttatctgctt caataacttc
     3481 ttttgctaat tcacgatcat gagttgtaaa ggcacgaaca gcattattaa tctgagccaa
     3541 tacttcattt cccatggcgt aaaattggtt attaagtttt cctaattcct cttcaaattg
     3601 agctcttaac atgtgaacct ctttcttttt cttataggcc ttagccgaac ttacctgtaa
     3661 tatagtcttc tgtttcttta ttggcaggat tcaagaacat ttcttttgtc aaattgtatt
     3721 ctatcaaatc gccatcaagg aagaaacctg ttcgatctga aatacgtgat gcctgttgca
     3781 tagaacgtgt tactagcacc attgtatact tatctttcag accataaagt gtgtcctcaa
     3841 ttttaccagc tgagattggg tcgagagctg aagttggctc atccaacaaa ataatttttg
     3901 ggcttgttgc caatacgcgg gccacacata cacgttgctg ctgtccacct gaaagtccaa
     3961 ctgctgagtc atgcaagcga tctttcactt cattccaaat agaagcacca atcaaggaac
     4021 gctcaactgc ttcgtccaag acctgcttgt ccttgatacc gttaatacgc aaaccataaa
     4081 cgacattctc gtagatagac atcgggaatg ggtttggttg ttggaatacc ataccgattt
     4141 ccttacgaag atcaacagta tccgtacgag gactgtatat gttctttccg ttgtaatcaa
     4201 tcgcacctgt caatgttacc tctgggttta aatctcccat acggttaata gaacgcaaga
     4261 gggttgactt cccagaacca gatggtccaa tcaaagcagt aatttcattt ggatagaaat
     4321 cgattgacac attattcaag gctttcttct tattatagta aacagacaaa tcttttactt
     4381 gtaaaatagg tgatgtcatt tgttcccttt ctatccaaaa tgtcctgaaa cgtagtcact
     4441 agttgacttg agttttgcat tctggaagac gtttgctgtc ttatcatatt caatcaagtc
     4501 acccagatag aagaaagctg tgtaatcact tgcacgagct gcttgttgca tattgtgcgt
     4561 aacaatgata atggtgtagt ccttcttcaa ttcaaacata gtttcttcta actgcatagt
     4621 cgcaattgga tccaaggctg atgcaggctc atccataagc aagatttgtg gttttacaga
     4681 gatagctcgt gcaatacaca aacgctgttg ctgtccacct gataaagtaa aggctgactt
     4741 gtgcaagtca tcttttacct gatcccaaag ggctgcttgt ttcagagaag tttcaacaat
     4801 ctcatccaaa acctgcttat ctttcacacc tgcacgttca tgtgcgaatg tgatgttgcg
     4861 gtaaatagat tttgcaaatg ggttgggacg ttggaatacc attccgatat gcttacgaat
     4921 ttcgtaaacg ttcatatctg gtctattgat gtcgattcct tcataaagaa tttgaccggt
     4981 taccttagca atatcaatag tatcattcat acgattaaga ctgcgaagat aggttgattt
     5041 cccacaccct gatggtccaa tcaaggctgt aattttattt ttttcgaact gcatatcaat
     5101 gcccttgatt gcttcatttt taccatagta aacatgaaca tcttttgtcg aaagggcgat
     5161 attctcctct ggaaaagtaa tgatatggcg ttcattccag ttgtaatctg ccattttttc
     5221 tccttataag tcagacttct aggctgctga agtcattttc gcatgaagtt tcttaccgat
     5281 atatcgtgca gaaaagttga aaatcaagat gaataccaag aggatggctg ctgaaccagc
     5341 tgacacttga gttgcatctg ggattgtccc ttcgctgttg accttccaaa tatgaaccgc
     5401 aagggtttct gattgacgga agatagaaat cggactcgta acactcaatg gattccagtt
     5461 tgaccagtca agagctggtg ctgactgacc agccgtgtag ataagagctg ctgcctcacc
     5521 gaagatacga ccagatgcca agacgatgcc tgttacaatc cctggaagtg cttctggaat
     5581 aacaacatgg agaacagttt cccaacgtga tagaccaaga gacaatcctg cttcacgttg
     5641 tgtatggtga acgtgacgaa ggctgtcctc tacgttacgc gtcatctgtg gtaaattaaa
     5701 gactgtaaga gccaaggcac ctgataagat agaaaaaccg tactcaaact gaacaacgaa
     5761 aatcaagtaa ccaaacaaac caacgacaac ggacggtagg gatgacaaaa tctcaataca
     5821 ggtacggata aagttagtca atggaccttt tttagcatat tcagccaaat aaatacctgc
     5881 accggttgac aagggaacag aaattaagag cgttacaacc aataggaaga atgagttgta
     5941 gagctgaatt ccaataccac caccagcttt gtaagatgaa gatttacttg tcaaaaaatc
     6001 ccagcttaca tgtggcagac cacgtagcaa gatgtaaaga atcagtgacg tcaggataac
     6061 gacaatcaca ccagcgattg agtaaagaat accagtcgcc aatttatcaa attttttagc
     6121 gtgcatagtt tttcttaccc tctcttgtaa taaatttcat aatcatgtta aagataaggc
     6181 tcatcaagag caagactagg gccaaggacc ataggacgtt gttctggaca gttcccataa
     6241 ccgtattacc gatacccatt gtcaaaacag aagttaaagt cgctgctggc gttgtcaagg
     6301 aagtcgggat aaccgcagag ttccccacta ccatctgaat agccaaggct tcaccaaagg
     6361 cacgcgccat accaaagata acggccgtaa aaatacctgg cttagctgcg ttcaaaataa
     6421 cacgccaaat cgtctgccag cgagtggctc ccatagccaa acttgcttca cggtagtgac
     6481 ggggtactgc acgcaaactg tcaaccgtca taaaggttac tgttggcaaa atcataacga
     6541 aaagtacaaa tacacccgac aagataccga aacctgttcc accgaagatt gaacgtacaa
     6601 atggcacaac tacttgcaaa ccaataaaac catatacaac cgatggaata ccgaccaaaa
     6661 gttcgataac aggttgtaag atttttgcac cacgttttgg tgatatttct gtcatgaaga
     6721 ctgctgcacc gattgcgata ggggtcgcaa caacagctga cagaatcgta acaatgaaag
     6781 aacctgaaat cattggcagg gcaccaaata ttttcgagct tggttcccac ttgcttccaa
     6841 ataagaaatc agtgatgctc acaccgtcaa caaagaaagt cgataatcca cgctgtgcaa
     6901 cgaaaatcaa aatcattgca acaataaaga caatcaatga cagacaaagg aatgtaatta
     6961 ccttaccaaa cttctctaat agagagtttt tagatggaga cgataactct tttgctagtt
     7021 gttcgttttt catgcttact ccttctcaga caccgtgcca tcagcacttt tcacaacttt
     7081 catatcgttg atagaaatgt atcccatact ttcaacgata ccatcttgaa cctcatctga
     7141 catcatgtaa tctaaaaatt cttctgtcaa atcagtcgca tttcccatcg tatacatatg
     7201 ctcataggac caaattggcc aatcatttgt tgctacattt tcagcagttg gttcaaaacc
     7261 gtttaactta attgttttaa cggaatcatc tagataagca aatgataggt aggaaattgc
     7321 acctggtgtc tgagcaacaa tagattttac cataccgtta gaatcttgtt cttgactctg
     7381 agctgcggtt tgtccatcca tgataacact atcaaaggtc gcacgtgaac ctgaactagc
     7441 tgcacggtta atgattgaaa tttccaaatc cttaccaccc agttctttcc agttggtaat
     7501 ctcaccagtg aaaatcttac gaagatcttc tgtggtaata ttatcaactg tgactttttc
     7561 attgacaatc acagcaagac ctgcaacggc aacttgatgg tctaccaatt tgctggcatc
     7621 aatcccttct ttttcctcag caaatacgtc agagttacca atctgaacag ctccagactg
     7681 aacttgtgac aagccagtac ctgatcctcc accctgaacg ttgatggatt taccgatatt
     7741 gacactacca aattcatctg ctgctgcctc aacaagtggt tgaagcgctg tcgaacctac
     7801 ggctgtaata gactctcctc tatcgatcca agaagaacaa cctgaaagag ccatactact
     7861 caaaagaaac aaagctgcaa ttccaagctt ctgctttttt ttcatttcgt tttttccttt
     7921 acatttttca gtggaatctc ctaaaattaa ctctgtattt tacatagaat ttacaagata
     7981 tttccactca tccactatat catataaaaa gacaagttgc aaaaaaaatc tgcttaattc
     8041 aactaaaatc tcaagccctt aggaaagccg tttttaagcg ttccagatac aatttttgcg
     8101 aaaccaagac cgttcccctg aactgctacc tgataccagc cattagctaa atccttggaa
     8161 acagctattg tatgtccagc agtataggac gagaattctt ctgagctgat ttccactcga
     8221 tttttaacct ccgaactatg gagtgctaga cctaaagcaa aacttggttc aaatcttttt
     8281 ttcttaaacg tccccaagtg aagaccattt cgagcaatct ttacttttga caaatcagga
     8341 aggccgtgtg gcagtaggta gagattgtcg ccaaaaacct gcagtaaacc atccaattga
     8401 acccttaaat gcttctgttc aaattctttc cagagagatt gctgttctct attcaaattg
     8461 gattttcctg gttttaattt tttctgactg gcttccccta gaaatctaaa tttggcaacg
     8521 aactgacctt ctcctgcaaa atggtgggga tacatacgag ccgtttgagg atagccaatc
     8581 ccttctgcca tgccattgat tttaggaatg tctattagtt ccaaatcata ctgttccaag
     8641 agccacgtca ctacttcttc attttcctct ggtgaccaag tgcaagtaga ataaatcaat
     8701 tgaccacctg gagccaacat gttcaaggcc gattctaaaa tttcacgctg taagctggca
     8761 cattgtgctg gataatgttt ggaccaatat tgaatcgcat cggggtcttt tcgaaacatc
     8821 ccttcaccag aacagggagc gtctaggaca atcatatcga aatatcctgg aaagaccttg
     8881 gccaaacgat cggcagattc attggtcacg actacatttc tcgccccgaa acgctcaata
     8941 ttttcagcca atatttttgc tcgtttgtta gaaatttcat tactaaccaa gagccccgta
     9001 ttttctaagt atgaaagcaa gtgagtagac tttcctcctg gcgctgctgc caagtccaat
     9061 actttcatcc ctttttccgg ggctgcaatc tgaccgacaa cctgtgcagc tggctcttgt
     9121 gaataaacca aaccagtcac gtgttcaggc gatttacctg aaactttacc atagtaagac
     9181 caaggcatat ctggaattag ttgctcaaag tccaactgat tttcctttag tggattgacc
     9241 cgaaaacctg aaatagctgg ctcatcaaag ctctcaaaaa atgcttgggc ttcactacca
     9301 agcaaatgat tatatttatc tataaaatcc tgtggtaatt gcattagaat atatacccct
     9361 tcacttcctc aagatgggat tctgagacta gcataacaaa ctctcgctta tcataggcca
     9421 gactcggacc atcaaaactt aacatgacta agcctaaaga ggaaccaata atactggctg
     9481 ccgcgtagtc ccagggacac agataagaag cataggcaaa taatcttcct tccagaacat
     9541 gggtgaaacc aatcccagcg cttcctacag atcttgtacc taaactttga tttgctaatt
     9601 ctgccactcc atgtgcattg cctgcgtaca actttgcatt tattcctatc aaactctggc
     9661 gaagagggca caactctggt ttctttaagc gttcttgatt gcaataaaca gggaatgaat
     9721 ctcctccatg gaaaagtttg tctcgcatga catcataaat gataccgaac tttcctactc
     9781 cattttcaaa ataggcaatc ataatggcaa aatcagtttt ctgagcaata aaatttgtgg
     9841 tgccatcaat tggatcaata acccaaacat ttccttcatg aatagaagaa acgtctccac
     9901 cttcctcacc taaaatccca tcaccttgat agcgagattg aatctgttga gtcagcattt
     9961 cttgcacttg tttatcaagg tgtgttacca agtctgtaaa gtcacctttt tcttcaatct
    10021 gaagatcatc atgtaaatgc tgtcggagaa aatttccagc ttccaggaca atcgtttggg
    10081 caaagtgata cttagtttcc aaaacgaata actcctttcc ccttatctcg agcagcctta
    10141 acaactcgat aggttgaata tccagaaact gcttcaaagt cacgatcaat ttgacgttcc
    10201 tgtcccttac ttttaacaac atctttgaag cttttataac tagctaatat agctaccgca
    10261 tctgctcctt tttcataagc tgcctccacc tgattcaaaa aagaaagcac ggaggaaatc
    10321 tcctctgtgc tccacgaaaa atcaagtgga tatgaataat ttttgttcat atcttttatc
    10381 tttcttatct tatttctgct ctcaatgtag cattttttag ttcttgtttg cgatacttcc
    10441 gcggaagaaa tgcacgaatt tcatcttcat taaaccctat ctgcatccgc ttctcatcca
    10501 aaataatcgg acgccgtaag agactcggat aggtttcgat taacccaata agctgcttca
    10561 cagaaagctc atcaacatca atatctagtt tctgaaaaac ttttgaacgg gtagaaatca
    10621 agtcatctgt cccattttct gtcaatgcta aaatgttctt caattcctca gcagttagag
    10681 gtctagtcat aatattgtgc tcaataaaag ggacttcgtg acttgtcagc caagcacgag
    10741 ctttacgaca actggtacaa ctcggtgaca aaaataaagt aatcatgtct tccatcccct
    10801 ctaaaaacat ttttcttctt atagtatact ctaacttaaa agagttttca atagtaaatc
    10861 taatctcttc cctgtaattt ttccaaagat tctatttttt tctctaagcc tagcaatatt
    10921 tcgttttgtt catcaatttt tgccatcaag gtatccaact tcgtttcacg ctctgtttca
    10981 gagaaaaaac gagttattgt agaggtaacc ataccaaaag tacaaatacc aaccaacatc
    11041 aagaggatgg ctataatttt agaaatcgta tcttggggga caatatctcc gtaccctaca
    11101 gttgtcatcg ttacaatgga ccaccaaagt gcatcgaaga atgatttccc ttcaatcact
    11161 gataataaga cacttgcaac tagcaccgct gagatattta acatcaacac tttggataaa
    11221 ctgttggtat gcaaaagctt gttgattgta tcccagaatc gattagacag ggcaaacatt
    11281 ctcgttactt tgactaatct gaagagtcgt gcaagtcttc ccaagcgaag aaaactgaag
    11341 aataaatcga atggaataat ggcaattaat tccaagatat ggccctgtac atattcaagt
    11401 atgtcatccg cataataaag ctgagcaaaa taatcgcaga caaaaacaaa ccataagagc
    11461 aagtctagta cccgataccc actagaatta gcaatattag catccatcaa tgcaagtacg
    11521 ataagaaata catagactag agctatgtag gtcatagcct tctcataaaa aggatgacga
    11581 atcaatcgtt taagcatatt tctcccattg caaggcaaat tcctcatcag acttcatctg
    11641 ctccatcaaa ccttcaatcc cgtcaaattt aaccatatct cgaatttttt caagccaaaa
    11701 aatagttatt ttttctccgt agataaagcg atcaaatcca aaaatatggg cttctatccg
    11761 catctccgtt ccatcaaagg tcacattttt cccaacgctt gtcatagctc gatagcgttt
    11821 tccatctact tcgacatcag cgacatagac tccctcagat ggtaaatgga cacggtcaaa
    11881 aggagccaga tttgcagttg gatagccaat agtgcgccct ctggcatctc catgcacaac
    11941 aattccctcc gtcataaatg gataacctaa aagttgatta gctagagaga catcccctga
    12001 ctggatagct tggcgaatgc gagttgaaga aactttctct ccatccatgc tcacttcact
    12061 tacaatttct acctgaccat caaatgactc tgtcaaatct ttgacatctg ctctgcaatt
    12121 tccgaaatga tagtcgaaac ctgccactaa gacttgtgcg ttcaacccct tgatgtagcg
    12181 ttctaaaaac tgctgaggag tattgcttgc aaactcactg gtaaaatctg tcaaaaccag
    12241 ctggtctaca ccgtattgct ccaacaagtg gtaacgctga tcttgactgg tcaaacgcag
    12301 taaaagttct ggtgtaaaac gcgcaaaagc cagacgaggt gtttctggaa aggtcagaac
    12361 agttactgtc aatccttttt catctgcaac ttgtctagca cggtctaaga gggccttatg
    12421 ccccaaatga atcccatcaa aatagcctaa taccaaaaca gttggttttt cctgatggag
    12481 ttcttgataa ttttttatcg ttctaatctt catattgttt attttatcac aactaggcta
    12541 aaacttcttc tagaaaaacc ttacgaggct tgtaaacttg gtcacgtttt tccaggatag
    12601 ccaccagttt ctccctatga aaacctgcca acaattccgc ctgactatct aaggctataa
    12661 aacgaccata tctagcttca atcacttgct caatcgtcaa atctacaatc ggcaagtcac
    12721 caattccctg ctcaataggg cggaggaatg aaaaatcatt ttcagctacc agcgaagaaa
    12781 tttcttctaa agtcaaggca tccgctaggt ccattccagc tgaacctgta cgctccagct
    12841 tagacatgtg actggcgtag cctaacttag cccctaagtc aacagaaaga gtacggacat
    12901 aggtgccctt accacagcga actcggaagg taaaacgtgc acagtcatct gctagttcaa
    12961 tcgggctagt ccgttcaaaa ctgtaaatct caatttggcg ttgaggacgc tcaacttctt
    13021 cacccgcccg tgcgtactca tagagcttgc ggccatttac tttgacggcg gaatacatag
    13081 gtggaatctg ggtaatagtg ccgacaaaac tagccatagc ctcatcaact gcctgctctg
    13141 ctatatccaa aaccggtgtc cgctcgacga ggtcgcccga cgcatcttcg gtagtggtcg
    13201 aatagccgag ggtaatctct ccctcgtaaa tcttgccctc ttcctgcatg tactcaatca
    13261 tgcgcgtggc cttgccgact gcgatgggca gaacgcctgt cacatctggg tccaaggtcc
    13321 caccatgccc aatcttcttc tcctgcaaaa tcttgcggag cttaaaaaca acatcgtgcg
    13381 aggtcatgcc cgcctctttt tttacgttaa taattcctga aatcattctt ccattataac
    13441 acaaaggacc gctcttgtga gcggtccggt atcaatcagt catcatagaa acgatagcta
    13501 ccgaatgttg tacctatcaa attctcaagt tccttgtgaa tacgtcgcat ggttccagaa
    13561 ggtgccactt catatgtaac agcctcttca atcccgacct cttcctcctc atcatagccc
    13621 caagaaaata tcaatggagc atcataatag cctttgtcac caaatttgat tgtcgaccac
    13681 tccaatagct tgatttcttt caaaaatgac taaactagag ttcccgatga aaatcgctat
    13741 ctatctcaaa aaatggttga atatcctgga catactccaa aacgccttga aactctcctt
    13801 ggtcatcacg caccgcctta tagaccacat agacaaactt gcccatgctc tcggacttga
    13861 accacatggt gacctggtct ttttgccctg tgcggagcaa gtcaaaaatc ttcttgacct
    13921 tgtccactat tttgggagga tggcagagct ccacatgacg tccaatctgg cttggcgtcc
    13981 gtttgaaaat catgtcttcg acagggtcgc tgtcattgta atattggaaa atgtcatcct
    14041 tgttgacaaa ggtgagttcc agcggtaaat ggttgagtat gagattggcc tgctcgacag
    14101 acaagtaacc attgccaaag gtttgcgggc tggtcctatc ctgaacagtt tccgactgtt
    14161 tcttgggtgt gaaggtaatg gtaaactggc cttctggcgt gtcgataatt tgctgatttg
    14221 gtcctgctgg ctgcggaaaa atgctatctg ctgcctgctc tgctatttcc ccaaaaacct
    14281 cccgatgagg cacccacttg gctgtcggct tgacaatggc gtagccgtag gcatcgctgt
    14341 ctgctgccac ttggagccag tcgtcctggg tgaaaatctc cagcaaaatc atgagaagga
    14401 tggtctcttc cttaaaaatc atctcctcga attccttggc aaaggtttca aactactctt
    14461 ttgttgccac taggtcgccg ctttcaagag ttttacgagc cgttttgaag aggtcgcgaa
    14521 tctcatcatc cacaccccac atgaccttgg gcggtgcatc atgaccgtac cgctccataa
    14581 tcggaaagaa gactttttcc ttgcgagtgt agtggttttc aaactgcccc aagaggtcaa
    14641 actggcgtgt caaaccttgc aggagctggt cttgcagttc cgtatcttct gtcagctcat
    14701 actggtcaat gatacggcgg atgcgtaaga gagctgcccg cagggccagg ttttcctgct
    14761 tgaagacata gactggatgt ccttcctggt ccatatccgc cacttccaca tccgcaatgg
    14821 ctcctttgaa gaggttagcg tggatattgc aaaggctcat gacatcttca aaagtgatac
    14881 ccgtgtcgct ggacataagc tcatgctcca tcatggagat ttccagagca gaaactcccg
    14941 tgaaatgctg attaaactgg tcctgaacag actctgggat agcaccattg tgcaggtcca
    15001 agagaatatt cttcaaaatg tcaatccgtt gttccgtcat tattctcctc ctattacctc
    15061 atagccgttg cattccaaga cctgttgaat acggtctaac ggaatcttgg tcatcttgga
    15121 gcctgtcttc agattggtca ccttaccaac tgtgttgagc atagctggat ttgccaaagg
    15181 cttgaaacca agctccacca gaatatcctt gacttctggg tgctggttga taatctctgc
    15241 aacaggcaga tttaggtcga tggtgttcat tttacttttc ctctataatt tttttgtaaa
    15301 atacaaggcc aattcatcat cgttataggc tttggcacct actggcaaag agcgccctcg
    15361 gtaccagaca ccgcttccgt ctggtatgaa accatgtttt acatagagcc gttgagcctt
    15421 tccataattt gcattcaaac caactccaat acctactata tccgtgaatt ctgaggcaag
    15481 ctgacagata gcatctaata attgccaacc tatcccctga ttttgaaagt cttcaaaaac
    15541 attgaaatca gcaatttcag gtattccaga ttggtaaaac ggcccctcct tcacttgctt
    15601 aatcaaggtg atataacctt tacaaactcc cgtttcttca gcaactagga cgatacgttc
    15661 tcccttttct tgttccctta aatagttggt taaaatctct ttgcgggagg gccaaccttg
    15721 cttctggaag gcctcatcaa gttgaagtaa atgctcaaat tgtaacggaa caatcatctt
    15781 aatcctccct caacgcttca aacttagctt tcatggttgg gttattgcgg gttagttttt
    15841 tgacggagac atcgtctagt ttattattgg ctaggcgaag ctggttttcg ctggtggtca
    15901 gggctgcctt gacagcctcc attcgcttga ttgccttatc gatttcatca atagcttttt
    15961 ggaaattgtt gctggccgat tgatagtttt tggcaaaagc attcttgaaa atttccaaat
    16021 cttcttcaaa atgagtaata tcaatattct gctccttaac caaggctaac tcctgctgat
    16081 attgcagact attgagcgca gcatttcgta aaattccgat taattggata aagaactgtg
    16141 gtcgaataac atacatcttc tcatattcat gactaacatc cacaatccct gtattgtaat
    16201 agtcattgtc cgcctctagc atgctgacta atacagcata ttcgcatttt ttctcccgac
    16261 ggtccttatc caactcctta aagaaatcag cgtttttatg cttggtcttg gtcgtatctg
    16321 cctcgttttt catttcgaac atgatggaaa taaattccaa gcccgactcg tcaaaatcac
    16381 ggaagatgaa gtctcctttt gaaccggacg ctgatacttc gttgtccttc gcaaatttgg
    16441 catgtggaaa agcataggaa cgaaccttgt taaactccgc ctcagcaaat tgctccaagc
    16501 tctctccaat tgccttagta gactgctggg ccttgaaatt tttgtaaaat tccacctgct
    16561 catccgccgc cttgagccgt acttcgtact cctgacgagt ggtcgctagg gctaactctt
    16621 gcttttgttc ctgcaaaacc aaagcatttt gtgccgcatc ccgctctttt tccacctgag
    16681 ctaccgcctg ctgcaactcc aagtccttgg caagaccgat ttgccccaac tgagccttaa
    16741 gctcttggat ttcttggtct ttttgggaaa tagcagagct gatttccagt tccgtctgac
    16801 tagcaaattt atcaagtttt gcggtcagtt ccagaatctc cttatcctta tcactcaatc
    16861 tagcctgcaa atcattttca gccttctggc ttaataattc ccgttcccgc tccaaacggt
    16921 cgtggatttc cttgtcaaac tccgcaccac gcacctgggc taaaagctga ctatattctg
    16981 tttcattgac ctgaaaggcc gtcccacaat gggggcaagt aatttgatgc atatactctc
    17041 actttcttct tttcaaataa gatattaatt tatgtaaaac cgccagcgtc aataaaaaat
    17101 aaaagaaacg aaccacattt ctagcatctg gaagtgatag agcccaaagg acaaaaatcg
    17161 ttatagcagt cggccatctc cagccccagg tcatcttccg tttgataaac cattccatcc
    17221 aatcttcatt agaatcaaac cgtgtttcat aatattcttc tttcagttgt tcccaccact
    17281 ttttcataac agcctccttt cagatcacag accttctaat tcaagctcca gaaaagtcct
    17341 ccacttttcc tgcaagggtt gacacacagg cggctcctga ccttctaaga attttttgat
    17401 acattcattt ggcaccaacc atcctgtcat gtctttttga gcattcgcaa attcattacc
    17461 aaaatcttct ggaattcgtt cttcaaaagt aattaaggtc tgattttcta gctgagacag
    17521 tgtaaatgaa actgttgctg aatcccacct gtaggcaatt ttctcatttt ttcgatattc
    17581 cagtaaatcc ataacttcac ggaatccttc catttcaaaa accagcgtat ttcctacaat
    17641 gttcaactgt ggaaaccagt gggcaaaacc actgtctgtc gccaacaagt cccaagcttc
    17701 tgtcaaacta gccgacacag aatagcaaat gctgagcagg tagtg
//
LOCUS       DASFQD010000041        17628 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.041, whole genome shotgun sequence.
ACCESSION   DASFQD010000041 DASFQD010000000
VERSION     DASFQD010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 17628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17628
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.041"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(3..2456)
                     /gene="parC"
                     /locus_tag="U1021_001065"
     CDS             complement(3..2456)
                     /gene="parC"
                     /locus_tag="U1021_001065"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HEM4711613.1"
                     /translation="MSNIQNMSLEDIMGERFGRYSKYIIQERALPDIRDGLKPVQRRI
                     LYSMNKDGNTFDKGYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQDWKNREILVEMH
                     GNNGSMDGDPPAAMRYTEARLSEMAGYLLADIEKKTVPFAWNFDDTEKEPTVLPAAFP
                     NLLVNGATGISAGYATDIPPHNLAEVIDAVVYMIDHPTAKLEKLMEFLPGPDFPTGAI
                     IQGADEIKKAYETGKGRVVVRSRCEIEQLKAGKKQIVITEIPYEVNKAVLVKKIDDVR
                     VNNKVPGIAEVRDESDRTGLRIAIELKKDSDEQTILNYLYKYTDLQINYNFNMVAIDN
                     FTPRQVGLQKILSSYIAHRREIIIARSKFDKEKAEKRLHIVEGLIRVISILDEVIALI
                     RASENKADAKENLKISYDFSEEQAEAIVTLQLYRLTNTDIVTLENEEAALREQIQTLA
                     AIIGDERTMFNLMKKELREVRKQFGNPRLSELQDQAEAIEIDTASLIVEEETFVSVTK
                     AGYIKRTSPRSFGASTVEEVGKRDDDQLIFLQNAKTTQHLLLFTNLGNVIYRPVHELT
                     DIRWKDIGEHLSQTLMNFETNEEIIFAELVENFEEGTYFAVTKYGQIKRVERKEFAPW
                     RTYKSKSTKYAKLKDAEDVVITVSPVVLDDIMLITEKGYALRFNIEEVPIIGAKAAGV
                     KAVNLKDEDVVVAAFISKTSSVYLLTQRGSLKRMATEEIPVTSRAKRGLQVLRELKSK
                     PHRVFAAGPVLTDQGDFDLFSTTNEDETTSQIFHVQSKTGKLYDVDVTQLSLSERTSN
                     GSFISDTISDEEVFRAWID"
     gene            complement(2817..3524)
                     /locus_tag="U1021_001066"
     CDS             complement(2817..3524)
                     /locus_tag="U1021_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009755322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEM4711614.1"
                     /translation="MENYIKTLEAERIETLEAERIETLEAYLTVTGLKEYHLTKNDEK
                     ILDRFAKLSDTESRVEYLGTYTLSDLFYLNSSKRKYNANSIEFGGEFPYVARGESNNG
                     IRGYITEPEEFLNPAGSISFGQDTATMFYQKEAYFTGDKIKILQAKDIELDRFTGQYI
                     ITAMRKSFSTFSWGSSSFNEHVLKSVEVSLPTQNNQPDYTFMSDFIKVIEKLVIKDLV
                     EWTDKKIQATKEVVAQH"
     gene            complement(4025..6049)
                     /locus_tag="U1021_001067"
     CDS             complement(4025..6049)
                     /locus_tag="U1021_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEM4711615.1"
                     /translation="MDWKLESDVNDWVKGQLDRIGLRKLQDYNEESGMSPYMREALRG
                     SAKTESKANFGKPDFHVEKYSRPVIFENKFSAKKLLAENKDGIKQDDSSVSAYAVNGA
                     LYYARNMIASGKYSEVFAIGVAGDNEENVSLKVYYVFGSALNAYKELTTVQTLDFLEN
                     EKSFETFYKNAVLTEEEKHQILIDSQAVLQSYAKKLNRLMHNHNITAPQRVLYVSGML
                     LAMQDIEMLTPNGDKIKLDDGLIPDNLLGKQVKDKHDGELIVTHISNFLENRGIEKTK
                     RDLMISSFKEISKDAQRDEKTDLDKEVAKLIDGQASVTKQIFTFIYEYIFKAIDGLGG
                     HIDIMGEMYSEFLKYALGDGKEIGIVLTPPYVTKMMSQILAIKKDNKVMDLATGSAGF
                     LISAMELMIEDANAIFGKATTAANEAIDALKKNNLLGVELNAEMFTLAATNMILRGDG
                     SSRIEKGSAFNRPESLFENFKADRLLLNPPFSYDENGLPFLEHGLDKMEKGSLGAIII
                     QDSAGSGKATKTAQSILKKHTMLASIKMPVDLFVPMAGVQTSIYIFEAKTPHDVERPV
                     KFIDFRNDGYKRAKRGISEVDSPVQRYQDIIKIYKAGSRAKVEADWDLDAVYIEDFIS
                     LNGNDWNFEQHQVIDTKPTLEDFKKTVADYLSWEVTQLLQQKGEDVTKKP"
     gene            complement(6053..6613)
                     /locus_tag="U1021_001068"
     CDS             complement(6053..6613)
                     /locus_tag="U1021_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HEM4711616.1"
                     /translation="MLEKVERFIAEINRIDRELFQDYFETGKVEKVNLKHTFTKVPTQ
                     PILAYRLNLHESINDYLMRADVKDIAYFYRVKTSESILDKIERFKERNEGYPVNSILN
                     DIFGARMILTSEEIAEVMERLDDWQEKYGLKNWYLRDKDDYVGIHIYFKNKSNFYYPW
                     ELQLWDEKDVDGNIASHIKYKRKFVG"
     gene            complement(6640..7143)
                     /locus_tag="U1021_001069"
     CDS             complement(6640..7143)
                     /locus_tag="U1021_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1232 domain-containing protein"
                     /protein_id="HEM4711617.1"
                     /translation="MPLRVKLTDRFQKRLSEWARKRKPFKNKQELEEKFDQALETWKS
                     SKTRERAEALLSDQGKLEHFLQDIEKKLARLPFGGDKFSAIPGLISMVRSYIRRDYSK
                     LPKGTILAIIGALIYFFSPIDALPDFILGAGLLDDAFVLNACLKLIKTDVDDFRNWQA
                     SQRKLEE"
     gene            complement(7176..7778)
                     /locus_tag="U1021_001070"
     CDS             complement(7176..7778)
                     /locus_tag="U1021_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016176895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEM4711618.1"
                     /translation="MVLENKLGIENSAELARLEEQISKKKAAQLFETGQLFQIEVGTF
                     AGLVHIHQALFEDIYDFAAKIRDVNIAKDNFQFAPRIFLEQSLAHIDKLPHTTFDEIV
                     DKYADMNIAHPFREGNGRSMRIWLDCMLRDSLGKVVDWNSIDKDEYFNAMVRSHVSTG
                     ELKYLLLQALTEDLGQATYFKGIDHSYYYEGYNLYRTEDL"
     gene            complement(7802..9751)
                     /gene="parE"
                     /locus_tag="U1021_001071"
     CDS             complement(7802..9751)
                     /gene="parE"
                     /locus_tag="U1021_001071"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEM4711619.1"
                     /translation="MAKKEININNYNDDAIQVLEGLDAVRKRPGMYIGSTDGNGLHHM
                     VWEIVDNAVDEALSGFGDRIDVTINKDGSLSVSDRGRGMPVGMHATGKPTVEVIFTVL
                     HAGGKFGQGGYKTSGGLHGVGSSVVNALSSWLEVEITRDGAVYKQRFEQGGKPVTTLE
                     KIGTAPKSKTGTKVTFMPDDTIFSTTDFKFNTIAERLKESAFLLKQVTMTLTDERTSE
                     QEEYHYENGVQDFVSYLNEDKETLTPVLYFEGEDAGFQVQVAMQYNDGYSDNILSFVN
                     NVRTKDGGTHETGLKLAITKAMNDYARKTNLLKEKDKNLEGSDYREGLSAVLSILVPE
                     EHLQFEGQTKDKLGSPLARPVVDGIVSDKLTFFLLENGELASNLVRKAIKARDAREAA
                     RKARDESRNGKKNKKDKGLLSGKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQ
                     AILPLRGKVINTAKAKMADILKNEEINTMIYTIGAGVGSDFTIEDVNYDKIIIMTDAD
                     TDGAHIQTLLLTFFYRYMRPLVEAGRVYIALPPLYKMSKGKGKTEKIAYAWSDGELED
                     LRKDFGKGFILQRYKGLGEMNADQLWETTMNPETRTLIRVTIEDLARAERRVSVLMGD
                     KVEPRRKWIEDNVKFTLEEATAFTK"
     gene            9894..10538
                     /gene="plsY"
                     /locus_tag="U1021_001072"
     CDS             9894..10538
                     /gene="plsY"
                     /locus_tag="U1021_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEM4711620.1"
                     /translation="MLLNCILLIVAYLLGSIPSGLWIGQAFFKINIREHGSGNTGTTN
                     TFRILGPKAGTIVFVVDFLKGTLAALLPLIFHAQGISPIVFGLMAVLGHTFPIFAQFK
                     GGKAVATSAGMLLGVSPAFCLYLVLIFASSLYLTSMVSFSSVLAAALAILGALLFPAL
                     GIILPSYDWLFTVIIVFLGSFVIIRHKENIQRILKKEENLVPFGLNLTKQKKRV"
     gene            complement(10549..14202)
                     /gene="addA"
                     /locus_tag="U1021_001073"
     CDS             complement(10549..14202)
                     /gene="addA"
                     /locus_tag="U1021_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddA"
                     /protein_id="HEM4711621.1"
                     /translation="MAFEEFLSAEEIKALQLAEANSDKQQKRTPEQIEAIYTHGQNVL
                     VSASAGSGKTFVMVQRILDKLKRGVGIDQLFISTFTVKAASELKERIEKNLNETIAET
                     TDMDLRRHLSAQLADLTKADIGTMDSFTQKLVTTYGYSLGISPKFRILQDETEKASLK
                     KEVFDQLFADYLEQDENGAFRKLVRNFSGNRKDNSGFRQVVYQVHDFSQSTSSPTKWL
                     KEQAVQADLYSQERIELILEQGFKEKVLDKLYQAADFFRYHVEWGRNDFGSAKYFANV
                     EEVLDLLTGLDSLDQKDLMERVEKVLLINDQSRGKGLTNANRPKDEHLIAFKEEYNAG
                     KSQIISGLRDLGQEVYELTLLKDYQIQALPMLILLRDFVLDFSQAYLDVKIKEAAFEF
                     GDIGHFAIRILEENVDIRQFFQEKYHEVMVDEYQDNNHSQERMLDLLSNGHNRFMVGD
                     IKQSIYRFRQADPMIFQEKFELYQADSQAGKLILLKENFRSQIEVLEATNAIFTRLMD
                     RQVGEIKYDETHSLVAGSPGQKIAQPKHEMEYLIYDQQDSANSSTDAEEETPLTAGEI
                     EVVAKEIIRLHNEEGADFKDITLLVQKRTHNDLIISIFEKHGIPIVADGGAASYLQSL
                     EVMIMLDTLRVINNPLNDYALVALLKSPMFRFDEDELTRISLQAGTGFFYQKMEIAQQ
                     TNGQHPELMSGELKKKIKDFLSILENWRAFAKMHSIYDLIWKIFNEKFYYDYVGALPN
                     GSKRQANLYALGLRANQFEKTGYKGLSRFIVMIDRALANDKDLADVQEFLPQNAVQLM
                     TIHKSKGLEFKYVFLMNIDKRFNLEDHYQSVIISRKNGLGIQYLADMKDKVNSPLPQV
                     RVLMNTLPYQDNLQELKIANLSEQMRLLYVALTRAEKKLYLVGKDNADKLAKKYDGKK
                     ADGVLAQSTRESVATFQDWILAIDEAFSGEDLHFKKVFVTDEDLTEEKIGKLILKSKL
                     EDASLKDIRQSEDIAQALDQLSSVQELNERYKAAIELPSLRTPSQIKKLYEPILEQEG
                     MEVMEKYQPKRTFNLPDFSKKPKIAGAQVGSAVHELMQRLDLSWLVTEDTVREALEAV
                     HAEQAVKDKINVHIILDFFDTDLGREILANTDKLHREAPFASLQTDPVSQEQFVLRGI
                     IDGFLLYDDHIVLFDYKTDKYDQPIQLSQRYQAQMQLYAEALKKAYKIDRVDCHLILL
                     GGERIEVVEVKVN"
     gene            complement(14202..17468)
                     /gene="rexB"
                     /locus_tag="U1021_001074"
     CDS             complement(14202..17468)
                     /gene="rexB"
                     /locus_tag="U1021_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent nuclease subunit B"
                     /protein_id="HEM4711622.1"
                     /translation="MKLVYTDIRNPLTQYLTDTSAEFAKEAKRVFYIAPNSLSFEMER
                     KVLEYLPEQATFDIIVTRFGQLARYLMIDRKEAGQPLDDVGLAMIFFRVLSQFEDGDL
                     KVYGRLQRDFGFINQLVALYKELQRANMSILDLEAMDSPDKQADLVKIFLAVTDILSK
                     ESFEHQSKLAQLTGLVETGQLDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILI
                     GVYASKKAVQVIYAEGNVYQANVDFLRQLSAQFQTKATYIGQEPVLDSIGKFSKNMEA
                     YYDYSGTMIDLTPADQEKIQLWEVVNQKEEVEQVATAIRQHIHQGARYKDILLLLGDV
                     DSYKLQIGKIFDKYDIPYYFGKAEEMSHHPLVHFVESLERLRRYRFRAEDLLNLLKSG
                     LYASISQKELDLFESYILFADMKGQAAFSRAFVANSRADYDTEVIKEKRLVYDLNVLE
                     PLRAKIMEPLNQLFKAGPQSGAALLEKFMAFLEAIELPKNMEKMSRNLSEVEQEKEEQ
                     VWKSFTHLLENFHQIFGKEKLKMDDFLAILQAGMQASHYRTVPATVDVVNVKSYDLIE
                     PHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKVNLVSASSSRFDLVSRENIKKNHA
                     AMMSLLNAATEQLVISTPQIYNEGEDSLSPYIKILQKMGLKSEERGRIKTLSPQDIGH
                     YKSLLSRLIESERPSLETEEWEGQRAFWTVLVRHLKKKLESQGIEIPTITGDIASKQL
                     SDETLAALYPEDKPLNLSASSLTNFYNNQYLYFVHNVLRLREQESIHPTAFQHGLFLH
                     RIFERVVMDQSELDFDQKVDKAILRTRDEAEFAMFYNQDADARYTEEVLDKIARSSAT
                     ILRDNDLVEIDGQEKSFRQDKALVFDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKS
                     SDQSFSVGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQDPIIKLKDTKNLE
                     QLEGAANTSLVYKGLFLKEESLGLNHFYQTRNQLYTEDEFAVLLNHNQELYKQAAMDI
                     LAGRFAINPYTKDGRSVAGEQLKAITGFEADRHMGMARRLVKEAKRQDWMERMKGGPD
                     "
BASE COUNT         4707 a         4148 c         3460 g         5313 t
ORIGIN      
        1 ttttagtcta tccaggctct gaagacttcc tcatcagaaa tggtgtctga aataaagcta
       61 ccgttgctgg ttcgttcgga caggctaagc tgggtcacat cgacatcata gagtttaccc
      121 gttttggact gcacgtgaaa gatttgactt gtcgtttcat cttcatttgt cgtgctaaag
      181 agatcaaaat cgccctgatc cgtcaagact ggacccgcag caaagacacg gtgcggttta
      241 gacttgagct ctcgcaaaac ctgcaaacca cgcttggcac ggctggtcac agggatttcc
      301 tccgtcgcca tccgcttcaa actaccacgc tgagtcagga gatagacgga gctggttttg
      361 ctgataaagg ccgcaaccac cacatcctcg tccttgaggt tgaccgcctt gacaccggcc
      421 gccttggcac cgatgattgg cacttcttcg atgttaaatc gcagagcgta gcccttttct
      481 gtgataagca taatgtcgtc caagaccaca ggtgatacag taatgaccac atcctccgca
      541 tctttgagtt tggcatactt ggttgacttg gacttgtaag ttcgccaagg agcaaactcc
      601 ttccgctcca cacgcttgat ttgaccatat ttggtcaccg caaaataagt tccctcctca
      661 aaattctcca ccaattcagc aaagataatt tcttcattgg tctcaaaatt catgagtgtc
      721 tggctaaggt gttcaccaat gtccttccaa cgaatatctg tcaactcatg gacaggtcgg
      781 tagatgacat ttccaagatt ggtaaagagc aagaggtgct gggttgtctt ggcattctgc
      841 aagaaaatca gctgatcgtc atcccgcttg ccaacttctt ccaccgttga agcaccgaaa
      901 gaacgcggac tagtccgttt gatatagcca gccttagtca cgctgacaaa agtctcttcc
      961 tcgacaatca agctagcggt atcaatctca atcgcttctg cttgatcttg taactcactc
     1021 aaacgaggat taccaaattg cttcctgacc tcacgcagtt ctttcttcat gagattgaac
     1081 atggtccgtt cgtcgccaat aatggctgcc aaggtctgaa tctgctcgcg tagagctgct
     1141 tcttcatttt ccaaggtcac aatatcggtg tttgtcaaac ggtaaagttg caaggtcacg
     1201 atagcctcag cctgttcctc gctgaaatca tagctgattt tcaagttttc cttggcatcc
     1261 gccttgtttt cagaagcacg gataagagca ataacctcgt ccaagatgga aatgacacgg
     1321 atcaaacctt ctacgatatg gaggcgtttt tctgcctttt ccttgtcaaa cttagaccgg
     1381 gcaatgataa tctcacggcg gtgggcaatg tagctggaca gaatcttctg caagccaacc
     1441 tgacgtggtg tgaagttatc aatggccacc atgttgaagt tgtaattgat ttgcaggtcg
     1501 gtgtatttgt agaggtagtt gagaatggtt tgctcatcgc tgtctttttt cagctcaatg
     1561 gcaatccgca gacctgtccg gtctgactca tcacgcacct cggcaatacc aggcaccttg
     1621 ttgttgacac ggacatcatc aattttcttg accagtacag ccttgttgac ctcgtaagga
     1681 atctcggtaa tgacaatctg tttcttacca gccttgagtt gctcaatttc acaacggcta
     1741 cggacaacga cacgtccctt accagtttca taggctttct tgatttcgtc agccccttgg
     1801 ataatggcac ctgttgggaa gtcaggccca ggcaagaact ccatcaactt ttctaactta
     1861 gcagtcggat gatcaatcat gtaaacaacg gcatcgatga cctccgccag attatgcggc
     1921 gggatgtcag tcgcgtatcc tgctgaaatt cctgtcgctc cattgaccaa gagattaggg
     1981 aaggcagctg gtagcacagt gggctctttt tccgtatcgt caaagttcca ggcaaatggt
     2041 accgtctttt tctcgatgtc ggccagcagg tagcctgcca tctccgagag gcgagcctcg
     2101 gtgtaacgca tggctgcagg cggatcgccg tccatggaac cgttgtttcc gtgcatctcc
     2161 accaaaatct cacggttctt ccagtcctgg ctcatgcgga ccatggcatc ataaatagaa
     2221 gaatcaccgt gcgggtggaa attccccatg atattcccga ctgacttggc ggacttacga
     2281 tagcccttgt caaaagtatt gccgtcctta ttcatggaat aaagaatccg acgttgcacg
     2341 ggcttgagac cgtcacgaat gtccggcaaa gcccgctcct gaataatgta tttggagtag
     2401 cgaccaaaac gctctcccat gatgtcctca agggacatgt tttgaatgtt tgacataaat
     2461 taagatacaa agcccgtaaa agacaaagtc aaaataggaa atcggcagaa aatcctgatt
     2521 ttcaagacga tttatctttt tgacacagcc tttagggcgt gttcagttgg ttctactaac
     2581 tgaacattcc tttctttgtt tcttgacgga aagtttatct ttctttttta cttttttgat
     2641 aatcgcctta ggtagtgggg acggaagcga cctcctgcgg agttccattc ctaagttgga
     2701 agccgaagtc ttccaacttc cctgaagcta ataaccttgt tattagcttc tttcactacg
     2761 gcggcgatta tccattttga gctcgctaac gctcgcttgc atgccgtagc aaaatgttaa
     2821 tgttgagcaa caacctcttt tgttgcttgg attttcttgt ctgtccattc aaccaagtct
     2881 ttaatcacca atttttcgat aactttaatg aaatcggaca tgaaagtgta gtcaggttga
     2941 ttgttttggg taggtaaaga aacttcaacg cttttcagta catgttcatt aaaagaacta
     3001 ctaccccaac tgaatgtaga aaagcttttt ctcatagcag ttataatgta ctgaccagta
     3061 aatctatcta gttcaatgtc ttttgcttgt aaaattttaa ttttatctcc agtaaaataa
     3121 gcttcctttt gataaaacat cgttgctgta tcttgcccaa aactgattga acctgcagga
     3181 tttaaaaact cttctggttc agtaatatac cctctgatac cgttattgct ttctcctctc
     3241 gcaacatatg gaaattctcc tccaaattca attgaatttg cattatattt cctcttgcta
     3301 ctgttgagat aaaataaatc cgatagggta taagtaccca aatactctac tctactctca
     3361 gtatcggaga gtttagcaaa tctgtcaagt attttctcat cattttttgt aagatgatac
     3421 tctttaagtc cagttactgt taggtaagcc tcgagcgtct cgatgcgttc agcctcgagc
     3481 gtctcgatgc gttcagcctc gagcgtcttt atgtaattct ccatatatga aaatgctatc
     3541 tttccgttaa tagtcggaag ctcaaaaaat tctctcctaa cttttgtcca aacagcctta
     3601 ttctcccaac caaaacgcag tttaatcgat ttctctaaag ctgaagatat aaatatcaag
     3661 tgctctggaa gaatttcttt cttaaatttt attaaataag catcccatag aacacctact
     3721 ttctttattt gtggatatac agtacctgtt gctacagcac cattgctaat gatatcaatg
     3781 gtcatttcag cactatcaaa atcttcctca cgaccataaa acataatacc attattacca
     3841 agctttgcat taacaagtgg aagactaaat tccatactct gcaccttaga agtgtctttt
     3901 aatttatcaa aattctttct atgacatttt aattctaatt tttcaaataa atctccgata
     3961 cgatactccc gccactctcc ccctgcctct tcaaactctt tgtctagttt ggctaggcga
     4021 gggcttaggg cttttttgtg acgtcttctc ctttttgctg gaggagttgg gtaacttccc
     4081 aagaaaggta gtcagcaacg gtctttttga aatcctctaa ggttggtttg gtatcaatga
     4141 cttggtgctg ttcaaaattc caatcattac catttagact gataaagtcc tcgatataga
     4201 cagcatccaa atcccaatct gcctctactt tagctcgact gcctgccttg taaatcttga
     4261 tgatgtcttg ataacgttga acagggctat ccacttctga aatcccacgt ttagcgcgct
     4321 tgtagccatc atttctgaag tcaatgaatt tgacagggcg ttctacatcg tgaggggtct
     4381 tagcttcaaa aatataaatt gacgtctgca cccctgccat tggcacgaaa agatctactg
     4441 gcatcttgat tgaggcaagc atggtatgct ttttaagaat agattgggct gtcttggtag
     4501 ctttaccaga acctgctgaa tcttggatga taatcgcacc taagcttcct ttttccatct
     4561 tatcaagacc atgttctaag aaaggcagtc cattttcatc ataagaaaaa ggtgggttca
     4621 acaacagacg gtcagccttg aagttttcaa agagactttc tgggcggtta aaggctgaac
     4681 ctttctcaat acgacttgaa ccatcaccac gtaaaatcat gttggtcgcc gccaaagtaa
     4741 acatctctgc gtttagctca acgccgagaa gattgttttt cttgagtgca tcaatagctt
     4801 catttgcggc cgtggtcgcc ttaccaaaga tagcgttggc atcttctatc atcaattcca
     4861 ttgcagaaat caagaatcca gcagaacctg tcgccaagtc cattactttg ttatcttttt
     4921 tgattgctaa aatctgtgac atcatcttgg tcacataagg cggcgttaag acaatgccaa
     4981 tttccttacc atctccgaga gcatacttga gaaactcaga atacatttcc cccataatat
     5041 caatatgacc acccaaaccg tcaatggctt tgaagatgta ttcgtagata aaggtgaaaa
     5101 tttgtttggt cacacttgcc tgaccatcaa tcaacttggc aacttcttta tcaaggtctg
     5161 tcttttcgtc acgctgagca tcttttgaaa tttccttgaa agaggaaatc atcaagtcac
     5221 gcttggtttt ctcaatccct ctgttttcta gaaaatttga aatatgcgtt acaatcaatt
     5281 cgccatcatg cttgtctttg acttgtttcc ctaataaatt gtcaggaatt agaccgtcgt
     5341 ctaacttaat tttgtcacca tttggagtaa gcatttcaat atcttgcatg gccaaaagca
     5401 taccagatac atagagaact ctctgtggag cagtgatatt atgattgtgc atcaggcgat
     5461 tgagtttctt ggcataactt tgcaagaccg cttgactatc aattaaaatc tgatgttttt
     5521 cttcttctgt cagaacagcg ttcttgtaaa acgtttcaaa acttttttca ttttcaagaa
     5581 aatcaagagt ttgaacggtt gttaattctt tataggcatt tagagcagaa ccgaagacat
     5641 agtaaacttt gagagaaaca ttttcttcgt tgtcaccagc cacaccaatc gcaaagacct
     5701 cgctgtattt accagaagca atcatatttc tagcataata cagagcacca ttaactgcat
     5761 aagcagaaac agaactatca tcttgtttga taccgtcttt attttcagca agtaattttt
     5821 ttgctgaaaa tttattttca aagataacag gacgactgta tttttctaca tgaaaatctg
     5881 gcttaccaaa attagcttta gattccgttt tggcagaccc tctcagagcc tctctcatat
     5941 aaggactcat acctgattct tcattgtaat cttgcaactt tcgtaatcca atacggtcta
     6001 actgaccttt tacccagtca ttaacatctg actctaattt ccaatccatt tttcacccca
     6061 caaacttcct tttatacttg atatgactgg cgatattgcc atcgacatcc ttctcatccc
     6121 agagttgcaa ttcccacgga taataaaaat tactcttatt tttgaaatag atatgaatgc
     6181 cgacatagtc gtccttatct cgcagatacc agtttttcag tccatatttt tcctgccagt
     6241 catccagacg ctccatgacc tctgcgattt cctcagaagt caaaatcata cgagcaccga
     6301 aaatatcatt gagaatggag ttgacaggat atccctcatt tctctcctta aaacgctcaa
     6361 tcttatccaa aatggattcc gatgttttga cacggtaaaa ataggcaatg tccttcacat
     6421 cagcacgcat caagtagtca ttgatagatt cgtgtaagtt gagtcgataa gccagaatag
     6481 gttgagttgg caccttagta aatgtatgtt tgagattgac tttttcaacc tttcccgttt
     6541 caaaatagtc ctggaaaagc tccctgtcaa ttctgttgat ttcagcaata aatcgctcga
     6601 ctttttctaa caatttctgc tccttttgtc atagcagagc tactcttcca atttccgctg
     6661 acttgcctgc cagtttctga aatcatcgac atctgttttg attaatttca aacaggcatt
     6721 aaggacaaag gcatcatcaa gtagacctgc tccaaggatg aaatctggta aggcatcaat
     6781 aggactaaaa aaataaatca aagcacctat aattgcgaga attgtccctt tgggtaactt
     6841 gctgtaatcc ctacgaatat agcttcgcac catggaaatc aagcctggaa tggctgaaaa
     6901 cttgtccccg ccaaatggaa gtcgcgccaa tttcttctcg atatcttgta gaaaatgttc
     6961 caatttccct tgatcagaca acaaggcttc tgcccgttct ctagtcttgg aggatttcca
     7021 agtttcaagc gcctggtcaa acttttcttc taattcctgt ttgtttttaa atggcttgcg
     7081 ctttcgagcc cattcagaca accgtttttg aaaacggtca gttaatttta ctcttagtgg
     7141 cataaaacac ctcacatagt ttgcttctgc tagagttaca aatcctctgt gcgatagaga
     7201 ttgtatcctt catagtaata agaatggtcg atgcctttga aataagtagc ctgaccaaga
     7261 tcctccgtta aggcttgcaa taacagatat ttaagctctc ctgttgacac atggcttcta
     7321 accattgcat tgaaatactc atctttatca atgctattcc agtcaacaac cttacccaaa
     7381 ctatcccgta gcatacaatc caaccagata cgcatactac gaccatttcc ttcacggaag
     7441 ggatgtgcga tgttcatatc tgcgtacttg tcaacaatct catcgaaagt agtatgaggt
     7501 agcttgtcaa tgtgagccaa tgactgctcc agaaaaatac gaggggcaaa ttgaaaatta
     7561 tctttggcaa tattaacatc gcgaatctta gctgcaaagt cgtaaatatc ctcaaataaa
     7621 gcctgatgaa tgtgtaccaa acctgcaaaa gttccaactt ctatctggaa cagttggcca
     7681 gtttcgaaca gttgagctgc ttttttcttg ctgatttgtt cctcaagacg ggctaattca
     7741 gccgaatttt caatccccaa tttattttct aaaaccatat ggcacctcaa cttccctgag
     7801 attatttagt aaaagctgtt gcttcctcca aggtaaactt aacattgtcc tcaatccact
     7861 tgcggcgtgg ctcgaccttg tcgcccatga ggacggacac acggcgttca gcacgggcta
     7921 ggtcttcaat ggtaacacgg ataagagtac gagtttcagg gttcatagtt gtttcccaga
     7981 gctgatcggc attcatctca ccgagcccct tgtagcgttg gaggataaag cccttgccaa
     8041 aatccttgcg gagatcttca agttctccat cagaccaagc gtaggcaatc ttttcagtct
     8101 tgcccttgcc tttggacatc ttgtagagcg gcggaagggc aatgtaaacc cgtcctgctt
     8161 ctaccaatgg tcgcatataa cgatagaaga aggtcagcaa gagggtctga atgtgggcac
     8221 cgtccgtatc cgcatcggtc atgataataa tcttgtcata gttgacatct tcgatagtga
     8281 aatctgaccc aacacctgca ccaatggtgt aaatcatagt gttgatttct tcgtttttga
     8341 ggatgtctgc catcttcgcc ttggcggtat tgataacctt acctcgcaag ggtagaatgg
     8401 cttggaactt gcggtcacga ccctgtttgg cagagcctcc ggccgaatct ccctcgacca
     8461 gatagagttc gtttttggct ggatttttag actgagctgg ggttagctta cctgacagaa
     8521 gacccttgtc ctttttgttt ttcttaccat ttcgagattc gtcacgtgcc ttacgagcgg
     8581 cctcgcgggc gtcacgtgcc ttaatagcct tgcgaactag attagatgct agctcaccat
     8641 tttccaaaag gaagaaggtc agcttgtccg atacaatgcc gtccaccaca ggacgagcaa
     8701 gcgggctgcc cagcttgtcc ttggtctgtc cttcaaactg caaatgctct tctgggacaa
     8761 ggattgagag aaccgcagac aaaccttcac ggtagtcaga accttctaag ttcttgtcct
     8821 tttccttgag caagttggtc ttgcgggcat agtcgttcat ggccttggta atggctagtt
     8881 tgagacctgt ttcgtgggta ccgccgtcct tggtccgaac gttgttgaca aaggatagga
     8941 tgttgtctga atagccgtcg ttgtactgca tagcaacttg tacttggaat cctgcatctt
     9001 ctccttcaaa atagaggact ggtgtcagag tttccttgtc ttcgttgagg taggatacaa
     9061 agtcctgaac gccattttca tagtgatact cctcctgctc actagtccgc tcatctgtca
     9121 aggtcatggt gacttgtttg agcaagaagg ctgattcttt caggcgttcg gcaatggtat
     9181 tgaacttgaa atcagtcgtt gagaagatgg tatcatcagg cataaaggtg acttttgtac
     9241 ctgtttttga ttttggtgcg gtaccaatct tttctagggt cgtgactggc tttccgccct
     9301 gctcaaatcg ttgcttataa acagctccgt cacgggtaat ctcaacttcc aaccagctgg
     9361 acagggcatt gaccaccgaa gaaccaaccc cgtggagacc acctgaagtc ttgtagccac
     9421 cttgaccgaa cttaccacct gcgtggagaa cggtgaagat aacttcaacg gttggcttgc
     9481 ctgttgcgtg catgccgaca ggcattccac gtccacggtc ggaaacggac aaactaccat
     9541 ccttgttaat ggtcacatca attcggtcac caaatccaga caaggcttca tcgacagcgt
     9601 tgtctacaat ctcccagacc atgtggtgaa ggccattccc atctgtggat ccgatgtaca
     9661 ttccggggcg tttgcggacg gcgtccagcc cttccaatac ctgaatggca tcatcattat
     9721 agttatttat attaatctct ttcttagcca aaactgacct ccatacttat catcctttct
     9781 atattacaag tttttgggca tttttgcaaa atttttctgc tgtctttcgg atggaacagg
     9841 gcaaacagaa gtattttacg aaaaatcaat tgaatttgtg gtataatgag agcatgttat
     9901 tgaattgtat tttattgatt gtagcctatt tgttgggctc tattccgtca ggtctctgga
     9961 ttggacaggc atttttcaag attaatattc gcgagcatgg ctctggaaat acgggtacga
    10021 ccaatacttt tcgtattctt gggccaaaag ctggaacgat tgtatttgtt gttgattttc
    10081 tcaagggaac gttggcagcc ttgcttccgc tgatctttca tgcccaagga atttctccga
    10141 ttgtatttgg gttaatggct gtactggggc acactttccc tatctttgcc caattcaaag
    10201 gcggtaaggc tgttgcaaca tctgctggca tgttgttggg tgtctcacct gctttctgcc
    10261 tctatctcgt tctaatcttt gccagttcac tctacttgac gtccatggtt tccttctcta
    10321 gcgtcttagc agcagcctta gctatcttag gagctctgct atttccagca ttaggaatca
    10381 tcctgccaag ctacgactgg ctctttacag tgattatcgt ctttcttggc agttttgtca
    10441 tcatccgtca caaggaaaat atccagcgga ttttgaaaaa agaagaaaat cttgtcccat
    10501 ttggactcaa tctaaccaaa cagaaaaagc gagtttaacc actcgctttt aatttacctt
    10561 gacttcgacc acttcaatcc tctccccacc aagcaaaatc aaatggcagt ctacacgatc
    10621 tatcttgtag gcttttttca atgcctccgc atagagttgc atttgagctt ggtaacgttg
    10681 gctgagttgg attggttggt catatttgtc tgtcttgtaa tcaaagagga caatatgatc
    10741 atcatatagt aggaagccat cgataatccc acgaaggaca aattgttcct gtgatacagg
    10801 atcagtctgc aaacttgcaa atggagcttc tcggtggagt ttgtccgtat tggctagaat
    10861 ttctcttcct aagtctgtat caaagaaatc caaaataata tgaacattga ttttatcttt
    10921 aaccgcttgc tcagcatgaa cagcttctag agcttctctt accgtatctt cagtcaccaa
    10981 ccaagacaga tccaagcgtt gcatgagttc atgcactgct gaaccgactt gggctccagc
    11041 gatttttggt ttcttggaga aatctggcaa gttgaaggtc cgtttgggct ggtatttttc
    11101 cataacttcc atgccttctt gttccaaaat aggctcatag agtttcttaa tttgacttgg
    11161 agtccgtaaa cttggcaatt ctatagcagc cttatagcgt tcgttcaact cttggacaga
    11221 agacaactgg tccaaggcct gggcgatgtc ttctgattga cgaatatctt taaggctggc
    11281 gtcttctagc ttactcttca atataagttt gccaatcttc tcctccgtca aatcctcatc
    11341 cgtcacaaag actttcttga agtgcaagtc ttctcctgaa aaggcctcat caatggctag
    11401 aatccagtct tggaaggtcg ccacgctttc acgagttgat tgggctagta cgccatctgc
    11461 ctttttgcca tcgtattttt tagctaactt atcagcattg tcctttccaa ccagatacag
    11521 cttcttctcg gcacgcgtta gtgcaacata aagcaaccgc atttgttctg aaagattggc
    11581 aatttttagc tcttggagat tatcttgata aggaagggtg ttcattaaga ctcgcacctg
    11641 aggtaatggg ctattcacct tatctttcat atccgctaaa tattggatac ctagaccatt
    11701 tttccggctg atgatgactg actggtaatg gtcttccaag ttgaatcgtt tatcgatgtt
    11761 catgaggaag acatatttga actctagacc ttttgactta tgaatggtca tcagctgaac
    11821 agcattttgc ggtagaaact cttgtacatc tgccaagtcc ttgtcatttg ctaaggcacg
    11881 gtcaatcatg acgatgaaac gagacaagcc cttgtagcct gttttttcaa actggttggc
    11941 acgcaaacct agggcatata gatttgcctg acgcttgctg ccatttggaa gagcaccgac
    12001 atagtcatag tagaattttt cattgaaaat cttccaaatc aggtcataaa tagaatgcat
    12061 tttggcaaaa gcacgccagt tttccaaaat agataagaaa tccttgattt tcttcttcaa
    12121 ctctcctgac ataagttcag gatgttgccc atttgtttgc tgggctattt ccattttctg
    12181 gtaaaagaaa cctgtcccag cctgcaagga aatccgtgtc agctcatcct catcgaatcg
    12241 gaacataggc gatttgagaa gagcaaccaa ggcatagtca ttgagtggat tattgataac
    12301 ccgcaaggta tccagcataa tcatgacttc taaagattgc agataggagg ctgctccgcc
    12361 atctgccaca attggaatcc catgtttttc aaaaatggat ataatgaggt cattgtgcgt
    12421 ccgtttttgc accaagagag tgatgtcctt gaagtctgct ccttcttcat tgtgaagacg
    12481 aataatctct tttgcaacaa cctcgatttc accagcagtc agaggtgttt cttcctcagc
    12541 atccgttgaa gagtttgcgc tatcctgctg gtcgtaaatc aagtattcca tctcatgctt
    12601 gggctgggca attttttgac caggactacc agccactaga ctgtgggttt catcatactt
    12661 gatttcccct acttgacggt ccatcaggcg cgtgaaaata gcatttgtcg cctccaagac
    12721 ctcaatctga ctacggaaat tttccttaag caaaatcaat tttccagcct gagaatctgc
    12781 ctggtaaagt tcaaatttct cttggaaaat catcggatcc gcctgacgga atcgatagat
    12841 ggactgctta atatcgccca ccataaagcg gttgtgaccg ttagacagca ggtccagcat
    12901 tcgctcttgg ctatggttgt tatcctggta ctcgtccacc atgacttcgt ggtatttttc
    12961 ttggaaaaac tggcgaatgt ccacattttc ttctaaaata cgaatagcga aatgcccaat
    13021 atcgccaaat tcaaaagctg cttccttgat tttgacatcc agataagcct gcgaaaaatc
    13081 caagacaaag tcacgtaata atatcagcat tggcaaagct tgaatctgat agtctttcag
    13141 cagggttaat tcataaactt cctgccccaa atctcgtagt ccagagataa tctggctctt
    13201 gccagcattg tattcttctt taaaggctat caaatgctca tcttttggtc gattggcatt
    13261 ggtcagaccc ttgcctctgg actggtcgtt gataagaagg actttttcaa cccgctccat
    13321 caagtccttc tggtccagac tatctaaacc tgtcagcaaa tctaaaactt cttccacatt
    13381 tgcaaaatac ttggcggaac caaagtcatt tctgccccat tccacatggt agcggaagaa
    13441 atctgcagct tgatagagct tgtctaacac tttttcctta aagccttgct ctaagatcag
    13501 ctctatacgc tcttgactgt acaaatcagc ttgaacagcc tgctctttca gccatttagt
    13561 tggactgctt gtcgattggc taaaatcatg cacctgataa acaacctgac ggaaaccact
    13621 attatcctta cggttgcccg aaaaattgcg aaccagtttg cggaatgcac cattttcatc
    13681 ctgttcaaga taatctgcaa agagctggtc aaagacctct tttttcagac tcgctttttc
    13741 tgtctcatcc tgtaaaatcc gaaacttcgg agaaatacca aggctataac cataggttgt
    13801 caccaatttc tgcgtaaagg agtccatggt cccgatgtct gccttggtca aatccgccaa
    13861 ctgggctgac aaatgccgtc gcaagtccat atccgtcgtc tccgcaatgg tttcattgag
    13921 atttttctcg atccgctcct tcaactcact agccgccttg actgtaaagg tcgagataaa
    13981 gagctggtca atcccgacgc cacgcttcaa cttatccaaa atccgttgaa ccatgacgaa
    14041 ggtcttgcct gacccagccg atgcagagac caggacattc tgaccgtgcg tgtagatggc
    14101 ttcaatctgc tcaggtgtgc gtttttgttg cttatcagaa ttagcttccg ccagctgcaa
    14161 agccttgatt tcttccgcgc ttaaaaattc ttcaaatgcc attagtccgg acctcctttc
    14221 attcgttcca tccaatcttg acgcttggcc tccttgacca accgccgcgc catgcccatg
    14281 tgccgatccg cctcaaaacc agtgattgcc ttcagctgct cacctgccac cgaacgccca
    14341 tcttttgtat aagggttaat agcaaagcga ccagccagaa tgtccatggc agcttgtttg
    14401 tatagttctt ggttgtggtt caataaaacc gcaaactcat cttccgtgta gagttggtta
    14461 cgagtctgat aaaaatgatt gagccccaga ctttcctcct tcaagaaaag ccccttgtaa
    14521 accaagctag tattggcagc tccttctagc tgttctaaat tcttcgtgtc ttttaatttg
    14581 ataatcggat cctgcaaatg caaatacata gctccaaaaa caggtttatc cttggtttca
    14641 tccagctctt gtaaggctgc caagtaggtc accaactgag gttttagacc attgtaaaaa
    14701 tccccaactg aaaaagattg gtcactggac ttgtaatcca caacaccgac agcctgatta
    14761 atttgtaagg tatccaagcg gtcaatggta ccatttacat gcacactctt gccattttga
    14821 aggtcaaaaa ctagcgcctt atcctgacgg aaactctttt cctggccatc aatttccacc
    14881 aaatcattat cccgcaaaat agtcgcactg gaacgagcaa tcttatccag cacctcctcc
    14941 gtatagcgag catccgcatc ttggttataa aacatagcaa attctgcctc gtcacgtgta
    15001 cgcagaatgg ccttgtccac tttttgatca aaatctagtt cagattggtc catgaccact
    15061 cgttcaaaaa tccgatgcaa gaagagcccg tgttgaaagg ccgtcggatg gatggattcc
    15121 tgttcccgca agcgaagcac attgtgtaca aagtaaagat attggttatt gtagaaattg
    15181 gtcaagctgg atgcagaaag attgaggggc ttatcctctg gatataaagc agccaaggtt
    15241 tcatctgaaa gttgtttaga agcaatatca ccagtaatgg tcggaatttc aatgccttgc
    15301 gactccaatt tcttcttcaa atggcgaacc aatactgtcc agaaggccct ctgcccttcc
    15361 cactcctctg tttcaaggct tggtctttcc gactcaatca aacgggataa gagactcttg
    15421 tagtgaccta tgtcttgcgg actaagtgtt ttaatccgac cacgttcttc ggatttcagc
    15481 cccatttttt ggagaatctt gatataaggt gagagactat cttcgccttc gttataaatc
    15541 tgaggtgtgg aaataactaa ctgttccgtc gcagcattaa gcagagacat catggcagca
    15601 tggttcttct tgatattctc tcggctgacc aaatcaaaac gtgaagaact agctgaaaca
    15661 agattgactt tttccatctc ttcttccgtc aatagactgg tattcttggc aacttttgga
    15721 aaattggact gtcccattcc gatagcataa acatactttg cagtgtgtgg ctcgatcaaa
    15781 tcataggatt tgacattgac cacatcaacc gttgcaggaa cggtacgata gtggctggcc
    15841 tgcataccag cctgtaaaat agccagaaaa tcatccattt tcaacttttc ttttccgaaa
    15901 atctgatgaa aattctcaag aagatgggta aaacttttcc agacctgctc ttctttttct
    15961 tgctctactt cgctcaaatt tcgagacatt ttttccatat ttttaggaag ctcaattgcc
    16021 tccaaaaaag ccataaattt ctcaagcaag gctgctccag attgtggtcc agccttaaac
    16081 aactggttca aaggttccat aatcttagca cgtaggggtt ccaaaacatt caaatcatag
    16141 acaagtcttt tctccttaat aacttcagtg tcatagtcag ctctgctatt ggccacaaaa
    16201 gccctcgaaa aagcagcctg ccccttcata tccgcaaaga ggatgtagga ctcaaacaag
    16261 tccagctcct tttgggaaat gctggcgtac aaaccagatt tgaggagatt gagcaggtct
    16321 tccgcacgga aacgatagcg acgcaagcgc tccaaggact ccacaaagtg gactagggga
    16381 tgatggctca tctcctctgc cttaccaaaa tagtagggaa tatcatattt gtcaaaaatt
    16441 ttgccaatct gcaacttgta gctatccaca tcacccaaga gcaacaagat gtctttatag
    16501 cgagctcctt ggtgtatgtg ttggcgaatt gccgttgcta cctgctccac ctcttctttt
    16561 tggttaacga cttcccatag ctggattttt tcttgatctg ctggagtcaa gtctatcatg
    16621 gtcccgctgt agtcataata ggcttccata ttctttgaaa atttaccaat actgtccaag
    16681 actggctctt gaccaatata agtagcctta gtctggaact gcgctgatag ctgacgtaaa
    16741 aagtcaacgt tggcttgata gacattgcct tccgcataga tgacttgcac agctttcttg
    16801 ctggcatata caccaattag gatttccgac acccgttcat ttaaagcact tactaaagct
    16861 tcttcttctg ccgaaaaacg agaaaatccg tctaccacca gcacaatgtt cttcaactgc
    16921 tcatccaact gaccagtttc taccaagcca gtcaactgtg ctaacttaga ctgatgctca
    16981 aagctttctt tggacaaaat gtctgttaca gccagaaaaa tctttaccaa atcagcctgc
    17041 ttatctggtg agtccatggc ttccaagtcc aaaatagaca tatttgcccg ttgcaattct
    17101 ttgtataaag caactagctg gttaatgaaa ccaaaatctc tctgcaaacg accatagact
    17161 ttcaagtcgc catcttcaaa ttgcgataga acacgaaaga aaatcattgc cagaccaaca
    17221 tcatccagcg gttgacctgc ttctttccta tcaatcatca aatagcgggc caattgccca
    17281 aaacgggtca cgataatatc aaaagttgcc tgttctggca ggtattccaa gaccttgcgt
    17341 tccatctcaa aggatagaga gtttggagca atataaaaaa ctcgcttagc ttccttagca
    17401 aattctgccg aggtatccgt taaatactgc gtcagaggat tgcgaatatc tgtatagact
    17461 aatttcatat caaattctca tgctttcgtt gaatatacta tatctagtat atcaaaataa
    17521 gacaaaaaaa tgggagcgag aaagaactcg accgaataaa aaaagagctc gtctcccacc
    17581 cccacatagc tccaacagtc agagtagtga ctgttggagg ttggaaat
//
LOCUS       DASFQD010000042        17249 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.042, whole genome shotgun sequence.
ACCESSION   DASFQD010000042 DASFQD010000000
VERSION     DASFQD010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 17249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17249
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.042"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            304..585
                     /gene="groES"
                     /locus_tag="U1021_001075"
     CDS             304..585
                     /gene="groES"
                     /locus_tag="U1021_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009730535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEM4711623.1"
                     /translation="MLKPLGDRIVVKIEEKEQTVGGFVLAGASQEKTKEASVLAIGQG
                     IRTLNGDLVAPAVAVGDTVLIDAHAGLEVKDGDQTVHIIREADILAIVE"
     gene            596..2218
                     /gene="groL"
                     /locus_tag="U1021_001076"
     CDS             596..2218
                     /gene="groL"
                     /locus_tag="U1021_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940029.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEM4711624.1"
                     /translation="MAKEIKFAADARESMVRGVDILADTVKVTLGPKGRNVVLEKAYG
                     SPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREG
                     LKNVTAGANPIGIRRGIEAAVATAVEALKAQASPVSNKAEIAQVAAVSSRSEKVGEYI
                     SEAMERVGTDGVITIEESRGMETELDVVEGMQFDRGYLSQYMVTDNEKMVAELENPFI
                     LITDKKISHIQDILPLLESILQTNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKA
                     PGFGDRRKAMLEDIAILTGGTVITEDLGLDLKDATIETLGQAAKVVVDKDGTTIVEGA
                     GNPEAIANRVAVIKSQIEGTTSEFDREKLQERLAKLSGGVAVIKVGAATETELKEMKL
                     RIEDALNATRAAVEEGIVAGGGTALVNVIDSVAKLELKGDDETGRNIVLRALEEPVRQ
                     IAYNAGYEGSVIIDKLKNSELGIGFNAATGEWVNMMDAGIIDPVKVTRSALQNAASVA
                     SLILTTEAVVANKPEPAAPAMPQGMDGMGMGY"
     gene            2449..2862
                     /gene="rpsL"
                     /locus_tag="U1021_001077"
     CDS             2449..2862
                     /gene="rpsL"
                     /locus_tag="U1021_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001142328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEM4711625.1"
                     /translation="MPTINQLVRKPRKSKVEKPKSPALNVGYNSRKKVQTNVSSPQKR
                     GVATRVGTMTPRKPNSALRKFARVRLSNLIEVTAYIPGIGHNLQEHSVVLLRGGRVKD
                     LPGVRYHIVRGALDTAGVNDRKQGRSKYGTKRPKG"
     gene            2879..3349
                     /gene="rpsG"
                     /locus_tag="U1021_001078"
     CDS             2879..3349
                     /gene="rpsG"
                     /locus_tag="U1021_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011285383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEM4711626.1"
                     /translation="MSRKNQAPKREVLPDPLYNSKLVTRLINRVMLDGKRGTAASIVY
                     GAFDQIKEATGNDALEVFETAMENIMPVLEVRARRVGGSNYQVPVEVRPERRTTLGLR
                     WLVTIARNRGEHTMIDRLAKEIMDAANNTGAAVKKREDTHKMAEANRAFAHFRW"
     gene            3891..5972
                     /gene="fusA"
                     /locus_tag="U1021_001079"
     CDS             3891..5972
                     /gene="fusA"
                     /locus_tag="U1021_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEM4711627.1"
                     /translation="MAREFSLEKTRNIGIMAHVDAGKTTTTERILYYTGKIHKIGETH
                     EGASQMDWMEQEQERGITITSAATTAQWNNHRVNIIDTPGHVDFTIEVQRSLRVLDGA
                     VTVLDSQSGVEPQTETVWRQATEYGVPRIVFANKMDKIGADFLYSVSTLHERLQANAH
                     PIQLPIGSEDEFRGIIDLIKMKAEIYTNDLGTDILEEDIPAEYLEQAQEYREKLVEAV
                     AETDEELMMKYLEGEEITNEELKAAIRKATINVEFFPVLCGSAFKNKGVQLMLDAVID
                     YLPSPLDIPAIKGVNPDTDAEEERHASDEEPFAALAFKIMTDPFVGRLTFFRVYSGVL
                     NSGSYVLNTSKGKRERIGRILQMHANSRQEIETVYAGDIAAAVGLKDTTTGDSLTDEK
                     AKIILESIHVPEPVIQLMVEPKSKADQDKMGIALSKLAEEDPTFRVETNVETGETVIS
                     GMGELHLDVLVDRMRREFKVEANVGAPQVSYRETFRASTQARGFFKRQSGGKGQFGDV
                     WIEFTPNEEGKGFEFENAIVGGVVPREFIPAVEKGLVESMANGVLAGYPIVDVKAKLY
                     DGSYHDVDSSETAFKVAASLALKEAAKSAQPTILEPMMLVTITAPEDNLGDVMGHVTA
                     RRGRVDGMEARGNTQIVRAYVPLAEMFGYATVLRSATQGRGTFMMVFDHYEDVPKSVQ
                     DEIIKKNGGNA"
     gene            6961..8952
                     /locus_tag="U1021_001080"
     CDS             6961..8952
                     /locus_tag="U1021_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HEM4711628.1"
                     /translation="MRKKLKFSLVAVACATFLTACGTSNSSAPKAGEATPQTDFHSYI
                     NAQWLKNTKLGAGESQIDNLSQLSEKTQEAIQEMIDQLDMDYSKLQAGSDEKKLIDFY
                     RLAADFDTRNKLGLEPIKPYLEEIKKASTMEELNKILVALYGKNIRNLLHINVTQDIK
                     DSNKNTIYVDPHELSFPKENYDGTDEFSLKNQKAFKAYLQEVFSLSGETSKEASSKAD
                     LLFNLEKEMAAVQRPKEEANNFEAMYNEKTWDEVKALVPNLPIAELVSELGLQSAPTT
                     VVSDPDALKKLNELYQEKNLDALKALLQYRVIAHYNAYLSSNLIEAKAKYDGVATGAV
                     DTPSQKEVAQAAIDANFSDMIGKVYVKHHFSEESKANILSMVQEIKATYAERIKAVQW
                     MSEETKMRALKKLDTLVVKIGYPDQWKDYSQLAIQSKEEGGSLLSNFDMVKTLELREE
                     MGQFGKPFDKSQFGMPSHTVNAYYSPTNNEIVFPAGILQAPLYDPKASPEENLGGIGA
                     VIGHEISHAFDKAGSQFDEKGNLVNWWKPEDLEKFNKKVQQAADIYSKLEVAPGYYVN
                     GEISTGEIMADLGGLTVAIDIAQKKGYDTKKVFESYGKAWREVTTKEFAIANISDEHP
                     PAKYRVNNIVNQIDQFYTDFNVKEGDPMYVKPEDRLRVW"
     gene            9319..10329
                     /gene="gap"
                     /locus_tag="U1021_001081"
     CDS             9319..10329
                     /gene="gap"
                     /locus_tag="U1021_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008090210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEM4711629.1"
                     /translation="MVVKVGINGFGRIGRLAFRRIQNVEGVEVTRINDLTDPVMLAHL
                     LKYDTTQGRFDGTVEVKDGGFEVNGKFVKVSAEREPGNIDWATDGVDIVLEATGFFAS
                     KEKAEQHIHANGAKKVVITAPGGNDVKTVVFNTNHDILDGTETVISGASCTTNCLAPM
                     AKALHDAFGVQKGLMTTIHAYTGDQMVLDGPHRGGDLRRARAAAANIVPNSTGAAKAI
                     GLVIPELNGKLDGAAQRVPVPTGSVTELVATLDKKVTAEEVNAAMKAAATESFGYTED
                     QLVSSDIVGISFGSLFDATQTKVIEVDGEQLVKVVSWYDNEMSYTAQLVRTLEYFAKI
                     AK"
     gene            10479..11678
                     /locus_tag="U1021_001082"
     CDS             10479..11678
                     /locus_tag="U1021_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEM4711630.1"
                     /translation="MAKLTVKDVELKGKKVLVRVDFNVPLKDGVITNDNRITAALPTI
                     KYILEQGGRAILFSHLGRVKEEADKEGKSLAPVAADLAAKLGQDVAFIAGATRGAELE
                     AAINALEDGQVLLVENTRFEDVDGKKESKNDEELGKYWASLGDGIFVNDAFGTAHRSH
                     ASNVGISANVEKAVAGFLLENEIAYIQEAVETPERPFVAILGGSKVSDKIGVIENLLE
                     KADKVLIGGGMTYTFYKAQGIEIGNSLVEEDKLDVAKALLEKANGKLILPVDSKEANA
                     FAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDFQA
                     GTIGVMDAIVKQPGVKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPG
                     LAALTEK"
     gene            12468..12983
                     /locus_tag="U1021_001083"
     CDS             12468..12983
                     /locus_tag="U1021_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HEM4711631.1"
                     /translation="MFKKYTFDPKKFRLGMRTFKSGLAVFLVILLFGYMGWEGIQIAA
                     LTAVFSLREDFDQSVHFGASRILGNSIGGFYALLFFILDRLFLDHFWVTAVFVPIFVM
                     LTIMTNVAMNNKAGIIGGVSALLIITLSIPAGDTIQYVFIRVFETFIGVFIAILVNYD
                     VNVIKKRFQDK"
     gene            13059..13430
                     /locus_tag="U1021_001084"
     CDS             13059..13430
                     /locus_tag="U1021_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM4711632.1"
                     /translation="MREKEFRRSLAIFPIGSVMKLTDLTARQIRYYEDQGLIKPDRNE
                     GNRRLYSLNDMDLLLEIKDFLDEGLNIAAIKKEYANREAKAKVQKQQKTLTDEDVRRI
                     LHDEFSRQGRFSSPSSIFRSS"
     gene            13459..14805
                     /gene="glnA"
                     /locus_tag="U1021_001085"
     CDS             13459..14805
                     /gene="glnA"
                     /locus_tag="U1021_001085"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008808235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEM4711633.1"
                     /translation="MTFTVADIKHDIKEKNVTFLRLMFTDIMGVMKNVEIPATDEQVE
                     KVLSNKVMFDGSSIEGFVRINESDMYLYPDLDTWTIFPWGDENGRVAGLICDIYTTDA
                     KPFAGDPRGNLKKSLRHMEEAGFSSFNLGPEPEFFLFKMDEQGNPTLEVNDKGGYFDL
                     APTDLADNTRREIVNVLTEMGFEVEASHHEVAVGQHEIDFKYADVLKACDNIQIFKLV
                     VKTIARKHGMYATFMAKPKFGIAGSGMHCNMSLFDKDGNNAFFDPEDPRGMQLSQTAY
                     HFLGGLIKHAYNYTAITNPTVNSYKRLVPGFEAPVYIAWAGKNRSPLVRVPASRGMGT
                     RLELRSVDPTANPYLAMAVLLEVGLEGIQNKIEAPAPVESNIYAMSDEERREAGITDL
                     PSTLHNALKALREDEVVRAALGDHIYTNFLEAKKIEWASYATYVSQWEIDNYLDMY"
     gene            complement(15128..16807)
                     /locus_tag="U1021_001086"
     CDS             complement(15128..16807)
                     /locus_tag="U1021_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEM4711634.1"
                     /translation="MSSVNLKPHEVGVFAIGGLGEIGKNTYGIEYKDEILIVDAGIKF
                     PEDDLLGIDYVIPDYSYIVENLDRVKGLVITHGHEDHIGGIPFLLKQANVPIYAGPLA
                     LALIRGKLEEHGLLRDATLHEINHNTELTFKHLKVSFFRTTHSIPEPLGIVVDTPQGK
                     IVCTGDFKFDFTPVGEPADLHRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIM
                     KLIEGIHGRIIFASFASNIFRLQQAADAAVKTGRKIAVFGRSMEKAIVNGIELGYIKV
                     PKDTFIEPNEIKEYPASEIMILCTGSQGEPMAALSRIAHGTHRQVQLQPGDTVIFSSS
                     PIPGNTTGVNKLINILIEAGVDVIHGKINNIHTSGHGGQQEQKLMLRLIKPKYFMPVH
                     GEYRMQKIHASLAVDTGVPKDNIFIMENGDVLALTKDSARLAGQFNAQDIYVDGNRIG
                     EIGAAVLKDRRDLSEDGVVLAVATVDFNSKMILAGPDILSRGFIYMRESGELIRESQR
                     VLFNAIRIAMRNKDANIQTVNGAIVNALRPFLYEKTEREPIIIPMILTPDR"
     gene            complement(16811..17041)
                     /locus_tag="U1021_001087"
     CDS             complement(16811..17041)
                     /locus_tag="U1021_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000639444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-dependent RNA polymerase auxiliary subunit
                     epsilon family protein"
                     /protein_id="HEM4711635.1"
                     /translation="MIYKVFYQESKISPRREQTRALYLDIDAASELEGRIIARELVET
                     NRPEYNIEFIDLLSDNHLEYEKEHADFKITEF"
BASE COUNT         5135 a         3331 c         3962 g         4821 t
ORIGIN      
        1 ctcccccaaa agcctaattt acgttttaaa aaccattctg caaaactttc gtaggctgaa
       61 aatcggcttt caaggtaatc tatttttaaa tctctaaaaa atttcatgaa tactcccaaa
      121 ctttttaaaa atagtataac atagtttcgc tataattaac aggttgtgtt tcctcagtcc
      181 tgcgacggat tttaggtaaa ttaaaaaaga attttcttga ctatttttga ccaagtgata
      241 caataggaaa tgtgaattag tactcgcata caaagagtgc taaaaagacc aggaggtaat
      301 acaatgttga aaccattggg cgatcgtatc gtcgtaaaaa ttgaagaaaa agaacaaaca
      361 gttggtggct ttgtcctagc aggtgcaagt caagaaaaga caaaagaagc aagtgtccta
      421 gcgattggac aagggattcg taccttgaat ggtgacttgg ttgccccagc ggtggcagtt
      481 ggagatactg ttttgattga tgctcacgca ggattggaag ttaaagacgg agaccaaacc
      541 gttcacatca tccgtgaagc agacattttg gcaattgtag aatagaggta ggaaaatggc
      601 aaaagaaatt aaatttgcag cagatgcacg tgaaagcatg gtccgtggtg tcgatatttt
      661 ggcggatact gtcaaagtaa ccttgggtcc aaaaggtcgc aatgttgtct tggaaaaggc
      721 ttatggctca ccacttatta ctaatgatgg tgtaaccatt gctaaagaaa tcgagttgga
      781 agaccatttt gaaaatatgg gtgctaagtt ggtatccgaa gtggcttcaa aaaccaatga
      841 catagctggt gacggtacaa caactgctac tgttttgaca caagcgattg ttcgcgaagg
      901 cttgaaaaac gtgactgcag gtgccaaccc aatcggtatc cgtcgtggta ttgaagccgc
      961 ggttgcgacg gcggttgaag ccttgaaagc acaagcaagt cctgtatcca ataaagctga
     1021 aattgctcaa gtcgcagctg tgtcttcgcg ctctgaaaaa gttggtgagt acatttctga
     1081 ggctatggag cgcgtgggaa cagacggtgt tatcactatt gaagaatctc gcggtatgga
     1141 aactgagttg gatgtggttg aaggtatgca atttgaccgt ggttatctgt cacaatacat
     1201 ggtaacagat aatgaaaaga tggtagctga acttgaaaat ccattcatct tgattaccga
     1261 taagaaaatt tctcatatcc aagacatttt gccactcttg gaaagcattc ttcagaccaa
     1321 ccgtccgctt ttgattattg ctgacgatgt ggatggcgaa gctcttccta cccttgttct
     1381 caacaagatt cgtggtacat tcaacgttgt tgcagtcaaa gctccaggct ttggtgaccg
     1441 tcgtaaagct atgttggaag acattgctat cttgacaggt ggtacagtca ttacagaaga
     1501 ccttggtttg gacttgaaag atgcgaccat tgaaaccctt ggtcaagctg ccaaggttgt
     1561 ggtcgacaag gatggtacaa ctattgttga aggtgctggc aatcctgaag ccattgccaa
     1621 ccgtgtggct gttatcaagt cacaaattga gggaacaact tcagaatttg accgtgaaaa
     1681 attgcaagag cgtttggcaa aattgtctgg cggtgttgct gttatcaaag tcggtgccgc
     1741 tactgagact gagttgaaag aaatgaaact ccgtatcgaa gatgccctca acgcaacacg
     1801 tgccgcagtt gaagaaggaa tcgttgccgg tggtggtaca gcccttgtaa atgttatcga
     1861 tagcgtagcg aaattggagt tgaaaggcga cgatgaaaca ggacgcaata ttgtccttcg
     1921 tgccttggaa gaaccagttc gtcagattgc ctataacgca ggttatgaag gttcagttat
     1981 cattgataaa ttgaagaatt cggaacttgg gattggcttt aatgctgcga caggtgaatg
     2041 ggtgaatatg atggatgcag gtattattga ccctgttaag gtgactcgtt ctgctcttca
     2101 aaatgcagct tccgtagcca gcttgatatt gacaacggaa gcagttgttg ccaataaacc
     2161 agaaccagct gctccagcta tgccacaagg tatggacgga atgggtatgg gctactaaga
     2221 aatagcaaaa tgacacagct acttggctgt gttttttctt aaaaatttca aatatatcta
     2281 tttgacaatg gtcttgggat gtggtactat attagacggt actttttact tttggtctct
     2341 caagagtgta cagggacgtg ctgacaaatg ttgcaaaagt acacacagat aggggttgtc
     2401 accaatgccc tatcaccaaa aataaaaaat atatacagga gaatgtagat gcctacaatt
     2461 aaccagttgg tacgtaaacc acgtaagtct aaagtagaaa aacctaaatc accagctttg
     2521 aacgttggtt acaacagccg taaaaaagtt caaactaacg tttcatcacc acaaaaacgc
     2581 ggtgttgcaa ctcgtgtcgg aacaatgaca cctagaaaac ctaactcagc ccttcgtaaa
     2641 ttcgctcgtg tacgtttgag caaccttatc gaggttactg cttacatccc aggtatcggt
     2701 cacaacttgc aagagcacag cgttgttctt cttcgtggtg gacgtgtaaa agaccttcca
     2761 ggggtacgtt accatatcgt tcgtggtgca cttgatactg caggtgttaa cgatcgtaag
     2821 caaggccgtt ctaaatacgg tactaaacgt ccaaaaggct aagaaagggg aaatataaat
     2881 gagtcgtaaa aatcaagcgc ctaagcgcga agtattgcca gatccattgt ataactcaaa
     2941 attggtaact cgtttgatca accgtgttat gttggacggt aaacgtggta ctgctgcatc
     3001 aatcgtttac ggtgcctttg atcaaatcaa agaagcaact ggtaacgatg cacttgaagt
     3061 atttgaaaca gcaatggaaa acatcatgcc tgtacttgaa gtacgtgcac gtcgtgtcgg
     3121 tggttctaac taccaagtcc cagttgaagt tcgtccagag cgtcgtacaa cacttggtct
     3181 tcgttggttg gtaacaatcg ctcgtaaccg tggtgagcac actatgatcg atcgccttgc
     3241 gaaagaaatc atggatgcag caaacaacac tggtgcagct gttaagaaac gtgaagatac
     3301 tcacaaaatg gcagaagcaa accgcgcatt cgcacacttc cgctggtaag ataggatgtg
     3361 aggacgttaa gaaaattcaa ggaaaaatag gaaatcagac gatggacctc aaggtccaag
     3421 gaagatttac acctaaaggt agccacactt gtaattggct aaagccaaaa caattgcgtc
     3481 tcttttttcc agaattttta gtccgaactc aactaagatt aagatacgag ggcgtcaagc
     3541 aactcctaga caaaataggg aagcgaagca gattgctgtg caatcaatga ggttctcacc
     3601 taaaggtagc cccatttgta attggctaaa gccaaaacaa ctgcgtctct ttttgtcagt
     3661 gagttgtagc tcgagttcaa ttaggatgtg aggacgttaa gtcagttcta cataaatcaa
     3721 ttgagattat ggtagaaact tatcgttcaa ccatcacaaa ccggattgag gatgacctca
     3781 tccacttcac accattagta agaaatcaag cgggtgggac ttgcccactc gcttttctta
     3841 aaatatggta taataaagta taaaactaaa attataggag aacaaacctc atggcacgcg
     3901 aattttcatt agaaaaaact cgtaatatcg gtatcatggc gcacgttgac gcgggtaaaa
     3961 caacgacaac tgagcgtatt ctttactaca ctggtaaaat ccacaaaatc ggtgaaactc
     4021 acgaaggtgc atcacaaatg gactggatgg agcaagagca agagcgtggt atcactatca
     4081 catctgctgc gacaacagct caatggaaca accaccgtgt aaacatcatc gacacaccag
     4141 gacacgtgga cttcacaatc gaagtacaac gttcacttcg cgttcttgat ggtgcggtaa
     4201 ccgttcttga ctcacaatca ggtgttgagc cacaaactga aacagtatgg cgtcaagcaa
     4261 ctgaatacgg tgttccacgt atcgtatttg ctaacaagat ggataaaatc ggtgctgact
     4321 tcctttactc agtaagcaca cttcatgagc gtcttcaagc aaatgcacac ccaattcaat
     4381 tgccaatcgg ttctgaagac gagttccgtg gtatcatcga cttaatcaag atgaaagctg
     4441 aaatctatac taacgacctt ggtacagata ttcttgaaga agatattcca gctgaatacc
     4501 ttgagcaagc tcaagaatac cgtgaaaaat tggttgaagc agttgctgaa actgatgaag
     4561 aattgatgat gaaatacctt gaaggtgaag aaatcacaaa cgaagaattg aaagccgcta
     4621 tccgtaaagc aactatcaat gttgaattct tcccagtatt gtgtggttca gccttcaaaa
     4681 acaaaggtgt tcagttgatg cttgatgcag ttatcgacta ccttccaagc ccacttgaca
     4741 tccctgctat taaaggtgtt aacccagata cagatgctga agaagagcgt catgcatcag
     4801 atgaggagcc atttgcagct cttgccttca agatcatgac tgacccattc gtaggtcgtt
     4861 tgacattctt ccgtgtctac tcaggtgtcc ttaacagcgg ctcatacgta ttgaacactt
     4921 ctaaaggtaa acgtgagcgt atcggacgta tccttcaaat gcacgcaaac agccgtcaag
     4981 aaattgaaac tgtttatgca ggtgacatcg ccgctgcggt tggtttgaaa gatactacaa
     5041 ctggtgactc attgacagat gaaaaagcaa aaatcatcct tgagtcaatc cacgttccag
     5101 aaccagttat ccaattgatg gttgagccta agtctaaagc tgaccaagac aagatgggta
     5161 ttgccctttc taaattggct gaagaagatc caacattccg cgttgaaaca aacgttgaaa
     5221 ctggtgaaac agttatctct ggtatgggtg agttgcactt ggatgtcctt gttgaccgta
     5281 tgcgtcgtga attcaaggtt gaagcaaacg taggtgctcc tcaagtatca taccgtgaaa
     5341 cattccgtgc ttctacacaa gctcgtggtt tcttcaaacg ccagtctggt ggtaaaggtc
     5401 aattcggtga cgtttggatc gaattcacac caaacgaaga aggtaaaggt ttcgagttcg
     5461 agaacgctat cgtcggtggt gtggttccac gtgaattcat cccagcggtt gaaaaaggtc
     5521 tcgtagaatc tatggcgaac ggtgttcttg ctggttaccc aatcgttgac gttaaagcta
     5581 agctttacga tggttcatac cacgatgtcg actcatctga aacagccttc aaagtggcag
     5641 catctcttgc ccttaaagaa gcagctaaat cagctcaacc aactatcctt gagccaatga
     5701 tgcttgtaac aatcactgca ccagaagata accttggtga cgttatgggt cacgttactg
     5761 cacgtcgtgg tcgcgttgat ggtatggaag ctcgtggtaa cacacaaatc gttcgtgctt
     5821 atgtgccact tgcggaaatg ttcggttacg caactgttct tcgttcagca acacaaggtc
     5881 gcggtacttt catgatggta tttgaccact acgaagatgt accaaaatct gtacaagatg
     5941 aaatcattaa gaaaaacggt ggcaatgcat aattgtctat ctacacctac cttcgggtag
     6001 gtgttttttt ggtacgacgg atatgtcaca catctgagcg tgatactcat actcttcgaa
     6061 aatcaaaatt atccgttgtc aacttgcctt gatgaactcc agttctatct tcggcttcgt
     6121 ttcctaggct acttttgatt ttcattgagt atcagtagtt tatctttgat tgcttcgacg
     6181 agcgaggaaa cttcgtttcc ttatttccaa cttcaaacac ttcactggag tatttgaact
     6241 cgctttgtcg tactttacag aagtgatttg cgaggcaagt cttatttcca acctagaaca
     6301 gcctttaggc tgttctagca acttgcagct attgagacga acttgcttcg ccctatctcc
     6361 agccttcaaa ggtttcccga acctttgaag cgagtactaa aaacaaacta aacgactaca
     6421 ctatataaaa cagatatccg ccagattcat tttggaaata tacaatgaga aagctacaat
     6481 ttataaaaaa ttaccctaat ttaggtgtgg atggctaaca aaagatcagg gtttgctatt
     6541 ttgggatttc attgggtata agttcctgtt gtcgatgaac tcaacagtga ctcccaggtc
     6601 cgactactgt gaaataaacg gattaaaaca gtctggggtt agactatttc agctcaacaa
     6661 ctagaaatta ggaattgttg ccgaactctt ttgatcgttc gagttctcgc ctactcacac
     6721 ttaatcagct aaaataaatg ttttaaatta tttagaatta ctttgtttgg gaatggttat
     6781 aaaaaataag agaattaata gataggctac agaagaaaag cagatataaa tgttagaatc
     6841 cttataaggt agatcgatga aagagtagtt taggaccgct aattactaaa ggaggatgct
     6901 tgtatggtga tgaaatagtg gtactaagca cattaacaat aaaaagaaag gacagaaacc
     6961 atgagaaaaa aactaaaatt ttcattagta gcagtcgcct gtgcgacatt tttgacagcc
     7021 tgtggcacaa gtaattcctc ggctcccaaa gcaggtgaag caacaccaca gacggatttt
     7081 cattcttata tcaatgcgca atggttgaaa aatacaaaat taggtgccgg tgaatcgcaa
     7141 atagataatc tgagtcaact ctctgagaaa acgcaagaag cgatacagga gatgattgac
     7201 cagctggata tggactattc caagctgcaa gctggtagtg atgagaaaaa acttattgat
     7261 ttttaccgat tggcagccga ttttgatact cgcaacaaat tggggttaga gcctattaag
     7321 ccttatctag aggagattaa aaaagcctct accatggaag aactcaacaa gattctggtg
     7381 gccctatacg gcaaaaacat ccgcaatttg cttcatataa acgttactca agatataaaa
     7441 gacagtaaca aaaacaccat ctacgttgac cctcacgagt taagttttcc aaaagaaaat
     7501 tatgatggca cagatgaatt ttcattgaaa aatcaaaaag cctttaaagc ctatctgcag
     7561 gaagtgttta gcttgtcagg agaaacctca aaagaagcct cttctaaggc agatctcctc
     7621 tttaatttgg aaaaagagat ggctgcagtg caacggccaa aagaagaagc caataacttt
     7681 gaagccatgt ataacgagaa gacttgggat gaggtcaaag cactggttcc caacctaccg
     7741 attgctgagt tggtttctga gttaggactt cagagtgccc caacgacagt cgtatcagat
     7801 ccagatgctc taaaaaaatt aaatgaactc tatcaagaaa agaatttaga cgctcttaag
     7861 gctctgctcc aatatcgtgt gattgcccat tacaatgctt atctgtcaag caatttaatc
     7921 gaggcaaaag cgaaatatga cggcgtagca accggtgcgg tagatactcc gagtcagaaa
     7981 gaagttgctc aagcggccat tgatgcaaat ttctccgata tgattggcaa agtttacgtt
     8041 aaacaccatt tttcagaaga atccaaggct aatatcctat ctatggttca ggagattaaa
     8101 gcgacttatg cagagcgaat caaagcagtg cagtggatgt ctgaagaaac taagatgcgg
     8161 gccttgaaaa aactagatac attggttgtt aaaatcggct atccagacca gtggaaggat
     8221 tactcacaac ttgctatcca atccaaggaa gaagggggga gtcttctttc taacttcgat
     8281 atggtaaaaa cacttgaatt gcgtgaagag atggggcaat ttggcaagcc ttttgataag
     8341 tcgcagttcg gcatgccttc tcacacggtg aatgcctatt acagcccaac taacaacgaa
     8401 attgtctttc cagcggggat tttacaggct cctctctacg atccaaaagc tagtcccgaa
     8461 gaaaatctag gtggaatcgg ggctgttatc ggtcatgaaa tttcccatgc ctttgataag
     8521 gctggttctc aatttgatga aaaggggaac cttgtcaact ggtggaaacc agaagacctt
     8581 gaaaaattta ataaaaaggt tcaacaggca gcagatatct actctaaatt ggaagtggct
     8641 ccgggctact atgtcaatgg cgaaatttca accggtgaaa tcatggcgga tctcggtggt
     8701 ttaacggttg ccattgatat tgctcagaaa aaaggctacg atacgaagaa agtcttcgag
     8761 tcttatggca aagcatggcg tgaagtcacc accaaagaat ttgctattgc caacatcagc
     8821 gacgaacatc caccagctaa atatcgggtt aacaacattg tcaaccaaat tgatcaattc
     8881 tatacagact tcaatgtcaa agaaggggat ccaatgtatg tgaaaccaga agaccgccta
     8941 cgagtgtggt aaaagattat agaggtgtct gcggtccaaa atgggcggta gacacctttt
     9001 taggtaaaaa atagaagtag cggtaaacca agaatcggta aaaaatgtgt cgaggtatgg
     9061 caatgctatt aagttaagta tttaaccagt cataaccacc cgagaaaacg catggctatg
     9121 atttttaact tttatttttt ggccttctat tttttacata agatgaaccg gtaagcagtt
     9181 gcaattttcg gtaaatagtt atataataaa aacgttgaaa agatgcttgt aggcttacaa
     9241 gttaatattt tcacaaaagg attaaaaggc ttgcctttta aaataaagaa ctcgattttc
     9301 ataaggagga aatcattcat ggtagttaaa gttggtatta acggtttcgg acgtatcggt
     9361 cgtcttgctt tccgtcgtat ccaaaacgta gaaggtgttg aagttactcg tatcaacgac
     9421 cttacagatc cagtaatgct tgcacacttg ttgaaatatg acacaactca aggtcgtttc
     9481 gacggtactg ttgaagttaa agacggtggt ttcgaagtta acggtaaatt cgttaaagtt
     9541 tctgctgagc gcgagccagg aaacatcgac tgggctactg atggcgtaga tatcgttttg
     9601 gaagctacag gtttctttgc ttctaaagaa aaagctgagc aacacatcca cgctaacggt
     9661 gctaaaaaag ttgttatcac tgctcctggt ggtaacgatg ttaagactgt tgttttcaac
     9721 actaaccacg acatccttga tggtactgaa acagttatct caggtgcttc atgtactaca
     9781 aactgtttgg caccaatggc taaagctctt cacgatgcat ttggcgttca aaaaggtttg
     9841 atgactacaa tccacgctta cactggtgac caaatggttc ttgacggacc acaccgtggt
     9901 ggtgaccttc gtcgtgcacg tgctgctgct gcaaacatcg ttcctaactc aactggtgct
     9961 gctaaagcta tcggcttggt aatcccagaa ttgaacggta aacttgacgg tgctgcacaa
    10021 cgtgttccag ttccaacagg ttctgtaact gaattggttg caactcttga caagaaagta
    10081 actgctgaag aagtaaacgc tgctatgaaa gctgctgcta ctgaatcatt tggttacact
    10141 gaagaccaac tcgtatcttc agatatcgta ggtatctcat tcggttcatt gtttgatgca
    10201 actcaaacta aagttatcga agttgatggc gagcaattgg ttaaagttgt ttcatggtac
    10261 gacaacgaaa tgtcttacac tgcacaactt gttcgtactc ttgagtactt cgcaaaaatc
    10321 gctaaataat ccttagtgaa aatcgaagag gcttcggcct cttttttcta ttattcgttc
    10381 tttttgtaga tttgtgaaaa aaatatcttt atgcaagaaa aaatacagaa aatatgatac
    10441 aatggtaaag taaatataat ttaaggagtt cttatctaat ggcaaaattg actgttaaag
    10501 atgtagaatt gaaaggcaaa aaagttcttg ttcgtgtgga cttcaacgtg cctttgaaag
    10561 atggcgttat cactaacgat aaccgtatta cagcagctct tccaactatc aagtatattc
    10621 ttgagcaagg tggacgtgca attcttttct ctcaccttgg tcgtgtgaaa gaagaagctg
    10681 acaaagaagg taaatcattg gctcctgtag cagctgactt ggcagctaaa ttgggtcaag
    10741 acgttgcttt catcgcaggt gctactcgtg gtgctgaatt agaagcagct atcaatgctt
    10801 tggaagatgg acaagttctc cttgttgaaa acactcgttt cgaagatgtt gatggtaaga
    10861 aagaatctaa aaacgacgaa gaacttggta aatactgggc ttcacttggt gatggtatct
    10921 tcgttaacga tgcatttggt actgcacacc gttcacacgc atcaaacgtt ggtatctcag
    10981 caaacgtaga aaaagcagta gctggtttcc ttttggaaaa cgaaattgct tacatccaag
    11041 aagctgttga aactccagag cgcccattcg tggcaatcct tggcggttca aaagtatctg
    11101 ataagatcgg tgttatcgag aaccttcttg aaaaagctga caaagttctt atcggtggtg
    11161 gtatgactta cacattctac aaagctcaag gtatcgaaat cggtaactca cttgtagaag
    11221 aagacaagct tgatgtggca aaagcacttc ttgaaaaagc taacggtaaa ctgatcttgc
    11281 cagttgattc aaaagaagct aacgcatttg ctggatacac tgaagttcgc gatacagaag
    11341 gcgaagcagt ttcagaaggc ttccttggtc ttgacatcgg tcctaagtca atcgctaagt
    11401 ttgacgaagc gttgactggt gccaaaacag ttgtttggaa cggtcctatg ggtgtatttg
    11461 aaaacccaga cttccaagct ggtacaatcg gtgtaatgga cgctatcgtg aaacaaccag
    11521 gcgtgaaatc aatcatcggt ggtggtgact cagcagcagc agctatcaac cttggccgtg
    11581 cagacaagtt ctcatggatc tcaactggtg gtggtgcatc aatggaactc ctcgaaggga
    11641 aagtgcttcc aggacttgca gctttgactg aaaaataggc ggtaagtcag gaatctatga
    11701 ttccgtagac gcacccccgc aaggctgaat aggttggtca caagcgtagc aaagtgaact
    11761 gccattcagc tactgcgtat gaaagatgaa cgatgaaaag agttgggcaa ccagctcttt
    11821 tctagtgcaa aggctagatt ttctgtgaac gtagtgagtt tagaaaatca gcctaggtaa
    11881 aggctaaaat gcaacggatt tccgttgcat tttgtacatc gcgtagagtt tctacgaagc
    11941 taagcgaaac aagatgtact tccaggactt gcgacggcac ggagtgccta gtgccatgcc
    12001 tagtctttct gggaagtgtg acttagaaag actggctagg tgctgccttg actgagaaat
    12061 aggcggtgag tcagttcaac atatctggga gatatgttga ggttagaaat agaagaagcg
    12121 aagcttctgt caaaaatgat tccgtagatt gttactttga tttttcttgg tgacaacttc
    12181 aaatagtcca ctgtgctatt tgaaccccgc aaggctgaat cttggtcaca gctcccattc
    12241 agctactgcg caaaaaatat aaatgtaaaa aagacgttgt ttttttgcag cgtctatttg
    12301 tttgtcttac ttctgggttc cttcttgcag ctgatttaaa gtggcagatt attggttttt
    12361 cgaaaagctg gcgtgaacag gaggcttttc cagtcgagct taggagaaaa gaaaagctgg
    12421 gcaggtattt gctattctat tttccgaaat catgttagaa tagaggtatg tttaaaaaat
    12481 atacatttga tccaaagaaa tttcggttgg ggatgcggac gttcaaatcg ggtttggcag
    12541 tctttctagt tattctactc tttggctata tgggctggga agggattcag attgcggctt
    12601 tgacggctgt gtttagttta cgagaagact tcgatcagag tgtccatttt ggagcttctc
    12661 gtattctggg taattctatt ggtggttttt atgcgctact tttctttatt ttggataggt
    12721 tattcttaga tcatttttgg gtaactgcgg tttttgttcc gatatttgtc atgttaacga
    12781 ttatgacaaa tgtggcgatg aataataaag cgggaattat tggtggagtg tcagctttat
    12841 taattattac attgtctatt cctgctggtg atacaatcca atatgtgttt attcgtgtgt
    12901 ttgaaacctt tatcggagtt ttcattgcga ttctagttaa ttatgatgtg aatgttataa
    12961 aaaaacgttt tcaggataaa taatgttata aaatataaca tcgcctattg acctcaaaaa
    13021 aaaattctcc tataatggta ggcagaaagg agttcgttat gagagaaaaa gagtttcgtc
    13081 gttccttagc catctttccg atcggtagtg tgatgaagtt gacagattta actgctcgtc
    13141 aaattcgtta ctatgaagat caaggcttga ttaagcccga tcgcaatgaa gggaatcgtc
    13201 gcttgtattc tctaaacgat atggacttac ttttagaaat caaggatttt ttggatgaag
    13261 gcttgaatat tgctgcgatt aagaaggaat atgcaaatcg ggaagcgaaa gctaaggtcc
    13321 aaaaacagca gaaaaccttg actgatgaag atgtccgtcg tatcttacat gatgaattca
    13381 gtcgtcaggg acgattttca agtcctagtt ccattttccg ttcgtcgtaa ttagctttta
    13441 aaatagagga gaaaaataat gacattcaca gtggcagata tcaagcacga tatcaaagag
    13501 aaaaacgtta ccttcctacg tcttatgttt acggacatca tgggagtgat gaaaaacgta
    13561 gaaattccag caactgatga gcaggtcgaa aaggttttgt caaataaggt catgtttgat
    13621 ggttcatcta ttgaaggatt tgttcgtatc aatgaatcag atatgtatct ttacccagac
    13681 ttggatacat ggactatctt cccttggggt gatgaaaatg gccgtgtagc tggcttgatt
    13741 tgtgatattt atacaacaga tgctaagcct tttgctggtg acccacgtgg aaatttgaag
    13801 aaatcgcttc gtcatatgga agaggcaggt ttctcttcat tcaaccttgg tccagaacca
    13861 gaattcttcc tctttaagat ggatgaacaa ggaaatccaa cgcttgaagt aaatgataaa
    13921 ggtggttatt ttgacctcgc accaacggac ttggctgata atacacgtcg cgaaattgtc
    13981 aatgtcttga cagagatggg ctttgaagtt gaagcgagcc atcacgaagt ggcagtaggt
    14041 cagcatgaaa ttgacttcaa atatgcggac gtcttaaaag cttgcgacaa tattcaaatc
    14101 ttcaagttag ttgttaaaac aattgctcgt aagcatggta tgtatgcgac atttatggcc
    14161 aagcctaagt ttggtattgc tggctcaggt atgcactgta acatgtccct ctttgacaag
    14221 gatggaaaca atgccttctt tgatccagag gatcctcgcg gtatgcagct gtctcaaact
    14281 gcttaccatt tccttggtgg tttgattaag catgcttata actatactgc tattacaaac
    14341 ccgacagtga actcttacaa gcgtttggtt ccaggctttg aagctcctgt gtatattgct
    14401 tgggctggta aaaaccgctc accattggtt cgcgtacctg catcacgtgg aatgggaact
    14461 cgtttggaat tgcgctcggt tgatccaact gccaacccat acttagctat ggcagttcta
    14521 ttggaagttg gcttggaagg tattcaaaat aaaattgaag caccagcacc agtagaatct
    14581 aatatctatg caatgtctga tgaggagcgt cgtgaagcag gtatcactga tcttccttca
    14641 actcttcaca atgcattgaa agctcttcgt gaagacgagg tagttcgtgc agctctaggt
    14701 gatcatatct atacgaattt cttggaagct aagaaaatcg aatgggcaag ctacgcaacc
    14761 tacgtttctc aatgggaaat cgacaactat ttggatatgt attaaacaaa ggaccccgac
    14821 gggtcctttg ttcatgagct tgaaaatcag agagcgagta atggcgcttg gaccattttt
    14881 tcatgagctt gaaaaccaga tagcgaattg ggaccccgac gggtcctttg ttcacgagcc
    14941 gagaaattgg aaagcgtgta atggtccagt ggagtgaaat agtctgggaa gagactgttt
    15001 cagtctgagc taataaatag cagggcgagg ggatggacat gagcttgaaa tctgtctttt
    15061 tacaagctgg gttatcttgt taatataaaa taaatcccag aggtctcacc tctgggattt
    15121 tagtgtgtta tcggtcaggc gtcagaatca ttgggataat gattggttca cgctctgttt
    15181 tttcgtatag gaatggtcgt agggcgttaa caatggcgcc gttgactgtt tggatattgg
    15241 catctttatt gcgcatggcg atgcggatag cgttgaaaag gacgcgttgg ctttcgcgaa
    15301 tgagctcgcc agattctctc atatagatga agccacggct gaggatgtct ggtcctgcta
    15361 atatcatctt agaattaaaa tcgacagtgg ctactgcaag gacaacacca tcttctgaaa
    15421 gatcgcggcg gtctttgagg acagctgcgc cgatttcacc gatgcggttt ccatcaacat
    15481 agatgtcttg ggcgttgaat tgaccagcga gacgtgcaga atcttttgtc agagcaagga
    15541 catctccgtt ttccatgatg aagatattat ctttgggaac gcctgtatca acagctaggc
    15601 tggcatggat tttttgcatg cggtattcac catggacagg catgaagtat tttggtttga
    15661 tcaagcggag catgagtttt tgctcttgtt gaccaccgtg cccagaggta tggatgttgt
    15721 taatcttgcc gtgaatcaca tcgacaccgg cttcaatcaa gatattgatg agcttgttga
    15781 cacctgtggt atttcccgga ataggactgg acgagaagat aaccgtgtcg cctggctgga
    15841 gttgcacctg acggtgggta ccgtgggcga tgcgagagag tgctgccata ggctcaccct
    15901 ggctacctgt acagagaatc ataatttcgc tggcagggta ttctttgatc tcgtttggct
    15961 cgatgaaggt atccttaggc accttgatgt agccgagttc gataccgtta acaatggctt
    16021 tttccatgga gcgtccaaaa acagctatct tgcgtccggt cttaaccgct gcatcagccg
    16081 cctgttggag acggaagatg ttggaggcaa aggaagcaaa gatgatacgt ccatggatgc
    16141 cttcaatcag cttcataatg gactgaccga ccactttttc cgagttggtg aaggttggga
    16201 cttcagcatt tgtcgagtcg gagaggaggc agagaacgcc ttcttcaccg agggcagcca
    16261 tgcggtgaag gtctgctggc tcgccaactg gagtgaagtc gaacttgaag tcaccggtac
    16321 agacgatttt tccttgcggg gtgtcaacga cgataccaag tggttctgga atggagtggg
    16381 tggtgcggaa gaagctgacc ttgaggtgct tgaaggtcaa ctcagtattg tggttgattt
    16441 catgcaaagt cgcatcacgg agcagaccgt gttcttccaa tttgcctcga ataagggcga
    16501 gggctaaagg tccagcatag attgggacat tggcctgctt gagtaagaag ggaatgcctc
    16561 cgatgtggtc ttcgtgcccg tgggtaataa ccagaccttt aacgcggtct aggttttcaa
    16621 cgatgtagga gtagtctggg ataacgtagt cgatacccaa taggtcatct tctgggaact
    16681 tgataccggc atcgacgatg agaatttcat ccttatactc gataccgtag gtatttttcc
    16741 cgatttctcc caaaccaccg atggcgaaaa cgccaacttc atgaggtttt agattgactg
    16801 atgacatgga ttaaaactcc gtaattttga aatctgcgtg ctctttctcg tattcaagat
    16861 gattgtctga taagaggtcg ataaattcga tattgtattc agggcggttg gtttccacca
    16921 attcacgcgc aataatacga ccttccaatt ctgatgcagc atcgatgtct agataaagag
    16981 cacgtgtttg ctcgcgacgt gggctaattt ttgattcttg atagaatact ttataaatca
    17041 tgtgtagtat agttcctttc tttttgactg gcaactatga aaaaagcccc aaacagttgg
    17101 ggctgtctgg taatgcctat tcaattttct cgagttgtca atttattcag tctaaatgta
    17161 ctcttcatta taccataaaa tatgctgatg gtaaaagggt ttggtaggaa aatggaaaag
    17221 tgtcatgatt ttcagaaatt cggtatttc
//
LOCUS       DASFQD010000043        17012 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.043, whole genome shotgun sequence.
ACCESSION   DASFQD010000043 DASFQD010000000
VERSION     DASFQD010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 17012)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17012)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17012
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.043"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..674
                     /locus_tag="U1021_001088"
     CDS             <1..674
                     /locus_tag="U1021_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HEM4711636.1"
                     /translation="ESEIVSDLKQFRKLAKNCLMQRDYEALGFLYEREKGTLSHLNFP
                     DQVYLEWVEAVLAENLEARREDAIQKLRELLERVGENRRGYLYLYNSLLILLIRDEKN
                     AEAEQFYSEVIEKIDKNKLDLLVDIDAYFSIQSNYIRYLWLTNQLEKGIELVTACIEE
                     FKSIYPIHFLADFYCDLGNVTEDFADKQLVKKRYELSRLLYELAGIDAIALKIEKYLK
                     ETYTD"
     gene            946..3165
                     /locus_tag="U1021_001089"
     CDS             946..3165
                     /locus_tag="U1021_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HEM4711637.1"
                     /translation="MFKKYACTLQHDQSDCAAAVVSTVLLTYKKELSIMKIREIIGTD
                     MYGTTVHGIVSGLEKLNFTVKAVRVSLDDLTGDISFPAILQIRNSLGQNHFIVIHKIK
                     KDGNYLVADPAKGLDMLSITELEEVYQGIAIFMVPNSEFEKGNMKGKGLFDLFSALIL
                     TQKGLVGTIILASFLLSIVGILSSLFSKVIMDEIIPFGLKNSLYLFLIVFGIVSLVQS
                     LLSAFRQHILLFLSRKIDIPVLLGYYDHIIHLPYSFFGSRRVGDVLTRFQDAMTIKNV
                     FTSVSISLVMDISLSLISAFVLWHLNPTLFLILVMIVIVNIVLIYCFKKPYKKINNEQ
                     MEANSMLNSQLIESIRNIDTIKSQHDERQRLDKLEENFVHTLEIGYKEGFLQNIQSTI
                     SSIAGTLGNLIFMGVGALFIIDNKMTIGDLLVFQTLSQYFTEPVQNLVGLQLTFQEVQ
                     VAVSRLQELMDVEREDSQVGNSIHNFSLLEDIVFKNVSFAYGSRPPIIRDFSLIIKQG
                     EKIAFVGESGAGKSTLVRLLLHFIQPIEGQIKFGEYDLGDLDYGELRKRIAYIPQIVE
                     LFSGTIIDNLKIGNPEASYEDMIRVCRIVGIHDTIQKLQNRYGSFVEEGGQNFSGGEK
                     QRLAIARALLSKADLYIFDEATSNLDSFSEQIIQNLIFEKIIGKTTVVVAHRLSTILR
                     CDKICFLEDGKIAEYGTHDELMKLGGRYATMVGLQSIQLDKQEKTVATSWSEEVVYE"
     gene            3158..3625
                     /locus_tag="U1021_001090"
     CDS             3158..3625
                     /locus_tag="U1021_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM4711638.1"
                     /translation="MSKLEVLENKKLVLKKVICKKLSSLQFEDLEQEIDKFYQHLQLL
                     KVQMFGPLIVKNSGTILHEDGTITVDYDLYVQAHDFRQYDKFYTVYEEIVCPHCVYVR
                     FEDSPEYLQYAYSKLDLHFYENDLETNGIIYTVYVNTNNETMTVDIFRPIISL"
     gene            3622..5025
                     /locus_tag="U1021_001091"
     CDS             3622..5025
                     /locus_tag="U1021_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001865356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEM4711639.1"
                     /translation="MKLYNKSELRYSRIFFDKRPPAYAFILIFSTLATLIIAFAVSAY
                     LPKNYIVKARGTSVITGTEYVSALSNGKIVTLHKKEGDSVKAGEVILSLSSGQEGLQT
                     ESLTKQLDKLKAKESLFQKYEQSLNEKVNYMANSGEEQEYYGKVEYYLSQLSSENYND
                     GSQYAKLQEEYTKLNKLVAEKSQLETDLSSYQSQLANLEAELATLSVQETAETNSDSE
                     TNSSSTDSSPNSIQLEQLNTKISEVKTKIETITSSIQGKGTEIESLQSSIREMERSYN
                     DPTSQAYNTYAQLISELGTARAANNKSITELEANLGISTGQDRGLTVSASSDGTLHYV
                     TPLKQGMSVQQNQTVAEIAGSDREAYIEAFVLATDISRVTVGAEVDIAITGVNSQKFG
                     TLKGAVTQIDSGTITQETQNGNVSLYKVVVALEELTLQKDEEIVVLQKDMPVEARIVY
                     DNETYLDWILELLSFKQ"
     gene            5155..5460
                     /locus_tag="U1021_001092"
     CDS             5155..5460
                     /locus_tag="U1021_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000424403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711640.1"
                     /translation="MELVLPNNYVALEQEEIMYLDGEGWIADSFAVGGGVIKGFVWAV
                     QTASYASALGTVALPIVGTVSVGTLGAISGAVTGYITGYKTGRWLGRWIETNILGWK"
     gene            5863..6207
                     /locus_tag="U1021_001093"
     CDS             5863..6207
                     /locus_tag="U1021_001093"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711641.1"
                     /translation="MELVMPNNYVVLEEEEMMYLDGGWSASVLGNNLWGAAKKFAVVF
                     SVVNAMAKSLGYVNAGALAALKGSFSFIVGKISWAIGKFVGIIGGFWTGFLAGFSAGA
                     ALTYLGNNRVFY"
     gene            6209..6460
                     /locus_tag="U1021_001094"
     CDS             6209..6460
                     /locus_tag="U1021_001094"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711642.1"
                     /translation="MNTLYIFVALSLNVVVLNQLYLLYKKKEELNATVAFLVCLLVTV
                     LPSAQDFHGLLGLITGALVIVYLGSFVYSRLAPKKRTAK"
     gene            complement(6515..7378)
                     /locus_tag="U1021_001095"
     CDS             complement(6515..7378)
                     /locus_tag="U1021_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEM4711643.1"
                     /translation="MKIDIRIPQAFPQLTVKEVLEDYFLIPRKIRHFLRTKKHVRVNG
                     ELINWQSPIAAGDLLELTFDQEDYPEKSIPLGQADLVEELYQDEHLIIVNKPEGMKTH
                     GNEPTEIALLNHVSAYVGQTCYVVHRLDMETSGAILFAKNPFILPILNRLLEDKVIYR
                     DYLALCQGQLKKTHWTITDKIGRDRHDRRKRVVDNRKGQAALTQVRRLKTLGKNSLVS
                     CRLQTGRTHQIRVHLSHHGHALVGDPLYSRVAAPRLMLHAQKLSLTHPLTLEEISVEA
                     RSESFEKVLRK"
     gene            complement(7380..8348)
                     /locus_tag="U1021_001096"
     CDS             complement(7380..8348)
                     /locus_tag="U1021_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000081018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM4711644.1"
                     /translation="MTQVYDITIIGGGPVGLFAAFYAHLRQAKVKIIDSLPQLGGQPA
                     ILYPEKAILDIPAFPSLTGQELTDNLLAQLAPFDTTICLNETLTAIKPGETITLTTNK
                     GCHQTKTLIIAMGGGAFKPRPLEIDGADSFDNVHYHVSNIQQYADKDIVVLGGGDSAV
                     DWSLAFEKIAKTTHIVHRRDNFRALEHSVEELKQSSVTIHTPFIPKGLSGENGRASAI
                     DFDKVKSEDKLTLSFDHLFVNYGFKSSIGTLKEWGLELNRHRITVNSKQETSVPGIYA
                     IGDCCFYEGKIDLIATGLGEAPTAVNNAMNYLNPNEKVQPKHSTSL"
     gene            8501..10714
                     /locus_tag="U1021_001097"
     CDS             8501..10714
                     /locus_tag="U1021_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HEM4711645.1"
                     /translation="MDDLQYQPIEVPEDFQIDHEDRPSRRRRGNRGSVDKPKKKSRIP
                     EPIRKFWRRYQLTKILIILMVLTVLTVGGYLFFLAKTANVGDLQQALKATTIIYDKDG
                     AEAGTLSGQKGTYVELDAVSDNLENAVIATEDRSFYKNSGINYQRTILAALTLGRSGG
                     GSTITQQLAKNAFLTQDQTISRKAREFFLALEINKKYSKQEILTMYLNNAYFGNGVWG
                     VEDASQKYFGIPASDLTLEQAAVIAGMLKGPEIYNPYYSLENAVNRRDTVLQNMVNAG
                     YIDQATADAGFQVDLASQLSDTYTGKQSNYSYPSYFDAVIAEAIERYGLKESDIINNG
                     YRIYTEMDQNSQASMQVIFNDETMFPTSSFDGTHAQAASVALDPRTGGVRALVGRVNS
                     SEDAVFRTFNFATQAKRSPGSTIKPLVAYAPAVAAGWSIDMALDNHTETYGDYTLHNY
                     DYSTSDTIPMYQALALSYNLPVAYIVNTLGIDKAFEYGQKFGLDMENVEKVLGVSIGS
                     GVETNPLQMAQAYATFANKGVMKDAHLITRIETASGKVLAEHRETSTKVIDRSVADKM
                     TAMMLGTYTNGTGVTADAANYYIAGKTGTTETSFDVNLVNDQWHIAYTPDLVISQWVG
                     FEQTDENHYIDSSSYWMAPSVFQTVANSILPYTAGTQFEVENAYAQNGIVEVAPDEAA
                     QTESSLGQEQVQEISDQARNLIEQTKQNLIDAQLPERAKTLWDNITSWFGELSNP"
     gene            10748..10900
                     /gene="rpmG"
                     /locus_tag="U1021_001098"
     CDS             10748..10900
                     /gene="rpmG"
                     /locus_tag="U1021_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015912025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEM4711646.1"
                     /translation="MALKKASLACTVCGSRNYSISLSSNPKPTRLEVNKFCKHCGQYT
                     VHKETR"
     gene            10910..11086
                     /gene="secE"
                     /locus_tag="U1021_001099"
     CDS             10910..11086
                     /gene="secE"
                     /locus_tag="U1021_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEM4711647.1"
                     /translation="MKFIKDIIRILKDTSWPTRKQSWTDFVSVVEYTAFFVAVVYLFD
                     LILSRGIMSLINLF"
     gene            11196..11735
                     /gene="nusG"
                     /locus_tag="U1021_001100"
     CDS             11196..11735
                     /gene="nusG"
                     /locus_tag="U1021_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEM4711648.1"
                     /translation="MYDSFDKGWFVLQTYSGYENKVKENLLQRAHTYNMLENILRVEI
                     PTQTVQVEKNGEVKEVEENRFPGYVLVEMVMTDEAWFVVRNTPNVTGFVGSHGNRSKP
                     TPLLEEEIRQILVSMGQTVQEFDIDVKVGDVVRIIEGAFSGYEGKVAEIDNNKVKMVI
                     SMFGNDTIAEVNLNQIADL"
     gene            11880..16940
                     /locus_tag="U1021_001101"
     CDS             11880..16940
                     /locus_tag="U1021_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEM4711649.1"
                     /translation="MKQKWFQIESKQRFGIKKLSVGVASVSIGFFITGVPMVQADTSG
                     EELQPRVMLARAMDSKQDAEVEKEDEPVKMEQVDEPVAEEEVVAEVVDTEAEEESGFL
                     ADRAVTEIEVVVDKTREETREKEDFNVKETSAPQTSPQESQLEPEEVTRGRYILQFSD
                     ENRNLVLDKLKKIDGVKIVHEYKEVLTGASVEVGKESLSDVKAITELTYLEESRRIRP
                     TLHTAKQLVGALKASSKYQTDGRGMVIAVIDSGLDIKHKDMRLDEGVVPKIKEITPST
                     TGTYTLKVPHGYNYVSGNDNLYDDTHEPHGMHIAGTLAGNATDEEVASKQGIDGIAPN
                     AQLLVYKIFSNDPKNYKAETEDAAYAAIEDAIKHGADVISLSVGYYDSGLPGNAYYTI
                     AKRAAEKGIIITAAIGNAGASSSDTSFDLHTNNALGAVDTATTVGVAATPAVIGVGSA
                     RNTHLVQREFMLNGQSFGYYPIGYTTLPEGNYEFVDAGNGHWEEVQGLDLAGKVAVIK
                     KDKFDLKDAVRNLKFKDVAGIIVINTDQGWNKDYYRTHQLLVDDKTLLSYSSIWGISL
                     SGEDGRRLLEVANQSQGNTGLVLKPTIGMKKLIEVPTVSGFSSWGPTVNLELKPEIVA
                     PGEDVYATLNDNRYGSMSGTSMASPIVAGASALLLPRIRQMTPPEGMTRMDLLRIILM
                     NTATPLIDVLDSSGHALENSPRQQGAGLLQIDRAFETDVILHHRLKGGVELKEIGRET
                     EFEVTLENLGNQQRNFAISAGKVLTSQDVPVDRIGRSGKVVKEIHATEIKGSSLHLSE
                     QSIQLGPKEKKTIRLRLDAGEAKDQFAEGYIYFKSLTEGQSDISIPYFGFVGDWSKER
                     IVDAPAWETSSKLKLTSVLSSYKHNKSGRYIELGREKIQDNQSPLNPDNIAIQNQHSD
                     SQIGNAFVRFALLRDITNYDLDIVKEATEDAPVLRRIDTGTMLSRVRYVDYFESLSEY
                     SKLRTPIELHRWDGKVYDASKDENIPAPEGQYFFRLRVKNKENGAYQYTYLPVKIDNQ
                     KPEIVAIDTNRLTSHRELVVTAKDNNKVWEVRANLNGEDLLVEKVVDDAGQLHYHLKE
                     VELPLDAKNHLRVEVMDIAGNVVAVEKDLVAPVIQFKNLEDLMAIRSKKTVEIKANVS
                     AQVSDVQANLDAQAVNYSLENGQLSLQIPEQSDGHHSFELILKDKDGNPIYTKTLNYL
                     VDNEKPTIDLDIEKDEEDEEVIQIGKNGRFTLKGKVSDNVSLPKNIKLYYSNLDIGKG
                     KLKIIDVKEDGSFEQDFFKSDFPRAIILTAVDEKGNKLKDLRINTSPESLDEEEETEV
                     PITVNNWLIDPIRFNKESLGRELDSGLVDFKKQEDGTYLFTFEIEAETDQAHSVRING
                     GEKRYFEDGKLTYPVTLIEEGNVVDISVYNEADELTYTKKYQMLVDTENPVLQLENEV
                     LPLERQVVDSEEDEDEENQYAGVLLADADGHLTLTGSAKDNGIYWSLKINEDFVARGG
                     FWRQYGNNEKAFRYELHSLKDGDTVKLDLSDSFGNALVKKYKVRLNDKEVSEQVPEKD
                     LHVEQSDKDQAPSIPILKSEAYVPMPKEENSLAPQTESTEIALLTGDTREDGVEHLGR
                     FTKHEEALGISDERIEVSVPHREFFERSGRGETGALAADTSGKLPQTGDSLGSVFISA
                     LLGLFGGAMALGNLKRKE"
BASE COUNT         5232 a         2870 c         4001 g         4909 t
ORIGIN      
        1 aggaaagcga aattgtctct gacttgaaac agtttagaaa acttgccaaa aactgtctta
       61 tgcaaagaga ttatgaggct ttgggctttc tatatgaaag ggaaaagggc accctatctc
      121 atctgaactt tccagaccaa gtttatttgg aatgggtgga ggctgtttta gcagagaatt
      181 tggaagcaag gcgagaagat gctattcaga aattgaggga gttactggaa cgagttgggg
      241 agaataggag aggctacctc tatctgtaca atagtttatt gattctattg attcgagatg
      301 agaagaatgc tgaggcagag caattctata gtgaggtaat cgaaaagatt gataaaaata
      361 agttggattt attggtggat atagatgctt acttcagtat tcagtccaac tacatccgct
      421 acctatggtt gacaaatcag ttggaaaagg gaattgagct ggttacagcc tgcattgagg
      481 aattcaagtc aatctatcct atccatttct tggcagattt ttattgtgac ttaggaaatg
      541 tgacagaaga ctttgcggat aagcaactgg tcaaaaaacg ctatgaacta tcacgacttc
      601 tttacgagtt agcaggcatt gatgctattg ctttgaaaat agaaaaatac ctcaaagaaa
      661 cctatacaga ttgagcttgc tccagagggg caggcttctt tttatatcaa aaatataaca
      721 ataataaatt ttgttagaaa aatatcaaaa aacattgaca ataggtaacg aaacggttat
      781 actatagaaa agaaaggggt tacaaaatga aaagaatagt taagagtgtt ttggtggtgg
      841 gattactagc ggttatttta attagagttc cacaattgcc gagagttttt ggtgtagata
      901 gagaagaaat atttatctat gcaaaatagt tagggcggag tatatatgtt taaaaaatat
      961 gcttgcactt tgcaacatga ccagtcagat tgtgcagcag ctgttgtctc cactgtatta
     1021 ttgacctata aaaaagaact ttcaataatg aaaattcggg aaattattgg aacagatatg
     1081 tatggaacga ccgttcacgg aattgtttct ggtcttgaaa agttaaattt taccgtaaag
     1141 gcagttcgag tatccttgga tgacttaact ggagatatta gctttccagc tatactacaa
     1201 atacggaata gtctggggca gaatcatttt atagtgattc ataagataaa gaaagatggt
     1261 aattatttgg tagctgatcc agcaaaagga ctggatatgc tttcaattac agaacttgag
     1321 gaagtttatc aaggaatagc cattttcatg gttccaaata gcgagtttga aaaaggaaac
     1381 atgaaaggca aaggactatt tgacttattt tcagctctga tattaacaca gaaaggactt
     1441 gtggggacaa tcatcttagc atcattcttg ctaagtatcg ttggtatttt gtctagtctt
     1501 ttttccaaag ttattatgga tgagattatt ccctttggat taaagaacag cttatactta
     1561 ttcttgattg tttttggcat cgtttcttta gtgcagagtc tcttatctgc ttttaggcaa
     1621 catattttgc tatttctatc aagaaaaatt gatattcctg tgctcctggg ctattatgac
     1681 catattattc acctacctta tagttttttc ggtagcagaa gggtgggtga tgtcttgaca
     1741 cggtttcaag atgccatgac gataaagaat gtttttacct cggtttctat ttcgttagtt
     1801 atggatatta gcctatcact gataagtgcc tttgttttat ggcatctcaa ccccacttta
     1861 tttctaatat tggttatgat agtgattgtg aatatcgtgt taatttattg cttcaagaaa
     1921 ccttataaga agattaataa tgagcagatg gaagcaaact ctatgcttaa ttcgcaattg
     1981 atagaatcta ttcgtaacat agataccata aaatcacagc atgatgaacg acaacgtttg
     2041 gataaactag aagagaattt tgttcacacc ttagaaattg gctataaaga aggtttttta
     2101 caaaatattc aatctacaat ttcttctata gccggaactc tagggaattt gatttttatg
     2161 ggagtgggag ccttatttat tattgataac aagatgacaa ttggtgatct tcttgttttt
     2221 cagaccttga gtcagtattt tactgagcct gttcagaatt tggttggtct ccaacttact
     2281 ttccaggaag ttcaggttgc tgttagccga cttcaagaat tgatggatgt tgagcgtgaa
     2341 gatagtcaag tagggaatag tatccataat ttttcgttat tggaagatat tgtcttcaaa
     2401 aacgtttctt tcgcttacgg gtctagaccg cctattattc gagattttag tttgataatc
     2461 aaacaaggtg aaaaaatagc ttttgtaggt gaaagtggag caggaaagag tactcttgta
     2521 cgacttcttc ttcatttcat tcagcctatt gaaggtcaaa taaagtttgg tgagtatgac
     2581 ttaggggatc tagattatgg agaattacgg aaaagaatag cttatatccc tcaaatagtc
     2641 gagctctttt cagggactat aattgataat ttaaagatag gaaatccaga agctagctat
     2701 gaggatatga tacgtgtatg ccgcatagta gggattcatg acacaattca aaaattacaa
     2761 aaccgatatg gttcttttgt tgaagaaggt ggccagaatt tctcaggagg agaaaaacaa
     2821 cgtcttgcta ttgcccgagc tcttcttagt aaagcagatc tttatatttt tgatgaagca
     2881 acttccaatc tagattcctt tagtgaacag attatccaaa atttaatatt tgaaaaaatt
     2941 attggcaaga cgacagttgt agtggcccac agattatcaa cgattctacg ttgtgataaa
     3001 atctgttttt tggaagacgg gaaaattgca gaatatggga cgcatgatga gttgatgaag
     3061 ttgggtggcc gctatgcaac aatggttggt ttacaaagca ttcaactaga taagcaagaa
     3121 aaaacagttg ctactagctg gtcagaagag gtggtatatg agtaagttag aagtattaga
     3181 aaacaagaaa ttagttttga aaaaagtgat ttgtaagaag ctaagtagcc ttcagtttga
     3241 agacttggaa caagaaatag ataagtttta tcagcactta caattactga aagtgcaaat
     3301 gtttggccct ttgattgtaa aaaatagtgg aactattctt catgaagatg ggactattac
     3361 tgtagactat gatttgtatg tccaagctca tgattttcgc cagtatgata agttttatac
     3421 tgtttatgaa gaaattgttt gtccacattg tgtctatgta cgatttgaag atagtccaga
     3481 gtatttgcaa tatgcatatt ctaaactaga tttacatttc tatgaaaatg atttggaaac
     3541 aaatggcatt atttacaccg tctatgtcaa tacaaataat gaaaccatga cggtggatat
     3601 ttttagaccg attattagct tatgaaacta tataacaaat ctgaacttcg ttattctaga
     3661 atcttcttcg ataagcgtcc tccagcctac gcgtttatcc taatctttag tacactagct
     3721 actttgatta tagcttttgc agtatctgcc tatttgccta aaaattacat agtcaaagct
     3781 agggggactt ccgtgataac aggaacagag tatgtatctg ctctgagcaa tgggaagatt
     3841 gtgacacttc ataaaaagga aggggatagt gtaaaagctg gtgaggttat tctttctcta
     3901 tctagtggac aagaaggact tcagactgaa tctttaacta aacaattgga caagctcaaa
     3961 gctaaagaga gtctctttca aaagtatgaa cagtctctga atgaaaaagt taattatatg
     4021 gcaaattcag gtgaagagca ggagtattac gggaaggtag aatattatct atctcaactt
     4081 agctcagaaa actataatga tggtagtcaa tatgctaagt tgcaggaaga gtacactaag
     4141 ttgaataaat tagtggcgga gaaaagtcaa ttagaaacgg acttgtctag ttaccaatcg
     4201 caacttgcta atttagaggc agaattggca actctttctg ttcaagagac agcagaaacg
     4261 aattccgata gtgagaccaa ttcatcatct actgactctt ctcctaatag cattcagttg
     4321 gagcagctaa atacaaaaat atcagaagtc aaaacaaaaa ttgaaacgat aacttcttct
     4381 atacagggaa aggggacgga aatagagtcc ctacagtcta gtattaggga gatggagcgt
     4441 tcttacaatg atcctacttc tcaagcttac aacacttatg cccagttaat cagtgagtta
     4501 gggacagcaa gggcagccaa taataaaagc ataacagagt tagaagctaa tttagggatt
     4561 tccacaggtc aggatagagg gctaactgtt tctgcctcca gtgacggaac tctacattat
     4621 gttactccgc tcaagcaagg catgtctgtc caacaaaatc agactgtcgc tgaaattgct
     4681 ggtagtgata gagaagccta tatagaagct tttgttcttg cgacagatat ttcccgtgtt
     4741 actgttggtg cagaggtaga catagctatc acgggtgtaa atagtcagaa atttggtacc
     4801 ttaaaaggtg ctgtaactca gattgactct ggaacgatta ctcaggaaac tcagaatggt
     4861 aatgttagtc tttacaaggt ggttgttgct cttgaagaat taactctaca aaaagatgaa
     4921 gaaattgtag ttttacaaaa agatatgcca gttgaggctc gtatcgttta tgataatgaa
     4981 acctatttgg attggattct agaattgctg agttttaaac aataatggtt ttacaccttt
     5041 gtagcagata aatcccaaca gagtggatga aagacccctc tgttagaatg agaaacgttg
     5101 cttatatcca gttagaggat cgcatctaac catgaatttt aaaggagaat ttttatggaa
     5161 ttagtactac caaataatta tgtggctctt gaacaagaag aaataatgta tcttgacgga
     5221 gagggatgga ttgcagattc gtttgctgtt ggtggaggag taattaaggg atttgtttgg
     5281 gctgtccaaa ctgcttcata tgcgagtgca ttaggaactg tagctctacc gatagtagga
     5341 actgtttctg tcgggacact tggagcaatc tcgggagcgg ttacaggata tattactggt
     5401 tataaaactg gcagatggtt aggtcgttgg attgagacaa atattcttgg atggaagtaa
     5461 gatgttaaaa aaaacaacct ttgacaagat ttccaaagtt atatttacta tacaaccaat
     5521 ctctattgtg ttcttcttta ttcaagtgga atcgtggtgg tatttctgga tactattaat
     5581 tttgttttta tttgatttta tgtttgttgt ttaccttata tggtactatc tttataaaaa
     5641 aatattaaag aaaaatcaaa aaaataagtg ataaagaaac ctatttggat tggattctag
     5701 aattgttgag ttttaaacaa tagtggtttt acatctttac agtagataaa tcccaacagt
     5761 gtggatgaaa ggcccttctg ctatctaggt aaagaatgag aaacgatgat tatatccagt
     5821 tagaggattg cgtctaacca tgatttttaa aggagaattt ttatggaatt agtaatgccg
     5881 aataattatg tagttcttga agaagaagaa atgatgtacc ttgatggggg atggagtgct
     5941 tctgttttag gaaataatct ttggggagca gctaaaaaat ttgcggtagt attctcggtt
     6001 gttaatgcaa tggcaaaatc attgggttat gttaatgcgg gtgctttagc tgccttaaaa
     6061 ggaagttttt catttattgt aggtaagata tcctgggcaa ttgggaagtt tgtagggata
     6121 attggtggat tttggactgg atttttagct ggatttagtg caggagcagc attgacttat
     6181 cttggtaata atagggtatt ttattaagat gaatactctc tatatatttg ttgccctatc
     6241 gctaaatgta gttgtgctga accaactcta tctcctttac aagaagaagg aagagttgaa
     6301 tgctacagtt gcctttctgg tttgcttact cgtgactgtt cttcccagtg cacaggactt
     6361 tcatggactt cttggcttga ttacaggagc tcttgttatc gtctatttgg gaagttttgt
     6421 ctattccaga ttggctccta agaaaagaac tgctaaatag atattactga cacgtaaaaa
     6481 ctcactattt caactgatga aatagtgagt ttctttactt tctcaacacc ttctcaaaac
     6541 tctctgaccg tgcttctaca ctgatttctt ccaaggtcag cgggtgggtc aggctgagtt
     6601 tttgggcgtg gagcatgagg cggggggctg cgactcgact gtaaagcggg tcaccgacta
     6661 gagcatgacc atgatgagac aaatgcaccc gaatctgatg tgtccttcct gtctggagac
     6721 gacaggaaac tagactattt ttaccaaggg tcttcaggcg gcggacctgg gtaagagctg
     6781 cctgcccctt gcggttgtcg accacccgct ttctgcggtc atgccgatcc cgtccaatct
     6841 tatcggtaat agtccagtgt gtctttttta gctggccttg gcagagggcg agatagtcac
     6901 ggtagataac cttgtcctcc aaaagccgat tgagaatggg caggataaag ggatttttag
     6961 caaagagaat ggctccgctg gtttccatat caagtctgtg gaccacatag caggtctgac
     7021 cgacataggc ggacacatgg ttgagcaggg caatttccgt cggctcattg ccgtgggttt
     7081 tcataccttc aggcttgttg acgataatca aatgctcatc ttgatagagt tcttccacca
     7141 agtccgcctg tcctagagga atgctttttt caggataatc ttcctggtca aaggtcaatt
     7201 ccagcaggtc gcctgcggca atcgggctct gccagtttat cagctcaccg ttgacacgga
     7261 cgtgcttctt ggtgcggagg aagtggcgga tttttctggg aatgagaaaa taatcttcca
     7321 agacttcttt gacagtcagt tgtggaaagg cttggggaat gcgaatgtca attttcatct
     7381 tataggctgg ttgagtgctt gggttgcact ttttcgtttg gattgaggta gttcatggca
     7441 ttgttgactg cggttggggc ttcgccaaga ccagtcgcaa tcaggtcaat cttgccctcg
     7501 tagaagcaac agtcaccgat ggcatagata ccagggacgg aggtttcttg cttactgttg
     7561 acggtaatgc ggtggcgatt gagttccaat ccccattctt ttagcgtgcc gatagatgat
     7621 ttgaaaccgt agttgacaaa gaggtggtca aaagacaggg tgagcttgtc ctcgcttttt
     7681 accttatcga aatcaatggc agaagctctg ccattttccc cagaaagccc tttagggata
     7741 aaaggtgtgt ggatggtgac gctggactgc ttgagttcct ctacgctgtg ttcaagggcg
     7801 cggaagttgt cgcgacggtg gacaatgtga gtagtcttag caattttttc aaaggccagg
     7861 gaccaatcga ccgcagaatc accaccaccc aagacgacga tgtccttgtc ggcatactgc
     7921 tggatattag acacgtggta atggacgttg tcaaagctgt cagcaccatc aatctccagc
     7981 ggacgtggct tgaaggcccc gccacccatg gcgataatca gagtcttggt ctggtggcag
     8041 cccttgttgg ttgttagggt aatggtttcc ccaggtttga tagcagtcag ggtttcattg
     8101 aggcagatgg tagtatcaaa tggagccagt tgagcgagga ggttgtcggt caactcttgt
     8161 cctgtcagac ttgggaaggc aggaatgtcc aaaatggcct tttcaggata gagaatggca
     8221 ggctggccac ccagttgggg cagggagtca atgattttga ccttggcttg acggaggtgg
     8281 gcgtagaaag cggcgaataa accgactgga ccgccgccga tgatagtaat gtcatatact
     8341 tgtgtcatgg gaatcctctt ctttgttcag aatgacccta ttttatcata tttttggaaa
     8401 attttctctg tctgttgtca caagttatcg caggcttttt tctgctagtt tttaggaaat
     8461 ggtgtataat ggtacaaaat tcactagaaa gaggtaaagt atggacgatt tgcaatacca
     8521 gccaatcgaa gttccagaag atttccaaat tgatcatgaa gaccgaccta gccgtcgccg
     8581 caggggaaat cgtggctctg ttgataaacc aaagaaaaaa tcacgtattc cagagccgat
     8641 tcgtaaattt tggcgccgtt atcaactgac taaaatttta atcattttaa tggtcctgac
     8701 agttcttaca gtaggtggct atctattttt ccttgcaaag acagctaatg ttggtgattt
     8761 acaacaggcg ctaaaagcca caacgattat ttacgataaa gatggtgcgg aagctgggac
     8821 attgtctggt cagaagggga cctatgtaga gctggatgct gtctctgata atttagagaa
     8881 tgccgttatc gctacagaag atcggagctt ctacaaaaat tcaggcatta attaccagcg
     8941 tacaattttg gctgccttga cgttaggtcg gtctggaggt ggttcaacta ttacccagca
     9001 attggcaaaa aatgcctttc taactcagga tcagaccatc agtcgaaagg ctcgagaatt
     9061 ctttttggct ctggaaatca ataaaaagta cagcaagcaa gaaattttga ccatgtatct
     9121 caacaatgcc tactttggaa acggtgtttg gggagtggaa gatgcaagtc aaaagtactt
     9181 cggtattcca gccagtgatc ttactcttga gcaagcggcc gtcatagcag gtatgctcaa
     9241 gggacctgag atttataatc cttattattc tctcgaaaat gcagttaatc gtcgggatac
     9301 agtcctgcaa aatatggtca atgctggtta tattgatcaa gcgactgcag atgcaggttt
     9361 ccaagtagac ctagccagtc agctttcaga tacctataca gggaaacaaa gcaattattc
     9421 ctatccatcc tattttgatg ctgtgattgc tgaagcgatt gagcgatacg gactgaaaga
     9481 atcagacatt attaataacg gctataggat ttacacagag atggatcaaa attctcaagc
     9541 cagcatgcag gtgattttta atgatgagac tatgttccca acatcaagtt ttgatggtac
     9601 ccatgctcag gctgccagcg tagctcttga tcctaggact ggtggagttc gcgccttggt
     9661 tggtcgagtt aacagttcag aggatgcggt ctttcggact ttcaactttg cgacacaagc
     9721 caagcgcagt cctggttcaa caatcaagcc tcttgttgcc tatgctccag cagtagcggc
     9781 gggctggtcg attgatatgg ctctggataa ccatacagaa acctacggcg attacacctt
     9841 gcataactat gattattcga cttctgacac cattccaatg tatcaagctt tggctctctc
     9901 ttacaattta ccagtagctt atatagtgaa caccttgggg attgacaaag ccttcgagta
     9961 tggacaaaag tttggacttg atatggaaaa tgtcgagaaa gttttgggtg tttcaattgg
    10021 ttctggagtg gagactaatc ctctgcaaat ggcccaggcc tacgctactt ttgcgaataa
    10081 gggtgtgatg aaggatgccc acctcatcac tcgtattgaa actgctagtg gaaaggtttt
    10141 agcagagcat cgagaaacaa gtaccaaggt gattgaccgc tctgtcgcag ataagatgac
    10201 agcaatgatg cttggaacct ataccaatgg tacaggagtg acagcagatg cggccaatta
    10261 ttatattgct gggaaaacag gaacaaccga aacgagtttt gatgtcaatc ttgtcaatga
    10321 tcagtggcat attgcctaca cacctgattt ggtcatcagt cagtgggttg gttttgagca
    10381 gacagatgaa aatcattata tagatagcag tagctactgg atggctccat cggtcttcca
    10441 gactgtagcc aattcaatct tgccatatac tgcaggaact cagttcgaag tagaaaatgc
    10501 ctatgcacaa aatggtattg tagaagtagc tccagatgaa gctgcgcaaa ctgaatcaag
    10561 ccttggtcaa gaacaggtac aagaaatttc agatcaggcg agaaacttga ttgagcaaac
    10621 caaacaaaat ctaatcgatg cccagttacc agaacgagca aaaaccttgt gggataacat
    10681 cacgtcttgg tttggagagt tgtcaaatcc ataaaaacat ggtagaatga aaaagatgga
    10741 gggctttatg gcactaaaaa aagcaagcct agcctgtact gtttgtggtt ctcgaaacta
    10801 ttcaatcagc ctttcgagca atcccaagcc aacacggtta gaagtaaata aattttgtaa
    10861 acactgtgga caatacactg ttcacaagga aaccagatag gagtcacgca tgaaatttat
    10921 caaagacatt atccgcattt taaaagatac gtcttggcca actcgtaagc agagctggac
    10981 ggatttcgtg tctgtagtgg aatatactgc ctttttcgta gcggtggttt acctctttga
    11041 cttgattttg tcacgaggaa tcatgagctt gatcaatctt ttctagaaaa tacttgccat
    11101 ttgtaaaatg gaagtgatat aataaggaaa agcgaaagcc ttcgggcttt ttttagcgtc
    11161 taaaaattcc gtgtttccaa agaaaggaag taacaatgta cgatagtttt gataaaggct
    11221 ggtttgtttt acagacctac tcaggatatg aaaataaagt gaaggaaaac ttgctccaac
    11281 gtgcccacac ttataacatg ttggaaaaca tccttcgtgt agaaattcca actcagactg
    11341 ttcaggttga aaagaacggt gaggtcaagg aagtagaaga aaaccgtttc cctggttatg
    11401 ttttggttga gatggttatg accgatgaag cttggtttgt ggttcgtaac acgccaaacg
    11461 ttacaggttt cgtgggttca cacggtaacc gttcaaaacc aactccactt ttggaagaag
    11521 aaattcgtca aatcttggtg tctatggggc aaaccgttca agaatttgat attgatgtca
    11581 aagttggaga tgttgtgcgg attatcgaag gtgccttctc tggttacgaa ggaaaggtgg
    11641 cagagattga caacaacaag gtgaagatgg ttatctctat gtttggtaat gataccattg
    11701 ctgaagttaa tttgaaccag attgctgact tgtaataaat atgtaaaagc acagggaaac
    11761 ttgtgctttt tcttgttgtt gaggtagggt tcaaaaaaac ttgccaaata tttgaaaaaa
    11821 ttataaaatt aggtatactt aatttataaa ttaaccaaaa ttaaaaaacg gaggttttta
    11881 tgaaacaaaa gtggtttcaa atcgagagta aacaacgctt tggcatcaag aagttaagtg
    11941 tcggcgtggc atcggtatca ataggctttt ttatcacggg tgtcccgatg gttcaagcag
    12001 atactagcgg agaagaattg caacctaggg ttatgctagc aagggctatg gacagtaagc
    12061 aagatgctga ggtagagaaa gaagatgaac ccgttaaaat ggagcaggtg gatgaaccag
    12121 ttgctgaaga ggaagtggtc gcagaagttg tagatacaga ggcagaagaa gagtcaggtt
    12181 ttctcgcaga tcgagctgtg acggagatag aagttgtagt tgataaaaca agagaggaaa
    12241 caagagaaaa agaagacttt aacgtaaaag aaaccagtgc tcctcaaaca agcccgcagg
    12301 aatcacagct tgagccagaa gaggtgacaa gagggcgcta tattttacaa ttttccgacg
    12361 agaaccgaaa tcttgtattg gataaattaa agaaaattga tggtgttaaa attgttcatg
    12421 agtataagga agttttaacg ggagcatctg tagaggtggg gaaagaaagt ttgtctgatg
    12481 tgaaggcaat taccgaatta acctatttag aagagagtcg ccgtatacga ccgactcttc
    12541 atactgctaa acagctggtt ggtgccttaa aagcaagttc taaataccag acagatggtc
    12601 gcggaatggt gattgcggtc attgactctg gtttggatat taagcacaaa gacatgaggt
    12661 tggatgaagg tgtcgtccct aaaatcaagg aaattactcc atctacgacg ggaacataca
    12721 cactgaaagt tccccatggc tataattatg tatctggtaa cgataatctc tacgatgata
    12781 cccacgaacc acatggtatg catattgcag gaaccctggc tggaaatgca acagatgaag
    12841 aagttgcgtc taaacaggga attgacggga ttgctcccaa tgcacaacta ctagtctaca
    12901 agattttttc aaatgaccct aaaaattata aagctgagac ggaggatgcg gcctatgctg
    12961 ctattgaaga tgctatcaaa cacggggcag atgtcattag tttgagcgtt ggttattatg
    13021 atagcgggct gccagggaat gcttactaca cgattgctaa gagggcagca gaaaagggga
    13081 ttatcattac agcagctatt ggtaatgctg gtgcctcctc ttcagacacc tcctttgact
    13141 tgcatacaaa taatgcctta ggagctgtgg atacggcaac aacggttggt gtggcagcga
    13201 ctcccgcagt tatcggggtt ggttcggcaa gaaataccca tcttgttcaa cgtgaattta
    13261 tgctgaatgg gcagtctttt ggctactatc ctattggcta tacaacactt ccagagggaa
    13321 attatgaatt tgtagatgct ggaaatggtc attgggaaga agtgcaaggg cttgatttgg
    13381 ctggtaaagt agcggttatc aaaaaagata agtttgactt gaaagatgct gttcgtaatt
    13441 tgaaattcaa ggatgttgct ggaattattg tgataaatac tgatcaggga tggaacaagg
    13501 attattatag gacccatcag ttgttggtag atgataagac tttgctttcc tactcctcta
    13561 tctggggaat tagtcttagc ggggaagatg gaaggcgatt attagaagtt gccaaccaat
    13621 cgcaaggtaa cactggtttg gttcttaaac ctacaattgg aatgaagaag ttgattgaag
    13681 tgccgactgt atcaggcttt tctagttggg gacctacggt caacttagaa ttgaagccag
    13741 agattgtggc gccgggagag gatgtttatg caaccttgaa tgacaatcgt tatggctcca
    13801 tgtcagggac ttcgatggct tcgccaattg tggcgggtgc cagtgcactt ttattgccac
    13861 ggattcgcca aatgacacca ccagaaggca tgactaggat ggatttgctg agaatcattt
    13921 tgatgaatac tgctacccct ttgattgatg ttctagattc atctgggcat gctttggaaa
    13981 attctccgag acaacaaggt gctggtctgc tgcagatcga tagagccttt gaaacagatg
    14041 tgattcttca ccaccgtcta aaaggagggg tggaattaaa agaaataggg cgtgagacag
    14101 aatttgaggt gaccttggaa aatctgggaa accaacaaag aaactttgct atttcagctg
    14161 ggaaagtatt gactagtcaa gatgttcctg ttgatagaat aggacgttct ggaaaagtag
    14221 ttaaagagat tcatgcgaca gaaatcaagg gttcgagtct tcatctttct gagcaatcta
    14281 ttcaactggg gccgaaagag aagaaaacca ttcgcctgag attggatgca ggagaagcga
    14341 aagaccagtt tgcagaaggg tatatttact tcaaatcatt gacggagggg cagtcggaca
    14401 tcagcattcc ttattttggc tttgtgggtg actggtcaaa agaaaggatt gttgatgcac
    14461 cggcttggga aaccagttct aaattgaaac tgacctcggt tttatctagc tataaacaca
    14521 ataagtctgg gcgctatatt gaacttgggc gtgaaaagat tcaagataat caatcgcctc
    14581 taaatccaga caatatcgca attcaaaacc agcattcgga tagtcagatt gggaatgcct
    14641 ttgttcgatt tgcactattg agggatatta ccaactatga tttggatatt gtaaaagaag
    14701 ctacagaaga tgctcctgtt ttaaggcgga ttgatacagg aactatgctg tctcgtgttc
    14761 gctatgtaga ttattttgaa agtctatcgg agtattccaa gcttcgtact ccgatagaat
    14821 tgcatcgttg ggatgggaaa gtgtacgatg caagcaagga tgaaaatata ccagcaccgg
    14881 aaggacaata tttctttaga ttgcgggtaa aaaataaaga aaatggggcc tatcagtata
    14941 cctatctgcc agtcaaaatt gataatcaaa agccagaaat tgtcgcgatt gataccaatc
    15001 gtctgaccag ccatagagaa ctagtcgtca cagccaagga taataataaa gtttgggagg
    15061 ttcgagctaa tctaaatgga gaagatcttc ttgttgaaaa ggttgtagat gatgcaggtc
    15121 aactacatta ccatctcaaa gaagtggaac tgccactcga tgctaaaaat catctccgtg
    15181 ttgaggtgat ggatatagcg ggtaatgtgg ttgctgttga aaaagacttg gtggcgcctg
    15241 taatccagtt taaaaatttg gaagatttga tggcaattcg cagtaagaaa actgtagaaa
    15301 ttaaagcgaa cgtctcagcg caagtttccg atgtacaggc taacttggat gctcaggctg
    15361 tgaattactc tcttgagaat ggtcaactat ctctccagat tccagagcaa tcagatggac
    15421 atcatagttt tgaattaatc ttgaaagata aggatggcaa ccctatttac actaaaacct
    15481 tgaattattt ggtagataat gaaaagccga cgattgatct tgatattgaa aaagatgaag
    15541 aggatgaaga ggttatccag attggcaaaa acgggcgttt tacattgaag gggaaagtga
    15601 gtgataatgt tagtcttcct aagaacatca aactttacta ttccaatcta gacattggta
    15661 agggaaagct gaaaatcata gatgtaaaag aagacggcag ttttgagcaa gacttcttta
    15721 aatctgattt tcctagagcc atcatattaa cagcggtaga tgagaagggc aataaattaa
    15781 aggaccttcg tatcaataca agtccagaga gtctggatga ggaggaagaa acagaagttc
    15841 cgattactgt caataactgg ttgattgacc cgattcgttt caataaagaa agtcttggtc
    15901 gtgagctaga tagcgggttg gtcgacttca aaaagcaaga agatgggact tatctattta
    15961 catttgaaat agaagcagaa acggatcaag ctcattctgt gcgcatcaat ggtggcgaaa
    16021 aacgctattt tgaggatggc aagttgacct atccagttac cctgattgaa gagggaaatg
    16081 ttgtggatat aagtgtgtac aatgaggcgg atgagttgac ttacacgaag aaatatcaga
    16141 tgttggttga tacagaaaat cctgttttac agctggaaaa tgaggtgcta ccattggaaa
    16201 gacaggtagt ggatagtgaa gaagatgaag acgaggaaaa tcagtatgca ggagttctcc
    16261 tggcagatgc tgatgggcac ttgacactta ccggaagcgc caaggataat ggaatttatt
    16321 ggtccttgaa gatcaacgaa gattttgtag ctcgaggagg cttctggagg cagtatggaa
    16381 ataatgaaaa agcctttcgc tatgagctac atagtctgaa agacggggat acagtcaaac
    16441 ttgatttgag tgacagtttt ggaaatgctc ttgtgaagaa atataaggta cggttaaatg
    16501 acaaggaagt atctgagcaa gttcctgaaa aagaccttca tgtggagcaa tcagataagg
    16561 atcaagcccc tagcattcct attctgaaat cggaagcgta tgtaccaatg ccaaaagaag
    16621 agaattcact tgctccgcaa acagaatcca ctgaaatcgc gctgttaact ggcgatacaa
    16681 gagaagatgg tgtggagcat ttggggagat ttacaaaaca tgaggaggca ctaggaattt
    16741 ctgacgagag aatagaagtg tccgtacctc acagagaatt ctttgaaaga agcggaagag
    16801 gagagacagg tgcattagcg gcggatacta gtgggaaact gcctcaaact ggggatagcc
    16861 ttggaagtgt ctttataagt gctttgttag gtctatttgg tggagctatg gccctcggaa
    16921 atctgaagcg aaaagaatag caaaaaacct aggaagattc ctaggttttt tagaatatta
    16981 aaaggcggta gacggatttt atacccttga tg
//
LOCUS       DASFQD010000044        16947 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.044, whole genome shotgun sequence.
ACCESSION   DASFQD010000044 DASFQD010000000
VERSION     DASFQD010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 16947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16947
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.044"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..168)
                     /locus_tag="U1021_001102"
     CDS             complement(<1..168)
                     /locus_tag="U1021_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003002781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3042 family protein"
                     /protein_id="HEM4711650.1"
                     /translation="MAKGFGKGFLTGVLSTVALAAGAVFTVHKTIIEPEEKKEAFIEE
                     NRKKAARKRVAH"
     gene            237..1121
                     /gene="miaA"
                     /locus_tag="U1021_001103"
     CDS             237..1121
                     /gene="miaA"
                     /locus_tag="U1021_001103"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEM4711651.1"
                     /translation="MKTKVIVVIGPTAVGKTALGIDLAQRYNGEIISGDSQQVYRKLD
                     IGTAKASPEEQAAAVHHLIDVREVTEGYSAYEFVAEAKALIAGITSRGKLPIIVGGTG
                     LYIQSLLEGYHLGGQVDQEQVLAYRAELDCLSDEVLETMAEQAGLMVEGNSRRRIIRG
                     LELKKFGKNLENTESEYEPLYICLTDDRQVLYDRINQRVDKMMAAGLLDEVSWLYQEH
                     PEAQAAMGIGYKEFFPYLAGQISLEEAVDKVKQNSRRFAKRQLTWFRNRMQVPFYSVG
                     EPDYKSQIFTAVEEFLND"
     gene            1114..2364
                     /gene="hflX"
                     /locus_tag="U1021_001104"
     CDS             1114..2364
                     /gene="hflX"
                     /locus_tag="U1021_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEM4711652.1"
                     /translation="MIETQKEQERALLVGVELQQTDNFDMSMEELASLAKTAGALVKG
                     VYTQKREKYDSKTFVGSGKLDEIAQMVEADEIDTVIVNNRLTPRQNVNLEEILGVKVI
                     DRMQLILDIFAMRARSHEGKLQVHLAQLKYMLPRLVGQGIMLSRQAGGIGSRGPGESQ
                     LELNRRSIRNQIHDIERQLKTVEKNRATVRERRLQSGVFKIGLIGYTNAGKSTIMNAM
                     TDKQQYEADELFATLDATTKQINLADKFNVTLTDTVGFIQDLPTELISAFKSTLEESM
                     NVDLLLHVIDASDPNHSEQEQVVLDILKDLDMLDIPRLALYNKLDKTDDSFTPSQFPH
                     VMLSAKAENAKGHIQMMVLAKIKTMFERFEVRVPLAEAYKLHDLATLALIENRTYEED
                     VEVVSGYIASSNKWTLEEFYDGLS"
     gene            2348..2977
                     /locus_tag="U1021_001105"
     CDS             2348..2977
                     /locus_tag="U1021_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HEM4711653.1"
                     /translation="MTDYLDLAMKYGGFTSLDKVYLANKLAGMTDQQKLDFITPPPSV
                     INAYFAEIYQKQGAEEATDYYLTLSQQLSLFPKEPSFAEDKPFVRLNLSGKSFGFAYV
                     SADGLAQVFSEGVEEVTDSLLFEIAQVFPHYAVFVEEGKIFMKVNPFEEAELAEVETD
                     YLLTQVATAKGLVKISGFNQEEVLEVADGYAGQHYYVWSGRSAILYIKH"
     gene            2988..3917
                     /locus_tag="U1021_001106"
     CDS             2988..3917
                     /locus_tag="U1021_001106"
                     /EC_number="3.1.26.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000354350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HEM4711654.1"
                     /translation="MQIQFLGTGAGQPSKARNVSSLALKLLDEINQVWLFDCGEGTQN
                     QILETTIRPRKVAKIFITHLHGDHIFGLPGFLSSRSFQSSEEQTDIDIYGPVGIRSFV
                     LASLKVSGTRLPYRIHFHEFDVDTVGQVLETDKFTVFAEKLDHTIPCVGYRVIQKDLE
                     GTLDAEALRAAGVPFGPLFGKIKNGQNVTLEDGTEIIASDYISPPRPGKVVTILGDTR
                     KCYASVRLAVNADVLVHEATYGKGDEKIARKHGHSTNMEAAQVAKDAGVKQLLLNHIS
                     PRFLSKDISQLRKDASTIFEQVHIVKDLEEIEL"
     gene            3914..4669
                     /locus_tag="U1021_001107"
     CDS             3914..4669
                     /locus_tag="U1021_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM4711655.1"
                     /translation="MRTILITGASGGLVQEMVPLLKDDFLILLGRDVAKIEQLYAYHD
                     KKAVFDVDIRDEIALTAFFDELDSQFGQIDILVNNAGYAIYDDFENFSSQQVQAMFDI
                     NTFALMTLCRLVGKRMKARRSGQIINIISMSGLIASSKSSVYSATKFAAMGFSNTIRL
                     ELAQYGVTVTTVNPGPIATSFFDQADPDGSYQESVKAFLLQPDYVAKKIVAAMGTRKR
                     EINLPWSLAAAHKLYTLFPRIADYLASTVFNLK"
     gene            complement(4713..7898)
                     /locus_tag="U1021_001108"
     CDS             complement(4713..7898)
                     /locus_tag="U1021_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4711656.1"
                     /translation="MKLSYKKRLLNQVLLASTVLLAASLAQGTVFANTEEIPPTTSET
                     VTPLPEETPIMETSTSEATDNLVEGKETEKQTEEIADTSPTPVSTEEDTTSSEPNAEE
                     TTLRTANNDNQNTTEEKTAVPTIDTITLETKTVYLSEAVTITESVTLPDTTEKIEWTL
                     DGKPISEWKTWNLKEGDFTGDTFITVEESRQDNQLHLNIQLAALFGEDLSKRTPSNIR
                     RTYRHFIKDMLLEGTSADGNLIISKTLHFRPYEAYRTHEEMLTEIEETKNNAATDRLV
                     RIESIGQSAEGRDIKMAVVAKDQASIDKYLTETTPLMLTQPDQMLKQLQAGTFDYKLP
                     ILINNTHADEQPGIDVVTSLFKEFSQKDTITFPSTDADGNPVTLHLKVTDLLDKFIFL
                     FNFTENPDGDVKNLRSLVNGLDPNRDTGFQVNPETQAIVRQIHKWNPISVLDIHGFVS
                     GFLIEPATPPHDPNFEYDLLADIMLEKAHEMGRAGIANSKYERYTIPKVHWGDGWDDS
                     FSGYTAVYAMYHGILGHTIEIPEGNQESFKAGFFAVLGGVHNMATKPDTLMEMRLKYY
                     SRGVNKVEDPKAEAELVGPDGAVVGRVKKDQPKFFPDYYVIPMTLDKHNDMQEAFKMI
                     EYFNRNGVVVKELTEDVGNFRKGDLVVDMAQAKRGFANHVLYAGSDESAWGAMYAELV
                     VNFPDMKGFSAKAVFEENAFSGKLGSITWTKAPRTTEIDFKAPYYVVANTSESAVQAI
                     NQAIKSGAKVYLTDDGYIMETSQFSHLLDTYALYGEPLYKKPIGQELKPMKVYAPSHF
                     YSWAGDFAILANAALAVERMGFEIVNSADEADAIILESDQFDASVFGKKPIIIVGGVA
                     MQKLEELGILAGFNAEQFTDGGDYEGLMRAIIDDKDPLTSGYAMNGLFYSNSGNWIEG
                     IPEGFKILVKIADKDYYIAGWWPGHDKLANKIVAIAGNYQDQPVFIYAGNPTNKVHPV
                     HFFRWVSNALFGSQLATLEDLPAVEILVPQPEMPKNILDEAPKNTTVVHTTKSTDEKQ
                     LPQTGEKTNYIAIALGSLLLGSIALRRKERS"
     gene            8114..9661
                     /gene="cls"
                     /locus_tag="U1021_001109"
     CDS             8114..9661
                     /gene="cls"
                     /locus_tag="U1021_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HEM4711657.1"
                     /translation="MEKLWKIIYSRTFIVISLIILTIFLILWLVGSAATYMPALLIVL
                     QIFSIFVAISIINRPMNTSFKLIWIIFVIGIPIFGALFYFILQSNIETKRYRKNFHKQ
                     AQRLREYSKTSEKVMKALEQEDKEQLKLAHFMSEYVGYPIHTNTAAVYFSTGQEKFEA
                     LLEELKKAEQYIFMEYFIVDMGYMWDSILDILKEKAAQGVEVRFMYDGMNSLTNLPYN
                     YYKTLRKYGIKAKVFSQIIPALSTVQNNRDHRKIAIIDGKVAFTGGINIADEYINKKV
                     RFGYWKDAAIMIRGEAVANFTLMFLQMWNYNEKTETDDLKYLKTHKDLETETVDAEGF
                     FLPYGENPFDGDEVAKRVCLDMIQSATDYIYIMTPYLVLDDEMIDNLTYAAKRGVEVR
                     ILLPHIYDKKSAYLAARTDFPTYLEAGIEIFEFQPGFVHSKVVLVDDKKATVGTVNMD
                     FRSFYLNFECGLYIYNHSAVLAAIKDDFTHSFKKSQQINLLTFHKTYSWYKRLGGALL
                     RIISPLL"
     gene            9818..12031
                     /gene="recJ"
                     /locus_tag="U1021_001110"
     CDS             9818..12031
                     /gene="recJ"
                     /locus_tag="U1021_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEM4711658.1"
                     /translation="MIKPNFEWQLLTGFSDEQFIKIAKKEGVDPVAAKLLYERGIHSA
                     EELHTFLQPSLEDLHDPYLLHDIDKAVERIRRAIEDYEQILIYGDYDADGMTSASILK
                     ETLEEMGAEVQVYLPNRFTDGYGPNQSVYKYFIEQQGISLIVTVDNGVAGHEAIAYAQ
                     EMGVDVVVTDHHSMQETLPNAYAIVHPEHPEGNYPFKHLAGCGVAFKLACALLETVHA
                     DLLDLVAIGTIADMVSLTDENRVMVKYGLSLLKQTERAGLQELIKIAGIDIDSIDEET
                     VGFQLAPRLNALGRLDDPNPAIELLTGFDDEEAHQIALMIDSKNVERKDVVQAIYDEA
                     KTMLRQDRPVQVLAKEGWNPGVLGIVAGRLLEELQQPVIVLSIEDGKAKGSARSVEAV
                     DIFKALKDHQDLFIAFGGHAGAAGMTLEVDKLEELALTLTDYIIENKLDLSSKSSLVL
                     DEELDLEELTLDTLKSFEKLAPYGMDNKKPVFYIRDFQVESARTMGQNNAHLKLRITK
                     GAAGFDVLAFGKGNLALEFSQAKGLELAVTLSVNQWNGNTSLQLMLVDARVNGVQLYN
                     IRGKQHPIPAGVPILDIENPVADNKAIVLANLPEDLSSLRSYFQEREFEAIYFKNEIA
                     KPYYLDGYGSREQFAKLYKTIYQFDEFDVRYKLKDLAVYLKIKDSLLVKMIQIFQELE
                     FVTITDGVMRVNKDAQKREISESQIYQELKETVIQQELMALGTVQEIYEWLCGRV"
     gene            12010..13179
                     /locus_tag="U1021_001111"
     CDS             12010..13179
                     /locus_tag="U1021_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3114 domain-containing protein"
                     /protein_id="HEM4711659.1"
                     /translation="MAMWSRLMTVEALVVVGVIGTLLYTYWFIRQKGLLKNLEQITEI
                     KHALIELRRVGWSERAIKKVFLKQLLPLKQEDIPAFVQNFIKEATIFASTSFYQLIRV
                     DSRSLSQEKATALLEQCMNMLDFPEELSHGILPELLQKMDVNCPPHHPFWGDFAKLVD
                     KAFPVRELEVKRPLNRQVHQLRYLISYQQAFWVRQQFGKGNTDWQALIAYLRSLPRWS
                     YRLRESARLHNKQLFGKKNQKTLPVNMKILIHFHSEFILNQDGQFALILEERPHVNGV
                     VNGASFNYARANNKRHRQLDMAPVGRQDPVFRKELLRSKMGVYLSPTRFRRYQKGRNE
                     VGWEQSYFNQQGSFSYGGHSRAACVANLRRRFAKDIGLKCTKKQFHGIMKSKNYF"
     gene            13194..13706
                     /locus_tag="U1021_001112"
     CDS             13194..13706
                     /locus_tag="U1021_001112"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001049318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEM4711660.1"
                     /translation="MNLKDYIATIPNYPKEGIEFRDISPLMADGNAYSYAVREIVQYA
                     TDKQIDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPREVISADYEKEYGVDTLT
                     MHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGIVAGCAFLIELDDLKGREAIG
                     DYDYKVLMHY"
     gene            13810..14751
                     /locus_tag="U1021_001113"
     CDS             13810..14751
                     /locus_tag="U1021_001113"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HEM4711661.1"
                     /translation="MPIKIEKSLPAVEILRKENIFVMDSDRASHQDIRPIKILILNLM
                     PQKIVTETQLLRLLANTPLQLEVEFLYMASHESKNTHSDHLKQFYKTFEQVRDSYFDG
                     LIVTGAPVENLPFEEVDYWQELTQVFDWSKTHVYSTLHICWGAQAGLYARYGVPKHSM
                     SRKLSGVYCQEVTNPTSPLMRGFDDEFRSPHSRYTEVREVDIAHLSGLTILSQGPEVG
                     LSILASKDLREIYSFGHLEYDRDTLAKEYQRDCIAGKNPHLPENYFKEDDPTSKPSLS
                     WNLPAAQFFTNWVNYAVYQETPYDWHIFEQSAQSASL"
     gene            14761..15435
                     /locus_tag="U1021_001114"
     CDS             14761..15435
                     /locus_tag="U1021_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain-containing protein"
                     /protein_id="HEM4711662.1"
                     /translation="MNYSQQFRQGHLVLPAAILFHYQELFPSADDFLIWQFFLYQNSS
                     AIESLAPSEIAQATGKTVAQVNQAIENLQDAGLLEFKTISIAGEIEMIFDALPAFEKL
                     DVLLTPKQAVEIVQPENDLKTLVGDFERELGRFLSPFEIEDLQKTIEDDKTSIDLVRA
                     ALKEAVFNNKTNWKYIQAILRNWRREGITTVAQVEAKNAEREIQTPKNVTVSSDFLDA
                     MDLWKD"
     gene            15437..16120
                     /locus_tag="U1021_001115"
     CDS             15437..16120
                     /locus_tag="U1021_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenine-N(1))-methyltransferase"
                     /protein_id="HEM4711663.1"
                     /translation="METKLSKRLETVASFVPQGARLVDVGSDHAYLPLFLVEQGRIDF
                     AIAGEVVQGPYQSALQNVEQAGQTEKILVRLANGLGAFETSDQMTAVTIAGMGGRLIA
                     EILEAGKEKLATIERLILQPNNREDDVRRWLEKNGFRLVSEKILEENGKLYEVLVAES
                     GQMRLSEVEHRFGPYLLEEASPVFVKKWRRELEKLSSALEQVPSERQGDRFAISQKIQ
                     QIQEVVHVS"
     gene            16110..16904
                     /locus_tag="U1021_001116"
     CDS             16110..16904
                     /locus_tag="U1021_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000881127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEM4711664.1"
                     /translation="MLASQVIERYQAFCPPSLAMEGDVKGLQIGTLNKEIQRVMVALD
                     IRETTVAEAIDKKVDLIIVKHAPIFRPINDLVADNPQTKMYLDLIKHDIAVYVSHTDI
                     DVVEGGLNDWFCELLEIQDTTYLIETAEGQGLGRVGTIAEQTLEELALKVKSVFDLDA
                     VRLVTYVHQAKQYVSRVAICGGSGGSYYHEALAKGADVYITGDIYYHTGQDMLTQGLL
                     AIDPGHHIEALFIKKIAELLEIWKAKEGWDVEILPSTVSTNPFRHL"
BASE COUNT         4844 a         3244 c         3892 g         4967 t
ORIGIN      
        1 atgtgctaca cgtttacgtg cagctttttt acgattttct tcaatgaaag cttctttctt
       61 ttcttctggt tcaatgattg ttttatgaac agtgaagact gcgcctgctg caagagcaac
      121 tgtagaaaga acacctgtta agaaaccttt accaaaacct ttagccatag ttatttctcc
      181 tttacttgtg ttataataga ttttagcgaa aaaacaaaat attttcaagg aaaaagatga
      241 agactaaagt tattgtggtc attggaccga cagcggtagg aaaaactgcc cttggcatag
      301 acttggccca gcgctacaat ggagaaatta ttagcggtga tagccagcaa gtctatcgca
      361 aactggatat cggtacagca aaggctagcc ctgaagagca ggctgctgcg gttcatcact
      421 tgattgatgt ccgagaggtg accgagggct attcggctta tgaatttgta gcagaagcca
      481 aggctttgat tgcaggcatt accagtcgtg gtaagctgcc tattatcgtg ggtgggacag
      541 gtctttacat ccagagcttg cttgaaggct accatctagg cggtcaagtt gaccaggagc
      601 aagttcttgc ttatcgggcg gaactcgact gcttgtctga cgaggttttg gaaacaatgg
      661 cagagcaggc aggtttgatg gtcgagggaa acagccgacg gagaatcatt cgtgggttag
      721 agttgaaaaa atttggcaaa aacttagaaa atacagagtc agaatatgag cctctttaca
      781 tctgcctgac ggatgacaga caggttcttt acgaccgcat caatcagcga gtggataaga
      841 tgatggcggc gggcttacta gatgaagtta gctggctcta ccaagaacac ccagaagccc
      901 aagctgctat gggaattggc tacaaggagt ttttccccta cttagcaggt caaatcagcc
      961 tagaagaagc agttgataag gtcaagcaaa atagtcgccg ctttgccaaa cgccaattga
     1021 cctggttcag aaatcggatg caggttccct tttattcagt aggcgagcca gattacaagt
     1081 cgcagatttt cactgccgtg gaggaatttt taaatgattg aaacgcagaa agaacaagaa
     1141 cgcgccctcc tggttggagt ggaattacag cagacagata attttgacat gtccatggag
     1201 gagttggcaa gtcttgccaa gacggctggc gctctggtaa agggagtcta cactcaaaaa
     1261 cgtgaaaaat acgacagcaa gacctttgta ggctcaggga aattggatga aattgcccag
     1321 atggtcgaag ctgacgagat tgataccgtc attgttaaca atcgactgac accccgccag
     1381 aatgtcaatt tggaggaaat tctgggggtt aaggtcatcg atcgtatgca gttgattttg
     1441 gatatttttg ccatgcgggc acggagtcac gagggaaaac tgcaggtcca cttggcccag
     1501 ctcaagtaca tgttgccacg cttggttgga cagggcatca tgctcagccg tcaggcaggt
     1561 ggtatcggct ctcgtggacc aggtgaaagc cagttggagc tcaaccgtcg tagcattcgc
     1621 aatcagattc atgacattga gcgccaactc aaaacagtgg agaaaaatcg ggcgactgtc
     1681 cgtgaacgcc gtctgcaatc aggcgtcttc aaaatcggct tgattggcta taccaatgct
     1741 ggtaagtcca ctattatgaa tgccatgacg gataagcaac agtacgaggc ggacgaactc
     1801 tttgccacgc ttgatgccac gaccaagcag attaacttgg ccgacaagtt caatgtgacc
     1861 ttgaccgata cggttggttt cattcaggat ctgccgaccg agttgatttc tgccttcaaa
     1921 tccaccttgg aagagtccat gaacgtggac ctcttgctcc atgtcattga cgcctcagat
     1981 cccaaccaca gcgagcagga gcaggtggtc ttggatattt tgaaagatct ggatatgctg
     2041 gacattcccc gtctggctct ctataacaag ctggacaaga ccgatgacag ctttacaccc
     2101 agtcagtttc ctcatgtcat gctgtccgct aaggctgaaa atgccaaagg ccatatacag
     2161 atgatggtct tggccaagat taagaccatg tttgagcggt ttgaggtcag ggttccactt
     2221 gctgaagcct ataaattaca tgatttagct actctggctc tgattgaaaa tcggacttat
     2281 gaagaggatg tggaagtggt atcaggctat atcgcttcca gcaataaatg gacgttggaa
     2341 gaattttatg acggattatc ttgatttggc aatgaaatac ggtggcttta ccagtctgga
     2401 caaggtctat ctggcaaata aattagctgg tatgactgac caacaaaaac tagattttat
     2461 cacgccaccg ccttcagtta tcaatgccta ttttgcggaa atctaccaga aacaaggagc
     2521 agaagaggcg accgactact atctgactct ttctcagcag ctgagccttt ttccaaaaga
     2581 acccagcttt gctgaggaca agccctttgt ccgcctgaat ttatctggta agtctttcgg
     2641 atttgcctat gtgtcggcgg acggtctggc ccaggttttt tcggaaggag tagaggaagt
     2701 gacggatagc ttgctctttg aaatcgccca agtctttcca cactatgccg tctttgtgga
     2761 ggagggcaag attttcatga aagtcaatcc ctttgaggaa gccgagttag cggaagttga
     2821 aacagattac cttttgaccc aagtggcgac agcgaaaggt ttggtcaaga tttcaggctt
     2881 taatcaggaa gaagtgctgg aagtggcgga cggctatgct ggtcagcatt actatgtctg
     2941 gtcgggtcgc tctgcaattt tatatataaa acattagaaa gtaaacaatg caaattcaat
     3001 ttttaggtac gggggctggt cagccctcca aggctcgaaa tgtatccagt ttggccttga
     3061 aactcttgga tgaaatcaat caggtttggc tatttgactg tggcgaagga actcaaaatc
     3121 aaattttgga aacgactatt cgtccacgta aggtcgcaaa aatcttcatc actcacctgc
     3181 acggagacca tatttttggc ttgcctggtt ttttgtctag ccgttctttc cagtctagtg
     3241 aggagcagac ggatattgat atttacggtc ctgttggcat ccgttccttt gttttggcaa
     3301 gtcttaaagt atcagggaca cgcctacctt atcgcattca ttttcatgag tttgatgttg
     3361 atacggtagg tcaggtccta gaaacggaca aattcacggt attcgctgaa aagctggacc
     3421 ataccattcc ttgtgtcggc tatcgtgtca tccagaaaga tttggaaggg acattggatg
     3481 cagaggctct gcgcgcggca ggtgtaccat ttggtcccct ctttggtaaa atcaaaaatg
     3541 gtcaaaacgt gacgctagaa gatgggactg aaattatcgc gagtgactat atttctcctc
     3601 ctcggcctgg taaggtagtg accattcttg gtgatacgcg caagtgttat gctagtgtcc
     3661 gtctggcagt caatgccgat gtgctggtgc atgaggcgac ttacggaaaa ggcgatgaga
     3721 agattgctcg caagcacggg cattcgacca atatggaagc cgctcaggtt gccaaggatg
     3781 ctggtgtcaa gcagctctta ctcaatcata tcagtccacg atttttatcc aaggatatta
     3841 gtcaattacg gaaagatgca agtactattt tcgagcaggt tcatattgtc aaagatttag
     3901 aggaaattga gctatgagaa ccattctaat cacaggtgct tctggtggct tggtacagga
     3961 aatggtgccc ttgctgaaag atgatttttt gattttacta ggtcgtgatg tggcgaaaat
     4021 cgagcaactc tacgcctacc atgacaaaaa ggctgtcttt gatgtggata tccgagatga
     4081 aatagctctg acggcatttt ttgatgaact ggatagtcag tttggtcaga ttgatatttt
     4141 agtcaataat gctggctatg ccatttacga tgattttgag aatttttcca gccagcaggt
     4201 gcaagctatg tttgacatca atacctttgc tctgatgacc ttatgtcgtt tagtaggtaa
     4261 acgaatgaag gcaagacgga gcgggcagat tatcaatatc atttccatgt caggcttgat
     4321 tgcgtcaagc aagtcctcgg tttattcggc gaccaagttt gcagctatgg gtttttccaa
     4381 taccattcgc ttggaattag cccagtatgg tgtgacagtt actacggtca atccaggtcc
     4441 aatcgcaacc agctttttcg accaagcaga tccagacgga agctatcaag agagcgtcaa
     4501 ggcttttctg ctccagccag actatgttgc caagaagatt gtggcggcta tgggaactag
     4561 gaagagagaa atcaacctgc cttggtcact agcagctgct cataaactct atactctctt
     4621 tccgagaata gcagactact tggccagtac agtatttaat ttaaaataag catagaaaaa
     4681 cgccgaaata aaactcggcg ttttcgtgta gactagctac gctcttttct acgtaaggcg
     4741 atactgccta gaagtaggct acctaatgcg atagcgatat agtttgtttt ttcacctgtt
     4801 tgaggtagtt gtttttcatc ggtagacttg gtggtatgta ctactgtagt attttttggt
     4861 gcttcatcca aaatattttt tggcatttca ggttgtggaa caagaatttc tacagctggt
     4921 aagtcttcta aggttgctaa ttgactacca aatagggcgt tggacaccca acggaagaag
     4981 tgaacagggt ggaccttgtt agttggatta cctgcataga taaagacagg ttggtcttga
     5041 taatttccag cgatggcgac aattttattg gctaatttgt catgaccagg ccaccaacct
     5101 gcaatataat aatctttatc agcgatttta acaagtatct taaatccttc aggaatgcct
     5161 tcaatccagt taccggagtt agaatagaaa agtccattca tggcgtagcc acttgttaat
     5221 ggatctttat catcaataat agctcgcatg agaccttcat agtcaccgcc atctgtaaac
     5281 tgttccgcat tgaaacctgc taagattcct aattcctcca gtttttgcat ggcgacacca
     5341 cctacgatga taattggttt cttaccaaat acactggcat caaattgatc agattcgaga
     5401 atgatagcat cagcctcatc tgcgctattg acaatttcaa agcccattcg ttctaccgca
     5461 agtgcagcat ttgcaagaat ggcaaagtcg cctgcccaac tataaaagtg agaaggagca
     5521 taaactttca tcggtttcaa ttcttgtcca ataggtttct tatagagggg ctcgccgtac
     5581 aaagcatagg tatctagtag gtggctaaat tggctagttt ccatgatgta gccatcgtct
     5641 gtaaggtaga ccttagcgcc tgatttgatg gcttgattaa tggcctgaac ggcgctttca
     5701 gaggtgtttg cgacgacata ataaggcgct ttgaaatcaa tttccgtagt acgtggagct
     5761 tttgtccatg tgatgctacc taatttgccg ctaaaggcgt tttcttcaaa tacagccttg
     5821 gcgctaaagc ctttcatatc tgggaagttg accaccaatt cagcatacat ggctccccag
     5881 gcagattcat cagaaccagc gtagaggaca tggttagcga atcctcgttt ggcttgagcc
     5941 atatcgacaa ctaggtcgcc cttgcggaag tttccaacat cttcagttaa ttccttgaca
     6001 acaaccccat tacgattgaa atattcaatc atcttaaatg cttcttgcat atcgttgtgt
     6061 ttatcgagcg tcataggaat cacatagtag tctgggaaga attttggctg gtcttttttg
     6121 acacgtccga caacagctcc gtctggtccg actaattcag cctctgcttt tggatcttct
     6181 accttattga caccgcgtga atagtatttg aggcgcattt ccataagagt gtctggcttg
     6241 gttgccatat tgtgaacacc gcccaaaaca gcaaagaatc ccgccttgaa tgattcttga
     6301 tttccttctg gaatttcaat cgtgtgtcca agaataccgt ggtacattgc atacaccgct
     6361 gtatagcctg agaaggaatc gtcccaacca tctccccagt ggactttagg gatggtgtag
     6421 cgttcatatt tagaatttgc aatacctgct cggcccattt catgagcttt ttccagcata
     6481 atatcggcta gtaaatcata ttcaaagttc gggtcatgtg gcggagtggc aggctcgatg
     6541 agaaatccag atacaaagcc atgaatatct aaaacagata ttgggttcca cttatggatt
     6601 tgacggacaa tggcttgtgt ttctggattc acttggaaac cagtatcacg gttagggtcc
     6661 aaaccattta ctagtgaacg caagttttta acatcgccat caggattttc tgtgaaattg
     6721 aacaagaaga taaatttatc taacaaatct gtcactttta aatgaagagt aacaggattt
     6781 ccatcggcat ctgtagatgg gaaggtgatg gtatcttttt gtgaaaattc tttgaatagg
     6841 ctagttacca catctatgcc gggttgttca tcagcatgag tgttgttgat gagaataggt
     6901 aatttatagt cgaaggttcc agcttgcaac tgtttcagca tctggtctgg ttgggtcagc
     6961 atgagtggtg ttgtttcagt aagatattta tcaatacttg cttgatcttt agccacaaca
     7021 gccattttaa tgtctctacc ttcagctgat tgaccaattg actcaatcct tactaggcgg
     7081 tcggtcgcag cattattttt cgtttcctca atctctgtca acatttcctc atgtgtacgg
     7141 taggcttcat aaggacggaa atgaagagtt tttgaaatta tcaggtttcc atcggcacta
     7201 gtaccttcca acagcatatc ttttataaaa tgtcgatagg tacggcgaat attactcggt
     7261 gtccgtttgc tcaaatcttc tccaaagaga gctgcgagct ggatattcaa atgaagttgg
     7321 ttatcctgtc tgctttcttc tactgtgata aatgtatcac ctgtgaaatc tccctctttc
     7381 aaattccagg ttttccattc ggaaataggc tttccatcta atgtccattc tattttttca
     7441 gtcgtatctg gaagtgtgac ggattctgtg atagtgactg cttccgatag atagacagtt
     7501 tttgtttcga gtgtaattgt atcaatagtc ggtacggcag ttttttcttc tgtagtattc
     7561 tgattatcat tattagctgt tctgagcgtt gtttcctcgg catttggctc ggaagatgtt
     7621 gtatcttctt ctgtggaaac aggtgtagga gaagtatctg ctatttcttc agtttgtttt
     7681 tctgtctcct tcccttctac aagattatct gtagcttcgc ttgtgctagt ttccatgata
     7741 ggagtctctt caggcagtgg agtcactgtt tcactagtag taggtggtat ctcctctgta
     7801 tttgcgaaga ccgttccctg agcgagagat gcagctaaaa gaactgttga ggcaagtagg
     7861 acttgattca acagtctttt cttatatgaa agtttcatac gaacttcctc cttttgataa
     7921 tgtgtatggg gtaataaatt aaaacgggtt atttcatgcc tatcttatca aaaaatatat
     7981 gtttttacaa tataaaatga atatgtttat atatttaaaa tattcagaaa tatcgaatca
     8041 tagagactat ttattttgag taggataatg aactaaaatc tgttataatg gtaaaaaaat
     8101 aagggagaga tatatggaaa aactttggaa aattatatac agtcggacat ttattgtcat
     8161 tagtttgatt attctaacca ttttccttat tctttggttg gtaggttcgg cagctaccta
     8221 tatgcctgct ttattgattg ttttgcaaat tttttcgatt tttgtagcta tttcaatcat
     8281 caatagaccg atgaatacca gttttaagtt aatctggatt atttttgtca ttggtattcc
     8341 gatttttggt gctctattct attttatttt gcagtccaac attgaaacta aacgttatcg
     8401 taaaaatttt cataagcaag cacaaagact tcgggagtat agtaagacgt ctgaaaaggt
     8461 catgaaggca ttggagcagg aagataagga gcaactgaaa ttagctcact tcatgagtga
     8521 gtacgttggc tacccaattc ataccaatac ggctgccgtc tatttttcaa caggtcagga
     8581 aaaatttgaa gctctactag aagaattgaa aaaagcagag cagtatattt tcatggagta
     8641 ctttattgtc gatatgggat atatgtggga ttctatcctt gacattttga aggaaaaggc
     8701 agcgcaaggg gtggaagttc gttttatgta tgatgggatg aattcactga ccaatcttcc
     8761 ctataattac tataaaacct tgagaaaata tgggataaaa gccaaagtat tttctcaaat
     8821 tatcccagcc ttatctacgg tgcaaaataa ccgtgaccat aggaaaattg cgattattga
     8881 tggaaaggtt gcctttaccg gtggtattaa tatcgcagat gaatacatca acaagaaagt
     8941 gcgttttggt tactggaaag acgcagcgat tatgattagg ggagaagctg ttgcaaactt
     9001 tacgttgatg ttccttcaaa tgtggaatta caatgaaaag acagagacag atgacctaaa
     9061 atacctcaaa acgcataaag atttagagac ggaaaccgtt gatgccgaag gtttcttcct
     9121 tccgtatggc gagaatccat ttgatggaga tgaggtagcc aaacgagtct gcctagacat
     9181 gattcagtcg gcaacggatt atatttatat catgacaccc tacctagtgt tggatgatga
     9241 aatgattgat aatttgactt atgcagcgaa gcgtggagtc gaggttcgca ttctgctacc
     9301 gcatatctat gataaaaaat cagcctattt ggctgctcgt actgattttc cgacatactt
     9361 ggaagcaggg attgaaatct ttgaattcca gcctggattt gtccattcca aagttgtttt
     9421 ggtcgatgat aagaaagcta ctgttggtac ggtgaatatg gattttcgct ctttttatct
     9481 taattttgaa tgcggtctct atatttacaa tcactcggca gttttggcag ctattaagga
     9541 tgactttact cattccttca aaaaatcaca gcaaattaac cttctaacct tccataaaac
     9601 gtactcttgg tataagcgtt tgggaggagc cctactacga attatttcgc cgttattata
     9661 aattgcaata ttcgttcttc atggagcaag ggatcgacat tctgtttcgg tcttaccttg
     9721 ctccattttt cttggaaaat gatataatag aaagatagtt tatactcgga aaagttacag
     9781 gttacttgtg attttgagta ttaaaggagt taataacgtg atcaaaccca attttgaatg
     9841 gcaattattg accggttttt ctgatgaaca atttatcaaa attgctaaaa aagaaggagt
     9901 ggacccggta gcggctaagt tgctgtatga acgtggcatc cattcggcgg aagaattgca
     9961 tactttctta caaccaagct tagaagacct tcacgatccc tatttactac atgatataga
    10021 caaggcggta gagcggattc gccgagcaat cgaagattac gaacaaattt tgatttatgg
    10081 agattatgac gcagacggca tgacctcggc atctattctg aaagaaactc tggaggaaat
    10141 gggggcagaa gtccaagttt atcttcctaa ccgtttcaca gatggctatg ggccgaatca
    10201 gtcagtttac aagtatttta tcgagcaaca ggggatttct cttattgtga cggtggacaa
    10261 tggcgtagcg ggtcatgaag cgattgccta tgcccaggaa atgggtgtcg atgttgtcgt
    10321 gacagaccac cattccatgc aggaaaccct tcccaatgcc tatgcgattg tacatccaga
    10381 gcatccagaa ggaaattatc ctttcaaaca tttggcgggc tgcggtgtag ccttcaaatt
    10441 ggcctgtgct cttcttgaaa ctgttcatgc agacttgctg gatttggtcg caattggcac
    10501 catcgctgat atggttagct taaccgatga gaatcgtgtc atggtcaaat atggtctctc
    10561 gcttctcaaa cagactgagc gagcaggttt gcaagagttg ataaagatag ctggtattga
    10621 catagacagt attgatgaag aaacagttgg tttccaactt gctccgaggt tgaatgccct
    10681 tggtcgactc gacgatccta atccagccat cgaattactg accggttttg atgacgaaga
    10741 ggcccatcaa attgccctca tgattgacag taaaaatgta gaacgcaaag acgtcgtcca
    10801 agcaatttac gatgaagcaa aaaccatgct ccgtcaggat agacctgttc aagttctggc
    10861 taaagaaggt tggaacccag gtgttttagg gattgtagca ggacgcctac tagaagaatt
    10921 gcagcaacct gttatcgtct tgtctattga ggatggtaag gcaaaggggt cggctcgttc
    10981 ggttgaagcg gttgacattt tcaaggccct taaagatcat caggacctat ttatcgcttt
    11041 tggtggtcat gctggtgcag caggtatgac cttggaagtt gataaacttg aagagcttgc
    11101 tctaaccttg acagactaca ttatcgaaaa taaattggat ttatccagca agtcttcgct
    11161 ggtcttagat gaagaattgg atttagagga attaacccta gatactctaa aatctttcga
    11221 gaagcttgcg ccttatggca tggataataa aaagcctgta ttctacatca gagactttca
    11281 ggtggaatca gcaaggacca tggggcagaa taatgcccat ttgaaactac gcattactaa
    11341 aggtgctgct ggatttgatg tccttgcttt tggtaagggc aatctagcct tggaattttc
    11401 acaggccaag ggcttagaac tagctgtcac cttatctgtc aatcaatgga atggcaatac
    11461 cagtcttcag ctcatgttgg ttgatgctcg ggtcaatggt gttcaacttt ataatattcg
    11521 tggaaaacaa catcctattc ctgcaggagt cccaattttg gacattgaaa atccagtagc
    11581 agataacaaa gcaattgtct tggctaactt gcctgaggac ctcagtagtc tgcgtagcta
    11641 ttttcaggaa agagaatttg aagccattta ttttaaaaac gaaattgcca aaccgtacta
    11701 tctagatggt tatggtagcc gagaacaatt cgctaaattg tataaaacca tttaccaatt
    11761 tgatgagttt gatgttcgct acaaactgaa agatttggct gtttacttaa aaattaagga
    11821 cagtctattg gttaaaatga ttcagatttt ccaagaatta gaatttgtca cgattacgga
    11881 tggggtcatg cgggtcaaca aagatgcaca gaagcgagag atttcagaaa gtcaaatata
    11941 tcaagaattg aaagaaacag ttatccaaca agagttgatg gcgcttggca ccgttcagga
    12001 aatttatgaa tggctatgtg gtcgcgtttg atgacagtag aagctctggt tgttgttgga
    12061 gtgattggaa cgcttctcta cacttattgg tttatcaggc aaaaaggttt gttgaaaaat
    12121 cttgaacaga taaccgaaat aaagcacgca ctgattgaat tacggcgagt aggatggtca
    12181 gaaagagcta tcaaaaaggt tttcctgaaa caactgttgc ctctaaaaca agaagacatc
    12241 ccagcatttg ttcaaaattt cataaaagaa gctactattt ttgcctcaac tagcttttat
    12301 cagttgataa gagttgacag tcgctcttta agccaagaga aagcgacggc tttattggag
    12361 caatgtatga atatgttaga ttttcctgag gaattaagtc atgggatatt acctgaactt
    12421 ttgcagaaga tggatgtgaa ttgtcctcca caccatccgt tttgggggga ctttgctaag
    12481 ctagttgata aggcttttcc agttcgggaa ttagaagtca aacggccgtt aaacagacag
    12541 gtccatcagc tgcgctacct tatttcctat cagcaggctt tttgggtgcg tcagcagttt
    12601 ggaaaaggaa atacagattg gcaggctctg atagcctatt tacgtagcct acctcgatgg
    12661 tcttaccgct tacgagaatc tgcccgcctg cacaataaac aactgttcgg caagaaaaat
    12721 cagaagactt tgccagtcaa tatgaagatt ttgattcatt ttcacagcga atttatccta
    12781 aatcaagatg gacaatttgc cttgatttta gaagaacgac ctcatgtcaa tggcgtggta
    12841 aacggggctt cctttaatta tgccagagct aataataagc gtcatagaca acttgatatg
    12901 gctccagttg gtaggcagga tcccgttttt cggaaagaat tgctacgctc aaagatggga
    12961 gtctacttat cgcctactcg ctttcgtcgc taccaaaaag gaagaaatga ggttggctgg
    13021 gagcagtctt actttaatca gcaaggaagc ttttcctatg gtggacatag tagggcagct
    13081 tgtgtggcga atttgaggag acgatttgct aaagatatag gtctgaaatg taccaaaaaa
    13141 caatttcatg gtataatgaa gagtaaaaat tatttttaaa aagagagaga caaatgaact
    13201 taaaagatta catcgcaaca attcctaact atccaaaaga aggtatcgaa ttccgtgaca
    13261 ttagcccttt gatggcagat ggaaatgctt atagctatgc agtacgtgaa atcgttcagt
    13321 atgcgacaga taagcaaatc gatatgattg ttgggccaga ggcgcgtggt ttcatcgttg
    13381 gatgtccagt tgcctttgaa ttgggaatcg gttttgcacc agttcgtaag ccaggtaagt
    13441 taccgcgtga ggttatctca gctgactatg aaaaagaata tggtgtagat acattgacga
    13501 tgcatgcaga cgcaatcaaa ccaggacaac gtgtcttgat tgtcgatgac ttgttggcga
    13561 ctggtggtac tgtaaaagca acgatcgaaa tgattgaaaa gcttggcggt atcgttgctg
    13621 gctgtgcctt cttgattgag ctagatgatt tgaaaggccg cgaagcaatc ggtgattacg
    13681 actacaaggt tttgatgcac tattaatcta aggttatagc caaaacttat aactggtcct
    13741 atttttattc taattgaatt gcatagcaac ctgtcttata ataaatataa gaaaattggg
    13801 aggttgctta tgccaattaa aattgaaaaa tcattaccag cagttgaaat tttgagaaaa
    13861 gagaatattt ttgtgatgga tagtgaccga gctagtcatc aggacattcg tcctatcaaa
    13921 atccttattc tcaatctcat gccacagaag atagtgacgg agactcagtt gctccgtctt
    13981 ttggctaaca ctcctttaca gctagaggtt gaatttctct acatggctag tcacgagtcc
    14041 aaaaatacac actcggacca tttgaagcag ttttataaga cttttgagca ggtcagggat
    14101 agctattttg atgggctcat cgtgacagga gcaccagttg aaaatttacc ttttgaggaa
    14161 gttgattact ggcaagaact tactcaagtt tttgattggt caaaaacaca tgtttattca
    14221 acattgcaca tttgttgggg tgcacaggca ggtttgtatg cacgctatgg tgtacccaaa
    14281 cacagtatgt ctcgaaaact atcaggcgta tattgtcaag aagtgactaa tccaactagc
    14341 cctcttatgc gtggatttga cgatgaattt cgttcaccac actcccgtta tacggaagta
    14401 agggaggtag atattgccca tctgagtggg ttgacgattt tatcacaagg tccagaagtt
    14461 ggtctatcca tcttagccag caaggattta agagaaattt atagttttgg acatttagag
    14521 tatgataggg atacactagc taaggaatac caacgtgatt gtatagctgg aaaaaatccc
    14581 catttaccgg aaaattattt caaagaagat gaccctacaa gcaaaccatc tctctcttgg
    14641 aatttaccag cagcacaatt ctttaccaac tgggtgaatt atgctgtcta tcaagaaact
    14701 ccatacgact ggcatatctt tgaacaatca gcccagtcag ctagtcttta aagaggaagt
    14761 atgaactatt cacagcaatt tcgtcaggga catttggtcc tgccagcagc aatattattc
    14821 cactatcaag agctttttcc gtcggcagat gattttttga tttggcagtt tttcttatat
    14881 caaaattctt cagctatcga atcattagcg cctagtgaga ttgctcaagc tactggtaaa
    14941 acagttgctc aggtcaatca agctattgaa aatctccaag atgctggact cttagaattt
    15001 aagacaatca gtattgctgg tgaaattgaa atgatattcg atgcacttcc tgcttttgaa
    15061 aaattggatg ttctgttaac tccaaaacag gcagttgaga ttgtgcaacc agagaatgat
    15121 ttgaagaccc tggtgggtga ttttgaacgt gaattgggcc gctttttatc gccgtttgaa
    15181 attgaagatt tgcagaagac tattgaggat gacaaaactt cgattgattt ggttcgtgca
    15241 gccttgaaag aagctgtttt taacaacaaa acaaattgga aatacatcca agctattcta
    15301 cgaaactggc gccgtgaggg aattactaca gttgcgcaag tagaagcgaa aaatgcagaa
    15361 agagaaatcc agactcctaa gaatgtgact gtttcaagtg actttcttga tgcaatggat
    15421 ctctggaaag attgatatgg aaacaaaatt atctaaaagg ctggaaacag tcgcaagttt
    15481 tgtcccacaa ggggcacgtc tagttgatgt agggagtgac catgcttatc tccctctttt
    15541 tttggtagag caggggcgta ttgattttgc cattgcgggg gaagtcgttc aaggtcccta
    15601 tcagtcagcg cttcagaatg tagagcaggc gggacaaaca gaaaaaattt tagtccgttt
    15661 ggcaaatggc ttaggtgcat ttgagacgtc tgaccagatg actgccgtga ccatagcagg
    15721 tatgggggga cgcttgattg cggaaatctt agaagcaggt aaagaaaagc ttgcgactat
    15781 tgaacgtttg atactccagc caaataatcg tgaagatgat gtgcggcgat ggttggaaaa
    15841 aaatggtttt agattggttt ctgaaaagat tctggaagaa aatggcaagt tatatgaagt
    15901 cctcgttgca gaatcaggac agatgagatt atcagaagtt gaacatcgtt ttggtcccta
    15961 tctactagag gaggcctcac cagttttcgt caaaaaatgg agaagagaac ttgaaaaatt
    16021 aagttctgct ttggaacaag ttccatctga acgccaaggt gaccgctttg ccatttccca
    16081 aaagatccaa caaattcagg aggtagtcca tgttagctag tcaggttatt gaacgctatc
    16141 aagccttttg tcccccttct ttggctatgg aaggcgatgt caaagggctg caaatcggta
    16201 cccttaataa agagattcaa cgtgtcatgg tggctctgga tattcgtgag acaacagtgg
    16261 cagaggcgat tgataaaaag gtagatttga ttatagtcaa gcacgctccg atttttcgtc
    16321 caataaatga tttggtggct gacaatccgc aaactaaaat gtatcttgat ttgattaagc
    16381 atgatattgc agtctatgtt agtcatacag atattgatgt ggttgagggt ggtctcaacg
    16441 actggttctg tgaactatta gaaattcaag atactaccta cttgattgaa actgccgagg
    16501 ggcaggggct tggccgtgtg gggacaatag cagagcagac tttggaagaa ttggctttga
    16561 aagtcaagtc tgtctttgat ctagatgctg tccgtctagt gacctatgtg caccaagcca
    16621 agcagtatgt cagccgtgta gccatctgtg gaggcagtgg tgggtcttac taccatgagg
    16681 ctcttgctaa gggggcagat gtttacatca cgggcgatat ttactaccat actgggcagg
    16741 acatgctgac tcagggcttg ctggctattg atccaggcca tcatatcgaa gcattattta
    16801 tcaagaaaat tgctgaattg ttggaaatat ggaaggcaaa agaaggttgg gatgtcgaaa
    16861 ttctaccttc aactgtttca accaatccgt ttagacattt gtgataaatt aatcagcact
    16921 tgattgtgga aagaccaaga cgacatt
//
LOCUS       DASFQD010000045        16434 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.045, whole genome shotgun sequence.
ACCESSION   DASFQD010000045 DASFQD010000000
VERSION     DASFQD010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 16434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16434
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.045"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(72..305)
                     /locus_tag="U1021_001117"
     CDS             complement(72..305)
                     /locus_tag="U1021_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEM4711665.1"
                     /translation="MLASIIAGAIIGLIVGALTSSDDRRGCLGNIILGLAGSWIGQLL
                     FGDWGPQFAGMALVPSVFGAVLLVAIFSSSRRN"
     gene            complement(361..1602)
                     /locus_tag="U1021_001118"
     CDS             complement(361..1602)
                     /locus_tag="U1021_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HEM4711666.1"
                     /translation="MVLPNFKENLAKYAKLLVSTGINVQPGHTVQLTIGVEQAELARL
                     IVKEAYAHGAAEVLVNWLDDVIARERLVNVDVELLEQVHPQRVTEMNYLLERKASRLV
                     VLSEDPGAYDGVDPEKLSRNARALSQALNPMRQASQANKISWTLGAASGLEWAKKVFP
                     NAASDEEAVDLLWDQIFKTCRIYEEDPIKAWEEHEARLVAKAKVLNDEQFVKLHYTAP
                     GTDLVLGMPKNHLWEAAGSVNAQGEHFIANMPTEEVFTAPDYRVADGYVTSTKPLSYN
                     GNIIEGIKVTFKDGEIVDVTAEKGDEVMKKLVFDNAGARGLGEVALVPDKSPISQSGV
                     TFFNTLFDENASNHLAIGQAYAFSIEGGTEMSQEELKEAGLNRSDVHVDFMIGSNKMN
                     IDGIREDGTRVPIFRDGEWAI"
     gene            complement(1819..2421)
                     /locus_tag="U1021_001119"
     CDS             complement(1819..2421)
                     /locus_tag="U1021_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012997947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEM4711667.1"
                     /translation="MSNFAKLQETRRTIYALGKELPVSNEEVVALVEKAMKEAPSAFN
                     SQSSRAVVLFGAESEAFWNEIAYSELEKVTPAEAFEGTKGRLASFAAGAGTILFFEDQ
                     DVVKGLQESFPLYAENFPIWSEQAHGINLYAVWLAFAEKNIGMNVQHYNPLVDARVAE
                     KYGIPANWKLRAQAPFGSIVAPAGEKDYMADSDRVKVFGN"
     gene            complement(2567..6958)
                     /locus_tag="U1021_001120"
     CDS             complement(2567..6958)
                     /locus_tag="U1021_001120"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PolC-type DNA polymerase III"
                     /protein_id="HEM4711668.1"
                     /translation="MSDKFQLLLQQIGMPLDARQSGAFSTATIEKVVLHKVSKLWEFT
                     FRFETPLPLMDYQLFKARLATEFEKVGNKIQFSIVSDAEAFEAGLVEAYYPEAFTEDL
                     CQSAGFKALFQPLEVAYRDGVLWIKGPETIDTDHFRKNHLPNLVEQYKRFGFGNLAVD
                     IQVCQEMTQQQAEIFHAQNEEIYQQANEENLAALEQLAQMAPPPEAAQPFVPEYKKNR
                     PAKVNIEKAEITPMIEVDSEENRIVFEGLVFEVEQKTTKTGRVIINFKMTDYTSSFTL
                     QKWAKNEEEAQKFDMVKKGNWLRVRGNVETNNFTRDLTMNVQEVQEVKKEIRKDLMPE
                     GEKRVEFHAHTNMSTMDALPAVEDLVARAAAWGHKAVAITDHGNVQSFPHGYHAARKA
                     GIKPLFGMEANIVEDSVPIAYNEADVVLSDATYVVFDVETTGLSAVNNALIQIAASKM
                     HKGNIIAEFDEFIDPGHPLSQFTTDLTGITDEHVRGSKPLEQVLREFQDFCQDSVMVA
                     HNATFDVGFMNVNYERAGLPIISQPVIDTLEFARNLYPDFKRHGLGPLTKRFGVALEH
                     HHMANYDAEATGRLLFIFLKDALEKHNLTNLNQLNTELIAEDSYKKARVKHATLYVIN
                     QVGLKNMFKLVSLSNTKYFEGVPRIPRTVLNAHREGLILGTACQEGEVFDDLLSKGID
                     EAVKTAAYYDFIEVMPPALYAPMIAKEQFKDKAEIEETIKQLIEVGRRAGLPVLATGN
                     VHYIDPEEEIYREIIVRALGQGAPINWTIGNGENAQPAPLPKAHFRTTSEMLDEFAFL
                     GESLAREIVITNPNAMLDRFEDVQVVKTDLYTPYIEKAEETVAELTYQKAFEIYGNPL
                     PDIIDLRIEKELTSILGNGFAVIYLASQMLVHRSNERGYLVGSRGSVGSSFVATMIGI
                     TEVNPMPPHYVCPNCQHSEFITDGSYGSGFDLPDKDCEKCGTKYKKDGQDIPFETFLG
                     FDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEENAFRAGTVGTVAAKTAYGFVRGYERD
                     YGKFYRDVEVERLAAGAAGVKRTTGQHPGGIIVFPDYMDVYDFTPVQYPADDVTASWQ
                     TTHFNFHDIDENVLKLDILGHDDPTMVRKLQDLSGIDPQTIPADDKGVMALFSGTEIL
                     GVIPEQIGTPTGMLGIPEFGTNFVRGMVEETKPTTFSELLQLSGLSHGTDVWLGNAQD
                     LIKAGIANLSTVIGCRDDIMVYLMHAGLPPKMAFNIMERVRKGLWLKISEEERNGYIQ
                     AMKDNKVPDWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHHPLYYYCAYFSIRAK
                     AFDLATMSGGLERVKAKMEEIALKKKNNEASNVEQDLYTTLELVNEMLERGFKFGKLD
                     LYKSHATDFLIEDDTLIPPFVAMDGLGENVAKQIVAARAEGEFLSKTELRKRGGLSGT
                     LVEKMDEMGILGKMPEDNQLSLFDDLF"
     gene            complement(7082..8071)
                     /gene="dhaQ"
                     /locus_tag="U1021_001121"
     CDS             complement(7082..8071)
                     /gene="dhaQ"
                     /locus_tag="U1021_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DhaKLM operon coactivator DhaQ"
                     /protein_id="HEM4711669.1"
                     /translation="MVFIRNRQATIIEDYLDGFCRTNPKVKKVKGLPIVLQKVQDDHL
                     VPIISGGGSGHEPAHIGFVGKGMLTAAVYGEIFTPPTAEEVLAAIRAVDKGKGVFLIV
                     KNFEADLVSFRKAIELARQEGIAVKYIVSHDDISVDTKNNFRMRHRGLAGTILLHKIL
                     GAAALTGYSLDELEQLGLSLATEIATIGFATKSAYLPNAALPLFDLEEGQISYGIGIH
                     GEEGYRTVRFESSEQLANEIVNKLKLKFRWKEGEDYILLVNNLGSMSEVEQGIFLNDI
                     CQFLELEGLQFSYIKTGKFMTSLDMGGISVTLCRVKDRKWLDFLEAPTEAAAW"
     gene            complement(8082..8627)
                     /gene="dhaS"
                     /locus_tag="U1021_001122"
     CDS             complement(8082..8627)
                     /gene="dhaS"
                     /locus_tag="U1021_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase transcriptional
                     activator DhaS"
                     /protein_id="HEM4711670.1"
                     /translation="MPTSLITKKRIAKAFKKQLSQKSFDKISVVDIMQEAGIRRQTFY
                     NHFLDKYELLDWIFETELQEQVTDNLTYISGIKLLDELLYYIESNQSFYRQLFEIKGQ
                     NDFVSYLEGYFMVLMEKIINEYQLQEGKMISQQDKHFLILYHANAWIGLIKEGLTQSP
                     CQIHSYWKQMVALVRESFVIL"
     gene            8775..9764
                     /gene="dhaK"
                     /locus_tag="U1021_001123"
     CDS             8775..9764
                     /gene="dhaK"
                     /locus_tag="U1021_001123"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003049938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HEM4711671.1"
                     /translation="MKKIINQPERVVDEMLKGLVFMHQDLVDRIDGFDVIIRKAEKTG
                     KVGIISGGGSGHEPSHAGFVGKGMLSAAVCGAVFTSPTPDQILEAIKAADEGAGVFMV
                     IKNYSGDIMNFEMAQELAEMEGIEVDSVVVDDDIAVENSLYTQGRRGVAGTILVHKIL
                     GHAAETGKSLAEIKELADRLVPQIKTIGLALSGATVPEVGKPGFVLEEDEFEYGVGIH
                     GEPGYKKEKLQPSAKLAEELVEKLAEGFDIQDGEHYGVLINGLGATPLMEQYVFANDV
                     AQLLAKKGVVVDYKKIGNYMTSIDMAGLSLTLIKLEDPSWIDALQAPVEVVAW"
     gene            9775..10350
                     /gene="dhaL"
                     /locus_tag="U1021_001124"
     CDS             9775..10350
                     /gene="dhaL"
                     /locus_tag="U1021_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit L"
                     /protein_id="HEM4711672.1"
                     /translation="MDAKQALLWMETFNKKIQEDKDYLSELDSPIGDGDHGGNMARGM
                     AAVMQELSEKDYETADQVFKVVAMQLLSKVGGASGPLYGSAFMGITKASQAGADLADT
                     LQAGLEMIQKRGKAELGEKTMVDVWIPVIAALRENQLTTEIIHKAVQGTKDIAATKGR
                     ASYVGERSIGHIDPGSFSSGLLFEAMLEAGL"
     gene            10347..10721
                     /locus_tag="U1021_001125"
     CDS             10347..10721
                     /locus_tag="U1021_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002960428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HEM4711673.1"
                     /translation="MTKVGILLVSHSKNLAQGIIDLVSEVAKDIPITYCGGLEDGSIG
                     TSFEIVQERVEANPADTLLAFFDLGSARMNMELAADFADKQILIQTVPVVEGCYTAAA
                     LLQAGADLETILEQLQELEIKK"
     gene            complement(10767..12620)
                     /locus_tag="U1021_001126"
     CDS             complement(10767..12620)
                     /locus_tag="U1021_001126"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000814078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEM4711674.1"
                     /translation="MKQSKMIIPTLREMPSDASVISHALMLRAGYVRQISAGIYSYLP
                     LANRVIEKAKNIMREELDKIDAIEFLAPALLSADIWRESGRYETYGDDLYKLKNREGS
                     DFILGPTHEETVTLLARDAVQSYKQLPLNIYQIQPKYRDEKRPRNGLLRGREFIMKDG
                     YSFHASYESLDQTYDDYKAAYEAIFTRAGLEFKAIIGDGGAMGGKDSQEFMAITPDRT
                     DLDRWVVLDKSVASFEEIPEDVLEAIKEELLAWSVSGEDTIAYSSESGYAANLEMATS
                     EYKPSTAVVVEEDLVKVATPGAKTIDEVAAFLNVAEEQTIKTMLFMADGEPVVALLVG
                     NDQVNDVKLKNHLGADFFDVASPADAEKVFGAGFSSLGPVGLPENIKIIADRKVQDVK
                     NAVVGANEDGFHYTGANAGRDFQVTEYVDIREVKEGEPSPDGHGVLNFARGIEIGHIF
                     KLGTRYSDSMNANILDENGRSMPIIMGCYGIGVSRLLSAVLEQQARLFVNKTPKGEYR
                     YAWGINFPKELAPFDVHLIPVNVKDEAAMELTQSIEASLVGAGYEVLTDDRNERVGVK
                     FSDSDLIGLPIRVTVGKKAADGIVEVKIKGTGDTVEVHVDQLLETLQILNK"
     gene            complement(12943..14202)
                     /gene="rseP"
                     /locus_tag="U1021_001127"
     CDS             complement(12943..14202)
                     /gene="rseP"
                     /locus_tag="U1021_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEM4711675.1"
                     /translation="MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKI
                     FAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKTGSPASLRLNEAGVVTRINLSGK
                     QLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
                     QNATVWGRLMTNFAGPMNNFILGILIFILLFFMQGGVANPSSNAVSIAEGGALQAAGV
                     VTGDKILSVNGNTTDSYTEVATIISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVD
                     GAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANFDVKQLGGPVAIYKV
                     SSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETES
                     YITLAGVAVMVVLMIVVTWNDIIRVFF"
     gene            complement(14212..15018)
                     /locus_tag="U1021_001128"
     CDS             complement(14212..15018)
                     /locus_tag="U1021_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEM4711676.1"
                     /translation="MTNDLQKRVIFGGIALAIFIPFLLAGGIAFQFFVGLLAIIATAE
                     LIKMHRLAPNSIEGVLAMLASLVLALPLQNYLTFLPMDGNYTAYAIVVFLLLGSTVFN
                     IGHYNYSDVVFPIASSFYVGIGFHSLILARMDGLNKVLFALCLVWATDIGAYLIGRQI
                     GRRKLLPKVSPNKTVKGFVGGILSAVVVAIIFLIVDKSLLAGYSFGRMLLLVVIFSTF
                     SQFGDLVESAIKRHFGVKDSGKIIPGHGGILDRFDGMIFVFPIMHFFGLF"
     gene            complement(15028..15783)
                     /locus_tag="U1021_001129"
     CDS             complement(15028..15783)
                     /locus_tag="U1021_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEM4711677.1"
                     /translation="MFKFNFKKKESIETAIEVPKHIAVIMDGNGRWAKKRMQPRIMGH
                     KAGMDALQKVTKTASDLGVKVLTVYAFSTENWSRPKKEVKFIMNLPVEFYDKYVPELH
                     ANNVKIQMIGDHSKLPVPTLNALYKAEQKTKSNTGLILNFALNYGGRDEVTRAVKAIA
                     QDVLDAKFNPGDIDEKLIADYLYTGTLSPTLRDPDLVIRTSGELRLSNFLPWQTAYSE
                     LYFTDIAWPDFDGEALKLAIKEYNRRHRRFGGV"
     gene            16015..16434
                     /locus_tag="U1021_001130"
                     /pseudo
     CDS             16015..16434
                     /locus_tag="U1021_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941577.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         4624 a         3978 c         3368 g         4464 t
ORIGIN      
        1 atacagcaat tcacgcaaat tcaaaacaaa taaaaccaaa cctcatccga agtttggttt
       61 cacagttcat tctaattccg tctggaactg ctaaaaattg ccaccagcaa tactgctcca
      121 aagactgacg gtaccagggc cataccagca aactgtggac cccaatcacc aaagagcaac
      181 tgtccaatcc atgaacctgc aagaccaagg ataatatttc caagacaacc acgacggtca
      241 tccgaagaag tcaaagctcc cacgatcaaa ccgataatcg cacctgcgat aatacttgct
      301 aacatagtac ttcctttcta ttgacaaaaa gactggtcgc ccagtcttat agcatcattt
      361 ttagattgcc cactcaccgt cacggaagat tggcacacga gtaccgtctt cacggatacc
      421 gtcaatgttc atcttgttag aaccaatcat gaagtccaca tggacatcag aacggttaag
      481 gcctgcttct ttgagctctt cttggctcat ttctgtacca ccttcgatag agaaggcata
      541 ggcttggcca atcgccaagt ggtttgacgc attttcatca aagagggtgt tgaagaaggt
      601 cacacctgat tgagaaattg ggctcttgtc tggcacaagg gcaacctcac cgagaccgcg
      661 agcaccagca ttatcaaaga ccaatttctt catgacttca tcgccttttt cagccgttac
      721 atccacgatt tcaccgtctt tgaaggttac tttgatgcct tcgatgatgt taccgttgta
      781 gctgagtggt tttgtagacg ttacataacc gtctgccaca cggtagtcag gtgctgtgaa
      841 gacctcttct gttggcatgt tggcaataaa gtgttcacct tgggcattga ccgaaccagc
      901 cgcttcccac aagtgattct tcggcatacc gagaacgagg tcagttcctg gtgctgtgta
      961 gtgcaatttg acaaactgct cgtcgttgag gaccttagcc ttagccacca agcgtgcttc
     1021 atgctcttcc caagccttga ttggatcttc ctcgtagata cggcaagtct tgaagatttg
     1081 gtcccaaagg aggtccactg cctcttcgtc agacgctgca tttgggaaga cttttttagc
     1141 ccattccaaa ccagaggctg caccgagtgt ccagctgatt ttgttagctt gggatgcttg
     1201 ccgcattggg ttcaaagcct ggctgagtgc acgagcgttg cgagacaatt tctctggatc
     1261 cacaccgtcg taagcacctg gatcttctga caaaacaacc aaacggctag ccttacgctc
     1321 caagaggtag ttcatttcag taacgcgttg tggatgaact tgttccaaga gttccacatc
     1381 tacattgacc aaacgttcac gcgcaatcac atcgtccaac cagttgacca agacttcagc
     1441 cgcaccgtgg gcgtaagctt ctttgacaat caagcgtgcc aactcagcct gctccacacc
     1501 gattgtcaat tgaaccgtgt gaccaggttg gacattgata cctgttgaaa ccaagagttt
     1561 agcatattta gcgagatttt ctttaaaatt tggtaatacc atctttttct cctttgtact
     1621 ttgaaatacc ctattattgt atcatatttt aagctagaca gataaaaaaa cttcctgctg
     1681 atacaggaag ttagctctgg aagatagttg aagcttggag atgaaacgtc aatactctct
     1741 tatttctagg cattgacttg aactgtttca atcaggcaag gtgagttaac gacgtaataa
     1801 agcaaactgt aaactttact agttaccaaa aacctttaca cggtcagaat ccgccatgta
     1861 atctttttcc cctgctggag ctacgatgct accgaatggt gcttgggcac gaagtttcca
     1921 gttagctggg ataccgtatt tttcagccac tcgtgcatca accaatgggt tgtagtgttg
     1981 tacgttcata ccgatatttt tctcagcgaa agccaaccat actgcgtaca agttgatacc
     2041 gtgagcttgt tcagaccaga ttgggaagtt ttcagcgtaa agcgggaagc tctcttgcaa
     2101 gcctttgacc acgtcttgat cttcgaagaa caagatagta cctgcacctg ctgcaaagct
     2161 agccaaacga ccttttgtgc cttcaaacgc ttctgcaggc gttacttttt ccaattcgct
     2221 gtaggcaatt tcgttccaga aagcttctga ctccgcacca aaaagtacta ctgcacggct
     2281 tgattgtgag ttgaaagctg atggagcttc tttcatggct ttctcaacaa gtgctaccac
     2341 ttcttcattt gatactggca attctttacc aagtgcgtag attgtacggc gagtttcttg
     2401 aagttttgca aagtttgaca taggatttcc tcttttctta ttgttactac atagtagttt
     2461 ttatcactat gtagagatta tatacctatc aaaaacatta gtcaagagtt ttgacttctt
     2521 tttataaaaa aaaattcact gcttccaaaa gaaacagtga acaagtttaa aacaaatcat
     2581 caaagagact gagctggttg tcctctggca ttttaccgag gatgcccatt tcatccattt
     2641 tttcgaccag tgtacctgac aatcctccac gcttacggag ttctgtcttg gagaggaatt
     2701 ctccttcagc acgcgccgcc acaatctgct tagcaacgtt ctctcccagg ccatccatgg
     2761 caacaaatgg tgggatgagg gtatcatctt caatcaagaa atcggtcgca tgggacttgt
     2821 aaaggtccaa tttcccgaac ttgaagccac gttccagcat ttcatttacc aactcaagtg
     2881 tggtatagag atcctgctca acgttcgaag cttcattgtt tttcttcttg agggcgattt
     2941 cttccatctt agccttgact cgttccaagc caccggacat ggttgccaaa tcaaatgcct
     3001 tggcccgaat agagaaataa gcgcaatagt agtaaagtgg gtgatgaacc ttgaaatagg
     3061 caacccgcaa ggccatcata acgtaggcag ccgcgtgggc tttagggaac atatacttga
     3121 tttttccaca ggattcgatg taccagtctg gcaccttgtt atccttcatg gcttgaatgt
     3181 agccatttcg ctcttcctca gaaatcttga gccacaagcc cttccgcacc cgctccatga
     3241 tattaaaggc catcttaggt ggcaaacctg cgtgcatgag gtaaaccatg atgtcatccc
     3301 gacaaccgat aacagtagat agattagcaa ttcctgcctt aatcaagtcc tgggcattgc
     3361 ccaaccaaac gtctgtaccg tgcgatagac cagataactg caagagttcc gaaaaagtgg
     3421 tcggtttggt ttcctccacc atcccccgta caaagttggt tccaaattca ggaatgccca
     3481 gcatacctgt cggtgtccca atctgctctg ggataacacc cagaatttcc gtaccagaaa
     3541 aaagagccat aaccccctta tcatcagcag gaatagtttg cggatcgatg cctgacaagt
     3601 cctgcaactt ccgaaccatg gttggatcat cgtgtcccag aatatcgagt ttcaagacgt
     3661 tttcatcaat atcgtggaag ttaaagtggg tggtctgcca gctggctgtc acatcatcgg
     3721 caggatactg aacaggggta aagtcataga catccatgta gtcagggaat acgataattc
     3781 ctcctgggtg ctgaccagtc gtccgtttga caccagcagc accagcagcc aggcgttcta
     3841 cttccacatc tctatagaat ttgccataat cccgctcata gcctcggaca aaaccatagg
     3901 ccgtcttggc cgccaccgta ccaaccgttc ctgcacggaa ggcattttct tcaccgaaaa
     3961 tatcccgaac atccaaatgg gcagacggtt ggtcatcccc tgagaagttc aagtcaatat
     4021 cgggaacctt gtctccatcg aaaccaagga aggtctcgaa aggaatgtcc tgtccatctt
     4081 ttttatactt ggtcccacac ttttcacaat ccttgtctgg caggtcaaaa cctgaaccat
     4141 aggaaccatc tgtgataaat tcactgtgtt gacaatttgg acagacatag tgaggaggca
     4201 tagggtttac ttcggtaatc ccaatcatgg tcgcaacgaa actggagccg acagaccccc
     4261 gtgaacccac caggtagccc cgctcgttgg aacggtgcac caacatctgc gatgccaggt
     4321 aaatcacggc gaatccatta cccagaatgg acgtcaattc cttctcaatc cgcaggtcga
     4381 taatatctgg aagaggattg ccataaattt caaaggcttt ctgataggtc aattccgcaa
     4441 ccgtttcctc ggccttctca atataaggcg tataaaggtc ggtcttaacc acctgaacat
     4501 cttcaaaccg gtccagcatg gcattgggat tggtaatgac aatctcacga gccagacttt
     4561 ctcccaagaa tgcaaactcg tccaacatct cgctggtcgt tctaaagtgg gcttttggca
     4621 gtggtgctgg ctgagcgttc tcaccatttc cgatggtcca gttaatcggt gccccttgac
     4681 ctagagcacg aacaatgatt tcccgataga tttcctcttc ggggtcaatg tagtgaacat
     4741 ttcctgtcgc cagaacaggc agacctgccc tacgtcctac ctcaatcaac tgcttaatag
     4801 tctcttcaat ctctgccttg tccttaaact gctccttggc aatcatggga gcatagaggg
     4861 ccggtggcat gacttcgata aaatcataat aggctgccgt tttaaccgct tcatctatcc
     4921 ctttggagag caagtcatcg aagacctcac cctcttgaca ggctgttccc aatattaaac
     4981 cttcacgatg ggcattgaga acggtccgtg gaatacgtgg aactccttca aaatacttgg
     5041 tattggaaag agagaccagt ttgaacatat ttttcaaacc aacctgatta atcacataga
     5101 gcgtggcatg cttgacacga gccttcttat aggaatcctc cgcaatcagc tccgtattta
     5161 gctggttgag attggtcaaa ttgtgcttct ccaaggcatc ttttaggaag atgaagagca
     5221 ggcgccctgt cgcctccgca tcgtagttag ccatgtggtg gtgttcaaga gcaacaccaa
     5281 accgcttggt gagaggacct aaaccatgac gcttaaagtc gggataaagg ttacgagcaa
     5341 attccaaggt atcaatgaca ggctggctaa taataggtaa gcctgctcgt tcatagttga
     5401 cattcataaa gccaacgtca aaggtcgcgt tgtgggcaac catgacggaa tcttgacaga
     5461 aatcttgaaa ctcacgcaga acttgttcta gaggtttaga accacgcaca tgctcatctg
     5521 tgattcctgt cagatctgtt gtaaattgac tgagcggatg acccggatcg ataaactcat
     5581 caaattctgc aatgatatta cccttgtgca tcttagacgc cgcaatctga atcagggcat
     5641 tgttaactgc agagagacct gttgtttcca cgtcaaagac cacataggtg gcatcagaca
     5701 ggactacatc tgcttcgttg taagcaatag gcacagagtc ctcgacaata ttagcctcca
     5761 tcccgaagag cggcttaatc ccagctttac gggcagcatg atagccatgg gggaaggatt
     5821 gaacattgcc gtggtcggta atcgccaccg ccttgtgtcc ccaggctgct gcacgcgcca
     5881 ccaagtcctc aacggcaggc agggcatcca tagtagacat gttggtatgg gcatgaaact
     5941 caacccgctt ctcaccctca ggcataaggt ccttacgaat ttccttcttg acctcctgga
     6001 cttcctgtac gttcatagtc aaatcacgag tgaaattatt ggtctccaca ttgcctcgca
     6061 cccgcaacca gttgcccttt ttgaccatat caaacttctg ggcctcttcc tcattcttag
     6121 cccacttctg caaggtaaag gacgaagtat agtcggtcat cttaaagttg ataatgactc
     6181 gccccgtctt ggtcgtcttc tgctcgacct caaagaccag tccctcaaag acaatccgat
     6241 tctcctcgct atccacctca atcataggcg taatctcagc cttttcgata ttgaccttgg
     6301 caggacgatt tttcttatat tctgggacaa atggctgagc tgcctctggt ggtggcgcca
     6361 tttgagccag ttgttcaagg gccgccaagt tttcttcatt agcctgctgg taaatttctt
     6421 cattttgcgc atggaaaatc tccgcttgtt gctgcgtcat ttcctgacag acttggatgt
     6481 ccaccgcaag attaccaaaa ccaaatcgct tgtattgctc cacaagattt ggcagatgat
     6541 tcttccgaaa atgatctgtg tcaatggttt caggaccttt tatccacaaa acaccatctc
     6601 tataagccac ctctaatggc tgaaaaagag ccttgaagcc tgcactctgg cacaaatctt
     6661 ccgtaaaagc ttctggataa tatgcttcta ccaaaccagc ttcaaaagcc tccgcatcgc
     6721 tgacaataga aaattgaatc ttattgccca ccttttcaaa ctccgtcgcc aaacgagcct
     6781 tgaagagttg atagtccatg agcggcaagg gggtttcaaa acggaaggta aattcccaaa
     6841 gtttactgac cttgtgcaag actactttct caatcgttgc agtcgaaaaa gcccctgatt
     6901 gtcgtgcatc aagaggcatt ccgatttgtt gtagcaagag ttgaaactta tctgacatac
     6961 ttatttcctt tgtagttcgt tagaaacatt ttaccataaa tgaggtattt tttcctgagt
     7021 caggaagaaa aaactctcag gtcatttcct gagagatctg atttctatag aaattagtag
     7081 cctaccaagc cgcagcttct gtaggcgcct ctaaaaaatc cagccatttt cgatccttaa
     7141 cacgacagag ggtgacagaa attcctccca tatcaagact ggtcataaat ttacctgttt
     7201 ttatatagga aaactgtaaa ccttctagct ctagaaattg gcaaatgtca ttcaaaaaga
     7261 ttccttgctc aacctcagac atagatccaa gattattgac cagaagaata tagtcttccc
     7321 cctccttcca gcggaatttt aattttaatt tgttcacaat ttcgttggct aactgctcag
     7381 aggattcaaa acgaacggtc cgatagcctt cttctccatg gataccgatg ccgtaagata
     7441 tttgtccctc ctccaaatca aacaaaggca gggcagcatt gggcaaatag gccgacttgg
     7501 ttgcaaaacc gatggtcgca atctctgttg ccagagacag tcccagctgt tccaattcat
     7561 ctaggctata gccagtaagg gcagcagctc ctaatatctt atgaagtaga atggtccctg
     7621 caagccccct atgccgcata cggaaattat tcttagtatc gaccgaaata tcgtcatggg
     7681 atacgatgta cttgactgca attccctcct gccgagccaa ttcgatggct tttctaaaag
     7741 agacaaggtc tgcctcaaag ttttttacaa ttagaaaaac tcccttaccc ttatctactg
     7801 cacgaatggc tgccaatact tcttcagcgg ttgggggcgt aaatatttca ccatatactg
     7861 ctgcagtcag catacccttt ccgacaaatc caatatgtgc cggttcatgc cccgatccac
     7921 cacctgaaat aattggaact aaatggtcat cctgcacttt ctgaagcaca atcggaagtc
     7981 ccttcacttt cttcacttta ggattggttc gacagaaacc atccaaataa tcttcaataa
     8041 ttgttgcctg tctatttcta ataaacacca tatattaact cctacaaaat cacaaacgac
     8101 tcgcgaacaa gagccaccat ttgcttccaa taactgtgaa tctgacaagg tgactgtgtc
     8161 agtccttcct ttatcagtcc aatccaagca ttagcatgat agagaatcaa aaaatgctta
     8221 tcctgttggg aaatcatttt accctcctgg agctggtact cgttgataat tttctccatc
     8281 aaaaccataa agtagccttc taaatagctg acaaaatcat tttgcccctt aatctcaaag
     8341 agttgcctat agaaagattg gttactctcg atgtagtaca aaagctcatc cagaagcttg
     8401 attccactaa tataggtcag attgtcagtt acctgctcct gcaattctgt ctcaaatatc
     8461 cagtccagca actcatactt gtctaaaaaa tggttgtaaa aggtttgacg acgaatccct
     8521 gcttcctgca tgatgtcgac aactgagatt ttatcaaagg atttttggga tagctgtttt
     8581 ttaaaagcct ttgcaatcct tttctttgta atcaacgagg ttggcatatg tcacttcctt
     8641 tcgcttcctc tttattatac cctatcatgc ttttctttgg aacaaaaggg acacattgga
     8701 caatctgtcc cttccttttt tcttttggac aatgtagaat aaaagcgcaa acaaaaaaac
     8761 aaaggagttt tctcatgaaa aaaattatca atcaacctga acgtgtcgtt gatgaaatgt
     8821 taaaaggact tgtctttatg caccaagatc ttgtcgatcg tatcgatgga tttgatgtga
     8881 ttatccgcaa ggctgaaaaa actggtaaag tcggcatcat ctcaggaggt ggctctggtc
     8941 acgaaccttc tcatgcaggc tttgtcggca agggcatgtt gtccgccgct gtatgtggcg
     9001 cagtatttac ctcaccaaca ccagaccaaa tcttggaagc catcaaggct gctgacgagg
     9061 gagctggcgt ctttatggtc atcaaaaact actctggcga catcatgaac tttgagatgg
     9121 cgcaagaatt ggcggaaatg gagggcattg aagtggacag tgtcgttgtg gacgatgaca
     9181 tcgctgtgga aaacagcctc tatacccaag gacgtcgtgg tgtagcaggt accatccttg
     9241 tccacaagat tctcggtcac gctgcagaaa cgggcaaatc gctggctgag attaaggaac
     9301 tggctgaccg tctcgtccca caaatcaaga ctatcggctt agccctatca ggtgctacgg
     9361 taccagaagt gggcaaacca ggcttcgtcc ttgaagagga tgaatttgaa tacggtgtcg
     9421 gtatccatgg tgaacctggc tataagaaag aaaaactcca accatctgct aaattggctg
     9481 aagaattggt tgagaaattg gcagaaggct ttgatattca agatggcgag cactatggtg
     9541 tccttatcaa cggtctcggc gcaacccctc tcatggaaca atatgtcttt gccaacgacg
     9601 ttgctcaatt gctggctaaa aaaggtgtgg tcgttgacta caagaaaatc ggtaactaca
     9661 tgacatcgat tgatatggct ggactgtcat tgaccttaat caaactagaa gacccaagct
     9721 ggattgacgc tttgcaggcc cctgttgaag tggtagcttg gtaggagaaa gactatggat
     9781 gcaaaacaag cactgctctg gatggagaca ttcaacaaaa aaattcaaga agacaaagat
     9841 tatttgagtg agctagattc tccaattgga gacggagatc acgggggcaa catggcgcga
     9901 ggaatggctg ccgtcatgca ggagctatct gagaaagact atgagactgc tgaccaagtc
     9961 tttaaggtgg ttgccatgca acttctcagc aaggttggcg gtgcttccgg tcctctctac
    10021 ggctctgcct ttatgggtat tactaaagcc agtcaagctg gcgctgattt ggcagatacg
    10081 cttcaagcag gtttggagat gatccaaaaa cgcggcaagg ctgaattggg cgagaaaacc
    10141 atggtagacg tttggattcc cgtcattgct gccctaagag aaaaccagct gacaacggaa
    10201 attatccata aagccgttca agggacaaag gatattgctg cgaccaaggg acgcgcgtcc
    10261 tatgttgggg aaaggtctat tggacacatt gatccaggct ctttctcatc tggacttctc
    10321 tttgaagcca tgttggaggc aggactatga caaaggttgg tatcttactc gtatcccatt
    10381 caaaaaattt agcccaggga atcatcgacc tagtatctga agtcgcaaaa gatattccca
    10441 tcacctactg tggcggacta gaagatggta gcatcggtac cagctttgaa atcgtacaag
    10501 agcgagttga agcaaaccct gctgataccc tccttgcctt tttcgaccta ggtagcgccc
    10561 gaatgaacat ggaacttgct gccgattttg cagacaaaca aattcttatc caaaccgtac
    10621 cagtcgtcga aggttgctat actgccgcag ctctcttaca ggctggagct gacttggaga
    10681 ctattcttga acaattacag gagcttgaaa tcaaaaaata aatacaaatt taaaagccga
    10741 ggtataaaaa cttcggcttt ttcttattac ttattcaaaa tctgcaaggt ttcaaggagt
    10801 tggtccacat ggacttctac agtatcacct gtgcccttga ttttcacttc gacgatgcca
    10861 tcagctgctt tcttaccaac agtcacacgg attggcaagc caatcaagtc actgtcagaa
    10921 aacttaacgc cgacacgctc attacggtcg tcagttaata cttcatagcc tgcaccaacc
    10981 aaacttgctt cgatagactg agtcaattcc atcgccgctt catctttgac attgactgga
    11041 atcaaatgca catcaaacgg agccaattct ttagggaagt tgatccccca agcgtaacgg
    11101 tattcgcctt ttggtgtctt gttgacaaag aggcgagcct gttgctcaag aacggctgat
    11161 aagagacggc taacaccgat accataacaa cccataataa tcggcataga acgaccattt
    11221 tcatccaaga tattggcatt catgctatct gaataacggg taccaagctt gaagatatga
    11281 ccaatctcga taccacgggc aaagttgaga accccgtgtc catctggaga cggttcgcct
    11341 tccttgactt cacgaatgtc cacatactca gtcacttgga aatcacgacc tgcattggca
    11401 cctgtgtagt ggaaaccatc ttcgttggca ccgacaacag catttttcac atcttgaacc
    11461 ttacggtctg caataatctt gatgttttct ggtaaaccaa ctgggccaag agaactaaag
    11521 cctgcaccga agactttctc tgcatcagct gggcttgcta catcaaagaa atctgcgcca
    11581 aggtggtttt tcaacttgac atcgttgacc tggtcattgc caacaagaag ggcaacaact
    11641 ggctcaccgt ctgccataaa gagcatggtt ttgatcgttt gctcttccgc aacattcaag
    11701 aaggcggcta cttcgtcgat ggttttagca cctggtgtag caactttaac caaatcttct
    11761 tcaaccacaa ctgctgtact cggtttgtac tcgctagttg ccatttctag gttggcagcg
    11821 taacctgatt cgctagagta ggcaatggtg tcttcaccag acacagacca tgccaagagt
    11881 tcttccttga ttgcttcaag aacatcctct gggatttctt caaaagaagc aacagacttg
    11941 tccaagacaa cccaacggtc caggtcagta cggtctggtg taatagccat aaactcctgg
    12001 ctatccttac cacccatggc accaccgtca ccgataatgg ccttgaactc caatcctgca
    12061 cgagtgaaga ttgcctcgta agccgccttg tagtcatcgt aggtctggtc caagctttca
    12121 tagctagcgt ggaagctgta gccatctttc atgataaact cgcgaccacg gagaagaccg
    12181 ttacgagggc gtttttcatc acggtatttt ggctggattt ggtagatgtt aagcggcaac
    12241 tgcttgtaag actggaccgc atcacgcgcc aatagcgtca ccgtttcttc gtgggttgga
    12301 cccaagataa agtcagaacc ctcacggttt ttgagcttgt agaggtcgtc accataggtt
    12361 tcataacgac ctgactcacg ccaaatatcc gcggacaaga gggctggtgc caaaaattca
    12421 atggcatcaa tcttatcaag ctcctcacgc atgatatttt ttgctttttc aatcacacgg
    12481 ttagccaaag gcaagtagct gtaaatacca gcagaaatct gacggacata gcccgcacgt
    12541 aacatcaaag cgtggctaat caccgacgca tccgaaggca tctcccgcaa agtagggata
    12601 atcattttag actgtttcat agttaagata taagtgcgtt aagaaaacga aacgaaaata
    12661 ggaaacctaa cgcagtgcct ttggcactag gcaggtttat ctttttcgta aagtttttag
    12721 cacgcattca attcctttcg tagtttactt gactggaaga caaagaatta acttttcaac
    12781 cccctcgctg acgctcgagt tcaaatctga aaactctctg ttcctttctt tttcgtattt
    12841 tttcagaaca tcctgcgttt agcacgcatt caattccttt cgtatttttc agaacatcct
    12901 gcgtagcacg cattcaattc ctttcataaa tttcaaatta tcttagaaga agactcttat
    12961 aatatcattc caagtgacta ctatcataag aaccaccata acggctacac ctgctagagt
    13021 gatataagat tccgtctctg gtttgagtgg ttttctgcga atggcttcca gaatattcat
    13081 aacaatctta ccaccatcca aggctggaat tggaatcaaa ttgaagattc caaggttaat
    13141 ggagagcgca gccatcagcc ccaacacaga gaccaaacca aattcagccg cttgagaact
    13201 tactttataa atagcaaccg gtccccccaa ctgcttaaca tcaaagtttg caattaggtt
    13261 cttcaaggct gttacaaccc taagagctgt cgctcccgct tcttggaaac caccgacaat
    13321 tttatcaacg aaaccagttt tcaaaatcgg tgaaatacca attcgatagg ccccatctac
    13381 ttgttcggca gtaacggaga catgacggtt tttcccatca tgctcaacaa ccaaatcaaa
    13441 gcttggggct gttgttgcat ctgtcgctgc tttgctaata atcgttgcaa cttctgtgta
    13501 gctatctgtc gtgttcccat tgaccgaaag aatcttgtcc cctgtgacaa cacccgcagc
    13561 ctgcaaagca ccaccttcag caatacttac tgcattgctt gatgggttgg caaccccgcc
    13621 ttgcatgaag aacaaaagaa taaatattag aattcctaaa ataaagttat tcatgggacc
    13681 cgcaaagttg gtcatcaacc gtccccagac tgtcgcattt tgatactgaa catcaagtgg
    13741 agcaatccga acttctgttc catcttcctc tacaatcgtg gcatcgtgat caaccttata
    13801 ggtcttgctt tcttccaaga ccaagcctgt gatttccaat ttttcctcga agtcaaaact
    13861 ggttacattc attggcaaac tgagactatc cagttgctta ccagataaat taatccgcgt
    13921 cactacacca gcttcattca gtctgaggct ggcaggacta cctgtcttaa tctctgtctt
    13981 atcttcaccc catccagcca ttcgaacata gccacctagg ggaaggatac ggatggtgta
    14041 aagtgtccca tccttacctg tatgagcgaa aattttggga cccatcccaa tcgcaaattc
    14101 cctcacaagg ataccagctt tcttggcaaa gtagaaatga ccaaattcat ggacaaccac
    14161 aatcacacca aatataaata taaatgctaa aattcccttc atagtacctc cttaaaataa
    14221 tccaaagaag tgcatgattg gaaagacaaa aatcatacca tcaaaacgat ccaggatacc
    14281 gccgtgtcct ggaataattt ttccagaatc cttcacacca aaatggcgtt taatagcact
    14341 ttctactaaa tctccgaatt gtgagaatgt cgagaaaatc acaaccaaca acaacatcct
    14401 gccaaatgaa tagcccgcta acaaggactt atcgacaatc aagaaaatga tagcaactac
    14461 caccgcagaa agaataccgc ctacaaagcc tttaaccgtt ttattcggtg aaaccttcgg
    14521 caataatttt ctccgaccaa tctgacgacc gattaagtaa gcaccaatgt ctgttgccca
    14581 gactaaacag agggcaaata agactttatt gagcccatcc atacgagcca gtatcaaact
    14641 atgaaagccg ataccaacat agaaacttga tgcaattgga aagactacat cggaatagtt
    14701 gtaatggccg atattaaaaa ccgtcgaacc aagcagtaaa aatactacaa tggcgtaggc
    14761 tgtgtaattt ccatccatcg gtaaaaatgt cagataattc tggagcggaa gagccaagac
    14821 taaactggcc aacatagcta agacaccctc gatagaattg ggtgctaggc ggtgcatttt
    14881 aatcaattca gccgtagcaa tgatggctaa caggcctaca aaaaattgaa atgctatccc
    14941 accagccaac aaaaagggaa tgaaaatagc tagagcaatg ccaccaaata tcactcgttt
    15001 ctgtaaatcg tttgtcatac cttctcctta tacaccgcca aaacgtctgt ggcgacggtt
    15061 gtattcttta atcgctaatt taagtgcttc tccatcaaaa tcaggccaag caatatctgt
    15121 aaagtacagc tcactgtagg ctgtttgcca cggcaggaag ttgctaagac gaagttcacc
    15181 acttgtacgg ataactagat cgggatcgcg taacgttggt gataaggttc ctgtatagag
    15241 gtaatccgct attaatttct catcaatatc tccaggattg aacttggcat ccaagacatc
    15301 ttgcgcaata gccttgactg cgcgagtcac ctcatcacga ccgccatagt taagagcaaa
    15361 attgagaatc aaaccagtgt tactctttgt cttttgttcg gctttataaa gcgcattgag
    15421 agtcgggaca ggaagttttg aatggtcacc aatcatctga attttgacat tattggcatg
    15481 gagttcagga acatacttat cataaaactc cacaggtaga ttcatgataa acttcacttc
    15541 ttttttcggt cgagaccagt tttctgtaga aaaggcatag acagttaaca cctttactcc
    15601 caaatcagaa gccgtcttgg taaccttttg aagtgcatcc ataccagcct tatgccccat
    15661 aatacgtggc tgcatccgct ttttcgccca acggccattg ccatccataa tcacagcgat
    15721 atgcttaggg acttcaattg ctgtttcaat gctttctttc tttttaaaat taaatttaaa
    15781 catggtattt tccttaagat agtatttagt ctgttttctc cgttctactg acaaaaaata
    15841 aggacataat cagcttatta taccatattt ataggcagct aagcaaaaat cagctagctc
    15901 attcttaagt acaatgtagt tatttctcgt tcaatttata tcttatctct aatctagtcc
    15961 agtcaccaaa ctacactagc tagccgtatc ttttatagta aattaataag tgtaatagct
    16021 tattgcgacc gcctgtttgc cttggagaat gactggactg acttatctac ttaggaacgg
    16081 ctacataaat gccagacaga gttgtcaccc ttgatggatg agttctttga ctggtgtctc
    16141 aatcaggccg tcttgccagg ttccaaattg gggaccgctt tggagtatag cctcaaatac
    16201 gaagaaacct ttcgaaccgt tctatcggac ggtaacttag tcctgtccaa taatatggct
    16261 gagagggcaa tgaagacctt ggtgatgggg cgtagtgaaa cagtctggga atagactgtt
    16321 tcagcctgag cctagaaacg aaaaagcgaa ggtggctgtt ttctcagagc tttgagggag
    16381 ccaagtcaac agctatcatt ctgagtcttt tagaaactgc taagcgacat ggac
//
LOCUS       DASFQD010000046        16319 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.046, whole genome shotgun sequence.
ACCESSION   DASFQD010000046 DASFQD010000000
VERSION     DASFQD010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 16319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16319
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.046"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(25..1008)
                     /locus_tag="U1021_001131"
     CDS             complement(25..1008)
                     /locus_tag="U1021_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HEM4711678.1"
                     /translation="MSKDIRVLLYYKYVPIENAKEYAAEHLAFCKSIGLKGRILIADE
                     GINGTVSGDYETTQKYMDYVHANPLFSDLWFKIDEENEQAFKKMFVRYKKEIVHLGLE
                     DNDFDNDIDPLVTTGAYLSPKEFKEALLDEDTVVLDTRNDYEYDLGHFRGAIRPDIRN
                     FRELPQWVRDNKEKFMDKRVVVYCTGGVRCEKFSGWMVREGYKDVGQLHGGIATYGKD
                     PEVRGELWDGKMYVFDERIAVDVNHVNPVVVGKDWFDGTPCERYVNCGNPFCNRRILT
                     SEENEHKYVRGCSPECRAHERNRYISENGLTRQEWAERLEAIGETLTPANA"
     gene            complement(1219..2139)
                     /locus_tag="U1021_001132"
     CDS             complement(1219..2139)
                     /locus_tag="U1021_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711679.1"
                     /translation="MVWTEEKLRPIIHSILNPDEEVLSLYQSKTTKSIYGCILWNSYY
                     YKVFRVSNHPSQSTYKQPTFYDFHGEFYMKGAIRTYLYHTNSWYELSKQSYYLLLFFQ
                     KLWDEKQEVEASWQNGRMQIRLVVEEEGWQVHYRFPDNQAREVERLLASGMLVAIRSS
                     RNFIKIRTSRFVAPYIALIKQRQLYRKKPSKAMLQWEKYQSQLIEIQRTYRLVEENAP
                     KTFFGHWLNKVQLYLCSAIASYWEEVIKGVEWQEAREIKDQRKIEKPHNPIEDKWKEN
                     IARRHKRKVDQLIGHDTLEKLRQLKTELDD"
     gene            complement(2247..2792)
                     /locus_tag="U1021_001133"
     CDS             complement(2247..2792)
                     /locus_tag="U1021_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF-type riboflavin transporter
                     substrate-binding protein"
                     /protein_id="HEM4711680.1"
                     /translation="MKNNSIKTVVATGIGAALFVVIGHLINIPTFVPNTSIQLQYAVQ
                     SLLAVVFGPVVGFLVGFIGHTLKDSLTYGPWWSWILASGVFGLVVGLTKKRLRIQEGI
                     FEGKDILFFNLVQIAANVLAWGVIAPVLDILIYSEAANKVFAQGLVAGIANSITVAIA
                     GTLLLAVYAKSQTKTGSLSKD"
     gene            complement(2813..3661)
                     /locus_tag="U1021_001134"
     CDS             complement(2813..3661)
                     /locus_tag="U1021_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosyl-l-methionine hydroxide
                     adenosyltransferase family protein"
                     /protein_id="HEM4711681.1"
                     /translation="MSNNLLVLQSDFGLVDGAVSAMIGVALQESRDLVVHHLTHDITP
                     YNIFEGSYRLFQTVEYWPEGTTFVSVVDPGVGSKRKSVVALTEQNHYIVTPDNGTLSF
                     IKKYVGIKAVREISEVANRRANTEHSYTFHGRDVYAYTGAKLASGHISFEEVGPELSV
                     DKIVEIPTVPTEVGSDYVKGAIDILNVRFGSLWTSITREEFYTLQPQFEDRFEVTIYN
                     NDMLVYQNQVTYGKSFADVRIGQPLIYINSLYRVGVAINQGSFAKAYNVGVGQNWHIE
                     IKRISN"
     gene            complement(4093..4809)
                     /locus_tag="U1021_001135"
     CDS             complement(4093..4809)
                     /locus_tag="U1021_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015604432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM4711682.1"
                     /translation="MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKKGDPDPETN
                     SALKFVIDRAKQAQVPKHIIDKAIDKAKGNTDETFVEGRYEGFGPNGSMIIVDTLTSN
                     VNRTAANVRSAFGKNGGNMGASGSVSFMFDKKGVVVFAGDDADAIFELLLEADVEVDD
                     VEAEDGTITVYTAPTDLHKAIVALKESGIQEFNVTELEMIPQSEVSLEGDDLATFEKL
                     YDALEDDEDVQKIYTNVDGF"
     gene            4970..5281
                     /locus_tag="U1021_001136"
     CDS             4970..5281
                     /locus_tag="U1021_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000827864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM4711683.1"
                     /translation="MKRNKHLPLTETTYYILLALLEPAHGYHIMQKVEDMSDGDVKIA
                     AGTMYGAIENLLKLKWICSVPSSDKRRKVYQVTATGQEIIKLETQRIQKLHHIAKELG
                     F"
     gene            5292..5918
                     /locus_tag="U1021_001137"
     CDS             5292..5918
                     /locus_tag="U1021_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2812 domain-containing protein"
                     /protein_id="HEM4711684.1"
                     /translation="MIRHKLFTSLQEEEHWINSIQSEGYQLVKVTPWTAAYHFEKCSR
                     TPHPVRLDFHEHIAKGEYSNYLSLFEDCGWQPIQGSRRCGIHYFQQTIEASSTEIFSD
                     TESKKAFYSRYQNYAYSYFGLFLTLFFIHYQVGLQNGYTLWNPKSWYLTPELWERTGT
                     SFWFGFLFETPFALFRSGIIPLFFLAWSIYFLHIAEKGKKEAKKLEKY"
     gene            complement(5990..8158)
                     /locus_tag="U1021_001138"
     CDS             complement(5990..8158)
                     /locus_tag="U1021_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HEM4711685.1"
                     /translation="MKKFLSFEFWQKFGKCLMVVIAVMPAAGLMVSIGNSIPLISPES
                     ELLIRIGNIIAQIGWGIIGNLHLLFALAIGGSWAKEKAGGAFSAGLAFILINLITGHF
                     FGVTTDMLADAAATVTTVFGTEIPVSGYFVNILGQPALNMGVFVGIIAGFVGATTYNK
                     YYNYRKLPDVLTFFNGKRFVPFVVIYRSVLVALGLAIFWPVVQTGINSFGKWIASSQD
                     TAPILAPFVYGTLERLLLPFGLHHMLTIPMNYTSLGGTYDILTGAQAGTQVFGQDPLW
                     LAWITDLINLKDAGDMAQYNDLLANITPARFKVGQMIGSSGILMGLTYAMYRNVDEDK
                     KHKYKGMFISSALAVFLTGVTEPIEFMFMFAAMPLYVVYAFVQGAAFAMADIVNLRMH
                     SFGNIEFLTRTPMAIKAGIGMDVINFIWVTALFAVGMYFIANFMIKKFNLATAGRNGN
                     YDTETTDVVSNSNVDTADASSQVVQIINLLGGRDNIADVDACMTRLRVSVKDVAQVGD
                     ENAWKQAGAMGLIIKDSGVQAVYGPKADVLKSDIQDLLESGVAIPRTEIVATEEVAPE
                     TQFKGMTETVYSVAEGQAIAITEVKDPVFSQKMMGDGYAVEPSSGNVYAPVSGIVTSV
                     FPTKHAVGILSDKGVEVLVHVGLDTVALNGAPFSAKVTDGQRVEAGDLLLVADLDAIR
                     SAGRETTIVVAFTNTAEIKSVSLGNLGQVSQDSQVATVEL"
     gene            complement(8192..8983)
                     /locus_tag="U1021_001139"
     CDS             complement(8192..8983)
                     /locus_tag="U1021_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEM4711686.1"
                     /translation="MKLLTINVHAWLEERQDEKLDVLAQTIAEKAYDVIALQEVNQLI
                     TADLVTKDLKADNYGLILLEKLRTLGQFDYSYYWSNSHIGYDKYEEGIAFLTKLPVYE
                     VDPFYCSQNKSIDSILSRKIMGLTVFYQDQLIDLYSCHINLPGSEEEDQLDNIRTIVE
                     RTGNRRFKILMGDFNTDAFSDREAYEAITELGLYDSYNLAMEKDQGITVEKAIDGWAG
                     HSQEKRLDYIFLNQKKEVLSSLVIFNGENRPIISDHFGVEVEINV"
     gene            9182..9889
                     /locus_tag="U1021_001140"
     CDS             9182..9889
                     /locus_tag="U1021_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018367901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTRA domain-containing protein"
                     /protein_id="HEM4711687.1"
                     /translation="MSKYKKVYQDIKKKIEEQVWSTGQALPTENELMEVYSYSKDTIR
                     KALSLLEMDGYIQKKQGKSSIVIEHGLMKDQYLSEIKTAGELNKRSQHQIQTQLTSLY
                     IIQGQEDLMSTFEVDDKVDFYRVSRVRTIDGERLEYDISYFDRRVVPYLSKEIAESSI
                     YRYLEEELHLTISHSRREISFRFANEEEKQLMDLGDYDMVVVVTSITYLSNGQAFQYG
                     TISYRPDKVSFVSMAKR"
     gene            complement(10118..12382)
                     /gene="glgP"
                     /locus_tag="U1021_001141"
     CDS             complement(10118..12382)
                     /gene="glgP"
                     /locus_tag="U1021_001141"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan family
                     phosphorylase"
                     /protein_id="HEM4711688.1"
                     /translation="MTKFTTFAETNTSKKLADLTNEEIYLQLLNYVKEAAATKPKNTG
                     KRKVYYISAEFLIGKLLSNNLINLGVYKDIQAELAAAGKSLAQVEDVEPEPSLGNGGL
                     GRLASCFVDSMSTLAINGEGVGLNYHCGLFRQVFKKNEQEAEPNFWIENDSWLIPTTI
                     SYDVPFKNFTLKSKLDRLDILGYKKETKNYLNLFDIESVNYDLITDGISFDKTDIKEN
                     LTLFLYPDDSDKNGELLRIYQQYFMVSNAAQLLIDEAIERGSNLHDLADYAYVQINDT
                     HPSMVIPELIRLLTEKHGIEFAEAVAIVKNMTGYTNHTILAEALEKWPLEFLEEVVPH
                     LVDIIKELDALIRAEIKDPAVQIIDESGRVHMAHMDIHFSNSVNGVAALHTEILKNSE
                     LKAFYELYPEKFNNKTNGITFRRWLEFANQDLADYIKELIGDEYLTDATKLEKLLAFA
                     DDKEVHAKLAEIKHNNKLALKRYLKDNKGIELDENSIIDTQIKRFHEYKRQQMNALYV
                     IHKYLEIKNGKLPKRKITVIFGGKAAPAYVIAQDIIHLILCLSELINNDPEVNKYLNV
                     HLVENYNVTVAEKLIPATDISEQISLASKEASGTGNMKFMLNGALTLGTMDGANVEIV
                     ELAGMDNIYTFGKDSDTIIDLYDKAGYVSADYYNGDANIKRAVDFIVSDEVKALGNEE
                     RLGRLHHELISKDWFMTLIDLAEYIEVKEQVFADYEDQDSWNKKVVHNIAKAGFFSSD
                     RTIEQYNQDIWHSN"
     gene            complement(12375..13883)
                     /gene="malQ"
                     /locus_tag="U1021_001142"
     CDS             complement(12375..13883)
                     /gene="malQ"
                     /locus_tag="U1021_001142"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019312918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HEM4711689.1"
                     /translation="MTNRTSGILMHITSLPGKFGIGTFGQSAYDFVDFLVETKQTYWQ
                     ILPLTTTSYGDSPYQSFSAIAGNTHLIDFDLLVEDGLLATEDFQDVNFGDNPEKVDYA
                     LIYQVRRPILEKVVQAFLQDDKKKAAFLEFEKANSSWLTDYAEFMAIKEYFGNKALQE
                     WEDKKVVARNEEALDKYRLELANQIDYYKVTQYFFFSQWKQLKEYANKHHIKIIGDMP
                     IYVSADSVEVWTKPQLFKLDSERKPLYVAGVPADNFSADGQLWGNPIYDWPEHEKTGY
                     NWWIYRIHESFKLYDVLRIDHFKGFSDFWQVDGKAEVAKVGTWEPGPGYNLFKAVKET
                     LGDLPIIAEDLGNIDAKARKLLADCGYPGMKILEFGFFDVTGKSIDAPHRCIPNSVAY
                     TGTHDNEVVNGWYNNLDPEQQEYVDAYSNRKPIEKVSQAMLRMLFATVSDTAIATMQD
                     VLDLGEESRMNMPSTIGGNWEWRMKAEDLTQERKDFLTKMTLLYQRGNENHD"
     gene            complement(14065..16164)
                     /locus_tag="U1021_001143"
     CDS             complement(14065..16164)
                     /locus_tag="U1021_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005592032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEM4711690.1"
                     /translation="MNNNFNNFNNMDDIFNQLMGNIGGYSTEGRRYSINGREVTPEEF
                     AMYRQTGRLPQTEEVAQTQAKGQIKSDGILAKLGRNLTQDAREGKLDPVIGRNKEIQE
                     TSEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEA
                     GTQYRGAFEENVQNLVDEVKKAGNIILFFDEIHQILGAGSTGGDTGSKGLADILKPAL
                     SRGELTVIGATTQDEYRNTIHKNAALARRFNEVKVNAPSAEDTYQILKGIKPLYEAHH
                     NIELPDEVLRAAVDYSVQYIPQRSLPDKAIDLIDVTAAHLAAQHPVTDIQTLEAEMAE
                     AKQLQLEAAEKEDYEKALNEKVRIDKLQKQIDNHTEQQKVVATVNDVAQAVERMTGIP
                     VSQMGASDIERLKELKNRLAANVIGQDDAVEAVSRAIRRNRAGFDDGNRPIGSFLFVG
                     PTGVGKTELAKQLALDLFGNKDAIIRLDMSEYSDRTAVSKLIGTTAGYIGYDDNSHTL
                     TERVRRNPYSIVLLDEIEKADSQVITLLLQVLDDGHLTDGQGNQVNFKNTIIIATSNA
                     GFGYGMAEGEENQDIMDRIAPFFRPEFLNRFNAVIEFKHLDKDDLKAIVELLLAQVNN
                     TLAKKGIQLMVTEAAKEFLMEEGYDKAMGARPLRRVIENQIRDKVTDYYLDHVDVKYL
                     EADVVDGSIQIKEQSFD"
BASE COUNT         4717 a         3536 c         3062 g         5004 t
ORIGIN      
        1 tttttcaatg caattttggt attactaagc atttgctgga gtaagagttt ccccaatcgc
       61 ttccaagcgt tctgcccatt cttgacgagt caagccgttt tcagagatgt aacggttgcg
      121 ctcatgagca cggcattcag gtgaacagcc acgaacatac ttgtgctcat tctcttctga
      181 tgtcaaaatg cgacggttac agaatggatt gccacagttg acatagcgct cacatggtgt
      241 gccatcgaac cagtccttac caacgacaac agggttaaca tggttaacat cgaccgcgat
      301 acgctcgtca aagacataca tcttcccatc ccacaattcg ccacgaactt ctgggtcttt
      361 accataggtt gcgataccac cgtggagctg accgacatcc ttgtagcctt cacgaaccat
      421 ccagcctgag aatttttcac agcgaacacc accagtacag taaacaacta cacgcttgtc
      481 catgaatttc tctttgttat cacggaccca ttgtggcaac tcacggaagt tgcggatgtc
      541 tggacggatc gcaccacgga agtgaccaag gtcatactcg tagtcattac gtgtatccaa
      601 aacaactgta tcttcgtcca agagagcttc tttgaactct tttggtgata ggtaggcacc
      661 tgttgtcacg agtggatcaa tatcgttgtc aaagtcgttg tcttccaaac caaggtgaac
      721 aatttctttt ttataacgaa caaacatttt cttgaaagct tgctcatttt cttcatcaat
      781 cttaaaccac aaatcgctga acaatgggtt tgcatgaacg tagtccatgt acttttgagt
      841 tgtttcatag tcaccagaaa cagtaccgtt gattccctca tcagcaatca aaatacgtcc
      901 tttgagtccg atagacttac agaaagctag atgctcagca gcatattctt tggcattttc
      961 aattggaaca tacttgtaat agagtagaac gcgaatatct tttgacatag tgtctccttt
     1021 tcaatctttg caatagatga taaaactctg tcatttctaa taaatgatac cttacgatta
     1081 tatcgtttag cccctcaaaa gacaaaaatc tgaactgaaa atttagaacc tgtattcgcg
     1141 ggttcaatgc ttatatgtaa aaaatacggt aacatggatg gcatgctacc gcatttattg
     1201 aaggttcgct ataacttctt agtcgtctaa ttctgttttc agttgtcgga gtttttccaa
     1261 ggtatcatgt ccaatcagtt ggtccacttt tcgcttatgg cgtctagcaa tattttcctt
     1321 ccatttatct tcaataggat tatgtggctt ctcgattttc ctttgatctt tgatttctct
     1381 tgcctcctgc cattccactc ctttaataac ttcttcccaa tagctggcaa tggcagagca
     1441 gagatagagt tggaccttat tcaaccagtg tccaaaaaaa gttttcggag cattttcctc
     1501 cactagccga taggtccttt ggatttcaat aagttgactt tggtattttt cccactggag
     1561 catagcttta ctcggctttt ttcgataaag ttgacgctgt ttgattagag ctatatacgg
     1621 tgcaacaaaa cggctcgtcc gtatcttgat aaaatttctg gaggagcgaa tggccaccag
     1681 catgcctgag gccaataagc gttcaacctc ccttgcctga ttatctggaa aacggtaatg
     1741 gacttgccac ccctcttctt caaccactaa gcgaatctgc attctaccat tttgccaact
     1801 cgcctccacc tcttgctttt catcccataa cttttgaaaa aagagaagaa ggtagtagct
     1861 ttgtttacta agttcatacc aactgttcgt gtgataaagg taggtccgaa tcgctccttt
     1921 catataaaat tcgccatgga aatcataaaa agttggctgt ttatatgtag attgtgatgg
     1981 gtggttacta actcggaaaa ccttataata ataactattc caaagaatgc agccataaat
     2041 tgatttcgtc gttttcgatt gataaagact taaaacttcc tcgtcaggat tgagtataga
     2101 atgaataatc ggtctcaact tttcttctgt ccagaccata cttctcccct tgaacacatg
     2161 tttttgtttg ttttatatta ttatatcata tatgtatttt ttggtattga aaaaaaccta
     2221 gaattttttc tagggaaaat aaaaacttaa tctttagaca aactacctgt cttcgtttga
     2281 gattttgcat aaacagccaa aaggagtgtc cctgcaatag caactgtaat actgtttgca
     2341 atacctgcca caagtccctg tgcaaaaacc ttattcgccg cctcactgta gataagaata
     2401 tctaaaactg gggcaatgac tccccaagca agcacattcg ccgcaatctg aacaaggtta
     2461 aagaaaagaa tatctttccc ttcaaaaatc ccttcttgaa tacgtagacg ttttttggta
     2521 agaccaacaa ccaaaccaaa gacccctgat gccaaaatcc atgaccacca tggaccgtaa
     2581 gtcaacgaat ccttaagcgt gtgcccaatg aaaccgacca agaagccaac tacaggacca
     2641 aatacaactg ccaatagcga ttgaacagcg tattgaagct ggatagaagt atttgggaca
     2701 aaggttggaa tattgattaa atgaccaata accacaaaga gggctgcgcc gataccagta
     2761 gcaacgactg ttttgattga attatttttc ataactatct cctaaaattt ctttaattac
     2821 taatacgttt gatttcaata tgccagtttt gacctacacc gacattataa gccttggcaa
     2881 atgagccctg attaatcgca acacctacac gatagaggga attgatataa atcaatggct
     2941 gtccgatacg tacatccgca aaggacttcc cgtaggttac ttggttttga tacacaagca
     3001 tgtcgttatt gtatatggtc acttcaaagc gatcttcaaa ctgcggttgc aaggtgtaaa
     3061 attcttccct cgtaatcgag gtccaaagcg agccgaatcg aacattcaga atatcaattg
     3121 caccttttac atagtccgaa ccaacttccg ttgggactgt tggaatttcc acaatcttat
     3181 ccacgcttaa ttctggacca acttcttcaa agctaatgtg tccagaagcc aatttagctc
     3241 ccgtataggc ataaacatct cgaccatgga aggtgtacga atgttctgta ttggcacggc
     3301 gattggccac ctctgaaatt tctcgaaccg cctttatccc cacatatttt ttgatgaagg
     3361 atagcgtccc attatctggc gttacaatgt agtgattttg ttcggtcaaa gctactacac
     3421 tcttacgttt tgaaccaact cccggatcaa caaccgaaac aaatgttgtt ccctccggcc
     3481 agtattcgac cgtttgaaag aggcgatatg aaccctcaaa gatattgtac ggagtaatat
     3541 catgagttag atggtgaaca actaaatctc tcgattcttg gagagcaaca ccaatcatcg
     3601 ctgaaactgc accatcaact aaaccaaaat ctgattgtaa aacaagtaaa ttatttgaca
     3661 tacattctcc taatcttatt accgttctat gataacagaa aacctgtgac cattcaaata
     3721 gatatttcca aagcctggct atagtttttc cttatacctc atctatcaag cactctacta
     3781 tcagccaccg aaaactcgca aatttttcca tcgtaccttc ttcgaactta agctaaaata
     3841 tccccacttc tctagttcca acaactatcg tctttgagta attggatata aagaaaaccg
     3901 cctagcgcag ttccaatttc caaactttta agccaaaaat tgtccttgtg gacagctgaa
     3961 aataaagaaa accagctacc gctggttctc atttccaacc ttcgacgtcc cacgtacaat
     4021 gagaatcatc taccgacgat ttcaatttcc agccttttag tataaaaaaa gtgctaccag
     4081 cactttttta tactaaaacc catccacatt cgtgtagatt ttttggacgt cttcgtcgtc
     4141 ttctagggca tcgtagagtt tttcaaatgt tgcgaggtca tcgccttcaa gtgatacttc
     4201 tgattgtggg atcatttcaa gttcagtgac gttgaactct tggattcctg attctttaag
     4261 tgccacgatt gccttgtgca aatcagttgg ggctgtatag acagtgattg tgccgtcttc
     4321 tgcttctacg tcatccactt cgacatctgc ttcaaggagc aattcgaaga tggcgtctgc
     4381 atcatcacct gcaaagacaa ccacaccttt tttatcaaac atgaatgata cagaaccaga
     4441 tgcccccatg ttaccgccgt ttttaccaaa agcagagcgc acgttagctg ccgtacggtt
     4501 tacgtttgat gtcaaagtat caacgataat catagaacca tttggtccaa agccttcgta
     4561 acgaccttcc acgaaggttt cgtctgtgtt tccttttgcc ttgtcaatgg ccttgtcaat
     4621 gatgtgtttt ggaacctgcg cttgcttagc acggtcgata acaaatttca gcgctgagtt
     4681 tgtttctgga tctgggtcac cctttttcgc tgctacatag atttcaacac caaatttggc
     4741 gtaaactttt gagttagcac cgtcttttgc ggttttcttg gctacaatat tggcccattt
     4801 acgtcccatg gggaacctcc tacattttat aaaatcgctt tattatacca taaatggcaa
     4861 ggattgagaa gatttttaaa atcttcttca ctatacagtt gacatgtata gtttctcgat
     4921 atataatata tagtacaact atacatttga actatatagg agaagccaaa tgaaaaggaa
     4981 caagcatctc cccttaacgg agacaaccta ctatattcta ttagccctct tggaacctgc
     5041 ccatggctac catatcatgc aaaaagtaga ggatatgagt gatggtgatg tgaaaatcgc
     5101 tgcaggaacc atgtatggag cgattgagaa tcttttgaaa ctaaaatgga tttgttccgt
     5161 tccaagttcc gataaaagaa gaaaagtcta tcaagtaaca gcaacgggcc aagagattat
     5221 taaactggaa acacagcgta ttcaaaaact acatcatatt gccaaagaat taggttttta
     5281 aggaggaagc catgataaga cacaaattat tcaccagttt acaagaggaa gaacattgga
     5341 ttaattcgat tcaatccgaa ggttatcagc ttgtcaaagt aactccgtgg acagcagcct
     5401 atcattttga aaaatgtagt cgaacccctc atcccgtacg ccttgatttt catgaacata
     5461 ttgcaaaagg agaatattca aattacctct ctctatttga agactgtggt tggcaaccta
     5521 tacaaggtag tcgtagatgt ggcatccatt attttcagca aacaatcgaa gcttcaagca
     5581 ctgaaatttt ttctgatacc gaatcgaaaa aagcattcta ttcacgctac caaaattatg
     5641 cctactccta tttcggatta tttctgactt tattttttat ccattaccaa gttggactcc
     5701 aaaatggata cacactttgg aatcctaaat cctggtacct aactccagaa ctatgggaac
     5761 gaactggtac cagtttttgg tttggttttc tctttgaaac cccattcgca ttgtttagaa
     5821 gtggcattat tcccttattt ttccttgctt ggtctattta tttcctccat atcgctgaaa
     5881 aaggtaaaaa agaagcgaag aaattagaaa aatactgatg gcatactatc caaaagaaaa
     5941 agattgaaaa gagttgactg caatcatctt ttcaatcttt ttttactttt tacaactcaa
     6001 ctgtcgcaac ttgactatct tgactaacct gtccaagatt tccaaggctg acagatttga
     6061 tttcagcagt atttgtgaag gcaacaacga tggttgtttc acgtcctgct gagcgaatgg
     6121 catccagatc tgcgacaagg agcaagtctc ctgcttcaac gcgttggcca tctgttacct
     6181 tagctgagaa tggggcaccg tttagtgcaa ccgtatctag gccgacgtgc accaagactt
     6241 ctacaccctt gtcagacaaa atcccgacag cgtgtttggt tgggaagaca ctggttacga
     6301 tacctgaaac tggtgcgtaa acattgccgg agctaggctc aactgcataa ccgtcgccca
     6361 tcattttttg tgagaagacc ggatctttca cttctgtgat ggcaatggct tgcccttcag
     6421 caacagagta aactgtctcc gtcatacctt tgaactgagt ctcaggagca acttcttctg
     6481 tcgcaacaat ttccgtacga gggatggcta cgcctgattc tagcaagtct tgaatatctg
     6541 atttgagaac atctgctttt ggtccataga ctgcttgaac acctgagtct ttgataatca
     6601 agcccatagc accagcctgt ttccaagcat tttcatctcc aacttgtgcc acatctttaa
     6661 cactaacgcg aagacgagtc atacaagcat ccacatctgc gatattatca cgaccaccaa
     6721 gcaagttgat gatttgaacc acttgtgaac tggcatccgc agtatctacg tttgagtttg
     6781 aaaccacatc cgttgtttct gtatcatagt taccattgcg tccagctgtt gctaggttga
     6841 atttcttaat cataaagttg gcaatgaagt acataccaac cgcaaagagg gctgttaccc
     6901 agataaagtt aataacatcc ataccgatac cagctttgat cgccatcggt gtacgtgtaa
     6961 ggaattcgat attaccaaat gagtgcatac gcaagttgac aatgtcagcc atggcaaaag
     7021 ccgcaccctg tacaaaagca taaacgacat agagtggcat tgctgcaaac atgaacataa
     7081 actcaattgg ttctgttaca cctgtcaaga atacggcaag tgctgaagaa ataaacatac
     7141 ctttgtactt atgtttttta tcttcatcca cattgcggta catagcgtaa gtcaatccca
     7201 tcaaaatccc tgatgaacca atcatttgac caactttgaa acgggctgga gtaatgtttg
     7261 caagaagatc attgtactga gccatatcac cagcgtcttt gaggttgatc aagtctgtaa
     7321 tccaagccaa ccagagcgga tcttgtccaa atacttgtgt acctgcttgt gcacctgtca
     7381 agatgtcata ggtaccacca agtgacgtat agttcattgg aatagtcaac atgtggtgta
     7441 aaccaaatgg aagaagcaaa cgttccaagg taccataaac aaaaggtgca agaattggtg
     7501 ctgtatcctg tgagcttgca atccatttac caaagctgtt gattcctgtt tgaacaactg
     7561 gccaaaagat agctaatcct agcgctacaa gaactgagcg atagataacc acaaatggta
     7621 caaagcgttt accgttaaag aaggtcaaaa catcaggtaa tttgcggtaa ttgtagtatt
     7681 tgttataggt tgttgcccct acaaaaccag cgatgatacc aacgaagaca cccatgttca
     7741 gagcaggctg acccaagatg ttgacgaagt agcctgaaac tggaatctct gttccaaaaa
     7801 cagtggttac ggttgctgct gcatctgcaa gcatgtcagt cgtcactcca aagaagtgac
     7861 ctgtaatcaa gttaatcaag ataaaagcaa gacctgccga gaaggcacct ccagcttttt
     7921 ccttagccca gctaccaccg atagccaatg caaagagcaa gtgaaggttt ccgataatcc
     7981 cccaaccgat ttgggcaatg atattcccga tacgaatcaa gagttctgat tctgggctga
     8041 ttaacggaat agagtttccg atagaaacca tcagacctgc tgcaggcata actgcaatca
     8101 cgaccattaa acacttaccg aatttttgcc aaaattcgaa actaagaaat tttttcattt
     8161 tttctccttt attttttggc tctgtgccat tttatacatt aatttcaact tccacaccaa
     8221 aatggtctga aataatcgga cgattctctc cattgaaaat cactaagctg gataaaactt
     8281 cctttttctg atttaagaaa atgtaatcca atcgtttttc ctgactgtga ccagcccatc
     8341 catcgatagc cttttcaacc gtaatcccct ggtctttttc catcgctaga ttgtatgaat
     8401 cataaagccc gagctctgta atcgcttcgt aggcctcgcg atctgagaag gcatcggtat
     8461 taaaatctcc catgagaatc ttaaaacgtc tattgccagt ccgttccaca atcgtacgaa
     8521 tgttatcaag ctggtcttcc tcttcactcc ctggaagatt gatgtgacaa gaatacaggt
     8581 cgatcaactg gtcttgatag aagaccgtca agcccataat ttttcgtgat aggatggaat
     8641 caatagattt attctgacta caataaaatg gatccacttc ataaactggc aacttggtaa
     8701 gaaaggcaat cccttcttcg tacttatcgt agccgatatg tgagttgctc caataatatg
     8761 aatagtcaaa ttgtcccaag gttcttaatt tttctaataa aatcaagcca taattatccg
     8821 ccttcaagtc tttcgttacc aaatcagcag ttatgagctg attgacctct tgaagagcga
     8881 tgacatcata agccttttca gctattgttt gggctaaaac atctagtttt tcatcctgcc
     8941 tttcttctaa ccaggcgtgg acattaattg ttagtaattt cattgctccc cctctctctg
     9001 aaaatgcgta accgttttct tttatagaaa tagtatagcg taaacgtttg cattagtcaa
     9061 tagcttttcc gtaatatttt aaacttttac gtaaaagttg tatattctac taaataaaat
     9121 agatgtattg cccctttcta gctcttttat gatacactaa tgggtagaaa gacaggaaac
     9181 tatgagtaag tataaaaaag tttatcaaga tattaagaaa aaaatcgaag agcaggtttg
     9241 gtcaactgga caggccctac cgacagaaaa tgaattaatg gaagtgtatt cctactccaa
     9301 ggacaccatt cgcaaagcac tatctcttct tgaaatggat ggttatattc aaaagaaaca
     9361 ggggaaatct tctattgtta tcgaacatgg tctaatgaag gaccaatatc tttctgaaat
     9421 taaaacagcg ggcgaattga acaaaagatc acagcaccaa attcagaccc agcttacttc
     9481 gctttatatt attcaaggtc aagaagattt aatgtcaact ttcgaagttg atgataaggt
     9541 agatttctat cgagtgagtc gggtacggac aattgacggt gagcggttgg aatatgacat
     9601 ttcctatttt gaccgtaggg tcgtccctta tctcagcaaa gaaattgccg aaagctctat
     9661 ttaccgctac ttagaagaag aactccattt aacaatttct cattccagac gtgaaatttc
     9721 cttccgtttt gcaaacgaag aagaaaaaca attgatggac ttaggagact atgacatggt
     9781 cgtcgtggtc actagtatca cctatctttc aaatggtcaa gctttccagt atgggactat
     9841 tagctatcgg cctgataagg taagctttgt atcaatggcg aaacggtaaa aggaaacttt
     9901 cgattttttg accaagtgta caaaacttct agaattctat agttataaaa agaatgtctc
     9961 cgcttttttg cagagacatt ctttgcattt atatactaag gagagcacca ataatggtaa
    10021 aaactggtcg gtttttattc ttcaacacat aggaagaatt gatctgataa gttttggagt
    10081 ggttcaatca actttcctac taattgttgg aattcaatta gttactgtgc cagatgtctt
    10141 gattgtactg ttcaatggta cggtctgatg agaagaatcc agctttggca atgttgtgaa
    10201 caactttctt gttccatgaa tcttgatctt cgtaatctgc aaagacttgt tcttttactt
    10261 caatgtattc agccaagtca atcaaggtca tgaaccagtc tttcgaaatc aattcatggt
    10321 gcagacggcc aagacgttct tcgttaccaa gtgcttttac ctcatcgcta acgataaagt
    10381 caactgcacg tttgatattg gcatcgccat tgtagtagtc agcagataca tatccagcct
    10441 tatcgtacaa gtcgatgatg gtatctgaat ctttaccaaa tgtatagatg ttatccatac
    10501 cagccaactc aacaatctca acgttggcac cgtccatggt accaagtgtc aatgcaccgt
    10561 tcaacatgaa tttcatgtta ccagtacctg acgcttcttt agaagccaat gagatttgtt
    10621 ctgaaatatc tgttgcaggg atcaattttt cagctacagt tacattatag ttttcaacca
    10681 aatgaacatt gaggtattta tttacttctg ggtcattgtt gatcaactca gacaagcaga
    10741 gaattaagtg aatgatgtct tgagcaatca cataagctgg ggcagcctta cctccgaaga
    10801 taacggtaat tttacgtttt ggaagcttac cattcttgat ttcaaggtat ttatggataa
    10861 catacaaggc attcatttgt tggcgtttgt actcgtggaa acgtttgatt tgtgtatcaa
    10921 taatagaatt ttcatccagc tcgataccct tattgtcttt caaataacgt ttgagagcca
    10981 atttgttgtt gtgtttgatt tccgccaact tagcatgaac ctctttgtca tcagcaaagg
    11041 ccagcaattt ttcaagttta gtcgcatctg tcaagtattc atcgccaatc aattctttga
    11101 tgtagtcagc gaggtcttgg ttggcaaatt ccaaccaacg gcggaaagtg ataccgtttg
    11161 ttttattgtt gaatttttct gggtaaagct cgtagaaagc tttcaattca gagtttttga
    11221 ggatttctgt gtgaagcgca gctacaccat tcactgagtt agagaagtgg atatccatgt
    11281 gagccatgtg tacacgacct gattcatcaa tgatttggac tgctgggtct ttaatttctg
    11341 cacgaataag ggcatccaat tctttgataa tatcaaccaa gtgcggcacc acttcttcaa
    11401 ggaactcaag tggccatttt tcaagtgctt ccgccaagat agtgtggttt gtgtaaccag
    11461 tcatattctt aacgatggca actgcttccg caaattcaat accatgtttt tcagtcaaaa
    11521 gacggatcaa ctcaggaatt accattgatg ggtgagtatc gttgatttgc acataagcgt
    11581 agtcagccaa gtcatgcaag tttgaaccgc gctcaattgc ttcatcaatc aaaagttgag
    11641 cagcatttga taccatgaaa tattgttggt agatacggag caattcacca ttcttatcag
    11701 aatcatctgg gtacaagaag agtgtcaagt tttctttaat atcagtcttg tcaaatgaaa
    11761 taccgtctgt aatcaagtca tagtttactg actcaatatc aaacaaattg aggtagttct
    11821 tagtctcttt tttatagcca agaatatcaa gacgatccaa ttttgatttc aaagtgaagt
    11881 ttttgaatgg aacatcatag ctgatagttg ttggaatcaa ccaagaatca ttttcgatcc
    11941 agaagtttgg ctctgcttct tgctcatttt tcttaaatac ttggcggaaa agaccacagt
    12001 ggtagttcag accaacacct tcaccgttga tagcaagtgt tgacatagaa tcaacgaaac
    12061 atgaagctag acgtcccaaa ccaccgttac caagtgatgg ttctggttca acatcttcaa
    12121 cctgcgccaa tgatttacca gctgctgcca attctgcttg aatgtctttg taaacaccca
    12181 agttaatcaa gttgtttgac aagagtttac cgataaggaa ctcagctgag atatagtaaa
    12241 ctttacgttt tcctgtgttt tttggttttg tagctgcagc ttcttttacg tagtttaaca
    12301 attgaagata gatttcttca tttgtcaaat cagctaattt cttcgaagta tttgtttctg
    12361 caaatgttgt aaatttagtc atggttttca tttcctcgtt ggtatagtaa tgtcattttt
    12421 gtcaagaagt ctttgcgttc ttgggtcaag tcttcagctt tcatgcgcca ttcccagttt
    12481 ccaccgatag ttgacggcat attcattcga ctttcttcac ccaagtctag gacgtcttgc
    12541 atggttgcaa tagctgtatc actcactgtt gcaaatagca tacggagcat agcttggcta
    12601 actttttcaa tcggcttacg gttgctgtag gcgtccacgt attcttgttg ttctggatca
    12661 agattgttgt accagccatt gacaacctca ttatcgtgag ttccagtgta ggcaactgaa
    12721 tttggaatgc aacgatgtgg agcatcgata ctcttacctg ttacatcaaa gaaaccaaat
    12781 tctaagattt tcatgcctgg atagccacaa tccgcaagca atttgcgagc tttagcgtca
    12841 atgtttccaa ggtcttctgc aatgattgga aggtctccaa gtgtttcttt gacagccttg
    12901 aagagattgt agccaggacc tggttcccag gtaccaacct tagctacttc tgccttacca
    12961 tcaacttgcc agaagtctga gaaacctttg aaatggtcaa tccgaaggac atcataaagt
    13021 ttgaaacttt catggatacg ataaatccac cagttatagc ctgttttttc atgttctggc
    13081 caatcgtaaa taggatttcc ccataattga ccatctgccg agaagttatc agctggtaca
    13141 ccagctacat aaagcggctt gcgttcactg tccaatttga atagttgggg ttttgtccac
    13201 acttcaacgc tatcagcaga aacatagatt ggcatgtctc cgatgatttt gatgtggtgt
    13261 ttgttggcat attctttcaa ttgtttccat tggctgaaga agaaatactg tgtgactttg
    13321 tagtagtcga tttgatttgc caattctaag cggtacttat caagagcttc ctcgttgcga
    13381 gctacaactt ttttatcttc ccattcttgg agagctttat taccaaagta ttccttgata
    13441 gccatgaact ccgcataatc tgtcagccaa gatgagttag ccttttcaaa ctccagaaaa
    13501 gcagctttct tcttatcatc ttgtaaaaat gcttgaacta ccttctccaa aattggtcga
    13561 cgaacttgat agataagagc atagtctact ttttcaggat tatctccaaa atttacatct
    13621 tggaaatctt ctgttgccaa taagccatct tcaaccaaga gatcaaagtc tatcaagtgt
    13681 gtatttcctg caatagcaga gaaagactgg taaggagaat ctccatagct tgtagttgtt
    13741 agtggtaaaa tctgccagta ggtttgcttg gtttccacca agaaatctac aaaatcatag
    13801 gcagactgtc caaaagtacc aataccaaac ttacctggaa gtgaggtaat atgcatcaaa
    13861 attccactgg tacgatttgt cataaaaacg ttttcctttc tgtcggttac gaatatagtt
    13921 taaagcaaac gtttgcactt gtcaaggatt ttataaaaaa agttttaatg tgctctagaa
    13981 agcctatttt atagcatttg ttagcgaata acaaaaaaga aaaatcagat atttctatcc
    14041 gattttccga attcttaact atttttaatc aaagctttgc tcttttattt ggatgcttcc
    14101 atcaaccaca tccgcttcca gatatttgac atcaacatga tccaaatagt aatctgttac
    14161 cttgtctcga atctgatttt caatcacacg gcgcagagga cgggctccca tggccttgtc
    14221 atagccttct tccatcaaaa attctttggc agcttccgtt accattaatt ggatgccttt
    14281 cttcgccagg gtattattga cctgggccaa gagtaattct acaatggctt tgagatcatc
    14341 tttatccaag tgcttgaatt cgataactgc gttaaaacga ttaaggaact ccggacggaa
    14401 gaatggtgcg atgcggtcca tgatgtcttg attttcttca ccttctgcca ttccataacc
    14461 aaaaccagca ttagaagtcg cgataataat agtattttta aagttaactt ggttgccctg
    14521 tccatcagtc aaatgcccat catctagcac ttgcaagaga agggtaatca cttgtgaatc
    14581 agctttttca atctcatcca gaagaacgat tgagtacgga ttgcggcgga cacgctcggt
    14641 aagagtatgg gaattgtcat cgtagccaat gtagccagct gtggtaccga ttaatttgga
    14701 aacggctgtc cgatcgctgt attcagacat atccaaacga ataatggcat ccttgttacc
    14761 aaacaagtct agcgctaact gttttgccaa ctctgtctta cccacacctg tcggaccgac
    14821 aaagaggaag gaaccaatcg gacggttgcc gtcatcaaaa cctgctcggt tacgacgaat
    14881 ggcacgagat acagcttcca ccgcatcgtc ttgaccgata acgttagctg ccagacgatt
    14941 tttcaattcc ttgagtcgtt caatatcaga agctcccatt tgtgagactg gaattcctgt
    15001 catgcgctca accgcctgag ccacatcatt aacagtcgcc accactttct gttgctccgt
    15061 atgattatca atctgttttt gtagcttatc aatacggact ttttcattca aggctttttc
    15121 ataatcctct ttttcagctg cttccaactg caactgtttt gcctcagcca tttctgcttc
    15181 caaggtctga atatctgtca caggatgttg tgcagccaaa tgtgcagcgg tcacatcgat
    15241 caggtcaata gccttatcag gcaagctacg ttgtggaata tattggacag aataatcaac
    15301 cgcagctctc aaaacctcat ctggcaattc aatattgtgg tgggcttcat aaagcggctt
    15361 gatccctttc aaaatctggt aggtgtcctc tgcggacgga gcattgacct tgacttcatt
    15421 gaaacgacga gccagagcag cattcttgtg aatggtattg cggtattcgt cctgtgtagt
    15481 ggcaccgata accgtcaatt ccccacggga taaagctggt ttgagaatat ccgctaaacc
    15541 cttggaacct gtgtccccac cagtgctacc agctcccaaa atctgatgaa tttcatcaaa
    15601 gaagagaatg atatttccag cttttttgac ttcatccaca agattttgca cattttcctc
    15661 aaaagcccca cgatactgag tcccagcttc caagcctgaa atgtcgatgg agatgatttc
    15721 cttgttctta atggctgctg gcacatcacc attgacaatg gcttgagcca atccttctac
    15781 taccgcagtt ttaccaacac cagcatcacc gaccaaaaca ggattatttt tcgtacggcg
    15841 agctaggatt tcagaggttt cttgaatttc cttgtttcgt ccaatgactg gatccaactt
    15901 cccttcacgc gcatcttgtg tcaaattgcg acccaatttt gcaagaattc catctgactt
    15961 tatctgacct ttagcctgtg tttgagccac ttcttctgtc tgtggcaggc gaccagtctg
    16021 acggtacata gcaaattctt ctggtgtcac ttcacgccca ttgatagaat aacggcgacc
    16081 ttctgtactg taaccaccta tattgcccat aagttgattg aaaatgtcgt ccatattgtt
    16141 aaagttattg aaattgttgt tcatagtttt tacctcgttt aagttttatt tgtttttaac
    16201 ttttactgac ctttgtttta aaaaaattga tttagtcttt tagtttgctt ttagtactag
    16261 ctcaaaaggt ttgaggaacc ttttgagctg tgcgggggta ggagtgaaac agtctgggg
//
LOCUS       DASFQD010000047        16065 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.047, whole genome shotgun sequence.
ACCESSION   DASFQD010000047 DASFQD010000000
VERSION     DASFQD010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 16065)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16065)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16065
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.047"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..203
                     /locus_tag="U1021_001144"
     CDS             <1..203
                     /locus_tag="U1021_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEM4711691.1"
                     /translation="QHRKETIERLFGTAKEYHNLRYTREKGKSKMEDKIGLTLACLNL
                     KKLVKRMARRPFYFVQMGWFQH"
     gene            522..1151
                     /locus_tag="U1021_001145"
     CDS             522..1151
                     /locus_tag="U1021_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4711692.1"
                     /translation="MIEWIFFDLGSTLLDEEAAYDYYIDKCVKKLESLDIEVSSDSYK
                     KKMVEYAHKSLDPIRATWHYFAPTEPRPLWTNEGVSLYPETIDALEKLSQNYRLGIVA
                     NQSSSVRDLLKEWGIESYFQLIILSEEVGLSKPDTTIFTLALQKVNIPADRVVYVGDR
                     YDNDILPAKSLGMWTVRILTGFGKHASENEKLKSDWVIPSLQEITNIFE"
     gene            complement(1197..1382)
                     /locus_tag="U1021_001146"
     CDS             complement(1197..1382)
                     /locus_tag="U1021_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711693.1"
                     /translation="MNPVDLFNQVKELIANKDFDGAKQFIEENKDQFGEYLEQAKGLL
                     SGSEGVNGLLDKVKGLF"
     gene            complement(1446..2450)
                     /locus_tag="U1021_001147"
     CDS             complement(1446..2450)
                     /locus_tag="U1021_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HEM4711694.1"
                     /translation="MTIYFGTYTKRKSKGIYKANFDSETGQLSNLELVTEEPNPTYLA
                     FDKAGHLYSVGAENGLGGIVAFNADYTLINHVVSEGAPLCYVAVDETRDLVYGSNFHK
                     GQLLVYKRLADGSLELADVAQHGGSGPHENQASAHVHFSDLTPDKFLVTCDLGCDQVV
                     TYKVSDQGKVEKIATYQAAPGSGPRHIVFHPVAKIAYLICELNSTIEVLIYDGWGQFE
                     HLQTVSTLPEDHTGFNGTAAIRITKDGKFIYGSNRGNDSIAVYKTLADANLELVEIVP
                     TNGKTPRDFTLSPDEKHLIVVHQDSDNATVFERDVENGCLTELSHDFYVPEAVCVTFL
                     "
     gene            2586..3752
                     /locus_tag="U1021_001148"
     CDS             2586..3752
                     /locus_tag="U1021_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000435446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEM4711695.1"
                     /translation="MEDKHQKFSLTWFFRLFLNSQAVTFLLVTLLTFLTIFIFSKISF
                     LFRPIGSFLEIVLLPMILTGLLYYLLNPMVDWMEKHKISRTVGISILFVLISLLIIWG
                     LAVAIPSIQEQVTSFAQNLPANIQKIEGQVTSLLQDQRFEQFRPTALELLNKVNDQAV
                     AYAQKFSTSAVNWASNLISTASQIIVAVLIMPFILFYLLRDGQYLNKHITQYLPTKWR
                     EPIGTVLSDVNGQLSNYVRGQVTVAIIVALMFSVMFSIIGLSYPITLGVMAGFLNLIP
                     YLGSFLAMIPAVILGLIAGPIMLIKVLVVFMIEQTIEGRFVTPLIIGSSLSIHPITIL
                     FVLLTAGQMYGVLGVLLGIPIYASIKVLVKATFEWYKAHSSLYEDEENEVVNEQ"
     gene            3742..4971
                     /locus_tag="U1021_001149"
     CDS             3742..4971
                     /locus_tag="U1021_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEM4711696.1"
                     /translation="MNNSEKMLVCLDQQDLEKANKYFKRALVQDDSETLLSLAAYLEG
                     IGFFPQARQIYEQVKEEFPEVLINLAQIAFEDGLVEESFGYLEEISEDSSVYVEALLV
                     KADLYQAEGLSDVAREKLLEASHLSDEPIILFGLAELDMELELFNEAISYYAQLDNRE
                     IYELTGISTYQRIGIAYASLGKFEAAIEFLEKAVELEYDDQTVFELAALLFEREEYQK
                     ANLYFKQLDTINPDFEGYEYAYAQSLHAEHKIDDALAMTQKGLAKNDFDANLLLQASQ
                     YAYELHDEESAEDYLLKAKEVADDSNELALRLSNLYLEQERFEEVVALFDEEVDNVLA
                     RWNVAKAYQALERDDEAIELYDELAGELAENPEFLADYVAVLRQLGRLDEAKEQASRY
                     IQLVPDDLAMQEFLNEE"
     gene            4975..5691
                     /gene="budA"
                     /locus_tag="U1021_001150"
     CDS             4975..5691
                     /gene="budA"
                     /locus_tag="U1021_001150"
                     /EC_number="4.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019322637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HEM4711697.1"
                     /translation="MQVNRLFQYNTLGALMAGLYGGSLMVGELLEHGDLGLGTLDSID
                     GELIVLDGKAYQAKGAGEKPEVVEVPADMKVPYAAVIFHEAEVIFKQRFEMTSDELHQ
                     RIESYYDGENLFRSIKIKGTFSHMHVRMIPKSASDVRFAEVASRQPEYIAENISGTIV
                     GIWTPEIFHGVSVAGYHLHFISDDLTFGGHVMDYVISEGMVEVGPVDQLDQRFPVQDR
                     QYLFAKFNAKEVREDIDKAE"
     gene            complement(5717..7375)
                     /locus_tag="U1021_001151"
     CDS             complement(5717..7375)
                     /locus_tag="U1021_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_147463931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HEM4711698.1"
                     /translation="MSFDGFFLHHMTAELKTNLEGGRIQKINQPFEQEIVLNIRSNRQ
                     SHKLLLSAHSVFGRVQLTQSDFTNPKVPNTFTMILRKYLQGAIIEEIRQLDNDRILEF
                     SVSNKDEIGDHIQATLMMEIMGKHSNIILVDKSEQKIIEAIKHVGFSQNSYRTILPGS
                     TYIRPPETHSLNPYTVSDEKLFEILSTQELSPKNLQQVFQGLGRDTASELANHLQTDR
                     LKNFRAFFDQATQPSLTDKSYAALPFANSPENQPLFESLSSLLDFYYQDKAERERVAQ
                     QANELIKRVASELEKNRKKLVKQEQELADTETAELMRQKGELLTTYLHQVPNDQASVR
                     LDNYYTGEELEIELDVALTPSQNAQRYFKKYQKLKEAVKHLTNLIEETKATIVYLESV
                     DTMLGQASLAEIDEIREELIETGYLKRRHREKIHKRQKPERYLATDGKTIILVGKNNL
                     QNDELTFKMAKKGELWFHAKDIPGSHVVITDNLDPSDEVKTDAAELAAYFSKARHSNL
                     VQVDMIEAKKLHKPTGGKPGFVTYRGQKTLRVTPTEDKIKSMKI"
     gene            8116..9117
                     /locus_tag="U1021_001152"
     CDS             8116..9117
                     /locus_tag="U1021_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4711699.1"
                     /translation="MLKNKNLLATIVALTVMVVAALFLTQKEQSNSSNSTEKVKIGVL
                     QFVTHDSLDEIYKGIKAGLKEGGYTTTDNLEIDFMNAEGDQSQVQTMSKKLVDNGNEL
                     LIGIATPAAQGLANATTELPIIMGAVTDPVGANLVTDLKNPGGNITGVSDQTPVADAV
                     SLIKEITPDAKTIGVLYSSNEDNSKIQVAEFKAAAEEAGYTVLEYAVASSNEIAATVE
                     VASSKADVLFTPVDNTVASAFSTVVSVVNKTKTPIFTSVEDMVEGGGIASVTLSQYDL
                     GVATGKMAAKILDGANPADTPVQIFNEGTVVVNQKVAKELGITLSDDVISKASKVIE"
     gene            9140..10006
                     /locus_tag="U1021_001153"
     CDS             9140..10006
                     /locus_tag="U1021_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002902146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4711700.1"
                     /translation="MIVSTVSQALLWAVLGLGIFVTFRILNFPDMTTEGSFPLGGAVA
                     VTLLTQGVHPILATLAAVLVGCLAGFITGLLYTKGKIPTLLAGILVMSSCHSVILFIM
                     GRANLGLLNTKRLQDFLPFSEQINGLLLGLGSLAVVIGALMFFLYTRLGQAFIATGDN
                     PDMARSFGINTSRMELLGLVLSNGIIALAGALIAQQEGYADVSRGIGVIVVGMASLII
                     GEVIYGNLTMLERFLAIVVGAIFYQFLILVVISLGINTSYLRIFSAMILATCLMVPEL
                     KNKLLKGASLSR"
     gene            10003..10761
                     /locus_tag="U1021_001154"
     CDS             10003..10761
                     /locus_tag="U1021_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711701.1"
                     /translation="MKAIVELKNATKVVTNGFDEERVILDNVNLTIYQGDFITILGGN
                     GAGKSTLFNVIAGTLPLTSGSVHILGEDVTNWPAEKRAKYLARVFQDPKMGTAPRMTV
                     AENLLIAKYRGEGRGLVPRRLAQQMEEFVQLLPRVGNGLEKHLDTPAGLLSGGQRQAL
                     SLLMASLKQPELLLLDEHTAALDPKTSQSLMQLTDELIETKGMTALMVTHQMEDALRH
                     GNRLIVMKNGQIIQDQTAEEKSKMKLEDYYKLFD"
     gene            10987..11535
                     /locus_tag="U1021_001155"
     CDS             10987..11535
                     /locus_tag="U1021_001155"
                     /inference="COORDINATES: protein motif:HMM:NF012745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM4711702.1"
                     /translation="MNTPLISVIVPVYNVEGYIEQCIRSIQSQTYKNLEVIIVDDGSP
                     DNSIVKAKSLTDGDPRFIYIQQENGGLSAARNTGLEHATGEYVTFIDSDDFLFEASIE
                     MMYHGLKLSHAEISIGAFCRFDDVNFIFYDYGSFKFELLSPEELLERQDNQVLALRLM
                     FWTAWGKNALACGSGICFWLVT"
     gene            11483..11701
                     /locus_tag="U1021_001156"
                     /pseudo
     CDS             11483..11701
                     /locus_tag="U1021_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647096.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl-tRNA synthetase associated
                     domain-containing protein"
     gene            11707..12111
                     /locus_tag="U1021_001157"
     CDS             11707..12111
                     /locus_tag="U1021_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711703.1"
                     /translation="MRKCLAICSLLCCLFLVGCRTGAAYQAEIEPMEQSELYTEKEIE
                     AAILVVQDYFDHHLNSCKLLTIGYSGDNEKEFDEWAEHYGAEEAIILTSSFKVAAEGA
                     EPTLEPNSTHTDWKWILVRNVGGKWEHKGHGY"
     gene            12367..14028
                     /locus_tag="U1021_001158"
     CDS             12367..14028
                     /locus_tag="U1021_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018371225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEM4711704.1"
                     /translation="MSTIKIMALGGVRENGKNLYIAEVNEHIFVLDAGAKYPENEQLG
                     VDVVVPNFDYLEENKHRVAGVFLTHGHADAIGALPYLLEKVKVPVFGSHLTIELAKLL
                     VKGNNATKKFNDFHVINAETEIDFGDSVVSFFQTTHSIPESLGIVVKTDEGNIVYTGD
                     FKFDQAADKFYRTDFGRLAEIGNEGVLALLSDSANADSNVQVASMHEAGEEILNTIAD
                     CDGRVIVAAVASNIVRIQQIFDAAEATGRRVVLTGHDVENIVRTAIQLKKLRLVSERL
                     LVKPKDMNKYEDHELIILETGRMGEPLNGLRKMSIGRHRYVEIKEGDLVYIVTTPSIS
                     KEAVVARVENLIYKAGGTVKSITKKLRVSGHGNARDLQLMLNIMKPKYLFPVQGEYRQ
                     LDAHAKAALEIGMYPENIIIVKRGDVMAFEEGDFVHSGAVPAGDVMIDGNAIGDVGNI
                     VLRDRKILSEDGIFIVAITVNRREKKIISKAKVNTRGFVYVKKSKDILRESSELVNTT
                     VENYFTKDSFDWAELKSAVRDDVAKFLFDQTKRRPAILPVIMEVK"
     gene            14089..14865
                     /locus_tag="U1021_001159"
     CDS             14089..14865
                     /locus_tag="U1021_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000290006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HEM4711705.1"
                     /translation="MAIMKIEYHSEALDMSRQVTVLYPDRNRVENPDDNDIPVLYLLH
                     GMGGNQDSWLNRSTVERLVRYTNLIVVMVNTDKGWYTNTTYGMNYFDAIAVELPQILK
                     RFFQNMSDKREKNFIAGLSMGGYGTFKIAMTTNRFSHAASLSGALYFDFDNPATAELG
                     SLSYWRGVFGDISDKQNPNNLLEITKQSDKKTKFYAWCGEEDFLFEGHQKAVGELKEL
                     GFDIEASFGPGKHEWYYWNQQIEKVLAWLPIDFKLEERLS"
     gene            14931..15626
                     /locus_tag="U1021_001160"
     CDS             14931..15626
                     /locus_tag="U1021_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012000255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HEM4711706.1"
                     /translation="MKLIGNILRTIWRTFWGLIWLSMVLLACGLGLLFYFQQEAAPQM
                     LQTLAQEVQLMVKGQSEVTIEEGVNTIKHLTTDMVNTADHGRWESNTATVYIETQNPT
                     FVAAYETAIANWNATGVFTFVMTSDPNQADIIATEMNDGNTQAAGEANSTTNLLTNYY
                     SLVTVRLNSFYLLNDQYGYDMDRIIHTAEHELGHAIGLDHEDSQTSVMESAGSNHGIQ
                     QADIDAVLALYSN"
     gene            15636..16004
                     /locus_tag="U1021_001161"
     CDS             15636..16004
                     /locus_tag="U1021_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711707.1"
                     /translation="MLRTIKNTIKRYPEQALLFIYNAGIFAWLQSTSHSIMEEIGIDS
                     TWFDKIPEPIKVWTGASLESMQTLLNSSAWGWLIVSMILMMLIRFVKGVIKFVIMLII
                     IGGGLYLLWQNKELLSGLKV"
BASE COUNT         4615 a         2844 c         3743 g         4863 t
ORIGIN      
        1 atcaacatcg gaaagagacg attgaacggc tatttggcac agccaaggaa taccataatc
       61 tgcgctacac gagagaaaaa ggcaagtcca aaatggagga taagattgga ctgactttgg
      121 cgtgcttaaa tctcaaaaaa ctagttaaaa ggatggcaag aaggcctttt tattttgtcc
      181 agatggggtg gtttcagcat taaaacagcc atttttctct aaaaacagta aaaaagacaa
      241 acaccaaaac gatgtttgtc tgcaatctga aattagtaca gtgtactaat ttatccccga
      301 gttagaataa cgagggttat agtaaaaaca agtccgaaga ttttcggact tgttttcaat
      361 gtctgggaga ctgttttatc cccgagctag tatagtgagg gattagtaaa actctctagg
      421 ttttcctagg gaattttctt tgccttgata ttgataaaat ggtattctaa aaaggcagat
      481 caacttaagt attctcattt tgaaaagaga tggagagtgg gatgatagag tggatatttt
      541 ttgatttggg ttcgacgctt ttagatgaag aggctgctta tgattattat atagacaagt
      601 gtgtgaagaa gttagagtct ctggatatag aggtttcatc agattcttat aaaaagaaaa
      661 tggtggagta tgctcataag tcgctggatc ccattcgtgc gacctggcac tattttgcac
      721 cgaccgagcc acgtccttta tggacaaatg agggtgtgag cctgtatcct gaaacaatag
      781 atgctctaga gaagttatca caaaactatc gattggggat tgttgccaat cagtctagta
      841 gtgttagaga tctgcttaaa gagtggggaa ttgagtctta ttttcaactc atcatcctct
      901 ctgaagaggt tgggctatct aaaccagata caactatttt cacacttgcc ttgcaaaaag
      961 taaacatccc tgcagataga gttgtctatg tcggggatag gtatgataat gatattctac
     1021 ctgctaaatc tttgggaatg tggactgtac ggatactgac tggttttgga aagcatgcca
     1081 gtgaaaatga aaaattgaag agcgattggg taattccttc attgcaagag ataacaaata
     1141 tttttgaata aacaaaaaaa ctagactgaa cattctcagc ctagttttta catgtattag
     1201 aataagcctt taactttatc taaaagaccg ttaacacctt cagaacctga taacaagcct
     1261 tttgcctgtt ccaagtattc accaaattgg tccttgtttt cttcgataaa ttgttttgca
     1321 ccatcaaagt ctttgtttgc aatcaattct tttacttggt taaaaagatc tactggattc
     1381 acgttggaat cacctcctat gagactatta aaccaaaact ggacggattt cacaactgaa
     1441 acgacttata aaaatgtaac gcaaactgct tcaggaacat agaaatcgtg tgaaagctca
     1501 gtcaaacagc cattttcgac atctctctca aatacagttg cattgtcaga atcttgatgg
     1561 acaacaatca aatgcttttc atcaggacta agcgtgaaat cgcgaggagt tttcccattt
     1621 gttgggacga tttcaactaa ttctaagttg gcatcagcaa gcgttttgta gactgcgata
     1681 gagtcgtttc cgcggttgga tccataaata aatttaccat cctttgtgat gcgaatagcg
     1741 gcagttccgt tgaaaccagt atggtcttct gggagagtag agacagtttg taggtgttca
     1801 aattgtcccc agccgtcgta gataagcact tcaatagttg aattgagttc acagatgaga
     1861 taggcgattt ttgcgacagg atggaagaca atgtgacgtg gaccacttcc tggcgcagcc
     1921 tgataggttg cgattttctc tacttttcct tggtcagata ccttataggt taccacttga
     1981 tcacatccta aatcacaggt tactaaaaat ttatcgggcg tcaaatcaga aaagtgaaca
     2041 tgggcggaag cttggttttc gtgcggccca gatcctccat gttgagcgac atcagctaat
     2101 tctagcgaac catctgccaa acgtttataa acaagtagtt gccctttgtg gaaattggag
     2161 ccataaacta aatctcttgt ttcatctaca gcgacatagc aaagtggtgc gccctctgat
     2221 acaacatggt tgattagagt atagtcagca ttaaaggcaa cgatacctcc tagaccattt
     2281 tcagcgccga cggagtatag atgtccggcc ttatcaaagg caaggtaggt agggttaggt
     2341 tcttcagtga ccaattctag attgctaagt tgtcctgttt cagaatcaaa atttgcttta
     2401 taaattcctt ttgatttacg ttttgtgtag gtaccgaaat agatagtcat aggattctcc
     2461 tttttggaaa tgattgataa aattatacca tgtttttctg agaaagtcgt ataaattctg
     2521 tagttgattt ttacaaaaat cctttctcca tgttacaata gaaaaaaaga ctaggagtgt
     2581 attagatgga ggataagcat caaaaattta gtctgacttg gtttttccgc ttgtttttaa
     2641 atagccaagc ggtgacattt ttattggtaa ccttgctgac ttttttgacc atatttattt
     2701 ttagtaaaat tagtttttta ttcagaccaa taggaagctt tttagaaatt gtattgttac
     2761 cgatgatttt aacaggtctt ttgtattacc tattaaatcc gatggttgac tggatggaaa
     2821 agcataaaat ttctcgtaca gttggtattt ccattctctt tgttttaatc agtcttctca
     2881 ttatctgggg actggcggtg gcaattccga gtattcaaga gcaagtgaca tcttttgcgc
     2941 aaaacctgcc agcaaatatc caaaaaatcg aagggcaagt gacgagctta ttgcaggacc
     3001 aaagatttga acaatttcgt cctactgcat tggaattgtt aaataaggtc aatgatcaag
     3061 cagttgctta tgcgcaaaaa ttttcaacaa gtgctgtaaa ctgggcaagt aatttgattt
     3121 cgacagcatc tcaaattatt gttgctgttc tgattatgcc ttttattctc ttttatctgt
     3181 tacgggatgg tcagtatttg aataaacaca tcacccaata tctaccaacc aagtggagag
     3241 aaccgattgg aacagtacta tcagatgtga atgggcaatt atcaaactat gttcgtggtc
     3301 aggtgaccgt tgcgattatt gtagccttga tgttctcagt gatgttctca atcattggtc
     3361 ttagctatcc aataactttg ggggtgatgg ctggtttcct caatctaatt ccgtatttag
     3421 gttctttctt ggccatgatt ccagctgtta ttttaggatt gattgctggt ccaatcatgc
     3481 tgataaaggt tttagttgtc tttatgattg agcagactat agaaggtcgt tttgtgacac
     3541 cattgattat cggaagctcc ctaagtattc atccgattac cattttattt gtattattga
     3601 cagctggtca gatgtacggt gtcctaggag ttcttctggg aattccaata tatgcctcta
     3661 ttaaggtttt agtgaaagcg acatttgaat ggtacaaggc acacagtagt ttgtatgaag
     3721 atgaagaaaa tgaggttgtg aatgaacaat agtgaaaaaa tgttggtttg tttggaccaa
     3781 caggatttag aaaaggctaa taagtatttc aagcgcgcct tggtgcaaga tgatagcgaa
     3841 acgcttttgt ccttggcagc ctacttagaa ggcattggtt ttttcccaca ggctagacaa
     3901 atctatgaac aggtcaaaga agaatttccc gaagtactga tcaatcttgc ccaaatagca
     3961 tttgaagatg gcttggttga agaatctttc ggatatttgg aggaaatttc ggaagacagt
     4021 tctgtctatg tggaagcctt attggttaag gcggacctgt atcaggcaga aggcttgtcg
     4081 gatgtggcgc gtgaaaaatt gttagaagca agtcacttat cagatgaacc catcatcctc
     4141 tttggcttag cagaattgga tatggaactg gagcttttta atgaggctat ttcctactat
     4201 gcccagctgg ataatcgtga aatctacgaa ttaacgggaa tttctaccta tcagcgaatt
     4261 ggtattgcct atgcaagttt agggaaattt gaagcggcga ttgaattttt ggaaaaagct
     4321 gttgagttgg aatacgatga tcagacggtc tttgaattgg ctgctctgct atttgaaaga
     4381 gaagaatacc aaaaggccaa tctctatttc aagcagttgg ataccatcaa tcctgatttt
     4441 gagggctatg aatatgccta tgctcagtcg cttcatgccg agcataagat tgatgatgcc
     4501 ttggctatga ctcaaaaagg cctggcgaaa aatgactttg atgccaatct cttgctccag
     4561 gcttctcagt atgcctatga attgcatgac gaggagtctg cggaagacta tctcctcaag
     4621 gcaaaagagg tggcagatga tagtaacgaa ctagctctgc gcttgtctaa tctgtatctt
     4681 gagcaggaac gatttgaaga ggttgtggct ttatttgatg aagaggtcga taacgttcta
     4741 gctcgctgga atgtggccaa ggcttatcaa gctctagaaa gagatgatga agctattgag
     4801 ctttacgatg aattggctgg agaattggct gagaatcctg aatttttggc tgattacgta
     4861 gcggttttac gtcaacttgg tcgtttggat gaggcaaaag agcaagctag tcgttatatc
     4921 caattggtgc cagacgattt agccatgcaa gaatttttga atgaagagta ggttatgcaa
     4981 gtaaatcgat tatttcaata caatacttta ggtgccttaa tggctggact gtatggcggc
     5041 tccttgatgg ttggcgaatt gttggaacat ggtgatttgg gtttgggaac tctggattcc
     5101 attgatggcg agctgattgt tttggatgga aaggcttatc aggccaaggg agcaggggag
     5161 aaaccagaag tggttgaagt tccagctgat atgaaagttc cctatgcggc ggtcattttc
     5221 catgaggcag aagtgatttt caaacaacgc tttgaaatga ctagcgatga attgcaccag
     5281 cggattgaat cctattatga tggcgaaaat ctttttcgtt ctatcaaaat caaagggacg
     5341 ttttcgcata tgcacgtgcg catgattcca aaatcggctt ctgatgttcg ttttgcggag
     5401 gtggcaagtc gccagcctga gtatatcgct gagaatattt caggtaccat tgttggtatt
     5461 tggacgccag agattttcca tggtgtcagt gtggctggct atcatttgca ttttatttcg
     5521 gatgatttga catttggcgg gcatgtcatg gactatgtga tttcagaagg aatggtggaa
     5581 gtgggaccag tagatcaact agaccaacgt tttcctgttc aagaccgcca gtatcttttt
     5641 gctaagttca acgctaagga agttagagaa gatattgata aggcggagta ggtttcaata
     5701 cagaaaaatc catgaactag attttcatgg attttatttt gtcttcagtt ggggtgacac
     5761 ggagggtctt ctgaccgcgg taggtcacaa aacctggctt gccacctgtt ggtttatgga
     5821 gttttttggc ttcaatcatg tcgacttgga ccaagttaga atgtctagcc ttggagaagt
     5881 aggcagccaa ctcggcagca tcggtcttga cctcatcgct tgggtccaag ttgtctgtga
     5941 tgaccacatg actgcctggg atgtctttgg catggaacca aagttcgcct tttttggcca
     6001 ttttgaaggt caactcatca ttttgcaggt tatttttccc gaccagaata atagtcttcc
     6061 cgtccgtcgc caagtaacgt tcaggtttct ggcgcttatg gattttctca cggtggcggc
     6121 gcttgaggta gcctgtttca atcaattcct cacgaatctc atcaatttca gccagactag
     6181 cctgtcccag catggtatca acggactcca gatagacaat ggtcgccttg gtttcctcaa
     6241 tcaagttggt caagtgcttg accgcctcct tgagtttctg gtactttttg aaataacgtt
     6301 gggcattctg gctaggagtc aaagccacat ccaactcaat ctccaactcc tctcccgtat
     6361 agtagttgtc taatctcacg ctcgcttggt catttggcac ttgatgcaga taggtggtca
     6421 ggagttcgcc cttttgccgc atcaactccg ccgtctccgt atccgccaat tcctgctcct
     6481 gcttgaccag tttcttgcga tttttctcca actcactggc tacccgcttg atcagctcat
     6541 tggcctgctg ggccacccgc tcccgctccg ccttgtcctg atagtagaag tccagcagac
     6601 tgctcaggct ctcaaagagt ggctggtttt cagggctatt ggcaaatggc agagcagcat
     6661 aggatttgtc cgtcaggcta ggctgagttg cctgatcaaa aaaggcacgg aagttcttga
     6721 ggcgatccgt ctgcaagtga ttggctaatt cagaagctgt gtcccgaccc aacccttgaa
     6781 agacctgttg gagatttttt ggactcagtt cctgagtcga taagatttca aacaatttct
     6841 cgtcagatac cgtataagga ttgagagaat gcgtctccgg tggacgaatg taggtggaac
     6901 ctggcaagat ggttcggtag gaattttgcg agaaaccaac gtgcttgata gcctcgataa
     6961 tcttctgttc agacttatcc accaagatga tattactgtg cttgcccatg atttccatca
     7021 tcaaggtagc ttggatatgg tcgccaatct cgtccttgtt ggacaccgaa aattctaaga
     7081 tgcggtcatt gtccaactga cgaatttcct cgataatggc gccctgcaag tatttccgta
     7141 gaatcatggt aaaggtattg ggcacttttg gattggtaaa gtccgactgg gtcagctgaa
     7201 cccgcccgaa aaccgaatgg gcggacagga gcaatttatg gctctgacgg ttgctgcgga
     7261 tgttgaggac aatctcctgt tcaaagggct ggttgatttt ctgaatccgc ccaccttcta
     7321 aattggtctt taactcagcc gtcatgtgat gtaaaaaaaa tccgtcaaaa gacatggttt
     7381 tcctctttct aatagctata actcagacta gtatatcata ttttagagaa tttagatgag
     7441 acttggtcta aagccaataa aaaattggta aaaagttttc agaaaattta attaaaagtc
     7501 ttgacaaagt gattttgata ccgtataatc gtctgtaatc agaagaagta gtaaagcaga
     7561 agtcttcagg gagcctgtgg tgctgagaac aggtggcgga gttttatgaa atgggctgat
     7621 gtgcagaatt gtctgtcttc agacttaggt gcacaaatga ttgtttggta tagcatactt
     7681 tgcgtagact gttttggttg agtacgaggc aggtcgacgt agcttatact agcggtatag
     7741 caaggagagc taacaaagta cacagccaaa tcaatcatgc aaatgaactt aaaacaatga
     7801 tagttcggtc cgcacacctt acagtgcaac tccttgttag aggagatgag atatgggagg
     7861 attctagaca attcccataa gtgaggtggc accgtgtcat tgacgccctc gcatactgtt
     7921 tttcagtatg cgggggcttt ttccttgtct ttgtagattg tcgttcaatt gaaaaaatga
     7981 gataccgatc attatattct actttgacaa tgatagaaat tacgaggtaa tcatgatgaa
     8041 acgatggcga tggtgggata atatattgat gacgtagaaa ttggatattg tgcattttta
     8101 aaaggagaat gaaatatgtt gaaaaataaa aacttactag ctacaattgt tgcccttact
     8161 gttatggtag ttgctgccct gtttttgacg caaaaagaac agagcaattc atccaatagc
     8221 acagagaaag tcaaaattgg agttctgcaa tttgtgacac atgattcatt agatgagatt
     8281 tataagggaa tcaaggcagg tcttaaagaa ggtggttata ccacaacgga taatttagaa
     8341 attgatttta tgaatgctga gggtgatcaa tcccaagttc aaaccatgag taaaaaattg
     8401 gtggacaatg gcaatgaatt attgattggt atcgcaacac ctgctgcaca aggtcttgcc
     8461 aatgcaacca cagaattacc cattatcatg ggggctgtga cagatcctgt tggtgctaac
     8521 ttggtaactg acttgaaaaa tcctggtgga aatattacag gggtatcaga ccaaacacca
     8581 gtagcagacg cagtttctct cattaaagaa atcacaccag atgctaaaac tatcggtgtc
     8641 ctctattctt caaacgaaga caattcaaaa attcaagtag cggaatttaa ggcagcagca
     8701 gaagaggctg gctatactgt tcttgaatat gcagttgctt ctagtaatga aattgcagcg
     8761 acagtagagg tcgcaagtag taaagcagat gttctcttta caccagtaga caacacagtt
     8821 gcctcagcat tttcaactgt cgtatctgtg gtaaataaaa ccaaaactcc gattttcacc
     8881 agcgtagaag atatggtaga aggtggaggt atcgcatctg ttacccttag ccagtatgac
     8941 ttgggtgtgg caactggtaa gatggctgcg aaaattcttg atggtgccaa tccagcggat
     9001 acacctgtac aaatctttaa cgagggtacc gttgttgtca accaaaaagt tgctaaagaa
     9061 ttaggaatta ccttgtcaga tgatgtgatt agtaaagcaa gcaaggttat cgaataagag
     9121 ataaaagaaa aggaaaaata tgattgtatc aacagtttca caggctcttt tatgggctgt
     9181 actaggtttg ggaatattcg ttacctttcg gattctgaat tttcctgata tgacgacaga
     9241 gggctctttc ccgcttggag gagcggttgc tgttacctta ttgacgcaag gagttcatcc
     9301 tatcttggct actctagcag cagttcttgt tggctgtttg gcgggcttta tcacaggctt
     9361 gctttatacc aaggggaaaa ttcccactct cctagctggt atcttggtca tgtcttcctg
     9421 tcactctgtc attttattta tcatgggtag ggcaaatcta ggcttactga ataccaaacg
     9481 tttacaagat ttccttcctt tttctgagca aattaatggt ctcttgctag gtctaggtag
     9541 tctagcggtg gtgattggtg ccttgatgtt cttcctctat actcgccttg gacaagcctt
     9601 tattgcaaca ggggataatc cagatatggc tcgcagtttt ggtatcaata caagtcgaat
     9661 ggagttgcta ggtcttgttc tttcaaatgg gatcatcgct cttgcaggtg ccttgattgc
     9721 acaacaagaa ggctatgcgg atgtgtcgcg tggtattggt gtcattgtgg tcggtatggc
     9781 tagtctgatt atcggtgagg taatttatgg taaccttact atgttagaac gattcttggc
     9841 cattgttgtc ggagcgattt tctatcagtt cttaattttg gtggtcattt ccctcggtat
     9901 caataccagc tacctccgta tcttctcggc catgattctg gcaacttgcc tcatggttcc
     9961 tgagttgaaa aataaacttc tgaaaggagc cagtctgtca cgatgaaagc aattgttgaa
    10021 ttaaaaaatg ccaccaaggt ggtgacaaac ggttttgatg aagaacgtgt gattttggac
    10081 aatgtcaatc tgaccattta ccagggtgat tttattacca ttttgggtgg aaatggggct
    10141 gggaagtcaa ctctctttaa tgtcattgct ggaaccctac ccttgactag tggttctgtc
    10201 catattcttg gtgaggatgt aaccaattgg cctgcagaaa aacgtgctaa gtatctggcg
    10261 cgtgttttcc aagatcctaa aatgggtacg gcgccacgga tgacggtggc agaaaatcta
    10321 ctgatagcta agtaccgtgg cgagggacgg ggcttagtgc cacgcagatt ggcccaacag
    10381 atggaagagt ttgtccagct tttgccgaga gtgggaaatg gtctagaaaa acatctggac
    10441 acgccagcag ggctcttatc aggtgggcaa agacaggcct tgagtttgtt gatggcgagt
    10501 ttgaaacagc ctgaactttt actcttggat gagcatactg cagcccttga ccctaagacc
    10561 agccaatcct tgatgcaatt aacggacgag ttgattgaga ccaagggaat gacggccctc
    10621 atggtcactc accagatgga agatgctctg cgtcacggta atcgcttgat tgtcatgaaa
    10681 aatggtcaga ttattcagga ccaaacggct gaagaaaaat ccaagatgaa actagaagat
    10741 tattataagt tgtttgatta gatgacggat tcattctgtg ttaacaacag ctatagcgat
    10801 tttgtccaaa gtctctattc taatccgtta atgtgaaata ctgctatata aaagaggttt
    10861 tcacctcttt ttttactgct ctgaaggata aacagtagtt ttttcttgac taaactcata
    10921 tatatataat agattaagtt ctatcaaaat gatgagatat aaaatacaca aaggatattg
    10981 actaagatga atacaccgct gatttccgtt attgtaccag tttataatgt tgaaggatat
    11041 atagaacaat gtattcgctc tattcaaagt cagacttata aaaatttaga agtcataata
    11101 gtagacgatg gtagtcctga taacagtatt gtaaaagcta agtcgcttac agatggagat
    11161 ccacgtttta tctatatcca acaagaaaat ggtggcttat cggcagctcg taatacaggt
    11221 ttagaacatg caacaggaga gtatgtaacc tttattgact ctgatgattt tttatttgaa
    11281 gcatctattg agatgatgta tcatggattg aaattgtctc atgctgaaat aagcatagga
    11341 gctttctgta gatttgacga tgtgaacttt atcttctacg attatgggtc atttaagttt
    11401 gagttgctat ctccagaaga actattagaa cgtcaggata atcaagtttt agcgcttcga
    11461 ttgatgtttt ggacagcttg gggaaaaaat gcacttgcct gcgggagtgg tatctgtttt
    11521 tggcttgtta cataatgttg ataaggatat tcaagtcttt tttgataaag aaatcctttc
    11581 tgaatccatt ctaaccttcc accccaatgt taatacgaaa acgatttttg taaagacaga
    11641 agatgttttg cgttttgtag aagagattgg cttttcagca acgattgttg acttgaggta
    11701 acaaagatga gaaaatgttt agctatttgt agtctgttgt gttgtctttt tttggtagga
    11761 tgtcggacag gagcagctta tcaggcagag attgaaccga tggaacagtc agaattgtat
    11821 acggaaaaag agattgaggc ggctattctt gtagttcaag attactttga tcaccattta
    11881 aacagttgta aattgctgac tatcggttac agtggtgata atgaaaagga atttgatgag
    11941 tgggcggagc actatggtgc agaggaagct attatcctaa cttcgtcttt taaggtagca
    12001 gctgaggggg cagagcccac cttagagcct aatagtaccc atacggattg gaaatggatt
    12061 ttagtgcgga atgttggtgg taagtgggaa cataagggac atggttacta atgtatatgt
    12121 agaacttcgt tgattttcag cggagttttt tgtaaatttt cttgaaaaaa tgtataatag
    12181 aagcgatagc tatttaggta tttctattta aaagttgcgt tgatggttga atataatttt
    12241 gaaccaaagt gtgtcttttg caaatagagc tccgacatag cagactgtaa ttcgacttgg
    12301 aactcccaag gaccgttggt aagaaaaata aaatggacac ctgtgggatg tccaaaagga
    12361 gtaaagatga gtacaattaa aattatggct cttgggggtg tgcgggaaaa tggaaaaaac
    12421 ctgtacattg ccgaagtgaa tgaacatatt tttgttttgg atgcaggggc aaagtatcct
    12481 gagaatgaac agttaggtgt ggatgtagtc gtcccaaatt tcgattattt ggaagaaaat
    12541 aagcatcgtg tagcaggggt cttcctaact cacgggcatg cagatgctat cggagcgctt
    12601 ccttatctct tggagaaagt gaaagtgcca gtatttggtt cgcacttgac gatcgaattg
    12661 gctaagctac ttgtcaaggg gaataatgct actaagaaat ttaatgattt ccatgttatc
    12721 aatgctgaaa ctgaaattga tttcggggat tcagtggtat ctttctttca gacgactcac
    12781 tctattccag agagtttagg aattgtcgtt aagacggatg aaggaaatat tgtctacaca
    12841 ggtgacttta agtttgacca ggcggcagat aagttttatc gtacggattt tgggcgattg
    12901 gctgaaatcg gtaacgaagg tgtgttggcc ctcttgtcag actcagctaa cgcagatagc
    12961 aatgttcaag tagcgagcat gcatgaggct ggggaggaaa ttctcaatac gattgctgac
    13021 tgtgacgggc gtgttattgt ggcagcagtt gccagcaata ttgtacgtat tcaacagatt
    13081 tttgatgcag cagaagcaac tggtcgtcgt gtcgtgttga caggacatga tgtggaaaac
    13141 attgtccgaa cagcgattca attgaaaaaa cttcgtttgg tcagcgaacg cttgttggta
    13201 aaaccaaagg atatgaacaa gtatgaagac catgaattga ttattttaga aactggtcgt
    13261 atgggcgagc cgttaaatgg attacgtaaa atgtctatcg gtagacatcg ctacgttgaa
    13321 ataaaagaag gtgatctagt ttatattgtt accactccaa gtatttcaaa agaagcggtt
    13381 gttgctcgtg tagaaaactt gatttacaag gctggtggaa cagtcaaatc cattacaaaa
    13441 aaactgcgtg tatctggtca cggcaatgcg cgtgatttgc agctcatgct caacatcatg
    13501 aagcctaaat atcttttccc agttcaaggg gagtatcgtc aattggatgc tcacgctaag
    13561 gctgcgcttg aaatcggtat gtatccagaa aacattatca tcgttaagcg tggggatgtc
    13621 atggcttttg aagaggggga ttttgtccat agcggagcgg ttcctgctgg tgatgtcatg
    13681 attgacggaa atgccatagg cgatgttgga aatatcgtcc ttcgtgaccg taagatcctc
    13741 tcagaagacg gtatctttat cgtggctatc actgtcaacc gccgtgagaa aaaaatcatt
    13801 tctaaagcca aggtcaatac tcgtggtttt gtctacgtga aaaagagcaa ggacatcttg
    13861 cgtgagtcat cagaattggt gaatacaacg gtggaaaatt acttcacaaa ggatagcttt
    13921 gactgggcag agcttaagag tgctgttcgc gatgatgtag caaaattcct ctttgaccaa
    13981 accaaacgtc gcccagctat tttaccggtg attatggaag tgaaatagag ttttataaat
    14041 gcaaagagcc gagggcaact caggctcttt accataagga gaagatttat ggcaataatg
    14101 aaaattgaat accattcaga agctctagat atgtctagac aggttacggt tttatatcca
    14161 gatcgcaatc gtgtggaaaa tcctgatgac aacgatattc ctgtcctata tcttttgcac
    14221 ggtatgggag gaaatcagga ttcctggctg aatcgttcta cagtggaacg attggttcgt
    14281 tataccaatc ttatcgtggt tatggtcaat acagataaag gttggtatac caataccact
    14341 tacggtatga attacttcga tgccattgca gtagagttgc ctcaaattct caaacgattt
    14401 ttccaaaata tgtctgacaa gcgggagaaa aattttatcg ctggtttgtc tatgggtggt
    14461 tacgggacct tcaagattgc catgacgacc aatcgttttt cacatgcagc ttcgctttca
    14521 ggggcattgt attttgattt tgataatcca gcgacagcag aattgggaag tctttcgtat
    14581 tggcgaggag tatttggtga catttctgat aaacagaatc caaataattt gttagaaatt
    14641 actaaacaat ccgataaaaa gaccaaattt tatgcctggt gtggtgagga ggattttctc
    14701 tttgaagggc atcaaaaggc agttggggag ttgaaagagc tgggatttga tatagaggca
    14761 agtttcggac ctggtaaaca tgagtggtac tactggaatc agcagattga gaaggtattg
    14821 gcttggttgc caattgattt caaattggaa gaaagactgt cctagttttt aagaaaagtt
    14881 tcagaaatta tggctatact aaaacctatt tctagaaagt ggtatagtct atgaaactta
    14941 ttggaaatat tctacggacg atttggcgga cattttgggg tctgatttgg ttatcaatgg
    15001 tgttattggc ttgtggtcta ggtctattat tctattttca acaggaagca gcgcctcaga
    15061 tgttacaaac actagctcaa gaagtgcaat tgatggtcaa aggacagtct gaagtgacga
    15121 ttgaagaagg tgttaatact attaagcacc tgacgactga tatggtcaat acagctgatc
    15181 atggtcgatg ggaaagcaat actgcgactg tttacattga aacccagaac ccaacatttg
    15241 tagctgccta tgaaacagcc attgcaaatt ggaatgcgac aggggtattt acttttgtga
    15301 tgacaagtga tccaaatcag gctgatatta ttgctactga gatgaatgat ggaaataccc
    15361 aggcagcagg cgaggcaaat tcaacgacta atttattgac gaattattat agcttggtaa
    15421 cggtgcgtct gaatagtttt tatttattaa acgaccaata tggctatgat atggatagaa
    15481 ttatccatac agctgaacat gaattgggtc atgcgattgg tttggatcat gaggatagtc
    15541 aaacatctgt catggagtct gcagggtcaa atcatggtat ccagcaagct gatattgatg
    15601 ccgtccttgc cttgtattca aattagagga gaaacatgtt acgaacaatt aagaacacaa
    15661 ttaaacgata cccagagcaa gccttgcttt tcatttataa tgcaggaatc tttgcttggc
    15721 tacaatcgac tagccattcg ataatggaag aaatcggaat agatagtact tggtttgata
    15781 aaatccctga accaattaaa gtttggacag gtgccagtct ggagagcatg cagaccttgc
    15841 tcaattcttc ggcttggggc tggctgattg tgtccatgat tttgatgatg cttatccgct
    15901 ttgtcaaagg tgtgattaag tttgtcatta tgctcatcat tattggtggc ggtctttatc
    15961 tgctctggca gaataaggaa ttgcttagtg gattgaaggt ataaaaatcg caaaagaaaa
    16021 aaagaagctg agcaagacct cttagatgtc tgctcagctt ttttg
//
LOCUS       DASFQD010000048        16037 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.048, whole genome shotgun sequence.
ACCESSION   DASFQD010000048 DASFQD010000000
VERSION     DASFQD010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 16037)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16037)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16037
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.048"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..1561)
                     /locus_tag="U1021_001162"
     CDS             complement(<1..1561)
                     /locus_tag="U1021_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEM4711708.1"
                     /translation="MKQASYPIQGMTCASCAMTVEKAVGKLAGMEEVSVNLATEKLSV
                     SYDEKILGLEDIRQAVEKAGYQLVDNLVTESYDISGMTCASCAMTVEKALGKLEGVEE
                     VSVNLATEKATIRYSRHKQNPASLERAVEQAGYQLIRPEEVEEAADEGPSKEEKLWHR
                     FVWSAAFTLPLLYIAMGPMLPWGGLPLPALLHQPLVYAISQVILLIPILYIGRSFFQK
                     GFKTLLQGHPNMDSLIAVGTGAALVQGLLMIAFLLMGKEVAMHGHHPELYFESAAVIL
                     TLITLGKYFEARAKGQTSEAIKKLMDLAPKTAQVLRNGQEIQVPIEEVVVGDQVIVRP
                     GQQIPVDGQVLEGQTRVDESMLTGESLPVKKALGDNVFGGTLNQQGAITMQATKVGRD
                     TTLAQIIRLVEEAQGSKAPIAKLADQVSAIFVPVVMGLALFSGLAWYFLGQESWIFSL
                     SIIIAVLVIACPCALGLATPTAIMVGTGKGAENGLLFKSGQAIETLQGVNTIVFDKTG
                     TITEGKPQVTDI"
     gene            complement(1682..3565)
                     /locus_tag="U1021_001163"
     CDS             complement(1682..3565)
                     /locus_tag="U1021_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C69 family dipeptidase"
                     /protein_id="HEM4711709.1"
                     /translation="MKKTFVRIATLLMLVCLFPAQLVQACSGFIIGKGLTTDGSILYG
                     RTEDYPYPPDNGAHNKNYIVVPAASYAEGDMLVDETFGFTAPHLANEFKYTSTPDAAR
                     GDGSNGNYGAHGFNEKGVSMTATVTAIPNAKVLAVDPLVEAGGLGEPILIDYVLPRVT
                     SAREGVELIAKTINEKGSAEGNIVIIADKNEVWYMEILSGHQYVAIKFPEDKYAIFAN
                     TYYLGHVDFTDTENVIASAKVEEVAKQADNYVTVDGQFHIAKSYGPATYAEADRSRVY
                     AGIKLMDPASPVTYEDAVYDLLRQPTDPSRRFSLQDTFALQRNRFEHLPEFRPDDEAG
                     KVKQGDNGANDQAADATYKYALGNENVIDAHVYQINSSLPSAFGGTVWLGLAQTRNTP
                     YVPFYGIVTDTYEAFKNRSASYDTNSWYWTVQNIDKMAISHPELFGTSIQEKWIALES
                     EWIAAQAALDAQYAGLSEDAAVTLAPAVTEETLARSAEIFAQLKAVEAEMMAKIEAAT
                     TPSSSSTDSSSSTEPSTSTEPSTSTEPSSSGTENSTSTSTSTSSSTSQSTSASDTGGA
                     TDTSSSSGTVVSSDKKVTPTNKKGKSSLPSTGEQVSLLLVALGVAGILTAIFLHRKKS
                     SKE"
     gene            complement(3654..4514)
                     /gene="tehB"
                     /locus_tag="U1021_001164"
     CDS             complement(3654..4514)
                     /gene="tehB"
                     /locus_tag="U1021_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HEM4711710.1"
                     /translation="MTVLVPYKRMPIWNQDTVPQHFLTKHNTKVGTWAKIKVLKGQLK
                     FEPISDDNEILGEYVYGPTDEIPFVEPQAWHRVTLLTEDTEFFLEFFCQPEDYFAKKY
                     DYTRTHSEVLEALKIIEPCKVLDLGCGHGRNSLYLAQQGFEVTAVDKDVPSIRTLLQV
                     KELEDLDLQAGTYDINSASLEQDYDWIISTVVFMFLERDRVPAIIRNMQEQTRPGGYN
                     LIVAAMDTEDAPCPMNFSFTFGAGELKEYYRDWELVKYNEDFGQLHKRDENGNFLKMR
                     FATMLARKNV"
     gene            4668..5711
                     /locus_tag="U1021_001165"
     CDS             4668..5711
                     /locus_tag="U1021_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEM4711711.1"
                     /translation="MKAAIYEKAGKMTVAEVEKPSLQAKDDVIIKVVRACVCGSDLWG
                     YGEDIHHDHGDTNSGHEAIGIVEEVGEDITTLVPGDFVIVPFTHGCGHCDACRAGFDG
                     TCDNHPGYTNWGNNYQSQYIRFHYGNWALVKIPGQPSDYSEGMIKSLLTLADVMPTGY
                     HAARVADVKPGDKVVVIGDGAVGQCAVIAAKMRGASQIIMMSRHADRQQMALESGATA
                     IVAERGEEGIAKVREILGGGADAALECAGTEASIDQALGVLHNGGRIGFVGVPHYNNH
                     ALGSTFAQNIIIGGGSASVTTYDKEILLDAVLKGDINPGRVFTQTYSLDNIDQAYKDM
                     ANRKTIKAMVTVD"
     gene            complement(5831..6688)
                     /locus_tag="U1021_001166"
     CDS             complement(5831..6688)
                     /locus_tag="U1021_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711712.1"
                     /translation="MIEVKDISKSFKENMVLDSITMTASDGEITSIIGSNGAGKSTLI
                     AIIMGYYFSDRGTVQSGNVSVMPDANAMFEDVTGLEFLNFISDLKNVPREEAVKYAEI
                     LGIKDDLQKKIQGYSFGMRKKISFIQAAIGNFQNYIFDEPTSGVDGPSAQKMLEIILT
                     LKKNGAAILLTSHNLEELERVSDYIYVLEDGKITREGTVIDITSRTCLTEKDSWIEYI
                     LRVRNIDLLQSKLTEYFPEQIDSETLLIKLSKGDTIYSVFQTLQEVSEYIDEFYLYRR
                     SLRDIIYGQ"
     gene            complement(6690..7373)
                     /locus_tag="U1021_001167"
     CDS             complement(6690..7373)
                     /locus_tag="U1021_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711713.1"
                     /translation="MASLFLFYMKRDLKSFKTAIVSAVYFFITYLFIRYGDSVGRIFD
                     NSDGIAILKVMYAVFAFVGFLFGASLFSNIISQGISSRDFRFILPYQSRRALYFSKFL
                     MSFVFFLLQILISTIVVLVFRKDAVFSFQQFCNISIFYFYMLSIITLISTISKNDRTA
                     MLVNIIISIIYPTIFVFSNFVNHDFLELLLWITPYHYIEKTWEVLFLMLLSVVFLGIG
                     VSVFEKKEI"
     gene            7578..7730
                     /locus_tag="U1021_001168"
     CDS             7578..7730
                     /locus_tag="U1021_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aureocin A53 family class IId bacteriocin"
                     /protein_id="HEM4711714.1"
                     /translation="MKALLNWLFKVLKAAYYWAKNNWKTVQKWLDIGMYFEWILSKIK
                     QILGIK"
     gene            7834..8271
                     /locus_tag="U1021_001169"
     CDS             7834..8271
                     /locus_tag="U1021_001169"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711715.1"
                     /translation="MEKKIISHSNNYLYHEFLLSIFYTMLSIFVSLAVSIFWNITWYH
                     YVLVFICSISCINLIREFFLNKTWYITVEKNKIICSYGTILKIEKVVLLSKVYSFEIK
                     ENFLSSKLDCYNIALKTLDSEFEIKGIAHGDLQAIVQHIENLS"
     gene            8271..9599
                     /locus_tag="U1021_001170"
     CDS             8271..9599
                     /locus_tag="U1021_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEM4711716.1"
                     /translation="MKKILLLLKYIYDFTKAMIANYSFLLFFNNELATKFFIFSTIIS
                     ASFLIYRIIYYSNYFNFEFTTNYLIVKKGIFLKKIYKVRYSKILGYEFHQNLLFRFFQ
                     IYQVQIFFPDTGDNKSITLPILNNEEKNYLSNKLLITDEETSNNEPNVDNLYPVIPLP
                     IYKIVLSAFISSNYLYIYTIYWTISEILQYLDIHFDKYLFIFYYSNPLYVSFFILIII
                     LSLTSIAKQIWDYINFKVYNTEHSLIISNGIFQKNLIEINKIDISYLVLKQSLGQAVF
                     KICSLHAGIFNVKSDSKNKINTLFPHQSINNFSNDLLNILPTFDIEDLPIKKLLKFPV
                     YEVVCSLVPLIFIYTIVQLHFSIISFATEIIMYIFYTFLLECKFAKFEERENYIIIKR
                     GLLLKKIFITDKSHLEWEIKYQFYNYLTIRKLGIKLQKFKKLYFLMLKNK"
     gene            complement(9690..10157)
                     /gene="smpB"
                     /locus_tag="U1021_001171"
     CDS             complement(9690..10157)
                     /gene="smpB"
                     /locus_tag="U1021_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEM4711717.1"
                     /translation="MAKGEGNVIAQNKKARHDYTIVDTVEAGMVLTGTEIKSIRAGRI
                     NLKDGFAQIKQGEAWLVNVHIAPYDEGNIWNQEPTRTRKLLLRKKQIESLGNEVKGTG
                     MTLVPLKVYIKDGFAKVLIGLAKGKHDYDKRESIKRREQDRDIKRTMKAINAR"
     gene            complement(10160..12529)
                     /gene="rnr"
                     /locus_tag="U1021_001172"
     CDS             complement(10160..12529)
                     /gene="rnr"
                     /locus_tag="U1021_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEM4711718.1"
                     /translation="MKNEIINYIKEVGPVTMDQLADQLGASSAKSFTDLVKLVSSMEG
                     SRQLVFDNAGRIALPAPKVSKNKVTLQGIFRAHKSGFGFVTIDEEEDDLFVSRDDVNF
                     AIEGDRVEIAIKKVADRLKGTAAEAEVIDILEHSLRTAVGLIVFDEDKPEYAGYIKSK
                     NQKIAQKIYIKKSPLVLTGTEILKVDIEAYPNKKRDHFVATIRDVVGHKDDVGIDVLE
                     VLESMDIVSKFPDEVLAEADRVPESPSEQDFAGRLDLRDEIIFTIDGADAKDLDDAVH
                     IKQLKNGNLELGVHIADVSYYVTEGSALDQEAVKRGTSVYVTDRVVPMLPERLSNGIC
                     SLNPNVDRLTQSAIMEIDRKGKVVKHWIGQTVIKTTFRMTYSDVNDMIAGNQEKLAKY
                     KAIVPSVELMVKLHETLESMRYKRGALNFDTTEAKIIVNKDGLPVDIQLRQRGIAERM
                     IESFMLAANECVAEHFAKLDLPFIYRIHEEPKSDKLQKFIDYATSFGLTVYGTASSIS
                     QDALQDLMERVKDEPYADVLNMMLLRSMQQARYSEHNHGHYGLGAEFYTHFTSPIRRY
                     PDLLVHRMVREYGHNPAEKAEHFEQVIPELAKSSSSLERRAIEAEREVEAMKKAEFMQ
                     EFVGQEFDGVVSSVVKFGLFVELPNTVEGLIHITNLNEYYQFHERTLTLQGEKSGRVF
                     RVGQPIRIKLTRADKMTGEIDFAHVPSELDIVEKALKAKRRTTSHSNRDRDDRSGRGR
                     GKHHKQEAASRDSGRHKSGKDHKSKSGKKDKKKKPFYKEVAKKNKKKRR"
     gene            complement(12961..13194)
                     /gene="secG"
                     /locus_tag="U1021_001173"
     CDS             complement(12961..13194)
                     /gene="secG"
                     /locus_tag="U1021_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEM4711719.1"
                     /translation="MYQALLAILLILSVILIVVIFIQPAKNQSSNVFDSSSGALFERT
                     KARGFEAVMQRITAILVFLWMLDALALVIISSK"
     gene            complement(13241..13390)
                     /gene="rpmG"
                     /locus_tag="U1021_001174"
     CDS             complement(13241..13390)
                     /gene="rpmG"
                     /locus_tag="U1021_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008809064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEM4711720.1"
                     /translation="MRVKINLQCSECGSKNYLTSKNAKTHPDKIEVLKYCPKERKVTL
                     HLETK"
     gene            complement(13390..14595)
                     /locus_tag="U1021_001175"
     CDS             complement(13390..14595)
                     /locus_tag="U1021_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter"
                     /protein_id="HEM4711721.1"
                     /translation="MDDGSSYWKQNLKVAWLGNFLTGTSFTLVMPFISVFVEELGVGP
                     GQVEYYAGLAVSANAFAAAVMAPIWGSLADRYGRKPMMVRAAFAMIFTMGGMAFVPNV
                     FWLLALRVLNGVFTGYIPNATALIASQVPKDKTGYALGTLSTGAVAGNLIGPTLGGIL
                     AEMFGVHTVFLLVGLLYAIVVLLTVFYIREDFVPIKKGEEMSVKEVFEQVKDRQMLVG
                     LFVTSMIIIAAAQAVVPILTLYVRHLGQTDNLLFVAGFIISLPGMASLVTSGYLGKIG
                     DRIGNHRLLLIALTYSLLINVFCVFAENPFQLGLLRFMYGFGTGVLLPSVNSLLTKLT
                     PKEGISRIFSYNQLFNNLGSVVGPMMGSAVAAHMGYDWVFYLSSGLVLFNLIWSLTNF
                     RNYLKVRDV"
     gene            complement(14582..15184)
                     /locus_tag="U1021_001176"
     CDS             complement(14582..15184)
                     /locus_tag="U1021_001176"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEM4711722.1"
                     /translation="MVKIIGLTGGIASGKSTVTAFLREQGYSVIDADAVVHELQAKGG
                     KLYQILLKEFGQDILSDDGNLDRFKLGQAVFADSNLRARLSDLQDQIIRHELLARRDA
                     LKQTEDVIFMDIPLLYEADYSGEVDEVWLVYVDRAQQLERLMKRNGLAVQDAENRLAA
                     QLSLEEKRSQAQVVIDNSGAVEATLAQVAQLLEELKDGRR"
     gene            complement(15177..16004)
                     /gene="mutM"
                     /locus_tag="U1021_001177"
     CDS             complement(15177..16004)
                     /gene="mutM"
                     /locus_tag="U1021_001177"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HEM4711723.1"
                     /translation="MPELPEVETVRRGLNRLVKGKVIEKVKVTYAAMIKTGVDAFCQD
                     LLGQEILDVDRRGKYLLIYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFTDES
                     TLVYQDVRKFGTMELLGKADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSKKPIKSH
                     LLDQSLVAGLGNIYVDEVLFRAQVHPAQASNQLSAEQVTSLRQATIEVLQLGIEKGGS
                     TIRTYKNALGMDGTMQDYLQVYGKTGQACLRCQTEIVKIQLGGRGTHFCPTCQVKHG"
BASE COUNT         4727 a         3724 c         2975 g         4611 t
ORIGIN      
        1 ggatgtctgt cacttgtggc ttgccctcag taatggtccc agtcttgtcg aagacaatgg
       61 tgttcacacc ttgtagggtt tcaatagctt gaccagactt gaacagtaga ccattttccg
      121 ccccttttcc agtcccaacc atgatggcag tcggcgttgc taagcccaga gcacaagggc
      181 aggcgatgac caagacggcg atgatgatgc ttaatgaaaa aatccatgat tcttgaccca
      241 agaagtacca ggccagaccg gaaaaaagag ccaagcccat gacgactggt acaaatatgg
      301 cagatacttg gtcagccaat ttggcgatgg gagccttaga cccttgagcc tcttctacca
      361 agcgaataat ctgggccaga gtcgtatcac gaccaacctt ggtagcctgc atggtaatgg
      421 cgccttgctg gttaagggtg ccgccaaaaa cattatcgcc tagagctttc ttcactggca
      481 ggctctcacc cgtcagcata gactcatcca cacgtgtctg accttcgaga acctgaccat
      541 caacaggaat ctgctgacct ggacgaacaa tgacctggtc accgaccacc acttcttcaa
      601 tcggcacttg tatttcctga ccatttcgca agacctgagc cgtcttggga gccagatcca
      661 tcaatttctt aatggcctca gaagtctgac ctttggctct agcttcaaaa tattttccta
      721 gggtaatcaa ggtcaagata acggcggctg attcaaaata cagttctgga tggtgaccgt
      781 gcatggccac ttctttcccc atcagaagaa acgcaatcat caaaagacct tgaaccaagg
      841 ctgcccctgt cccaacagca atcaaggaat ccatattggg atggccttgc aagagagttt
      901 taaagccttt ttggaaaaaa ctgcgtccga tatagaggat agggatgagc aagatgactt
      961 ggctgatcgc atagactagt ggttggtgga gcaaagctgg taatggaagc ccaccccaag
     1021 gcaacatagg ccccatagca atatagagca gtggaagagt aaatgctgct gaccagacaa
     1081 atcgatgcca cagcttttct tccttgctcg gtccctcgtc cgcagcctct tctacttctt
     1141 ctggtcgaat cagctgataa cctgcctgct caactgctct ttcaagacta gctggatttt
     1201 gcttatgacg gctataacgg atagtcgcct tttctgttgc cagattgaca gagacttctt
     1261 ctacaccctc tagttttccc agagcttttt caaccgtcat ggcacaggaa gcacaggtca
     1321 tgcctgaaat gtcataagac tcggtcacca aattatcgac caactgatac cccgcctttt
     1381 caactgcctg acgaatatcc tctagtccca aaatcttttc atcatagcta acactcaatt
     1441 tttcagtcgc taggttgaca ctgacttctt ccattcctgc taatttgcca accgctttct
     1501 caaccgtcat agcacaggaa gcgcaggtca taccttgaat gggatagctt gcttgtttca
     1561 taggttactc cttttccgac tacatctgta aacaaattat acaatatacg actacatttg
     1621 taaacaaagt tgtttcaaaa aagtagattg aaatcaatcc aacctacttt tacatattca
     1681 tttattcttt actggacttt tttcgatgaa gaaaaattgc tgttaaaatt cctgcaacac
     1741 ctagcgccac caacaagagg ctgacttgct cacctgtact aggaagactt gatttacctt
     1801 ttttattggt aggtgttact ttcttatcag aagacactac tgttccgctg gaggaggaag
     1861 tatccgtagc tcctcctgtg tcagaagcac ttgtagactg acttgtactg cttgaagtac
     1921 tggttgaagt actggttgag ttttcggtac cacttgatga tggctcagtg ctggtcgatg
     1981 gttcagtact agtggatggt tcagtactac ttgatgagtc ggtgctgctg gatgacggag
     2041 ttgttgctgc ttcaattttt gccatcattt cagcttcaac agcttttagt tgggcaaaaa
     2101 tctctgccga acgagccaag gtttcctcgg ttacagctgg agccagggtt acagctgcat
     2161 cttctgaaag tccagcatat tgagcatcaa gagcagcctg tgcagcaatc cattcacttt
     2221 caagagcaat ccatttttct tgaatcgatg taccaaataa ctctgggtgt gagatggcca
     2281 tcttatcaat attttgtacc gtccagtacc atgaattcgt gtcgtaagaa gctgagcgat
     2341 ttttaaaggc ttcataagta tccgtcacaa taccataaaa tggaacatac ggtgtattcc
     2401 ttgtctgagc caagcccaac cacactgtgc caccgaaggc tgatggtaag ctgctattga
     2461 tctgataaac atgggcatcg atgacgtttt cattaccaag agcgtattta taagtcgcat
     2521 ctgccgcttg gtcattcgca ccattatccc cttgttttac cttgcctgct tcatcgtctg
     2581 gacgaaattc tggaagatgt tcaaaacggt tacgttgtaa ggcaaaggta tcttgtaaac
     2641 taaagcgacg acttggatct gttggctgac gtagcaaatc atacacagca tcttcatagg
     2701 ttacaggcga tgctggatcc atcaatttaa tacctgcata cacacgggaa cggtctgctt
     2761 cagcataagt tgcaggaccg tatgatttag cgatatggaa ctgcccatcg actgtcacat
     2821 aattatccgc ttgtttggct acttcttcaa cctttgcaga agcaatcaca ttttctgtat
     2881 cggtaaaatc gacatgacct agatagtaag tatttgcaaa aattgcatac ttatcttcag
     2941 ggaacttgat ggctacgtat tggtgtcctg acaaaatttc catgtaccaa acttcatttt
     3001 tgtcagcaat aataacaata ttcccttctg ctgagccttt ttcattgatt gtctttgcaa
     3061 tcagctcaac accttcacgc gcactagtga ccctaggaag aacataatca atcaaaattg
     3121 gctctcccag ccctccagct tcaactagag gatcaactgc caagacttta gcatttggaa
     3181 tagctgttac agtagcagtc atggatacgc ctttttcatt aaaaccatgc gccccataat
     3241 taccatttga accatcccca cgcgccgcat caggcgtaga ggtgtacttg aactcatttg
     3301 ccaagtgtgg tgctgtaaaa ccaaatgttt catccaccaa catatctccc tcagcatagc
     3361 ttgctgctgg aaccacaata taatttttat tgtgcgcacc attatctggt ggatagggat
     3421 aatcttccgt tctaccataa aggatagaac catccgttgt caaccctttc ccaatgataa
     3481 agcctgaaca ggcttgaaca agttgggcgg ggaataggca aaccaacatt agtaatgtgg
     3541 ctatacgaac aaaagtcttt ttcatagact tctcctttca tataataaaa tacccatttg
     3601 cacatatatt gtatcgcaaa agcacctgcc ttgcaagtgc tttcagatat attttacaca
     3661 ttttttctag ccaacatagt cgcaaaccgc attttgagga aattaccatt ttcatcccgc
     3721 ttatgaagtt gaccaaaatc ttcattgtat ttgaccagtt cccagtcacg gtagtattcc
     3781 ttcaactcac ctgctccaaa agtaaaggag aaattcatag ggcagggggc atcttccgta
     3841 tccatggccg ccacaatcaa gttatagcca ccaggtcgtg tctgctcctg catattgcgg
     3901 ataatggctg gcacccgatc ccgctccaag aacataaaga ccactgttga gataatccag
     3961 tcgtaatcct gctccagact agctgagtta atatcgtaag tcccagcctg caagtccaag
     4021 tcctccaatt ccttgacctg caagagtgtc cgaatacttg gcacatcctt atcaactgcc
     4081 gtcacctcaa atccctgctg agccaagtaa agactgttac gaccatgacc acagcccaag
     4141 tccaagacct tacaaggctc gatgattttc aaggcctcca agacttccga atgcgtccgc
     4201 gtgtagtcgt actttttagc aaaataatcc tctggctgac agaaaaattc caagaaaaac
     4261 tccgtatcct ctgtcaacaa ggtcactcga tgccaagcct gtggctctac aaagggaatc
     4321 tcatctgtcg gaccatagac atattctccc aaaatctcat tatcatctga aatcggctca
     4381 aatttgagct gacctttcaa gactttgatt ttggcccaag tacccacctt ggtattgtgc
     4441 ttggtcaaaa aatgctgggg aaccgtatcc tgattccaaa tgggcatgcg tttgtaagga
     4501 actaaaaccg tcattatctc tccttttctt tccgatacac ttagtctatc acaaaggaaa
     4561 tatgaattca aacacatttt tttcttgact tggagtgaac tccaaggtgt ataatattca
     4621 tatcaattta gaaaggatat ttactgacaa gtaagtatgg gatgaatatg aaagcagcta
     4681 tttatgaaaa agccggtaag atgaccgttg ctgaagtcga aaaaccaagc cttcaagcca
     4741 aagatgatgt cattatcaag gtcgttcggg cctgtgtctg tgggtcggac ctttggggct
     4801 acggagaaga cattcaccat gaccacggtg acacaaactc tggtcatgaa gccatcggta
     4861 tcgttgaaga ggtaggcgaa gacatcacaa cacttgttcc tggtgacttt gtgattgttc
     4921 catttacaca tggttgcgga cactgtgatg cctgtcgtgc tggctttgac ggtacttgtg
     4981 acaaccatcc aggctacacc aactggggca acaactacca gtctcaatac attcgtttcc
     5041 actacggcaa ctgggccttg gtcaaaattc ctggtcagcc aagtgactac tcagaaggca
     5101 tgatcaaatc tctcttgact ctggcagatg ttatgccaac tggctaccac gcagcccgcg
     5161 tagcagatgt caaacctggt gacaaggtcg tcgtcatcgg tgatggtgca gtggggcaat
     5221 gtgccgttat cgctgccaaa atgcgcggag cttctcagat tatcatgatg agccgtcacg
     5281 cagaccgcca gcaaatggct ctggaatcag gggctactgc catcgtagca gaacgtggcg
     5341 aggaaggaat tgccaaagtc cgtgaaattc taggtggcgg agctgacgcc gcccttgaat
     5401 gtgccggaac agaagcctca attgaccaag ccctcggcgt gcttcacaat ggcggtcgta
     5461 tcggttttgt aggtgtgcca cactacaaca accacgccct tggctcaacc tttgctcaaa
     5521 atatcattat cggtggtggc tctgcttctg tcacaaccta tgataaggaa attttgctcg
     5581 atgccgttct caaaggcgac atcaacccag gtcgagtttt cacccaaact tacagtctgg
     5641 acaatatcga ccaagcctac aaagacatgg ccaaccgcaa aacgattaaa gcaatggtga
     5701 cggtggatta agataaataa taagccccag atagtctcgt aactgtctgg ggtatttgtt
     5761 ttccgataac aaaaaagacc aggatttctc ccagtcttag cgactattga tcgccttcgt
     5821 acgtttgggc tcattgccca tatataatat ctctcaatga ccttctatag aggtaaaact
     5881 cgtcaatgta ctctgatact tcttgtaatg tttgaaaaac agaataaatc gtgtcgcctt
     5941 ttgaaagttt aatcaaaaga gtttctgaat caatttgctc tggaaaatac tctgtcaact
     6001 tcgattgtaa aagatcaatg tttctaaccc taaggatata ctctatccaa gaatctttct
     6061 ctgtcaaaca cgttctagaa gtaatgtcta taacagttcc ttctcttgta atcttgccat
     6121 cttccaatac ataaatataa tcagaaactc tctctaattc ttctaaattg tgcgatgtta
     6181 ataagattgc cgcaccattc tttttcaatg tcagaataat ctctaacatc ttttgagcag
     6241 atggaccatc tactcctgat gttggctcat caaaaatata gttttggaaa tttccgatag
     6301 cagcttgtat gaagctaatc ttctttctca ttccaaatga atagccttga atcttctttt
     6361 gtaaatcatc tttgattcct agtatttcag catattttac agcttcttcc ctaggaacgt
     6421 ttttcaagtc tgatataaag tttaaaaatt caagacctgt aacatcctca aacatagcgt
     6481 ttgcatctgg catcacagag acatttccag actgaactgt tcctctatct gaaaaataat
     6541 aacccattat aattgctatt aaagtggact tccctgctcc attactacca atgatagatg
     6601 tgatttctcc atctgatgca gtcatagtta tgctgtccaa aaccatgttt tccttaaatg
     6661 atttggaaat gtccttcact tcaatcatct tatatctcct tcttctcaaa aactgaaacc
     6721 cctataccta aaaaaacaac tgacaagagc attaaaaata gaacttccca tgttttttca
     6781 atataatgat agggagtaat ccataacaac agttccaaaa aatcatgatt gacaaagtta
     6841 gaaaacacaa aaatagtagg gtaaataata ctaataatga tgttcactag catagctgtt
     6901 cgatcatttt tactaatagt agatatcaag gtgataatcg aaagcatata gaagtaaaaa
     6961 atactaatat tacaaaactg ttggaaagaa aaaactgcat cttttcgaaa cacaagtaca
     7021 actatggttg aaatcaaaat ttgtaaaagg aaaaacacaa aggacattaa aaactttgaa
     7081 aaatagagtg cccgccgaga ttgataaggc aaaataaatc taaaatctct tgatgatatc
     7141 ccttgagaaa taatattaga gaacagggat gcaccgaata gaaagccgac aaaagcaaaa
     7201 acggcataca tcactttcaa aattgctatt ccatcggaat tatcaaagat tcttccaaca
     7261 ctatctccgt atctaatgaa aagataagtg atgaaaaaat agactgctga gacaatcgct
     7321 gttttaaaag attttaagtc tcgcttcatg taaaataaaa atagtgaggc caaatttatt
     7381 ctcccttcat gtaatacagt ctattttatc aaaaaaacga accactatca acttttttca
     7441 aaaaatagaa gcaaataata ttaaaagacg aacattaggc aaacaaatag ataaatgata
     7501 cgatttttgt tgacaatctt ttttctttgt tttataatca aactgtgggt aacccccaca
     7561 gaaggaggag aaatattatg aaagcattat taaattggtt gtttaaagta ttaaaagcag
     7621 cctactattg ggctaaaaat aactggaaaa ctgtccagaa atggctagat attgggatgt
     7681 actttgaatg gattctttct aaaattaaac agattttagg aattaaataa cgacattgtc
     7741 taattttatt catgcaatgt cattaaaata aaactccata aaatatggag ttttatttta
     7801 acttttagat attataagga ctgattatcg gctatggaga aaaaaatcat ttctcattca
     7861 aacaattatt tgtaccacga atttttattg agtatatttt atactatgct atccattttt
     7921 gtctcgcttg cagtgtctat attttggaat atcacatggt atcattatgt tttggtgttt
     7981 atttgctcaa tttcttgcat aaatctaata agagaatttt tcctcaataa aacttggtat
     8041 attactgttg aaaaaaataa aataatctgt tcttacggaa ctatattaaa aatagaaaaa
     8101 gtggtactcc tatccaaagt atacagtttt gaaataaaag aaaatttcct ctccagtaaa
     8161 ctagattgtt ataatattgc tttgaaaact ttagattctg aatttgaaat taaaggaatc
     8221 gctcatggcg atttacaggc cattgtacag catatagaaa acctgtctta atgaaaaaaa
     8281 tattactact acttaaatac atatatgatt tcacaaaagc gatgatagct aattacagct
     8341 ttttgctatt ttttaacaac gaactagcta ctaaattttt tattttttca actataataa
     8401 gtgcttcatt tttgatttac agaatcatct actattcgaa ctattttaat tttgagttca
     8461 ccacaaatta tttaatagta aaaaaaggaa tctttctcaa gaaaatatat aaagtaagat
     8521 actccaagat acttggttat gaatttcacc agaatcttct ttttagattt tttcaaattt
     8581 atcaggttca aatttttttc cctgataccg gtgataataa atcaattact ctccccattt
     8641 tgaataacga agaaaaaaat tatttgtcca ataaacttct aattactgat gaagaaacca
     8701 gcaacaatga accaaatgtt gacaatttat acccagtaat tcctttacca atttataaaa
     8761 ttgttctttc tgcttttatt agctcaaact atctttacat ttatacaatt tattggacta
     8821 tttctgaaat tcttcaatac ttagatatcc attttgataa atatttattt attttttatt
     8881 attctaaccc actatatgtc tcctttttta tattaattat aatactatca ctgactagta
     8941 ttgccaaaca aatatgggac tatatcaatt ttaaagttta taatactgaa cattcattaa
     9001 tcatttcaaa cgggatattt caaaaaaatc ttatagaaat aaataaaata gatattagct
     9061 atcttgtcct aaagcagtct ttaggacaag cagtttttaa gatttgttcc ttacatgctg
     9121 gtatctttaa cgttaaatct gattcaaaaa ataaaattaa tactttattc ccccaccagt
     9181 ctataaataa tttttctaat gatttattaa atatcttgcc aactttcgat atagaagacc
     9241 tcccaataaa aaaactttta aaattcccag tatatgaagt agtttgctcg ttagtccctc
     9301 ttatttttat ctatacaatc gtacaattgc atttttctat catttcattt gcaaccgaaa
     9361 taattatgta tattttttat accttccttc ttgaatgtaa atttgccaaa tttgaagaaa
     9421 gagaaaacta tataataatc aaaagaggat tgttgttaaa aaaaattttc atcactgata
     9481 aaagtcacct agaatgggaa ataaagtacc aattttataa ctatttgact attagaaaat
     9541 tgggaattaa actgcaaaaa tttaaaaagt tatacttttt aatgctaaaa aataaataga
     9601 attatagact tcctactata taaaaaaaac aaatacagta gttcattctg gctctattat
     9661 tcaatggatt ggatactagc acaccaaact catctcgcat taatcgcctt catggtccgc
     9721 ttaatatcac ggtcttgctc acggcgttta attgactccc gcttgtcgta gtcgtgcttc
     9781 cctttggcaa gtccaatcaa aaccttggca aagccatcct tgatatagac cttgaggggc
     9841 accagggtca tccctgttcc cttgacctca ttacccaagg actcgatttg cttcttccgc
     9901 aagagaagtt tgcgtgtccg cgttggctcc tggttccaga tattgccctc atcgtaggga
     9961 gcgatatgga cattgaccaa ccaagcctcg ccctgcttga tctgggcaaa gccgtcctta
    10021 aggttaatcc gccccgcacg aatagactta atctccgtcc ccgtcaggac catccccgcc
    10081 tccactgtat cgacaatggt atagtcgtgg cgggcttttt tattctgtgc aatcacattg
    10141 ccctcaccct tggccatgcc tatctccttt tcttcttgtt ctttttagcc acttctttgt
    10201 aaaatggttt ctttttcttg tcttttttgc cactttttga cttgtggtct ttcccagact
    10261 tgtgacgtcc gctgtcgcga ctagcagctt cttgcttgtg gtgcttacct cgtcctcgcc
    10321 ctgaccgatc atcacgatca cggttagagt gactggtcgt tctccgtttg gctttcagag
    10381 ctttttccac aatatccagc tcggacggca cgtgggcaaa atcaatctcc cctgtcatct
    10441 tgtccgcccg cgttagcttg atacgaattg gctgaccaac acggaagacc cgacctgatt
    10501 tctcaccctg caaggtcaga gtccgctcgt ggaactggta gtattcgttg aggttggtga
    10561 tatgaatcag accttcaacc gtatttggca actcgacaaa gagaccaaac ttgactacgc
    10621 tagacacgac accatcaaac tcttgcccga caaattcttg catgaactct gccttcttca
    10681 tggcttcgac ttcccgctct gcctcaatgg cacggcgttc taaactggac gaagacttgg
    10741 caagctcagg aatgacctgc tcaaaatgct ctgctttttc cgcaggattg tgaccatatt
    10801 cccgtaccat acggtgaacc agcaagtcgg gatagcggcg gataggactg gtgaagtggg
    10861 tgtaaaactc cgcacccaga ccgtagtggc cgtggttgtg ctccgagtag cgtgcctgct
    10921 gcatggaacg gagcaacatc atgttgagga catccgcata gggttcatcc ttgacccgct
    10981 ccatgaggtc ctgaagggcg tcctggctga tagagctagc cgtaccatat accgtcagac
    11041 caaagctggt cgcatagtcg atgaacttct gcagcttgtc cgacttgggc tcctcgtgga
    11101 ttcgatagat gaaaggcagg tccaacttgg caaaatgctc agcaacgcac tcgttggcag
    11161 ccagcatgaa ggactcaatc atccgctcgg caatgccccg ctgacgcagt tgaatatcga
    11221 ctggtagacc atccttgttg acgatgattt tggcttctgt cgtgtcaaag ttgagggcac
    11281 cgcgtttgta ccgcatagat tcaagggttt catggagttt gaccatgagc tcaacacttg
    11341 gcacgatagc cttgtattta gccagctttt cctgatttcc tgcaatcatg tcgttgacat
    11401 cggaataggt catacggaag gtggttttga taaccgtctg gccaatccag tgcttgacta
    11461 ccttgccctt gcgatcaatt tccataatag ccgactgggt tagacggtcc acatttggat
    11521 tgagggaaca aatgccgttt gacaggcgtt ctggcaacat gggcaccaca cggtccgtca
    11581 catagacaga cgtcccacgc ttgacagctt cctggtccaa ggcagagcct tcggtcacat
    11641 agtagctgac atcggcgata tggacaccca actccagatt gccgttcttg agctgcttga
    11701 tatggaccgc atcgtccaag tccttggcat ctgcaccatc gatagtaaag ataatctcat
    11761 ctcgcaggtc caaacgtcct gcaaagtctt gttcagacgg gctttctggt actcggtcgg
    11821 cctccgccaa aacttcatca ggaaacttcg acacgatatc catagactcc aagacttcca
    11881 agacatcgat ccccacatcg tccttatggc ccaccacgtc ccgaatggtc gcaacaaagt
    11941 gatcccgttt cttattggga taagcctcga tatcaacctt gaggatttcc gttccggtca
    12001 ataccagagg tgacttcttg atgtaaatct tctgagcgat tttctggttt ttagacttga
    12061 tgtaacctgc atattctggc ttatcttcgt caaaaacaat caagcccacc gctgttctca
    12121 ggctatgttc caaaatatca atgacttccg cttccgcagc cgttcccttg agacgatctg
    12181 caaccttttt gattgcaatt tcaactctgt caccttcgat agcaaagttg acatcgtcac
    12241 ggctgacaaa gagatcatct tcctcctcgt caatggtcac aaaaccaaaa cctgacttgt
    12301 gggcacgaaa aataccctgt aaggtcacct tgtttttgga cacttttgga gctggaagag
    12361 caattcgacc cgcattgtca aagacaagtt gacgactacc ttccatgcta gaaaccagct
    12421 tgaccaagtc tgtaaagctc ttggcagaac tagctccaag ctgatctgcc agctggtcca
    12481 tggtcacagg accaacttct ttaatatagt ttataatttc gtttttcatg ttgtatttac
    12541 cagagtgcag gataaaaacc tagcactatc tctctttcaa tcctttagtt tatcttttat
    12601 tactgcgacg tacgaggaaa ctccgtttcc ctatttccaa cttcaaataa tctcatcatt
    12661 atttgaactc gctttgtcgt acttcagtac agtctgcagc tcgttgccta gtactaaaag
    12721 caaactaaaa gactgtattt tgcgttatat ccagacgcag tggttgattg ctccaacaat
    12781 caaatgattg ttggaggtgg gagataggat ttgcaaagca aatctcaata gttcgcgtat
    12841 aacgctccga accataccta ttcaacttgt gcgagggtgg cagacgaact cctttacatt
    12901 tgtcgagttc tggcccactc ccaaaaaaat agaccaagaa caagtcccag tctgatttat
    12961 ctacttactt gaaatgataa caagtgccag cgcatccagc atccaaagaa aaacaagaat
    13021 agctgtaatg cgttgcatca ccgcttcaaa accacgggcc tttgtacgtt caaataaggc
    13081 tccactagaa gagtcaaaga cgttgctaga ctggttttta gccggttgaa taaaaatcac
    13141 tacaatcaaa ataacagata aaatcaacag aattgctaat aatgcttgat acatattttt
    13201 ttcactttct acaataactt atgacattat accataaaac ctacttagtt tcaaggtgga
    13261 gggttacttt tctctctttt gggcagtatt taaggacttc aatcttatct ggatgagtct
    13321 tggcgttttt gctagtcaag tagttcttgc taccacattc tgaacattgt aaattgattt
    13381 taactctcac taaacatccc ttactttcaa atagtttcta aaattggtca aagaccagat
    13441 aaggttaaag aggacaagtc cgctcgacag atagaaaacc cagtcataac ccatgtgagc
    13501 agccaccgca gaccccatca tgggaccaac aaccgaacct agattattaa agagttggtt
    13561 gtaggaaaat atccttgaaa tcccttcttt tggggtcaac ttggtcaaaa gagaattgac
    13621 cgaaggcaac aatactcctg tcccaaaacc atacatgaat cgcaacaaac caagctggaa
    13681 aggattttct gcaaaaacac agaaaacatt aatcaacaga ctataagtca aagcaattaa
    13741 taggaggcga tggttgccaa tacggtcacc aattttccct aaataacctg atgtcactag
    13801 cgatgccata ccaggcaagg aaatgataaa accagcaaca aataacagat tatctgtctg
    13861 tcccaaatgt cgcacataga gggtcaatat aggaacaaca gcctgagcag ctgcaataat
    13921 aatcatagaa gtcacaaaaa gcccaaccag catttgccga tctttcacct gctcaaatac
    13981 ctctttaacc gacatttctt cgcctttttt gattggaaca aaatcctctc gaatatagaa
    14041 aacggtcagt aacacaacga tagcataaag aagtcccacc agcaaaaata ccgtatgtac
    14101 gccaaacatc tctgctaaga taccacctag ggtcggacca atcaaattac ccgctaccgc
    14161 acctgttgat aaggtaccca gagcataccc cgtcttatcc tttggaacct gactggcaat
    14221 caaggcagtc gcattgggaa tgtaccctgt aaataccccg tttaggacac gtaaggcaag
    14281 caaccaaaaa acatttggta caaaggccat accacccata gtaaaaatca tcgcaaaagc
    14341 tgcccgcacc atcataggct tgcgaccgta acggtccgcc aaactccccc agataggagc
    14401 cataactgcc gctgcaaagg cattggccga cactgccagc cctgcatagt attccacctg
    14461 tccaggtccc actcccaact cttctacaaa gaccgagata aagggcataa ccaaggtaaa
    14521 actcgtccct gttaggaaat ttcccaacca agccaccttc aaattctgct tccaataact
    14581 actaccgtcg tccatccttt aattcctcca aaagttgcgc aacctgtgct aaggtcgcct
    14641 caaccgctcc gctattgtca atcaccacct gggcttgcga ccgtttttcc tctaaagaaa
    14701 gctgagcagc cagacgattt tccgcatctt gaacagctaa gccattacgt ttcataagcc
    14761 gttccaactg ctgcgctcta tcgacataaa ccagccagac ttcatctact tccccgctat
    14821 aatctgcctc gtaaagcaaa ggaatatcca taaaaattac atcctcagtc tgcttgagag
    14881 catcccttct tgccagcaat tcatgtctga taatttggtc ctgcaggtca gacaggcgag
    14941 cccgcagatt gctatccgca aaaacagcct gacccagttt gaacctatct aaatttccat
    15001 catctgatag gatgtcttga ccaaattctt tcagcaaaat ctgatagagc ttgccacctt
    15061 tggcctgcaa ttcatgcacg accgcatccg catcgatgac tgaatagccc tgttctcgta
    15121 aaaaagctgt gaccgttgat tttccagagg cgattccgcc tgttaaaccg ataattttaa
    15181 ccatgtttca cctgacacgt gggacagaaa tgcgtccctc gaccgcccag ctggattttg
    15241 acaatctccg tctggcaacg gagacaggcc tgccctgtct ttccgtaaac ttgtaaataa
    15301 tcctgcatgg tcccatccat gcccaaggca tttttatagg tccgaatggt tgaaccacct
    15361 ttttcgatac ccagttgcag aacttctatg gtagcttggc gaaggctagt tacctgctct
    15421 gccgacagct gattacttgc ttgagcagga tgaacttgtg ctctaaacag aacctcatct
    15481 acatagatat tgcccaaacc agccaccaaa gactggtcca aaagatgcga cttaatgggc
    15541 tttttcgact tagctaactt tttggcaaat tcttctaagt caaaatcttc ctctgtcggc
    15601 tcaggaccaa tttttcgact gataaaatag gcatccacat ctgccttgcc cagcagttcc
    15661 atggttccaa acttgcggac atcttgatag accaaggttg attcatccgt aaaggtgaaa
    15721 aaggcatgaa agtgcttgtt ggcaggcact tggtcaggaa agaaattgta cttaccttcc
    15781 attcgcaagt gggaaatgag gacatggtcg gtcaggtaaa tcaagagata cttgccacga
    15841 cggtccacat ctaaaatctc ctgaccaagc aagtcctgac agaaggcatc cacaccagtc
    15901 ttaatcatag cagcataggt caccttgacc ttttcgatga cctttccctt gaccaaccga
    15961 tttaaaccac gacgaaccgt ctcaacctca ggcaattcgg gcatactaag atactaagcc
    16021 gttaagcgac tcaaaga
//
LOCUS       DASFQD010000049        15998 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.049, whole genome shotgun sequence.
ACCESSION   DASFQD010000049 DASFQD010000000
VERSION     DASFQD010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 15998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15998
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.049"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(104..556)
                     /gene="nrdI"
                     /locus_tag="U1021_001178"
     CDS             complement(104..556)
                     /gene="nrdI"
                     /locus_tag="U1021_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HEM4711724.1"
                     /translation="MKKKIYLVYISLSGNTESFVKRLKSFFQFQTDWEIELVHVKDLV
                     KQDIPFYQLDAPFVAFLPTYLEGGNGVDNGDVEILTNPLGDFIALGTNAELCLGVVGS
                     GNRNFNNQYCLTAKQYAERFNFPVIDTFELRGMQNDIERIGRKIMELM"
     gene            complement(633..1565)
                     /locus_tag="U1021_001179"
     CDS             complement(633..1565)
                     /locus_tag="U1021_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM4711725.1"
                     /translation="MNKFFRKQRVRFLRKARKNKFWSVILGISREKYAERISGSIIYG
                     LLSSIAVNFFFRPGNVYSSGVTGLAQIVSALAASYAGWNVPIAVVYYGLNIPLLILAW
                     YKIGYKFTIFTFITVSFSSFFIQFMPPVTLTTDPLVNAIFGGLMLGTGIGFALRNNVS
                     SGGTDIVSIIIRKKTGRQVGSISLIVNIMIMLIAGMTFGWQYALYSMVALFISSRMTD
                     AIFVKQKRMQAMIITNHPERVIKKIHKKLNRGVTIINGAEGAYNHEQKTILITIITRA
                     EFNDFKHIMKKADPKAFVSVADNVNIIGRFVESD"
     gene            complement(1558..3309)
                     /gene="aspS"
                     /locus_tag="U1021_001180"
     CDS             complement(1558..3309)
                     /gene="aspS"
                     /locus_tag="U1021_001180"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEM4711726.1"
                     /translation="MKRSMYAGRVRKEHVGQEITLKGWVGRRRDLGGLIFIDLRDREG
                     IMQLVINPESVEAEVMAKAESLRSEFVIEVTGTVVEREQANDNIPTGAVELQVTSLTV
                     LNTAKTTPFEIKDGIEASDDTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDDLEF
                     IDVETPMLTKSTPEGARDYLVPSRVSKGHFYALPQSPQITKQLLMNAGFDRYYQIVKC
                     FRDEDLRGDRQPEFTQVDLETSFLNEVEIQDIVEGLIAKVLKDTKGIDVTLPFPRMAY
                     DHAMNFYGSDKPDTRFEMLLQDLTELVKEVDFKVFSEAPVVKAIVVKGAADSYSRKDI
                     DKLTDYAKQFGAKGLAWVKVDKGELAGPVAKFLTGITEKLTASLQLEDKDLVLFVADE
                     LEVANNTLGALRNRLAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPT
                     EETAHHLDGDLAQVRAVAYDIVLNGYELGGGSLRINQKDMQEQMFKALGFSAEDAHEQ
                     FGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFPKNNKASDPMTQAPSTV
                     ASAQLEELALDITLENE"
     gene            complement(3405..3857)
                     /locus_tag="U1021_001181"
     CDS             complement(3405..3857)
                     /locus_tag="U1021_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4711727.1"
                     /translation="MKWEIKTFEQLSLHELYTILTLRTDVFVVEQACPYPEVDGKDPN
                     CLHLLGTDEGELVAYLRILPAGISYDEVSIGRVVIKPSHRGKGLGRPMMEQAIHYITN
                     EWKESQIKIGAQAYLEKFYQSLSFKPVSEVYLEDDIPHLDMLYIKPVN"
     gene            complement(3867..4778)
                     /locus_tag="U1021_001182"
     CDS             complement(3867..4778)
                     /locus_tag="U1021_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM4711728.1"
                     /translation="MQRLGQTGLEVSRIALGCMRMASLSEKETAKVLETVVEQRINFF
                     DHADIYGGGESEIRFAQGAKLAGLKREDLLLQSKCGIRKGYFDFSKEYILESVDGILK
                     RLDTEYLDVLALHRPDALMEAEEVAEAFYLLKKAGKVHHFGVSNQNIYQMELLQSYLD
                     QPLAVNQLQLSPAHTPLIDAGLHVNMKDAAATMRDGGLIDYCQLKKITIQAWSPFLID
                     LQRGIFANHPDYALLNQTIGEIAERYNVSHETIVVAWILRHPAKIQTIVGSMNPERLT
                     KIAQASQITLTRPEWYEIYRSAGNILP"
     gene            complement(4848..5863)
                     /locus_tag="U1021_001183"
                     /pseudo
     CDS             complement(4848..5863)
                     /locus_tag="U1021_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377584.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
     gene            complement(5908..8307)
                     /locus_tag="U1021_001184"
     CDS             complement(5908..8307)
                     /locus_tag="U1021_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HEM4711729.1"
                     /translation="MKYQEIINRLTLEEKAALMSGKSVWETKDYPEKGIPSIFLSDGP
                     HGIRKQEGEGDHLGLNASVPATCFPTAATLANSWDVDLVERVGQGLGAEANSLGVNVI
                     LGPGLNIKRSPLCGRNFEYYSEDPYQAGKLAAAMIRGMQSQGVAATPKHLAVNSQELR
                     RMASDSIVDERTLRELYLTGFEIAVREGNPKVIMSAYNKINGVYANEDKRLLRDILRD
                     EWGFTGFVVSDWGGSNDHVLGVENGSHLEMPGTKKVGQKEIIDAVQSGRLSEQVLNER
                     VDELIDVVLELAHAEKRSVDYSEQHELARQAATESIVLLKNKNQILPLSSETKIALIG
                     EFAQNPRYQGAGSSLINTRQLDKTVDCIADYPLNVIGYEQGYQRVDKENRVLVDRAVN
                     LANQAELVLYYMGLDEMSESEGLDRHHISLPKNQLSLLNALVGTGKKIVVVLSAGSVV
                     DMNWDVDVDAVLHGYLSGEAGARAILDTLTGRVNPSGKLSETYPINLADVPSSDDYPA
                     EGDFSLYKEALYVGYRYFTSLDKTVKYPFGYGLSYTDFSYSQLDVTELGVRVTITNTG
                     LVDGAEIVQLYVGKEVRQIYRPAKELKGFKKVYVKAGESKQIFIPFEDYTFRYFNKET
                     GQFEVEAGNYLLYVGASSQDIRLVGEITREGTVDQFPASEQIPTYLTAQVQAVSEQDF
                     AQLLGRPVPEETWKIGQELSLNDPVLKLQFAKSGLARGVHKLLAGLLKKAEQKGTPDL
                     NLLFLYNMPFRAMAKMTGDMLDLPMVEGILTIVNGNFFKGLGQLWRAYQAKRKYQKQL
                     S"
     gene            8703..9740
                     /locus_tag="U1021_001185"
                     /pseudo
     CDS             8703..9740
                     /locus_tag="U1021_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736581.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
     gene            complement(9779..11125)
                     /locus_tag="U1021_001186"
     CDS             complement(9779..11125)
                     /locus_tag="U1021_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEM4711730.1"
                     /translation="MKKKIVLLLGAIAVIVLIWSAIAGQRQQSYAEAELRDQDKIWII
                     TDLHHLSQDLFDDGEAFSHIEKTAAGKDLRYGKERMEALVEQVEREHPSLLLVSGDLT
                     LNGEKQSMIELEQYFTRIEEKGTEVLVIPGNHDVSSGWARTFKGDQQIVTDQVTAQQF
                     AELFAHHGYQQASSRDKASLSYLAKPFSNAWFLMIDSNIYSDGYGKGAPPTNGRIKKE
                     TLDWIEVQLKSAKEAGVSLIPVVHHNVLQQHAMLSKGYTLDNAADLKTLFNQYGIQFG
                     FSGHTHSQNIVKEDLGNVIYTEVVNGAFSIYLAIIGQLSLDDTSIHYQKTQLDMASWA
                     EKHQPSDPNLQDHVTYLQTVFDNTSDIMVHNVLNDERWYDGETADDISQFIMPANRAY
                     FSGEKLDQTWLDEKVFSSQAYQTLQAASPRSFLADYLDVIIKRSQSRDVEQVTVSK"
     gene            complement(11211..12728)
                     /locus_tag="U1021_001187"
     CDS             complement(11211..12728)
                     /locus_tag="U1021_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavocytochrome c"
                     /protein_id="HEM4711731.1"
                     /translation="MKKKAWLGLLMSLLAVLFLVACGGKSEKTATSSSSTTSSSSEEA
                     VSGASEKVYTDPSELKDSYDVIVVGSGGAGMSAAISAKDAGASVALLEKMPVIGGNTA
                     KSSAGMNASQTKFQEAEGIADTNDKFYEETLKGGKGTNDPELLRYLVDNSASAIDWLD
                     GMGITLSNLTTTGGMSEKRTHRPADGSAVGGYLVNGLYHNLVERKVPIFVNADVTKLQ
                     DKDGAVTGVEVKIAGETKQISAKAVVLATGGFGADLEMVAKLNPALKGYVTTNQEGST
                     GDGIALAESEGAATVDMEQIQIHPSVEQETSYLITEAVRGEGAILVNSKGERFVNELE
                     TRDKVSAAINSLEPNYAYVIFDDALKDRVKAIAQYEEKGLVKTGATLADLAKEIGVPA
                     DTLQTTLDTWNKAVADKNDAAFGRTSGMDHALNTGSYHAIKVAPGVHHTMGGVKINTN
                     TEVLKTDGSAISGLYAAGEVTGGVHGQNRIGGNAVADIIVFGRQAGEQAAGFAKK"
     gene            complement(12863..13312)
                     /locus_tag="U1021_001188"
     CDS             complement(12863..13312)
                     /locus_tag="U1021_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol reductase thioredoxin"
                     /protein_id="HEM4711732.1"
                     /translation="MWRKYFLLVLLAILVVGGAFFLSQSAATPNESDYVKAVKSYQAI
                     SIDEVEQKVQDEEEFILYIGRETCPYCRDFVPKLTEVVERSRATIYYLDSESDPNGKI
                     QQFRQSQGLATVPSLTYYKSGKLSGILRKGSQATISEIASFLSLQGQ"
     gene            complement(14297..14728)
                     /locus_tag="U1021_001189"
     CDS             complement(14297..14728)
                     /locus_tag="U1021_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1492 domain-containing protein"
                     /protein_id="HEM4711733.1"
                     /translation="MTIEELKQRLEGIKWIDKEISQLYLELQYLETGLFKQTTLTQAR
                     VQTSRVNSSESQLVAQLAIKENITNRIDRLTKERLELISMIDTLRNPKYRLALNLYYI
                     QQKVDLEAGEIMNVSKTTFFRYLKLALTELADLITHAEKEK"
     gene            complement(15350..15931)
                     /locus_tag="U1021_001190"
     CDS             complement(15350..15931)
                     /locus_tag="U1021_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711734.1"
                     /translation="MTLQTFSDTPNTFTFNYTFKDFDTAQVAGHALMGYVTGTFEQPA
                     IEVHYKSDKVGGDYNRLAVEYVADTELTEVFQRICESFQDYYNNPDELTSGDLNEYEQ
                     EQEIEQEYTRQRVEQLKQSENFESLLERVVAYELELLDYAERLLSDDPIPMDSETGYL
                     TLDLIGAKGVGLFKSLDEDNEYSGLAYYNAEAE"
BASE COUNT         4543 a         3733 c         2880 g         4842 t
ORIGIN      
        1 tcctaaatat ttttcataat ctccttaaaa ctcatcggtc acgctggtga gtttttttgt
       61 gtgaccaaaa aaacaaccca gcataaagct gagttgaggc tctttacatc aattccatta
      121 tcttccgacc aatgcgttca atgtcattct gcatccctct gagttcaaag gtgtctataa
      181 caggaaaatt aaatcgctca gcatattgct tagcagtcag acaatattgg ttgttaaaat
      241 tacggttgcc tgagccaacg acacccagac agagctctgc attggtcccc aaagcgataa
      301 aatctccgag aggattggtc agaatttcca catctccgtt gtccactcca tttccacctt
      361 ctaagtaggt tggtaaaaag gcgacaaagg gtgcatctag ctgatagaaa ggaatatcct
      421 gcttgaccaa atctttaaca tggaccagct caatctccca gtcagtttga aattggaaaa
      481 aggactttag acgtttcaca aaactctctg tattgccact caaactgatg taaaccaaat
      541 atattttctt cttcatacat ttcctcttta taataaaaac actacatgta gactgtaaat
      601 actattttac tcctacatgt agtgtttgtc aatcagtcac tttccacaaa ccgaccaata
      661 atattgacgt tgtcagctac cgatacaaag gctttggggt ctgccttttt cataatatgc
      721 ttgaaatcat tgaactctgc acgagtgatg atggtaatga gaatcgtctt ttgctcatgg
      781 ttataagcac cctcagcacc gttgataatg gtcacaccgc gattgagctt cttatggatt
      841 ttcttaatga ctcgttcagg atgattggta ataatcatgg cctgcatccg tttttgtttc
      901 acgaaaatcg catctgtcat gcggctggag ataaacagcg caaccattga atacagggca
      961 tattgccagc caaaggtcat ccctgcaatc aacataatca taatgttgac aatcaaggaa
     1021 atggagccaa cttgacgtcc cgtcttcttg cgaataataa tagagacaat atcagtacca
     1081 ccactggata cattgttcct aagcgcaaat ccaattccag ttcccagcat gagaccacca
     1141 aaaatagcat ttactaacgg atccgtcgtc agggtaactg gcggcataaa ttggataaag
     1201 aaagaactga aggataccgt aataaaggta aagatagtaa atttataacc aattttatac
     1261 caagctaaga taagcaaggg aatgttcagg ccgtagtaga ccaccgcaat cggtacattc
     1321 caaccagcgt aagaagctgc cagagcagaa acaatctgtg caagaccagt aactccagac
     1381 gaatagacat tccctggtcg aaagaaaaaa ttgactgcaa tactagatag gagtccataa
     1441 ataatggacc ccgatatccg ttcagcatat ttttcccgag aaattcccaa aatgaccgac
     1501 caaaacttat tctttctggc ctttcttaaa aagcgtacac gctgttttct gaaaaattta
     1561 ttcattttca agtgtaatgt ctaaagccaa ttcctctaat tgagctgatg caaccgtact
     1621 tggtgcctgt gtcatcggat cagatgcctt gttattcttc ggaaaggcga taacttcacg
     1681 aatgttatcc tcaccagcca ataacatgac aaagcggtcc aacccgatag ccaatccacc
     1741 gtgtggtggg aaaccgtagt ccatagcttc tagcaagaaa ccaaactgct catgggcatc
     1801 ttcagctgag aaaccaagag ccttgaacat ctgttcttgc atgtcttttt ggttgatacg
     1861 aaggctaccg ccacccaatt cataaccatt caaaacaata tcgtaggcaa ctgcacgcac
     1921 ctgcgccaaa tcaccatcca aatgatgagc tgtttcttcc gtcggcaagg tgaatgggtg
     1981 atgggcactc atatagcgac cttcctcttc agaccactca aacattggcc aatccacaat
     2041 ccagaggaag ttgaacttgc tttcatcaat caagccttgc tcttttgcca agcggttacg
     2101 caaggctccc agggtattgt tggctacttc caattcatct gctacaaaga gaaccaaatc
     2161 cttgtcttcc aactgtaaac ttgctgtcaa tttttctgta atacccgtca agaacttagc
     2221 aactgggccc gctaattctc ccttgtctac tttaacccaa gcaagtccct tagcaccaaa
     2281 ttgttttgcg tagtctgtta atttatcaat gtctttacgt gagtagctat ccgccgcacc
     2341 cttgaccaca atggctttga caactggtgc ttctgagaag accttgaagt caacttcctt
     2401 gacaagttct gtcaagtctt gcaaaagcat ctcaaaacga gtatctggtt tatctgaacc
     2461 gtagaagttc atcgcatggt cataggccat acgtgggaat ggcaaggtca catcaattcc
     2521 tttggtatct ttcaagacct tagcaatcaa gccttctacg atgtcttgga tttcaacctc
     2581 attcaagaat gaggtttcca agtcaacctg tgtaaactca ggttgacgat ccccacgcaa
     2641 atcttcatca cggaaacact taacgatttg gtagtaacgg tcaaaaccag cgttcattaa
     2701 aagctgctta gtaatctgtg gactttgtgg caaagcatag aaatgacctt tggacacacg
     2761 agatggtacc aagtagtcgc gcgcaccttc tggtgttgac ttggtcaaca ttggtgtttc
     2821 cacatcgata aattccaaat cgtccaagta gttgcgaatg ctgtgggtta cagccgcacg
     2881 taatttgaag ttgttgagca tttctggacg gcgaagatcc aaataacggt aacgaagacg
     2941 ggtatcatca ctggcttcaa tgccgtcctt gatttcaaac ggagttgtct tagccgtgtt
     3001 caacactgtc aagctggtta cttgcagttc aacagctcct gtcgggatat tgtcgttagc
     3061 ttgctcacgc tccacaaccg ttcctgttac ttcgataaca aactcggaac gaagactctc
     3121 cgcttttgcc atcacttcag cttcaactga ctcagggtta atcaccaatt gcataatgcc
     3181 ttcacggtca cgcaagtcaa tgaaaatcag gccacccaag tcacgacggc ggccaaccca
     3241 acctttcaaa gtaatttcct gtccgacatg ctccttacga acacgtccag cgtacataga
     3301 acgtttcatt ttcttcctct tttactgatt ttatacctat tcattctacc ataaaatagc
     3361 tgatttttgg gagaaattgc cgagaaaaaa tcgaaaaacc agccctagtt gactggtttg
     3421 atgtatagca tatccaaatg cggaatatca tcctccaaat atacttcaga aactggctta
     3481 aagctaagtg attgatagaa tttttctaaa taggcttggg caccgatttt aatctgactt
     3541 tctttccatt catttgtaat gtaatggata gcttgctcca tcattggccg acccaatcct
     3601 ttaccacgat ggcttggctt gatgaccaca cgaccgatgg aaacttcatc ataacttata
     3661 ccagccggca atattctcaa ataagccact aactctcctt catcagttcc caaaagatga
     3721 agacagtttg gatcctttcc atcgacttca ggatagggac aagcttgttc tacaacaaag
     3781 acatcggtcc gaagtgtcaa gatagtgtaa agttcatgta aactaagttg ttcaaatgtt
     3841 tttatttccc acttcataca ttcctcctag ggcagaatgt tccctgcact tctgtaaatc
     3901 tcataccatt ctggtctcgt taaggtaatc tggctcgctt gagcaatctt tgtcaagcgt
     3961 tctgggttca tagaacccac aatcgtttga atctttgctg gatgacgcaa aatccaagct
     4021 acgacaattg tttcatgtga aacattgtat cgctctgcta tttccccaat ggtctgattt
     4081 aaaagagcat agtcaggatg gttggcaaaa atacctcgtt gcaaatcaat caagaaagga
     4141 gaccaggctt ggatagtgat ttttttaagc tggcaataat caatcagccc accatcacgc
     4201 atagtcgcag cagcatcttt catattgaca tgtagtccag catcaatcaa aggcgtgtga
     4261 gcaggagata gctgtaattg attaactgca agcggttgat cgagatagga ttgtagtaac
     4321 tccatttggt aaatattttg gttgctgacg ccaaaatgat gaaccttccc tgcttttttc
     4381 aagagataga aggcttctgc cacttcctct gcttccatta gagcatccgg acggtgtaag
     4441 gcgagaacgt ctaaatattc cgtatccaag cgcttcaaaa tcccatccac agattccaaa
     4501 atatactctt ttgagaaatc aaaataacct ttacgaatgc cacattttga ttggagaagc
     4561 aggtcctcac gtttcaatcc cgccaatttt gccccctgag caaaacggat ttctgattca
     4621 ccaccaccat aaatatccgc atgatcaaaa aagttgattc tttgctcaac cacggtttcc
     4681 aataccttgg ctgtttcctt ctcgctcaaa cttgccattc gcatacagcc taaagcaatt
     4741 cgtgaaactt ctagacctgt ttgtcctaat ctttgcattt atcttctcct ttgtaaacgc
     4801 ttttcatatt ccttattata acagaaaaac tcagccgaaa ctgagtttta gttaaaacca
     4861 taaattcttt tcgcgatttt atagacggca ttggaaattt ttcgacctgg gtaaccgtaa
     4921 aggttggtta attgcccgag taaccctttt cgaacgattt taaatagagc tggattatta
     4981 tcccgaatat agtgccagag ttcctgcttt ttcatcatat gttcagctgt tccagcacga
     5041 ttgagaagag cacaggagat aatggtcgta atctccacat gattgagcaa ataacttcgt
     5101 aaatcaggat tgtcaatcgc ctccaagtct aaattatcta ccaaaattcg attgactttt
     5161 aactgctggt caatgcgctt aatcatgacg gattcattga cagactggtc atttcgccca
     5221 ataaagtaac gataaaaatc tactggcaga tagaacatag ttttcacagc ctgcaaagga
     5281 gtaaatacga aaatattatc cacatagaag gtatgctctg gcagaacgag accaacctca
     5341 cgcaataaat ctgtcctgta aatcaaggaa tgcatcatca tgtattgccc cttggaaaag
     5401 gcatccacat cttcccagcc aaaaatccga ttttctggta aaacatcctg ataagacatg
     5461 gattttttac gagattgtcc ctctttttcg taaacaaagt tggagataaa ggcatcaact
     5521 ggcgtatttt catcttccaa agcctgcaaa ctctctagga tcttcaaata ggccctggta
     5581 tcgacccagt catctgaatc tacaacttta aagtacttcc ccttggcctc acgtatccct
     5641 gtattaacag ctccgccatg gcccttattg tcctgataaa tggcacgtac gtttgaaaat
     5701 tgatcctcta gagcccctct gcgatttcct gagtccgatc ggtcgacccg tcgttaataa
     5761 tcagaatttc aaccttgtca ccgcccatta caagggaatg aacacagtaa tgaaggtagg
     5821 cttccgaatt atagctcggt atggcaatgc ttagtaaggt catctttctc tccatttgac
     5881 acaatttgtt actattttat cacattttca ggaaagttgc ttttgatatt ttctttttgc
     5941 ttgataggct ctccatagtt ggcctaagcc cttgaaaaaa tttccattga caatggttag
     6001 aatcccttcc accatcggta aatcgagcat gtctcctgtc atctttgcca ttgccctaaa
     6061 tggcatatta taaaggaaca gcaggttcaa gtcaggagtc cctttctgct ctgctttttt
     6121 cagtaagcca gccaacagtt tatgcacgcc acgtgccaac ccactcttcg caaattggag
     6181 tttcaaaact ggatcgttca ggctcagttc ttgaccaatt ttccaggttt cttctggaac
     6241 tggacgtcca agcaattgtg caaaatcctg ctctgaaaca gcctgcactt gggctgtcag
     6301 ataagtcgga atctgttctg aagcaggaaa ttggtctaca gtgccttctc gagtaatctc
     6361 gccaactaag cgaatatcct gactacttgc acctacatac aagagataat ttccagcctc
     6421 tacttcaaat tggcctgtct ctttattaaa ataacgaaac gtatagtcct caaaaggaat
     6481 aaaaatctgt ttggactcgc ctgcttttac atatactttt ttaaagcctt ttaactcctt
     6541 tgcagggcgg taaatctgac gaacttcttt gcctacgtac aattggacaa tttcagcacc
     6601 atcaaccaga ccagtatttg taatagtgac tctgactcct aattcggtca catccaattg
     6661 actgtaagaa aagtctgtgt aggacaatcc ataaccaaag ggatacttga cagtcttgtc
     6721 aaggcttgta aagtaacggt agcctacata gagagcttcc ttatagaggg aaaaatcgcc
     6781 ttccgctgga tagtcatccg aagatggaac atctgcaaga ttaataggat aggtttcgct
     6841 tagttttcct gatgggttga cacgtcctgt caaggtatct aaaatggctc tggcaccagc
     6901 ttctcctgat agatagccgt gaagaaccgc atctacatcc acatcccaat tcatatccac
     6961 aactgagcct gctgatagga caacaacgat ttttttacct gtccctacca aggcattcag
     7021 taaggataac tggtttttag ggagacttat atgatgacga tccaagccct cactttcact
     7081 catttcatct agccccatat agtaaagaac aagttccgct tggtttgcaa gattgacagc
     7141 cctgtcaact aacaccctgt tttctttatc tacacgttga tagccttgtt cgtaaccaat
     7201 gacatttaat ggataatctg cgatgcaatc cactgtttta tctaattgtc ttgtattgat
     7261 taaagaagaa cctgctccct gatagcgagg attttgggca aattctccga tgagagctat
     7321 ttttgtctca ctagataagg gcaagatctg attcttattt tttaatagca caatgctctc
     7381 agtggcagcc tgacgggcca attcatgttg ttcagaataa tctacagatc gtttttcagc
     7441 atgagccaac tctaaaacta catcaatcag ctcatccacg cgctcattca atacctgctc
     7501 ggatagacga ccagactgaa cagcgtcaat gatttccttt tgaccgactt ttttagtacc
     7561 tggcatttcc aaatgactac cattttcaac accgaggaca tggtcattag agccacccca
     7621 atccgatacg acaaaacctg taaagcccca ttcatcacgc agaatgtcac gcaagaggcg
     7681 cttgtcttca ttagcataga cgccgtttat tttgttatag gcagacatga ttacctttgg
     7741 atttccttca cgcacagcaa tctcaaatcc tgtcagatag agctctctca gcgtgcgctc
     7801 atctacaatg gagtctgaag ccatacggcg caattcctga ctgtttacag ctaaatgctt
     7861 tggcgttgcc gcaacacctt gcgactgcat tcctcggatc attgcggccg ccagttttcc
     7921 cgcttgatat ggatcctctg aataatactc aaagtttcga ccacataagg gactgcgctt
     7981 gatattaagc cccggcccca aaatgacatt gacacccaag ctatttgctt ctgcgccaag
     8041 accctgtccg acacgttcaa ccaggtccac atcccaagaa tttgccaagg tagcagctgt
     8101 tgggaaacaa gttgcaggga cagaggcatt cagccctaag tgatcacctt caccttcttg
     8161 cttacgaatt ccatgtggtc catcagacaa aaagatagat ggaattcctt tttcagggta
     8221 atcctttgtt tcccaaacag attttcctga catgagagct gctttttctt ccaatgttaa
     8281 acgattaata atctcctgat acttcatcat cttttcctca ttctatttct ttatcactat
     8341 catatcagac taaagggaca attaaaacgc tttcttcata atctgtatga ttttggacat
     8401 aatctgctat aaaaaatctc cccagaaaat actagggaga tcgctcctat tacttcttat
     8461 actcaatgaa aatcaaaatc aggctagctc caacagtctg agaatagact gttggaggtg
     8521 ggagatagga cgaacctagt tcgtttctat atgagcagat agaactctgt cgctttatta
     8581 ttgtcaagcg acaggctgga aacctccact ggagctttcc actcatcaaa tcaagtcaac
     8641 aacggctgag tttgattttc gaagagtatt atttcatgat tacaaacttc atcattggat
     8701 agttgacagc aaaagccttt atcattgccg aattagtagc ctccattact tggcatctct
     8761 actgtttgac gatttatcaa caagctgtgg ataacttgtg gacacagggg ttatttctgt
     8821 tgataacttc tctactttcc tattggctca tctatcttca agatcaaaaa gtacgcttag
     8881 aagaattgga taaattcatt gagcagcgag atgttactgt agccgtcttt acaaccttat
     8941 ctatctttgt tctcagtaat attggcctca tcctctcagg cacacgccaa tttcaagact
     9001 caaccagcat tttcatcctt cggacaaccg tcaatctctc tggtcttcta ctcctattca
     9061 cccaagaatc tcaacaatac gatcgctatt tacggcagga attgacttct atcaataata
     9121 tgtttcaact tcaatataag caataccaag cctatcgtga aaatagtgag attcttgacc
     9181 gtaaggtcca tgatttaaag catcaactga ccatcattca gcaagaatcg gataaaacca
     9241 aaaaggagca atacctagag gaaatgagcg aggtgatcca aacccttgat gccaagattg
     9301 aaacaggaaa tcccgttcta gataccattc tcagccagaa aaattactac tgtttgcaaa
     9361 atggaatcaa ctttacctgt attgttcagg gagaacccct ccattttatg gatgtaatgg
     9421 atatttcagc tctgtttgga aatgccatcg acaatgccat cgaggctgtg gaaaaaatag
     9481 acaatcctga acaacgcttg attactttaa aggttgccag ccatcagcaa tttctcatca
     9541 tccgattaga caactacgat acttcttcac ttgacttatc cacaggacag ctccctgcaa
     9601 catcaaaaac aaataaggac taccacggat ttggtcttaa gagtatggag tatgttgcca
     9661 ataaatacgg tggcaatctc acacttagca aggaagataa ttgggttcaa ctaaaaatca
     9721 ttctcccttt acaagcatag aaaaatcccg tttgaaggcg ggattttctt tctattcatc
     9781 atttagaaac cgttacttgc tccacatctc gactttgact ccgttttata atcacatcaa
     9841 gataatcagc caagaaactt ctcggtgatg ctgcttgcaa ggtctgataa gcctggcttg
     9901 aaaatacctt ctcatctagc caagtctgat ctagtttttc tcctgaaaaa taagcacggt
     9961 tggccggcat gataaattgt gaaatatcat ctgccgtctc gccgtcatac caacgctcat
    10021 cgtttaacac attgtggacc atgatgtcac tggtattgtc aaagacagtt tgtaagtagg
    10081 taacgtgatc ctgcaaattt ggatcactag gttggtgctt ttctgcccac gaagccatat
    10141 caagttgagt tttttgatag tgaatgcttg tatcatcaag gctcaattga ccgataatag
    10201 ctagataaat agaaaatgct ccattgacca cttctgtata gatcacattc cccaagtctt
    10261 ccttaacaat attctgagaa tgagtgtgcc ctgaaaaacc aaattgaatg ccatattgat
    10321 tgaacaaggt cttcaaatcg gcagcattat ccaaagtata gccttttgag agcatggcat
    10381 gctgttgcaa gacattgtga tggacaacag gtatcaaact cactccagct tccttagctg
    10441 acttaagttg tacttctatc caatccaagg tctctttttt gatacgtcca ttggttggag
    10501 gagctccttt tccgtagcca tcagagtaga tgttgctgtc tatcatcaga aaccaagcat
    10561 tggaaaatgg tttggccagg tagctcaatg aggctttgtc acgactgcta gcttgttgat
    10621 aaccgtgatg ggcaaatagc tctgcaaatt gctgagcagt gacctgatcc gtcactatct
    10681 gctggtctcc cttaaaggtc ctagcccatc cactggaaac atcatggtta ccaggaatca
    10741 ccaaaacctc cgttcctttt tcttcaatcc gggtaaaata ttgctccaac tcaatcatgc
    10801 tctgcttttc accgtttaga gtcaaatccc cactgactag taacaaggaa ggatgttcac
    10861 gctcaacctg ctcaaccaaa gcctccatcc gctcttttcc ataacgtaaa tccttaccag
    10921 cagctgtttt ttctatatgg gaaaatgcct ctccatcatc aaataaatcc tgtgacaaat
    10981 gatgcaaatc agtgataatc cagattttat cctggtccct taattcagcc tcggcatagg
    11041 attgctgacg ctgaccagca atagcagacc aaatcaaaac aatgactgca atagctccta
    11101 acaataatac tattttcttc ttcatacctt agaagtatat catcttagag atagagggac
    11161 aagaaaaaga agctcgacct tctttctgcc gagcctctta tgtctacaat ttatttctta
    11221 gcaaatccag ctgcttgttc accagcctga cgaccaaata cgatgatgtc tgctactgca
    11281 ttaccaccaa tacggttttg accatgaaca ccaccagtta cttcaccagc agcataaaga
    11341 ccagaaattg ctgaaccatc tgttttcaat acttcagtat tggtattgat tttcacacca
    11401 cccattgtat ggtgaacacc aggtgcaact ttaatcgcgt ggtaagaacc agtattcaaa
    11461 gcatggtcca tacctgatgt acgaccaaat gccgcatcat tcttatctgc tacagccttg
    11521 ttccaagtat caagtgttgt ttgaagtgta tccgcaggta caccaatttc tttagccaaa
    11581 tctgcaagtg tagcccccgt ttttacaaga cctttttctt cgtattgagc aatcgccttc
    11641 acacgatctt tcaaggcatc atcaaagata acataagcat agtttggctc caagctattg
    11701 atagccgcag aaactttatc acgagtttcc aattcgttaa caaaacgctc accttttgaa
    11761 ttgacaagga tagcaccttc accacgaaca gcttctgtaa tcaagtaaga agtttcttgc
    11821 tcaacacttg ggtgaatttg gatttgttcc atatcaacag ttgctgcacc ttctgattca
    11881 gcaagtgcaa taccgtcacc tgttgaacct tcttggttgg ttgttacata acctttcaat
    11941 gctgggttta atttagcaac catttccaaa tcagcaccga aaccacctgt cgccaataca
    12001 actgctttag ctgagatttg cttcgtttca ccagcaatct tcacttcaac acctgtcact
    12061 gctccatcct tgtcttggag ttttgtaaca tctgcattga caaaaattgg tactttacgt
    12121 tcaacaagat tgtggtaaag accatttacc aagtagccac caacagctga accatctgct
    12181 ggacggtggg tacgtttctc gctcatacca ccagttgtag ttaggttgct aagagtgatc
    12241 cccattccat ccaaccagtc aattgcacta gcagagttat ctacaagata acgaagcaat
    12301 tcaggatcgt ttgtcccttt accaccttta agcgtttctt cgtagaattt atcgtttgta
    12361 tcagcaatac cttccgcttc ttggaattta gtctgtgaag cattcatacc agctgatgat
    12421 ttagccgtat taccaccgat aacaggcatt ttttccaaga gagcaacact agcaccagcg
    12481 tctttagctg agatagctgc cgacatacct gcaccacctg aaccaacaac gataacatcg
    12541 tagctatctt tcaactcaga tggatctgta taaactttct cagatgcacc tgaaacagct
    12601 tcttctgatg aagaagaagt cgtagatgat gaagatgtag ctgtcttttc agacttacct
    12661 ccacacgcca ctaaaaacaa aacagcaagt agactcatca acaagcctaa ccaagctttc
    12721 tttttcatga taaacctcca atttttatct gatattacta ttatacaaga ttgtgaaatg
    12781 tttttcaatt tgttttgaaa tattttcaca aacatgaaca aaaaaatgta tgattcaaac
    12841 atcacacatt ttatatagct atttactgcc cttgaagaga taaaaagctc gctatttcgg
    12901 atattgttgc ttggctccct ttacggagta ttccagataa tttacctgat ttatagtagg
    12961 ttaagctagg aaccgtagca agaccttgac tctgtcgaaa ttgttgtatt tttccattcg
    13021 gatccgactc gctatctaaa tagtagatag tcgcacgtga tcgctctact acctctgtta
    13081 atttcggaac aaaatcacga caataagggc atgtctcacg acctatgtat aatataaatt
    13141 cttcctcgtc ttggaccttt tgctccactt cgtctatcga aatagcctgg taactcttta
    13201 cagccttcac atagtctgat tcatttggcg tagccgctga ttgagataga aagaaggccc
    13261 cacctacgac caaaatagct aatagcacta gcaaaaaata cttacgccac ataatccctc
    13321 ctcaaataca gacaaaaagc ccttgtaaat agggctttta aaatatcgat acaaatctta
    13381 gagcattttg ttgtacagtt aagattactt agctttacac gttctttaca ctccctaacc
    13441 cctgatttga tgggctttct aactaaataa cttataatta gacagtgtta aatatccccc
    13501 aaaagttcgc caaaagggga gcaaaaaagg gcctttcagt agccctaagt tatgagttca
    13561 gcaggcaaga aactagcacc gccccaaggt gcttttttag ttccctggta tcttgctgat
    13621 actattgtat caaaaagcac gcgcttatat tctgttatct tcacaatttg atacttttgt
    13681 taagttatct tgcttacctt cgtttctatc ttccaatatt ggccgttttt ccaagatagc
    13741 gcgtgatcat gtattttcag actcgcataa ccttcccaaa acctttacat tatcaaaact
    13801 tttaaaaagg gaaaattgta ctcgaaaaag ttcggcgttg tagccccttg gccaaaccta
    13861 cccccgttct aaaaatgagg ggactaatca caacctttac tatatcctac tgtgttttac
    13921 tgtatccact agtattgtgt tactaatcct atgattttac aaaatcgttt gctgttcgca
    13981 ttatacgctc tttgaaacta gccaaaacgt aacgcttttt gttaggatta accccatttt
    14041 gttaggattg tgttaccctt tgggagactt acaaccctct aaaaactcaa taataccaat
    14101 ggttttagct gtttttaccc cctttagaat ttttggcgtg agaaaaaaat gtacaatgac
    14161 ggcgtgaagg tcggacgtgt acccatggta ggttagtccc ccccgcattc taaaaggcct
    14221 ctagctccgt ttctaaagga ctgatttaat ccctggctta tttatcggac aagctcaaac
    14281 acgcgccaaa acatggctat ttttctttct ctgcatgagt tatcaagtca gctagctcag
    14341 taagtgctaa ttttaaatat ctaaaaaatg ttgtcttact aacattcatt atctcccctg
    14401 cctccaaatc cactttttgt tggatatagt aaaggtttaa agctagacgg tatttaggat
    14461 ttcttagtgt gtcaatcatg ctaatcagct ccaggcgctc cttagttagc ctgtcaattc
    14521 tgtttgttat gttctcttta attgctagct gggcaactaa ctgactttca gaactgttta
    14581 ccctgctagt ctgtaccctg gcctgcgtta gtgttgtctg cttgaatagt ccagtttcca
    14641 agtattgaag ctccaggtaa agctgactga tctctttgtc aatccactta ataccctcta
    14701 acctctgctt cagttcctct atggtcattg ttacccctcc tatggtaaaa taagcttgtt
    14761 gaaacttctt accctgcgtg tgtctcgtgg ggctttttta tgcctaaaat tctgtaacta
    14821 cccgcgcgtg ttcttttgtt cgtccatggt tcaatgggct gttttatctt tgttcactct
    14881 ctgttcaatc acgcgccacc gtgtctaaac attatttctt ttagactgcc gaaaatgcca
    14941 aatacctccc cggaatctcc ctatttttta cttatccaac ctagcctaaa cctaatcatt
    15001 ctcattcatt taattttaag ggttatatag cgttcggata ttcgtcgttt tgaaaaatca
    15061 aaaaacgttc cgtatttttg caccctttca accctgtgaa tgcttgatag tgctagcttt
    15121 ttagccccaa ccgttccgcc tttatttgtt tggtaaagcg aacgtttgta gtattcgttt
    15181 gttttggaaa ttgctaaagt acttcaaccc tatagcaatt tcaaacttag gttttcttag
    15241 tattgcctat atagatttga ttgtagtatt ttgtagtatc ttatatctgt tttcatctga
    15301 ggttttttga ggtttacgaa acagcaaaag aggcgtttgc ctctctctgc tattctgcct
    15361 cagcgttgta ataagcaagc ccgctgtatt cgttgtcttc gtccagtgac ttgaatagtc
    15421 ctaccccctt agcgccaatt aagtctagtg ttaagtagcc tgtttctgaa tccattggaa
    15481 tagggtcatc actcagcaaa cgttccgcat agtccagtaa ctccagctca taagccacca
    15541 ccctttcaag caagctttca aagttctctg actgcttgag ttgttccacg cgctggcggg
    15601 tgtactcctg ttcaatttcc tgttcttgtt cgtattcgtt caagtctccg cttgttaact
    15661 catcaggatt gttgtagtag tcttggaaac tttcacaaat ccgctggaat acttcagtaa
    15721 gttcagtgtc tgccacatat tccaccgcca aacggttgta atctccgccc actttgtcac
    15781 tcttataatg cacttcgata gctggttgtt caaatgttcc tgtcacgtat cccataagcg
    15841 cgtgccctgc aacttgtgcg gtgtcaaagt ctttgaatgt gtagttgaat gtgaatgtgt
    15901 ttggtgtgtc tgaaaatgtt tgtaatgtca tggtgttatt ctccttgttt tagtttgttg
    15961 attgagtagc gtttgtcctt gattgtaaac gacttgaa
//
LOCUS       DASFQD010000050        15447 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.050, whole genome shotgun sequence.
ACCESSION   DASFQD010000050 DASFQD010000000
VERSION     DASFQD010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 15447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15447
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.050"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            466..774
                     /gene="rpsJ"
                     /locus_tag="U1021_001191"
     CDS             466..774
                     /gene="rpsJ"
                     /locus_tag="U1021_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003046044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEM4711735.1"
                     /translation="MANKKIRIRLKAYEHRTLDTAAAKIVETATRTGAQVAGPVPLPT
                     ERSLYTIIRATHKYKDSREQFEMRTHKRLIDIVNPTQKTVDALMKLDLPSGVNVEIKL
                     "
     gene            987..1613
                     /gene="rplC"
                     /locus_tag="U1021_001192"
     CDS             987..1613
                     /gene="rplC"
                     /locus_tag="U1021_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002986659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEM4711736.1"
                     /translation="MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETD
                     GYAAVQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNIEGLEVGQEITVETFAA
                     GDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKGKNLAG
                     RMGGNRVTIQNLEVVQVVPEKNVILIKGNVPGAKKSLITIKSAVKAGK"
     gene            1638..2261
                     /gene="rplD"
                     /locus_tag="U1021_001193"
     CDS             1638..2261
                     /gene="rplD"
                     /locus_tag="U1021_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012677212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEM4711737.1"
                     /translation="MANVTLFDQTGKQAGEVVLNDAIFGIEPNQAVVFDVIISQRASL
                     RQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLP
                     QKVRRLALKSVYSEKVAENKFVAVNSLEFTAPKTAEFAKVLAALSIDSKVLVILEEGN
                     EFAALSARNIPGVKVATATTASVLDIANADKLLVTQAAISKIEEVLA"
     gene            2261..2560
                     /locus_tag="U1021_001194"
     CDS             2261..2560
                     /locus_tag="U1021_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007518994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEM4711738.1"
                     /translation="MNLYDVIKKPVITESSMGQLEAGKYVFEVDTRAHKLLIKQAVEA
                     AFEGVKVANVNTINVKPKTKRVGRYVGRTNKVKKAIITLAADSKAIELFATADAE"
     gene            2578..3411
                     /gene="rplB"
                     /locus_tag="U1021_001195"
     CDS             2578..3411
                     /gene="rplB"
                     /locus_tag="U1021_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019790357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEM4711739.1"
                     /translation="MGIKVYKPTTNGRRNMTSLDFAEITTSTPEKSLLVALKNKAGRN
                     NNGRITVRHQGGGHKRFYRLVDFKRNKDGVEAIVKTIEYDPNRSANIALVHYTDGVKA
                     YIIAPKGLEVGQRIVSGPEADIKVGNALPLANIPVGTVVHNIELKPGRGGELVRAAGA
                     SAQVLGQEGKYVLVRLQSGEVRMILGTCRATVGTVGNEQHGLVNLGKAGRSRWKGIRP
                     TVRGSVMNPNDHPHGGGEGKAPVGRKAPSTPWGKPALGLKTRNKKAKSDKLIVRRRNQ
                     K"
     gene            3513..3794
                     /gene="rpsS"
                     /locus_tag="U1021_001196"
     CDS             3513..3794
                     /gene="rpsS"
                     /locus_tag="U1021_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000533767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEM4711740.1"
                     /translation="MGRSLKKGPFVDEHLMKKVEAQANDEKKKVIKTWSRRSTIFPSF
                     IGYTIAVYDGRKHVPVYIQEDMVGHKLGEFAPTRTYKGHAADDKKTRRK"
     gene            3812..4156
                     /gene="rplV"
                     /locus_tag="U1021_001197"
     CDS             3812..4156
                     /gene="rplV"
                     /locus_tag="U1021_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018371349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEM4711741.1"
                     /translation="MAEITSAKATARTVRVSPRKSRLVLDNIRGKSVADAIAILKFTP
                     NKAAGIIEGVLNSAIANAENNFGLEKANLVVSEAFANEGPTLKRFRPRAKGSASPINK
                     RTAHITVVVAEK"
     gene            4169..4822
                     /gene="rpsC"
                     /locus_tag="U1021_001198"
     CDS             4169..4822
                     /gene="rpsC"
                     /locus_tag="U1021_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000529931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEM4711742.1"
                     /translation="MGQKVHPIGMRVGIIRDWDAKWYAEKEYADYLHEDLAIRNFIKK
                     ELADASTSTIEIERAVNKVIVSIHTAKPGMVIGKAGSNVDALRAQLNKLTGKQVHINI
                     IEIKQPDLDAHLVGESIARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGAD
                     IARAEGYSEGTVPLHTLRADIDYAWEEALTTYGKLGVKVWIYRGEVLPARKNTKGGK"
     gene            4826..5239
                     /gene="rplP"
                     /locus_tag="U1021_001199"
     CDS             4826..5239
                     /gene="rplP"
                     /locus_tag="U1021_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003029477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEM4711743.1"
                     /translation="MLVPKRVKHRREFRGKMRGEAKGGKQVDFGQYGLQATTSSWITN
                     RQIEAARIAMTRYMKRGGKVWIKIFPHKSYTAKAIGVRMGSGKGAPEGWVAPVKRGKV
                     MFEVAGVSEEIAREAFRLAGHKLPVKVKFVKREAE"
     gene            5249..5455
                     /locus_tag="U1021_001200"
     CDS             5249..5455
                     /locus_tag="U1021_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006739716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEM4711744.1"
                     /translation="MKLQEIKDFVKELRGLSQEELAKKENELKKELFELRFQAAAGQL
                     EQTARLNEVKKQIARIKTVQSETK"
     gene            5479..5739
                     /gene="rpsQ"
                     /locus_tag="U1021_001201"
     CDS             5479..5739
                     /gene="rpsQ"
                     /locus_tag="U1021_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006738952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEM4711745.1"
                     /translation="MERNNRKVLVGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKK
                     YKAHDENNVAKEGDIVRIMETRPLSATKRFRLVEVVEEAVII"
     gene            5764..6132
                     /gene="rplN"
                     /locus_tag="U1021_001202"
     CDS             5764..6132
                     /gene="rplN"
                     /locus_tag="U1021_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012727667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEM4711746.1"
                     /translation="MIQTETRLKVADNSGAREILTIKVLGGSGRKFANIGDIIVASVK
                     QATPGGAVKKGDVVKAVIVRTKTGARRADGSYIKFDENAAVIIREDKNPRGTRIFGPV
                     ARELRDGGFMKIVSLAPEVL"
     gene            6271..6576
                     /gene="rplX"
                     /locus_tag="U1021_001203"
     CDS             6271..6576
                     /gene="rplX"
                     /locus_tag="U1021_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEM4711747.1"
                     /translation="MFVKKGDKVRVIAGKDKGVEAVVVTALPKVNKVIVEGVNIVKKH
                     QKPNSENPQGAIVEKEAPIHVSNVQVLDKNGVAGRVGYKFVDGKKVRYNKKSGEVLD"
     gene            6600..7142
                     /gene="rplE"
                     /locus_tag="U1021_001204"
     CDS             6600..7142
                     /gene="rplE"
                     /locus_tag="U1021_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEM4711748.1"
                     /translation="MANRLKEKYLNEVVPALTEQFNYSSVMAVPKVDKIVLNMGVGDA
                     VSNAKNLEKAAQELALISGQKPLITKAKKSIAGFRLREGVAIGAKVTLRGERMYEFLD
                     KLVTVSLPRVRDFHGVPTKSFDGRGNYTLGVKEQLIFPEINFDDVDKTRGMDIVIVTT
                     ANTDEESRALLTGLGMPFAK"
     gene            7157..7342
                     /locus_tag="U1021_001205"
     CDS             7157..7342
                     /locus_tag="U1021_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011245027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HEM4711749.1"
                     /translation="MAKKSMIAKNKRPAKFSTQAYTRCEKCGRPHSVYRKFKLCRVCF
                     RDLAYLGQIPGVTKASW"
     gene            7532..7930
                     /gene="rpsH"
                     /locus_tag="U1021_001206"
     CDS             7532..7930
                     /gene="rpsH"
                     /locus_tag="U1021_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009754342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEM4711750.1"
                     /translation="MVMTDPIADFLTRIRNANQAKHEVLEVPASNIKKGIATILKNEG
                     FVKNVEFIEDDKQGIIRVFLKYGPNGEKVITNLKRVSKPGLRVYSKREDIPKVLNGLG
                     IAIISTSEGLLTDKQARQKNVGGEVIAYVW"
     gene            8308..8844
                     /gene="rplF"
                     /locus_tag="U1021_001207"
     CDS             8308..8844
                     /gene="rplF"
                     /locus_tag="U1021_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016399261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEM4711751.1"
                     /translation="MSRIGNKVITLPAGVELAQNNGVVTVKGPKGELTREFPTAIEIR
                     VEGAEVTLHRPNDSKEMKTIHGTSRANLNNMVVGVSEGFKKELEMRGVGYRAQLAGNK
                     LTLAVGKSHPDEVVAPEGITFEVPTPTQIVVSGINKEVVGQTAAYIRSLRAPEPYKGK
                     GIRYVGEFVRRKEGKTGK"
     gene            8933..9289
                     /gene="rplR"
                     /locus_tag="U1021_001208"
     CDS             8933..9289
                     /gene="rplR"
                     /locus_tag="U1021_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018374469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEM4711752.1"
                     /translation="MISKPDKNKIRQKRHRRVRGKISGTAARPRLNIFRSNTGIYAQV
                     IDDVAGVTLASASTLDKEVSKGTKTEQAVVVGKLVAERAVAKGISEVVFDRGGYLYHG
                     RVKALAESARENGLKF"
     gene            9308..9802
                     /gene="rpsE"
                     /locus_tag="U1021_001209"
     CDS             9308..9802
                     /gene="rpsE"
                     /locus_tag="U1021_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEM4711753.1"
                     /translation="MAFKDNAVEIEERVVAINRVTKVVKGGRRLRFAALVVVGDRNGR
                     VGFGTGKAQEVPEAIRKAVESAKKNMIEVPMVGTTIPHEVRSEFGGARVLLKPASEGS
                     GVAAGGATRAVIELAGIADVTSKSLGSNTPINIVRAIVEGLKQLKRAEEVAALRGISV
                     SDLA"
     gene            9817..9999
                     /gene="rpmD"
                     /locus_tag="U1021_001210"
     CDS             9817..9999
                     /gene="rpmD"
                     /locus_tag="U1021_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018376783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEM4711754.1"
                     /translation="MAQIKITLTKSPIGRKPEQRKTVVALGLGKLNSSVVKEDNPAIL
                     GMVNAISHLVTVEEVK"
     gene            10135..10575
                     /gene="rplO"
                     /locus_tag="U1021_001211"
     CDS             10135..10575
                     /gene="rplO"
                     /locus_tag="U1021_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004225266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEM4711755.1"
                     /translation="MKLHELQPATGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGG
                     GVRPGFEGGQTPLFRRLPKRGFTNINAKEYAIVNLDQLNAFEDGAEVTPVVLIEAGIV
                     KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITSKGGSVEVI"
     gene            10589..11899
                     /gene="secY"
                     /locus_tag="U1021_001212"
     CDS             10589..11899
                     /gene="secY"
                     /locus_tag="U1021_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEM4711756.1"
                     /translation="MFFKLLKDALKVKLVRSKILFTIFILFVFRVGTHITVPGVNAKS
                     LEALSNVPFLNMLSLVSGNAMRNFSVFALGVSPYITASIIVQLLQMDILPKFVEWGKQ
                     GEVGRRKLNQATRYISLVLAFVQSIGITAGFNALSGAKLTNMPLNWQTYLLIGSILTT
                     GSIIVTWLGEQISEKGYGNGTSMIIFAGIISSLPGTFHEIYIDRFVNIESSRLGESAI
                     FVAALVVLIFFVVYFTTFVQQAEYKLPIQYTKRAQGAPSSSYLPLKLNPAGVIPVIFA
                     GSITAVPTSLIQYFASQNKSAGWLLTVQEYFDYSTAKGMIVYAGLIIAFTFFYTFVQV
                     NPEKTAESLQKSAAYIHGVRPGNGTEQFLSKLLTRLAVIGALFLSFVALLPILAQNLF
                     GLSSSIAFLGTSLIIVISTSIEGIKQLEGYLLKRKYVGFLEITE"
     gene            11993..12634
                     /locus_tag="U1021_001213"
     CDS             11993..12634
                     /locus_tag="U1021_001213"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001050429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEM4711757.1"
                     /translation="MNLLIMGLPGAGKGTQAAKIVEKFNVAHISTGDMFRAAMANQTE
                     MGILAKSYIDKGDLVPDEVTNGIVKERLVQDDIKEKGFLLDGYPRTIEQAHALDENLA
                     DLGIELQGVINIEIDPSKLVERLSGRIIHKETGETFHKVFNPPVGDYKEEDFYQREDD
                     KPESVKRRLEVNIAQGQPIIDHYRAKGLVHDIEGDQDIDLVFQAIDTVLSKLQ"
     gene            12756..12974
                     /gene="infA"
                     /locus_tag="U1021_001214"
     CDS             12756..12974
                     /gene="infA"
                     /locus_tag="U1021_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003130554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEM4711758.1"
                     /translation="MAKEDVIEIEGKVVDTMPNAMFTVELENGHQVLATVSGKIRKNY
                     IRILVGDRVTVELSPYDLTRGRITYRFK"
     gene            12999..13115
                     /gene="rpmJ"
                     /locus_tag="U1021_001215"
     CDS             12999..13115
                     /gene="rpmJ"
                     /locus_tag="U1021_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013773089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEM4711759.1"
                     /translation="MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG"
     gene            13135..13500
                     /gene="rpsM"
                     /locus_tag="U1021_001216"
     CDS             13135..13500
                     /gene="rpsM"
                     /locus_tag="U1021_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008809894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEM4711760.1"
                     /translation="MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVR
                     VKDLTSDQEDAIRREVDAIKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNT
                     KNNARTRKGKAVAIAGKKK"
     gene            13518..13901
                     /gene="rpsK"
                     /locus_tag="U1021_001217"
     CDS             13518..13901
                     /gene="rpsK"
                     /locus_tag="U1021_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003130556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEM4711761.1"
                     /translation="MAKPTRKRRVKKNIESGIAHIHATFNNTIVMITDVHGNAIAWSS
                     AGALGFKGSRKSTPFAAQMASEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAG
                     LEVTAIRDVTPVPHNGARPPKRRRV"
     gene            13946..14884
                     /locus_tag="U1021_001218"
     CDS             13946..14884
                     /locus_tag="U1021_001218"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000568977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEM4711762.1"
                     /translation="MIEFEKPTITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLA
                     SLPGAAVTLIKIDGVLHEFDTVPGVREDVMQIILNIKGIAVKSYVEDEKKIELDVVGP
                     AEVTAGDILTDSDIEIVNPDHYLFTIADGATFKAVLTVNSGRGYVPAEGNKKDDAPVG
                     TLAVDSIYTPVKKVNYQVEPARVGSNDGFDKLTLEINTNGTIIPEDALGLSARILMEH
                     LGLFTDLTEVAKSAEVMKEAEVASDDRMLDRTIEELDLSVRSYNCLKRAGINTVFDLT
                     EKTEPEMMKVRNLGRKSLEEVKVKLADLGLGLKKDK"
     gene            14899..15285
                     /gene="rplQ"
                     /locus_tag="U1021_001219"
     CDS             14899..15285
                     /gene="rplQ"
                     /locus_tag="U1021_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002887523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEM4711763.1"
                     /translation="MAYRKLGRTSSQRKAMLRDLTTDLLINESIVTTEARAKEIRKTV
                     EKMITLGKRGDLHARRQAAAFVRNEIASENYDEATDKYTSTTALQKLFSEIAPRYAER
                     NGGYTRILKTEPRRGDAAPMAIIELV"
BASE COUNT         4883 a         2989 c         3347 g         4228 t
ORIGIN      
        1 tcatgagctg aaaatcaaag agcgaattga ggtccggtgg agtgaagcag tctgggggag
       61 actgtttcag cccgagttaa gaaacagcaa ggggaggaat gaatcatgag ccagaaaatc
      121 aaaagggagg ccagatgaaa gatagtttta cagaaagaag taagaagctg agtgaggaat
      181 tagagaggtg tctactggct gataaaaata ttttggtcat attagacata atggatagaa
      241 gtaaatgaag aatcctgaaa taaaagtttt gggatttttt gaatttttga gtaaaaactc
      301 ttgcaatggc aagtagaatc tggtagaatg ttctagtgcc gtaaaaatac ggctgtagct
      361 ttgatgcaag aggttgcgac acgctcggtt gcattgccac gcaacacgtg ttggttttct
      421 tgtggagcta gcctattatg ttaaatagac gaaaaggaga aaaagatggc aaacaaaaaa
      481 attcgcatcc gcttgaaagc gtacgaacac cgtacacttg atacagcagc tgcaaaaatc
      541 gttgaaactg caacacgtac aggtgctcaa gtagcaggtc cagttccgct tccaacagaa
      601 cgtagcctct acacaatcat ccgtgcgact cacaagtata aagactctcg tgagcagttc
      661 gaaatgcgta cacacaaacg tttgatcgac atcgttaacc caactcaaaa aacagttgat
      721 gcgttgatga aattggatct tccaagtggt gtaaacgtag aaatcaaatt gtaatcaagt
      781 agcaaggtaa actaaaagca agtgttcatg atcgaacacg ggctaaactc tgtgtgaaaa
      841 atataaaatt gtctaggctc cctgagccgt cgccgaattt tcctattttc acgttgagtt
      901 tgacgccctt tgtatcttga tttgagcatg aaaaacgctc gttaaaaact ttttaaatac
      961 aaaataagaa aaggaatatt tttctcatga caaaaggaat cttagggaaa aaagtgggaa
     1021 tgactcaaat cttcactgaa tctggtgaat ttatccctgt tactgtcatc gaagcaactc
     1081 caaacgttgt tcttcaagtg aaaacagttg aaactgacgg ttatgcagca gttcaagttg
     1141 gttttgatga caaacgtgaa gtattgagca acaaacctgc caaaggccat gtagctaaag
     1201 ctaacacagc tcctaagcgc ttcattcgtg aattcaaaaa cattgaaggc ttggaagttg
     1261 gacaagaaat tacagttgaa actttcgcag ctggtgatgt tgttgatgta actggtacat
     1321 ctaaaggtaa aggtttccaa ggtgttatca aacgccatgg tcaatcacgt ggtcctatgg
     1381 ctcacggttc tcgttaccac cgtcgtccag gttctatggg tcctgttgca cctaaccgtg
     1441 tattcaaagg taaaaacctt gcaggtcgca tgggcggcaa ccgtgtaaca attcaaaacc
     1501 ttgaagttgt acaagttgtt ccagagaaga acgttatcct tatcaaaggt aacgtaccag
     1561 gtgctaagaa atctcttatc actatcaagt cagcagttaa agctggtaaa taataaggaa
     1621 aggggaaatc agtcgaaatg gcaaacgtaa cattatttga ccaaactggt aaacaagctg
     1681 gtgaagtagt tcttaacgat gcgatttttg gtatcgagcc aaaccaagca gttgtatttg
     1741 atgtgattat cagccaacgt gctagccttc gtcaaggtac tcacgcagtt aaaaaccgtt
     1801 cagcagtctc aggtggcgga cgcaaaccat ggcgtcaaaa aggaactgga cgtgctcgtc
     1861 aaggttctat ccgttcacca caatggcgtg gcggtggcgt agtcttcgga ccaactccac
     1921 gttcatacgc gtacaaactt ccacaaaaag ttcgtcgctt ggcacttaaa tctgtttact
     1981 cagaaaaagt tgctgaaaac aaatttgtag ctgttaactc acttgaattc acagctccaa
     2041 aaactgctga atttgcaaaa gtacttgcag cattgagcat tgattctaaa gtccttgtta
     2101 ttcttgaaga aggcaacgaa ttcgcagctc tttctgctcg taacatccca ggagttaaag
     2161 ttgcaactgc aacaactgca agcgtacttg acatcgcaaa tgcagacaaa cttcttgtaa
     2221 ctcaagcagc tatctctaaa attgaggagg ttcttgcata atgaatttgt atgatgttat
     2281 caaaaaacct gtcatcacag aaagctcaat gggccaactc gaagcaggca agtatgtatt
     2341 tgaagttgac actcgtgcac acaaactctt gattaagcaa gctgttgaag ctgcattcga
     2401 gggtgttaaa gttgcaaatg ttaacacaat caacgtgaaa cctaaaacaa aacgcgtagg
     2461 tcgttatgta ggtcgcacaa acaaagtgaa aaaagcaatc atcacattgg ctgctgattc
     2521 aaaagcgatc gaattgttcg ctacagctga cgctgaataa tcaaaggagg aattaacgtg
     2581 ggtattaaag tttataaacc aacgacaaat ggccgtcgta acatgacttc tttggacttc
     2641 gctgaaatca caacaagcac tccagaaaaa agcttgcttg ttgcattgaa aaacaaagct
     2701 ggtcgtaaca acaatggtcg catcactgtt cgtcaccaag gtggcggtca caaacgtttc
     2761 taccgtttgg tagacttcaa acgtaacaaa gatggcgttg aagcaatcgt taaaactatc
     2821 gagtacgatc caaaccgttc agcaaacatc gctcttgtac actacacaga cggtgttaaa
     2881 gcttacatca ttgctcctaa aggtcttgaa gttggtcaac gcatcgtttc aggtccagaa
     2941 gcagatatca aagttggtaa cgcacttcca cttgcaaaca tcccagtcgg tactgttgtt
     3001 cacaacatcg agttgaaacc aggtcgcggt ggtgagttgg ttcgtgctgc tggtgcatct
     3061 gcacaggttc ttggtcaaga aggtaaatac gttcttgttc gccttcaatc aggtgaagtt
     3121 cgtatgatcc ttggtacttg ccgtgctact gttggtactg taggtaacga acaacatggc
     3181 cttgttaacc ttggtaaagc aggtcgtagc cgttggaaag gtatccgtcc aacagttcgc
     3241 ggttctgtaa tgaaccctaa cgatcaccca cacggtggtg gtgaaggtaa agcaccagtt
     3301 ggtcgtaaag caccatctac accatggggt aaaccagctc ttggtttgaa aactcgtaac
     3361 aagaaagcta aatctgacaa acttatcgtt cgtcgtcgca accaaaaata atctattctt
     3421 agttgcttag cattctatat catccgccaa ctcggtagcc cgcaaagcgg gcaagccgct
     3481 gtggtacata ttttaaagga gaaaacacta aaatgggacg tagtcttaaa aaaggacctt
     3541 tcgtcgatga gcatttgatg aaaaaagttg aagctcaagc aaacgacgaa aagaaaaaag
     3601 taattaaaac ttggtcacgt cgttcaacga ttttcccaag tttcatcggt tatacaatcg
     3661 cagtttacga tggacgtaaa cacgtacctg tatacattca agaagacatg gtaggtcaca
     3721 aacttggtga atttgcacca actcgtactt acaaaggtca tgctgctgac gacaagaaaa
     3781 ctcgtcgtaa ataatttagg aggaaaacac aatggcagaa attacttcag ctaaagcaac
     3841 tgctcgcaca gtacgtgttt cacctcgtaa atcacgtctt gtcttggata acatccgtgg
     3901 caaaagcgta gcagacgcaa tcgcaatctt gaaattcaca ccaaacaaag ctgcaggcat
     3961 tatcgaggga gttttaaact cagcaatcgc taacgctgaa aacaactttg gtttggaaaa
     4021 agctaacttg gtagtcagcg aagcattcgc aaacgaagga ccaacgttga aacgtttccg
     4081 tccacgtgcg aaaggttcag cttcaccaat taacaaacgc acagctcaca tcactgtagt
     4141 tgtggcagag aaataaggag gtaaaaacgt gggtcaaaaa gtacatccaa ttggtatgcg
     4201 tgttggcatc atccgtgatt gggatgctaa atggtatgct gaaaaagaat acgcggatta
     4261 ccttcatgaa gatcttgcaa tccgcaactt tatcaaaaaa gaattggctg atgcgtcaac
     4321 atcaacaatc gaaatcgaac gtgctgtaaa taaagtaatt gtttctatcc acactgctaa
     4381 gccaggtatg gttatcggta aagctggtag caacgttgat gcacttcgtg ctcaattgaa
     4441 caaattgact ggtaagcaag tacacatcaa catcatcgaa atcaaacaac ctgatttgga
     4501 tgcacacctt gttggtgagt caatcgctcg tcaattggag caacgtgtgg cattccgccg
     4561 tgctcaaaaa caggctatcc aacgtgcaat gcgcgctggt gcaaaaggta tcaaaacaca
     4621 agtttctggt cgtttgaacg gtgctgatat tgcccgtgca gaaggctact cagaaggaac
     4681 tgttcctctt catacacttc gtgcggatat cgactacgct tgggaagaag ctttgacaac
     4741 ttacggtaaa cttggtgtta aagtatggat ctaccgtggt gaagttcttc cagctcgtaa
     4801 aaacactaaa ggaggtaaat aacaaatgtt agtacctaaa cgtgtaaaac accgtcgtga
     4861 attccgtgga aaaatgcgcg gtgaagctaa aggtggaaaa caagtagact ttggtcaata
     4921 cggtcttcaa gcaactacta gctcatggat tacaaaccgc caaatcgaag ctgcccgtat
     4981 cgctatgacg cgttacatga aacgtggtgg taaagtttgg atcaagatct tcccacacaa
     5041 atcatacact gctaaagcta tcggtgtacg tatgggttct ggtaaaggtg ctcctgaagg
     5101 ttgggtagct ccagttaaac gcggtaaggt tatgtttgaa gtagctggcg tttctgaaga
     5161 aatcgctcgc gaagcattcc gccttgctgg tcacaaattg ccagttaaag ttaaattcgt
     5221 aaaacgtgaa gcagaataag gagaagacat gaaacttcaa gaaattaaag attttgtaaa
     5281 agaacttcgt ggcctttctc aagaagaact tgctaagaaa gaaaacgaat tgaagaaaga
     5341 actcttcgaa cttcgtttcc aagctgctgc tggtcaactt gagcaaactg ctcgtttgaa
     5401 cgaagtgaag aaacaaattg cacgtatcaa aactgtgcaa tctgaaacta aataatagat
     5461 tgggaaagga gaatttcaat ggaacgcaat aatcgtaaag ttcttgttgg acgcgtagta
     5521 tctgacaaaa tggacaaaac aatcacagtt gtagttgaaa ctaaacgtaa ccacccagtc
     5581 tatggtaaac gtattaacta ctctaaaaag tacaaagctc atgatgaaaa caatgttgct
     5641 aaagaaggcg atatcgttcg tatcatggaa actcgcccac tttcagctac aaaacgtttc
     5701 cgtcttgtag aagttgtgga agaggcagtt atcatttaat caacctgaaa ggagaaaatt
     5761 gacatgattc aaacagaaac tcgtttgaaa gttgctgaca acagtggcgc acgtgaaatc
     5821 ttgacaatca aagttcttgg tggttcagga cgtaaattcg cgaacatcgg cgacatcatc
     5881 gttgcttcag taaaacaagc tactcctggt ggtgcggtta aaaaaggtga cgttgttaaa
     5941 gccgttatcg ttcgtactaa gacaggtgct cgtcgtgctg atggttcata catcaaattc
     6001 gatgagaatg ctgcagttat catccgtgaa gacaaaaacc ctcgcggaac tcgtatcttt
     6061 ggcccagtgg cacgcgaatt gcgtgatggc ggtttcatga aaatcgtttc attggcacca
     6121 gaagtacttt aatcaaatag ttttaggaaa tttgttacaa actaacgaag tctgtgacgg
     6181 gtttagtaaa ctagaaaaca aactaagtcc cctggttaaa tcactaacca gggtgcccat
     6241 tagggcgtaa gaaattatag gagaaatcaa atgtttgtaa aaaaaggcga taaagttcgc
     6301 gtaatcgctg gtaaagacaa aggcgttgaa gcagttgtcg taacagcact tccaaaagta
     6361 aacaaagtta ttgttgaagg tgttaacatc gttaagaaac accaaaaacc aaacagcgaa
     6421 aaccctcaag gcgctatcgt tgaaaaagaa gctccaatcc atgtgtcaaa cgttcaagtt
     6481 cttgacaaaa atggtgttgc aggacgcgtt ggttacaagt ttgtagacgg caaaaaagtt
     6541 cgctacaaca aaaaatcagg cgaagtgctt gattaatcac gaaggaaagg agaagtataa
     6601 tggcaaatcg tttaaaagaa aaatatctta atgaagtagt tcctgctttg actgaacaat
     6661 ttaactattc ttcagttatg gctgtgccaa aagttgataa gatcgttttg aacatgggtg
     6721 ttggtgacgc tgtttctaac gctaaaaacc ttgagaaagc tgctcaagaa ttggctttga
     6781 tctcaggtca aaaaccactt atcactaaag ctaagaaatc aatcgccggc ttccgtcttc
     6841 gtgagggtgt tgcgatcggt gcgaaagtaa ctcttcgtgg cgaacgtatg tatgaattct
     6901 tggacaaatt ggttacagtt tcacttccac gtgtacgtga cttccacggt gtaccaacta
     6961 agtcatttga cggacgtggt aactacacac ttggtgtgaa agagcaattg atcttcccag
     7021 aaatcaactt cgacgatgtt gataaaactc gcggtatgga tatcgttatc gttacaactg
     7081 ctaacactga cgaagaatca cgtgcattgc ttactggcct tggtatgccg tttgcaaaat
     7141 aagagggaga gaataaatgg ctaaaaaatc aatgatcgct aagaacaaac gcccagctaa
     7201 gttctctaca caagcttaca cacgctgtga aaaatgtgga cgtccacact cagtttaccg
     7261 caaattcaaa ttgtgccgtg tatgcttccg cgacttggct taccttggac aaattcctgg
     7321 cgtaacaaaa gcttcttggt aagaataact tgctattccg ttgcaattcg tcgtcagcac
     7381 ttcttgccgt acgctagtac tgcctgcgaa gtgcttccta gacttgctta ggactagcaa
     7441 cttattctat atacacttat cactagtccg caaggacatc attaactagc aagtgactag
     7501 atcaaactac tagtaagagg agaaacaaca aatggttatg actgacccaa ttgcagattt
     7561 tttgacacgt attcgtaacg ctaaccaagc taaacacgaa gtgcttgaag ttcctgcatc
     7621 aaacatcaaa aaaggtattg ctacaatcct taaaaacgaa ggttttgtga aaaacgttga
     7681 attcatcgaa gatgacaaac aaggtatcat ccgcgtattc ttgaaatacg gaccaaacgg
     7741 tgaaaaagtt atcactaact tgaaacgcgt ttcaaaacca ggtcttcgtg tttactcaaa
     7801 acgtgaagat attccaaaag ttcttaacgg acttggtatc gcaatcatct caacatcaga
     7861 aggtcttttg actgacaaac aagctcgtca aaagaacgtt ggtggtgagg ttatcgcata
     7921 cgtttggtaa tcttttagct tccaatttcg tcatgtgcct gtgttagagc gtcttgacat
     7981 actcaagtat ggtctgcgtc gctctgcctt gtcacattta gaaattgaaa cctaaaagca
     8041 tgatacaaac gcgagaggac tggttcttcg ttcgtgttca aatcagacgt actgattatt
     8101 tagtatcatg caaccaaact agaacaagat tcactaattg aacacgccta caactctttg
     8161 aaaaaagaaa aactcccctt agatgctcaa gcatcagcag tcgagtttcc tatttttctt
     8221 tgagttgctt aacggctttg tatcttgttc accccgtgaa aactagtcgc ttgacggctt
     8281 gataatttaa caggagaatt aaaaaatatg tcacgtattg gtaataaagt aattacattg
     8341 cctgctggcg ttgagcttgc tcaaaacaac ggcgtggtaa ctgtaaaagg acctaaaggg
     8401 gaattgactc gtgaattccc aactgctatt gaaatccgtg tggaaggtgc agaagtaact
     8461 cttcaccgtc caaacgattc aaaagaaatg aagactattc acggtactag ccgtgctaac
     8521 ctcaacaaca tggttgttgg tgtttctgaa ggcttcaaaa aagaacttga aatgcgtggt
     8581 gtcggttacc gtgctcaatt ggctggtaac aaattgacac ttgctgttgg taaatcacat
     8641 ccagatgaag tggttgcacc agaaggtatt acatttgaag ttccaacacc aacacaaatc
     8701 gtcgtgtctg gtatcaacaa agaagttgtt ggtcaaacag cagcttacat ccgtagcctt
     8761 cgcgctcctg agccatacaa aggtaaaggt atccgctacg ttggtgaatt cgttcgccgt
     8821 aaagaaggta aaacaggtaa ataatagctt gctgaggtgg cttagccacc tggctgacta
     8881 tttctcaaat tgtttcgcaa gaaacagaat catacattaa gaggtgaata ttgtgatttc
     8941 aaaaccagat aaaaacaaaa tccgccaaaa acgccaccgt cgcgttcgtg gtaaaatctc
     9001 tggaactgct gctcgcccac gtttgaacat tttccgttct aatacaggca tctacgctca
     9061 agtgattgat gacgtagcgg gtgtaacgct cgcaagcgct tctactcttg ataaagaagt
     9121 ttcaaaaggt actaagacag aacaagctgt tgttgtaggt aaactcgttg ctgaacgcgc
     9181 ggtagctaaa ggtatttctg aagtggtctt tgaccgcggt ggatatctct atcacggacg
     9241 tgtgaaagct ttggctgaat cagctcgtga aaacggattg aaattctaat agggaggaca
     9301 ctaagaaatg gcattcaaag ataacgcagt tgaaattgaa gaacgcgtag tagccatcaa
     9361 ccgtgttaca aaagttgtta aaggtggacg tcgtcttcgt tttgcagctc ttgtggttgt
     9421 tggtgaccgt aacggtcgcg taggtttcgg tactggtaaa gctcaagaag taccagaagc
     9481 tatccgtaaa gcagttgaat ctgctaagaa aaacatgatt gaagtaccaa tggttggtac
     9541 aacaatccct cacgaagttc gctcagaatt tggcggcgct cgtgtattgt tgaaacctgc
     9601 ttcagaaggt tctggggttg ctgccggtgg tgcaactcgt gccgtaatcg aattggcagg
     9661 tatcgcagat gtgacttcta agtcacttgg ttcaaacaca ccaatcaaca tcgttcgcgc
     9721 aatagttgaa ggtttgaaac aattgaaacg tgctgaagaa gtggctgcac ttcgtggcat
     9781 ctcagtttct gatttagcat aagaaaggag atactcatgg ctcaaattaa aatcactttg
     9841 actaagtctc caatcggtcg caaaccagaa caacgtaaaa cagttgttgc acttggactt
     9901 ggtaaattga actcttcagt tgttaaagaa gataacccag ctattcttgg aatggttaac
     9961 gctatctctc acttggtaac tgtagaagaa gttaaataat ctaacaaata gactaagtcg
    10021 catagagaaa tctttgcgac tcctagtcca ttttacatat ttacatacag cgagtttgtg
    10081 gaggaagact cttgtacttc acaggcgcta gcatataaaa gaggagaaat aataatgaaa
    10141 cttcatgaat tacaacctgc tacaggttct cgtaaagtcc gcaaccgtgt aggtcgtggt
    10201 acatcatcag gtaacggtaa aacatctggc cgtggtcaaa aaggccaaaa agctcgtagc
    10261 ggtggcggtg ttcgcccagg ttttgaaggt ggacaaactc cattgttccg tcgtcttcca
    10321 aaacgtggat ttacaaatat caacgctaaa gagtacgcaa tcgttaacct tgatcaattg
    10381 aacgcttttg aagatggtgc agaagtaaca ccagttgtgc ttatcgaagc tggaatcgtt
    10441 aaagctgaaa aatcaggaat taaaattctt ggtaacggtg aattgacgaa gaaattgaca
    10501 gttaaagctg ctaaattctc taaatcagct gaagaagcaa tcacttctaa aggtggctca
    10561 gtagaagtca tctaagaggt gacagcctat gttttttaaa cttttaaaag atgccttaaa
    10621 ggtaaaattg gtacgtagta aaattctatt tactatcttt atcctttttg tcttccgcgt
    10681 aggaacccac attacagtac caggagtaaa cgcaaagagt cttgaagcct tgtcaaatgt
    10741 tccatttttg aacatgttga gcttggtttc gggaaatgct atgcgtaatt tctcagtttt
    10801 cgcactaggt gttagtcctt atattacagc ttccatcatt gttcaacttt tgcaaatgga
    10861 tattttacct aaatttgttg aatggggtaa gcaaggtgaa gttggtcgtc gtaaactgaa
    10921 tcaggcaaca cgctacattt ctttggtact ggcatttgtt caatctattg gtattacagc
    10981 aggctttaat gccttgtctg gtgcaaagtt gaccaatatg ccattaaatt ggcaaacata
    11041 tttgttgatt ggatcaattt tgacaacagg ttcaattatt gtaacctggt tgggggaaca
    11101 aatttctgaa aagggctatg gtaatggtac atcaatgatc atcttcgcgg gtatcatttc
    11161 atcactacca ggaacttttc acgagattta cattgatcgc tttgttaata ttgaatcaag
    11221 tcgtttgggg gagtcagcaa tctttgttgc tgcactcgtc gtattaatat tctttgttgt
    11281 gtattttaca acttttgtac aacaagcaga atataaatta ccaattcaat atacaaaacg
    11341 tgcacaagga gcaccttcta gctcatattt accgctgaaa ttgaatccag caggagttat
    11401 tccagtaatc tttgcaggct caatcactgc agttccaact tctttgattc aatatttcgc
    11461 aagtcaaaat aagagtgccg ggtggttatt gacggttcag gaatactttg attactcaac
    11521 tgctaaaggt atgattgtat atgcaggttt aattattgcc tttacattct tctacacctt
    11581 tgttcaagta aatcctgaga agactgcaga aagccttcag aaaagtgcag cctatatcca
    11641 tggagttcgt cctggtaatg gcactgaaca gtttttgtca aaattattga caagattggc
    11701 agtaatcggt gcactcttct tgagttttgt agctttgctg cctatccttg cgcaaaatct
    11761 ctttgggctt tcttcaagca ttgcgttcct tggtacaagt ttgattatcg taatctctac
    11821 aagtatcgaa ggcatcaagc aattagaagg ctaccttctt aagagaaaat atgtaggttt
    11881 cttagaaatt acagaataga atataggttg acctagtcaa ccttctattt tgtttttaga
    11941 taagtttgtc aataatggca aatttatgtg aaaacaaaat aaggagtttg tcatgaatct
    12001 tttaattatg ggtttaccag gtgctggtaa agggacacaa gcggccaaga ttgttgagaa
    12061 attcaatgtt gctcatatct caacaggaga tatgttccgt gcagcaatgg ccaatcagac
    12121 tgaaatgggt attcttgcca agtcgtacat tgataagggt gacctcgttc ctgatgaagt
    12181 tactaatggc attgtcaaag aacgtttggt tcaggatgac atcaaggaaa aaggcttttt
    12241 actagatggc tatcctcgta cgattgaaca agctcatgcc ttggatgaaa atttggctga
    12301 cttaggaatt gagttgcaag gtgttatcaa tattgagatt gatccttcaa aattggtaga
    12361 gcgtctcagc ggtcgtatta ttcataaaga aaccggagag actttccaca aagtattcaa
    12421 tccacctgtt ggagactaca aagaggaaga cttctatcaa cgtgaagatg acaagccaga
    12481 atctgtcaaa cgtcgtttag aggtcaatat cgcacaagga cagccaatca ttgatcatta
    12541 tcgtgcaaaa gggctggtcc atgatattga aggtgaccaa gacattgacc ttgttttcca
    12601 agcaattgat acagtactat caaaattgca ataaactaat agatttggct tgcatttttt
    12661 atacaaagat gataaaatag cctagtctga cttataattg ttacctctgt gttcagagga
    12721 catcaaatcg atatttagag aggggttact tttgcatggc aaaagaagat gtgattgaaa
    12781 ttgaaggcaa agtagtcgat acaatgccaa atgctatgtt tactgttgag ttggagaacg
    12841 gacaccaagt ccttgcaact gtttcaggta aaatccgtaa aaactacatt cgtattttgg
    12901 tcggtgaccg cgtaactgtt gagcttagtc catacgactt gacacgtgga cgtatcacat
    12961 accgctttaa atagtcgaaa tacttggagg gattaaacat gaaagtaaga ccatcggtca
    13021 aaccaatttg cgaatactgc aaagttattc gtcgtaatgg tcgtgttatg gtgatttgcc
    13081 cagcaaaccc taaacacaag caacgtcaag gttaagaaat agaaaggaga aaacatggct
    13141 cgtattgctg gagttgacat tccaaatgac aaacgtgtag ttatttcatt aacttatgtt
    13201 tatggtatcg gtcttgcaac atctaaaaaa attcttgcag ctgcaggtat ttcagaagat
    13261 gtacgcgtga aagatttgac atcagatcaa gaagatgcta ttcgtcgtga agttgatgca
    13321 atcaaagttg aaggtgacct ccgtcgtgaa gttaacttga acatcaaacg tttgatggaa
    13381 atcggttcat accgtggtat ccgtcaccgt cgtggacttc ctgtccgtgg acaaaacact
    13441 aaaaacaatg cccgcactcg taaaggtaaa gctgttgcga ttgcaggtaa gaaaaaataa
    13501 tataggaggt agaaaaattg gctaaaccaa cacgtaaacg tcgtgtgaaa aagaatatcg
    13561 aatctggtat tgctcatatt cacgctacat ttaataacac tattgttatg attactgatg
    13621 tgcatggtaa cgctattgct tggtcatcag ctggtgctct tggtttcaaa ggttctcgta
    13681 aatctacacc attcgcagcc caaatggctt cagaagcagc tgctaaatct gcacaagaac
    13741 acggtcttaa aacagttgaa gttaccgtta aaggcccagg ttcaggtcgt gagtctgcta
    13801 tccgcgctct tgctgccgct ggtcttgaag taacagcaat tcgtgatgtg actcctgtac
    13861 cacacaatgg tgctcgtcct ccaaaacgtc gccgtgtata atcatacatt ccatacacag
    13921 cttttcgttt aagagggagt aagaaatgat tgagtttgaa aaaccaacaa taacaaaaat
    13981 tgatgaaaat aaagattacg gcagatttgt gatcgaacca ttagaacgtg gttacggtac
    14041 aactcttggt aactctcttc gtcgtgtact tcttgcctca cttccaggtg ctgcagtaac
    14101 attaattaaa attgatggtg tactccacga attcgacaca gttccaggtg ttcgtgaaga
    14161 tgttatgcaa attattctta acatcaaagg cattgctgta aaatcttatg tcgaagacga
    14221 aaagaaaatt gaacttgatg tagtaggtcc agctgaagta acagcaggag acattcttac
    14281 agatagtgac attgaaattg taaaccctga ccattatctc tttaccattg ctgatggtgc
    14341 cacttttaaa gctgttttga ctgtcaattc aggtcgtggt tatgtaccag ctgagggtaa
    14401 taagaaagat gatgcaccag tgggaacact tgctgtagat tctatctata cgccagtgaa
    14461 gaaagtcaat tatcaagttg aaccagctcg tgttggtagc aacgatggtt ttgacaaatt
    14521 aacacttgaa atcaacacaa atggcaccat tattccagaa gatgctttag gtctttctgc
    14581 acgcattttg atggagcact taggtctctt cactgacttg actgaagttg caaaatctgc
    14641 agaagtgatg aaagaagctg aagtggcttc agatgatcgt atgcttgatc gtacgattga
    14701 agaattggat ctatctgttc gctcatataa ctgtctgaaa cgcgcaggca ttaacactgt
    14761 attcgacttg acagagaaga ctgagccaga aatgatgaaa gtgcgcaatc ttggtcgcaa
    14821 gagtcttgaa gaagttaaag ttaaattggc tgatcttggt ctaggattga aaaaagataa
    14881 ataatatagg aggaaatcat ggcataccgt aaactaggac gcactagctc acaacgtaaa
    14941 gcaatgttgc gcgatttgac aactgacctt ttgatcaacg aatcaatcgt tacaactgaa
    15001 gctcgtgcta aagaaatccg taaaacagtt gaaaaaatga tcacacttgg taaacgtggt
    15061 gatttgcacg cacgtcgtca agcagcagca tttgttcgta acgaaattgc atctgaaaac
    15121 tatgatgaag caactgataa gtacacttct actacagcac ttcaaaaatt gttctctgaa
    15181 attgcacctc gttatgcaga acgtaatggt ggatatactc gtatcctcaa aactgaacca
    15241 cgtcgtggtg atgctgcacc aatggcaatt atcgaacttg tataagatca tcaattttgt
    15301 tgagtgttat gatgatggaa tcctattctg attcttagtc tagctctggt ctaccgctga
    15361 gcttgtctca gcggtaacac tcatcatgtt gattggacgc ttgtttacga aattactcta
    15421 agatagaata atttcgtaag caggcgt
//
LOCUS       DASFQD010000051        15327 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.051, whole genome shotgun sequence.
ACCESSION   DASFQD010000051 DASFQD010000000
VERSION     DASFQD010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 15327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15327
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.051"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(370..1725)
                     /locus_tag="U1021_001220"
     CDS             complement(370..1725)
                     /locus_tag="U1021_001220"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEM4711764.1"
                     /translation="MKVIKFGGSSLASAGQLEKVFNIVQSDSERRFVVVSAPGKRNAE
                     DTKVTDALIKYYKEYVNGKDVTASQEWIINRYQAMVDELGFTANSMKKIADSIISLAS
                     LPIDDNEFLYDAFLAAGEDNNAKLIAEYFTHRGLPARYVHPKKAGIIVSSEPGNARIL
                     PSSYDKIEELRDTDEVLIIPGFFGVTVDNQICTFSRGGSDITGSIIAAGVKADLYENF
                     TDVDGIFAAHPGIIKNPHSIKELTYREMRELAYAGFSVLHDEALLPAYRGRIPLVIKN
                     TNNPTHPGTRIVHKHTEQTVPIVGIAADDGFVSINLSKYLMNREVGFGRKVLQILEDL
                     NIRWEHMPTGIDDLSIVVRERELTPIKEEEILRQLNTKMEVDKAEIEHGLSIIMIVGE
                     NMKSHVGVTATATTALSKQNVNLAMISQGASEVSVMFVVKTEEKKRALHALYEAFFNE
                     Q"
     gene            1902..2543
                     /locus_tag="U1021_001221"
     CDS             1902..2543
                     /locus_tag="U1021_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HEM4711765.1"
                     /translation="MVKAIIFDMDGVLFDTETFYFQRRVDFLATKGLSVDHLAPSIFV
                     GGRASQIWQRILGDDYDNWDVPALEEEYRVYKEKRPTPYAERIFPEVKAVLERLTIQG
                     IPVVLASNTDRSEIERALLDAGIRSHFSHIFSAMDCEAPKPDPTVYMKAASATGVAKS
                     DILVFEDSAKGIEAAKKAGLTVWAIRDQHYGIDQSKADKLVDNLEEAFDLLRF"
     gene            2980..3771
                     /locus_tag="U1021_001222"
     CDS             2980..3771
                     /locus_tag="U1021_001222"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEM4711766.1"
                     /translation="MDYQTIRYEVIDSVAILTLNRPEVANGFNIPMCEEILEAIRLAE
                     GDASVKILQIQAQGSIFSVGGDLVEMKRAVDDDDIASLVKIAELVNDISFAMKKLSKV
                     VIMVTDGAVAGAAANMAVAADFVIASSKTKFIQAFVGVGLAPDAGGLFLLSRAIGANR
                     ASHLAMTGEGLSADKALEYGIIYKLAEPEKLEKTVAQVIKKLLRGSVNSYAAIKQLTW
                     ESQFKDWESYRRLELDLQETLAYKEDFKEGVRAHAERRRPVFTGD"
     gene            3852..4286
                     /locus_tag="U1021_001223"
     CDS             3852..4286
                     /locus_tag="U1021_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM4711767.1"
                     /translation="MEDPKVNEYLTAIFNNVLVIEETSLRGSRFNDISIKEMHTIDVI
                     GSIDGATPSDVARTLMVTLGTVTTSLNNLERKGYVERIRSTKDRRVVHLYLTKKGRLV
                     YRLHQRFHNEMVKQITDGMDETEYQVMKKGLMKLYHFLEDLK"
     gene            4283..5260
                     /locus_tag="U1021_001224"
     CDS             4283..5260
                     /locus_tag="U1021_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HEM4711768.1"
                     /translation="MRNHAKISQVAHYLPKKIVTNDDLAQQMDTSDEWIRSRTGIGQR
                     HIVTGETTSDLASQVARKLLEKSQLDASEIDFIIVATITPDASMPSTAAMVQAAIGAK
                     NAFAYDLVAACSGFVFALSTAEKLLASGVYKRGLVIGAETLSRSVDWSDRSTAVLFGD
                     GAGGVLLEACEQPTFLAEILRTDGGRGASLTAGIDQKETPFSTQSRQQPFIQMEGRAI
                     FEFATRDVTATMAELLEQADMTVDCVDYFLLHQANIRILDKMARKLGVAREKFPANMD
                     KYGNTSAASLPILLSECVESGMLRLDGSQTVLMAGFGGGLTWGTLLLQL"
     gene            5320..5544
                     /locus_tag="U1021_001225"
     CDS             5320..5544
                     /locus_tag="U1021_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEM4711769.1"
                     /translation="MAVFEKVQEIIVEELGKDAEEVTLTTSFEDLDADSLDLFQVISE
                     IEDAFDIQIDTEEGLTTVGDLVAYVEEKTK"
     gene            5714..6679
                     /gene="fabK"
                     /locus_tag="U1021_001226"
     CDS             5714..6679
                     /gene="fabK"
                     /locus_tag="U1021_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-[acyl-carrier-protein] reductase FabK"
                     /protein_id="HEM4711770.1"
                     /translation="MKTKIIELLDIKYPIFQGGMAWVADGDLAGAVSNAGGLGIIGGG
                     NAPKEVVKANIDKVKSITDKPFGVNIMLLSPFADDIVDLVIEEGVKVVTTGAGNPGKY
                     MERLHAAGITVVPVVPSVALAKRMEKLGVDAVIAEGMEAGGHIGKLTTMTLVRQVVEA
                     VSIPVIAAGGIADGAGAAAAFMLGAEAVQVGTRFVVATESNAHQAYKEKVLKAKDIDT
                     TVSASIVGHPVRAIKNKLSSAYAAAEKDFLAGKISADAIEELGAGALRNAVVDGDVTN
                     GSVMAGQIAGLVSKEESCEDILKDIYYGAAKVIREEASRWASVGE"
     gene            6681..7601
                     /gene="fabD"
                     /locus_tag="U1021_001227"
     CDS             6681..7601
                     /gene="fabD"
                     /locus_tag="U1021_001227"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEM4711771.1"
                     /translation="MTKTAFLFAGQGSQTVGMARDLYEYYPIVRETFDQASQILGYDI
                     RDLIDNQEDKLHQTRYTQPAILTTSLAIYRLLAEKRIKPDMVAGLSLGEYAALVASGA
                     LVFEDAIALIAKRGEFMETAAPAGTGKMVAVLNADVSLIEEVCSSVTSGIVSPANYNT
                     PAQIVIGGEVAAVDEAVEALKAAGVKRMIPLNVSGPFHTALLRPASEQLAQALEQVEF
                     SDFQVELVGNTEAKVMKKEDIKSLLTRQVMEPVRFYESIATMQEAGVTNFIEIGPGKV
                     LSGFVKKIDKTAHVIAIEDIEGLQIVLNKS"
     gene            7611..8345
                     /gene="fabG"
                     /locus_tag="U1021_001228"
     CDS             7611..8345
                     /gene="fabG"
                     /locus_tag="U1021_001228"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004229639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HEM4711772.1"
                     /translation="MELTNKNVFVTGSSRGIGLAIAHKFASLGANVVLNGRGQLGQDL
                     LDSFSSYGVKVVAISGDISSSADAKRMVAEAVEALGSVDILVNNAGITKDGMALRMTE
                     EDFDTVLKVNLTGTFNMTQAVLKPMTKAREGAIINLSSVSGLIGNAGQANYSASKAGV
                     IGFTKAIAREVAGRNVRVNAIAPGFIQSDMTDVLSDKIKEAMTAQIPMKRFGATEEVA
                     DVAVFLAKQEYLTGQVIAVDGGLTMQ"
     gene            8359..9594
                     /gene="fabF"
                     /locus_tag="U1021_001229"
     CDS             8359..9594
                     /gene="fabF"
                     /locus_tag="U1021_001229"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEM4711773.1"
                     /translation="MTKLNRVVVTGYGLTSPIGNTPEEFWDSLVNGKIGIGKITKFDT
                     SEYTVHNAAEIKDFPFDKYFVKKDTNRYDNYSLYALYAAREAVANAKLDTEAVDSDRF
                     GVILSTGIGGILEIEEQVARMNEKGPKRIRPMALPKALPNMAAGNIAMQVGANGVCKC
                     VITACASSNDALGEAFREIKFGFQDVMLAGGAEAAITPFAIGGFQALTAMSTTEDPER
                     ASIPFDKDRNGFVMGEGSAVLVLESLEHAEARGATILAEIVGYGNTCDAYHMTSPHPE
                     GLGAIKAMKLAISEAGLEPADIDYINAHGTSTPANEKGESQAIVSVFGKNTPVSSTKS
                     FTGHLLGAAGAVEAAAVIEAMRHSYAPKTAGTTELSEAIEADVIYGQGRDMEIRHAIS
                     NTFGFGGHNSVIAFKRWEA"
     gene            9595..10071
                     /locus_tag="U1021_001230"
     CDS             9595..10071
                     /locus_tag="U1021_001230"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEM4711774.1"
                     /translation="MNITEIKDLMSQFDQSSLREFSYSNAGETLHFSKNQQATAVPSP
                     IVKAPLAPVAPASPAPVPAVETSEATPVEVSSSSVAEGAVVESPLVGVAYLSPAPDKP
                     AFVAVGDTVKKGQTLMIIEAMKVMNEVPADRDGVVTEILVVNQDVVEFGQGLVRIK"
     gene            10068..10490
                     /gene="fabZ"
                     /locus_tag="U1021_001231"
     CDS             10068..10490
                     /gene="fabZ"
                     /locus_tag="U1021_001231"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000565430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEM4711775.1"
                     /translation="MIDILKIKEALPHRYPMLLVDCVLEVSEDEIVALKNVTINEPFF
                     NGHFPDYPVMPGVLIMEALAQTAGVLELSKEENKGKLVFYAGMDKVKFKKQVVPGDQL
                     IMTAKFVKRRGTIAVVEAKAEVDGKLAASGVLTFAIGN"
     gene            10515..11882
                     /locus_tag="U1021_001232"
     CDS             10515..11882
                     /locus_tag="U1021_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEM4711776.1"
                     /translation="MFEKILIANRGEIAVRIIRAARELGIATVAVYSEADKEALQTML
                     ADEAVCIGPARSTDSYLNMQAVISAAVVTGAQAIHPGFGFLSENSKFATLCEEVGIKF
                     IGPSGTVMDTMGDKINARAEMIKAQVPVIPGSDGEVLTSQEALEIAEKIGYPVMLKAS
                     AGGGGKGIRKVEKAEDLVPAFESASSEAKAAFGNGAMYMERVVYPARHIEVQILADQH
                     GHVIHLGERDCSLQRNNQKVLEEAPSIAIGQTMRDRIGQAAVRAAQSVGYENAGTIEF
                     LLDEAKGEFYFMEMNTRVQVEHPVTEFVTGVDIVKEQIKIAAGQELSVRQEDVKITGH
                     AIECRINAENPAFNFAPSPGKISNLYLPSGGVGLRVDSAVYPGYTIPPYYDSMIAKVI
                     VHGENRFEALMKMQRALYELEIDGVVTNTDFQLDLISDKRVVAGDYDTAYLMEEFLPR
                     YQAEL"
     gene            12269..13135
                     /locus_tag="U1021_001233"
     CDS             12269..13135
                     /locus_tag="U1021_001233"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEM4711777.1"
                     /translation="MALFRKKDKYIRINPNRSRIESAPQAKPEVPDELFSKCPACKVI
                     LYKNDLGPEKTCQHCSYNFRITAQERLALTVDEGSFKELFTGIETTNPLDFPNYLEKL
                     AATRQKTGLDEAVLTGKATIGGQPVALGIMDSHFIMASMGTVVGEKITRLFELAIEER
                     LPVVLFTASGGARMQEGIMSLMQMAKISAAVKRHSNAGLFYLTVLTDPTTGGVTASFA
                     MEGDIILAEPQTLVGFAGRRVIESTVRENLPDDFQKAEFLQEHGFVDAIVKRQDLPAT
                     ISRLLRMHGGVR"
     gene            13132..13905
                     /locus_tag="U1021_001234"
     CDS             13132..13905
                     /locus_tag="U1021_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HEM4711778.1"
                     /translation="MTSDVARMIRLARDQARLTTLDYATQLFDDFMELHGDRNFRDDG
                     AVVGGIGFLAGQPVTVIGIQKGKNLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPV
                     VTFINTAGAYPGVGAEERGQGEAIARNLMEMSDLKVPIIAIIIGEGGSGGALALAVAD
                     QVWMLENSMYAVLSPEGFASILWKDGSRAMEAAELMKITSYELENLQVVDRVVLENGR
                     ATKEVLADIKENLVSQFAQLQALPLDELLEKRYQRFRKY"
     gene            13970..14431
                     /locus_tag="U1021_001235"
     CDS             13970..14431
                     /locus_tag="U1021_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4711779.1"
                     /translation="MLVKADLSNAEELLPIQHRAFAAVYETYQNQYNPAIEIMDYFQS
                     RFARPNCTYYKIVEEGHTVGLVRTTVAEDADQGWLGLIGIDPDHRGKSYGHKTMLELE
                     QLYPTVKRWVLCTVLQEAKLVTFYESLGYKAIKTDPEQEGIDMVYMEKWIG"
     gene            14442..15107
                     /locus_tag="U1021_001236"
     CDS             14442..15107
                     /locus_tag="U1021_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4711780.1"
                     /translation="MLETFSQRLEWICRKIWILLQAFLLLLLELIPTFILQKSTSPVA
                     QWTAGLSSIGIMVFMCWLAERKGLAIWDRKFLTWKGLGLVALTVLFTSLSTVLGHTIM
                     DLQGIEDTANQIGIDKLLRMIPFGLAFVRIACQAAISEEIIVRGYLFKKFFEKHKILG
                     IVVSGLVFAFLHGPTDLGSWIIYASPGFILAYLYYKTDYLIYPIAVHFINNAWAVVAF
                     YYL"
BASE COUNT         4311 a         2963 c         3776 g         4277 t
ORIGIN      
        1 cacctagaaa taagaaagca ttgagttacg cctgcggctt ttgatgaggc tggtcaaaaa
       61 gcctaatact cttcgaaaat caaaattatc cgttgttaac ttgccttgat gaactcctgt
      121 tctatcttcg ccttcgtttc ctaggctact tttgattttc attgagtata aaaataaaaa
      181 tagcttagaa ttgcatcgtc agaaacgtag attctaagct atttttgttt attcaaattt
      241 taattggtac tcaatgaaaa ttaaaatcag actagctcca atggagctag acactcatca
      301 aatcaagtca acaacatctg ttttgatttt cgaagagtat gaagagggaa ctgaccgacc
      361 tcgttgtgat tattgctcgt taaaaaaagc ttcatagagt gcgtgcaggg cgcgtttctt
      421 ttcttcggtt ttgacaacga acataacaga aacttcactg gctccctgtg aaatcattgc
      481 caagttgaca ttttgtttag agagggcagt ggtagcggta gctgttacac cgacatggct
      541 cttcatattt tcaccaacaa tcatgataat agataaacca tgttcgattt cggccttgtc
      601 aacttccatt ttcgtattga gttgacgaag gatctcttct tccttgatag gagtcaattc
      661 acgctcacgg actacgatgg ataaatcgtc aatcccggtc ggcatgtgct cccagcgaat
      721 attgagatct tcgagaattt gcaacacctt gcgaccaaaa ccaacttcac ggttcatcaa
      781 gtatttggac aagttaatgc tgacaaaacc atcgtctgca gcaataccga caataggaac
      841 tgtttgctcg gtatgtttgt gtacaattcg ggtaccaggg tgagttgggt tattggtgtt
      901 tttgataacc aatggaattc gtccgcgata ggcaggaagg agggcttcat cgtggaggac
      961 ggagaaacct gcataagcta attctcgcat ttcacgatag gtcaattctt tgattgaatg
     1021 tggattttta atgatgccag gatgggcagc aaaaatacca tcgacatctg taaagttttc
     1081 atagaggtca gccttgactc cggcagcaat gatggaacct gtaatatccg atccacctcg
     1141 tgagaaggta caaatctggt tatcaacagt tacaccgaag aatcctggaa taatgagtac
     1201 ttcatctgta tcacgaagct cttcgatttt gtcataactt gaaggcaaaa tgcgagcatt
     1261 tcctggttcg gagctgacaa taataccagc ttttttagga tggacatagc gtgcaggcaa
     1321 tcctctgtgg gtaaaatatt cggcaatcaa tttggcatta ttatcttcac cagctgctaa
     1381 gaatgcgtcg taaaggaatt cgttatcatc aattggtagg ctggccaaag agatgatgct
     1441 gtctgcgatt ttcttcatgc tgttagctgt gaaaccaagt tcgtcaacca ttgcctgata
     1501 acggttgatg atccattctt gactggcagt cacatctttt ccgttaacat attctttata
     1561 atatttaatc aacgcatcag taactttagt atcctcggca ttgcgttttc caggtgcaga
     1621 caccacaaca aagcgacgtt ctgaatcaga ttgaacaata ttgaaaactt tttctaactg
     1681 tccagctgaa gcaagtgagc ttcccccaaa tttaataact ttcattttca tctccttgga
     1741 tatttttttc tattatagca gaatgatatg aaattgtcag tatgttcaga caaatcttgc
     1801 caagaatttt atcgaaaaac gaacaagaga caagtatgaa aatttcagaa aaacattttt
     1861 ttctttcaac tgtgttacag ttaaaggaat aggaggcgat tatggtaaaa gcaattattt
     1921 tcgacatgga tggtgtactt tttgacacag aaacatttta ttttcaacgt cgagtggatt
     1981 ttttagcgac aaaaggttta tcggttgatc atttggctcc atctatattt gtcggtggaa
     2041 gggctagtca aatttggcaa cggattttag gggatgatta tgataactgg gatgtccctg
     2101 ccttggaaga agaatatcgt gtgtataaag aaaagcgacc aaccccttat gcagagagga
     2161 tttttcctga agttaaagcg gtattggaga gactaactat ccaaggtatt cctgtagttt
     2221 tggcttcaaa tactgaccgt tcagaaatcg aacgtgctct actagatgct ggtatacgct
     2281 ctcactttag tcatattttc tcagcgatgg attgtgaggc tccaaaacca gatcccacag
     2341 tttatatgaa agcagccagt gcaacaggag tagctaaatc ggacatttta gtatttgaag
     2401 atagtgcgaa ggggattgaa gcggctaaaa aagcaggttt gacagtttgg gctattcgag
     2461 accagcatta tggaattgat cagtcgaaag cagataaatt ggtagacaat cttgaagagg
     2521 cctttgactt attgcgattt taagaaatat gatattgtat ccaagtatta gttcttggtg
     2581 aaaaatggta tttctagctc agaatccagt tagagcttcc aaaagtatta acgtgaaaaa
     2641 atgaaagttg taaattaaac ttagagccta taatttacag ttcagacttg aatattgagg
     2701 ttgttttttc aaaatacagt cagtatttcc cgcaaaaact accttgatga gtgaaaaagc
     2761 caaggcgctt tgcgtgtgaa tataggttct tagacacgtt attttctagc atatctaaat
     2821 tttatattgc gatgatggcc tccatctttt tcggacgtca cactttcctt gctagaaaaa
     2881 agtgacaatt ttaaaaactg tgttacaatg gaaaacaaga atttgaagtt tgatattcaa
     2941 atcttttaat tatcaaacta ttttgaaagg agcaagggaa tggactacca aacaattcgt
     3001 tatgaagtaa ttgattccgt agcgattcta actttaaaca gaccggaagt ggcaaatggt
     3061 tttaatattc ctatgtgtga agaaatctta gaagcaatcc gccttgcaga aggggatgcc
     3121 tccgtcaaaa ttttacaaat tcaagcacag ggttccattt tctccgtggg tggagattta
     3181 gttgagatga agcgtgcagt ggatgatgat gatattgctt ctttagtaaa aatagcagag
     3241 ctggtgaatg atatttcgtt tgcgatgaag aaattgtcta aagtagtcat tatggtgaca
     3301 gatggggcag tggctggagc cgcggctaat atggcagtgg cagctgattt tgttattgcc
     3361 tccagcaaga caaaattcat ccaagccttt gtaggcgttg gacttgcgcc ggatgcgggg
     3421 gggctctttc tactgagtcg tgctattggg gctaatcgtg ctagtcactt ggcgatgact
     3481 ggagagggct tatcagcgga taaggcttta gaatatggga ttatttataa attggcagag
     3541 ccagaaaaac tagaaaagac agttgcccag gtcataaaaa aactcttgcg aggctcagta
     3601 aactcttatg cagcaatcaa acaactgaca tgggaaagcc aatttaaaga ctgggagtct
     3661 tatcgccgat tagagctgga tttgcaagaa acattggcat ataaagagga ttttaaagag
     3721 ggagttcgag cgcatgcaga acgacgtaga ccagtgttta cgggagatta atttttaaat
     3781 tcgtaaaaaa atgtttgaca atcaaagttt tatggtttat actttgacta tcaaagtaaa
     3841 ggaggcctgt tttggaagat ccaaaagtaa atgaatatct aacggccatt tttaataatg
     3901 tgttggtgat tgaagaaaca agtctgcgtg gtagccgatt caatgatatt tcgattaagg
     3961 aaatgcacac gattgatgtg ataggaagta ttgatggagc tactccgagt gatgttgctc
     4021 ggactttgat ggtaaccttg ggtactgtta caactagctt gaacaatttg gaaagaaaag
     4081 gatatgttga gcgtattcgt tcgaccaaag atcggcgagt tgttcatctc tacctgacca
     4141 aaaaaggtcg actggtctat cgtttgcatc aacgatttca caatgaaatg gtgaaacaga
     4201 ttacagatgg tatggatgaa acagagtatc aggtaatgaa gaaaggactc atgaaactct
     4261 atcacttctt ggaggatttg aaatgagaaa ccatgctaaa atcagtcagg tggcccacta
     4321 tcttccgaag aagattgtga ccaatgatga tttggcccag caaatggata ccagtgatga
     4381 gtggattcgt agccgtacag gtatcggtca acgacacatt gttactggag agacgacgag
     4441 tgatttggct agtcaagtgg ctagaaaatt actggaaaag tctcagctag atgctagtga
     4501 aattgacttc atcatcgtag caacgattac tccagatgct tcaatgccat ctacggcagc
     4561 tatggttcaa gcagcaattg gcgcgaaaaa cgcttttgcc tatgatctcg ttgcagcttg
     4621 ttcaggattt gtttttgcgc tatcaacagc ggaaaaattg cttgcttcag gagtctataa
     4681 gagaggactt gtcattggtg cagagaccct atctaggtct gttgactggt cggatcgatc
     4741 aacggctgtt ttatttggag atggtgctgg aggagttttg ctggaagcgt gtgaacaacc
     4801 gaccttttta gcagaaatct tgcgaacgga tggcggtcga ggtgctagtc tgacagcagg
     4861 gatagaccag aaagagacgc cattctcgac acaaagccgt cagcaaccct ttatccaaat
     4921 ggagggtaga gctatatttg aatttgctac gagggatgtt acggcaacca tggcagagct
     4981 gctagaacaa gctgatatga ctgtggattg cgttgattat ttcttgctcc atcaagccaa
     5041 tatacgtatt ctggataaga tggctcgtaa attgggagtg gcgcgtgaaa aatttccagc
     5101 aaatatggat aaatatggca ataccagcgc agcaagtctt cctattctct tatcagaatg
     5161 tgtagagagc ggaatgttgc gattggatgg aagtcaaaca gtccttatgg ctggtttcgg
     5221 tggaggcctc acatggggaa ctctactctt acaactttag ttaattcctt gccctaggca
     5281 agattaaaat attttatttt ccaaaaggag acacatatca tggcagtatt tgaaaaagta
     5341 caggaaatca ttgttgaaga attgggtaag gatgctgaag aagtaactct tacaacaagc
     5401 tttgaagatt tggacgcaga ttcattggat cttttccaag ttatctctga aatcgaagat
     5461 gcattcgaca tccaaatcga cactgaagaa ggtttgacta ctgtaggcga tttggttgcc
     5521 tacgttgaag aaaaaacaaa ataatgactg ttaaggaaag tgctatttag catttttctt
     5581 aaaataaata ctttgataat caaaacattg agatatcaaa ctattttttg agtgaggggg
     5641 caacccttca cttgtttacc taatgatttg atattcaaat gattaggtaa gcaagaaaaa
     5701 agatgaggga attatgaaga cgaaaataat agaattgctc gatattaagt atccaatttt
     5761 tcaaggtggt atggcttggg tagctgatgg agatttggct ggtgccgtat ctaatgcagg
     5821 tggtctagga atcatcggcg gaggaaatgc tccaaaagaa gtcgttaagg caaacattga
     5881 taaagtcaag tccatcacag acaagccttt cggtgtcaat atcatgctcc tatcgccttt
     5941 tgcagatgac attgttgact tggtcatcga agaaggtgtg aaagttgtca ccacaggagc
     6001 aggaaatcca gggaagtata tggagcgtct ccatgctgca gggattacag ttgttcctgt
     6061 tgtaccaagt gtagcccttg ctaaacgcat ggaaaaactg ggtgtggatg ccgtcatcgc
     6121 tgaagggatg gaagccggag gccatattgg taaattgacc accatgacct tggttcgtca
     6181 ggttgttgaa gccgtatcta ttcctgttat tgctgctgga ggtattgcag atggtgcagg
     6241 tgctgcggca gcctttatgt tgggagcaga agcggtgcaa gttggaactc gttttgtagt
     6301 agctacagag tccaatgccc atcaggctta taaggaaaaa gttttaaaag ctaaggatat
     6361 tgatacaact gtatctgctt ctattgttgg acatcctgtg agagccatca agaataagtt
     6421 gtcatctgct tatgcagctg cagagaaaga tttcttggca ggtaaaattt cggcagatgc
     6481 tattgaagaa cttggtgcag gagcactacg taatgcagtt gttgatggtg atgtaacaaa
     6541 tggctccgtg atggctggtc aaattgctgg tctggtttct aaagaagaat cttgtgaaga
     6601 tattttgaaa gacatctatt atggagcagc caaagtgatt agagaagagg caagccgttg
     6661 ggcttcggtt ggagaatagg atgacaaaga cagcttttct ttttgcaggt caagggtctc
     6721 agacagtggg gatggcccgc gacctttacg aatattaccc gatagttaga gaaacgtttg
     6781 accaggctag tcagattctg gggtatgaca ttcgtgactt aattgacaat caagaggata
     6841 aattacatca gactcgctat acccagcctg cgattttgac aacttccctt gctatttatc
     6901 gtttattggc agaaaagagg attaaacccg acatggtggc tggtttgtcc ttgggagaat
     6961 acgcagcctt ggttgcttca ggtgctctgg tcttcgaaga tgccattgcc ctgattgcca
     7021 aacggggtga gtttatggag acggctgcac cagcagggac tggtaagatg gtcgctgtcc
     7081 ttaatgcaga tgtcagcttg atcgaagagg tctgttcatc tgttacctct gggattgttt
     7141 ctccagccaa ctacaacaca ccagcccaaa tcgttatcgg tggcgaggtg gcagctgtag
     7201 atgaggcagt ggaagccttg aaggcggcgg gtgtcaaacg catgattccc ctcaatgtgt
     7261 cggggccttt ccatacggct ctcttgcgtc cagcgtcgga gcaattggct caggccttgg
     7321 agcaggtgga attttcggac ttccaagtag agttggtcgg taatacggaa gctaaggtca
     7381 tgaaaaaaga ggacatcaag tccctcttga cccgtcaagt gatggaacca gttcgtttct
     7441 atgagtcaat cgcaaccatg caggaagccg gtgtgactaa ctttattgaa attggtccag
     7501 gtaaagtctt atcaggattt gtcaagaaaa tcgataagac ggcgcatgtt atagcaattg
     7561 aagacataga gggactacaa atagtattga ataaatcatg aggaggaatc atggaattaa
     7621 caaataaaaa tgtttttgta acaggttcaa gccgaggaat cggcttggcc attgcccata
     7681 agtttgccag tcttggtgcc aatgtggtgc tgaacggtcg tggtcagctg gggcaggact
     7741 tgctggacag cttttcaagc tacggtgtca aagtggtggc gatttcaggt gatatttcca
     7801 gctcggcaga tgccaaacga atggtagctg aggcagttga ggctcttggt agcgtcgata
     7861 tcttggtcaa taatgcaggg attaccaaag acggtatggc tcttcgtatg acagaagagg
     7921 attttgatac ggttctgaag gtaaatctta ctggaacttt taatatgacg caggctgttt
     7981 tgaaaccaat gacaaaggct cgtgagggtg ctattatcaa tctatcaagt gtatctggct
     8041 tgattggaaa tgctggacag gccaactatt ctgcttctaa ggcaggtgtg attggattta
     8101 ccaaagccat tgcccgtgag gttgctgggc gaaatgttcg tgtcaatgcg attgcgccgg
     8161 gctttatcca gtctgatatg acagatgttc tgtctgacaa gattaaagaa gctatgactg
     8221 cacaaattcc tatgaaacgc tttggtgcga cagaagaagt ggcagatgtc gctgtattct
     8281 tagccaagca agaatatcta actggacaag tgattgcggt tgacggtggc ttgaccatgc
     8341 aataagagag gtttgaaaat gacaaaacta aatcgtgtag tggtgacagg ctacggtctg
     8401 acatcgccaa ttggaaatac accagaagaa ttctgggata gcttggtcaa tggcaagatt
     8461 ggtatcggaa agattaccaa gtttgacact agtgaatata ctgtccataa tgcagcagaa
     8521 atcaaggatt ttccttttga caaatacttt gtaaaaaaag atactaaccg ctacgacaac
     8581 tactccctct atgctctcta tgcagctcgt gaggcagtag ccaatgccaa acttgataca
     8641 gaagctgtcg acagtgaccg ttttggtgtt atcttgtcga ctggtatcgg tggaattttg
     8701 gaaattgaag agcaggtggc tcggatgaac gaaaaaggtc caaaacggat tcgtcctatg
     8761 gcacttccaa aggccttgcc aaacatggct gctggaaata ttgctatgca ggtcggtgcc
     8821 aatggtgtct gcaagtgtgt tatcacagcc tgtgcttcgt caaatgatgc cttaggagaa
     8881 gccttccgtg aaatcaagtt tggcttccaa gatgtgatgt tggcaggtgg agcagaagca
     8941 gccattactc catttgcaat cggtggtttc caagctttga cagctatgtc gactactgag
     9001 gatccagaac gtgcgtctat tccatttgac aaggaccgca atggttttgt catgggagag
     9061 ggttccgcgg ttttagtatt ggaaagtttg gaacatgcag aagcgcgtgg ggcgactatc
     9121 ttggctgaaa tcgttggtta tggaaatact tgcgatgctt atcacatgac ttcgccacat
     9181 ccagaaggtc tgggtgctat taaggccatg aagttggcca tttcagaagc aggtttggag
     9241 ccagctgata ttgactacat caatgcccat ggcacttcga caccggctaa tgaaaaaggg
     9301 gaaagccaag ctatcgtatc cgtcttcggc aagaacacgc cagtttcttc taccaagtcc
     9361 ttcactggtc acttgttggg tgcagcgggt gccgttgaag cggcagctgt cattgaggct
     9421 atgcgtcatt cttacgcacc aaagacagct ggtacgacag aattatctga agctattgaa
     9481 gcggatgtca tttatggaca ggggcgtgat atggaaatcc gccatgccat ttcaaataca
     9541 tttggctttg gaggtcacaa ctcggtgatt gctttcaaac gttgggaggc ttaagtgaat
     9601 attacagaaa taaaggactt gatgagtcag tttgaccagt caagtttgcg agaattttca
     9661 tatagcaatg ctggggaaac cttgcatttc agtaaaaacc agcaggcgac agcggttccg
     9721 agtccaatcg taaaagctcc gcttgcacca gtagctcctg caagcccagc ccctgtgcca
     9781 gcagttgaaa ccagtgaggc aactccagta gaagttagct caagctctgt ggcagagggt
     9841 gcggtagtgg aaagtccact tgttggtgtg gcctatttgt caccagctcc tgacaagcca
     9901 gcctttgtag cagttggtga tacggtcaaa aaagggcaga ccctcatgat tatcgaagcc
     9961 atgaaggtca tgaacgaagt gcctgctgat cgtgatggtg tggtcacaga gattttggtg
    10021 gtcaaccagg atgttgtaga atttggacaa ggattggtac gcatcaaatg attgatattt
    10081 tgaaaattaa agaggcacta cctcatcgct accctatgct cttggtcgat tgtgtccttg
    10141 aagtatcgga agatgagatt gtcgccctca aaaatgtgac cattaacgag cccttcttca
    10201 acgggcattt cccagactat cctgttatgc caggtgttct catcatggag gctttggctc
    10261 aaaccgcagg tgtcttggag ttatcaaagg aagaaaacaa gggcaagctg gtcttttatg
    10321 ccggcatgga caaggttaaa tttaagaaac aagttgtacc tggtgaccag ttgatcatga
    10381 cagctaaatt tgtcaaacgc cgtggaacca ttgcggtcgt tgaggcaaag gcagaggtgg
    10441 acggaaaact ggctgcgtcg ggggtactaa cctttgccat tggaaattag tatctaaagg
    10501 agataggatt catcatgttt gagaagattt tgattgccaa tcgtggtgag attgcggtgc
    10561 ggatcattcg tgcggccagg gaattaggga ttgcgaccgt ggctgtctat tcagaggcgg
    10621 acaaggaagc tctccaaacc atgttggcag atgaggctgt ctgtatcggc ccagcccgtt
    10681 cgacagactc ctatctcaat atgcaggcgg tcatctcggc ggctgttgtg acaggtgccc
    10741 aggctattca cccaggcttt ggatttttga gtgaaaactc taaattcgca accctttgtg
    10801 aagaggttgg tatcaaattt atcgggcctt ctggtacggt catggatacc atgggcgata
    10861 aaatcaatgc acgtgcagag atgattaagg ctcaagtgcc tgtcattcca ggatcggacg
    10921 gcgaagtttt gaccagccaa gaagctcttg agattgctga gaagattggt taccccgtca
    10981 tgctcaaggc atcggcaggt ggtggcggta aggggattcg gaaggttgaa aaagccgaag
    11041 acctagttcc agccttcgaa tcggcttcca gcgaagccaa ggcagccttt ggcaacggag
    11101 ccatgtacat ggagcgtgtc gtctatccag cccgccacat cgaagtacag attttggcgg
    11161 accagcacgg tcatgtcatc catctgggag aacgggattg ttctcttcaa cgcaacaacc
    11221 agaaggtctt ggaagaagct ccgtcgattg ctatcggcca gaccatgcgg gaccgtatcg
    11281 gtcaagcagc ggtgcgggct gcccaatcag tcggctatga aaatgcggga accattgagt
    11341 tcctcttgga cgaagccaag ggcgaattct acttcatgga aatgaataca cgggtgcagg
    11401 tggaacatcc tgttaccgaa tttgtcacgg gtgtggacat tgtcaaggag caaatcaaga
    11461 tcgcggctgg tcaggaactc agcgtccgtc aagaagatgt gaagattaca ggtcatgcca
    11521 ttgaatgccg tatcaatgct gagaatccag cctttaactt tgccccaagt ccaggtaaga
    11581 tttccaacct ctacctgcca agtggtggcg ttggtttgcg tgtagattca gctgtttacc
    11641 ctggctacac cattccgcct tactatgatt cgatgatagc caaggtcatc gtgcacgggg
    11701 aaaatcgttt tgaagccctg atgaagatgc agcgagccct ctacgaattg gaaattgacg
    11761 gagtggtgac caatacggac ttccagctgg acttgatttc cgacaagcga gtggtggctg
    11821 gtgattatga caccgcctat ctcatggaag aatttttacc ccgctatcaa gcagaattat
    11881 agtcttttag tttactttta gtactaggaa acgagccaca ggcataactc aatgctttct
    11941 tgtttctagg cattgacttg aaacagtccc ccagactgtt tcgatcaggc aaggcgagtt
    12001 caaacactcc agtggagtgt ttgaagttgg aaatagaggc tgggcaaaaa gcccagcacc
    12061 gcttctcaac gttagtgtca acatctcagc gcagtggttg attagcagat ttgttcgtgt
    12121 tttacactcc aaatctgacc taatcaactg tgcgggggtg ggaagacgaa ctcttctatg
    12181 aatggtcgag ttctttccca ctccctcatt cgtcgaagta ataaaagtca actaaatgac
    12241 gataaaaaaa gtaaactagg agaatgctat ggctttgttt cgcaaaaagg acaaatatat
    12301 ccgcatcaat cccaatcgtt cgcggataga gtcagcacct caagcaaagc cagaggtgcc
    12361 agatgaactc ttttccaaat gtcctgcttg taaggtcatc ctttacaaga atgatttggg
    12421 accagagaaa acctgtcaac actgttccta taattttcgg attacagccc aggaacgttt
    12481 ggctttgaca gttgatgaag gctcgtttaa ggaattgttt acagggattg aaaccactaa
    12541 tccgctggac tttccaaatt atctcgaaaa actggcagcc acccgtcaaa aaacgggctt
    12601 ggatgaggct gttttgacag gtaaggcgac catcggcgga caaccagttg cccttggaat
    12661 catggattcg cattttatca tggcctctat gggaacggta gttggtgaga aaattacccg
    12721 cctctttgag ttggcgattg aagagcgttt gccagttgtc ctctttaccg catccggtgg
    12781 tgctcgcatg caggaaggca tcatgagcct gatgcaaatg gctaagattt cggcagctgt
    12841 aaaacgccat tctaacgctg gcctctttta cctgacggtc ttgacagacc ccacaacagg
    12901 aggtgtgacg gctagttttg ctatggaagg tgatattatc ctggctgaac cgcagacctt
    12961 ggttggtttt gcaggacgac gggttattga gtcaactgtg cgtgaaaatc tgccagatga
    13021 tttccagaag gctgaatttt tacaagaaca cggctttgtc gatgccattg tcaaacgtca
    13081 ggacttgcca gcgaccatta gtcgcttgtt gagaatgcat ggaggtgtca gatgaccagt
    13141 gatgtagcac gtatgatccg tttggcacgt gaccaggctc gcctgaccac cttggactat
    13201 gccacacaac tctttgatga ctttatggaa ttgcacggtg atcggaattt ccgtgatgat
    13261 ggagcggttg tcggtgggat tggcttttta gcaggtcagc ctgtgacagt tatcggtatc
    13321 caaaagggta agaacctcca ggataatctc aagcgtaact tcggtcagcc ccacccagaa
    13381 ggctaccgca aggctcttcg tcttatgaaa caggcggaga agttcggccg tcccgttgtc
    13441 acctttatca atactgctgg agcttatccc ggtgtcggtg ccgaggagcg tggacagggt
    13501 gaggccattg cccgcaacct catggagatg agcgacctca aggtgcccat tatcgctatt
    13561 atcatcggcg agggcggctc tggtggagca cttgccctgg cagtcgcaga ccaggtctgg
    13621 atgctggaaa actccatgta cgccgtcctc agccccgaag ggttcgcctc tatcctctgg
    13681 aaagacggca gtcgggccat ggaagcggca gaactcatga agattacctc ttacgagttg
    13741 gagaacctcc aagtggtcga tcgggttgtt ttggaaaatg gcagagcgac taaggaagtc
    13801 ttggctgaca tcaaggaaaa cctagtcagc cagtttgctc agttacaagc cttgccactt
    13861 gatgagctac tcgaaaaacg ctatcaacga ttcagaaaat actaggaaga cctagtattt
    13921 ttttgtgata tttgatataa taaataaaat agtttctagg aggttttcca tgttagtaaa
    13981 agcagatcta tcaaacgcag aagaattgct acctattcag caccgagcat ttgcagctgt
    14041 gtatgaaacc tatcagaacc agtataatcc tgccattgaa attatggact atttccaatc
    14101 acgctttgca cgaccaaatt gcacctacta caagattgtt gaggaagggc acacagtcgg
    14161 tttagtgcga acaacggtcg ctgaagatgc tgaccagggc tggctaggct tgattggcat
    14221 tgatccagac cacagaggaa aaagctatgg tcacaagact atgttagagt tagaacaact
    14281 ttatccaacg gttaagaggt gggtgctctg cacggtctta caggaagcaa agttagttac
    14341 tttctatgag agtctaggct acaaggccat taaaaccgat cctgagcagg agggtataga
    14401 tatggtctat atggagaagt ggataggata ggaggttaga aatgctagaa acattcagtc
    14461 aacgattgga atggatttgt aggaaaatct ggattttact gcaggccttt ctattgttgc
    14521 ttcttgaact cattccaact ttcatattgc aaaaatccac ctcgccagtc gctcaatgga
    14581 ctgccggcct atcttctatt ggaataatgg tctttatgtg ttggttggca gaaaggaaag
    14641 ggcttgccat ttgggataga aaattcctga cctggaaggg acttggattg gttgcactga
    14701 ccgtactatt taccagcctt tctactgtct tagggcatac tatcatggac cttcaaggga
    14761 ttgaagatac ggctaatcag attggtattg acaagctgtt gcgaatgatt ccctttgggt
    14821 tagcctttgt tagaattgcc tgtcaggcag ctatttcaga ggagatcatt gtcagaggct
    14881 atctattcaa aaagtttttt gaaaagcaca agattttggg aattgtggtg tctggtttgg
    14941 tatttgcttt tctgcatgga ccaacagatt tgggctcttg gattatttat gctagtccag
    15001 gttttatctt ggcttacttg tactataaga cagattatct gatttaccca atagcagttc
    15061 atttcataaa taatgcttgg gcggtggtgg ctttctacta tttataaaac tgcaataaaa
    15121 tatagctctt gaaagctgga agaatgccct cttaactaac cttgttagga actatcagat
    15181 tttcctattg gataattaat caacgcttta gaaaatacta ggaatactta gtatttttta
    15241 ttggtttcta ttgacaaata tcctgtatcg ttgtattata agtatattac aaaagctaat
    15301 tacataatcc tttgattatg tatcaga
//
LOCUS       DASFQD010000052        15284 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.052, whole genome shotgun sequence.
ACCESSION   DASFQD010000052 DASFQD010000000
VERSION     DASFQD010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 15284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15284
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.052"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            114..668
                     /locus_tag="U1021_001237"
     CDS             114..668
                     /locus_tag="U1021_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009911037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM4711781.1"
                     /translation="MNITLKKNLKTTIAGLVAGISLLTAGVVSAETYTVKSGDTLSEI
                     AETYNTTVEKLAEQNKITNLDFIHVGQVIELGDVTVKAVESSVEQTQSTSTSTATVTT
                     STYSSNLSAEDAAAKEWIAMKESSGSYDARNGIYIGRYQLTNTYLNGDYSPENQERVA
                     DAYVASRYGSWSAAKAFWLENGWY"
     gene            complement(1124..1996)
                     /gene="sdaAA"
                     /locus_tag="U1021_001238"
     CDS             complement(1124..1996)
                     /gene="sdaAA"
                     /locus_tag="U1021_001238"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="HEM4711782.1"
                     /translation="MFYTIEELVQQADNFSGNVAELMIATEIELTGRSREEILTIMSR
                     NLTVMKASIVDGLTESKSVSGLTGGDAAKLDAYMKSGKTLSDSSILSAARNAMAVNEL
                     NAKMGLVCATPTAGSAGCLPAVLGVAIDKLNLTEEQQLDFLFTAGAFGLVIANNASIS
                     GAEGGCQAEVGSASAMSAAALTLAAGGSPYQASQAICFVIKNMLGLICDPVAGLVEVP
                     CVKRNAMGASYAMVAADMALAGIESKIPVDEVINAMYQVGSALPTAFRETAEGGLAAT
                     PTGRRLAQEIFGED"
     gene            complement(2009..2680)
                     /gene="sdaAB"
                     /locus_tag="U1021_001239"
     CDS             complement(2009..2680)
                     /gene="sdaAB"
                     /locus_tag="U1021_001239"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent
                     subunit beta"
                     /protein_id="HEM4711783.1"
                     /translation="MTNLKFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFGDEPT
                     EVEFQLYNSFAKTYRGHGTDVALVAGILGMDTDDPRIPDSLDIARERGIKVYWRVNKD
                     SNTPHPNTTRIIIKNDKKSISATGVSIGGGNIQVTELNGFSVNLNMNTPTIIIVHQDV
                     PGMIAKVTDVLSKYDINIAQMNVTREKAGEKAIMIIEVDARQCENSIAEIEKIPHLHN
                     VTFFN"
     gene            2895..4019
                     /gene="mnmA"
                     /locus_tag="U1021_001240"
     CDS             2895..4019
                     /gene="mnmA"
                     /locus_tag="U1021_001240"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006153390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEM4711784.1"
                     /translation="MSIDNSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDD
                     TDENGFCTATEDYKDVAAVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRSGRTPNPDV
                     MCNKEIKFKAFLDYAMNLGADYVATGHYAQVSRDEDGTVHMLRGADNGKDQTYFLSQL
                     SQEQLQKTMFPLGNLQKPQVREIAERAGLATAKKKDSTGICFIGEKNFKEFLGQYLPA
                     QPGRMMTVDGRDMGEHTGLMYYTIGQRGGLGIGGQIGGDNEPWFVVGKDLSKNILYVG
                     QGFYHESLMSTSLQASQVHFTRDMPEEFVLECTAKFRYRQPDSQVTVKVKGDKAEVIF
                     AEPQRAITPGQAVVFYDGQECLGGGMIDMAYKDGEACQYI"
     gene            complement(4062..4451)
                     /locus_tag="U1021_001241"
     CDS             complement(4062..4451)
                     /locus_tag="U1021_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000106206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEM4711785.1"
                     /translation="MSTNLEIFNAYNNALIAGDFAALFETMADDIIWHQPGNHSTSGA
                     KIGKEVLGAHLATFAEKTNGTFKVVTNWVSDNDTLVAANVTFLGTRTDGEELNMNGID
                     LFRMEDGKIKEVWLFSADQKAEDAFWG"
     gene            4577..4903
                     /locus_tag="U1021_001242"
     CDS             4577..4903
                     /locus_tag="U1021_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4711786.1"
                     /translation="MKKVSEYGICPFATTQKVLTGKWGLVIIYQLSTGKKRFNELQRL
                     IPGITQTMLTRHLRQLEEDRIISRTVYAEVPPRVEYSLTEMGEKFRSVLDAVEAWGLE
                     YIETLT"
     gene            5045..5493
                     /locus_tag="U1021_001243"
                     /pseudo
     CDS             5045..5493
                     /locus_tag="U1021_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647566.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
     gene            5490..7406
                     /gene="mnmG"
                     /locus_tag="U1021_001244"
     CDS             5490..7406
                     /gene="mnmG"
                     /locus_tag="U1021_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011999579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEM4711787.1"
                     /translation="MTHTFAENYDVIVIGAGHAGVEAGLAASRMGCKTLLATINLDMV
                     AFMPCNPSIGGSAKGIVVREIDALGGEMGRNIDKTYIQMKMLNMGKGPAVRALRAQAD
                     KAEYAAEMKRTVERQENLTLRQTMIDEILVEDGKVIGVRTATNQKFSAKAVVVTTGTA
                     LRGEIIIGDLKYSSGPNNSLASITLADNLKELGLEIGRFKTGTPPRVNARTINYDETE
                     IQPGDEKPNHFSFLSRDEDYLQDQIPCWLTYTNATSHEIINSNLHRAPMFSGIVKGIG
                     PRYCPSIEDKIVRFADKERHQLFLEPEGRNTDEIYVQGLSTSLPEDVQKDLIHSIKGL
                     ENAQMMRTGYAIEYDMVMPHQLRATLETKKISGLFTAGQTNGTSGYEEAAGQGIIAGI
                     NAALKVQGKPELILKRSDGYIGVMIDDLVTKGTVEPYRLLTSRAEYRLILRHDNADMR
                     LTEIGRQVGLVDDERWQVFQIHKKQFDNEMKRLESIKLKPIKETNEKVVAMGFKPLTD
                     ALTAKEFMRRPDVTYADVVAFVGPAAEELDAKTIELIETEVKYEGYIAKALEQVEKMK
                     RMEEKRIPADIDWDDIDSIATEARQKFKLISPETIGQASRISGVNPADISILMVYLEG
                     RSRSISKNKSKDSH"
     gene            7513..9474
                     /locus_tag="U1021_001245"
     CDS             7513..9474
                     /locus_tag="U1021_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HEM4711788.1"
                     /translation="MKRFRFSTIHFVMIGVILFGLVALVHRFFPIGASTVFALLISLL
                     VLIALFIYQKHSYEFSELEQIEYLNNQANSGLMMLLDKMPVGVIKVRPDSNQVEWFNP
                     FAELIFAQENGEFDQKKLREIIDVGLDEERIYANFSGKRYAVNVDFDQGLFYFFDAST
                     EYSATNSLIGSRPVIGIISVDNYDELEDAVTDSQISQVNSFLAQFVSEFCHDYGIYYR
                     RGTMDRFYFFTDYAVLEKLIENKFSVIDKFREEAKKLDLGLTLSMGLAYGNENHHQIG
                     QVALQNLNMAEVRGGDQVVVKENDESKQPLFFGGGSASSVKRTRTRTRAMMTAVSDKL
                     KSVDAVFVVGHRNLDMDALGSAVGMQYFAQNIMNNAYTVYNPDEMAPDIARAIKKLSD
                     ENCSNLLTVEEAMKMVTFQSLLIMVDHSKIGLTLDKDFYDQFTQVVVVDHHRRDTDFP
                     NNAVLTYIESGASSASELVTELIQFQNDKHHKLNRIQSSLLMAGIMLDTKNFTSRVTS
                     RTFDVASYLRTRGSDSLEIQQIAATDFEEYRQINELILSGQRIEANVVIACADDTKEY
                     DNIIPSKAANTILDMAGIEAVFVVTRNTKGYVSISARSHSKINVQRIMEEMGGGGHFN
                     LAAAQVYDQTIAEVCEKLTDKIREEINGN"
     gene            9485..9937
                     /gene="rplI"
                     /locus_tag="U1021_001246"
     CDS             9485..9937
                     /gene="rplI"
                     /locus_tag="U1021_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEM4711789.1"
                     /translation="MKVIFLADVKGQGKKGEIKEVPTGYAQNFLIKKNLAKEATNQAI
                     SALRGQEKSKEKAHAEMIAEAEAIKAKLAEEATLVKFVEKVGPDGRTFGSITSKKIAE
                     ELDKQFGIKIDKRHIQLDHPIRAIGLIDVPVKIYQDVIGIINLSIKEA"
     gene            9969..11324
                     /gene="dnaB"
                     /locus_tag="U1021_001247"
     CDS             9969..11324
                     /gene="dnaB"
                     /locus_tag="U1021_001247"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEM4711790.1"
                     /translation="MAELDELRVQPQDILAEQSVLGAIFLDEGKLVFVREYIEAEDFF
                     KHAHKLIFKAMIALSDRNEAIDATTMRNYLVNHGDLENIGGLAYLAEIISSVPTAANA
                     EFYAKIVAEKSNLRKLIARLTDAVNQAYEGADGSDDIIANAEKALIDVSEGASRSGFK
                     RIDDVLNINFDNLETRAKQTSDITGIATGYPALDAMTTGLHEEELIILAARPAVGKTA
                     FALNIAQNIGTKLGLTVAIFSLEMGAESLVDRMLASEGVINSRAIRTGHLTQEEWNKY
                     MVAQANLARASIYIDDTPGIKITEIRSRSRKLAQETGNLGLILIDYLQLITGTGRENR
                     QQEVSEISRQLKILAKELKVPVIALSQLSRGVEQRQDKRPVLSDIRESGSIEQDADIV
                     AFLYRDDYYERGEQEDGGIPNNTVEVIIEKNRSGARGTVELMFQKEYNKFASISKRED
                     G"
     gene            11328..11579
                     /locus_tag="U1021_001248"
     CDS             11328..11579
                     /locus_tag="U1021_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001278154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711791.1"
                     /translation="MSDAFTDVAKMKQIKQDIKDHEGQIVELTLENGRKREKNKQGRI
                     VEVYQSLFIVEFEDPNNTFVESYTYSDILTEKILIHYLD"
     gene            11790..12401
                     /gene="rpsD"
                     /locus_tag="U1021_001249"
     CDS             11790..12401
                     /gene="rpsD"
                     /locus_tag="U1021_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014407971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEM4711792.1"
                     /translation="MSRYTGPSWKQARRLGLSLTGTGKELARRNYVPGQHGPNNRSKL
                     SEYGLQLAEKQKLRFSYGLGEKQFRNLFVQATKIKQGTLGFNFMLLLERRLDNVVYRL
                     GLATTRRQARQFVNHGHILVDGKRVDIPSYRVEVGQVISVREKSIKVPAILEAVEATL
                     GRPAFVSFDAEKLEGSLTRLPERDEINPEINEALVVEFYNKML"
     gene            complement(12496..13662)
                     /locus_tag="U1021_001250"
     CDS             complement(12496..13662)
                     /locus_tag="U1021_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000704663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4711793.1"
                     /translation="MKIIEVKKKNGATVYRASVYLGVDQVTGKKVKTKVTGRTHKEVK
                     QKAQQEKIAFQQDGFTRFQATSIASYQELAELWWESYKHTVKPNTQDNVKKLLDNHVL
                     PLFGVYKLDKLTTPLIQSIVNKLADKTNKGEPGAYLHYDKIHALNKRILQYGVTMQAI
                     SSNPARDVVLPRNTQKAKRKKVKHFENQDLKKFLDYLGELDLTKYRNLYEATLYKFLL
                     ATGCRINEVLALSWSDIDLENATISITKTLNHLGQINSPKSKASYRDIDIDQATITML
                     KAYQLRQIQEAWKLGRTETVVFSDFIHDYPSNKTLGTRLKTRFKRAGVPNIGFHGFRH
                     THASLLLNSGIPYKELQYRLGHSTLSMTMDIYSHLSKENAKKAVSFYETALKAL"
     gene            complement(14580..14822)
                     /locus_tag="U1021_001251"
                     /pseudo
     CDS             complement(14580..14822)
                     /locus_tag="U1021_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001107589.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            14971..15198
                     /locus_tag="U1021_001252"
     CDS             14971..15198
                     /locus_tag="U1021_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000195665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4711794.1"
                     /translation="MAQWTLKACRVNAGYTLRQVANKVGKNFQTISKYEKDSTLIPFE
                     LLKDLSELYHVKLDDIFLGDSTKKIELTSEE"
BASE COUNT         4411 a         2855 c         3512 g         4506 t
ORIGIN      
        1 agcgttttta ttgtctaatc tcaatttgtc tgtaatattt gtaacaattt cacaaagtct
       61 aagtaatagt tagagggtat gatagacaca tgacagaaag gaatgtgact attatgaaca
      121 ttacattaaa gaaaaactta aaaacaacta ttgctggttt ggtagcggga atctcccttt
      181 taactgcggg tgtagtcagt gcagaaacct atactgtaaa gtctggtgat accctgtctg
      241 aaattgctga aacatacaat actactgttg aaaaattagc agagcagaat aagattacca
      301 acttagattt tatccatgtc ggtcaagtta tcgaattggg tgatgtgaca gtgaaggcag
      361 tagagagttc agttgaacaa actcaatcaa catcaacttc taccgcaaca gtaacgacta
      421 gcacctattc ttcaaatttg agtgctgaag atgcagcagc aaaagaatgg attgcaatga
      481 aggaatcaag cggtagctat gatgcccgta acggtatcta cattggtcgt taccagttga
      541 caaatactta cttgaatggt gattactcac cagaaaacca agagcgtgta gcagatgctt
      601 atgttgctag tcgctatggt tcatggtctg cagccaaggc tttctggttg gaaaatggtt
      661 ggtactaaga taaattagaa gaggtctagc acgatgctag actttttctg tctcacgaat
      721 gtatttcaca actgcttttt cgttcagtcc aacggtactg aatagtagcc tctagcccaa
      781 aacttttgat ttccacgctg tatggacata ggtgatggaa aatatcaatt aagtcccgtc
      841 taatttttta gtaaatggat tttctgcggt acttaggagt gacatacatt tggtatgtga
      901 taaactgtaa cggttttaac catgctaaac tagtccactg gactagttta ctcctccttt
      961 atttaacttg acaaattaga ttataacagg aaaaaaatag aagctcaaag ccttgctagc
     1021 caccagcata ggtagtagtt ttcttgtttt tctctatgag aaaactagcc cgaaggcata
     1081 ataagaaaaa ggacgttagg gtcctttttg gtttacatta ttgtcaatct tctccaaaaa
     1141 tttcttgagc aaggcgacga cccgtcggtg tagctgcaag gcctccttcg gcagtttcac
     1201 ggaaggcggt tggtagggca gatcccactt ggtacatagc gttgatgact tcatcaacag
     1261 ggatttttga ttcaattcct gccagtgcca tatcagcagc taccatggcg tagctggcgc
     1321 ccattgcatt tcgtttgaca catgggactt ctaccagacc agcgacaggg tcacagatta
     1381 atcccagcat gtttttaatg acaaagcaga tagcttgact agcctggtag ggacttcctc
     1441 cagcagcaag ggttaatgcc gctgcggaca tagcagaggc agagccgact tctgcctgac
     1501 agcctccttc tgctccagag atggaggcgt tgttggcaat gactagaccg aaagccccag
     1561 ctgtaaagag gaaatcaagt tgttgctctt ctgtcaagtt taacttgtca atagcaacac
     1621 caagaacggc aggcaagcaa ccagcagagc cagcagttgg tgtggcacag accaagccca
     1681 ttttggcgtt taactcgttg acagccatag catttctagc cgcggacaag atagaagagt
     1741 ccgacagagt cttaccactt ttcatgtagg catctaactt ggcagcatcg cctcctgtta
     1801 aaccagatac ggatttgctt tcagtaagtc catctacgat ggaggctttc ataactgtca
     1861 agtttcttga cataattgtc aatatttctt cgcggctacg accggtcaac tcaatttcag
     1921 tcgcgatcat gagttcagct acattaccag aaaagttgtc tgcttgctga actaattctt
     1981 cgatagtata aaacatgtct ttctctttct agttgaagaa ggttacattg tgcaggtgtg
     2041 gaattttttc aatttctgca atagaatttt cacattggcg agcatccact tcgataatca
     2101 taatggcttt ttcgccagct ttttcacgtg tcacgttcat ttgggcgata ttgatgtcat
     2161 acttagaaag aacatcggtc actttcgcaa tcataccagg gacatcttgg tgaacaataa
     2221 taatagttgg cgtattcata tttagattga cagagaagcc gttgagctct gttacttgaa
     2281 tgtttccccc accgatggaa acgcctgtgg ctgagatgga ttttttatcg ttttttatga
     2341 tgattctggt ggtattggga tgtggggtat tgctgtcctt gttgacacgc cagtaaacct
     2401 taatgcctcg ttctcttgca atatcaagag agtcaggaat gcggggatca tccgtatcca
     2461 tgcccagaat acctgctacc aaggctacat ccgtaccgtg accacgatag gtcttggcaa
     2521 aggaattata gagttgaaat tccacctctg tcggctcatc gccgaagatg gaagacacaa
     2581 ttttcccaat tcggaccgcc ccagctgtgt gactagaaga tggaccaatc ataacaggtc
     2641 caataatatc aaagaccgac tgaaatttta agtttgtcat agtaatcctc acgtttttct
     2701 tggtactatt atatcaaatt ttccagttag agaatatgcc tagatgaatg tgttttctta
     2761 tgttaaaatt ctatcgctta ccctttttat atggtataat acaagttgtt caaaatcgtc
     2821 aatcgttttt ggataatcaa attttggaat acgaccttca aatcgttatt tctacgaaaa
     2881 gatgggagaa gattatgtca attgacaatt ctaaaacccg tgttgttgtc ggtatgagtg
     2941 gcggtgtgga ttcatcggtt acggctctct tgctcaaaga gcagggctac gatgtgattg
     3001 gcatcttcat gaaaaactgg gatgacacgg atgaaaatgg tttctgtaca gcaacagaag
     3061 attataagga tgtggctgct gttgcagacc aaatcggcat tccttattac tctgtcaact
     3121 ttgaaaaaga gtattgggat cgcgtatttg agtacttcct agcagagtat cggtcaggac
     3181 gcacacccaa tccagatgtc atgtgtaaca aggaaatcaa gttcaaggct ttcttagatt
     3241 acgctatgaa cttgggtgcg gactatgtgg cgacaggtca ctacgctcag gtatcacgcg
     3301 acgaggacgg cactgtccat atgctgcgtg gggcagacaa tggcaaggac cagacctact
     3361 tcctcagcca actctcacag gaacagctgc agaaaaccat gtttccgctc ggcaatttac
     3421 aaaagcctca ggtgagggaa atagcagagc gagcaggctt ggcgacagct aaaaagaaag
     3481 actcgacagg catctgcttt atcggtgaaa agaacttcaa agaattttta gggcagtatt
     3541 tgccagccca gcccggtcgg atgatgaccg ttgacggtcg tgatatggga gagcatacag
     3601 gcctcatgta ctataccata ggtcagcggg gcgggcttgg tatcggagga caaatcggag
     3661 gggacaatga gccttggttt gtggtcggaa aagatctgtc caaaaatatc ctctatgtcg
     3721 gacaaggctt ctatcatgag tccttgatgt caacttcttt acaagctagt caagtccact
     3781 ttacacgaga tatgcctgaa gaattcgtgc ttgaatgcac agctaagttc cgctaccgtc
     3841 aaccagacag tcaagtgact gtcaaggtaa aaggggacaa ggcagaagtt atctttgccg
     3901 agccacagcg ggccatcaca ccaggacaag ccgttgtttt ctatgacgga caagaatgtc
     3961 taggaggcgg catgattgac atggcctata aagatggaga ggcttgtcag tatatttaat
     4021 caaaaataaa agcttagcac cctcgtgcta agctatttat cttatcccca gaaagcatct
     4081 tcagcttttt ggtcggctga gaagagccaa acttccttga ttttgccatc ttccatacgg
     4141 aaaagatcga taccattcat gtttagttct tcaccatctg ttcgggtacc gaggaatgtt
     4201 acgttagcgg caacaagagt atcattatct gacacccagt ttgtcactac tttgaaagtt
     4261 ccatttgttt tttcggcgaa agttgctaga tgtgctccga gtacttcttt accaatttta
     4321 gcaccagatg ttgaatgatt tccgggttga tgccagataa tgtcatctgc catagtttca
     4381 aaaagagctg caaaatcacc agcgatgaga gcattgttat aggcattaaa aatttccaag
     4441 tttgttgaca tttgatgtcc tccaattttt ttgatatagt acaattatag tggaagtaat
     4501 caattataca agtaggtact tttgcatttg ttgatatcaa aagtgatact attgagataa
     4561 ataaaggaga atttttttga aaaaagttag tgaatatggt atttgtcctt ttgcaacaac
     4621 gcaaaaagtc ttgactggta agtggggatt ggttattatc taccaactca gtacaggaaa
     4681 gaaacgcttc aatgaattac agcgactaat tccagggatt acccaaacca tgttaacaag
     4741 gcaccttaga caattggagg aggatcgcat tattagtcgt acggtctatg cagaagttcc
     4801 ccctcgtgta gagtacagct tgaccgaaat gggcgaaaaa tttcgttcgg tgctggatgc
     4861 tgttgaggct tggggcttag aatatattga aacgttaacg taacaccaga tttgaaattc
     4921 tacaaatctt ttgatagaat aagagtaaca atcatcatga tggtcaaagc tcatggaaat
     4981 tgtaggcttt tttgtcctgc aattttcgag agttttggct attttttgcg attggggaga
     5041 gaagatggat tttagaacca gagttgacaa ccaaattttc ggtgttcgtg cctctgcatt
     5101 gattataaaa gatgggaaaa tatttctcac gaaggattct aagggtcgtt attacaccat
     5161 tgtcggagcg atagcagtca acgaaaggtt gttcgagaag tcaaagaaga attagggatt
     5221 gacagtcgtg tcaatcaact ggcttttgtt gtcgaaaatc aatttacaca tgaaggcata
     5281 gattttcaca atatcgagtt tcattttatc gtgaatccta ttggagaaat ccctgagaag
     5341 atgattgaag ataacttgaa acaagcttgt gaatggattg acgttgacaa acttgtcaac
     5401 ctagatgttg tgccagtctt tctggcagag gaattgccaa actggaatgg gcaagccaaa
     5461 cacatcatga atatgaagga gaaaacaaca tgacacacac atttgcagaa aactacgatg
     5521 tcatcgtgat cggagcgggg catgcgggtg tagaagcagg attggcagcc agccgcatgg
     5581 gctgtaagac cttgcttgca actattaact tggatatggt ggcctttatg ccttgtaatc
     5641 cctccattgg tggctctgcc aaggggattg tggtaagaga aattgatgcc ttgggtggcg
     5701 aaatgggtcg caacattgac aagacctata tccagatgaa gatgctcaat atgggcaagg
     5761 gaccggctgt tcgtgccttg cgggctcagg cagataaggc agagtacgca gcagagatga
     5821 agcggacggt ggagcgtcag gaaaatctga ccctgcgtca aaccatgatt gatgagattt
     5881 tagtggaaga cggcaaggtt atcggtgtcc gcacggctac caaccagaaa ttttcagcca
     5941 aggcagttgt ggtgacgacg ggtacagctt tgcgtggtga gattatcatc ggggacctca
     6001 aatattcgtc agggcctaac aacagcttag cttccatcac gctggcagat aatttgaaag
     6061 agctaggtct agaaatcggt cggtttaaga caggaacgcc accgcgtgtc aatgctcgta
     6121 ccattaacta cgacgaaacc gagattcaac caggagatga aaaaccaaac catttttcat
     6181 tcttgtccag ggatgaggat tacttgcagg accagattcc ttgctggctg acctatacca
     6241 atgcgaccag ccatgaaatt atcaacagca atcttcatcg ggcacctatg ttttcaggga
     6301 ttgtcaaggg gattggtcca cgttactgtc cgtctattga ggacaagatt gttcgttttg
     6361 cggataagga acgccaccag cttttcctag agccagaagg ccgtaatacc gacgaaatct
     6421 atgttcaagg gttgtcaacc agtctgccag aagatgtgca gaaggacttg attcactcca
     6481 tcaaaggttt ggaaaatgct cagatgatgc ggactggcta tgctattgag tacgatatgg
     6541 tcatgcctca ccagttgcgg gcaacactgg aaaccaagaa gatttctggg ctctttacag
     6601 caggtcaaac caacggaacg tcgggttatg aagaagcggc tggtcagggg attatcgctg
     6661 gtatcaatgc ggccctcaag gtgcagggca agcctgagct gattttgaaa cgaagcgacg
     6721 gctatatcgg ggttatgatt gatgatctgg tgaccaaggg aacggtggag ccttaccgcc
     6781 tcttgaccag tcgagcagaa taccgcttga ttttgcgtca tgacaacgcg gatatgcgtc
     6841 tgacggaaat cggtcgtcag gtgggcttgg tggatgatga acgctggcag gttttccaaa
     6901 tccacaaaaa acagtttgac aatgagatga aacgcttgga gtctatcaaa ctcaagccaa
     6961 tcaaggaaac caacgaaaag gttgttgcca tgggctttaa accactgaca gatgctctga
     7021 ctgccaaaga gtttatgcgt cgtccagatg tgacctatgc ggatgtggta gccttcgttg
     7081 gtcctgcggc agaggaattg gatgctaaaa ccattgaatt gattgaaacg gaagtcaagt
     7141 acgaggggta cattgccaaa gccttggagc aggtggagaa gatgaagcgc atggaagaaa
     7201 aacgcattcc agccgacatt gactgggatg atattgactc cattgcgacc gaggctcgcc
     7261 aaaaattcaa gctgatttca ccagaaacca ttggccaggc tagtcggatt tccggtgtca
     7321 atccagcgga tatatccatt ctcatggtct acttggaagg acggagccgt tccatttcta
     7381 aaaacaaatc aaaggacagt cactaaggct gttcttttcg ctgtatgtca gctatatgtc
     7441 aactacttta aaatcatgtg aaaagtagct tttttactga atttatggta gaatggcagg
     7501 cagaggttag tgatgaaaag atttcgattt tcgacaattc actttgtcat gataggtgtc
     7561 attttatttg ggttggtggc tcttgtccac cgattttttc caattggtgc cagtacagtt
     7621 tttgcgctac tcatcagcct attggtgttg attgcgctgt ttatttatca aaaacattct
     7681 tatgaattta gtgagctaga acagattgaa tatctcaata atcaggccaa ttctggtttg
     7741 atgatgctct tggataaaat gccagtggga gttatcaaag ttcgaccaga tagtaatcag
     7801 gtagaatggt ttaatccctt tgctgagctg atttttgctc aagaaaatgg ggagtttgat
     7861 caaaaaaaac tacgtgaaat tattgacgtt ggtctggatg aggagcgaat ttatgcaaac
     7921 ttttcaggca agagatacgc tgttaacgtt gattttgatc aagggttatt ttactttttt
     7981 gatgcgtcga cagagtattc agcgacaaat agtttgatcg gaagccgtcc tgttataggg
     8041 attatttcag ttgataacta tgatgagctt gaggatgctg taactgattc tcaaattagc
     8101 caagtcaatt ccttcttggc tcaatttgtt tcggaatttt gccatgatta cggtatctac
     8161 taccgacgcg gcacaatgga tcgattctat ttctttacag attatgctgt gttggaaaaa
     8221 ttgatagaga ataagttttc agttattgat aagttccgcg aggaggctaa aaagttagat
     8281 ttaggtttga ctttgagtat gggattggcg tatggtaatg aaaatcatca ccaaatcgga
     8341 caggttgcgc tccaaaatct caatatggct gaggttcgtg gtggagacca ggttgtggtc
     8401 aaggaaaatg atgagagtaa acagccactt ttctttggcg gtggctcggc ttcttccgtt
     8461 aaacgaacac gtacgcggac tcgtgctatg atgactgctg tatcagataa actcaaatcg
     8521 gttgatgctg tttttgtggt gggacatcgt aatttagata tggacgcgct tggatccgcg
     8581 gtcggcatgc agtactttgc tcaaaatatt atgaacaatg cctatacggt gtataatcca
     8641 gatgaaatgg caccagatat tgcacgtgcc atcaagaagt tgagtgatga aaattgttct
     8701 aatttgctaa cggttgagga agccatgaag atggtcactt tccagtcgtt gttaatcatg
     8761 gtagatcatt caaagattgg cttgactttg gataaggatt tctatgacca atttacccag
     8821 gttgtggtgg ttgatcatca tcgtcgcgat acagatttcc caaataatgc agttttgact
     8881 tatatagaga gtggtgctag ttctgcgagt gagttagtaa cggaattaat tcagttccag
     8941 aatgacaaac accataagct taatcgcatt caatctagtt tattgatggc tgggattatg
     9001 cttgatacaa aaaatttcac ctctcgtgtg actagtcgta cttttgatgt ggctagttac
     9061 ttgcggactc gtggtagcga tagcttggaa atccagcaga ttgctgcgac agattttgag
     9121 gaatatcgtc aaatcaatga actgatttta agcgggcaga gaattgaggc caatgttgtt
     9181 attgcgtgtg cagatgatac taaagaatac gataatatta ttccgagtaa ggctgccaat
     9241 acaatattgg acatggcagg aattgaggcg gtattcgttg taacaagaaa taccaaaggg
     9301 tatgtatcta tttctgcaag gagtcatagt aaaatcaatg ttcaacgcat catggaagaa
     9361 atgggtggag gtggccactt taacctagct gccgctcagg tatatgacca gacaatcgca
     9421 gaagtatgtg aaaagttgac ggataaaatc cgtgaagaaa taaatggaaa ttaggagaac
     9481 agatatgaaa gtaatctttt tagcagatgt taaaggtcaa ggtaaaaagg gtgagattaa
     9541 ggaagttcca acaggttacg cccaaaattt cttgatcaag aaaaatttgg ccaaggaagc
     9601 aacaaaccaa gcaatcagcg cccttcgtgg tcaggaaaaa tctaaggaaa aggctcatgc
     9661 agagatgatt gcagaagcag aggctatcaa ggctaagttg gctgaggaag ctactttagt
     9721 gaaatttgtc gaaaaagttg gtccagatgg ccgtaccttt ggttctatta ccagcaagaa
     9781 aattgctgaa gaattggaca agcaatttgg catcaagatt gataaacgcc atattcagct
     9841 ggatcaccca attcgtgcga ttggtctcat tgatgtacca gttaaaatct atcaagatgt
     9901 aataggcatc attaatttga gtattaagga agcttaatta tttatctagc cagtgaggag
     9961 gtgagatctt ggcagagttg gatgaattgc gggtgcaacc gcaggatatt ctagctgaac
    10021 aatcggtatt aggagctatt ttccttgatg aaggcaagct ggtcttcgtt cgtgaataca
    10081 tcgaagctga agattttttc aaacatgctc ataagctaat ttttaaagct atgattgctc
    10141 tttctgatag aaatgaggca attgatgcga ctaccatgcg taactattta gtgaaccatg
    10201 gtgatttgga aaatatcggt ggtttggcct atttggctga aatcattagt tccgtgccga
    10261 cggcagccaa tgcggaattc tatgccaaga ttgttgctga aaagtctaat ctccgtaaac
    10321 tgattgcccg tttgacggat gcagttaatc aggcttatga gggtgcggat ggttcagatg
    10381 acattattgc caatgctgaa aaagctttga ttgatgtcag tgagggagcc agtcgaagtg
    10441 gtttcaagcg gattgatgat gtcttgaata tcaactttga caaccttgaa actcgtgcta
    10501 aacagacgtc ggatattaca gggattgcaa ctggctatcc tgctcttgat gctatgacaa
    10561 cgggtctgca tgaggaagag ttgattattc ttgcggctcg tcctgcggtt ggtaagacgg
    10621 cttttgccct caatattgct caaaatatcg gtacaaaact gggtttgaca gttgccatct
    10681 tttctttgga gatgggtgca gaaagcttgg ttgaccgtat gctcgcttca gagggagtta
    10741 tcaattcgag ggctattcgt acggggcatt tgacgcagga agaatggaat aagtacatgg
    10801 tggctcaagc taacctggct cgggctagta tctatattga tgatacacca ggtatcaaga
    10861 ttacagagat tcgttcgcgt tcacggaagt tggctcagga aacgggcaat ctgggtttga
    10921 tcttgattga ctatcttcaa ttaattacgg gaacaggtcg ggaaaaccga caacaagagg
    10981 tttctgagat ttcccgtcag ttgaagattt tggccaagga attgaaagtt cctgttatcg
    11041 ccctcagtca gttgtcgcgt ggtgtggaac agcgtcagga taagcgacca gttttgtctg
    11101 atattcgtga atctggatct atcgagcagg atgcggatat cgttgccttc ctgtatcgtg
    11161 atgattatta tgagcgcggt gagcaggaag acggtggtat tcccaataat acggttgaag
    11221 ttatcatcga gaaaaaccgt tccggtgcgc gtggtaccgt ggaactgatg ttccaaaaag
    11281 aatacaataa atttgcaagt atttccaaga gggaggatgg atagagaatg agtgatgcat
    11341 ttacagatgt tgctaaaatg aagcaaatca aacaagatat taaagaccat gagggacaga
    11401 ttgtcgagtt gacccttgaa aatggtcgta agcgtgagaa gaataagcag gggcgtattg
    11461 tagaggttta tcagtctctc tttatcgttg aatttgaaga tccaaacaat acctttgtgg
    11521 aatcttatac ttactcagac attttgacag aaaagatttt gattcattat ttggattaat
    11581 cgctatataa ggctttacag agcctttttt ttgtgctata ctaatctttg tatgaaataa
    11641 cagcagggca aaatgaagct cgtcaacaga aggtcagcaa gaagagtaat cgttgctgtt
    11701 tcgatgaagg tctcctgcac gaatcaggtt tgcttaaaac gttatttcct acaaataatt
    11761 tttatatttt attttaggag gacataacta tgtcacgtta tacaggacca tcttggaaac
    11821 aagctcgtcg tcttggcttg tcattgacag gtacaggtaa agaattggca cgtcgtaact
    11881 atgtaccagg tcaacacgga ccaaacaacc gttctaaatt gtcagaatac ggtttgcaat
    11941 tggctgagaa acaaaaattg cgtttctctt acggtttggg tgaaaagcaa ttccgtaact
    12001 tgttcgtaca agctactaaa atcaaacaag gtactcttgg tttcaacttc atgcttcttt
    12061 tggagcgtcg tttggacaac gttgtttacc gccttggttt ggcaactact cgtcgtcaag
    12121 cacgtcaatt cgtaaaccac ggtcacatcc ttgttgatgg caaacgcgtt gatattcctt
    12181 cataccgcgt tgaagttggt caagttatct cagttcgtga gaagtcaatc aaagttccag
    12241 ctatccttga agctgttgaa gcaactcttg gacgtccagc ttttgtatca ttcgatgctg
    12301 aaaagcttga aggctcattg actcgcttgc cagaacgcga cgaaatcaac ccagaaatca
    12361 acgaagctct tgtcgtagaa ttctacaaca aaatgcttta attttaagaa atatcttacg
    12421 aaaagcctac aaccgtgggc tttttgcttt gtcttaaaat gttgatttct gggtttgctc
    12481 ccctttttgc tccccctaga gggcttttag tgctgtttcg taaaacgaga cggctttttt
    12541 tgcgttctct tttgagagat ggctataaat atccatggtc atggatagag tggaatgacc
    12601 taggcggtat tgtaattcct tgtaaggtat tccagagtta agcagtaaac tagcgtgggt
    12661 atggcggaaa ccatgaaaac caatgttagg aactccagca cgtttaaacc gagtttttag
    12721 acgagtaccc agagttttgt tacttgggta atcatggata aaatcagaga atacaactgt
    12781 ttcagttcgc cctaacttcc aagcctcttg aatttgtcta agctggtagg cttttaacat
    12841 ggtaatagtc gcctggtcta tatctatatc ccgatagctt gcttttgatt ttgggctatt
    12901 gatttgccct aggtggttta gtgtcttggt aatgctgatg gttgcattct ccagatcaat
    12961 atcagaccag ctaagcgcta ggacttcatt gatacggcaa ccagtagcca gcaagaactt
    13021 gtatagggtg gcttcataca gatttctgta cttggttagg tcaagctctc ccagatagtc
    13081 gagaaacttt tttaggtctt gattttcaaa atgcttgacc ttttttctct tagctttttg
    13141 agtgttacga ggtaggacga catcacgcgc agggttggaa gatattgctt gcatggtcac
    13201 accatactgt aaaatacgct tattaagcgc gtggatctta tcataatgca gataagcccc
    13261 aggctcccct ttgttggtct tgtcagccag tttgttaact atgctttgaa tgagtggcgt
    13321 agtcagctta tcgagcttat agaccccaaa gagtggcaaa acatggttat ctagtaactt
    13381 cttaacgtta tcttgtgtgt tgggtttgac agtatgcttg tagctttccc accatagttc
    13441 agccaattcc tggtagcttg ctattgacgt agcttgaaac ctggtaaagc cgtcttgttg
    13501 gaaggctatt ttttcttgtt gggctttctg cttaacctcc ttatgtgtcc tacccgttac
    13561 tttggtcttt actttcttac ccgttacctg gtcaactccc agatatacac tagcgcggta
    13621 cacagtagca ccatttttct tttttacttc aataatcttc atggttataa acctttccat
    13681 cagcaggcaa gctgttatta aaaagatttt agaatgtttt aggtttatat catgcgtagg
    13741 cttacgagaa tagccctatt ttcgtttgtt ttaagttggt agggtaaata taccagtcat
    13801 gagctaaaag agaatacagg cgattttgga gcgtttgaca gggttgtaaa aggtgagatt
    13861 ttagagttca acacgcgccg aatgctaaca aatgctaaca tacggccgat atagaagcta
    13921 aggtttgcta aggttactaa aatatacaac ctgacaaaac cttacatttt tttggctatt
    13981 gacttttctt gacttttttc atctagtgac taaccgtgac ttttttcact ccacacagtc
    14041 cactagaaag cccctaggcg cgtggaatag ttcagtaggg taaatgtacc agagaagtgt
    14101 ttgaacgtgg tgagggggct tgtagggagc gcgggcggtt aatctgttca aagttattca
    14161 cgtttgaacc aagataaaaa attaaagtgc tttttacctt ctattaatct ttttttcagt
    14221 ggaaattctt cgtcgcttgt tggtaatttt aaattttgcg ttatctcatc acaaagatgg
    14281 attaattcag aagctacctc tttatttgat tcatttatat tgatagttcc ctcaattaaa
    14341 tttaatgctg taatgaaaag ttgatcgttt tttaatgaaa gatactcttc tctctcagaa
    14401 atttcagtta ataaatcgag aactttattt aaatttttac taagatttaa gtccaaatcg
    14461 gaatgtaaat tccaaggtga ttcgccctca ttgataatta tataatcttc ttgtgttaaa
    14521 ttcttgattc ctccgtacaa ccttccgaaa tcgaatccta aaccataaaa agtcgattct
    14581 tcttttggga taaaacgtaa atctaaatcg gattttttta catttaaaaa atcagctatt
    14641 ttttgaagat ttcccggtgt gggtaaagaa gatcccttta cgtacccagt tattgtgctt
    14701 tttggaatat ctgtattatt atgtaaatca atttgccgga ctcctttttc tttcataatt
    14761 ctattaaggt tatcagaaaa gtacgcccta ttttttatat cctgtgggct attctttgcc
    14821 atgcgattcc ctccgttcca gaaatttcta ttttgattat aacacaaaaa acgaaatagt
    14881 acgaaaaaaa taaaactttt gtttaaaaac acttgacaaa gtacgaaaaa attagtacta
    14941 tcattttatc acttttgaaa ggagcaaaaa atggcacaat ggacgctaaa agcgtgtcga
    15001 gtaaatgcag gttatacctt gcgacaggta gctaataaag taggcaagaa ttttcaaacc
    15061 atctcaaagt acgaaaaaga tagtactttg attccttttg aattattgaa agacttgtca
    15121 gagttgtatc atgttaagtt agacgatatt tttttaggcg atagtacgaa aaaaatagaa
    15181 ctaacatcag aagaataaga aagggacaag catggaatta gtttacatgg acggacggaa
    15241 agagccgtat acattgagca gtatcgtagc agaatgcgca gagg
//
LOCUS       DASFQD010000053        15274 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.053, whole genome shotgun sequence.
ACCESSION   DASFQD010000053 DASFQD010000000
VERSION     DASFQD010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 15274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15274
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.053"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            45..380
                     /locus_tag="U1021_001253"
     CDS             45..380
                     /locus_tag="U1021_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin"
                     /protein_id="HEM4711795.1"
                     /translation="MNLQKIIIGSATGILAIVAGMIVHEVKKYLIAKGGKRAVEITEI
                     LARNAVNAVEQITKLDQDKHVDKLDMAKRRVTGQLAKYNIYMTDTQLETFIESAVKQM
                     NDAWKETDK"
     gene            377..1096
                     /locus_tag="U1021_001254"
     CDS             377..1096
                     /locus_tag="U1021_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008090834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEM4711796.1"
                     /translation="MTTVFEVINFAKDLANRGQGVDYDGWYGNQCVDLPNWICGKFFG
                     KALWGNAIDLIKSAKRHGFEVHYMPTSERPRPGAIFVKNYWAGDGINYGHTGLIIGVS
                     GNTVQTIEQNLVGNLSVGGPAQYSSQQISNLVGWFYPPYSDSTAVATQSNSGNLGKVK
                     DEQGTMTVKVSLLNVRDKPGLDGKIVATYTYGEQFNYDSVYIADGYIWVSYVSRSGVR
                     RYVAAGEESNRRNVVPYGTFK"
     gene            1337..1522
                     /locus_tag="U1021_001255"
     CDS             1337..1522
                     /locus_tag="U1021_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000139836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HEM4711797.1"
                     /translation="MTERELKKIAKKQGFSKTNFGKGSHEVWKHPDGRTVTIPKPKEK
                     DYRPGTLSNILKVLYGE"
     gene            1583..1987
                     /locus_tag="U1021_001256"
     CDS             1583..1987
                     /locus_tag="U1021_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000878125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HEM4711798.1"
                     /translation="MKYNYLALFEADKENGGYSISFPDFPGAFSEADNLSEAIFNARE
                     VLEIYTIMFEDEGKEFPKPSSFKALASNLTSDDDVIQAISVDTELVRERERSKIVNKT
                     VTLPSWLVEIGKENKVNFSQLLQKAIREELQV"
     gene            complement(2157..2227)
                     /locus_tag="U1021_001257"
     tRNA            complement(2157..2227)
                     /locus_tag="U1021_001257"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2193..2195),aa:Cys,seq:gca)
     gene            2519..3295
                     /gene="rpsB"
                     /locus_tag="U1021_001258"
     CDS             2519..3295
                     /gene="rpsB"
                     /locus_tag="U1021_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEM4711799.1"
                     /translation="MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQ
                     QTVKLADQAYEFIRDAAANDAVILFVGTKKQAAEAVKDEAIRAGQYFINHRWLGGTLT
                     NWGTIQKRIARLKEINRMEEDGTFEVLPKKEVALLNKQRARLEKFLGGIADMPRIPDV
                     MFVVDPHKEQIAVKEAKKLGIPVVAMVDTNTDPDDIDVIIPANDDAIRAVKLITAKMA
                     DAIIEGNQGEDSVAAVEAEMAAEPASTESIEELVEVVEGK"
     gene            3422..4462
                     /locus_tag="U1021_001259"
     CDS             3422..4462
                     /locus_tag="U1021_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002894014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HEM4711800.1"
                     /translation="MAEITAALVKELREKSGAGVMDAKKALVETEGDIEKAIELLREK
                     GMAKAAKKADRVAAEGLTGVYVDGNVAAVVEVNAETDFVAKNAQFVELVNTTAKVIAE
                     GKPADNEAALKLAMPSGETLEEAYVNATATIGEKISFRRFALVEKTDAQAFGAYQHNG
                     GRIGVISVVEGGDETLAKQISMHIAAMKPTVLSYTELDEQFVKDELAQINHKIEQDNE
                     SRAMVDKPALPLLKYGSKAQLTDEVIAAAEEAIKAELVAEGKPEKIWDKIIPGKMDRF
                     LLDNTQVDQAYTLLAQVYIMDDSKTVEAYLNSVNASVVEFARFEVGEGIEKASNDFEA
                     EVAATMAAALGK"
     gene            complement(4629..4967)
                     /locus_tag="U1021_001260"
     CDS             complement(4629..4967)
                     /locus_tag="U1021_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol reductase thioredoxin"
                     /protein_id="HEM4711801.1"
                     /translation="MNFQDYIQDFTSVTVEQAQNLLATKERAVLFIGRATCPYCNRFA
                     PKLHKVAQDKQVTVHFLDSSQISPELQALRDHYQVPTVPGLLVAKSTGVQVRCDSSMT
                     EEEIAAFIQD"
     gene            5237..5695
                     /locus_tag="U1021_001261"
     CDS             5237..5695
                     /locus_tag="U1021_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CtsR family transcriptional regulator"
                     /protein_id="HEM4711802.1"
                     /translation="MAMKNTSDYIEEHIKAILDQVSVAELRRSELASRFEVVPSQINY
                     VIKTRFTASRGYIVESKRGGGGYIRIGRITFSDKHELVHDLLNNMGEQLSATVYADIL
                     QLLFDEGLMTEREGNLFLSTGSDEILGKDASTIRARMMRQILRRLDRKEE"
     gene            5699..8152
                     /locus_tag="U1021_001262"
     CDS             5699..8152
                     /locus_tag="U1021_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEM4711803.1"
                     /translation="MKISTGLQRVFEDAQLVAQRYACDYLETWHVLLSFVINHDTVAG
                     AVLAEYPISISDYEHATFVVTDKVYREELDSFRILPSSKRLDETASFAKKIAEVVKAK
                     ELGTEHLFMAMLLDKRSTASQILDKVGFCFEDSDDKFRFLDLRKNLEARAGFTKEDLK
                     AIRSVMKGGKAKPANMGQMMGMPPAPQSGGLEDYTRDLTALAREGKIEPVIGRDAEIA
                     RMIQILSRKTKNNPVLVGDAGVGKTVLALGLAQRVAAGDVPVSLAKMRVLELDLMNVI
                     AGTRFRGDFEERMNNIINDIEEDGQVILFIDELHTIMGSGSGIDSTLDAANILKPALA
                     RGTLRTVGATTQTEYQKHIEKDAALVRRFAKVTIEEPTVEDSIAILTGLKGTFEKYHR
                     VRIGQATVETAVTYAKRYLTSKNLPDSAIDLLDEASATVQNRVKGQAEETGLTSIDKA
                     LMDKKYKTVSKLLIKTKEDAEASQNYDIEVTEEDVLETLSRLSGITVAKLSQSDTKKY
                     LNLEAELHKRVIGQEEAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTELAKA
                     LAEVLFDDESALIRFDMSEYMEKFATSRLNGAPPGYVGYEEGGELTEKVRNKPYSVLL
                     FDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGF
                     GALDLSKDHKEVEKRIFEELKKAYRPEFINRIDEKVVFHSLTESHMQDVVKVMIKPLL
                     AVTAEKGITLKLQPSALKLLAKQGYDPEMGARPLRRLLQTKLEDPLAEMLLRGDLTTG
                     STLKVGVKGEELKFDVVKG"
     gene            8271..8762
                     /locus_tag="U1021_001263"
     CDS             8271..8762
                     /locus_tag="U1021_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HEM4711804.1"
                     /translation="MNQTIAVVFGTFVPMHKGHLDLIERAKLACGQVCVVVSGYDRDR
                     GDRIGLDLAKRFQFAQEQFKEDDLVRVCALDETDLPAYPDGWDLWLDRLLALLDLSEH
                     QVPIFYVSEEEYAQELHSRGYQAHFSPRKFGISATLIREQPQQYQDYIAPAFLAFFEK
                     ESL"
     gene            8960..9343
                     /locus_tag="U1021_001264"
     CDS             8960..9343
                     /locus_tag="U1021_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711805.1"
                     /translation="MKKNLLKKTIVCFINLLVVLMAVAPPAVSAQAASRIETPVETKS
                     KHFSNLEGGGDLSYINLSGYSNRFGTAASGRSGTYFGPRGTYVTRDWSVNSGGGSHGG
                     SYWKLFNRNGQRIGTYDKYGNYLRP"
     gene            9363..9596
                     /locus_tag="U1021_001265"
     CDS             9363..9596
                     /locus_tag="U1021_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711806.1"
                     /translation="MQIIQLNNFEIKISERLHSIYDGKNKILVIFPDHTAICCQVKLS
                     QTGGFLVDTFWGVEYEISGNMVTIYYTDEEELE"
     gene            9593..9835
                     /locus_tag="U1021_001266"
     CDS             9593..9835
                     /locus_tag="U1021_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711807.1"
                     /translation="MKQYLFRQHTIHVHPSLNVFIGNDEAEMVLYSKEPDFTLLALLR
                     WLPDKNSIRIINRWKLTYEYDGNNNIYIHYDSDYRY"
     gene            complement(9949..10953)
                     /gene="dusB"
                     /locus_tag="U1021_001267"
     CDS             complement(9949..10953)
                     /gene="dusB"
                     /locus_tag="U1021_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEM4711808.1"
                     /translation="MANLNTPFMIGDVEIPNRCVLAPMAGVTNSAFRTIAKEMGAGLV
                     VMEMISEKGLLYNNEKTLHMLHIDDNEYPMSIQLFGGDAEGLKRAADFIQTNTKANIV
                     DINMGCPVNKVVKNEAGAKWLKDPDKIYHIIKEVTSVLDIPLTVKMRTGWNNTDLAVE
                     NALAAESAGVSALAMHGRTREQMYTGTVDLETLTKVAGSLTKIPFIANGDIRNVQDAR
                     QRIEEVGADAVMVGRTAMGNPYIFNQINHYLETGEVLPDLSFDDKLNVAFDHLTRLTN
                     LKGESVAVREFRGLAPHYLRGSAGAAKIRGAVARAETIEQVQELFDQAREAYQERIAK
                     "
     gene            complement(10946..11812)
                     /gene="hslO"
                     /locus_tag="U1021_001268"
     CDS             complement(10946..11812)
                     /gene="hslO"
                     /locus_tag="U1021_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEM4711809.1"
                     /translation="MDKIIKTLSKSGHFRAFVLDSTETVKTAQEKHDTMASSTVALGR
                     TLIANQILAANEKGDTKITLKILASGAIGAIISVANTKGQVKGYIQNPDLDYKRTATG
                     EVIVGPLVGNGQFLVITDYGTGHPYNSMTPLISGEIGEDFAYFLTDSQQTPSAVGLNV
                     LLDEEDKVKVAGGFLLQVLPGATEAEIARFEKRIQEMPAISSLLASENHIEALLSAIY
                     GDDDFKRLSEEEIGFVCDCSKDRFLDALASLPKADLQEMKEEDKGVDITCQFCQTHYH
                     FDENDLEELING"
     gene            complement(11892..15011)
                     /locus_tag="U1021_001269"
     CDS             complement(11892..15011)
                     /locus_tag="U1021_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4711810.1"
                     /translation="MKIRNHSLFYTVGSVAVTAGLLLSLATSPIPSVHATEVAIENYP
                     SLAITKSEVTIQGYLIAPLNSSGTAFDATNKTNLALGASMDTAAADTIPIQLKEPLRS
                     QFNLVDHPELVGKLVRITGTSDTYMKRAGIKPATAIEIVDSSSTNVQPPTSENTTTES
                     SDLVSTPIATVRSGAQGTEYTVSGKIISLVNGWGGNGFYLQDSDGAGIYIYPGAALGY
                     QPGDTVQLTGTLGEYKGELQLTTVSNHKAISEHFNAPITETNIAQLATQAQATLVSLK
                     NLTVGDIQSDSYQNSTFTVTDSEGQTVDVRLDSRTGIKTADLLNHINKGDKINLTAIL
                     STYNGKIQLKPFDLSHFEVVEKATTETAPGKTETVTVGHIQGASHQSPLTNQSVILKN
                     VVVTYVTSANNFYVQDVTPDGDVKTSDGINIFTDKLKTNVKVGDLVTIAGRVEEYLGK
                     GYTERGKTDLTITQIRATEVTVDGTAPVPSPIVLGLDRTIPADIIDNDGLAQFDPEQD
                     ALDFWESVEGMVVAVDDAKILGPLKNKEIYVTPATSQLPLNNVGGVNLRPEGNNTNII
                     PLLLKNGKQIVKSGDYFTGRIAGPVTYSYTNYKVYVDDSTLPTLHEGATKPETTTIVP
                     NDDKLTIASYNIENFSADSKSTSDAKVQRIAKSFVSDLHSPDIIGLIEVQDNNGATND
                     GTTDASKSAERLIAAIQAAGGPIYTYVDIAPENNKDGGQEGGNIRVGFLYNSKRVSLS
                     DKPSGTATQAIAWENGELNLSLGRIDPTNPAWAAVRKTLAAEFIFKGEKVVVLANHLN
                     SKRGDNGLYGKIQPVSFKSEEKRHILAQIIADFTKAGLAQNPNANIVMLGDFNDYEFT
                     KTIEILETGGMANLVSRHDASDRFSYFYNGNNQSLDNMLVSTNLLERYAFDMVHVNSA
                     FMEEHGRASDHDPLLVQLDVTKAQEPTQPEPSDKQTDDSGTVNNSDDNGTTNNNKPTN
                     LSTSNQTAVNTDDRSGATDKGQTTVTPTANNSQKKILPKTGGETSFVLITIGLVILSA
                     CLVKKQKES"
BASE COUNT         4324 a         2918 c         3624 g         4408 t
ORIGIN      
        1 ggcatatatt gtgagttgcc attgaagaag gagaattgat atgaatcaac ttacagaaaa
       61 ttattattgg gtctgctaca ggtatcttag ctatcgttgc tggtatgatt gtccatgaag
      121 tcaagaagta tctgattgcc aaaggtggta agcgagcagt cgaaattaca gagattctgg
      181 cgcggaatgc cgtcaacgca gttgagcaga ttaccaaatt agaccaagat aagcacgtcg
      241 ataagctaga tatggccaaa cgtcgtgtaa caggtcagct tgctaaatac aacatctata
      301 tgactgatac acagttagag acctttatcg aatcagcagt gaagcaaatg aacgatgcct
      361 ggaaggagac tgacaaatga caacagtatt tgaagttatc aacttcgcca aagaccttgc
      421 caatcgtggt caaggtgtag actatgatgg ttggtacggt aatcaatgtg tagacctacc
      481 taactggatt tgtggcaagt ttttcggcaa agctctttgg ggcaacgcca ttgatttgat
      541 taaatcagca aagcgacacg gattcgaggt gcattatatg cctacctcag aacgtccacg
      601 tccaggggct atctttgtca agaattactg ggcaggtgac ggtatcaact atgggcacac
      661 cggattgatt atcggtgtta gtggcaatac cgtccaaaca atcgagcaga acctggtagg
      721 taatttgtcc gtcggtggtc ctgctcagta ttctagtcag caaatcagca atcttgtcgg
      781 ctggttttat ccaccttata gcgactctac tgcagtggca acgcagtcaa acagcggtaa
      841 tctcggtaag gtcaaagacg agcaggggac aatgaccgtt aaagtatctt tgctcaatgt
      901 ccgagacaag cctggcctag atggtaaaat tgtggctact tacacttatg gcgagcaatt
      961 taactatgat tcggtctata ttgccgatgg atacatttgg gtatcgtatg ttagccgtag
     1021 cggtgtacgt cgctatgtag cagcaggcga ggagtcaaat cggcgcaatg tggtgcctta
     1081 tggtacgttt aaatagtatt ttcaccccag cgtttgctgg gctttttttg tttgcctgaa
     1141 atacagtaaa atacagtagt ctattcgttc aaaattgcca ttttgtcaat aatggttgcg
     1201 agatttgatt tctattttga taaaatgggc aaaatgacaa aaaagaaaaa catttgtaaa
     1261 aaatacgtgt ttatagttga caagtgttaa aaacaagtgt ataatataat taaagataag
     1321 gaaaggagat aagccaatga cagagcgaga gcttaagaag attgctaaga agcaaggttt
     1381 cagtaaaaca aactttggca aagggtctca cgaggtttgg aaacatccag acggacggac
     1441 agtgacgata ccgaaaccta aagagaagga ttacagacca ggcacactaa gcaacattct
     1501 caaagtcttg tatggggagt gagtgaactc ctccctgtcc cccctaaagg ggttactcta
     1561 atcattggct taatctatca ctatgaaata taattattta gcattgtttg aagcagataa
     1621 ggaaaatggt ggctacagca tttctttccc tgatttccct ggagcattta gcgaagctga
     1681 caatctaagt gaagccattt tcaacgctcg tgaagttctt gaaatctata ccatcatgtt
     1741 tgaagacgag ggtaaagaat ttcctaaacc atcatcattc aaagcacttg caagcaacct
     1801 aacaagcgat gatgatgtga tacaggctat ctctgttgat accgaacttg tccgtgagcg
     1861 tgaacgctct aaaatcgtca ataagaccgt cacactacca agctggcttg ttgaaattgg
     1921 aaaagaaaac aaggtcaact ttagccagct attacaaaaa gcaatccgtg aggaattgca
     1981 ggtatagtaa ttctctctgt gatagcagag agtttttctc tttttcaaaa ggtattcgtc
     2041 cgaaattcgt ccgaaattat tttcaaactt aaccgaattt aaccgaatga aaaatcaaaa
     2101 aagcccgaaa aatcgggctt ttgacttgta taaattcgga taaaatccta taataaaggc
     2161 ggtagacgga tttgaaccga cgatcaagct tttgcagagc cgtgccttac cacttggcta
     2221 taccgccata acaaagaata ttgtatctta aatcctggaa atggtcaagt ggaaatttta
     2281 gaatcagccc aatttccaga ttttacggta gactagaact tactttgaga atttttggat
     2341 ggcagatttt catgaatttc tctgctattt tacttgaaaa catacaggta ttctgatata
     2401 ctaatagagt tgctgtgcaa caaatactca tctcggacca attgtggtct tgttgccgaa
     2461 aggttgggct gcaagtcgaa gttcgggaga ggagaaaaaa caaaaaggag aaatactcat
     2521 ggcagtaatt tcaatgaaac aacttcttga ggctggtgta cacttcggtc accaaactcg
     2581 tcgctggaat cctaagatgg ctaaatacat cttcacagag cgtaacggta tccacgttat
     2641 cgacttgcaa caaactgtaa aattggctga ccaagcttac gaattcatcc gtgacgctgc
     2701 agcaaacgac gcagttatct tgttcgtagg tactaaaaaa caagctgctg aagctgttaa
     2761 agacgaagct atccgtgcag gtcaatactt catcaaccac cgttggttgg gtggaactct
     2821 tacaaactgg ggtacaatcc aaaaacgtat cgctcgtttg aaagaaatca accgtatgga
     2881 agaagatgga actttcgaag tgcttcctaa gaaagaagta gcattgttga acaaacaacg
     2941 tgctcgtctt gaaaaattct tgggcggtat cgctgacatg ccacgcattc cagacgtaat
     3001 gttcgttgtt gacccacaca aagagcaaat cgctgttaaa gaagctaaga aattgggtat
     3061 cccagttgta gcgatggttg acacaaacac tgatccagat gatattgatg ttatcatccc
     3121 agctaacgat gacgctatcc gcgctgttaa attgatcaca gctaaaatgg ctgacgctat
     3181 catcgaaggc aaccaaggtg aagacagcgt agcagcagtt gaagctgaaa tggcagctga
     3241 gccagcatct acagaatcaa tcgaagaatt ggttgaagtt gtagaaggaa aataagtaac
     3301 gaaggcgaat taaaatctat aggttttagc tcgtgtacaa ttccaaacaa caaaaacaat
     3361 cctagagggg cagggctgag cccgctcctc tattttataa atacaaacaa ggagaataga
     3421 catggcagaa attacagcag ctctcgttaa agaattgcgt gaaaaatcag gtgctggcgt
     3481 tatggacgcg aaaaaagcat tggttgaaac tgaaggtgat atcgaaaaag cgattgaatt
     3541 gcttcgcgaa aaaggtatgg ctaaggcagc taagaaagct gaccgtgtag cagctgaagg
     3601 tttgacaggt gtttacgttg atggtaacgt agcagcagtt gttgaagtta acgctgaaac
     3661 agacttcgtt gcgaaaaatg ctcaattcgt tgaattggta aacactactg ctaaagtaat
     3721 tgcagaaggt aaaccagctg acaacgaagc agctcttaaa ttggctatgc cttcaggtga
     3781 aacccttgaa gaagcatacg taaacgcaac tgcaacaatc ggtgagaaaa tctcattccg
     3841 tcgctttgct ttggttgaaa aaacagatgc tcaagcattt ggtgcatacc aacataacgg
     3901 cggccgtatc ggtgttatct cagttgttga aggtggcgac gaaactcttg caaaacaaat
     3961 ctcaatgcac atcgctgcga tgaaaccaac tgttctttct tacactgaat tggatgagca
     4021 attcgttaaa gatgagttgg cacaaatcaa ccacaaaatc gaacaagaca acgaaagccg
     4081 tgcaatggtt gacaaaccag cattgccatt gttgaaatac ggttcaaaag ctcaattgac
     4141 tgacgaagtg attgcagcag ctgaagaagc tatcaaagca gaattagtag cagaaggcaa
     4201 accagaaaaa atctgggata aaatcatccc aggtaaaatg gatcgcttct tgcttgacaa
     4261 cactcaagtt gaccaagctt acacacttct tgcacaagtg tacatcatgg acgacagcaa
     4321 aacagttgaa gcttacttga actcagtaaa tgcttcagtt gtagaatttg ctcgtttcga
     4381 agtgggtgaa ggtatcgaga aagcttcaaa cgactttgaa gcagaagttg cagctacaat
     4441 ggcagcagct cttggtaaat aagatataac gaagaacttc cgacagggag ttcttttttg
     4501 gcaaaatcgg tcttagggcg gatgtcggat atgcttgatt cggttatact agtatcaatc
     4561 ctaaatattt ttcataatct ccttaaaaag caccggcctt gtggtcggtg ctttttgtct
     4621 gttatgcatt agtcttgaat aaaagccgca atttcttctt cggtcatgct ggaatcgcag
     4681 cggacttgga caccagtaga tttagcgacc aggaggcctg gaacagttgg gacttggtag
     4741 tggtcgcgga gggcctggag ttctggactg atttggctgg agtcgaggaa gtggacggtc
     4801 acttgcttgt cttgggctac cttgtggagt tttggtgcga agcggttgca gtaaggacag
     4861 gttgctcgtc cgatgaagag aacagccctc tctttggtgg ctagaaggtt ctgtgcctgc
     4921 tccacagtca cacttgtaaa gtcttgaatg taatcttgaa agttcatggt ataagatata
     4981 aagggcctta agtggacaca gaaaaaatag gaaacagaac gacgactagt tctcgtttat
     5041 ctttttgccc tagtccgtag cccgtattca gttcaactaa atacggaagc cctagtcctt
     5101 tctgtttttt cttttattat aggataaagc agagcagatt tcaaaattct gctacgctag
     5161 ttgctaggct tttgctttca aaattcgtca ttttaaggta taatggtcaa agatagtcaa
     5221 agaaagaggc gatactatgg cgatgaagaa tacatcggat tatatagaag agcacatcaa
     5281 agccatcttg gaccaagtca gtgtagctga gttgcgtcga agtgaattgg ctagtcggtt
     5341 tgaagtggtg ccaagtcaga ttaactacgt cattaaaact cgttttacag ccagccgtgg
     5401 ctatattgtt gagagtaagc gtggtggtgg tggttatatc cgaattgggc ggattacctt
     5461 ttcggataag cacgaactgg tccatgattt gttaaacaat atgggtgagc agttgtctgc
     5521 gacggtttat gcggatattt tacagctcct ttttgatgaa ggattgatga cagaacgaga
     5581 aggcaatctc tttttgtcca caggatctga tgaaatatta ggaaaagatg caagtaccat
     5641 tcgagcacgc atgatgcgtc aaatactacg acgtttagat aggaaagagg aataattcat
     5701 gaaaatttca actggtttac agcgggtttt tgaagatgcc cagttagtgg cccaacgtta
     5761 tgcctgtgat tacttggaaa cctggcatgt tctcttgtct ttcgttatca accatgatac
     5821 agtcgctggc gctgttttgg cagaatatcc tatttcaatt tctgactatg aacatgcaac
     5881 ttttgttgtg accgacaagg tctatcgtga agagttggat agttttcgta ttttaccatc
     5941 ttctaaacgt ttggatgaaa cagctagttt tgccaagaaa attgcagaag tcgtcaaggc
     6001 taaggagttg ggaacggaac atttgtttat ggctatgttg ttggacaagc ggtcaacagc
     6061 tagtcagatt ttggacaagg taggtttttg ttttgaagac tcagatgata agtttcgttt
     6121 cttggatttg cgtaaaaact tggaggcacg tgcgggattt accaaagagg accttaaagc
     6181 tatccgcagt gtgatgaagg gtggcaaagc caaacctgcc aatatgggac agatgatggg
     6241 aatgccccca gcacctcaaa gtggtggatt agaagactac actcgtgatt tgacagcttt
     6301 ggcgcgtgaa gggaagattg aacctgtcat cggtcgagac gctgagattg cacggatgat
     6361 ccaaattcta tcacgtaaaa ccaagaataa cccagttcta gttggtgatg ctggtgtcgg
     6421 aaaaactgtg cttgctttgg gtcttgctca acgtgttgct gcaggtgatg ttcctgtcag
     6481 cttagctaag atgcgggttt tggaacttga cttgatgaac gttatcgctg gaactcgttt
     6541 ccgtggtgat ttcgaagagc ggatgaataa tatcatcaac gacatcgagg aagatggtca
     6601 ggtcatcctt ttcatcgatg agttgcatac cattatgggt tctggctcgg ggattgattc
     6661 gaccttggac gcagccaata tcctcaaacc agctcttgct cgtggcaccc tccgtacggt
     6721 cggagcgacg actcagacag agtaccaaaa gcatattgag aaagacgcag ccctggttcg
     6781 tcgttttgcc aaagtgacca ttgaagagcc gacagtggaa gatagcattg ccattttgac
     6841 tggtttaaaa ggtacttttg aaaaatacca cagggtccgt attggacaag caactgtaga
     6901 gactgctgtg acctacgcta agcggtattt gaccagtaaa aacctgccag attcagccat
     6961 tgacttgctg gatgaagcca gtgcaacggt acaaaatcga gtgaaagggc aggctgagga
     7021 aacaggactg acgagcatag acaaggcctt gatggataaa aaatataaga ctgtcagcaa
     7081 gcttttgatt aaaacgaaag aagatgccga ggctagtcaa aactatgaca ttgaagtaac
     7141 agaagaagat gttttagaga cacttagtcg cttgtcaggt atcacagtag ccaagcttag
     7201 ccaatcagat actaagaagt atctgaatct ggaagcagaa ttgcacaagc gtgtgattgg
     7261 gcaggaagaa gctatttctg cagttagcag agctattcgc cgtaatcagt cagggattcg
     7321 tacaggtcgc agaccgattg gctcctttat gttcttggga ccaactggtg tcggtaagac
     7381 agagcttgct aaagccttgg cagaggttct ctttgatgat gaatccgctc ttatccgttt
     7441 tgatatgtct gagtatatgg agaaatttgc gaccagccgt ctcaatggag cgccgccagg
     7501 ctacgtgggc tatgaagaag gtggcgaatt gacggaaaaa gttcgtaaca aaccttattc
     7561 tgttcttctt tttgatgagg ttgaaaaggc tcatccagat attttcaatg ttctcttgca
     7621 ggtcttggat gatggtgtct tgacggacag taagggacgt aaggttgatt tctcaaatac
     7681 cattattatc atgacgtcaa accttggagc aacagctctt cgggatgata agacagttgg
     7741 ctttggtgcc cttgatttat ctaaggatca caaggaagtg gagaaacgca tttttgagga
     7801 attgaaaaaa gcctatcgtc cagaatttat caaccgtatt gacgagaaag ttgtcttcca
     7861 tagcttgaca gaatcccata tgcaggatgt tgtcaaggtc atgattaaac ctttattggc
     7921 tgtaacagct gagaaaggaa ttacccttaa actgcaaccg tcagccctta agttattggc
     7981 taaacaaggt tacgacccag aaatgggggc tcgtccgcta cgtaggctct tacaaaccaa
     8041 attggaagat ccgttggcag aaatgttgct ccgtggtgac ttgactactg gttcgacctt
     8101 gaaggttggg gtcaagggtg aagagctcaa gtttgatgtg gtaaagggat aaggagtgct
     8161 cgttgttgct atcctttcca gatgcagaat tattcttccg ttttgaaaaa cgcatgaaat
     8221 agttggagag gtgagcttgc tcgcctcttt aacgattaga agggaaatct atgaatcaaa
     8281 ccatagctgt tgttttcgga acttttgtcc ccatgcacaa gggacacttg gatttgattg
     8341 aacgagcaaa gttagcttgc ggtcaggttt gtgtcgtggt gtcgggctat gatagggatc
     8401 gtggggatag gataggttta gacctggcca aacgatttca atttgctcaa gagcagttta
     8461 aggaagatga tttggtgaga gtttgtgcgc ttgatgaaac cgacttgcca gcctatccag
     8521 atggttggga cctttggcta gaccgcttgc ttgctttgtt ggacttgtct gagcatcaag
     8581 taccaatctt ctatgtgtcc gaggaagaat acgctcagga actgcacagt cgaggctatc
     8641 aagcgcattt cagtcctaga aaatttggta tttcagcgac cctcattcgt gaacaacctc
     8701 aacaatatca ggattacatt gctcctgcct ttcttgcctt ttttgaaaag gaaagcctgt
     8761 aaaacaacat agaaaaaacg cataaaatca ggttacagcc taggttttat gcttttttta
     8821 ctacggattt ttacggaaat tccatgtatt ctaacgaacg ttcgtaaatg tcttgtatat
     8881 atgcaaaaaa attcaaaatt ttttgactgt tttaatttta tttgttacta tatactcata
     8941 aaaaaaggag gtggttctta tgaaaaagaa tcttttgaaa aaaacgatcg tttgttttat
     9001 taacttgctt gttgtgttga tggcagttgc tccaccagca gtgtctgctc aagctgctag
     9061 tcgaatcgaa acacctgttg aaacaaaatc gaagcatttt tcgaatttag aaggtggtgg
     9121 agatttatcc tatattaacc tttctggtta ttcaaataga ttcggaacag cggcatctgg
     9181 tagatctggt acatatttcg gaccaagagg aacttatgtg actagagatt ggtctgttaa
     9241 ttctggagga ggatcacatg gaggaagtta ttggaagcta tttaatcgaa atggtcaacg
     9301 aataggtaca tatgacaagt atggaaatta cctacgtcca tagtaaataa actaggagaa
     9361 atatgcaaat tattcaatta aataattttg aaattaagat ttcagaaaga ttacactcta
     9421 tttatgatgg caaaaacaag atattagtta tctttccaga ccataccgca atctgctgtc
     9481 aggtaaaact ttctcaaaca ggcggattct tggtagatac attttggggt gtggaatatg
     9541 agatttcagg caacatggta actatctatt acacggatga ggaggaattg gaatgaaaca
     9601 gtatttattt agacagcata ctatccatgt tcatccaagt ttaaatgttt tcatcggaaa
     9661 tgatgaagca gaaatggttc tctatagcaa agaaccagat ttcacacttt tagccttgct
     9721 aagatggtta ccagataaaa attctattcg tattattaac cgttggaaat taacctatga
     9781 atacgacggt aacaataata tctacattca ttatgattcc gactatcgtt actaaaaata
     9841 agagttgagg ttctaatcta tagaaaaaac gcataaaatc aagttatcat cttggcttta
     9901 tgcgtttttc tatttcattg ttggcgagct ttaacctgcc agtttatctt atttagcaat
     9961 ccgttcttga taggcttctc gtgcttggtc aaatagttct tggacctgct cgatagtctc
    10021 tgctcgggca acggcgccac gaatcttggc agcacctgct gagccacgga gatagtgggg
    10081 agctaggcca cggaattcgc ggacggcaac tgactcgcct ttaagattgg tcaatcgggt
    10141 caggtggtcg aaggcgacat tgagtttgtc atcgaaggag aggtcgggga ggacttctcc
    10201 tgtttcaaga tagtggttga tttggttgaa gatgtaagga tttcccatag cagtccgtcc
    10261 gaccatgaca gcatcagcac cgacttcctc gattcgctgg cgggcatctt ggacattacg
    10321 gatgtcgccg tttgcgatga agggaatctt ggtcaggctg ccagctacct tggtcaaggt
    10381 ctctaggtca actgttcctg tgtacatctg ctcgcgggtc cgcccgtgca tggccagggc
    10441 agacacaccg gcactttctg cggccagggc attttcgacc gctaggtcgg tattgttcca
    10501 acccgtccgc atcttaactg tcaagggaat atcaaggacc gaggtcactt ccttgatgat
    10561 gtggtaaatc ttgtcggggt ccttgagcca cttagcacca gcttcgtttt taacgacctt
    10621 gttgacaggg cagcccatgt taatatctac gatattagct ttggtgttgg tttgaatgaa
    10681 gtcggcagcc cgtttcagtc cttcggcgtc gccaccaaaa agctggatgg acatagggta
    10741 ttcgttgtcg tcaatatgga gcatatggag ggtcttctcg ttgttgtaga gaaggccttt
    10801 ttcagaaatc atttccataa cgaccagacc tgcgcccatt tctttggcaa tggtacggaa
    10861 ggccgagttg gtcacgccag ccattggggc cagcacgcag cgattgggga tttctacatc
    10921 accaatcata aaaggggtat tgagattagc cattgatgag ttcctccaaa tcgttttcgt
    10981 caaagtggta atgggtctgg cagaattgac aggtgatgtc cacacctttg tcttcttcct
    11041 tcatctcttg caggtccgct tttggcaagc tggctagagc atcgaggaag cggtctttag
    11101 agcagtcgca gacaaagccg atttcttctt ctgacaggcg tttgaagtcg tcgtcgccat
    11161 aaatggcgga tagcagagct tctatgtggt tttcagaagc cagcaagctt gaaatggcag
    11221 gcatttcttg gatgcgtttt tcgaaacggg caatttcagc ctcagtcgca cctggtaaaa
    11281 cttgcagcaa gaatccgcca gctaccttga ccttgtcttc ttcatccaat aaaacattga
    11341 gccccaccgc agatggtgtc tgctggctgt ctgtcaagaa ataggcaaag tcttcaccga
    11401 tttcaccaga gattaagggg gtcatggaat tgtaaggatg ccctgttccg tagtctgtga
    11461 taaccaggaa ttgtccgttc cctacaagag gcccaacgat gacttcgcca gtcgctgttc
    11521 gtttgtagtc caagtctgga ttttgaatgt agcccttgac ctgacctttg gtattggcaa
    11581 cggagatgat agccccaata gcaccgctgg ccaagatttt cagggtgatc ttggtatcgc
    11641 ctttttcgtt ggcagccaaa atctgattgg caatgagagt gcgacccaga gcaacggttg
    11701 atgaagccat ggtgtcgtgt ttttcttggg ctgttttcac ggtttctgtg ctatccagca
    11761 cgaaggcacg gaaatgcccg ctttttgata gtgttttaat aattttatcc ataactttaa
    11821 ttatagcaca agtggaggtg aagcagtaga aaaatgagcc tgaaagtcat gctttcaagc
    11881 tcaaaaaatg attaggattc tttttgtttt ttgacaaggc aggcgctcaa gattacgaga
    11941 ccgattgtga taagtacaaa gcttgtttct cctcctgtct ttggaaggat tttcttttga
    12001 ctgttgttgg cagtaggggt cacggttgtt tgtcccttgt ctgtagcgcc agaacggtca
    12061 tcagtattta cagctgtttg attagaagtt gaaagatttg ttggcttgtt attgttggtc
    12121 gtaccattgt catcactatt attgactgtt cctgagtcat ctgtctgctt gtcgcttggt
    12181 tctggttgag ttggttcttg tgcctttgtc acatccagtt gtaccaatag tggatcgtgg
    12241 tcagaagctc tgccatgttc ttccataaag gctgaattga catggaccat atcaaaggca
    12301 tagcgctcca acaagttagt tgatactagc atattgtcaa gagactgatt gtttccgtta
    12361 tagaagtaag agaagcgatc ggatgcatcg tgacgactaa cgaggttagc cattcctcct
    12421 gtttctaaaa tttctatggt tttagtaaat tcatagtcat tgaagtcgcc tagcataacg
    12481 atattagcat ttggattttg agctaagcct gcttttgtaa agtcagcgat aatttgtgct
    12541 agtatgtggc gtttttcttc ggacttgaag ctgacaggtt ggatttttcc gtagagacca
    12601 ttgtcaccgc gttttgagtt gagatggttg gcaaggacaa cgactttctc gcctttgaag
    12661 atgaattcag ctgcaagtgt tttgcggaca gctgcccaag cagggttggt tgggtcgatt
    12721 cggcccaggc tgagattgag ttcgccgttt tcccatgcaa ttgcctgtgt tgcggtaccg
    12781 cttggtttgt cagataggct gacacgtttt gagttgtaga ggaagccgac gcgaatattg
    12841 cctccctctt gtccgccgtc tttgttgttt tcaggagcaa tatccacata ggtatagatt
    12901 ggtccgccgg ctgcttgaat ggctgcaatc aggcgctcag cactcttact agcatcagtt
    12961 gtgccgtcat ttgtagcacc gttgttgtcc tgcacttcaa tcaatccgat aatatctgga
    13021 gaatgtaggt ctgaaacaaa ggatttggca atacgttgga ctttagcgtc tgatgttgac
    13081 ttactgtcag cagaaaagtt ttcaatgtta taagaagcga tagtcagctt gtcatcattt
    13141 gggacaatgg ttgtagtttc tggttttgta gctccttcgt gcaaggttgg aagggtgcta
    13201 tcatctacat agactttata attggtgtaa gagtaggtaa ctggtccagc gatacgaccg
    13261 gtgaaatagt ctcctgattt gacgatctgt tttccatttt tcaaaagtag agggatgata
    13321 ttggtattat tcccttcagg gcgaaggttg acgcctccaa cattatttaa aggaagttga
    13381 ctagtggcag gagtgacata tatttccttg ttttttagtg gaccaaggat ttttgcatca
    13441 tccacggcaa ccaccatgcc ttcaacggat tcccagaaat cgagcgcatc ttgttctgga
    13501 tcaaattgag ccaaaccgtc gttgtcaata atatctgctg ggatggtccg atcaagacca
    13561 aggactatag gagatggtac aggtgcagtc ccatccacag ttacttcagt agctcgaatt
    13621 tgtgtgatgg ttaagtctgt tttcccacgt tctgtataac cttttccgag gtattcttct
    13681 acacgtcctg cgatagtgac aagatctcct accttgacat tggtttttaa tttgtcagta
    13741 aaaatattaa taccgtcaga tgttttgacg tctccatctg gtgtgacatc ttgcacgtag
    13801 aagttattgg cagaggtaac gtaggttact acgacgtttt taagaatcac agattgattg
    13861 gttagaggtg attggtgact tgcaccttga atgtgaccga ctgttacagt ttcggtcttg
    13921 cctggtgctg tctctgttgt tgccttttca acgacttcaa aatgagagag gtcaaatggt
    13981 tttaattgta tttttccatt ataggtggat aaaatagcgg ttagattaat cttatctccc
    14041 ttgttgatat ggttcaaaag atcagccgtt ttgatacctg ttcgactatc taaacgcaca
    14101 tccacagttt gtccttcgga atcagttacg gtaaaggtag aattttgata gctatcgctt
    14161 tgaatatctc cgacagtcaa gttttttaga gaaactagtg ttgcctgtgc ttgcgttgct
    14221 aactgagcga tgtttgtttc tgtaatggga gcgttgaaat gctcagatat agccttgtgg
    14281 ttgctaactg tggttagttg gagttcgcct ttatactcac ccaatgttcc tgttaattga
    14341 acggtatcac caggctgata gcccaaggca gccccagggt agatatagat accagcaccg
    14401 tcagaatctt ggaggtaaaa gccatttcct ccccaaccgt ttactaggct aataatttta
    14461 ccagaaacgg tgtactctgt tccttgtgca ccagagcgaa cagtagcaat cggtgtagaa
    14521 acaaggtcac ttgactcggt agtcgtattt tcacttgttg gtggctgaac attagtagaa
    14581 gatgaatcta cgatttcaat cgctgtagct ggtttgattc cagctcgctt catgtatgta
    14641 tcgctagttc ctgtgatgcg aaccaatttt ccgactagtt cgggatgatc aacgaggttg
    14701 aattggctgc gaagaggttc ttttagttga atagggatag tgtcggcggc cgcagtatcc
    14761 atgcttgcac caagggctag atttgttttg ttagtggcgt caaaagcagt tccgctacta
    14821 ttaagtggtg caataagata accttgtatc gtgacttccg acttggttat tgcaagtgac
    14881 ggataattct ctatcgccac ttcagtagcg tgcacagatg gtatgggcga agtagcaaga
    14941 ctaagcaaga gtccggctgt taccgctaca gaacctacgg tatagaagag agaatggttt
    15001 ctaatcttca tataaaactc ctttttatta tatatggacg ttatcaaaac gtctgcagtt
    15061 gttatatata tatagtttaa caaaaaatga gtcgtttgga atactttttt agatataata
    15121 cggatatttt taaaaattca aatgaaatag caaaaataca ttagaaaaca aaacaaaaaa
    15181 cgaacaatag agtggaatgc tgggaattag ttcataaaaa gcaccgagat ataaatgatt
    15241 atcttggtgc catattcatt ttatttaaca ttag
//
LOCUS       DASFQD010000054        15081 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.054, whole genome shotgun sequence.
ACCESSION   DASFQD010000054 DASFQD010000000
VERSION     DASFQD010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 15081)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15081)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15081
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.054"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            151..1413
                     /gene="purD"
                     /locus_tag="U1021_001270"
     CDS             151..1413
                     /gene="purD"
                     /locus_tag="U1021_001270"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009660198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEM4711811.1"
                     /translation="MKLLVVGSGGREHAIAKKLLESEQVEQVFVAPGNDGMTLDGIKL
                     VNIGISEHSALINFAKENDVAWTFVGPDDALAAGIVDDFEQAGLKAFGPSRLAAELEW
                     SKDFAKQIMVKYGIPTAAFGTFSNFEEAKAYIEEQGAPIVVKADGLALGKGVVVAETV
                     EQAVEAAREMLLDNKFGDSGARVVIEEFLAGEEFSLFALVNGDQFYILPTAQDHKRVF
                     DGDQGPNTGGMGAYAPVPHLPQNVVDTAVDTIVKPILEGMIAEGRSYLGVLYAGLILT
                     EQGPKVIEFNARFGDPETQIILPRLTSDFAQNIDDILYKRPTQLTWLDSGVTLGVVVA
                     SNGYPLDYEKGVELPAKTEGDITTYYAGARFADNSRALLSNGGRVYMLVTTADTVQEA
                     QEKIYSELKNQDTTGLFYRTDIGSKAVK"
     gene            1439..1927
                     /gene="purE"
                     /locus_tag="U1021_001271"
     CDS             1439..1927
                     /gene="purE"
                     /locus_tag="U1021_001271"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEM4711812.1"
                     /translation="MNIPISIIMGSSSDWKTMKKAADVLDKFGVAYEKKVVSAHRTPD
                     LMFRHAEEARERGIKVIIAGAGGAAHLPGMVAAKTTLPVIGVPVQSRALSGVDSLYSI
                     VQMPGGVPVATMAIGEAGATNAALTALRILSIEDQTIADQLAAFAKEQEKIAEAMTDD
                     LI"
     gene            1914..2999
                     /gene="purK"
                     /locus_tag="U1021_001272"
     CDS             1914..2999
                     /gene="purK"
                     /locus_tag="U1021_001272"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEM4711813.1"
                     /translation="MTSSKTIGIIGGGQLGQMMAISAIYMGHKVITLDPAADCPASKV
                     SEVIVAPYHDVAALKQLAERCDVLTYEFENVDADGLDAVIKDGQLPQGTDLLRISQNR
                     IFEKDFLAKKAGVQVAPYKVVTSSLDLEGLDLSKNYVLKTATGGYDGHGQKVIREAAD
                     LEAASQLANSTECVLEEFVNFDLEISVLVSGNGSDYTVFPVQENIHRNNILYKTIVPA
                     RISDELAEKAKTMALQIADKLHLAGTLCVEMFVAGQEILVNEIAPRPHNSGHYSIEAC
                     DFSQFDTHIRGILGEPLPPIRLLSPAVMINVLGQDMEAVQTFLQENPTAHAHFYGKLE
                     AKHNRKMGHVTVLTEDVEVGFRQDEIR"
     gene            2986..3909
                     /locus_tag="U1021_001273"
     CDS             2986..3909
                     /locus_tag="U1021_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4268 domain-containing protein"
                     /protein_id="HEM4711814.1"
                     /translation="MKLDRLKEVDVREIWKHEQYDFSEWLSRTENIELLSDEIGLTLT
                     EIDKEVFVGSYRCDLVAIDETTGIKVIIENQLELTDHDHLGKIITYASGLDAEVVIWI
                     VKKAREEHRSAIEWLNNNTTKNISFFLIEIHAYQIGSSMPAPKFVLVEKPNDFTKLAK
                     GNNHGGDLSKAQAERLYFWTQFNNVVATKNKPFNVRKATTDHWYDVAIGTSEAHISIT
                     LVNKSKSVGIEIYINNNKELFDKLSSHADEIHEELGFEMEWKRLDNRKVSRIIYYIKG
                     LDFENHDNYNDLIDEVINKVIILRDVVKKYI"
     gene            3944..5236
                     /gene="purB"
                     /locus_tag="U1021_001274"
     CDS             3944..5236
                     /gene="purB"
                     /locus_tag="U1021_001274"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEM4711815.1"
                     /translation="MIERYTRPEMGNIWSEENKYKAWLEVEILADEAWAELGEIPKED
                     VALIREKATFDIDRILEIEEETRHDVVAFTRAVSESLGEERKWVHYGLTSTDVVDTAY
                     GYLYKQANDIIRRDLENFTNIIADKAREHKYTIMMGRTHGVHAEPTTFGLKLATWYSE
                     MKRNMERFDVAAKGVEAGKISGAVGNFANIPPFVEEYVCGKLGIRPQEISTQVLPRDL
                     HAEYFSALALIATSIERMATEIRGLQKSEQREVEEYFAKGQKGSSAMPHKRNPIGSEN
                     MTGLARVVRGHLVTAFENVALWHERDISHSSAERIITPDTTILINYMLNRFGNIVKNL
                     TVFPENMKRNMESTFGLIYSQRVMLSLIEKGMTREEAYDLVQPKTAQSWDNQVDFKPL
                     LEADERVTAKLSQEEIDELFNPDYYAKRVDDIFERLGL"
     gene            5745..6569
                     /locus_tag="U1021_001275"
     CDS             5745..6569
                     /locus_tag="U1021_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000621675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711816.1"
                     /translation="MITVQHIHKQFGDKVALDNISFDIQEGQIFGFLGPSGSGKTTMI
                     KIITGQLPADSGKSYLLGKESTLLSPEDFEAMGLVSDSSGFFEKMTLENNLLFYAKFF
                     DVSPKEVEVILQKVGLLDSKKTIAEKLSTGMKQRMLLARALINSPKVLFLDEPTSGLD
                     PTTSKRIHELLLELKGKGTTIFLTTHDMAEATFLCDQLVLLNQGNLVEKGSPQDLIHK
                     YNVTKKVRVTFEDGSDTELLFSELTPEKLAQATTIHSCEPTLEDIFIQQTGATLNV"
     gene            6562..7296
                     /locus_tag="U1021_001276"
     CDS             6562..7296
                     /locus_tag="U1021_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4711817.1"
                     /translation="MYKRFLALLWLRTQVLVTNKNILLPVLMPYFMLLLFKFVMKTDD
                     TKAMDLMGICFSMAIGMSVGSPISAMISEEKEKNNLSTLLLTGVRPSEYVLSILCYPV
                     VISFVNLILFPAITQADVSGYMLSYSVIMLLTSLASILINLLIGATSQSQSKSQVTSM
                     MITMAVSMGPSLSLMNETVGQILKYSFLGAYIEFFKNPHFELLNQEFYYLLGWIVLIS
                     LALILYLGNWMKYFKNSLSGIKEKIQ"
     gene            7631..8359
                     /locus_tag="U1021_001277"
     CDS             7631..8359
                     /locus_tag="U1021_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HEM4711818.1"
                     /translation="MNMFWSIFKSVIHRRDVALFYAFAGLPILVPILSKFLVGVKAEY
                     TDNFLDFLGAALATQDGIVLPILLLSLIISAVFRDEIDSGILFLYKDLNRTRLFNAKI
                     ISLVTMYASYVLLTMLTSAIAYFGFLNASGKVVSDDWNNVQSTFLSIFATISINVIGI
                     LLVAMVSIKAKSLQAVLAGVFWSLFTTTAPFLIGVRYVVPNGYAQMSFNQPLLAWSLV
                     AAITTLYIVATYLKGRSNFEKLEF"
     gene            8369..8947
                     /locus_tag="U1021_001278"
     CDS             8369..8947
                     /locus_tag="U1021_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4711819.1"
                     /translation="MVIRYIRPVALSIALIILASISYLLATSLVLFSPSQFLQVAYLF
                     SIMVGMPVGFILFPSMLTKRYQLCQELSEVKFSWKSFVLLAIAIFLINFWCIQSDEYV
                     NQFIIATCEEFLFRYLIYRILKSEYPTWLAMLVTSLLFGVLLHMNYPLLDNLIIRTPL
                     GLLFSVLATRFGLQYAIGGHWIYNLLVSRFPF"
     gene            8962..9390
                     /locus_tag="U1021_001279"
     CDS             8962..9390
                     /locus_tag="U1021_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711820.1"
                     /translation="MIFILLLSLLYTCLTVVSSQLLLSLSVPILLLLTYLLPPIVNSI
                     CLGLLKDNSWKAWSAGIFPTMSMIFYAAFAYITSSNGQWAQFSQLNTVSDDVMSVEVA
                     SNLLAPSQILFVAVVYYGVAIATYFIQQTSRQKEKGVTYA"
     gene            9383..10255
                     /locus_tag="U1021_001280"
     CDS             9383..10255
                     /locus_tag="U1021_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711821.1"
                     /translation="MLKINHLSKQFAGNEFYSLKDVSLEINKGEIVGLIGKNGAGKST
                     LMKLIAKSLKPSSGTITYKGTDIFSQDNLLADFGIMIDPVFYPEMTVMDNLKFYLDLH
                     GKKDLYPNIEKTLKLVELWEARNRKPKGFSFGMKQRTALAIALVAEPDFLILDEPFVG
                     LDPIGVQKLIDILKQWSSERQISMLISSHQLGELEALCSRYVYIESGELAEAFEGKSH
                     PSVLVQLNTTKNLDSVEALLNDHVVLEGEVLEISTATPTSELNQIFGVLARQELIVKL
                     EVKENHLKEIFTKG"
     gene            10261..11031
                     /locus_tag="U1021_001281"
     CDS             10261..11031
                     /locus_tag="U1021_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711822.1"
                     /translation="MKQIFPAIFKTIWKRKETQIYLLFTLFPFIYLVTSFIEGSNFMQ
                     IHASEGSVSLVAFTNMMMSSVDSFILPSLTLYFLAISVFRKEVDEHTMFLYRDLGRKQ
                     IFWSKYLGLLATIVIFYGLFFATSAFVHYVRVIHLPFGSPSVFDTSLAESLSNVFCIV
                     AYLLKDILSVSLATALCLYLKNITTMIIGFLVTITMMILAVVGGPVAMIFPTSYMPLA
                     SEGLTGVGLAYLGAIGVTLVYALVFTKIAAKKFKNLEF"
     gene            11034..12746
                     /locus_tag="U1021_001282"
     CDS             11034..12746
                     /locus_tag="U1021_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711823.1"
                     /translation="MNRRLVGVLLKSLNKTMFLFGIALSALGVGMGLFLPQFIGQLLD
                     QTYLSNLLTRPELLAGFILFFVSVYTVQALSNYFIGRSGGNALKQLQQYIYESLLTTY
                     VKDLDQYQSGDLASRLTNDMSVVLNFITVILPNFLMNGLMVIGSIYFLWTISPWLTGL
                     SLLLLPMLSMVMIPMNQRLEGYYSAYQEGLGQVSSRISHKFTTIRLMKAFQGEKHEQR
                     EMGKSFQKLSQTFERMIRLSAVQHTLVSSLMTGFIILMLLVAGIEVTKGVMTMATLTT
                     FVLYMMQLIDPVTDIASSLNELTEFQAVSKRLVELLELTKEEQADTELVDEASIQLEN
                     VRFSYHTDPVLNGVSVRIPEGAHVAIVGPSGAGKSTIFALLMKYYQDYQGEIRIGQQC
                     LSDISTKEMRRLISFIPQDNTLFHGTIRENLLYGKNESVSEERIAHILKELGLSHLVA
                     ELEDGLDTRISENGTGLSEGQKQRFSIARALLLEHPIYLLDEATASLDTVTERVISKA
                     IDRLTAGKTRLTIAHRLHTVREADAILVLDKNGQVADYGPHQQLVERNHLYQDFLRGL
                     PQAS"
     gene            12848..13060
                     /locus_tag="U1021_001283"
     CDS             12848..13060
                     /locus_tag="U1021_001283"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711824.1"
                     /translation="MKQTTYTLSLGGNDSGDSKVSKMEKSLKNIWRGSQSGYGVLGRG
                     VLINGLSVCGLRSKVAMTKIHRRFYK"
     gene            13315..14316
                     /gene="ruvB"
                     /locus_tag="U1021_001284"
     CDS             13315..14316
                     /gene="ruvB"
                     /locus_tag="U1021_001284"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEM4711825.1"
                     /translation="MTNRILDMEQMQDEEYVERTLRPQKLNEYIGQDKVKDQLKIFIE
                     AAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVNIKQTSGPVIEKAGDLVALLNDL
                     EPGDVLFIDEIHRMPMAVEEILYSAMEDFYIDIMIGAGEASRSVHLELPPFTLIGATT
                     RAGMLSNPLRARFGITGHMEYYELADLTEIVERTADIFDMEITHEAAIELARRSRGTP
                     RIANRLLKRVRDFAQIMGDGLIDDNITDKALTMLDVDREGLDYVDQKILRTMIEMYGG
                     GPVGLNTLSVNIAEERETVEDMYEPYLIQQGFLMRTRTGRVATAKAYEHLGYPYTEK"
     gene            14384..15007
                     /locus_tag="U1021_001285"
     CDS             14384..15007
                     /locus_tag="U1021_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEM4711826.1"
                     /translation="MTPTFIWDLDGTLLDSYEAILAGIQETYEQFGLPFDREEVRNFI
                     LRYSVKDLLVRDADKYGLDSHELNRVRATSLKEKNTQIPLMSGAREILDWTAEKGIQN
                     FVYTHKSDNAFQVLEDLGVRQHFTEILTSDSGFARKPSPEALLFLIEKYGLNKENTYY
                     IGDRLLDVETAINAGIQSINLQIDGVEQNWKIVSLLDIKQMLTDEYK"
BASE COUNT         4258 a         2844 c         3553 g         4426 t
ORIGIN      
        1 agaaatatgt accgcctaac gaaggtgaag ccatcatggc tgtcttgccc agcctctttt
       61 ccattcccga acgttcttct gttcgtccta tcaaaatccg tctgtttttg ctatactgtt
      121 tatataaaat ccgtttttga ggtgtaagaa atgaaacttt tggtcgttgg atctggtggt
      181 cgtgaacatg ctattgcaaa gaaattgtta gagtctgagc aggtagaaca ggtctttgtt
      241 gctcctggaa atgacggaat gaccttggat ggtatcaagt tagtcaatat cgggatttcc
      301 gaacattctg ccctgatcaa ctttgctaag gaaaatgacg tagcttggac ttttgtgggt
      361 ccagatgatg ctctggcagc aggtatcgtt gatgattttg aacaggcggg actaaaagct
      421 tttggcccga gtcgtctagc cgcggagctg gagtggtcaa aagattttgc caaacaaatc
      481 atggtcaaat acggcattcc aactgcagcc tttggcacat tttccaactt cgaagaagcc
      541 aaggcctaca tcgaagagca gggggctcca atcgtggtta aggcggacgg cctggcactg
      601 ggcaagggtg tagtcgtggc ggaaaccgtc gagcaggcag tcgaagcggc tcgggagatg
      661 ctcttggaca ataagttcgg cgactcgggt gcccgtgtgg tcatcgaaga gttcttggcg
      721 ggcgaggagt tttccctctt tgctctggtc aatggcgacc agttctatat tctgccgaca
      781 gcccaggacc acaagcgtgt ctttgacggc gaccagggtc ctaacacagg cggtatgggg
      841 gcttacgctc ctgttcccca cctacctcaa aacgtggtgg acacagcggt tgacaccatt
      901 gtcaagccta ttcttgaggg catgattgcg gaagggcggt cttatctggg cgtgctctat
      961 gctggtttga ttctgacaga gcaaggtccc aaggtcatcg agttcaacgc ccgttttggc
     1021 gacccagaaa cccagattat cctgcctcgt ctgacctccg actttgctca gaacatcgat
     1081 gacattctct acaaacgccc gacacagctg acttggctgg atagtggcgt gacgctgggc
     1141 gtagtcgtgg catcaaacgg ctaccctctg gattacgaaa aaggtgtaga gttaccagcg
     1201 aagaccgagg gcgacatcac gacctactat gcaggggctc gttttgcgga caatagcaga
     1261 gcactgctct caaacggcgg tcgggtttat atgctggtca ccacagcaga caccgtccaa
     1321 gaagcccaag aaaaaattta ctcggagctg aaaaatcaag atacgacagg cctcttttat
     1381 cggacagata ttggaagtaa ggcagtgaaa taagggacaa agaaaaggaa agacaagtat
     1441 gaatattcca atttccatca tcatgggttc tagttctgac tggaaaacca tgaaaaaagc
     1501 agccgatgtg ctggacaaat ttggcgtagc ctatgaaaag aaagtggtct ctgcccaccg
     1561 cacaccagac ctcatgttcc gtcacgccga agaagcacgt gagcgtggca tcaaggtcat
     1621 tatcgcagga gcgggcggtg cggctcattt gccaggtatg gtagcagcca agactaccct
     1681 gcctgtcatc ggtgttccag tccaatctcg tgcccttagc ggtgtggatt cgctttattc
     1741 tatcgtgcaa atgccaggcg gtgtgcctgt tgcgactatg gcgattggcg aagctggtgc
     1801 cacaaacgca gccctgacag ctcttcgcat tctctccatt gaagaccaaa ccattgcgga
     1861 tcagctggca gcctttgcca aggaacagga aaaaattgcg gaggcgatga cagatgacct
     1921 catctaagac aatcggaatt atcggcggcg gtcagctagg tcagatgatg gctatttccg
     1981 ctatttacat gggccacaag gtgatcacgc tggatcctgc ggcggactgc ccggcctcca
     2041 aggtcagcga ggtcatcgtc gctccctatc acgatgtggc ggccctcaaa cagctggcgg
     2101 agcggtgcga tgtcctgacc tacgagtttg aaaatgtcga tgccgacgga ctggacgcgg
     2161 tcatcaagga cggccagctt cctcagggga cagacctcct ccgcatttcc cagaaccgca
     2221 tttttgagaa ggattttttg gcaaaaaaag ctggcgtgca agtcgccccc tacaaagttg
     2281 tcacatctag cctagaccta gaaggtctgg acctcagcaa aaactacgtt ttgaagacag
     2341 ctactggggg ctatgatgga catggtcaga aggtcattcg agaagccgcg gacttggagg
     2401 cggctagtca gttagccaac tctaccgagt gtgttttgga agagtttgtg aatttcgacc
     2461 tggaaatctc cgtccttgtg tctggcaatg gctccgacta caccgtcttt cctgtgcagg
     2521 aaaatatcca ccgcaataat attctttaca agaccattgt gcctgctcgt atttctgatg
     2581 aacttgctga aaaagccaaa actatggccc tgcaaatcgc agacaaactc catttggcag
     2641 gcaccctctg tgttgagatg tttgtggcag ggcaagaaat tcttgtgaat gaaatcgctc
     2701 ctcgcccgca caattcagga cattattcga ttgaagcctg tgatttttca cagtttgaca
     2761 cccatatccg aggcatttta ggggagcccc tgccccctat ccgcctgctt tctccagctg
     2821 ttatgatcaa tgtcctcgga caagacatgg aagcagtcca aacctttctt caagaaaacc
     2881 ctaccgctca tgcccacttt tatggtaaac tagaagcaaa gcacaatcgc aaaatgggac
     2941 acgtgacggt gttgacggaa gacgttgagg tgggatttag acaagatgaa attagatagg
     3001 ctaaaggaag tagatgttag agaaatctgg aaacatgagc agtatgattt ctcggagtgg
     3061 ctgtctagga cagagaatat cgaattactg agcgatgaga taggactgac tcttaccgag
     3121 attgacaagg aagttttcgt tggctcatat agatgcgatt tagtggctat tgatgaaaca
     3181 acgggaataa aagtgattat agaaaaccaa ttagaattaa cggatcatga tcatcttggt
     3241 aaaatcataa cctacgcatc gggcttagat gctgaggttg tcatttggat tgtaaaaaaa
     3301 gctagagaag agcataggag tgctatcgag tggcttaaca ataatacaac gaaaaatata
     3361 tcttttttcc taattgaaat ccatgcttat caaataggta gttcaatgcc tgctcctaaa
     3421 tttgttcttg ttgagaaacc gaatgatttt acaaagctag ctaaaggaaa taatcacggt
     3481 ggtgatttga gtaaagcaca ggcggaacgt ttgtattttt ggactcaatt taataatgta
     3541 gtggcaacta aaaataaacc gttcaacgtt agaaaagcta ctacagacca ctggtatgat
     3601 gttgctattg gaacaagtga ggctcatatt tctattaccc tagtcaataa atcaaaaagt
     3661 gtagggattg aaatctatat aaacaataat aaggaattat ttgataagct atcatcacat
     3721 gctgatgaaa tccacgaaga acttggattt gaaatggaat ggaagaggtt agataataga
     3781 aaggtttcca ggattatata ttatataaag ggtctggatt ttgagaacca tgacaattac
     3841 aacgatttaa ttgacgaagt aattaacaaa gttatcattt tgagagatgt agttaaaaag
     3901 tatatctaaa aaaataaata gatagggaaa aaggaaacac aacatgatag aacgctacac
     3961 acgccctgaa atgggcaata tttggagtga agagaacaag tacaaggctt ggttggaggt
     4021 ggaaatcctc gctgatgagg cttgggctga gttgggtgag attcccaaag aagatgtggc
     4081 cttgattcgt gagaaggcga cttttgacat cgaccgcatt ttagagattg aagaggaaac
     4141 ccgtcacgat gtggtggctt ttacgcgtgc ggtttcggaa agtcttggtg aggaacgcaa
     4201 gtgggtccac tacggtctga cttcgaccga cgtggtggat acggcttacg gctacctcta
     4261 taagcaggcc aacgacatca tccgtcgtga ccttgaaaac tttaccaaca ttatcgccga
     4321 caaggcgcgt gagcacaagt acaccattat gatgggccgg acccacggtg tccatgcgga
     4381 gccaacgacc tttggtctga agctcgcaac ttggtacagc gaaatgaaac gcaacatgga
     4441 gcgttttgat gtggcggcca agggtgttga agctggtaaa atttcaggtg cggttggaaa
     4501 ctttgctaac attcctccat ttgtggaaga gtatgtttgt ggcaaattgg gcattcgtcc
     4561 gcaggaaatt tctacccagg tccttcctcg tgacctccac gcagaatatt tctcagccct
     4621 agccttgatt gcaacatcta tcgagcgtat ggcgacagaa atccgtgggc tacaaaaatc
     4681 tgaacaacgc gaagtcgaag agtatttcgc caaaggccaa aaaggcagct ctgctatgcc
     4741 ccataaacgc aaccctatcg gctctgaaaa tatgaccggt ctggctcgtg tggtgcgtgg
     4801 tcacttggtg acggcttttg agaatgtggc tctctggcac gaacgcgata tttcccactc
     4861 gtcagcggag cggattatca cgccggatac gactatcctc atcaattata tgctcaaccg
     4921 ttttggcaat atcgttaaga acttgacggt cttccctgaa aatatgaaac gcaatatgga
     4981 gtcaaccttt ggcttgattt acagccagcg tgtcatgctc agtttgattg aaaaaggcat
     5041 gacccgtgag gaagcctatg atttggtgca accaaaaact gcgcagtcat gggataatca
     5101 agtggacttc aagccccttc tcgaagcgga tgagcgtgtg actgccaaac ttagccagga
     5161 agaaatcgat gaactcttca acccagacta ctatgctaag cgggttgatg acatctttga
     5221 acgacttgga ttataaaaaa tcaaaattct ttggattttc cagagaattt ttttatttac
     5281 ttgcgaataa ataggtgaag gggaaaacaa gctccctccg ctagacaatc attcgtgagt
     5341 aaaaataaac cattttttac aaaagtttac gaatagataa gtgtggggga agcctgctca
     5401 caacttattc aaaacaagta tcgtcattta gtttttcttt tattacttcg ttaactcgcc
     5461 ttgcctaact ctagttatgc ctgcggctcg ttgtctagta ctaaaagtaa actaaaagac
     5521 tataaaaatt ttttcaaaaa aaacaacgat ttgcgaataa gtaagtgaga gggaaaattc
     5581 ccctcaagga gatacacact tgaaaaaata aatcattttc caaatgattt acgaataaac
     5641 aagtgtagga aaaatgaaag gagaagaagg atgattatag caccagcttt atggatttta
     5701 tcatggtgga aaaaataagt ttgttttaat ttaggggagt agagatgata acagttcaac
     5761 atatccataa acagtttgga gacaaggttg ctttagacaa cattagcttt gatattcaag
     5821 aaggacaaat ctttggcttc ttgggtccct ctggatcggg aaagacaacc atgattaaga
     5881 ttattaccgg ccagctacca gcagatagcg gaaaatccta tctactaggt aaagaatcga
     5941 ccctattgtc accagaggac tttgaagcaa tgggcttggt cagtgattcg agtggtttct
     6001 tcgagaagat gaccttggaa aataatttgt tgttctatgc aaaattcttt gatgtcagtc
     6061 cgaaagaagt agaggttatt ctgcaaaaag tagggttact ggatagtaaa aagacaattg
     6121 cagaaaaact atctacaggt atgaaacagc gaatgttgct tgccagagcc ctgatcaatt
     6181 caccaaaagt attgtttctt gatgagccga caagtggtct agatccaaca acttcaaaac
     6241 ggattcatga actattattg gagctaaaag gtaaggggac gacgatcttc ttgaccacgc
     6301 atgatatggc agaagcgaca ttcttatgtg atcaattggt tctattgaat caaggaaatt
     6361 tggttgaaaa gggaagtccg caggatttaa ttcataagta caatgtcact aaaaaagtga
     6421 gggttacttt tgaggatggt agtgatactg agctgttgtt tagtgagttg acacctgaga
     6481 agttagctca ggcaaccact attcactctt gtgagccgac tttggaagac atttttattc
     6541 aacagacagg agcaacctta aatgtataaa cgatttttag ccttgctttg gcttcgcaca
     6601 caagtcttgg tgaccaataa aaacatccta ttgccagtat tgatgcctta cttcatgtta
     6661 ttgctgttta agtttgtcat gaaaacagat gataccaagg caatggattt gatgggaatt
     6721 tgtttttcaa tggctattgg tatgtcagta ggaagtccta tatctgcaat gatttctgaa
     6781 gaaaaggaaa agaataatct gtctaccttg ttactgacag gtgttcgccc aagtgaatat
     6841 gtgctgtcta ttttgtgtta tcctgttgtc attagctttg tcaacctcat tctatttcca
     6901 gctatcacac aggccgatgt atcaggatac atgcttagct actcagtcat catgctcttg
     6961 acatcattgg cttctattct aatcaacctt ttaatcgggg caacttccca atctcaatcc
     7021 aagtcacagg tgacctcgat gatgatcaca atggcagtat ctatgggacc tagcctgtct
     7081 ttgatgaatg agacagtggg gcagattttg aaatatagtt ttctaggagc ttatattgaa
     7141 tttttcaaaa atccccattt tgaacttttg aatcaagaat tctattacct attggggtgg
     7201 attgtcctga ttagtttggc cttgattctc tacttgggaa attggatgaa atattttaag
     7261 aactccctat caggaataaa agaaaaaatc caatagtctt tataatatga gtaaattaga
     7321 aaggagaaat ttatggtatc agcattcatt atcggtgtcg gtgtaggaat tattgtttat
     7381 tgtattcaaa actaatagga aattgaagaa agagtattat attatgaagg aggagaaaca
     7441 catgctagta gctgcagtta caggtttcgt tgttggttat gtggcggcac attatttgag
     7501 accataattg atggtgaaat atgagtatta aaattctttg gtttttccag agaatttttc
     7561 tttttgttta cgaataaata agtgagggag ttattgctca tctatcttat tgataaaaag
     7621 gggaaacaat atgaatatgt tttggtcaat ttttaaatcg gtaatacatc gaagggatgt
     7681 tgctttgttc tatgcttttg ctggtttacc aatcttagtt cctatactgt ccaaattttt
     7741 ggtaggcgta aaggctgaat atacggataa ttttttagat tttctaggag cagcattggc
     7801 aacacaggat gggattgtgt taccaatatt gttgttatcc ttgataattt ccgcagtttt
     7861 tagggatgag attgatagcg gtattctatt tttatataaa gatctgaata gaactcgact
     7921 ttttaatgca aaaatcatta gtttagtgac gatgtatgcc tcttatgtcc ttctaacaat
     7981 gctgacaagt gcgattgctt attttggctt cttgaatgct tctggaaaag tagtatcgga
     8041 tgattggaat aatgtacagt ccaccttcct atctattttt gcaacaattt caatcaatgt
     8101 tatcggtatt ctattggttg ccatggtttc tatcaaagct aaatccttac aggcagtttt
     8161 agcaggagtt ttttggtcgc tgtttacaac aactgcacca tttctcattg gagttcgtta
     8221 tgtcgtaccg aatggctatg ctcagatgag ctttaatcag ccactgcttg catggtcctt
     8281 ggtagcagct ataacaacat tatatattgt tgctacctat ctcaaaggcc gttcgaactt
     8341 tgaaaagcta gaattttaga ggtgttttat ggtaatacgc tatattagac cagttgcctt
     8401 atcaattgct ttgattattt tagcgtcaat ttcatatctt ctggcaacat ctttggtttt
     8461 gtttagtccc agtcaatttt tacaggtggc ttacctattt tccattatgg tcggaatgcc
     8521 agtaggtttt attctatttc catctatgtt aaccaagcgt tatcaacttt gccaggagct
     8581 atcggaagta aagttcagtt ggaaaagttt tgttttgctg gctattgcaa ttttcctgat
     8641 caatttctgg tgtattcaaa gtgatgagta tgtcaatcaa tttattattg cgacttgtga
     8701 agaattcttg ttccgttatc ttatctaccg tattctgaaa agtgaatacc ctacttggct
     8761 agctatgttg gtcacttctc tcttgtttgg agttttgcta catatgaatt atccattgtt
     8821 ggataatcta atcattcgaa ctccactagg tttattgttc tctgtgttag ctacacgttt
     8881 tggattgcag tatgctatcg gaggacattg gatctacaat ctgttggttt cgagatttcc
     8941 attttaattg tgagggttat gatgatattt attctactat tgagtttatt gtatacttgt
     9001 ttgacagttg taagttcgca actgctgtta agcctttcgg ttcctatttt gttattgttg
     9061 acctatttgc taccacccat tgtcaattca atctgtttag gattgctaaa ggataattct
     9121 tggaaagcat ggtcagcagg catttttcca acaatgtcaa tgatatttta tgctgctttt
     9181 gcctacatta cgagtagtaa tggtcagtgg gctcagtttt ctcaactgaa tacagtttca
     9241 gacgatgtca tgagtgtcga ggtagctagt aatctgttag ctccatcaca aatactattt
     9301 gttgctgtag tgtattatgg tgtagctatt gctacatact ttattcaaca aacaagtcgt
     9361 cagaaagaaa aaggagttac ttatgcttaa aatcaatcat ttatcaaaac agtttgcagg
     9421 aaacgaattt tactcactaa aagatgtgag tttagagatc aataagggcg agattgttgg
     9481 gctgattggg aaaaacggag ctggaaaatc cacgctcatg aaattaatag ccaagtccct
     9541 aaaaccaagt tcaggaacca ttacttataa ggggacggat atttttagtc aggataattt
     9601 gttggcagat tttgggatta tgattgatcc cgtcttctat ccagaaatga cagttatgga
     9661 caatcttaag ttttatttgg atctgcatgg gaaaaaagac ctctatccaa atattgagaa
     9721 gactttgaaa ttagtagaat tgtgggaagc tcgcaatcgg aaacccaagg gattctcgtt
     9781 tggtatgaaa caacggactg ctttggcaat tgccttggtt gcggagccag atttccttat
     9841 cttagatgag ccgtttgtgg gcttggaccc gattggtgtt cagaaattga ttgatatttt
     9901 gaagcagtgg tcgagtgagc gacaaatttc catgctgatt tcgagtcacc aactggggga
     9961 gctggaggcc ttgtgcagcc gctatgtcta tatcgaatcg ggagaattgg cagaggcttt
    10021 tgaaggcaaa tctcatccaa gtgtgctcgt gcagttgaat acgactaaaa acctagactc
    10081 tgtagaggct ttgctcaatg accatgtggt gctagagggg gaagtgttag aaatttccac
    10141 tgctacacct accagtgagc taaatcagat ttttggtgtg ctggctcgtc aagaattgat
    10201 tgtgaaacta gaagtgaaag agaatcactt gaaagaaatc tttacgaaag ggtagtgagt
    10261 atgaaacaaa tttttccagc tatctttaaa acgatttgga agcgaaagga gacgcagatt
    10321 tatctcctgt tcactttgtt tccttttatt tatctggtca cttcatttat tgaagggtcg
    10381 aattttatgc aaattcatgc tagtgagggg tcggttagcc ttgtagcctt tacgaatatg
    10441 atgatgagct ctgtggatag ttttattctt cctagtttga ccctgtattt cttggctatc
    10501 tctgtcttta ggaaggaagt agatgaacat accatgtttt tatacagaga tcttgggcgg
    10561 aaacagattt tctggtctaa atatttgggt ctcttagcaa caattgttat tttctatggt
    10621 ctcttctttg cgacatctgc atttgtacat tatgttcgag taattcacct gccttttggc
    10681 agtccgtccg tttttgatac tagtttggca gagagtttga gtaatgtgtt ttgtattgtc
    10741 gcttatttac taaaagatat tttatcggtt agtttggcaa ctgctctttg tttgtatctg
    10801 aaaaatatta ccacaatgat cataggattc ttggtgacga ttacgatgat gattttagca
    10861 gttgttggcg gtccagttgc gatgattttt ccaactagtt atatgccttt agcgagcgaa
    10921 ggtctaacag gagtgggact tgcttactta ggagctattg gtgtgacgct tgtttacgca
    10981 ctcgtattta ctaaaattgc tgcgaaaaaa ttcaagaatt tggagttcta ggtatgaata
    11041 gaagactcgt aggagtattg ttgaaatcgc tcaataaaac gatgttcttg tttggaatag
    11101 cgctgagtgc tcttggggtt ggaatgggct tattccttcc ccagtttatt ggtcagttgc
    11161 tagatcaaac ctatttaagc aatctattaa cacgaccaga attgctggct ggcttcatcc
    11221 ttttctttgt atcggtttat acggtacaag ccctatccaa ttatttcatc gggcgtagtg
    11281 gtggtaacgc actcaaacag ttgcaacaat atatttatga atccttgttg accacatatg
    11341 taaaggactt ggatcagtac caatccggtg atcttgccag tcgtttgacc aatgatatgt
    11401 cggttgttct gaacttcatc accgttattc ttccaaattt cttgatgaat ggtttgatgg
    11461 ttatcgggtc aatttatttt ctgtggacca tcagtccgtg gctcacaggt cttagtctct
    11521 tgttgcttcc tatgttgtca atggttatga ttccaatgaa tcagcggttg gaaggttact
    11581 actctgctta tcaagaggga ttagggcagg tttctagtag aattagtcat aaatttacaa
    11641 cgattcgttt gatgaaggcc tttcagggag aaaagcatga acaacgagag atgggcaagt
    11701 cttttcagaa actgtcgcaa acctttgaga gaatgattag actgtcagcg gtgcaacata
    11761 ctttggttag tagcttgatg acgggtttta tcattctgat gttgctggta gcaggtatag
    11821 aagtgaccaa gggagtgatg accatggcta cattgacaac ctttgtattg tacatgatgc
    11881 aactgattga tccagtaaca gatattgcct cttccttaaa tgaactaacg gagtttcagg
    11941 cggtgtctaa acgtttggta gagttgctgg agctgactaa ggaagaacag gcagatacag
    12001 agttggttga tgaagctagt atccagttgg aaaatgttcg gttttcctat catacagatc
    12061 cggttttgaa tggagtatcg gttagaattc ctgaaggagc tcatgtggcg attgttggtc
    12121 caagtggagc aggaaaatca actatttttg ccttgctgat gaaatactat caagactacc
    12181 aaggagagat tcggattggt caacaatgct taagtgatat ttcaaccaag gagatgagaa
    12241 gattgatttc ctttatacct caagataata ccctcttcca tgggacgatt agagaaaatc
    12301 tattgtatgg aaagaacgag tcagtgtctg aagagcgtat tgctcatatt ctcaaggagt
    12361 tgggattgtc tcatttagta gctgagttgg aagatggttt agatactcgg atttcagaaa
    12421 atgggacagg tttgtcggaa ggccaaaaac aacgatttag cattgcgaga gccttgttgt
    12481 tagagcatcc tatctatttg ttggatgagg cgacagcaag tttagatact gtcacagaac
    12541 gtgtcattag caaagcgatt gaccgtttaa cagctgggaa aacaaggcta accattgctc
    12601 accgtttgca cacagtgcgt gaggcggatg cgattctggt cttagataaa aatgggcaag
    12661 tagccgatta tggtcctcac cagcagttag tggagagaaa tcatctctat caagatttct
    12721 taagaggctt accgcaagcc agttagtgaa tgggagtcga tggaccgact agtctaagtc
    12781 tagggttacc taataataaa atggaatact gatgattact tgcacaataa atagatagga
    12841 gaagagaatg aaacaaacaa cttacacatt atctttggga ggaaatgata gcggggattc
    12901 gaaagtttca aagatggaaa aaagtttgaa aaatatatgg aggggatcgc agagcggtta
    12961 cggcgttctg ggaagaggag tattgataaa tggtttatcc gtgtgcggat tgaggagtaa
    13021 agtagctatg accaaaattc acagacgttt ttataaatag tgaaaaatag aatgaattct
    13081 cttttagttt cccttaagtt tggcgagtta tactttattc aagctagaaa tagcgagact
    13141 tttactgaaa tagtttcaat atcgtcatcc gtaagagcta aagctcaaac ggctggcata
    13201 tcttttcaat ccgtatctct aagtcgcaag cgacaaggac tagggattat ataatctcct
    13261 gagaatactg gactcactga gtctggtatt ttcattttat gctataatgg tttcatgaca
    13321 aatcgaattt tagatatgga acaaatgcag gacgaggagt atgttgagcg taccctgcgt
    13381 ccgcagaaat taaatgaata catcggtcag gataaggtca aggaccagct caaaatcttt
    13441 atcgaggcgg ccaagctccg tgatgaagcc ttggaccata cccttctttt tggcccaccg
    13501 ggtctgggga agaccaccat ggcctttgtc attgccaacg aattgggcgt caatatcaag
    13561 cagaccagtg gtcctgttat tgaaaaagcg ggtgacttgg tggcccttct caacgacttg
    13621 gagcctggcg acgtcctctt tatcgatgaa atccaccgta tgcccatggc ggtcgaggaa
    13681 attctctact ctgctatgga ggatttctac atcgacatta tgattggagc aggggaggcc
    13741 agtcgctccg tgcatttgga gttgccaccg tttaccctga ttggagcaac cactcgtgcg
    13801 ggtatgctat ccaatcctct gcgggcccgt tttggtatta ccggtcatat ggagtattat
    13861 gaactggctg atttgacgga gattgtcgag cgaacagcgg acatctttga catggagatt
    13921 actcatgaag ctgctattga gctggctcgt cggtctcgtg gaactccccg tatcgccaac
    13981 cgcttgctca agcgggtgcg ggatttcgca cagattatgg gagacggcct gattgatgat
    14041 aacattacgg acaaggccct gaccatgctg gatgtggacc gcgaggggct ggactacgtg
    14101 gaccagaaga ttctccgcac catgattgag atgtacggcg gcggtcccgt cggcctcaac
    14161 actctgtcgg tcaatattgc cgaggagcgt gagacggtgg aggacatgta cgaaccttac
    14221 ctgattcagc agggcttcct catgcggaca cggacggggc gggttgcgac agccaaggct
    14281 tacgagcact tgggttatcc ctatacggaa aaataatggc agagcagatg agacgagtaa
    14341 cgaccttgtt tcgagttcgg tctaaactag gaatggagat aagatgacac cgacatttat
    14401 ttgggatttg gatggaacgc tcttggattc ctatgaagcg attttggctg gtatacagga
    14461 aacctatgag cagtttggcc ttccttttga ccgtgaagaa gtaaggaatt tcattcttcg
    14521 ctattctgtc aaggatttac tggtgcgtga tgcggacaag tacggtctag atagccatga
    14581 acttaatcgt gtgcgtgcga cttccttgaa ggagaaaaat acgcagattc ctttgatgtc
    14641 tggtgcgcgt gaaattctgg actggacagc agagaaagga attcaaaatt tcgtttatac
    14701 acacaagagt gacaatgctt ttcaggtttt ggaggatttg ggtgtccgtc aacatttcac
    14761 agaaatcttg acaagcgatt ctggttttgc ccgcaaacca agtccagaag ctctgctatt
    14821 tctcatcgaa aaatacggac tgaacaaaga aaatacctac tatatcggtg accgtttgct
    14881 cgatgtagaa acagctatca acgcagggat tcaaagcatc aacctgcaaa ttgatggtgt
    14941 ggagcagaat tggaagattg tttctttatt ggacataaaa caaatgttaa ctgatgaata
    15001 caaataaaaa caaacgtaaa accgtttgtt tcagactgaa gacaaagtcc ttagaattga
    15061 ttttctaagg gcttttcttc g
//
LOCUS       DASFQD010000055        14586 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.055, whole genome shotgun sequence.
ACCESSION   DASFQD010000055 DASFQD010000000
VERSION     DASFQD010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 14586)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14586)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14586
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.055"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            163..1437
                     /locus_tag="U1021_001286"
     CDS             163..1437
                     /locus_tag="U1021_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEM4711827.1"
                     /translation="MKKIGRYVTLLAAAGLLAACSTSTESSKTTGGSSSGKTEISYAI
                     WDSGQEPGLRKIADEFEKKNPDIKINIQVSDWDSYWTMLEAGATGGSLPDTFWMHSNE
                     IYRYGSNEMLLPLDEYLAKSEDAKLANFPDGLNEIYNINGKQYAIPKDFDTIGLWYNK
                     KLFDEAGIPYPDDTWDWNKLKEVAKKLTKPDGSQYGFGAGLSNQEGYYNFIYQNGGKV
                     ITDDLKSGYADPKTIEALDYYFSFVKEKISPAITVDKERAEAFQNGQVAMSVFGSWNL
                     SGFTANDYIRENADVAVLPKGPDGTRATIFNGLGHAIAATTKHPDAAWKWVEYLSSKE
                     AQEMQATLGVAISAYKGAADTWVDSNKNFTIKNYVDMVDYAQIRPYSQTTIKWEDKAY
                     ELLKPAYLGEKATEEAAKETADMMNAELATEK"
     gene            1506..2399
                     /locus_tag="U1021_001287"
     CDS             1506..2399
                     /locus_tag="U1021_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM4711828.1"
                     /translation="MFRKKGSLNEAIWGWGMVAPTIIGLVVLNIIPIFQTMKMSFHKS
                     GDFGKGDIFVGLANYQRMLGDAQVWQATWNTLKYTILVVPATVALAMLLAVLLNSKIK
                     GKHIYRTIFFLPMVAAPAAVTMVWKWLYNTDFGLINYILRRLGLGAVNWIEDPKIALY
                     SIALIGIWSTVGYSMILILAGLQEIPTDFYEAARIDGASPAKQFFSITLPLVSPTLFF
                     VVVTSVIQSMQVFDVIYMMEDVRSPAYDKTVSLVYLFYNNSFKYSDKGYGSTIVMLLL
                     LIILVITFVQMKVQKKWVHYR"
     gene            2410..3240
                     /locus_tag="U1021_001288"
     CDS             2410..3240
                     /locus_tag="U1021_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM4711829.1"
                     /translation="MKQSAFKSTIWMHAFLILVAMGMLIPFVWMVLTSFKTVTESTQM
                     NPFHFLPSNWMVSNYTEAIRTNNFPILYLNTILMMLWRIFSSVMFSAMAAYAFARLEF
                     PGRNFLFGLVLFQMMVPPQLFVIPQYLMIDQLGMRNTIFALVFPGIVSAFGTFLLRQF
                     FMGLPKELEESAKLDGCNIGQTFFKVMLPLAKSGLIALAIFTALFAFKDLLWPLIINS
                     EADKATLSSALSKIQGAYAVNYPQLMAASVLAIWPMLVLYVIFQKQFIQGIATSGGKL
                     "
     gene            3250..5451
                     /locus_tag="U1021_001289"
     CDS             3250..5451
                     /locus_tag="U1021_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HEM4711830.1"
                     /translation="MGIIFHEKTKEFHLYNEFISYVLTVLPNGHIGSLYYGKRVTETA
                     SYQYVREDEYRALTSFVEDDDRFFSLQYANPEFACYGTTDYFSPTFELVQKDGSSLSH
                     FVYQGHRIYAGRSALKGLPHLYLDEEGQADSLDIYLLDEESQTRLVLSYTIFRDYPAV
                     TRSARFEQLGEQSVCLNRALSMTLCLPDMDYDWLHLDGAWGRERHLQLSPLHQGCQSI
                     YSLKGASSAEHNPFMALKRPTADEQQGEVLGFSLVYSGNFLAQVDVSSFQKTRVSMGI
                     HPERFSWTLDKGEEFQTPEVVMVYSEHGLNGMSQTYHRLFQKHLVRGYWRDRERPVLL
                     NNWEAMSFDFDEETILSLAKEAAGLGVELFVMDDGWFGKRNHDRAGLGDWTVNREKLP
                     SGLTGIIDQVHAMGMKFGLWIEPEMVNKDSDLYRAHPDWIFHHPQHSRSHGRHQYTLD
                     LSREDVYQNIHDQLHRLLAEHDIDYIKWDMNRYMTEVFTCTREAERQGETFHRYILNL
                     YRLYDSLIAAFPTVLFESCSSGGARFDPGMLYYAPQTWVSDDTDAMERLKIQYGTSMV
                     YPLNSMGCHVSASPNQQLGRATPLSTRANVAFFGSFGYELDLFECSQEELEEMKEQIA
                     FYKAHRRIFQQGIFTRLKSPFDGEITAWQVQSSDGQQVIVGYYRRLTTANLAYQRLYL
                     QGLEEEAVYHLDGEVYTGSQLMHTGLSIRHGDHVGDNKDFTSYLMLLQKRQ"
     gene            5726..6427
                     /locus_tag="U1021_001290"
     CDS             5726..6427
                     /locus_tag="U1021_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEM4711831.1"
                     /translation="MKKYAFREGMRDAIPTVLGYASIGLACGVVSVNSGISTVEMGLM
                     SLLIYAGSAQFVMCAMIFAGAPLLSIAVTVFFVNLRNFLMCLHATTIFQGNRLGSNIL
                     IGSFVTDESYAVLLRKQIEHHTITPEWMYGNNFASYASWVTFTTLGNLIGGLIPNPEQ
                     LGLDFALVAMFVGIFAGQLEAMVRTIPLKKIGLILLAVVLAYIGLSMMVSSYVAVLLA
                     TLLGCFVGVMIDDKN"
     gene            6414..6737
                     /locus_tag="U1021_001291"
     CDS             6414..6737
                     /locus_tag="U1021_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HEM4711832.1"
                     /translation="MIKTNILLIILMAALVTWVPRVLPFVLTQNKSLPPKLVKFLSFL
                     PITIIFALTLSSIMDEKVGSLPSFLPVESLAILPTFFVVLKTKNILLAVLVGVVTTAL
                     LRLIF"
     gene            6747..7769
                     /locus_tag="U1021_001292"
     CDS             6747..7769
                     /locus_tag="U1021_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family putative sulfate export transporter"
                     /protein_id="HEM4711833.1"
                     /translation="MVKENAKGVGLCFLLALVGQWLGHLFPLVGGPVFALLIGMSLYP
                     YFSSKNAFQSGLTFTSKKILQYAVICLGFGLNLSAVLTVGRQSLPIILSTISFALILA
                     FLMWKILPISSHLATLIGVGTSICGGSAIAATAPIIQADDEDVAQAISVIFLFNVLAA
                     LVFPSLATWLGFSTDSGQAFGMFAGTAVNDTSSVTAAASTWDSVYGLGSQTLDTAVTV
                     KLTRTLAIIPITTVLAIWQTRGKGVQADKKSFLTGFPTFILYFILASLITTIAGGFGI
                     GADWFAPLKSLSKFFICMAMVATGLRTNVFALVKNGRAALMVGLVCWFGVTALTLVWQ
                     AILGIW"
     gene            8231..8431
                     /locus_tag="U1021_001293"
     CDS             8231..8431
                     /locus_tag="U1021_001293"
                     /inference="COORDINATES: protein motif:HMM:TIGR01168.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HEM4711834.1"
                     /translation="MSYKDMFRKEQRFSFRKFSFGLASAVIANVIFGGAIANSPVVHA
                     NTVTEAQATAVSERIAIHTIYC"
     gene            8475..14441
                     /locus_tag="U1021_001294"
     CDS             8475..14441
                     /locus_tag="U1021_001294"
                     /inference="COORDINATES: protein motif:HMM:NF019202.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
                     /protein_id="HEM4711835.1"
                     /translation="MVSVYTVETIATATDYLTADLVPEGYAIVSGLGEVTVTEKTDNI
                     FTVKVDKIAPEAVATTTTAESTTSETSTLIVPSDATTVASDVTKPASLTATQPIPVTS
                     EVAEAEVAPTTSEESAKPAERTVYLSYITQYVNEDRQVVDSKGHLVAVKTTDETAKTQ
                     VTVSVSKDVPAGYELVQAKPEITLQLVEKQINVLAFVVTKKSEEEEIAESQLSNRDVL
                     MRLSLEANLLADKALRQVAKEQAGNTELATAANKAKELATNDVLGSETKTEEELGEQV
                     KTVRASIENLAVEMLKVDEDGILTAMLDASITNQAPVITVKDSSTAIVPVPTTTTSPE
                     PDGDFTKPNKTGETDFPAFFVVAGKEFTEANSKVRFTATDADGSLSSLEIKTGNNYLI
                     SNEENATEHGLYGKADKNIGEAVIYGNFNVQKGEVVTWYVEANDGTVDGRRDFYLFSY
                     GVEKRSEIPVRKSVATGVTAADITNQLIVDLTKDGGTGRLNSKFETKFNANYVAVPTG
                     KNTTVTEDQKAGKQVWHEIEGELPITAGVHTVTVKSTNIHGQVVRNNITVELYKLKDI
                     SRDTVDQYTDNPVPIHAIVELGSTGDVGTVKLEGVLPESFKLENFNLKDDVATELAKR
                     NLEFVKAESVGVDGTVGTIRAKNGGKVEYTGSGNIDYRFVYSYMEGTETKTVDFTYTI
                     LFTDTQAPTVKPAYEYIRVVGEGYTISVPGMDNAYLNPDKINGRLDIYENNVRFEGTS
                     ALGKLGVTSVVSKLDDSGKDTSGNSDDQGGNSTKFNINIVGTAPATAGTGIYYLRVGD
                     DNYPSGPKGKKAADHPTNPNAAEENVSVTPITITFVDKVKPITPIPVADQAHLTPTEK
                     KAVVDAVKEANPGNAKLQALPESAFTVNSDGSVSVNYSGENVDGATDTIKNATTKLAG
                     TQNEAKAEIDRKLAENKKAIEEKRDEAIAEINDDIYLTDVQKEVAREAVTAAAGDALK
                     NLDTKATEAKENIDKATTVSEINNAKTDGEAALDNAEAVGEKSIDWTKEKERAKAEVE
                     NQSTDALKIINNNPNLSYEEKKAYFDNINATKETAIDNIDKAKDSGDITVAIEDAVKA
                     SETEVLKAAKQDALNKLEKDAAKAKEDVADNSNLTKEQLEKALEDIQNDLDKAKAAVN
                     EAATPDAVQKEEDKGVAAIAKDVLDATKQNALNQLEKDAARAKEDVAKNPNLTKEQLE
                     KALEGIQNDLDKAKTAINEAATSAAVQEEMNKGVTALAKDVLDAAKQDAKNKIDKEAE
                     SAKKAIDTNLNLTPEEKESAKKVIDTDAQAATAAIDKASTPDAVQVEEDKGVAAINLI
                     TAKADAKGAVAAKLADEIKKLEDKQAEAEKAIDASTMTEEEKAIAKKALQDVVDKGKA
                     ELEDAARVATNEIHEATTTEKAKAAALAGEKSLTDAGKKARDAVELAKDKELAKEAIR
                     TEEEEATKAVEKLAEDTRKAIEENPNLSDEDKQAEIKKLTDAVAKTLETIRDNATTAM
                     QEAEKAQALADLEKAKETQKIADKAAIDRLTILVKDGELEATKRDVLNQLEKDAARAK
                     EDIAKNPNLTKEQVDKALEDVQKDLDKAKTAINEAVTSDAVQAEMDKGVAALAKDVLD
                     AAKQDAKNKIAKDAAAAKEAIDANPNLSDAEKEASKKAVDADAKAATDAIDASTSPVE
                     AQSAEDKGVGSIAQDVLDAAKQDAKNKIAKEAESAKSAIDSNPNLTDAAKEAAKSEID
                     KAVEEAIVLINGVRTYQELEKIKLPMAALIKPAAKVTPVVDPNNLTEKEIARIKTFLK
                     ENNNLPEGTEINVSKDASVTIKYPDGTIDLLSPVEVVKQADKTAPTVANDGKGNIVIV
                     PSEKAVELVVSYVDNNGKSQTVVVTKGTDGLWTASNTVVIVDPVTGQVIVPGSVIKPG
                     TVVTAYSKDEVGNSSDSAEAEVVAVDENNSAAGVKVKSVTTNANNVEKKAKQLPNTGE
                     EANSATSLGLVALGLGLALLAAKRRRDEEA"
BASE COUNT         4444 a         2637 c         3405 g         4100 t
ORIGIN      
        1 tatgtaaatg tgacatttta tttgaaaaaa ttaaaaaata tcccaaaatc atatggaata
       61 tgtcaaatat tcctatttga ttataaagcg cttacatgtt atagttgtag tagaaataac
      121 aaagttcgtc gacgtattcg acaaaagaaa aggagtatta tcatgaagaa aattggtcgc
      181 tatgttacct tgcttgcggc tgcaggcctg ctggcagcgt gttctacttc gactgagtct
      241 agcaaaacta cgggaggaag tagttcagga aagacagaaa tatcctatgc tatttgggat
      301 tctggtcaag agcctggttt gagaaagatt gcggatgagt ttgagaaaaa gaatccagat
      361 attaaaatca atattcaagt atcggactgg gattcctact ggaccatgtt agaagctggt
      421 gcgacaggag gttcattgcc tgataccttc tggatgcatt caaatgagat ttatcgctat
      481 ggttccaatg aaatgctatt gccattggat gaatacttag ccaagagtga agatgctaaa
      541 ctagctaatt tcccagatgg cttgaatgaa atctacaaca taaatggtaa gcagtacgct
      601 attccaaaag atttcgatac aatcggtctt tggtacaata agaaattgtt tgacgaagca
      661 ggcattccat atccagatga tacttgggat tggaataagt tgaaagaagt agcgaagaaa
      721 ttgaccaagc cagatggtag tcagtatggt ttcggtgctg gtttgagtaa ccaagagggc
      781 tactacaact ttatctatca aaatggtggt aaggttatta ctgatgattt gaaatcaggc
      841 tatgctgatc ctaagaccat tgaggctttg gattactact ttagctttgt caaagaaaaa
      901 atttcaccgg ctattacagt agataaagag cgggccgaag cattccaaaa cggtcaagtg
      961 gctatgagcg tcttcggttc ttggaattta tctggtttca ctgctaatga ctacattcgt
     1021 gaaaatgctg atgtagctgt tttgccaaaa ggtccagatg gaactcgtgc aaccatcttt
     1081 aatggattgg gtcatgccat tgctgctacc actaaacatc cagatgctgc ttggaaatgg
     1141 gttgaatacc tcagctcaaa agaggcacaa gaaatgcagg caacacttgg tgtggcaatc
     1201 tcggcttata aaggcgcggc agatacttgg gtagattcaa acaaaaactt tactatcaag
     1261 aattatgttg acatggtgga ttatgcacag attcgtccat attcacaaac aaccatcaag
     1321 tgggaagata aggcttatga gctattgaaa cctgcttatc ttggagaaaa agcaactgaa
     1381 gaagctgcca aagaaacagc tgatatgatg aatgctgaat tagcaactga aaaataggta
     1441 ggaggtcttg ggaagttgat tcttccccgg accttcttat taaaatgaag aaggatgggg
     1501 ataagatgtt ccgaaaaaaa ggaagtttaa atgaggcaat ttggggatgg ggaatggtag
     1561 caccgaccat tattggatta gtcgtgctca atattattcc tattttccaa accatgaaga
     1621 tgagttttca taagagtgga gatttcggca aaggtgacat ctttgtcggc ttggcaaatt
     1681 accaacgcat gttaggggat gcgcaagtgt ggcaggcgac atggaatacc ttgaaatata
     1741 cgattctagt tgttccggct accgttgcct tggccatgtt gcttgcagtt ttgcttaatt
     1801 ctaagattaa aggtaagcat atttatcgaa ccattttttt cttgcctatg gtggcagcac
     1861 cagccgcggt gaccatggtt tggaaatggc tctacaatac ggacttcggc ttgattaact
     1921 atatcttgcg tcgtttggga ctgggtgctg tgaactggat tgaagatcca aagattgctc
     1981 tatactcaat cgctttgatt ggaatttgga gtacggttgg ctatagtatg attttaattt
     2041 tagctggttt gcaagaaatt ccaacggatt tttatgaggc agctcgcatt gatggagcta
     2101 gtccggccaa gcaatttttc tccattaccc tgcccttggt ttcaccaacc ctgttctttg
     2161 ttgtggtaac cagtgtcatt caatccatgc aagtctttga tgttatctat atgatggagg
     2221 atgttcgtag tcctgcctat gataagacag tatctctggt ttatctgttt tacaataatt
     2281 cctttaaata ttcggataag ggctatggct ccaccattgt catgttgttg ttattgatta
     2341 ttcttgtcat tactttcgtt cagatgaagg tacagaaaaa atgggtgcat taccgttaag
     2401 gaggttcatg tgaaacaatc agcttttaaa tcaacaatct ggatgcatgc cttcttgatt
     2461 ttagtggcaa tgggcatgct aatcccattt gtttggatgg tgttgacgtc ttttaaaacg
     2521 gtaaccgaat ccactcagat gaatcctttc cactttttac caagtaactg gatggtgagc
     2581 aattatacgg aggctattcg gactaataat tttccgatac tctatctgaa caccattttg
     2641 atgatgttat ggcgtatctt tagctcggtt atgttttcag ctatggcagc ttatgccttt
     2701 gctcgactgg agtttcctgg gcggaatttc ttgtttggtc tggtcctctt tcaaatgatg
     2761 gtgccacctc agttattcgt cattcctcag tatttgatga ttgaccaact tggtatgcgc
     2821 aatacgattt ttgctctggt attcccagga attgtcagtg cctttgggac attcttgctc
     2881 cgtcaatttt tcatgggtct tccaaaagaa ttggaggaat ctgcaaaatt ggatggttgt
     2941 aatatcgggc agaccttctt taaggtcatg ttgcctttgg ccaagtctgg cttgattgcc
     3001 ttagcgattt ttacggcttt gtttgctttc aaggatttgc tgtggccatt gattatcaac
     3061 tcagaagcgg acaaggctac cttgtctagc gcactttcta aaattcaggg agcttacgct
     3121 gttaactatc ctcagctcat ggctgcaagt gttttggcta tttggccgat gttggtacta
     3181 tatgtgatat tccagaagca gttcatccaa gggattgcga catctggtgg aaaattatag
     3241 gaggctacaa tgggaattat ctttcatgaa aagacaaagg aattccatct ttacaatgag
     3301 tttattagct atgtgttgac ggtcttgcct aatggtcata ttggtagttt gtattatgga
     3361 aagcgtgtaa cagaaacagc ttcctatcag tatgtgcgtg aagatgagta tcgtgctttg
     3421 acttcctttg tagaagacga tgaccgtttc ttttcgctcc aatatgccaa tcctgaattt
     3481 gcttgttatg gtacaacgga ctatttttct ccgacttttg agttggtgca gaaggatggt
     3541 agtagcctat cgcattttgt ctaccaaggg cataggattt atgctgggcg atcggcattg
     3601 aaggggcttc ctcatctcta tctggatgag gagggacagg cagatagttt ggatatttat
     3661 ttgttggatg aagagtcgca gacacgcctg gtcttgtctt atacgatttt tcgagattat
     3721 ccagcggtga ctcgctctgc tcgttttgaa caactcggag aacaatctgt ctgtttgaac
     3781 cgtgccttga gtatgacact ttgtctgcct gatatggact atgattggtt gcatttggat
     3841 ggggcttggg ggcgtgagcg gcatctgcaa ctatcgcctc ttcatcaagg ttgtcagtct
     3901 atttacagtc tcaaaggggc tagtagtgcg gagcacaatc cctttatggc tttgaaacgc
     3961 ccaactgcgg atgagcaaca gggagaggta ctaggcttct cgctcgtcta tagcggaaac
     4021 tttttggcgc aggtggatgt gagttctttc caaaaaacaa gagtgagtat gggaatccat
     4081 cctgagcgtt tctcttggac attagataag ggagaagagt tccagacgcc tgaggttgtt
     4141 atggtttata gcgagcatgg tttgaatggc atgagccaaa cctatcaccg cctcttccaa
     4201 aaacatctgg tacgtggcta ttggcgtgat agagaacgac ctgttctctt gaataactgg
     4261 gaagccatga gctttgattt tgatgaggaa acaattcttt ccttggccaa agaggctgca
     4321 ggtcttggtg ttgaactctt tgtcatggat gatggttggt ttggcaagcg aaaccatgac
     4381 cgagcaggct tgggagattg gacagtcaat cgtgagaaat tgccaagtgg cttgacaggg
     4441 attattgacc aagttcatgc tatgggaatg aaatttggac tttggattga acctgaaatg
     4501 gtcaataaag acagtgattt ataccgagcg catccagact ggattttcca tcatcctcag
     4561 catagtcgat ctcacggacg ccaccaatat acgttggatt tgtcgaggga ggatgtttat
     4621 caaaatattc atgaccaact ccatcggctg ttggctgagc atgatattga ctatatcaag
     4681 tgggatatga atcgttacat gactgaggtc tttacatgca cacgggaggc ggagcggcaa
     4741 ggtgagacct tccatcgcta tattctcaat ctctaccgtt tatatgatag cctaatagca
     4801 gcttttccga cagtcttatt cgaatcttgt tcaagtggtg gagctagatt tgacccaggg
     4861 atgctctact atgcaccgca aacctgggtc agcgatgaca cggacgccat ggaacgcttg
     4921 aaaatccaat atggaacgag catggtatat cctctaaata gcatgggttg tcatgtgtca
     4981 gctagtccga atcagcagtt ggggcgtgct actccactaa gcacacgtgc caatgttgca
     5041 ttctttggaa gttttggcta tgagttggat ttgtttgagt gtagccaaga agagttggaa
     5101 gagatgaagg agcagattgc cttttacaag gctcatcgta ggattttcca acagggtatt
     5161 ttcactcgtc tgaaaagtcc attcgatgga gaaataacgg cttggcaggt ccaatcctcg
     5221 gatgggcagc aagtcatcgt gggttattac cgtcggttaa caactgccaa tcttgcctat
     5281 caacgcttgt acttgcaggg gttggaagag gaagcggtct atcaccttga tggagaagtt
     5341 tatactggta gccaattaat gcatacaggt ttgtcgattc gacatgggga ccatgttgga
     5401 gacaataaag actttacttc ttatttgatg ctcctccaga aacgacagta gcctccctat
     5461 ccataggccc agctatcggc tgggtctatt ttatgcagaa agtacatcaa taagggcaag
     5521 acctctactt atactcttcg aaaatcaaaa ttatccgttg tcaacttgcc ttgatgaact
     5581 ccagttctat cttcggcttc gtttcctagg ctacttttga ttttcattga gtattagata
     5641 taagaattct tgaaaaacga gttgcaatgt gagaaaatga gagaataatt cttcaatcaa
     5701 ttagtgaggg gaagggagat aatgaatgaa gaaatatgct tttcgtgaag ggatgcgcga
     5761 tgccattccc actgtattag gctatgccag tattggtcta gcctgcggag tcgtatcggt
     5821 taattcaggc atttctactg tggagatggg gctgatgagc ctattaatct atgccgggag
     5881 tgctcaattt gtcatgtgtg ccatgatttt tgcaggtgcg cctttgttat ccattgcagt
     5941 aaccgttttc tttgtcaacc tgcgtaattt tctgatgtgc ttgcatgcga caactatttt
     6001 tcaaggaaat cgtttagggt cgaatatctt gataggatcc tttgtgacgg atgaatccta
     6061 tgcagttctt ttgcgtaagc agattgagca tcataccatt actccagaat ggatgtacgg
     6121 aaataatttt gcaagctacg cctcttgggt tacattcacg actctcggca atctgattgg
     6181 tggtctcatt ccaaatcctg agcagcttgg attggacttt gccttggttg ctatgtttgt
     6241 cggtattttt gcaggtcagt tagaggctat ggttcggacc attccgctga aaaaaattgg
     6301 cttaattctg ctggcagtcg ttctggccta tatcggtctg tctatgatgg tgtcgtccta
     6361 tgtggcagtg ctcttggcga cactcttggg ctgttttgtg ggggtgatga ttgatgataa
     6421 aaactaacat tttactgatt attctaatgg cggccctggt gacctgggtg ccacgcgtcc
     6481 tgccttttgt cctgacgcaa aataaatctc tccctccaaa gttggtgaaa ttcctcagct
     6541 ttttgccaat cactatcatt tttgcattga ccctctccag tattatggat gagaaagttg
     6601 gctccttgcc aagttttctc cctgtggaaa gcttagctat tcttccgaca ttttttgtgg
     6661 ttttgaaaac aaaaaatatc cttttagcag tcttggttgg tgttgttaca accgcgttgt
     6721 tacgtttgat attttaggag gtttttatgg taaaagaaaa tgccaaaggt gtaggacttt
     6781 gtttcctttt ggctttggtg ggtcagtggt taggtcattt atttccactt gtaggtgggc
     6841 ctgtttttgc ccttctaatt gggatgagcc tgtatcccta tttttcaagt aaaaatgcat
     6901 ttcagtcagg cttaaccttt acttccaaga aaattttaca gtatgctgtg atttgtttgg
     6961 gatttggatt aaacttatca gcggtcttga cagttgggcg tcaatctctt ccaattattc
     7021 tttcgaccat tagttttgct ttgattttgg cattcctgat gtggaaaatc ttgcccattt
     7081 catctcatct ggcaaccttg attggcgtag gtacctctat ctgtggaggc tctgccattg
     7141 cggcgactgc tcccattatt caggcagatg atgaggatgt ggcacaagca atctcggtca
     7201 tctttctctt caatgtcttg gcggctttgg tctttcctag tctggcaact tggcttgggt
     7261 tttcgactga ttcgggtcag gcctttggga tgttcgccgg aacggcggtc aatgacacct
     7321 cctctgtgac agcagcggct tcgacttggg atagcgtata tggtctaggc agtcagacct
     7381 tagatacagc agtgacggtt aagctaacac gaactttagc cattatcccg attacaacgg
     7441 tcttagcaat ttggcaaacc cgagggaagg gagttcaagc agacaagaag tccttcctga
     7501 caggttttcc gacctttatc ttgtatttta tcttagctag tctaatcaca acgatagcgg
     7561 gtggatttgg tataggggca gattggtttg ctccgttgaa gtccctctct aaatttttca
     7621 tttgtatggc tatggtggcg actggtttgc ggaccaatgt ttttgccttg gtgaaaaatg
     7681 gcagagcggc tctcatggtt ggtctggttt gctggtttgg ggtaacagcg ttgacattgg
     7741 tctggcaagc aattttggga atctggtaag agaaatgtga gtggaaaaag tccattttct
     7801 acttcaagca atttttgaaa agtaaatcgc agtgccgcag ggctttttgt cgttcgtttt
     7861 ttagtaccgt tgaacaactc aaaactagtt agttttgttt aaaatgtaat tgaattgcct
     7921 ttttaagtag gctgtttaca cgatatttgt cttcctttat ataaatatga tagattttca
     7981 gtaaattttt caaaaaaacc tcaaaaataa cagatttttt cttgtatctt tgaggcataa
     8041 ggagtataat ggtgacggta ttcaagtaga aattttatat actctggatg aaaacattct
     8101 gtctacttta aaataaataa tctactgggt atccttctgc taagttttta aagcaggagg
     8161 tgtgtttttg tacatggtgt tacaggaacc agaaatgatg gcattcgcca gtaaaatata
     8221 ggaggatatc atgtcttata aagatatgtt cagaaaagaa caacgttttt cttttcgtaa
     8281 atttagcttt ggtctagctt cggcagtcat tgcaaacgtt attttcggag gagcaatcgc
     8341 aaacagccct gttgttcatg ctaacacagt gacagaagca caggcaactg cagtgagtga
     8401 gcggatagcc atccatacca tatactgtta aaatcgagga tcaaacaggt aaggttgttg
     8461 aaacgaaagt gaaaatggtt tcagtatata cagttgagac tattgcaaca gcaacagatt
     8521 acttgactgc tgaccttgtg ccagaaggct atgccattgt atcaggatta ggtgaagtga
     8581 ccgttactga aaaaacagac aatatcttca cagttaaagt agacaaaatt gcaccagaag
     8641 cagtagcaac aactacgaca gctgagtcga ctacatcaga aacatcaaca ttgattgtcc
     8701 cgtctgacgc aacaacagta gcatcagatg tgactaagcc agcaagttta acagctacgc
     8761 aaccaatacc agtgacgtca gaagtagctg aggctgaggt agcaccaact acatcagaag
     8821 aatcagcgaa accagcagag cgtacagttt atcttagtta catcacacag tatgtcaatg
     8881 aagacagaca agttgttgat agcaagggtc accttgtagc tgtaaaaaca actgatgaaa
     8941 cagcaaaaac acaagtaacc gtttctgtat ctaaagacgt accagcaggc tacgaattgg
     9001 tacaagccaa gcctgaaatt actcttcaat tggttgaaaa acaaatcaac gttttggctt
     9061 ttgtagtaac taaaaaatct gaagaagagg aaattgctga gtcacaattg tcaaaccgtg
     9121 atgtcttgat gcgattgtct ttagaagcaa acttgcttgc ggacaaggca ctacgccaag
     9181 tagcgaaaga gcaagctggt aacactgaac ttgcaacagc agctaacaaa gccaaagaac
     9241 ttgcaaccaa tgacgtctta ggaagtgaga ctaaaacaga agaagaactc ggggaacaag
     9301 tcaaaacagt tcgcgcaagc atcgaaaacc ttgcggttga aatgttgaaa gtcgacgaag
     9361 atggaatctt gacggcgatg ttggatgcaa gtataacaaa ccaagcaccg gttattacag
     9421 taaaagattc aagtactgca attgttcctg tgccgacaac gacaacaagt ccagaaccgg
     9481 atggagactt tacaaagcct aataaaacag gtgaaacaga tttcccagca ttttttgttg
     9541 tggcgggtaa ggagtttact gaggcaaata gtaaagtcag attcactgca acagatgcag
     9601 atggaagttt aagttcgttg gaaataaaaa cagggaacaa ctatcttatc agtaatgaag
     9661 aaaatgcaac tgaacacgga ttatatggaa aagctgacaa aaatataggt gaggctgtaa
     9721 tttatggtaa cttcaatgta cagaaagggg aagttgtcac ctggtatgtt gaggcaaatg
     9781 atggtactgt agatggacgt agagactttt acttattttc ttatggtgtt gaaaagagaa
     9841 gtgaaattcc agttcgtaaa tcggtggcta caggggtcac tgctgcggat attaccaatc
     9901 agttgatagt tgatttaaca aaagatggtg gtactggtcg tttaaattct aaattcgaaa
     9961 ctaagtttaa tgcaaattat gtagcagtgc caactggaaa aaatactaca gttacagaag
    10021 accaaaaggc tggtaaacaa gtttggcatg aaattgaagg ggagctacct ataacggcag
    10081 gggtacatac tgttacagta aaatcaacca acattcatgg tcaagtggta agaaacaata
    10141 ttacagttga actctacaag ttgaaagata tttccagaga tactgtcgac caatacacgg
    10201 ataaccctgt tccgattcat gctatcgtag agcttggttc tacaggtgat gtaggaactg
    10261 tcaagttaga gggagttctc cctgaaagct ttaagcttga aaatttcaat cttaaagacg
    10321 atgtagctac agaactagct aagcgtaatc ttgaatttgt gaaagcggag tctgtgggtg
    10381 tagatggcac ggtggggact attcgtgcca aaaacggtgg taaagtagag tatacaggtt
    10441 caggtaacat agactataga tttgtttact cttacatgga aggaacggag actaagactg
    10501 tcgattttac ttatactatc ttgtttacag atactcaggc accgacagta aaacctgcat
    10561 atgaatatat ccgtgttgtt ggtgaaggtt atactatcag tgttcctggt atggataatg
    10621 cgtacttgaa tccagataaa atcaatggtc gtttagatat ttatgaaaat aatgttagat
    10681 ttgaaggaac ttctgcactt gggaaacttg gagtgacctc agtggtctct aagctagatg
    10741 atagtggaaa agatacgtct ggaaatagtg atgaccaagg tggtaattcg actaaattta
    10801 atataaatat cgtaggaaca gctccagcaa ccgctggtac aggtatctat tatcttcgtg
    10861 taggagatga taattatcca tctggtccaa aaggaaagaa agcggcggat catccgacaa
    10921 atccaaatgc agctgaagag aacgtaagtg ttactcctat tacaataact ttcgttgaca
    10981 aggtgaaacc aatcactcca attccagtcg ctgaccaagc acatttgacg cctactgaaa
    11041 agaaagcagt tgttgatgca gttaaagaag ctaatccagg taatgctaag ttacaggcgc
    11101 ttcctgagtc agctttcaca gtgaattctg atggtagtgt atcggttaac tatagtggtg
    11161 aaaatgttga tggtgcgaca gacactatta agaatgctac cacaaaattg gcaggtacac
    11221 agaatgaagc aaaagctgaa atcgacagga aattagctga aaataaaaaa gctattgaag
    11281 aaaaacgtga tgaagcaatt gctgaaatca atgatgacat ttatttaaca gatgttcaga
    11341 aagaagttgc tagggaggct gtcactgccg ctgctggaga tgctttgaaa aacttagata
    11401 ccaaggcgac agaagcaaaa gaaaacattg ataaagcaac aactgtttca gaaatcaata
    11461 atgccaagac tgatggtgaa gctgctctgg acaatgcaga agcagtaggc gaaaaatcta
    11521 ttgactggac gaaggaaaaa gagcgagcaa aagcagaagt tgaaaatcaa tcaacggatg
    11581 cattgaaaat cattaacaat aatccaaact tgtcatacga agagaaaaaa gcgtactttg
    11641 ataacattaa cgcaactaaa gaaactgcaa ttgataacat tgataaagct aaagactctg
    11701 gcgacattac ggtagcaatt gaagatgcag tcaaagcaag cgaaacagaa gttcttaaag
    11761 ccgctaagca agatgccttg aacaagcttg agaaagatgc agccaaagct aaagaagatg
    11821 ttgcagacaa ttcaaacttg actaaagaac aattagaaaa agcacttgaa gatattcaaa
    11881 acgatcttga caaggctaaa gctgctgtta atgaagctgc aaccccagat gcagttcaga
    11941 aagaagagga taagggagta gcggccatcg ccaaagatgt tcttgatgcc actaaacaaa
    12001 atgccttaaa ccagcttgag aaagatgcag ccagagccaa agaggatgtt gcaaaaaatc
    12061 caaacttaac taaagaacag ttagaaaaag cacttgaagg cattcaaaac gaccttgaca
    12121 aggctaaaac tgctattaac gaagccgcaa cttcagccgc agttcaggaa gaaatgaata
    12181 aaggtgtaac tgcacttgct aaagatgttc ttgacgcagc gaaacaagat gctaagaaca
    12241 agattgacaa agaagctgaa tcagctaaga aagcgattga caccaatcta aacttgactc
    12301 cagaagagaa ggaatcagct aagaaagtaa tagataccga tgctcaagcc gcgacagccg
    12361 ctattgataa agcgtcaact ccagatgcag ttcaagtaga agaggacaaa ggtgtagcag
    12421 ctatcaattt gattactgct aaggcagatg ctaaaggtgc cgttgctgct aagttggcag
    12481 atgaaatcaa aaagctcgaa gataagcaag cagaagcaga aaaagccatt gatgcgtcaa
    12541 ctatgactga ggaggagaaa gcaatcgcta agaaggctct tcaagatgtt gtagataaag
    12601 gaaaagcaga gcttgaagat gcagctaggg tagcaacaaa tgagattcat gaagctacta
    12661 ctacagaaaa agcgaaagcg gctgcacttg ctggcgaaaa gagcttgacc gatgcgggta
    12721 aaaaagctag agatgcagtt gaattggcta aggataaaga gttagctaag gaagcaatcc
    12781 ggacggaaga agaagaagct actaaagcag tagagaagct tgcagaagat acgcgcaaag
    12841 ctatcgagga aaatccaaac ttgtcagatg aagataagca agcggaaatt aaaaagctaa
    12901 ctgacgctgt ggcaaaaact ttagaaacca ttcgtgacaa tgcaactacg gctatgcaag
    12961 aagcagaaaa agcacaagcc ctagcagatc ttgaaaaagc taaagaaaca cagaaaattg
    13021 cagataaggc tgcgattgat aggttgacta tacttgtgaa agatggtgag cttgaagcta
    13081 ctaaacgaga tgttttaaat cagcttgaga aagatgcagc cagagctaaa gaggatattg
    13141 caaaaaatcc aaacttgact aaagaacaag tagacaaagc acttgaagat gttcaaaaag
    13201 atcttgacaa ggctaaaact gcaattaatg aagctgtaac ctcagacgca gttcaggcag
    13261 aaatggataa aggtgtagct gcacttgcta aagatgttct tgacgccgct aaacaagatg
    13321 ctaagaataa gattgctaaa gatgcagcag ctgctaaaga agcaattgat gccaatccga
    13381 acttatcaga tgcagagaag gaagcttcta agaaagcagt tgatgctgat gctaaagctg
    13441 cgacagatgc aattgatgct tcaacaagtc cagtcgaagc gcaatcggca gaggacaaag
    13501 gcgtaggttc aatcgcccaa gacgttcttg atgccgcgaa acaagatgcg aagaacaaga
    13561 ttgctaaaga agcagaatcc gctaagtcag ccattgactc caatccgaac ctgacagatg
    13621 cagctaagga agctgctaaa tctgaaattg ataaagctgt tgaggaagcg attgttttaa
    13681 tcaatggtgt tagaacttat caagagttgg aaaaaatcaa acttccaatg gcagctctaa
    13741 ttaaaccagc tgcgaaagta acaccagtgg ttgatccaaa taacttgact gaaaaagaaa
    13801 ttgctcgtat caagacattc cttaaagaga acaataacct cccagaagga acagagatta
    13861 atgtttctaa ggatgcttca gtgacaatta aatatccaga tggaactatt gatttgctat
    13921 caccagtaga agttgtgaag caggcagata aaactgctcc tacggtcgca aatgatggca
    13981 aaggtaatat tgtgattgta ccgtctgaaa aagctgttga gcttgttgtt tcatacgtag
    14041 ataacaatgg taagtcgcaa actgtagttg ttacgaaagg tacggatggt ttatggacag
    14101 caagtaatac agtggtgatt gtggaccctg tgactgggca agtaatcgtt ccaggttctg
    14161 ttattaagcc aggtacagtt gttacagcat actctaaaga cgaggttgga aatagttctg
    14221 attcagcaga agctgaagtt gtagcagtag acgaaaataa ttctgcagca ggagtgaaag
    14281 ttaaatcagt tactacaaat gctaataatg ttgagaagaa agctaagcaa ttaccgaata
    14341 ctggtgagga agcaaattca gcaacttcac tcggattagt agctcttgga ctcggattag
    14401 cacttcttgc agcaaagaga agaagagacg aagaagctta agataagctc ttcctcagaa
    14461 ctcttttggg agccgcaatt ttcctagaag atagtagtat gatactcttt catagcaagg
    14521 aaattccctc gctatgattg gcaggtatca gttattatct atcgaacccc caaaatccaa
    14581 agtcat
//
LOCUS       DASFQD010000056        14385 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.056, whole genome shotgun sequence.
ACCESSION   DASFQD010000056 DASFQD010000000
VERSION     DASFQD010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 14385)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14385)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14385
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.056"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..1044)
                     /locus_tag="U1021_001295"
     CDS             complement(<1..1044)
                     /locus_tag="U1021_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711836.1"
                     /translation="MNTKKWRTSLLIPGIVLFGTVALVNNVSAQEVKNTIISAKQPDG
                     RQATSKAVNVKIPAVVRLFGRELLENEFKFELREANSEKLIDTTQNTKEGQVSFKNLS
                     FNKPGEYWYTISEVKNELSGVEFDSKYIVAKITVEDRNNGQLQAMIEFIADDNVFNNF
                     YTPAPAAASLSIKKVLEGRTLNTGEFEFVLKNEKGDEIEKVSNQADGSVNFSALTFTK
                     EGTYTYTVSEVDGGLGDIIYDKSDIKATVTVKDNNHGQLVSTVTYENSDQIFENILNP
                     GKLIAPTTDSVITDNEVSKEAMTDKEKGNIEPPKEQITNEEKDNIEASEKQMPSIVND
                     MVVTPEKQMTNKEN"
     gene            1354..2352
                     /locus_tag="U1021_001296"
     CDS             1354..2352
                     /locus_tag="U1021_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004192896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM4711837.1"
                     /translation="MKVLLYLEGKTVLEKSGIGRALQHQMEALDMAGIPYTTDLLGDY
                     DVIHINTYGPRSWLLLHAAKRSGKKVIMHGHSTKEDFQNSFIGSNTLAPFVGKYLASM
                     YQKADFVITPSEYSKKLIQSYGVTTPIIAVSNGIDLDKYKKDERKEAIFREHFKIEEG
                     QPVVVCAGLYFRRKGIEDFVKVAEKMPHVRFIWLGSINKWLIPSYIRKIVEGDHPANV
                     EFPGYFKGAVFQGAMSGADAFFFPSYEETEGIVVLEALASHQHVVLRDIPVYDGWIDE
                     NVAELGHTVADFVDSIQKILDKQVDKREAGYQVAVSRSIDNVSHQLVDAYRQVLEM"
     gene            2353..3666
                     /locus_tag="U1021_001297"
     CDS             2353..3666
                     /locus_tag="U1021_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEM4711838.1"
                     /translation="MRIGLFTDTYFPQVSGVATSIRTLKTELEKLGHTVFIFTTTDED
                     VNRYEDWDIIRIPSVPFFAFKDRRVAYAGFTDALKIASRYKLDIIHTHTEFSLGILGK
                     MIAKELDIPVVHTYHTQYEDYVHYIAKGRIIRPGMVKYLVRAFLKDLDGVICPSEIVE
                     DLLMSYNVPISKRVIPTGIDLAKFDRPEIGKDETDELREQLGIASDETMLLSLSRISH
                     EKNIQAIVQAMPKILLENPKVKLVIVGGGPYTDDLQEMIAELNLDEHVQLTGMIAPSD
                     TALYYKAADFFISASTSETQGLTFLESLASGTPILAHSNPYLKNVITDKMFGTLFIRE
                     QELVDAVVEAIVATPPMNPYVLDKKLYEISSTNFGRKVFEYYLDLKISYDFRKEHTNQ
                     DSVAEALIKEAIYLPQKVVVKSTDTTAKILKKSVEQVKSIRNFFE"
     gene            3681..4055
                     /locus_tag="U1021_001298"
     CDS             3681..4055
                     /locus_tag="U1021_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711839.1"
                     /translation="MEKLRKESWKNLVLATLIILSMYAGIYLIAFHLISDTMLSKVLV
                     VGNILLYTPIVLFLTGLLYGFFHGFSPSLLALVLLLYPVTIFFFKEWIILYQIVYTLC
                     ALIGNGIGALLFYLRKKSKKNP"
     gene            4489..4674
                     /locus_tag="U1021_001299"
     CDS             4489..4674
                     /locus_tag="U1021_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG-like protein"
                     /protein_id="HEM4711840.1"
                     /translation="MNRLIMTKQGRYYDETPYTLEHKLAENIWWLIELADRLDIDIQK
                     EMETFLTQKEELLGIKK"
     gene            4824..6776
                     /gene="thrS"
                     /locus_tag="U1021_001300"
     CDS             4824..6776
                     /gene="thrS"
                     /locus_tag="U1021_001300"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEM4711841.1"
                     /translation="MLKITFPDGAVREYQAGVTTFEIAESISKFLAKKALAGKFNGKL
                     IDTTRAIEEDGTLEIVTPDHEDALDILRHSAAHLFAQAARRLFPDIKLGVGPAIQDGF
                     YYDTDNTAGQISNEDLPRIQEEMMKIVKENFPSERREVTKEEALEIFKNDPYKLELIH
                     EHSDDEGGLTIYTQGEYVDLCRGPHVPSTGRIQIFELLNVAGAYWRGKSENPMMQRVY
                     GTAWFDKKDLKAYLQMREEAKERDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRT
                     LERYITDKELASGYQHVYTPPLASVELYKTSGHWEHYSEDMFPTMDMGDGEEFVLRPM
                     NCPHHIQVYKNHVRSYRELPVRIAELGMMHRYEKSGALTGLQRVREMTLNDGHIFVTP
                     EQIQEEFKKALQLIIDVYADFNLNDYRFRLSYRDPEDKEKYYDNDEMWENAQRMLKGA
                     MDEMGVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFGLTYIGADG
                     EEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPTQVTMIPISVEAHLDYAWKVA
                     KELQDRGVRVHVDERNEKMQYKIRQSQTSKIPYQLIVGDKEMEDNAVNVRRYGSKATQ
                     TQSVTEFVDQILADIDRKSRPAETAE"
     gene            complement(6860..7654)
                     /locus_tag="U1021_001301"
     CDS             complement(6860..7654)
                     /locus_tag="U1021_001301"
                     /inference="COORDINATES: protein motif:HMM:NF013884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEM4711842.1"
                     /translation="MQIYAVFGSSIVISKILFSSYTVDKIQPSHLVSNFLLPDTSMWY
                     IWFLILMATATLILHRLQLTKPVSLICIGLFTLFATLFGGPLNISNLPIGLQHLTSLP
                     LFYFLGIYFAKKEIHKKMVRQTVFHSLAGLVTVFYLIYLQSYQTYPSQHLPFHTFLRY
                     ANGLAMTYLIVSIIITLERRLPSIIAWFGQYSLYFYLVHTYILTIITLFIKKYFIDFS
                     TPLLLLISFGLLLIINTLALFIVKRIPILDKVFQGKVISYPQKKHE"
     gene            complement(7618..7893)
                     /locus_tag="U1021_001302"
     CDS             complement(7618..7893)
                     /locus_tag="U1021_001302"
                     /inference="COORDINATES: protein motif:HMM:NF013884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEM4711843.1"
                     /translation="MKRLIYIDQLKGFGILAVLFLHTVGYIRNALPYTDIPLWRLEAW
                     LHSFLMPFFVFVSGFSFYHFYLKPKPRNNTYIYIDCCKYTQSLAVVL"
     gene            complement(8016..8675)
                     /locus_tag="U1021_001303"
     CDS             complement(8016..8675)
                     /locus_tag="U1021_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM4711844.1"
                     /translation="MNYVLELLKPSTFQLLWSGLKLTLYISSISVVLSVLFGMILAIM
                     RNGKNPIFKWIATIYIEFVRNVPNLLWIFTVFLVFQMKSTPAGITAFTIFTTAAMAEI
                     IRGGLNAIGPGQTEAGLSQGFTPVQIMVYIIMPQAIRKMLPAIISQIVTVIKDTSFLY
                     SVIALQELFGSSQILMGRYFEAEQVFALYLMVALIYFSINFAISSLSRYVAKSWASSI
                     E"
     gene            complement(8690..9388)
                     /locus_tag="U1021_001304"
     CDS             complement(8690..9388)
                     /locus_tag="U1021_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM4711845.1"
                     /translation="MTVLTTSPYAWENWVSYFKDFPTFFQGFLFTLAISVGAFIMAMF
                     LGIVFGSLSSSKNKVLKIIARVYVEYYQNTPLLVQFMIVYYGLPLISNYVLMPSIYWT
                     AVICVGLYHGAYIAEVIRTGIEAVPTGQTEAALSQGFTQAETMRIIILPQAIPTILPP
                     LTNQVVNLIKNTATVAIISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASW
                     GRRIEEKNKSAFSH"
     gene            complement(9403..10242)
                     /locus_tag="U1021_001305"
     CDS             complement(9403..10242)
                     /locus_tag="U1021_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEM4711846.1"
                     /translation="MDKKKINIFFAIRLLVFGLILLVFAKQPVAQTETPASITNSDQV
                     QAIIDRGVLRVGVKQDVPNFGYKNPDTGEFEGMEIDIARKIADELGVDIEFTPVTAQT
                     RGPLLDNGQVDMVIATFTITEERKLLYNFTTPYYTDAVGFLVNKDSGIKTFTDLDGKT
                     IGVAQGSITRTLISELADKYGISVNFAELGSYPELSVSLRAHRTDAFSVDRSILSGYI
                     SSKSELMDFSFSASDYGIVTKLSNKDLNDYLNSLVEKWTADGSLQSIYDANGLKPVTE
                     TDE"
     gene            complement(10253..11014)
                     /locus_tag="U1021_001306"
     CDS             complement(10253..11014)
                     /locus_tag="U1021_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM4711847.1"
                     /translation="MALVEFKDVNKYYGDYHALRNINLEFEPGQVVVLLGPSGSGKST
                     LIRTINGLEAIDEGTLIVNGHDISSTSIKELVSLRKEVGMVFQHFNLYPHKTVLENVT
                     LAPIKVLGIDKATAEKTAQKYLEFVNLWDRKDSYPAMLSGGQKQRVAIARGLAMRPEL
                     LLFDEPTSALDPETIGDVLAVMQKLARDGMNMIVVTHEMGFAREVADRIIFMAEGEVL
                     VDTTDVNGFFDNPTEPRAQQFLSKIINHESDKVKL"
     gene            11208..11912
                     /locus_tag="U1021_001307"
     CDS             11208..11912
                     /locus_tag="U1021_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005589489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4711848.1"
                     /translation="MKKILIVDDEKPISDIIKFNMTREGYEVVTAFDGREALEVFEAE
                     FPDIVILDLMLPELDGLEVARTIRKTSNVPILMLSAKDSEFDKVIGLEIGADDYVTKP
                     FSNRELQARVKALLRRSELAETQTNIESTGTPELVIGDLLILPDAFVAKKHGKELELT
                     HREFELLHHLAKHLGQVMTREHLLETVWGYDYFGDVRTVDVTIRRLREKIEDTPSRPE
                     YILTRRGVGYFIKGND"
     gene            11905..13254
                     /gene="vicK"
                     /locus_tag="U1021_001308"
     CDS             11905..13254
                     /gene="vicK"
                     /locus_tag="U1021_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall metabolism sensor histidine kinase
                     VicK"
                     /protein_id="HEM4711849.1"
                     /translation="MINQLRYLMTTAEFWFVVILIGFLIALTVLLIENYRDNKQIKQL
                     NQKVNALIEGNYADVLDMRGSPEITDMANSLNDLSEVIRLTHDNLEQEKTRLTSILSY
                     MSDGVIATDRIGRIIMINDMAQKQLGLSNPKQEQYHLLEVLDLSDRYTLRDLLAQTPE
                     IVIEHTNENEEFLTLRANFATIRSESGLISGLVVVLHDMTEQAKEERERRLFVSNVSH
                     ELRTPLTSVKSYLEALDEGALTESVAPSFVKVSLDETNRMMRMITDLLSLSRIDNQVG
                     QIDVELINFTAFMTFILNRFDQMKNADSDKVYTIVRDYQISPIWVEIDTDKMTQVLDN
                     ILNNAIKYSPDGGTITFSMKTTDSQLIVSVSDEGLGIPKADLPRIFDRFYRVDKARSR
                     AQGGTGLGLAIAKEIVKQHKGFIWAKSEYGHGSTFTIVLPYSKDIALDEWDDSDEEE"
     gene            13261..14064
                     /locus_tag="U1021_001309"
     CDS             13261..14064
                     /locus_tag="U1021_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016465920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM4711850.1"
                     /translation="MIGKGFNYSILASGSSGNCFYLETDKKKILVDAGLSGKKITSLL
                     AEIDRKPEDIDAILVTHEHSDHIHGIGVLARKYGMDIYANELTWQAMESKLGKIDVAQ
                     KHIFELGAMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIV
                     ENADAYLIESNHDIEILRSGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIY
                     LGHLSKENNIKELAHMTMVNQLAQADLGVGVDFQVYDTSPDTATPLTKI"
BASE COUNT         4246 a         2628 c         3265 g         4246 t
ORIGIN      
        1 gttctcttta ttagtcattt gcttttcagg tgttacgacc atgtcgttca caatgcttgg
       61 catctgtttt tcagaggctt caatattatc cttctcttca ttagttattt gctctttagg
      121 gggttcgata tttcccttct ctttatcggt cattgcttcc ttagagactt cattatcagt
      181 aataacgcta tccgtggttg gcgctattaa cttcccagga ttcaaaatat tctcgaagat
      241 ttgatcgcta ttttcataag tcactgttga gactagttgt ccgtgattgt tatctttcac
      301 agtgacagtg gccttaatat ctgatttgtc atagataata tcgccaagtc caccatcaac
      361 ttctgaaaca gtgtaggtat aggttccctc ttttgtaaat gttagggcac taaagtttac
      421 agaaccatct gcttgattgc ttaccttttc gatttcatcg cctttttcat tttttaaaac
      481 aaattcgaat tcaccggtgt ttaaggtacg tccctcgagg acttttttaa tcgaaagact
      541 agcagcagct ggagcaggtg tatagaaatt gttaaagaca ttgtcatcag caataaattc
      601 aatcattgcc tgtaattgtc cgttgtttcg atcttctaca gttatttttg ctacaatata
      661 tttcgaatca aactcaacac cactaagctc attttttact tctgaaattg tataccaata
      721 ttcgccgggc ttattgaatg atagattttt aaaactaact tgaccctctt ttgtattttg
      781 agttgtatca ataagtttct cactattcgc ttctctaagc tcaaatttaa attcattttc
      841 tagaagctca cgaccaaata gtcgtactac tgctggtatt ttgacattaa ccgcctttga
      901 agtagcctgt ctcccatcag gttgttttgc gctgatgatg gtatttttta cttcttgtgc
      961 cgatacatta ttcactagag caacagttcc aaataatact attcctggta ttaggagcga
     1021 tgttctccat ttcttagtat tcattatcct ttttcctttc tcaaagcatg atttatgtag
     1081 ctaatctgtg tcgttataac atgcaaattt tacatctaaa gtcctcaata aattttgaaa
     1141 gcttagtgcc agaatgtgca ccattcgtaa attataacat cttctaaaaa aacattcaag
     1201 ctgtccttct gcttttaaaa tctgttttat atgtttttta tgtaatcata tatttgggat
     1261 tatattcttt agtattggct ttaattgata caaaattcgt gtagaataca gttaaaatat
     1321 gaaaaaaatg taaaaaaggg ctataatggt attatgaaag tactattgta tttagaaggt
     1381 aaaactgttt tagagaaatc aggaattggc cgggcacttc aacaccagat ggaagcgcta
     1441 gatatggcag gcattcctta tacaacagac ctgttgggag attacgatgt cattcatatc
     1501 aatacctatg gtccacgctc ctggttattg ctacatgcag ccaaacggag tggaaaaaag
     1561 gtaatcatgc atggacattc cacgaaggaa gattttcaaa attcctttat cggttcgaat
     1621 accctagctc cttttgtagg gaaatatcta gcaagcatgt accaaaaggc agactttgtc
     1681 atcactcctt cagagtattc aaaaaaactc atccagtctt acggtgtgac aacgccaatt
     1741 atagccgttt cgaatggtat tgatttagat aaatataaga aggatgaacg caaggaagca
     1801 atctttcgag agcattttaa aattgaagaa gggcagccgg ttgttgtctg tgcaggactc
     1861 tacttccgac gtaaaggaat tgaagacttt gtcaaggtag ccgaaaagat gccgcatgtc
     1921 cgcttcattt ggctcggttc aatcaataag tggctgattc cgtcatatat tagaaaaatt
     1981 gttgagggag atcatccagc gaatgtcgag tttccaggtt attttaaagg tgctgttttt
     2041 caaggtgcaa tgagcggagc ggatgccttt ttcttcccat cgtatgagga aacagaaggg
     2101 attgttgttc tggaagctct tgctagtcat cagcatgttg ttctaagaga tattccagtt
     2161 tacgatggtt ggattgacga aaacgttgcc gaattgggac atacagtggc tgattttgtt
     2221 gattctattc agaaaatctt agacaagcag gttgataaac gtgaggcggg ctaccaggtt
     2281 gcggttagtc gctcgattga caatgtttcc caccaattgg tggatgccta tcgacaagta
     2341 ttggagatgt aaatgcggat tggattgttt acggatacct attttccaca ggtttcagga
     2401 gtcgcgactt cgattcggac tcttaagaca gagttggaga aattgggaca tacggtattt
     2461 atttttacga cgacagatga ggatgtgaat cgctacgaag attgggacat tatccgaatt
     2521 cctagcgtac ctttttttgc ctttaaagat cgtcgagtgg cctacgcagg ttttacagat
     2581 gctttaaaga ttgcaagtcg ctataaacta gatattattc atactcatac agaattttct
     2641 ttggggattt tggggaaaat gattgccaag gaactagata ttccagtggt acatacttat
     2701 cacacccagt atgaagacta cgtacactat attgccaagg ggaggattat tcgtcccggg
     2761 atggttaaat atttagtacg ggcattttta aaagatttag atggggtaat ttgtcccagt
     2821 gagattgttg aagatctttt aatgagttac aacgttccga tttctaaacg agtaattccg
     2881 acaggaattg acttggcaaa gtttgataga ccagaaattg gaaaggatga aacagatgag
     2941 ttgcgggaac aactaggaat tgctagtgat gaaacgatgt tgttaagtct gtctaggatt
     3001 tctcacgaga agaatatcca agcaatcgtt caggcaatgc caaaaatttt gctagaaaat
     3061 ccaaaggtga agttggtcat tgtcggaggt ggaccttata cagatgatct tcaggaaatg
     3121 atagcggagc ttaatctaga tgaacacgtc cagttgacgg gaatgattgc accaagtgat
     3181 acagcacttt attataaagc tgcggatttc tttatttctg cttcgaccag tgaaacgcag
     3241 ggactaactt tcttagaaag cttagcttct ggaactccta ttttggcaca tagcaatccc
     3301 tacttaaaaa acgttataac agataagatg tttgggactc tcttcattcg agaacaggag
     3361 ttggtagatg ccgtcgttga ggcgattgtt gctacgccac caatgaatcc gtatgtgctt
     3421 gataagaagc tctatgagat ttcttctacg aattttgggc gcaaggtttt tgagtattat
     3481 ctagatttga agatttcgta tgattttaga aaagaacata ctaatcaaga tagcgtagca
     3541 gaagctttga taaaagaggc tatttaccta ccgcaaaaag tagtagttaa atcaacagac
     3601 acgacagcaa aaatattgaa aaaatcagtc gaacaagtaa aatcaattcg aaatttcttt
     3661 gaataatttg gaggtttcaa atggaaaagc ttcggaaaga gagttggaag aatctggttt
     3721 tggcaactct tattattctg tccatgtatg caggtattta tctgattgcc tttcatctga
     3781 ttagtgacac catgctttct aaggtgctgg tggtcgggaa tatattgctc tatactccca
     3841 ttgtactatt cctaacaggt cttctttatg gattttttca cggcttttct cctagccttc
     3901 ttgccttagt tttattgctt tatcctgtaa ccatcttttt ctttaaggaa tggattattc
     3961 tctatcagat tgtctacacc ttatgtgctc tgattggaaa tgggatagga gctctgctat
     4021 tttacctaag aaagaaaagt aagaaaaatc cttgaaaaat caggaaatcc tgttataata
     4081 gcttttagag acttatcaat tctaggaaat ctttgagaga gtgtgcggtt ggtgtaagca
     4141 catagaggat aggattgaca ctactcggta tgattttatg caaacataaa agggtggttc
     4201 ccttatcgcc aatctgaggt agtcaggctt tttagcgtga ctgcgaatga aggtggaacc
     4261 acgttacgac gtccttttgc gagggcgtcg tattttcttt tgaggaggaa tgatgctacc
     4321 tgatgattta ttaaaacggt gtcaagatgt gcgtcatgct tacagagagt tggaactcaa
     4381 gcaccacgac aaagagtggt ccattgagga gtgaaacagt ctggggatag actgtttcag
     4441 ctcaacaact taaaataaag atttgttgag ttctttctca ctcccaacat gaaccgcctg
     4501 attatgacca agcaggggcg ttactatgat gaaacgccct ataccttgga gcataaattg
     4561 gctgaaaata tctggtggtt gattgaactg gctgatcgcc tggatattga tattcaaaaa
     4621 gaaatggaaa cctttttaac tcaaaaagaa gagttattgg ggattaaaaa ataaaaatag
     4681 aaaggactag ggtctccgta tttggttgaa ctgaatacgg gctacggact gggccaaaaa
     4741 gataaacgag aactagacgc ttgcgtcgtc gttctgtttc ctattttggc tgtgtccgct
     4801 taacgccctt tatatcttat attatgctta aaattacttt cccagatggt gctgttcgtg
     4861 agtaccaggc tggtgtgaca acttttgaaa ttgcggagag catcagcaag tttttggcga
     4921 aaaaggctct tgcaggtaag ttcaatggta aattgattga caccactcgt gctattgaag
     4981 aggacggtac gcttgaaatc gtaacgcctg accacgagga tgccttggac atcttgcgtc
     5041 actcagcggc gcacttgttt gcccaagcgg ctcgtcgtct cttcccagac atcaagttgg
     5101 gggttggtcc agctattcag gacggttttt attacgatac ggacaatacg gctggtcaga
     5161 tttcaaatga agatttgcca cgcattcagg aagaaatgat gaagattgtc aaggaaaact
     5221 tcccttctga acgtcgtgag gtgactaagg aagaggctct tgaaattttc aaaaacgatc
     5281 catacaagtt ggaattgatt cacgagcact ctgatgacga gggcggtttg accatctata
     5341 cccagggtga atacgttgac ctctgtcgtg gtccacacgt tccgtcaaca ggccgtatcc
     5401 agatttttga attgctcaac gtggcaggtg cttactggcg tggtaagagc gaaaatccca
     5461 tgatgcaacg ggtctatggt acagcttggt ttgacaagaa agacctcaag gcttaccttc
     5521 aaatgcgtga ggaagccaaa gagcgtgacc accgtaaact tggtaaggaa ttggatctct
     5581 tcatgatcag ccaagaagtt ggtcaaggct tgccattctg gttgccaaat ggagcgacca
     5641 tccgtcgtac cttggagcgt tacatcacag ataaagagtt ggcttcaggt taccagcacg
     5701 tttatacgcc accgttggct tctgtcgagc tctacaagac ttcaggtcac tgggagcatt
     5761 attcagaaga tatgttccca actatggaca tgggtgacgg tgaggagttt gtgcttcgtc
     5821 cgatgaactg tccgcaccac attcaagttt acaaaaacca tgtgcgttct taccgtgaat
     5881 tgccagtgcg tatcgccgag cttggtatga tgcaccgcta tgaaaaatct ggcgcattga
     5941 ctggtttgca acgggtgcgt gagatgaccc tcaacgacgg tcatatcttt gtcacacctg
     6001 agcaaatcca agaagagttc aaaaaagctc tccagttgat catcgatgtg tacgcagatt
     6061 tcaacctaaa cgactatcgt ttccgcctgt cttatcgtga tccagaggac aaagagaagt
     6121 actacgacaa cgatgagatg tgggaaaatg cccagcgtat gctgaagggg gctatggatg
     6181 aaatgggcgt agactacttc gaggctgagg gtgaagctgc cttctacggt ccgaaattgg
     6241 atatccaggt gaaaacggcc cttggtaacg aggaaaccct gtcaaccatt cagttggact
     6301 tcctcttgcc agaacgcttt ggtctgacct acattggtgc tgacggtgag gagcaccgcc
     6361 cagtcatgat tcaccgtggt gttatttcga caatggaacg cttcactgcc atcttgattg
     6421 aaacctacaa gggtgctttc ccaacttggt tggctccaac ccaagtgact atgattccaa
     6481 tctctgtgga agctcacttg gattacgctt ggaaggttgc caaggaattg caagaccgtg
     6541 gcgttcgcgt acacgtggat gaacggaacg agaagatgca atacaagatc cgtcagagcc
     6601 agaccagcaa gattccatat cagctcatcg tcggtgacaa ggaaatggag gacaatgcag
     6661 tcaacgttcg tcgctacgga agcaaggcaa cacaaactca atctgtcaca gaatttgtgg
     6721 accagatcct agcagatatt gaccgcaagt cacgtccagc tgaaacagct gaataataat
     6781 tataaggaga agtccgaaag ggcttctttt ttgacagtaa aaactcccaa gcgattggct
     6841 gggagtgcag taccacatgc tattcgtgct tcttttgagg gtaggaaatc accttccctt
     6901 gaaatacttt atccagtata ggaatccttt taacgataaa caaggctagg gtgttgatga
     6961 taagaagtaa tccaaaactt atgagcagca gcagaggtgt agaaaaatct ataaaatatt
     7021 tctttatgaa aagagtaata attgtcagga tgtaggtatg taccagatag aagtaaagtg
     7081 aatactggcc aaaccaagct ataatagagg gtaatcttct ttccagagtg attatgatag
     7141 aaacgatcag gtaggtcata gctagtccgt ttgcatatcg taggaaggta tgaaatggca
     7201 ggtgctgact tgggtaggtt tggtaggact gtaaatagat gagatagaag acggtgacca
     7261 gaccggctaa actgtgaaaa acggtctgtc taaccatttt cttgtgaatt tctttcttgg
     7321 caaaataaat acctaaaaaa taaaatagtg gtaaagaagt caggtgttgt aacccgattg
     7381 gtaagttgct aatatttaag ggaccaccaa atagtgtagc gaatagtgta aaaagaccaa
     7441 tgcaaatcag tgaaactggt tttgttagtt gcaatcgatg gaggataaga gttgcggtag
     7501 ccataaggat taaaaaccaa atataccaca tagatgtatc tggcaggaga aaattagaaa
     7561 caaggtgact aggttgtatt ttatcaacag tgtaacttga aaagaggatt ttgctaatta
     7621 caatactact gccaaagact gcgtatattt gcaacagtcg atatatatat aagtattatt
     7681 tctaggtttt ggttttaggt aaaaatgata gaaactaaag ccactgacaa atacaaaaaa
     7741 tggcataagg aaagagtgta gccaagcttc cagtcgccaa agagggatat cggtatatgg
     7801 aagagcgttt cggatgtaac cgactgtatg cagaaataag acagctaaaa ttccaaaacc
     7861 tttcagctgg tcaatataga tgagtcgttt cataagtttc tcctttattt aactctaaac
     7921 tatttgggaa cagaggcatt tccaaaatgg tttgagtaca ttttctttga ttatatcata
     7981 aaaccagctt tctcgagaaa actggttcag attgtttatt caatactgct cgcccaagac
     8041 ttagccacat aacgtgacag gcttgaaata gcaaagttga tactgaagta aatcaaggct
     8101 accatgagat agagtgcaaa aacttgttct gcctcaaagt agcgtcccat gaggatttga
     8161 ctagagccga agagttcttg cagggcgata acggagtata ggaaactagt gtccttgata
     8221 accgtcacaa tctgcgagat gatggctggc agcatcttgc gaatggcctg cggcatgatg
     8281 atatagacca tgatttgcac tggggtaaaa ccctgtgata agccagcttc ggtctggccc
     8341 ggtccgatgg cgtttagacc gccacggata atctcggcca tggctgccgt ggtaaaaata
     8401 gtaaaagcag taataccagc gggcgttgac ttcatttgga agactaagaa aacggtgaaa
     8461 atccagagca agtttggcac gttacgcaca aattcgatat agatggttgc aatccacttg
     8521 aaaattggat tttttccatt tcgcatgatg gctaaaatca tgccaaagag aactgataga
     8581 accaccgaaa tgctagagat ataaagggtt aacttcaaac cactccacaa gagttggaag
     8641 gttgaaggtt tgagtaattc taaaacataa ttcatcgttc aacctccttt tagtgtgaaa
     8701 aggctgactt attcttttct tcaatgcgac gtccccagct tgcaacaggg aagcacatga
     8761 tgaagtaaag gaaagcagcg ccagcaaagg ctgggatgta gttggcattc atggcagacc
     8821 aagattttgt cataaacata atatcagctc cagaaataat ggcaacagta gccgtattct
     8881 taattaagtt tactacttgg ttggtcaaag gtggaagaat ggtcggaatg gcctgtggta
     8941 aaatgatgat tcgcatggtt tcagcctggg taaatccttg tgagagtgcg gcttcagttt
     9001 gcccagtagg cacagcctca atccctgtac gaatgacctc tgcgatatag gcaccgtgat
     9061 agagtccgac gcagataaca gctgtccagt agatggacgg catgagaaca taatttgaaa
     9121 tcagtggaag tccataataa acaatcatga actgaactaa aagcggcgtg ttctgatagt
     9181 attcaacata gacacgtgcg atgattttta aaactttatt tttacttgaa gagagactac
     9241 caaagacaat tcctaaaaac atggccatga taaaggcacc gacagaaatg gctaaggtaa
     9301 agagaaaacc ttggaaaaag gttggaaaat ccttgaaata actgacccaa ttctcccaag
     9361 cgtaaggact agttgttaaa actgtcatat tgtttcacct ttctattcgt cagtttctgt
     9421 gactggtttg agaccattgg catcatagat gctttgtagg ctaccatcgg cagtccattt
     9481 ttctacgaga ctatttaagt agtcgttaag gtctttgtta gataatttag taacaattcc
     9541 atagtcagaa gctgagaagc taaagtccat gagttcagat ttcgaactga tatacccaga
     9601 aaggatagat cggtctactg aaaatgcgtc tgtacggtga gcacgtagcg agacagagag
     9661 ttctggataa gaaccaagct ctgcaaaatt gacagagata ccatatttgt ctgctagttc
     9721 agagatgagg gtacgtgtaa tggaaccctg agctacaccg attgtctttc catccaggtc
     9781 ggtaaatgtc ttaattccac tatccttatt gaccaagaag ccaacggcat ctgtgtagta
     9841 aggagttgtg aaattgtaga ggagtttacg ttcctcagtg atggtgaagg ttgcgatgac
     9901 catatccact tgaccgttat ctaagagtgg tcctcgggtt tgtgccgtaa cgggagtaaa
     9961 ttcgatatct acacctaatt catctgcaat ttttcgagca atgtcaatct ccattccctc
    10021 gaattcacca gtatcagggt tcttgtagcc aaagtttggg acgtcctgtt tcactccgac
    10081 gcggagaacg cctctatcga taatagcttg aacttgatca ctattggtaa tggatgcggg
    10141 tgtttctgtt tgagctactg gttgttttgc gaaaacgaga agaataagtc caaagaccaa
    10201 taatctaatt gcaaagaaaa tgttgatttt tttcttatcc atagacttcc tcctagagtt
    10261 ttactttgtc agattcgtgg ttgataatct tgctgaggaa ttgttgggca cgaggctctg
    10321 tcggattgtc aaagaagcca tttacatctg ttgtatcaac taaaacttct ccctcagcca
    10381 tgaagatgat gcgatcagct acttcacggg caaagcccat ttcgtgtgtt acgacaatca
    10441 tgttcatccc gtcacgtgcc aatttttgca taactgcaag tacatctccg atcgtttcag
    10501 ggtccaaggc agatgttggt tcatcgaaga gtagaagctc aggtctcata gctaagccgc
    10561 gagcgatggc gacacgttgt ttttggcctc cggatagcat agcagggtag gaatctttcc
    10621 gatcccagag gttaacaaac tcaagatatt tttgagcggt tttttcagct gtagccttat
    10681 cgattcccaa aaccttaatc ggtgccaagg taacattttc taacacagtt ttgtgtgggt
    10741 aaaggttgaa atgctggaaa accatgccaa cttctttgcg aagtgatacg agctctttga
    10801 tagaagtaga ggaaatatca tgtccattga cgatgagcgt tccttcatca attgcctcta
    10861 aaccgttaat cgtgcgaatg agagtagatt ttccggatcc ggaaggtcca aggagaacaa
    10921 caacctgtcc aggttcgaat tccaagttga tattgcgtag ggcgtggtag tcgccatagt
    10981 atttgttgac atctttaaat tctactaaag ccataaaatt ctccttgcat agtgttttta
    11041 aggtattccc atcttagcat tgcctatata caatgtcaag taaattctga caatttaatg
    11101 tatagtatgt tataaaacgt gacatagctg tgtcaggtgg ttttgaaata tgaatttttt
    11161 aggtaagtct gatataatag aagaaataaa gcaaaggtaa gatactaatg aaaaaaatat
    11221 taattgtaga tgatgaaaaa ccaatctcag atattattaa gtttaatatg acgcgtgagg
    11281 gatatgaagt tgtgacagct ttcgatggac gtgaagcctt ggaagtattt gaggctgagt
    11341 ttcctgacat tgtcattttg gacttgatgt tgccagaatt ggacggacta gaggttgctc
    11401 gaacgattcg taagaccagc aatgttccaa tcttgatgtt atctgctaaa gatagcgaat
    11461 ttgataaggt tatcgggctt gaaatcgggg cggatgatta tgtgaccaaa cccttctcta
    11521 atcgcgaatt gcaggcgcgt gttaaggctc ttcttcgtcg tagtgaattg gcagagacgc
    11581 agacaaatat tgagtcaaca ggaactccag agttggtgat tggcgatttg ctcattctgc
    11641 ctgatgcgtt tgttgctaag aagcatggta aagagctgga gctgacccat cgtgagtttg
    11701 aattgctcca ccatctggcc aaacacttag gtcaggttat gactcgagaa catctattgg
    11761 aaacagtttg gggttatgat tactttggtg atgtccgcac ggtggatgta acgattcgtc
    11821 gtctgcgtga gaagattgaa gatacaccaa gccgaccaga atacattctt actcgtcgcg
    11881 gagtgggata ttttataaaa ggaaatgatt aatcaattac gttatttaat gaccacggca
    11941 gaattttggt ttgttgtcat tttgattggc tttctaattg ctctgacggt ccttttgatt
    12001 gaaaactatc gggataataa gcaaattaaa caactcaatc aaaaagtcaa tgccttaatt
    12061 gaggggaatt atgcagatgt gttagacatg aggggaagtc ctgaaatcac agatatggct
    12121 aattccctca atgatttgtc cgaggtcatc cgcttaactc atgataattt agaacaagaa
    12181 aagacgcgtc tgacgtccat cctgtcctat atgagtgacg gtgttattgc tacagaccgt
    12241 atcggacgga ttatcatgat taacgatatg gcccagaaac agttggggtt atctaaccca
    12301 aagcaggagc agtatcacct gctagaggtt ttagatttat cagaccgtta tacattgaga
    12361 gatttgttgg ctcagacacc tgagattgtg attgaacaca ccaatgaaaa cgaagaattt
    12421 ttgactttac gcgctaattt tgccacgatt cgtagtgaga gtggtctgat ttctggcctg
    12481 gttgtcgtct tgcatgatat gaccgagcaa gccaaggaag aacgggaacg taggctgttt
    12541 gtatcaaatg tgagtcatga attgcgtacg ccattgactt ccgtcaaatc ctatctagag
    12601 gctctggatg agggagcgct gacggagtct gttgcaccga gttttgttaa ggtatcctta
    12661 gatgagacca accgcatgat gcggatgatt acagacctcc taagtttatc gcgtattgat
    12721 aatcaagttg gtcagataga tgtcgaactg ataaacttta ctgcttttat gacctttatt
    12781 cttaaccgtt ttgaccaaat gaaaaatgct gattcagata aggtctatac gattgttcgt
    12841 gactatcaaa tcagtcctat ttgggttgag attgatacag ataagatgac tcaggttttg
    12901 gataatatct taaataatgc cattaaatat tcgccagatg gcgggacaat taccttcagc
    12961 atgaagacca cagatagcca gttgattgta tccgtatcag acgaaggtct ggggattccg
    13021 aaagcagatt tacctagaat ttttgaccga ttttatcgcg tagacaaggc acgatcacgt
    13081 gcccaaggtg gtacaggtct tggtttagct attgcaaaag aaatcgtgaa acaacataag
    13141 ggctttatct gggctaaaag cgaatatggt catggctcaa cgtttacaat tgtcttgccg
    13201 tacagcaagg acatcgcact agatgagtgg gatgattcag atgaggaaga ataggagaat
    13261 atgatcggaa aaggttttaa ttatagtatt ttagcttcgg ggtccagcgg gaattgtttt
    13321 tacctagaaa cagataaaaa gaaaatctta gtggatgctg gcttatcagg gaaaaagatt
    13381 accagtcttt tggcggaaat tgatcgaaag cctgaggata ttgatgctat cctggtaacg
    13441 catgaacata gcgatcacat ccatggtatc ggtgttttag cacgtaagta tgggatggac
    13501 atttatgcca atgaattgac ctggcaggct atggagagca aattgggcaa gattgatgtg
    13561 gctcaaaaac atatctttga attgggtgct atgaagactt ttggcgacct agatattgag
    13621 tcctttggag ttagccatga tgctgcatgt ccgcaatttt accgttttat gaaggatgac
    13681 aaatcctttg ttatgttgac ggatacaggc tatgtcagtg accgcatggt tggaattgta
    13741 gaaaatgccg atgcttattt gattgaatcc aaccatgata ttgaaatttt gcgctcgggt
    13801 tcttactctt ggaacctcaa acaacggatt ttgtcagata agggtcatct ttgtaatgaa
    13861 gatggagctg atgccatgat tcgctcgttg ggaaatcgga ccaaaaagat ttacctaggg
    13921 catttgtcaa aggaaaacaa tatcaaggaa ttggctcaca tgaccatggt taatcagttg
    13981 gcgcaggctg atttaggagt tggagtggat ttccaagtct atgacacatc gccagataca
    14041 gcgactccct tgaccaagat ttgacaattg atacaaacta agttatactg aaattactaa
    14101 ttatacgagg tgaagttaca tgaataatta agctacttat tagtcgttct taaaacttgt
    14161 agtgaggtta tatgaaccga ttatacaagg gataagactg ctcataaggg cttagtattc
    14221 atgtgacttt ttccataggg aaaggtcatg ttttgcatgg cttttttctt gttcattgag
    14281 cagaataggg gccctttttg tgaagaaaag aggtctatat ggaagtaata aaatgtattc
    14341 gattagagaa ggaatttgcg ggatgtagag gctgggcaaa aagct
//
LOCUS       DASFQD010000057        14375 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.057, whole genome shotgun sequence.
ACCESSION   DASFQD010000057 DASFQD010000000
VERSION     DASFQD010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 14375)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14375)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14375
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.057"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            91..624
                     /locus_tag="U1021_001310"
     CDS             91..624
                     /locus_tag="U1021_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000775318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF402 domain-containing protein"
                     /protein_id="HEM4711851.1"
                     /translation="MKLPKEGDFITIQSYKHDGEIHRTWRDTMVLKTTENAIIGVNNH
                     TLVTENDGRRWVTREPAIVYFHKKYWFNIIAMIRENGVSYYCNLASPYVLDNEALKYI
                     DYDLDVKVFADGEKRLLDVDEYERHRKAMKYSDDIDFILKENVKILVDWINNQRGPFS
                     PAYVNIWYKRYLELRSR"
     gene            682..999
                     /locus_tag="U1021_001311"
     CDS             682..999
                     /locus_tag="U1021_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF960 domain-containing protein"
                     /protein_id="HEM4711852.1"
                     /translation="MAFEQTNGRYASFGVVTSLPGEVIDSFWYVIDHYLKGVIPLKSV
                     IHFSIKNRRGKITLVFSQEGYKNVLAVDLSSRFDPFYPSTILVMDKQGKETITLPDEV
                     TLL"
     gene            1099..1830
                     /locus_tag="U1021_001312"
     CDS             1099..1830
                     /locus_tag="U1021_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM4711853.1"
                     /translation="MVSQTVEKPLYLQLVDELEVAIRERMAPNDKLFSERELTQVYGV
                     SRITVRLALQELEKRGLVYKKHGKGTYVSEISDTAVDLSQAYSFTEQMKKIGKVPRTS
                     ILSFELVKASDYIAQHLQLSQGEEVFVVERLRLADEIPMMLERTYVPASLFPGLAAQR
                     MKSTPLYEIFSEDYHQVIRLAEEEFYASIALDNEAKILGIPSNSPVLHLVRKTYNDKN
                     RIIEFTFSIARADQFRYKITHQRGY"
     gene            complement(1970..2680)
                     /locus_tag="U1021_001313"
     CDS             complement(1970..2680)
                     /locus_tag="U1021_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM4711854.1"
                     /translation="MKVPKYQLIQNDLRQQIVSGKFENGDKFYTESELTKLFNVSSIT
                     VIRAVNELVKDGYLVRQQGKGTFVSRSRKGRLVEFSDIEIFPMDKDKVTVLSCEKGNK
                     PDILEKLNLDKNEFYYKIVRVRAAEDTPYIFHNSYIPQRYIQNPDAPLEHYQSIYQRF
                     KLDYNIHMSEEPFVETNEIVSPCPKEVATHLKLKATEPAVLQNKTTTNSTSGEVMEYT
                     ETYKHWKYYKFEITANHR"
     gene            2887..4659
                     /locus_tag="U1021_001314"
     CDS             2887..4659
                     /locus_tag="U1021_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase"
                     /protein_id="HEM4711855.1"
                     /translation="MKEFYIGDQFYLDGEPFKILSGAIHYFRVHPDDWYHSLYNLKAL
                     GFNTVETYVPWNMHEPRKGEFCYEGILDIERFLKLAQELGLYAIVRPSPYICAEWEWG
                     GLPAWLMKEELRVRSSDSVYLQHLDEYYASLIPKLAKLQLAQGGNVLMFQVENEYGSY
                     GEEKEYLRSVAGLMRKHGLTAPLFTSDGSWRATLRAGTLIEDDVFVTGNFGSKARENF
                     ANMTAFFNEHQKNWPLMCMEFWDGWFNRWGDEIIRREPEEMVDSVMECIELGSVNLYM
                     FHGGTNFGFMNGCSARGQIDLPQVTSYDYDAILDEAGNPTKKFYILQQRLKEVYPELE
                     YAEPLVKEAKAFSDVSLHDKVSLFVTLENVSDCVKGFYPKNMEELDQSTGYILYRTEL
                     ERDKTEAERFRVVDARDRIQIYADGKFVATQYQTEIGDDVELDFKDDKLTLDILVENM
                     GRVNYGHKLTAPTQSKGLGRGAMADLHFIGHWETYPLHLESVEDLDFSKGWEEGQAAF
                     YRYQFELDELADTYLDMTGFGKGVVFVNNVNIGRFWEKGPILYLYIPKGYLKKGENEI
                     VVFETEGKYREKISFSQEPVYKEV"
     gene            4715..5200
                     /locus_tag="U1021_001315"
     CDS             4715..5200
                     /locus_tag="U1021_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system
                     mannose/fructose/N-acetylgalactosamine-transporter subunit
                     IIB"
                     /protein_id="HEM4711856.1"
                     /translation="MAIIATRIDGRLIHGQVANLWTTKLNISRIMVIDDAVAQNDIEK
                     QGLKLACPPGVKLSILPIEKAANNIKEGKYDAQRLLIVARRPENFLRLVEYGVELAEL
                     NVGNMSQSPETRSVTRSINVVDKDIADFDALAAKGVKLFAQMVPGDSPKDFMPLLDKV
                     R"
     gene            5239..6135
                     /locus_tag="U1021_001316"
     CDS             5239..6135
                     /locus_tag="U1021_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS
                     mannose/fructose/sorbose/N-acetylgalactosamine transporter
                     subunit IIC"
                     /protein_id="HEM4711857.1"
                     /translation="MMQWWQILLLTLYSAYQICDELTIVSSAGSPVFAGFISGLIMGD
                     MATGLAIGASLQLMVLGVGTFGGASRIDATSGAVLATAFSVSQGIDPELAVSTIAVPV
                     AALLVYTDIAGRFSTTFFAHRVDAAIERFDYAGIERNYLLGAIPWALSRALPVFLALA
                     FGGGFVDAMVKTIEQYQWIANGLTLAARMLPGLGFAILLHYLPLKRNLHYLAIGFALT
                     AMLTVLYGNVSALGGAVAGIVGTLPEDAGVAFVNNFKGLSMIGIAIVGAFLSVLHFKN
                     SQKVTVVAPSNSESGEIEDDEI"
     gene            6122..6940
                     /locus_tag="U1021_001317"
     CDS             6122..6940
                     /locus_tag="U1021_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009754896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HEM4711858.1"
                     /translation="MTKSNYKLTKEDFNQINKRSLFTFQLGWNYERMQASGYLYMILP
                     QLRKMYGDGTPELKEMMKLHTQFFNTSPFFHTIITGIDLALEESDGVASKDAVNGIKT
                     GLMGPFAPIGDSIFGSLVPAIMGTVAATMGKEGSPVGIFLWVAVAVAYDIFRWKQLEV
                     AYKEGTKLITTMRDKLTALVDAASVMGVFMMGALIATMINFEVTWAPNVGEKVIDIQD
                     LLNTIFPRLVPAVFTGFVFWLLGRRGMTSTKAILIIIGLAVGLSAIGHFVFGMA"
     gene            6940..7335
                     /locus_tag="U1021_001318"
     CDS             6940..7335
                     /locus_tag="U1021_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM4711859.1"
                     /translation="MTRSLVLVSHGIFCEELKKSTEMIMGPQEDIYTVALLPEEGPED
                     FQKKFEETIANLDDFVVFADLLGGTPANVVSRKLIEGGQFDLYAGMNMPMVIGFLNGV
                     LLGEAVDYVEFGTSNLVHVNSLLTSDEDE"
     gene            7564..8565
                     /locus_tag="U1021_001319"
     CDS             7564..8565
                     /locus_tag="U1021_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HEM4711860.1"
                     /translation="MIEVKTFGEKAKLYCLENKNGMQVTLTDFGARVVGVFLPVEEGG
                     NLRNVSLGAGAAEEYLQTDPYPGATIIPVAGRISDAQVEIGGHVYPLTENEPGRTLHG
                     GIGTANEQYWDAELDHERNQVTFGITLKDGFNGFPGDVMVKAIYRLTDANELMVEYRA
                     VSDKDTIFNPTNHIYFNLTGDFQRSVAEHRIKIAANHYAPLGEDNLPTGVLEDVTGTP
                     FDFRDFAPFAQGFDGQYPQNVLVKGYDHPWLLEEVDIPVEVLSPDGKIGLSVKTNQPA
                     VVIYTYNFPVEALACYHGVFSLECQALPNACNVDGFGSILLEQGEEFLSKTTYRFTW"
     gene            8672..8929
                     /locus_tag="U1021_001320"
     CDS             8672..8929
                     /locus_tag="U1021_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011074664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1912 family protein"
                     /protein_id="HEM4711861.1"
                     /translation="MMTKEQEFLKEFEAWVNTQVMVNEMAVEESRRVLEEDKDERAAD
                     AYIRYESKLDAYRFIQGKFANYHAGKGFHDLPDELFGQRHY"
     gene            8944..9330
                     /locus_tag="U1021_001321"
     CDS             8944..9330
                     /locus_tag="U1021_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEM4711862.1"
                     /translation="MAKKKVNRKKQLKKQLADLKRAGRVGLERAAEVVETVAHKAEAV
                     VEHAVEQVKEVVAEVTSSATSLEDFLALPELEGIAAARLETFYEAGIQSVADFANHTE
                     KELLALKGIGPATIKQLKEKGIELKA"
     gene            9572..9961
                     /locus_tag="U1021_001322"
     CDS             9572..9961
                     /locus_tag="U1021_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM4711863.1"
                     /translation="MLHHVEIYVSNLETSRAFYDFLLTKLGYSLYQEWEEGLSYKKAE
                     QYLVFVQTPEDFLEAGYHRCRTGLNHLAFHVGTPDDVDKWRQEFLARRVKLLYDDRYP
                     HAGGSDHYALYLEDPDGIKIELVGEAT"
     gene            9958..10530
                     /locus_tag="U1021_001323"
     CDS             9958..10530
                     /locus_tag="U1021_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001021306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEM4711864.1"
                     /translation="MNLVIIGAQASGKMTIGQEVERLTDLVLFHNHESIDFVTKFFPM
                     SDEARELINDIRMKFFETSAKTDLGLIFTVVIDFNDPADISFLEQIQAIYHSRNQAVL
                     FIELETDLQERLRRNVTENRLQHKPWKRNIEWSEKDILDTMKFANFNPEFAPKQLDHY
                     LKINNTRLSANDVAQLIIQKMEELEQEQTK"
     gene            10648..13299
                     /locus_tag="U1021_001324"
     CDS             10648..13299
                     /locus_tag="U1021_001324"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014623308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEM4711865.1"
                     /translation="MSKELSPKYNPAEVEAGRYQTWLDQDVFKPSGDAEAKPYSIVIP
                     PPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQG
                     VTRYDLGREKFLDKVWEWKDEYAATIREQWGKLGLSLDYQRDRFTLDEGLSKAVRKVF
                     VELYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVAT
                     TRPETMFGDVAVAVNPEDPRYKDLIGKNVILPIVNKLIPIVADEHADPEFGTGVVKIT
                     PAHDPNDFLVGQRHNLPQVNVMNDDGTMNELAGEFAGMDRFEARKATVAKLQELGALV
                     EIENRVHSVGHSERTGVVVEPRLSTQWFVKMDQLAKNAIANQDTADKVEFYPPRFNDT
                     FLQWMENVHDWVISRQLWWGHQIPAWYNESGEMYVGEEAPAGDGWVQDEDVLDTWFSS
                     ALWPFSTMGWPDTEAEDFKRYYPTSTLVTGYDIIPFWVSRMIFQGIEFTGRSPFKNAL
                     IHGLIRDEEGRKMSKSLGNGIDPMEVIEKYGTDSLRWFLSNGSAPGQDVRFSYEKMDA
                     SWNFINKIWNISRYILMNNEGLTLDAARENVAKVAAGEAGNVTDRWILHNLNETIAKV
                     TENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEAEKVMTRSVLLYTLDQI
                     LRLLHPIMPFVTEEIFAQYAEGSIVVAAYPVVNPAFENAEAHKGVESLKDLIRSVRNS
                     RAEVNVAPSKPITILIKTADSDLETFFKANENYIRRFTNPEQLEISSSIAAPELAMSA
                     VITGAEIFLPLADLLNVEEELARLDKELAKWQKELDMVGKKLSNERFIANAKPEVVEK
                     EKEKQADYQAKYDATVARIEEMKKLVK"
     gene            13384..>14375
                     /locus_tag="U1021_001325"
     CDS             13384..>14375
                     /locus_tag="U1021_001325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711866.1"
                     /translation="MTSSNATPSAFGWVFQANLGLYLIMDEDLKQIKKFKIEGETEDI
                     EIYYRDTTERKPKFIQAKSQEDPISDGTTSKHLSNALSSLLQVVTKVSGEYSELIYGT
                     NIEIPIRARVKQKLFEGNRIKLYYKELPEQFQTKIDGIVDVSEITSEELMSFKERFSI
                     LKISFYGQDNETRYKVVQEKVTSKLRSLGIEQYKCNRIFYYFQKEFIQNASKRVEYSI
                     EDLGLTIILFSFEDEENWSFNNLDIPEELISRIKAEFSNYILEKQLDFQFISQLVGDY
                     KKYSMTTPYIPSSQKIQHFVNDTFSNYSDYFLQKTTNVNQELIDCIIKVTVYRI"
BASE COUNT         4252 a         2505 c         3367 g         4251 t
ORIGIN      
        1 cgtgattatc tgtgaaaaaa tttagcctag gttagaaaaa tatgatataa tagtcaagat
       61 aaattgtaat tgtagaaagt tggtaacaaa gtgaaattac caaaggaagg tgactttatt
      121 acaattcaaa gttataagca tgacggtgaa attcatcgca cttggcgtga caccatggta
      181 ttaaaaacaa cggaaaatgc tattattgga gtcaataatc ataccttagt gactgaaaat
      241 gatggtaggc gttgggtaac aagagaacca gcaatcgttt attttcataa aaaatactgg
      301 ttcaatatca ttgcaatgat tcgtgaaaat ggagtttcct attattgtaa ccttgctagt
      361 ccatatgttc tcgacaatga ggcactcaaa tacattgatt atgacctaga tgttaaggtc
      421 tttgctgatg gtgaaaagag actgctggat gtggatgaat atgagcgtca tcgtaaggcg
      481 atgaagtatt cggatgatat tgattttatt ttgaaggaaa atgtcaagat actggttgat
      541 tggattaata accagcgcgg accattctct ccagcctacg ttaatatctg gtacaaacgc
      601 tatttagaac tgagaagtag ataaagttag aaaagaaaat cctgttttac aggctttttt
      661 cttattgtaa aggaggggct tatggccttt gaacaaacaa atgggcgcta tgcaagtttt
      721 ggagttgtga cctcgcttcc tggggaagtg attgatagtt tctggtatgt tattgatcac
      781 tacttaaaag gggttattcc attaaaaagt gtaatccatt tttctatcaa aaatcgtcgt
      841 ggtaagatta cgctggtctt ttcgcaggaa ggttataaaa atgtactggc tgtagatcta
      901 agtagtcgtt ttgatccttt ttatccctca acaatcttgg taatggacaa gcagggaaaa
      961 gagaccatta ctttgccaga tgaggtgacc ttgctttagc ttgaagagct ggtattttat
     1021 cacctaagat attgttaata tatgaaattt ggtgtaaaat agatttgtaa gcttatgtgg
     1081 gttagaaagg aggagtctat ggttagtcaa actgttgaaa aacctctcta tttgcagttg
     1141 gttgatgaat tggaagttgc aattcgcgaa aggatggctc cgaatgacaa gttattttca
     1201 gagcgtgagt tgacacaggt ttatggtgtc agtcgtatta cagttcgttt ggctttgcaa
     1261 gaattggaaa aacggggctt agtctataag aagcacggta agggaaccta tgtatctgag
     1321 atttcagata ctgcagttga tttgtctcag gcctatagtt ttactgagca aatgaaaaaa
     1381 attgggaaag taccgaggac atctatttta tcttttgaat tggttaaggc gtcggactat
     1441 attgcgcagc atttacaact tagtcaaggt gaggaagtgt ttgtagttga acgattgaga
     1501 cttgccgatg agattccgat gatgctagaa aggacatatg ttcctgcttc gctatttcct
     1561 ggattagctg ctcagcgaat gaagtcaact cccttgtatg aaattttttc agaggattat
     1621 catcaggtga ttcgtttggc agaagaagag ttctatgcaa gtattgcttt ggataatgaa
     1681 gctaagatac tcgggattcc aagcaatagt ccagtgcttc atttagtaag aaaaacgtat
     1741 aatgataaga atagaattat cgagtttacg tttagtattg ctagagcgga ccagtttcgt
     1801 tacaagatta cccatcaacg aggatattag aattaatact cttcgaaaat caaaactatt
     1861 cgttgtcaag agccttgatg aaatccagtt ctatcttcgc cttcgtttcc taggctactt
     1921 ttgattgtta ttgggtatga aaaaaacgcg gacgttagtc tgcgtttttt tagcgatggt
     1981 tggctgtaat ttcaaatttg taatacttcc agtgtttgta agtttcagta tattccatca
     2041 cttcaccgct agtactgtta gtagttgttt tgttttgtag tacagctggt tcagtcgctt
     2101 ttaatttcaa atgggtggca acctcttttg gacatgggct gacaatttca ttcgtttcta
     2161 caaatggttc ctcggacatg tggatattgt agtccagttt gaagcgttga tagattgatt
     2221 gatagtgctc gagtggagca tcgggattct ggatatatcg ttgagggatg tatgaattgt
     2281 ggaagatgta tggagtgtct tctgctgcgc ggacacgcac aattttatag taaaactcat
     2341 tcttgtcaag atttagtttt tcaaggatat cgggtttatt gcctttttcg cacgagagaa
     2401 cagtaacctt atccttatcc ataggaaaaa tctcaatatc agaaaattct acaagacgtc
     2461 ctttgcgtga acgagataca aaggttcctt taccttgttg gcgaacgagg taaccatctt
     2521 taactagttc gtttactgca cggataacgg taatggagct aacattaaat agttttgtta
     2581 attcagattc tgtgtaaaat ttgtcgccat tttcaaattt gccagaaaca atctgttggc
     2641 gtaagtcgtt ttgtataagt tggtacttcg gtactttcat acttatttcc ttcctttcca
     2701 cagcttatta tactaaatta gttgatgaaa atcaaaaaat atagctaaaa tacccacaaa
     2761 aatatacttt ttcactttat aaaggtgata agaaatagta aaaaaatttt taaaaagtac
     2821 tggacataac cacaaagaag tgttagtata ttaatagaaa ggtaagcggt tgcatcggag
     2881 gaagaaatga aagaatttta tattggagac caattttatt tggacggtga accctttaag
     2941 attttatcag gcgcgattca ttattttcgt gtccatcctg atgattggta ccattctttg
     3001 tataacttaa aggcccttgg ttttaatacg gttgaaacct atgtcccttg gaatatgcat
     3061 gaacctcgaa agggtgagtt ttgttacgag ggtatattgg atattgagcg atttttaaaa
     3121 ttggctcaag aattagggct ttatgcaatt gtacgtcctt ccccttatat ttgtgcggag
     3181 tgggaatggg gtggcctccc tgcttggttg atgaaggaag agcttagagt acgttcgagt
     3241 gattcggtgt acttgcagca cttagatgaa tattacgctt ctcttattcc taaattggcc
     3301 aagctccaac tcgcacaggg tggaaatgta cttatgttcc aagtggaaaa tgagtatggc
     3361 tcttatggcg aggagaagga gtatctaaga tcggtggctg gcttgatgcg taaacatggt
     3421 ctaactgctc ccttgtttac ctcggacggt tcttggcgag caacattacg tgcaggaaca
     3481 ctgatagagg acgatgtatt tgtaacagga aactttggtt ctaaagctag agagaatttt
     3541 gcaaatatga cggcattctt taatgaacat cagaagaatt ggccactcat gtgtatggaa
     3601 ttttgggatg gttggttcaa tcgttggggc gatgaaatta ttcgtagaga gccggaagaa
     3661 atggttgatt cggttatgga atgtatcgaa ttgggctccg tgaatctgta catgttccat
     3721 ggtggaacaa attttggttt catgaatggt tgctctgctc gtggtcaaat tgatttgcct
     3781 caggtaactt cttatgatta tgatgctata ttggatgaag ctggaaatcc tactaagaag
     3841 ttttatattt tgcaacaacg tttgaaagaa gtctatcctg aattagagta tgcagaaccg
     3901 cttgtaaaag aggcaaaagc tttttcagat gtgtcgcttc atgataaggt gagtctattt
     3961 gttactctag aaaatgtaag cgattgcgta aaagggtttt atcctaagaa tatggaagaa
     4021 cttgatcagt caacaggtta tattttatat agaacagagt tggagcggga taagacagaa
     4081 gcggaacgtt tccgagtggt tgatgcgcgt gaccgtatcc aaatttatgc agatggaaaa
     4141 ttcgttgcaa ctcagtatca gacagagatt ggtgacgatg ttgaattgga ttttaaagat
     4201 gacaagctaa cattagatat tttggtagaa aatatgggac gtgtcaatta tgggcacaaa
     4261 ctaacggctc ctacccagtc taaaggtctt ggtcgaggtg cgatggctga tttacatttt
     4321 attggtcatt gggaaaccta tcctttgcat cttgagtcag ttgaggacct ggattttagt
     4381 aagggctggg aggaaggtca agctgctttc tatcgttatc agtttgaact agatgaactt
     4441 gcggatactt acttagacat gacaggtttt ggtaagggag ttgttttcgt taataatgta
     4501 aatatcggac gtttctggga aaaaggacct atcctctatc tctatattcc aaaaggatac
     4561 ttaaagaaag gagaaaatga aatcgtcgtc ttcgagacgg aaggaaaata tagagagaag
     4621 attagttttt cacaggaacc cgtttataaa gaggtgtaag tgttctgcag agaacatcta
     4681 acagaaagat ttatgaagaa aaggagaaca ctgtatggca attattgcta cgcgtattga
     4741 tggtcgtttg atccacggtc aggttgctaa cctttggact actaaattaa atattagtcg
     4801 aatcatggtt attgacgatg ctgttgctca aaacgacatt gagaaacaag gtttgaaatt
     4861 ggcttgccca ccgggggtaa aattatctat tttgccaatc gaaaaagcag ccaataacat
     4921 caaggaaggc aaatatgatg cgcaacgtct cttgattgtt gctcgtcgtc cagaaaactt
     4981 ccttcgcttg gtagaatatg gtgtagaact tgctgaattg aacgtcggca atatgtcaca
     5041 atcaccagaa actcgttctg taactcgttc tattaacgtt gtagataagg atattgcaga
     5101 ttttgatgcc ttggcggcta agggtgtaaa attatttgca caaatggtac ctggcgattc
     5161 accaaaagac tttatgccat tattggataa ggttagataa cattcggata tttttgaaaa
     5221 atttaaagga ggatcactat tatgcaatgg tggcaaatat tacttctaac gctctactct
     5281 gcttaccaga tttgtgatga gctgaccatc gtatcgtcag ctggatcacc agtttttgca
     5341 gggttcatct ctggtttaat catgggcgac atggcaacag gtttggcaat cggtgctagc
     5401 ttgcagctca tggtacttgg tgtaggtact ttcggtggtg catctcgtat cgacgcaacc
     5461 tctggtgcgg tattggcaac tgccttctct gtatcacaag gtattgaccc tgaacttgcg
     5521 gtatctacta tcgcggttcc agtagcagca cttcttgttt atacagatat tgctggtcgt
     5581 ttctcaacta ctttctttgc acaccgtgta gatgctgcga ttgaacgctt tgactacgct
     5641 ggtatcgaac gcaactactt gcttggtgca attccttggg cactttctcg tgcacttcca
     5701 gtcttccttg ctcttgcttt tggtggtggg tttgtagatg caatggttaa aactattgaa
     5761 caataccaat ggattgccaa tggtttgacg cttgcagctc gtatgcttcc aggtcttgga
     5821 tttgcaatct tgctccacta ccttccactt aaacgtaacc ttcactactt ggcgataggt
     5881 ttcgccctta cagctatgtt gactgttctt tacggtaatg tgtcagcttt gggtggtgca
     5941 gttgctggta tcgttggtac tcttcctgaa gatgcaggcg tggcttttgt taacaacttc
     6001 aaaggcttgt caatgatcgg tatcgctatt gtgggtgcat tcctttcagt gcttcacttc
     6061 aaaaatagcc aaaaagtaac tgtggttgct ccatcaaatt cagaaagtgg ggaaattgaa
     6121 gatgacgaaa tctaattaca aattaacaaa agaagatttt aatcaaatca acaaacgtag
     6181 tttattcact ttccaacttg gttggaacta cgagcggatg caagcgtctg gctacctcta
     6241 catgattttg ccacaattgc gtaaaatgta tggagatggt actcctgagt tgaaggaaat
     6301 gatgaaactg catacccagt tcttcaatac ttcaccattc ttccacacta ttatcacagg
     6361 tattgacttg gcgcttgaag aaagcgacgg tgtagcttct aaggatgcgg ttaacggtat
     6421 taagactggt ttgatgggtc catttgcccc aatcggtgac tctatctttg gttctcttgt
     6481 tccagcgatt atgggtactg tggcagcgac tatgggtaag gaaggttctc cggtaggtat
     6541 tttcctttgg gtagccgtgg ctgttgcata tgatattttc cgctggaaac agttggaagt
     6601 tgcctacaaa gagggaacta aactcatcac aactatgcgt gataagttga cagctcttgt
     6661 agatgctgct tctgtaatgg gtgtcttcat gatgggtgcc ttgattgcaa ccatgattaa
     6721 ctttgaagtg acttgggctc caaatgtagg tgagaaagtg attgacattc aagacttgct
     6781 caacacaatc ttccctcgcc ttgttccagc tgtctttaca ggatttgtct tctggcttct
     6841 tggtcgtcgt ggcatgactt cgactaaagc catcttgatt atcattgggc ttgcagttgg
     6901 actttctgca atcggtcact tcgtatttgg tatggcataa tgactagaag tttagtatta
     6961 gtaagtcatg gtatcttctg tgaagagttg aagaaatcta ctgagatgat tatgggtcct
     7021 caggaggata tctatacagt agctctttta ccagaagaag gtccagaaga cttccagaaa
     7081 aaatttgaag aaacaattgc taatctagat gacttcgttg tcttcgcaga tttgttaggc
     7141 ggtacaccag ccaatgtcgt atcacgaaaa ttgattgaag gtgggcagtt tgacctttat
     7201 gcagggatga acatgccaat ggttatcggt ttcttgaacg gcgtcctgct gggagaagct
     7261 gtggattatg tagaatttgg gacaagcaac ctagttcatg tcaatagtct attaacaagt
     7321 gatgaagatg agtgaaaaac tccagtggag tttttcagcc cgagcttaga aataagagag
     7381 cgagggaagt ctaagtgact gtttcagccc gagcctagaa ataagagagt gaggctaact
     7441 cagccgattg ttacagacgg atttgatttt cgttaattat aaaatgttct atagttgata
     7501 ggctttaagt atcctgaggg agttacaata gtgactccct catttggctt atgaggaaaa
     7561 gaaatgattg aagtaaaaac atttggtgaa aaagcaaaac tgtattgctt ggaaaacaag
     7621 aatgggatgc aagtaacctt gacggatttt ggagctagag tggtgggagt gttcctccct
     7681 gtggaagaag gtggcaattt acgaaatgtc agtttgggag cgggggcggc tgaggaatat
     7741 ttgcagacgg atccctatcc cggggcaacg attatccctg tggcaggacg gatttcggat
     7801 gctcaggtgg aaattggtgg acacgtttat ccattgacag aaaatgaacc gggtcggacc
     7861 ttgcatggtg gtattggaac ggcaaatgag cagtactggg acgctgagtt agaccatgag
     7921 agaaatcaag ttacctttgg tattacctta aaagatggtt tcaatggttt tccaggcgat
     7981 gtgatggtca aggcaattta tcgtctgaca gatgccaatg agctcatggt tgagtaccgg
     8041 gctgtatcgg ataaggatac gattttcaat ccgaccaacc atatctattt caacttgact
     8101 ggtgattttc aacggtcagt tgccgagcac cgtattaaaa ttgcggccaa tcactatgct
     8161 ccgcttgggg aggataacct gcccacgggt gtcttagaag atgtgacagg gacgccgttt
     8221 gattttagag attttgcgcc ttttgctcag ggatttgatg gccaatatcc tcaaaatgta
     8281 ttggtaaaag gctatgacca cccatggtta ttggaagagg tggatattcc ggtagaagtt
     8341 ttgagtccag atgggaaaat tggactcagt gtcaaaacca accagcctgc ggtcgttata
     8401 tatacatata attttcctgt tgaagctttg gcctgttacc atggtgtctt tagtttagag
     8461 tgtcaggcct tgccaaatgc atgcaatgtc gatggatttg gttcgatttt attagaacaa
     8521 ggagaagaat ttttgtctaa aacgacctat cgttttactt ggtaaaaaaa tggggactct
     8581 gactgtgtta cagttagggt tttcttgtgt tttctagaaa atatggtata ataaaccggt
     8641 gtgtttcaat cgaagcaggc gaaagaggaa aataatgaca aaagaacaag aatttttaaa
     8701 agaatttgag gcttgggtca acactcaggt catggtaaat gagatggcgg ttgaagaaag
     8761 tcgtcgtgtc ttggaagaag acaaggatga gcgtgcagcg gatgcttata ttcgttatga
     8821 gagcaagctg gatgcctatc gattcattca agggaaattt gctaactacc atgctggcaa
     8881 aggttttcat gatttaccag atgagttgtt tggtcaaagg cattattaag gagaggagtt
     8941 aacatggcaa agaaaaaagt aaatcgaaaa aaacagttga aaaaacaatt agcagacttg
     9001 aaacgtgcag gtcgtgtagg tcttgaaaga gctgcagagg tagtagagac agttgctcac
     9061 aaggctgagg ctgtagtaga gcatgctgtg gaacaagtga aagaagttgt agcagaggtg
     9121 acttcttcag cgacttcatt ggaagacttt ttggcacttc ctgagttgga aggcattgcg
     9181 gcagcacgtt tggaaacctt ctacgaagcg ggtattcaat ctgtggctga ttttgcaaac
     9241 catacagaaa aagagctctt ggctcttaaa ggcatcggtc ctgcaactat caagcagttg
     9301 aaagaaaaag ggattgagtt gaaagcttaa atcccttgct tttcaaggta caatttgtta
     9361 caataaagcc attcagaggt gttttgatct ccatttgtca caggaagcgg tggtactgag
     9421 aaatccgcac aaatgtcaaa actggttgct gatgatgtga atcgaataag cagagtgcag
     9481 ataatgtatc tgaacaaggg tggtaccgcg gaataacttc gtccctgtct agcaagtcta
     9541 ggcggggatt ttcatttgga aaggagaaaa tatgttacat catgttgaaa tttacgtttc
     9601 taatttggaa acctcgcgtg cattttacga ctttctcctg accaagctgg gctactcgct
     9661 ctatcaggag tgggaggaag ggctgtctta taaaaaagca gagcaatacc tggtctttgt
     9721 ccaaacgcca gaggacttcc tagaggcagg ttatcaccgg tgccgtacag gtctcaatca
     9781 tctagccttc catgtgggca cacctgatga tgttgacaaa tggcggcagg aatttttggc
     9841 cagacgagtc aaattgctgt atgatgaccg ctatccacat gcaggaggat cagatcacta
     9901 tgccctctat ttggaagacc cagatgggat taagatagag ttggtggggg aggcaacatg
     9961 aatttagtaa ttattggagc acaagcttct ggcaagatga ccattgggca ggaggttgaa
    10021 agattaactg atttggtttt atttcacaat catgaatcaa tcgatttcgt aacaaaattt
    10081 tttccaatgt ctgacgaagc gagagaactt attaatgata ttcgtatgaa gttttttgaa
    10141 acctctgcga aaactgattt gggtttgatt tttacagttg ttattgactt taatgatcca
    10201 gcagatatat cctttttaga gcagattcaa gcgatttatc atagtaggaa tcaagctgtt
    10261 ctgtttattg aattggaaac agacctgcaa gaacgtttaa gaagaaatgt gactgaaaat
    10321 cgtctgcaac ataaaccttg gaaaagaaat attgagtggt ctgaaaaaga tattctagat
    10381 acaatgaagt ttgcaaactt taatccagaa tttgcgccga agcaacttga ccattatctc
    10441 aaaattaata atacccgtct ttctgccaat gacgtagctc aactaattat ccaaaaaatg
    10501 gaggagcttg agcaagagca aacgaaatag ccagcccaaa ggactgacta tttctaggag
    10561 attatatgaa aaagaaaagt tttgctattt ctagcttgag gatagtataa accaattttc
    10621 ttaaagaata ctaaaggaga aaaaataatg tcaaaagaat tatcaccaaa atacaatcca
    10681 gccgaggttg aggccggtcg ttaccagact tggttggacc aggatgtctt taagccgtca
    10741 ggtgatgcgg aggctaagcc ttattctatc gtcattccgc cgccaaacgt aacaggtaag
    10801 ttgcacttgg gacacgcttg ggataccacc cttcaagata ttatcatccg tcagaagcgt
    10861 atgcagggct ttgataccct ctggcttcca ggtatggacc acgcggggat tgctactcag
    10921 gctaaggttg aggaacgctt gcgggagcaa ggtgtgaccc gttatgactt gggccgggaa
    10981 aaattcctcg acaaagtctg ggaatggaag gatgagtacg cagcgactat tcgtgagcaa
    11041 tggggcaagt tgggtctgtc tttggactac caacgtgacc gcttcacgct ggacgaaggc
    11101 ttgtcgaaag ccgttcgcaa ggtctttgta gaactctaca aaaaaggctg gatctaccgt
    11161 ggtgaattta tcatcaactg ggacccagcg gctcgcacag ccctttctga tatcgaggtt
    11221 attcacaagg acgtagaagg tgctttctac cacatgaatt acatgttgga agatggttct
    11281 cgtgcccttc aagttgcgac aactcgtcct gaaaccatgt tcggtgacgt tgcggtggcg
    11341 gttaacccag aagacccacg ttacaaggac ttgattggca aaaatgttat cctgccaatt
    11401 gttaacaagt taattccaat cgttgcggat gaacacgcag acccagaatt tggtacgggg
    11461 gttgtgaaaa tcacacctgc ccacgatcca aatgacttcc tcgtaggtca acgccacaat
    11521 ctgccacaag tcaatgttat gaacgacgat ggtactatga acgagttggc aggcgaattt
    11581 gcaggtatgg accgctttga agctcgtaag gcaacggttg ctaagttgca agaactaggt
    11641 gccctagtgg aaatcgaaaa ccgtgtgcat tcagttggtc actcagagcg tactggtgtg
    11701 gtagttgagc cacgcttgtc aacccagtgg tttgttaaaa tggaccaatt ggctaagaat
    11761 gccattgcca accaagacac agctgataag gtagaatttt acccgccacg tttcaacgat
    11821 actttccttc aatggatgga aaatgtacac gactgggtca tctcgcgtca gctttggtgg
    11881 ggtcatcaga ttccagcatg gtataacgaa tctggcgaaa tgtacgtcgg agaagaggct
    11941 ccagcaggtg acggttgggt acaggatgag gatgtcctag atacctggtt cagctctgcc
    12001 ctttggccgt tttcaacaat gggttggcct gacacagaag cagaagactt caaacgttat
    12061 tatccaacct ctacgttggt aactggatat gatattatcc cattctgggt atcccgtatg
    12121 attttccaag ggatcgaatt tacaggtagg agcccattta agaatgctct catccacgga
    12181 cttatccgtg acgaagaagg acgtaagatg tcgaaatccc ttggcaatgg gattgaccca
    12241 atggaagtca ttgagaaata cggtacagac agtcttcgct ggttcttgtc taacggttct
    12301 gctccgggac aggatgtccg tttctcatat gaaaagatgg acgcttcttg gaacttcatc
    12361 aacaagattt ggaacatttc acgctatatc ctcatgaaca atgaaggttt gaccttggat
    12421 gcggcgcgtg agaatgttgc caaagtcgca gctggcgagg ctggcaatgt gacggaccgc
    12481 tggattctcc acaacctcaa cgaaaccatt gccaaggtca ctgaaaactt cgacaagttc
    12541 gagtttggtg tggctggtca catcctctac aacttcatct gggaagagtt cgccaactgg
    12601 tatgttgagt tgaccaagga ggtactctac agcgataacg aggccgagaa agtcatgacc
    12661 cgctctgtcc ttctctacac gctggaccaa atccttcgcc tcctccaccc aatcatgccg
    12721 tttgtgacgg aagagatctt cgctcagtac gcagagggct ctatcgtggt ggcagcttac
    12781 cctgttgtca acccagcctt tgaaaatgct gaagcccaca agggagtgga aagccttaag
    12841 gatctgattc gttcggtgcg aaatagcaga gcagaggtca atgttgcccc atctaagccg
    12901 attaccattt tgattaagac agcggattct gatcttgaaa ccttcttcaa ggcaaatgaa
    12961 aactacatcc gacgctttac aaatccagaa cagttggaaa tcagctcaag cattgctgca
    13021 ccagaactag ccatgtcagc cgttatcacc ggtgctgaaa tcttcttgcc actagccgac
    13081 ctcctcaacg tagaagaaga gttggctcgt ctggacaaag aactagccaa atggcaaaaa
    13141 gaactagaca tggtcggcaa aaaactcagc aacgaacgct tcatcgccaa cgctaaacca
    13201 gaagtcgttg aaaaagaaaa agaaaaacaa gccgactacc aggcaaaata cgatgcgaca
    13261 gtagcgcgga ttgaagagat gaaaaaactt gttaagtagg tagaataaga taaaacccca
    13321 gcctaaaaag gctggggttt gtggtataat aaggtaagaa gttggaaatc gagaggtaaa
    13381 taaatgacta gttctaatgc gacgccatca gcatttggtt gggtttttca agcaaatcta
    13441 ggactatatt taataatgga tgaagattta aaacaaatta agaaatttaa gattgaagga
    13501 gaaactgagg atattgaaat ttactataga gatacaacgg agagaaaacc aaagtttatc
    13561 caagcaaagt cacaggaaga tcctatatct gatggaacga cttcgaaaca tttgagtaat
    13621 gcattgtctt ctctcctgca agttgtcaca aaagtttcag gtgaatatag tgagttaata
    13681 tatggcacga atattgaaat tccgataaga gctcgagtta aacagaagct ttttgaagga
    13741 aataggataa agttgtacta taaagagttg ccggaacaat ttcaaacaaa aatagatgga
    13801 attgttgatg tttcagaaat aacaagtgaa gaattgatgt cgtttaaaga aaggttttca
    13861 attttaaaaa tttcttttta tggccaggat aatgaaacaa gatataaagt agttcaagaa
    13921 aaagttacat ctaagttacg ttcattagga atagaacaat ataagtgtaa tagaatattt
    13981 tactattttc aaaaggaatt tattcaaaat gcttcaaagc gtgttgagta tagtattgaa
    14041 gatcttggat taactataat tttatttagt tttgaagatg aagaaaattg gagttttaat
    14101 aatttagata ttccagaaga acttatatct cgaattaaag cagaattttc taattacatc
    14161 ttagaaaaac agcttgattt tcaatttatt agtcaacttg ttggagatta taaaaagtat
    14221 agtatgacaa caccatatat accttcatct caaaagattc agcactttgt taatgatact
    14281 tttagtaatt attctgatta ttttttacaa aaaacaacta atgttaatca ggaacttata
    14341 gattgcatta taaaagttac tgtatatcga atttt
//
LOCUS       DASFQD010000058        14269 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.058, whole genome shotgun sequence.
ACCESSION   DASFQD010000058 DASFQD010000000
VERSION     DASFQD010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 14269)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14269)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14269
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.058"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(210..1070)
                     /gene="metF"
                     /locus_tag="U1021_001326"
     CDS             complement(210..1070)
                     /gene="metF"
                     /locus_tag="U1021_001326"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HEM4711867.1"
                     /translation="MIGQTPSLSFEIFPPKPEVGNEKIIQTLDEMQGLAPHFISVTCS
                     NNNLNVEETTVKLANHVRNELHIPTIAHLPAAYLTKEKVRSVLHSLDEIGVHQILALR
                     GDIIEGLPPKEDFQYATDLISFIKEEAPHFDIIGACYPEVHPESPNSVSDIKNLKKKV
                     DAGCSTLVTQLFFDNEAFYNFQEKCSLADIEVPIIAGIMPIINRNQALRLLKTCENIR
                     LPRKFKAILEKYEHNPESLRAAGLAYAVDQIVDLVTNDVAGVHLYTMNNAETARTIHQ
                     ATHSLFKHYS"
     gene            complement(1074..3323)
                     /gene="metE"
                     /locus_tag="U1021_001327"
     CDS             complement(1074..3323)
                     /gene="metE"
                     /locus_tag="U1021_001327"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009729869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEM4711868.1"
                     /translation="MTTTIIGFPRIGENRELKFITEKYFRNEIPQEELLTAAKDLRAK
                     HWTIVKEAGITEIPSNDFSHYDNVLDAAVLFNIVPKAVQNLDLTDLEKYFALARGYQG
                     EKGDVRARPMKKWFNTNYHYIVPAIEKDTEIKLAGHKIFDEFQEAKNLGITTRPVLIG
                     PFTLLQLTDFEEGLTATNFADSLVAAYGQVFEKLAELGAEKIQLDEPSLVKDLTAEEK
                     ALFLNIYQTLLADKKGLQVLIQTYFGDVRDIYTELTSLPVDAIGLDFVEGKETAALVA
                     TGFPADKTLYAGIVNGKNIWRNHYEKSLAILDAIPAENVVLTTSCSLLHVPFTTANEE
                     FEPAILNHFAFAVEKLNELRDLDAIRNGQGETALAANKELFSLERVGRDTVLADRLAG
                     LTDADYTRLPVFAEREAIQREKLNLPLLPTTTIGSFPQTKEIRSTRLAFRKGNISEEE
                     YDTFVKAQTDEWIAWQEEVDFDVLVHGEFERNDMVEYFGENLSGYLFSKNGWVQSYGM
                     RGVKPPIIWGDVTRLNPITVKWSSYAQSRTNKPVKGMLTGPVTILNWSFPREDISIKE
                     STLQIALAIKEEVLDLEAAGIKIIQIDEAALREKLPLRRSDWYSEYLDWAIPAFRLVH
                     STVAPETQIHTHMCYSEFTDIIPAIDNMDADVISFEASRSNLVILDELKAKNFQTQVG
                     PGVYDIHSPRVPAVDEIAHTIQAILAKVPKEKVWINPDCGLKTRGESETKASLIHLTQ
                     AAKTARKEL"
     gene            3704..4393
                     /locus_tag="U1021_001328"
     CDS             3704..4393
                     /locus_tag="U1021_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEM4711869.1"
                     /translation="MGKVIIGISGNEQEFPTKSGRVYVTVARELADSVRQAGGVPMVI
                     PMGTPDLAKDYIEMIDKLILSGGQHVDPSLYGQKRLIDSDDYLLERDAFELALIEEAL
                     RQGKPIFAVCRGMQLLNVALGGSLEQEVADHWQEGIEGTSHRLQVKPKSRVSQLFSQG
                     SSINSFHHQRIKDLAPGLVATGLDPRDGTIEAYESKGKQALFGIQWHPEFLYNDCKQH
                     RDLFQYLVDIF"
     gene            4545..5402
                     /locus_tag="U1021_001329"
     CDS             4545..5402
                     /locus_tag="U1021_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEM4711870.1"
                     /translation="MKLKKLFSLATAALSVGVLAACGSSSTSSSSDSSATTVRVGVMS
                     LSDSEQARWDKVQEILGDEVKLEFTQFTDYSQPNKAVAENEVDINAFQHYNFLNNWNE
                     ENGEDLVAIADTYIAPIRLYSGTADGRNKYTKVEEIPDGAEIAVPNDPTNESRALYLL
                     QAAGLIKVGVSGTELATIADITENKKNLKITELDASQTASSLSSVDAAVVNNTFVLEA
                     GLDYKNALYKEQKDENSKQWYNLIAARSDWEKSEQVAAIKKIIEAYHTDEVKKVIEET
                     SDGMDEPVW"
     gene            5558..6925
                     /locus_tag="U1021_001330"
     CDS             5558..6925
                     /locus_tag="U1021_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEM4711871.1"
                     /translation="MADSKVQLFENDAIIQTYFEKLKVLISKKSIFAQQIGLLDVATY
                     LKEMFEEAGADVVLDDSYAAPFVMATFKASVPDAKTLIFYNHYDTVPADADQVWEKGN
                     PFELTISEGYIYGRGVDDDKGHITARLSALKKYQARQDGQLPVNIIFIMEGAEESASV
                     DLDKYLSKYKEYLIGADLLVWEQGHRNSLHQLEIAGGNKGIVTFDLQVKSADLDIHSS
                     YGGVIDSASWYLLSALQSMRAVDGRILVDGIYEQVQEPNERELALVEEFALATSQSVT
                     DIYGLTLPTLVEDRREFLKRLYFEPSITIEGLSTGYLGQGVKTIIPAQASAKMEVRLV
                     PGLEPHDVLDKIRQHLDKHGFDKVEVVFTLGEMSYRSDMSHPAIVNVIGLAKKLTPEG
                     VAVLPTSPGTGPMHTVFHALGVPIAGFGLGNANSRDHAGDENVSIADYYSHVELVEEL
                     IASYE"
     gene            6918..7982
                     /locus_tag="U1021_001331"
     CDS             6918..7982
                     /locus_tag="U1021_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEM4711872.1"
                     /translation="MSKEMIKLDNIDVTFQQKKRTIEAVKDVTIHINQGDIYGIVGYS
                     GAGKSTLVRVINLLQVPSAGKITIDEDVIYEGEKVTLTPAQLRSKRREIGMIFQHFNL
                     MAQMTTEENVAFALKHSGLSKEEKKEKVAKLLDLVGLSDRAENYPAQLSGGQKQRVAI
                     ARALANDPKILISDESTSALDPKTTKQILALLQELNEKLGLTIVMITHEMQIVKDICN
                     RVAVMQDGRLIEEGSVLEIFSHPKEELTQDFIKTATGIDEALVKIYQQDIVQNLPENS
                     ILVQLKYAGSNTDTAIVNDLYKFYQVSANILYGNIEILDHTPVGEMVVILSGEPGQLH
                     RAIEAVTEARVEVTILKGAN"
     gene            7983..8675
                     /locus_tag="U1021_001332"
     CDS             7983..8675
                     /locus_tag="U1021_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4711873.1"
                     /translation="MLEWIQTNFPDIYKLGWDGQTGWLTHFYLTLYMTFVSFAFGGFM
                     GLVSGLFLVLTGPRGVIANKTVYWILDKVASIFRAIPFIILLAAIAPLTKIIVGKTIG
                     TEAALVPLALSVFPFFARQVEVVLSELDRGVIEAAQASGATFWDIVLVYLREGLPDLI
                     RVTTFALVSLVGYTAMAGAIGAGGLGQVALSYGYLRYNDDVTFLATFLILVIIFAIQF
                     IGDFLTRKISHR"
     gene            8857..9561
                     /locus_tag="U1021_001333"
     CDS             8857..9561
                     /locus_tag="U1021_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B3/4 domain-containing protein"
                     /protein_id="HEM4711874.1"
                     /translation="MSQFVVDSSFWSLFPDAKIGVLLLKDCKTPAQSPDELVKLLEES
                     NGIAQKFLTEDTFSENEVIRTYRQAYQKFKTKKGARSSIEALLKRSTSDRPVTTISPL
                     VDIYNAASLRFGLPCGAEDLDTFVGNLQLTVTEGGDEFYLIGDETNNPTLPGEVCYKD
                     DKGAVCRCFNWRDGERTMITDETKNAFLVMELVNSDRVEDLENALDFISQHAEKFLGV
                     VPEKYLLDCDRPAIAL"
     gene            9828..10307
                     /locus_tag="U1021_001334"
     CDS             9828..10307
                     /locus_tag="U1021_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1398 family protein"
                     /protein_id="HEM4711875.1"
                     /translation="MWFFLSADGVFLVFHLKVKDRYCKERRPMFTLENINHGHEQFTG
                     PDFPKLVAYFKDLGMVENTVDIQSGQVTYRSQTGQTLEKTGYQVTIPIADQVNRDQFV
                     TILRNHQAGQTDFPTFCQETAEAGIYKWVIDLEAMTCSYLDQAEQAVFVETVPSVEN"
     gene            10513..11430
                     /gene="glyQ"
                     /locus_tag="U1021_001335"
     CDS             10513..11430
                     /gene="glyQ"
                     /locus_tag="U1021_001335"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018163989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEM4711876.1"
                     /translation="MSKKLTFQEIILTLQQFWNEQGCLLMQAYDTEKGAGTMSPYTFL
                     RAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQFQVVMKPSPSNIQELYLESLER
                     LGINPLEHDIRFVEDNWENPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTAE
                     VTYGLERLASYIQEVDSVYDIEWADGVKYGEIFIQPEYEHSKYSFEVSDQDMLLENFT
                     KFEKEAERALEEGLVHPAFDYVLKCSHIFNLLDARGAVSVTERAGYIARIRNLARVVA
                     KTFVAERKKLGFPLLDEATRAELLKEDAE"
     gene            11430..13466
                     /locus_tag="U1021_001336"
     CDS             11430..13466
                     /locus_tag="U1021_001336"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEM4711877.1"
                     /translation="MTKNLLVELGLEEIPAYIVTPAMHQLRDRMATFLTDNRLAFDSI
                     DVFSTPRRLAVRVRGLADQQTDLTEDFKGPAKKIALDADGNFTKAAEGFVRGKGLTTA
                     DIEFREIKGEEYVYVTKHEAGQPAKAVLAGIPEVLKAMTFPVSMNWASNKFAYIRPVH
                     TLTVLLDDEALDMDFLDVSSARISRGHRFLGNETEIASADFYEADLRAQFVITDPAER
                     QNMIVEQIKAIEDKHNVTVEIDEDLLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTS
                     MKNHQRYFVVRDKAGKLLPNFISVRNGNDQYLDNVIKGNEKVLVARLEDGEFFWREDQ
                     KLKIADLVERLKVVTFHEKIGSLYEHMERTKVIAEKLADLAGLSAGEKADVARAADIY
                     KFDLLTGMVGEFDELQGIMGEKYALLAGEKPAVAAAIREHYLPNSAEGELPESKVGAV
                     LALADKFDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWEIPLDQLIAELYS
                     LNFASLTYDNQPAVMDFIRARVEKMMDKTIPKDIREAVLASSTFVVRLQLAASSAIFQ
                     KAKEADYKEAVENLSRVFNLAEKAEVTAIDEALFENDQEKALAAAVAGLELTEDMAGN
                     LDKLFALSPVIAAFFDNTMVMVDDATVKANRLALLKALADKASAVAVFNLLNSK"
     gene            13472..13909
                     /locus_tag="U1021_001337"
     CDS             13472..13909
                     /locus_tag="U1021_001337"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711878.1"
                     /translation="MSLFRIIELYVIIPLQAFVLIVLMFFFIRWMWRTSKIEKGNAKP
                     AIRKKCKQKLCTAETQGRFMRQLRFKKNYVYVYAYDVDGKTYEIYDVIIYRIGEVIKL
                     GPIPVSYTGKRQLENVDVVRIAYNPLIPQEAYLPDNQGKWTVF"
     gene            13928..14185
                     /locus_tag="U1021_001338"
     CDS             13928..14185
                     /locus_tag="U1021_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002901318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF896 family protein"
                     /protein_id="HEM4711879.1"
                     /translation="MEQAKIDRINELARKKKAEGLTEEELQEQAALREEYIEGYRRSV
                     RAHIEGIKVVDEDGNDVTPEKLRQVQREKGLHGRSLDDPNS"
BASE COUNT         3963 a         2701 c         3419 g         4186 t
ORIGIN      
        1 ttccatttca tcgcttctct gtctcctctt agagccattt ttactccttg tgactgtatt
       61 ttaaatggct gttcattatt gtaagcaaga tgtcacatac ctagacatct gctggattaa
      121 tgtcatgatg ggatgaaaaa tttatcatgt agtctttggg agtcacaggg catagaataa
      181 cccctgagct tgggcccagg gggagttttc taactataat gtttgaatag cgaatgagtt
      241 gcttgatgga tggtgcgggc cgtttcagca ttgttcatgg tataaagatg aacacctgcg
      301 acatcattgg tcactaagtc aacaatctga tctacagcat aggccagacc tgctgcgcgt
      361 agggattcag gattgtgctc gtatttttcc aagatggcct tgaatttacg agggaggcgg
      421 atattctcac aagttttcaa gagacgaagt gcctgattcc tgttgatgat aggcataata
      481 cctgcgataa taggtacttc gatgtctgct agagaacatt tctcctgaaa gttataaaat
      541 gcttcgttat cgaagaagag ttgagttacc aaggttgagc aaccggcatc aactttcttt
      601 ttcaaatttt tgatgtctga gacagaattt ggtgattctg gatgtacttc tggataacag
      661 gctccaataa tgtcaaaatg tggggcttct tccttgataa aggaaatcaa gtcagttgca
      721 tactggaagt cctctttagg gggaagacct tcaataatat cgccacgaag tgctaaaatc
      781 tgatgtacac caatttcatc gagagaatga agaacggatc ggaccttttc ttttgtcaag
      841 taagcagctg gcaaatgtgc gatagttgga atatgcaatt cattgcgaac atggttagcc
      901 aacttgacag tagtctcttc tacgttcaaa ttgttattgc tgcatgtaac actgataaaa
      961 tgaggggcca aaccttgcat ctcatcgaga gtttggataa tcttttcatt gcctacttct
     1021 ggttttggag gaaaaatttc aaatgagaga cttggggttt gaccaatcat aaattagagt
     1081 tcctttctgg ctgtcttagc tgcttgagtc aagtggataa gactagcttt tgtttctgat
     1141 tcgccacgag tcttgagtcc gcagtctggg ttaatccaaa ctttttcttt cggtacttta
     1201 gcaaggatgg cttgaatggt gtgtgcaatt tcatcaacgg cagggacacg tggagagtgg
     1261 atgtcataga caccaggacc tacctgagtt tggaagtttt tagccttgag ttcatctaga
     1321 ataacaagat ttgaacggct ggcttcaaag gagataacgt ctgcatccat attgtcgatg
     1381 gcaggaatga tgtcagtaaa ttcgctatag cacatgtgag tgtgaatttg tgtctctggt
     1441 gcaacagttg agtgaactaa tcggaaggct ggaatcgccc aatccaaata ttcactgtac
     1501 cagtcgctac gacgaagtgg taatttttca cgtaaagctg cttcgtcaat ttggataatc
     1561 ttgatacccg ctgcttcaag gtcaagaact tcttccttga tagcaagggc gatttgaaga
     1621 gttgattctt taatagaaat atcttcacga gggaatgacc agttgagaat ggttactggc
     1681 cctgtcaaca tacctttaac tggtttgttt gtacggcttt gtgcatagct tgaccattta
     1741 acagtgattg ggttcaagcg cgtcacatcc ccccagatga ttggtggttt taccccacgc
     1801 ataccatatg attggaccca tccgttctta ctgaagagat aaccagaaag gttttcaccg
     1861 aagtattcta ccatgtcgtt tcgttcaaac tcaccatgaa ccaagacatc gaagtcaact
     1921 tcttcctgcc atgcaatcca ttcgtctgtt tgagctttaa caaatgtatc gtattcttct
     1981 tctgagatat ttcctttgcg gaaagccaag cgtgtgctgc gaatttcttt tgtttgaggg
     2041 aaagatccaa tcgttgttgt tggaagaagt ggtaagttca atttctcacg ttgaatggct
     2101 tcacgttctg caaagactgg taggcgtgta tagtcagcgt ctgtcagtcc tgcaagacgg
     2161 tctgcgagca ctgtgtcacg accaactcgt tcaagggaga aaagttcctt gtttgctgct
     2221 agggctgtct caccttgtcc attgcgaatg gcatctaaat cacgcaattc gttcaatttt
     2281 tcaactgcaa aggcaaagtg gttgagaatt gcgggttcaa actcttcatt tgctgttgtg
     2341 aaaggcacgt gaagaagaga gcaagaagtt gttaggacga cattttcagc tggaatggca
     2401 tccagaatag ccaagctctt ttcataatgg ttacgccaga tatttttacc gttgacgata
     2461 ccagcgtaga gggtcttgtc agctgggaag cctgttgcaa caagtgcagc agtttcctta
     2521 ccttctacaa agtcaagacc gatggcatca actggtaggc tggtcaattc tgtgtaaata
     2581 tcacgaacat caccgaagta ggtttggata aggacttgca agcctttttt atctgccaag
     2641 agtgtttgat agatgttaag gaagagggct ttttcttctg cagtcaagtc cttgaccaag
     2701 ctaggctcgt ctaactggat tttttcagcg ccaagttctg ccaatttctc aaagacttgt
     2761 ccgtaggctg caactaagct atcagcgaaa ttagtagcag ttaaaccttc ttcaaaatca
     2821 gttaattgta agagtgtgaa tggaccaatc aaaactggac gagttgtgat acctaagttc
     2881 tttgcttctt ggaattcatc gaaaatctta tgaccggcta gtttgatttc tgtatctttt
     2941 tcaatagctg gaacgatata gtggtagttg gtgttgaacc attttttcat gggtctagca
     3001 cgaacgtccc ctttttctcc ttgataacca cgtgcaagag caaagtattt ttcaaggtca
     3061 gtcaagtcaa gattctgtac tgctttaggt acgatgttga agagaacagc cgcatccaaa
     3121 acattgtcat agtgggagaa gtcgttgctt gggatttcag taatgcctgc ttctttgaca
     3181 atagtccagt gcttggcacg caagtcctta gctgccgtca aaagttcttc ctgtggaatt
     3241 tcatttctaa agtatttttc agtgataaat tttaattcgc ggttttcgcc gatgcgtggg
     3301 aagccgataa tagttgtagt catgggattt cctccaaaat atttctatgc ccctatccta
     3361 acagaaaaaa cgactcttgt ataattgtaa aaaattagag ggagttataa cttttgacta
     3421 taacagattt aaagagagct acttttttga tatttcttcc atatgaaagc ttgaaaacac
     3481 gcctgtttat caggcttgac ttttttatgc tggctcaggt atagtttttc cctaagcgtg
     3541 atatagattt tatctataaa attgtcaaag gtaaaccctt gtttatgagc aattgtttat
     3601 aggtagttct gatagttatt ttttatcaag ccataaaact tctatattag acaggcttag
     3661 ttggtcatgt tacaatatat aaaatcgcag aaaggagttt cttatgggaa aagttatcat
     3721 tggaatttca ggaaacgagc aagaatttcc aaccaaatca ggtcgcgtat atgtaacggt
     3781 agcgcgtgaa ttggcagaca gcgttcgtca ggcaggtggt gtgccaatgg ttattcctat
     3841 gggaactcct gatctagcta aagactatat cgaaatgatt gacaagttga ttttgtcagg
     3901 tggtcagcat gtggatccaa gtctctacgg tcaaaaacgc ttgattgata gtgatgatta
     3961 cctcttggaa cgtgatgcat ttgagttagc tttgattgaa gaggcccttc ggcaaggaaa
     4021 acctattttt gccgtttgcc gtggcatgca gttgctcaat gttgctctag gtggtagttt
     4081 agagcaggaa gtggctgatc attggcaaga gggtatcgag ggaacatctc atcgtttaca
     4141 ggttaaaccg aagagtcgtg tcagtcagtt gttctctcaa ggtagctcca ttaattcttt
     4201 ccatcatcag cgaattaaag atttggcacc aggtttggtg gcaactggtc ttgatccgag
     4261 agatggtacg attgaagcct acgaaagtaa ggggaaacaa gctttgtttg gtatccaatg
     4321 gcatccagaa tttttataca atgattgtaa gcaacataga gacttgtttc agtatttagt
     4381 agatatattt taagaggggt atccctcttt ttattatcaa cgcttataat tgcaagggta
     4441 tttgttataa cgaaaagtta taactttcta taaaaaaagt caattagtca gaaagaaaat
     4501 tctgtgttaa gatagataca gttctaattt aaggagatca ttttatgaaa ttaaaaaaat
     4561 tgtttagttt ggcaacagct gctttatcag taggtgtact tgctgcatgt ggtagctcgt
     4621 ctactagctc ttcatccgat tcttcagcaa caactgttcg tgtgggtgtg atgagcttga
     4681 gcgattctga gcaagcccgt tgggataaag ttcaagaaat acttggggac gaagtgaagt
     4741 tggaattcac tcaatttaca gactattcac aaccaaacaa ggcagtagct gaaaacgaag
     4801 tagacatcaa tgctttccaa cactacaact tcttgaataa ctggaatgaa gaaaatggtg
     4861 aagacttggt tgctattgca gatacttata tcgcaccaat tcgtctttac tcaggtacag
     4921 ctgatggaag aaacaagtac actaaagtgg aagaaattcc agatggtgca gaaattgcgg
     4981 ttccaaacga cccaacaaac gaaagtcgtg ctctttacct tcttcaagca gctggtttga
     5041 tcaaggttgg tgtatctggt acagaattgg caactattgc tgacattact gaaaacaaga
     5101 aaaacttgaa gatcactgag ttggatgcaa gccaaacagc aagctcactt agctcagttg
     5161 atgcagcagt tgtaaacaac acatttgtgt tggaagctgg tttggattac aaaaatgccc
     5221 tttacaaaga gcaaaaagat gaaaattcaa aacagtggta caacttgatt gcagctcgta
     5281 gcgattggga aaaatcagag caagtagcag cgattaagaa aattatcgaa gcctaccaca
     5341 cggatgaagt gaaaaaagtt attgaagaga cttcagacgg tatggatgag ccagtttggt
     5401 aaaatgtaaa taggttgagg actgggcaga attgttcagc cctctatctg tttttataga
     5461 gataagaaaa aatctcttaa ccaaagtcag aaatgtggga gaatatttga ttttggttag
     5521 tagatttgat tgatttcatt gagtatgagg agaaagtatg gcagatagta aagttcaatt
     5581 atttgaaaat gatgcgatta ttcaaaccta ttttgaaaag ttgaaggtct tgatttcaaa
     5641 gaaatctatt tttgctcagc agattggttt gttggatgtg gcgacttact tgaaagaaat
     5701 gtttgaagaa gctggggcag atgttgtttt agacgacagc tatgccgcac catttgtcat
     5761 ggcaacgttt aaggcttcgg tgccagatgc gaaaacattg attttctaca atcattatga
     5821 tacagtacct gcagatgccg atcaggtctg ggagaagggc aatccttttg aattgactat
     5881 ttctgaaggt tatatctatg gtcgcggggt ggacgatgac aagggccata tcacagctcg
     5941 tctgtcagcc ttgaaaaaat atcaagctag acaagatggt cagctccctg ttaatatcat
     6001 ctttattatg gagggggcag aggagtcagc ttctgttgac ttggacaagt atctttcaaa
     6061 atataaagag tatttgattg gtgctgattt gcttgtctgg gagcaagggc atcgcaatag
     6121 cctacatcag ctagaaattg ctgggggaaa taaaggaatt gtgacctttg atcttcaggt
     6181 caaatcagcg gacttggata ttcattcttc ctatggtggt gtcattgatt cagcaagctg
     6241 gtatttgttg tcagctcttc aatccatgag agcggtagat ggacgcatct tggttgatgg
     6301 tatttacgag caagtgcaag agccaaatga acgtgaatta gccttagttg aggaatttgc
     6361 actggctacc agtcagtctg tgacggatat ttatggatta actcttccaa ccttggtaga
     6421 agatcgtcgt gagtttctga agcgtttgta ttttgagcca tcgattacca ttgaaggctt
     6481 gtcaactggc tatcttggtc aaggtgtcaa gaccatcata ccagctcagg cttctgctaa
     6541 gatggaagtc cgtctggtac ctgggttgga gccgcatgat gtattagata agattcgcca
     6601 gcatttggac aagcatggtt ttgataaagt tgaggttgtc ttcactctag gagagatgag
     6661 ctaccgaagt gacatgtccc accctgccat tgtcaatgtg attggattgg ccaaaaaatt
     6721 gacaccagaa ggagttgctg tcttgccgac gtcaccgggg acgggcccca tgcacaccgt
     6781 ctttcatgct ttaggagtgc cgattgcagg atttggtcta ggaaatgcca acagccgtga
     6841 ccatgccggt gatgaaaatg tcagcatcgc tgactactat agccatgttg aattagtaga
     6901 ggagttaatt gcaagttatg agtaaggaaa tgattaagct agataatatt gatgtaactt
     6961 tccagcagaa aaaacgtacg atcgaagcgg taaaggatgt gaccatccat atcaatcaag
     7021 gggatattta cggtatcgta ggttattctg gagcagggaa atctaccctt gttcgagtga
     7081 ttaatttgtt gcaggttccg tctgcgggta agattaccat tgatgaggat gtaatttacg
     7141 agggagaaaa ggtcacactt accccagctc aattgcggag caaacgccgt gaaattggca
     7201 tgattttcca gcatttcaat ctgatggctc agatgacgac agaagaaaac gtagcctttg
     7261 cccttaagca ttcgggtttg agcaaggaag agaagaaaga aaaagttgct aagttgttgg
     7321 acttggttgg gctttctgac cgtgctgaaa actatccagc tcagttgtct ggtggtcaaa
     7381 aacaacgtgt tgccattgcg cgtgccttgg ccaatgaccc taaaatcttg atctcagatg
     7441 agtctacttc tgccttggat ccgaaaacga ctaagcaaat tttggcactt ttgcaagaat
     7501 tgaatgaaaa attgggcttg accattgtta tgattaccca cgagatgcag attgtaaaag
     7561 acatttgtaa ccgtgtggcg gttatgcagg atggtcgctt gatcgaagaa ggttcagttt
     7621 tagaaatctt ctctcatcca aaggaagaat tgacacagga tttcatcaaa acagcaacag
     7681 gaattgatga ggccttggta aaaatttatc agcaagatat tgttcagaat ttgcctgaaa
     7741 atagtatctt agttcaattg aaatatgctg gttccaatac ggatacggcg attgtcaatg
     7801 atttgtataa attctatcaa gtgtctgcca atattcttta tggcaatatt gaaattttgg
     7861 accatacgcc agtcggtgag atggtggtga tcttatcagg tgaacctggt cagttgcacc
     7921 gtgcgattga ggcagtaacg gaggcgcgtg tggaagtgac gattttgaaa ggagcaaatt
     7981 agatgttaga atggattcaa acgaattttc cagatattta taaattgggc tgggatggtc
     8041 agacaggttg gttaacacat ttttatttga ccctctatat gacctttgtt tcctttgctt
     8101 ttggtggatt tatgggcttg gtgtctggtt tgttcttggt cttgacaggt ccacgtgggg
     8161 ttattgccaa taagactgta tattggattt tggacaaggt ggcttctatc ttccgtgcca
     8221 ttccttttat tatcttgttg gcagctattg ctcctttgac gaaaattatt gttggaaaaa
     8281 ccattggtac agaggcggct ttggtgccgc tcgccctttc agtctttccg ttctttgccc
     8341 gtcaggttga agtggtcttg tcagaattgg accgtggtgt cattgaggct gctcaggcat
     8401 caggtgcgac tttctgggat attgtccttg tctatctgcg tgagggtctg cctgacttga
     8461 ttcgtgtgac gacatttgcc ctggtttcct tggtcggcta tacagccatg gcaggagcta
     8521 tcggagcagg tggtttggga caggttgcac tctcctacgg ttacttgcgc tacaatgatg
     8581 atgtgacctt ccttgctaca ttcttgattt tggtcatcat ctttgccatt caattcattg
     8641 gtgatttctt gaccaggaag attagtcata gatagttatt tagctgtgtt ttttcaaatt
     8701 ttagatagtc cttgacttat ttaaagcatt tttatacaat aaatttaatt aaataaacac
     8761 tgccaccggg tagtcatgca acagcatttt atgaacgtcg ttaggtctta gaagatgttc
     8821 atagggtgct gatttttcta taaaaggagt gagaatatgt cacaatttgt tgttgattca
     8881 tctttttgga gtctatttcc agatgcaaaa attggagttc tattattgaa agattgtaaa
     8941 acgccggcgc aatcgcctga tgaattagtg aaattactgg aagaaagcaa cggaattgcc
     9001 cagaaatttc ttacggaaga tacctttagt gagaatgagg tcattcgtac atatcgtcaa
     9061 gcctatcaaa aatttaaaac aaaaaaaggc gcgcgttcta gtatcgaagc ccttttgaaa
     9121 cgttcaacta gtgaccgtcc agtcacaaca atttctccat tagtggacat ttataatgcg
     9181 gcgagtttac gttttggtct tccatgtggt gctgaagatt tagatacatt tgtaggcaat
     9241 ctccaactaa cggtcactga gggtggggat gaattctatc tcattggtga tgaaaccaat
     9301 aatccaactt taccaggtga agtttgctat aaggatgata aaggcgccgt ttgtcgctgt
     9361 ttcaattggc gcgatggtga gcgaaccatg attacggatg agacaaagaa tgctttcttg
     9421 gtcatggagt tggtcaattc tgatagagta gaagatttgg aaaatgccct agattttatc
     9481 agtcaacacg cagaaaaatt cttgggagta gtaccagaaa aatatctact agattgcgat
     9541 aggccagcaa tagccttgta ggatttgtca gcgggattgt gttcggataa atagtggtct
     9601 ttctagacaa atgctgattt ttctgctaca atactaagca tgaaagaagg ttgtttcaaa
     9661 agcctgtcta gcgagcttgg gagagtgaaa gccaagccag tcttgaaata attggcgctt
     9721 tcccagtcgt gaccatgtcc gactcaatca gaatcataca aatgaagtaa taaattaggg
     9781 tggaaccgcg ttctcaacgc ccctatgtct gttgacaggg gaagagaatg tggttctttt
     9841 tgtctgccga cggagtattt cttgtatttc atctcaaggt gaaagacagg tattgtaaag
     9901 aaaggagacc aatgttcacc ttagaaaata tcaatcacgg gcatgagcag tttactgggc
     9961 ctgattttcc caagctggtt gcctatttta aggacttggg catggtagaa aatacagtgg
    10021 atatccagtc tgggcaggtt acctatcgct cacagacagg gcagactctg gaaaagacgg
    10081 gctatcaagt aacgatacct attgctgacc aagtcaatcg tgaccagttt gtgactatct
    10141 tacgcaatca tcaggctgga caaacagatt tccccacctt ctgccaagaa acagcagaag
    10201 cagggattta caagtgggtc atcgacctag aagccatgac ctgctcctat ctggaccagg
    10261 cagagcaggc tgtctttgtg gaaaccgtac cgagtgtgga gaactagcca ttttgcaata
    10321 tatatagaaa gaggatgtta tgtcaaagaa acttactttt cacagcgtca gtggcatcgt
    10381 ctcctttcag tcgaattgcc acacgctcat cgctagggcg actgagctag acgctgtact
    10441 agttcgcctt tcctagcggt gtcggctagg aaggctcacg tcgcaatcaa tttatataga
    10501 aagaggaaat atatgtctaa aaaacttacc tttcaggaaa ttatcctgac cttacaacaa
    10561 ttttggaatg agcagggttg tttgctcatg caggcttatg atacggaaaa aggggcgggt
    10621 accatgagcc cttacacctt cttgcgtgcc atcggtcctg agccttggaa tgcggcttat
    10681 gttgagccaa gtcgtcgtcc agcggacggt cggtatgggg aaaatccaaa ccgtttgtat
    10741 cagcaccacc aattccaagt agttatgaaa ccatctccat ctaatatcca agaactttac
    10801 ttggagtctt tggagcgttt gggcatcaat cctttggaac acgacattcg tttcgttgag
    10861 gacaactggg aaaatccgtc tacaggttca gctggtctgg gctgggaagt ttggttggac
    10921 ggcatggaaa tcacgcagtt tacctatttc caacaggttg gtggtttggc gacaggtcct
    10981 gtcacagccg aagtaaccta tggtttggag cgtctggctt cttacattca agaggttgac
    11041 tctgtttacg atatcgagtg ggctgacggt gttaaatacg gcgaaatctt tattcagcca
    11101 gagtatgagc attcaaaata ttcctttgaa gtatccgacc aagatatgct ccttgaaaac
    11161 ttcactaagt ttgaaaaaga agcagagcgg gctttggaag aaggcttggt ccatccagcc
    11221 tttgactatg tactcaaatg ctctcatatc tttaacctgt tggatgcccg cggagctgtg
    11281 tctgtaaccg agcgtgcagg ctacattgcc cgtatccgta accttgcccg tgtcgttgcc
    11341 aagacctttg tggcagagcg gaagaaactc ggcttcccac ttttagacga agcaacacga
    11401 gcagaattgt tgaaggagga cgcagaataa tgaccaaaaa tttacttgtt gaacttggct
    11461 tggaagaaat tcctgcctac atcgtaaccc cagccatgca ccagttgcgt gaccgcatgg
    11521 cgaccttttt gacagacaat cgcttggctt ttgacagcat cgatgtcttt tcaacaccac
    11581 gccgtttggc tgttcgtgtg cgtggtttgg cagaccagca gactgatttg acagaagatt
    11641 tcaagggtcc tgctaagaag attgccttgg atgcagacgg gaacttcacc aaggcggctg
    11701 aaggttttgt ccgtggcaaa ggcttgacga cagctgacat tgagttccgc gagatcaagg
    11761 gcgaagagta tgtctacgtg accaaacacg aagctggtca gccagccaag gcagttttgg
    11821 cgggcattcc agaagttttg aaagctatga ccttcccagt cagcatgaac tgggcgtcca
    11881 acaaattcgc ctacatccgc cctgtccaca ccttgaccgt tctcttggac gatgaggcat
    11941 tggatatgga cttcttggac gtttcgtcag ctcgcatcag ccgtggtcac cgtttccttg
    12001 gaaatgaaac tgagattgca agtgcagatt tttacgaggc tgatttgcgt gcacagtttg
    12061 tcattacaga ccccgcagag cgtcaaaata tgatcgtcga gcaaatcaag gctatcgagg
    12121 ataaacacaa cgtgacagtc gaaattgatg aagatttgct taatgaagtt ctcaacttgg
    12181 tcgagtatcc aactgccttc atgggttctt ttgatactaa atatttggaa gtaccagaag
    12241 aagttttggt aacttccatg aaaaaccacc agcgttactt tgtagtgcgg gataaggctg
    12301 gcaagctttt gccaaacttc atctccgtcc gaaacggtaa tgaccagtac cttgacaatg
    12361 tcattaaagg aaacgaaaaa gtcttggtgg cccgtttgga agatggtgag ttcttctggc
    12421 gtgaggacca aaaactcaag attgctgact tggtagagcg actcaaagtt gtgaccttcc
    12481 atgagaaaat cggctcactt tacgagcaca tggaacgcac caaagttatc gcagaaaaac
    12541 tggctgactt ggcaggtttg tctgcgggtg aaaaagcaga tgtggcgcgt gcggcggaca
    12601 tctacaaatt tgacctcttg acaggcatgg tcggtgagtt tgatgaattg caagggatta
    12661 tgggtgagaa gtatgccctt cttgcagggg aaaaacctgc ggtggcagcg gcaatccgtg
    12721 agcactactt gccaaactca gcagaaggcg aattgcctga gagcaaggtc ggtgcggtcc
    12781 tggcactggc tgataagttt gacaccctcc tatccttctt ctcagttggc ttgattccgt
    12841 ctggttcaaa cgacccttac gctcttcgtc gtgcaacaca gggtatcgtg cggattttgg
    12901 aagcatttgg ttgggaaatt ccattggatc agttgattgc ggagctctac agcttgaatt
    12961 ttgctagctt gacctatgac aaccagccag ctgttatgga ctttatccgt gctcgtgtag
    13021 agaagatgat ggacaagacc attccgaaag acatccgcga ggctgtactt gccagctcaa
    13081 cttttgtggt cagactgcaa ctggcagcca gctctgctat tttccaaaaa gcaaaagagg
    13141 ctgactacaa ggaagccgtg gaaaacttgt cacgtgtctt caacttggct gaaaaggcgg
    13201 aggtgactgc gattgacgag gccctcttcg aaaacgacca ggaaaaagcc cttgctgctg
    13261 cagtggcagg cttggagttg acagaagata tggcgggcaa cttggacaag ctctttgctc
    13321 tcagcccagt catcgcggcc ttcttcgaca ataccatggt tatggtagat gacgcaacag
    13381 tcaaagcaaa tcgcttggct ctcttgaaag ccttggcgga taaggcaagt gctgtggcgg
    13441 tcttcaatct cttgaatagc aagtaggtag tatgtctctt ttcagaatta tagagttgta
    13501 tgttatcatt cctttgcaag cttttgtgct gattgttctt atgtttttct ttattcgttg
    13561 gatgtggcga acatctaaga tagaaaaggg taatgctaaa cctgctattc gcaaaaagtg
    13621 caaacagaaa ctttgtactg ctgaaacgca agggcgtttt atgaggcaat tacgttttaa
    13681 gaagaattat gtctatgttt atgcttatga tgtggatgga aaaacctatg aaatttatga
    13741 tgttattatt tataggatag gtgaagttat taagttaggt ccaattccgg ttagttatac
    13801 aggaaaaaga caattagaga atgttgatgt agtgagaatt gcctataatc ctctgatacc
    13861 acaggaagcg tatttaccgg acaatcaagg gaagtggacc gtgttttaag agataaaagg
    13921 agttattatg gaacaagcaa aaatcgatcg gatcaatgag ctggcccgca agaaaaaagc
    13981 agaaggcttg acagaggagg agttgcagga acaggcggct cttcgtgagg agtacatcga
    14041 gggctaccgc cgtagtgtgc gtgcccacat cgaaggtatc aaggtcgtcg atgaagacgg
    14101 caatgatgtg acgccagaga aactccgtca agtccaacgt gaaaaaggtt tgcatgggcg
    14161 tagtttggat gatccaaatt cctaagaata aatgataata aacaaggaaa gactaggttt
    14221 tctagtcttt tttgtgcttg tagcctactt acaataacga attactcga
//
LOCUS       DASFQD010000059        13829 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.059, whole genome shotgun sequence.
ACCESSION   DASFQD010000059 DASFQD010000000
VERSION     DASFQD010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 13829)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13829)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13829
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.059"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..504)
                     /locus_tag="U1021_001339"
     CDS             complement(<1..504)
                     /locus_tag="U1021_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016182753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4711880.1"
                     /translation="MKSKLGITLRKIRKGKQISLCSIADSNLSKSQISRFERGESEIS
                     CIRLINILDKLHITLDEFIILHDNNSTKTGSFANLVQYIRKHYSTKNFDSIIELLSNS
                     SSYNLNRYEKTMVKSILYTTNKNFLPSDEELLQLTDYLFKVENWGYYEIILLGNCVRT
                     IKYNSYFL"
     gene            640..1266
                     /locus_tag="U1021_001340"
                     /pseudo
     CDS             640..1266
                     /locus_tag="U1021_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003069266.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
     gene            1256..2452
                     /locus_tag="U1021_001341"
     CDS             1256..2452
                     /locus_tag="U1021_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000353935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM4711881.1"
                     /translation="MDINKKTFYTITFGEFISNIGDRFQKIAFPILIYKEFHSSFAMG
                     GMVIIELLPQLLLGFVMGYLLDNFNKKKILLWSTFIPAVLCSLIPLFSKYSVSIFFYY
                     IIAFLLPLFSTLFQTGFSVITPALFEKKELQKYNSQFQGVRTISKLISPALAGLLMLK
                     FNINSIFFINSASFLLLFLSILISYIPNQVKKEDGNDDMKEIFTGFKENFTNIRLRVS
                     LLFTIVVNIAMLGFNATIVYYLQDQLKLSNSLVGLVYSIAGFGSLIAVTILSTYLKKK
                     DTFILMNISMMTIPLVIMASGIVENWIFFGICYSILSGLITIASVSITTIQQQESTEY
                     NIGKILSSSFVIATIFAPLGGILAAYFNWLLTPRFSFVILGLLSSLFVIFIKKYEKNL
                     KEERRK"
     gene            2449..3038
                     /locus_tag="U1021_001342"
                     /pseudo
     CDS             2449..3038
                     /locus_tag="U1021_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003069261.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3064..3149
                     /locus_tag="U1021_001343"
     tRNA            3064..3149
                     /locus_tag="U1021_001343"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3096..3098,aa:Tyr,seq:ata)
     gene            3226..4185
                     /locus_tag="U1021_001344"
     CDS             3226..4185
                     /locus_tag="U1021_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001028644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEM4711882.1"
                     /translation="MDIVVLYGGRSPERLISEVSSRQIAEALTTDNVIRLNLNGIYNF
                     ENKEVKHFSELYKLYQEGSLSEFEIDKSAEITDSVIEICKLADIVFLSTHGGIGENGK
                     LQALLDICNIKYTGNGYQSNAISLDKKLSKRLVSTVGIKTPYEYIEENKFVFPLVIKP
                     NDSGSSIGVQIIKTKEELQQFDLENYNIEEYINGREISIGVIGEKILQPIEIVIEGGF
                     YDYEKKYTPGVVKEICPANISEELKKRLEIYAKTVHDLMGFEVYSRSDFIIDDNGEIY
                     FIETNSIPGMTPTSLLPKEAEAEGINFSNLCKKIINLSIKKYN"
     gene            4366..4590
                     /locus_tag="U1021_001345"
     CDS             4366..4590
                     /locus_tag="U1021_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000284847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4711883.1"
                     /translation="MYQRIRDLREDHDLTQKFVANLLSFSHTNYAKIERGEVALTADV
                     LVQLSKLYNVSTDYLLGLTDCPDRIKHKIK"
     gene            4860..5108
                     /locus_tag="U1021_001346"
     CDS             4860..5108
                     /locus_tag="U1021_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003106749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3173 family protein"
                     /protein_id="HEM4711884.1"
                     /translation="MKTVTYKNLMNIGFPEHTARNIIREAKRIAVKKFEEARKVDHNA
                     VQLSKSPFDNRRLGIAPKDIVEELIGISLSEDNLESEN"
     gene            5111..6310
                     /locus_tag="U1021_001347"
     CDS             5111..6310
                     /locus_tag="U1021_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003106750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4711885.1"
                     /translation="MAIKNQKKYKGVYCDKNGKIFYQADLGVDPVTGKRVQKKARKNQ
                     YGKPFTTMKEAYDELVRIRYEFNNNLSIENYNITFESYMNTIYLRAYKQKVQAVTYKT
                     ALPHHKLFIQYFGSKPLKGITARDCESFRLHIIEHYSENYAKNLWSRFKACMGYAERL
                     GYISSMPCKSLDNPRGKHPDTPFWTYIEFQNFIKSFDLQDYEELQRFTTIWLYYMTGV
                     RVSEGLSLWWEDVDFEHKFLKVHTTLEKNENGNWYRKDQTKTPAGERLIELDDVTISV
                     LENWRKNQVANQDTDFIISRFGEPFCKSTICRIIKRKAKEVGVPVITGKGLRHSHASY
                     LINVLQKDILYVARRMGHADKSTTLNTYSHWFNALDKTVSEEITQNVISAGLDSILCQ
                     NPCQTHN"
     gene            6495..7246
                     /locus_tag="U1021_001348"
                     /pseudo
     CDS             6495..7246
                     /locus_tag="U1021_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646823.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
     gene            7442..8776
                     /gene="trmFO"
                     /locus_tag="U1021_001349"
     CDS             7442..8776
                     /gene="trmFO"
                     /locus_tag="U1021_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HEM4711886.1"
                     /translation="MSQTHINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKPTPQHK
                     TDKFAELVCSNSFRGDSLTNAVGLLKEEMRRLDSIIMRTGEAHRVPAGGAMAMDRENF
                     SQAVTDEIHNHPLIEVIRGEITEIPEDAITVIATGPLTSDALAEKIHALNGGDGFYFY
                     DAAAPIVDSSTINMDLVYLKSRYDKGEAAYLNAPMNKEQFNAFYEALISAEEAPLNSF
                     EKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPEDYKGPRDGEYKTPYAVVQLRQ
                     DNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQT
                     FATKKNPNLFFAGQMTGVEGYVESAASGLVAGINAVRRFHGEEPVIFPQTTAIGALPF
                     YITHTESKHFQPMNVNFGIIKELDGPRIRDKKERYEAIAERSLKDLEEFLTV"
     gene            8853..9688
                     /locus_tag="U1021_001350"
                     /pseudo
     CDS             8853..9688
                     /locus_tag="U1021_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636394.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            9753..10757
                     /locus_tag="U1021_001351"
     CDS             9753..10757
                     /locus_tag="U1021_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding domain-containing
                     protein"
                     /protein_id="HEM4711887.1"
                     /translation="MHHNTWKGIILQKQGLLNPQSVQQICQNLNGLQAQFQPYVHVGF
                     RNRMTAEDFHEGSWQEELTRQWSIRRTVHAYLESEIPLYIHEGRLVSTDYLKTEGRDG
                     FSPQTKQKYHHLILEALEQGPMTREDLKVLCREEKMTQKEEKLVFNAWGGLFRYMVER
                     GEVYQEYGAKRFHRLTDFQPLSREKAELEIARRYFSGFGPVSLADARYYFKENKSTIL
                     EWMAQLDLKTIQVAGEERFYLGVLDEADLPQCLFVAGFDQLLLGYEKKANPFFNPKYI
                     RNIYTLTGIIKPVVFYKGRFVATWKRDKGTILLDIFEDITQQEEKELDHYRQMYEKIL
                     "
     gene            10871..11698
                     /locus_tag="U1021_001352"
     CDS             10871..11698
                     /locus_tag="U1021_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM4711888.1"
                     /translation="MNKSYFYLDMRTHELDVPFTGRKRRVRVLLPKGYAENTEETYPV
                     VYFHDGQNVLYSKEAFSGHSWKVIPTIKRNPDIAKMIVVAIDNDGADRMHEYAAWKFS
                     EMGISGVQFGGKGTLYAEFVMDVVKPFIDQEYRTKSDKVHTAMIGSSLGGNITQFMGL
                     AYQNQIGCLGVFSSANWLHQDAFDRYIERQQLDSDQRVYIYVGTEEADDTDKTLMAGN
                     IKQAYINSSLSYYRQLIAGGVKLDNITLEVVSGAVHNEEVWALYLPACLRFLSEHWS"
     gene            11729..12475
                     /locus_tag="U1021_001353"
     CDS             11729..12475
                     /locus_tag="U1021_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002909732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HEM4711889.1"
                     /translation="MHVEFLSHWSGNLGREMNLNRYGHAGIPVVVFASSGGSYNEYAD
                     FGMIEACRGSIEAGHVQFFTLTSFDNESWLADWKSIHDKAEAHRAYERYVIEEAIPFI
                     KHKTGWFDGMMTTGCSMGAYHALNFFLQHPDVFIKVIALSGVYDARFFNNNQDYGNDD
                     VVYQNSPSDYIWNQNDGWFIDKYRQADIIVCTGLGDWEQDGLDSFYNLKRAFEEKNIP
                     AWFDTWGTDVAHDWVWWRKQMPFFLHSIGL"
     gene            12493..13659
                     /locus_tag="U1021_001354"
     CDS             12493..13659
                     /locus_tag="U1021_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase large subunit"
                     /protein_id="HEM4711890.1"
                     /translation="MNYLVISPFYPENFQPFTIELAKKEGVTVLGIGQEPYDQLPEEL
                     RNALTEYFRVENLENLDEVKRAAAFLIYKHGPIDRVESHNEHWLENDAALREQFNIFG
                     AKPKHLKKTKFKSEMKKYFKKAGVPVVPGVVVKSERDFGRALKNVGFPMIAKPDNGVG
                     ASDTFKIENKEDFDRFVETWDGATIYFLEKFVNSSIITTYDGLLGHEGNVVFETGLTY
                     VHTPLELMLSRKDNAYFIEKELDPQLVKYGRAIITAFGMKERFFHIEFFKNGKDYIAI
                     EYNNRMAGGFTVEAYNYAHSIDLFRDYANIVTDIDVEERRFDSQYCLVATRRDTTEYV
                     HSADDIHQRFAGKIKTVKRMPDAFAELQGNDAYLLVTESKKELDEMIAYIGLTK"
BASE COUNT         4484 a         2227 c         2822 g         4296 t
ORIGIN      
        1 taggaagtag gagttatatt taattgttct tacacagtta cctaatagga taatttcata
       61 gtaaccccag ttttcaactt taaaaagata atctgttagc tgtaataact cctcgtccga
      121 ggggagaaaa tttttatttg ttgtatagag aatcgatttt accattgtct tttcataacg
      181 attcaagtta taacttgaag agtttgatag taattcaata atactatcaa aattttttgt
      241 ggagtagtgt tttcgaatat attgcaccaa gttagcgaat gatccagttt tagtagaatt
      301 attgtcatga agaataataa attcgtccaa agttatatgt aatttatcta aaatattgat
      361 tagtcgaata caagagattt ctgattctcc tcgttcaaat ctagagattt gagatttaga
      421 caaattacta tcagcaattg aacataaact gatttgcttt ccttttcgaa tttttctgag
      481 tgttatacca agttttgatt tcatatttcc cattttccca acaaaatttc aaaggttttt
      541 tatttattat acaataaata aaaaataaag ggaggttcag tatgaaaaaa cttttaaaat
      601 ttagcaaatt tacatcaata ttgttattga ttatggatat taaatataac aactccaaaa
      661 acttttaagg tagatggttt aatgagtatt gacaatatag aaaaatttat aattggtaat
      721 caaatgaaat ttccattagt agttaaacca agatttttga gtggatcaag tcatggagta
      781 aataaagtca attctttaca agaaattcaa aaagatttac cgaatctttt ggagattgat
      841 aatcatttgg ttatccaaga atatatcgaa ggaaatgatt acatagtagc tgctattttt
      901 caagatgata gagtcaatgt agggatttct agagctaaaa ttaataaaga tatcaatttt
      961 aaagaaagat atataagtgg tgaagatatg tttattgttg atgacctacc agagagaata
     1021 aattctaaaa tagaattata tactcaactt attttggatt attatgaaat agatggtact
     1081 tgttatcttg attttagagt atctggcgag gatgtatatt tcattgagtt aggaactatg
     1141 tatggtttaa gtgaaaatag tgcggtacca actcttgcaa agaagtttgg aataagtctt
     1201 accgatttaa taaaaagtga tattcatcgt ggtttaacta gaaggaaggg acattttgga
     1261 tattaataag aaaacgtttt atacaattac ttttggtgag tttatctcaa atataggaga
     1321 tagatttcaa aaaattgctt ttcctatttt aatttacaaa gaatttcatt cgtcatttgc
     1381 aatgggagga atggtaatta ttgaattgtt acctcaactc ttattagggt ttgttatggg
     1441 gtacttatta gataatttta ataagaagaa aatattacta tggtctacgt tcataccagc
     1501 agtattatgt agtttaatac cgttattttc taaatattcg gtttctatat ttttttacta
     1561 tattattgca tttttacttc ctttattttc tacacttttc caaacaggtt tttcagttat
     1621 tacccctgct ttgtttgaaa agaaagaatt gcaaaaatat aattctcagt ttcaaggtgt
     1681 tcgaactatt tcaaaattaa tttctccagc tttagcgggg ttattaatgt taaagtttaa
     1741 tattaatagt atttttttta taaatagtgc atcattcttg ttgttgtttc tttcaatatt
     1801 aatttcatat attcccaatc aagtaaagaa ggaggatggt aatgatgata tgaaagaaat
     1861 ttttacagga tttaaagaga attttacaaa tattagattg agagtttctt tactatttac
     1921 catagttgtg aatattgcta tgctaggctt taatgcaacg attgtttatt atttgcagga
     1981 ccaattaaag ttatcaaata gtcttgttgg tttagtatat tcaatcgcag gatttggaag
     2041 tttgatagca gtaaccattc tttctaccta tttgaaaaaa aaagatacct ttatattgat
     2101 gaatatatca atgatgacca taccacttgt tattatggca agtggcatag tagaaaattg
     2161 gatatttttt ggaatctgtt attcaatctt gagtggattg atcacaatag cttctgtatc
     2221 aattacaaca atacagcaac aagaaagtac tgaatacaat attggaaaaa tactgtctag
     2281 ttcatttgta attgctacca tttttgctcc cttgggaggt atattagctg cttactttaa
     2341 ttggctttta acaccacgat ttagttttgt tattttgggt ttactaagta gtttgtttgt
     2401 tatttttata aaaaaatatg aaaaaaactt aaaggaagaa agaagaaaat gagtgaacaa
     2461 tacttatcgt tattaaaaga gtttccctct gaaaccaccg aaataagaag tagtacaact
     2521 gtgattggat tgtgtaaaga tgaatataat gctattgcta aagtttattc ctctaaaaga
     2581 aattgtcaat tttctgaatt acaatccatt atagaaatat tcgaatattt agaatcatca
     2641 aattccaaaa agttataatt ttttcaggat cctataactt aaattatgaa actctaggtg
     2701 gaattactga aatttctttg aatagaggta ttgatgttgg atattttacg gggcataatt
     2761 ttaaagaggt agtaaatttt gcgattaaaa atttgaaatt tagcatgcaa aagaaatcta
     2821 gttatacttc tttaaacgta gtaccacgaa gagagtcaaa cattagagaa tttaattctc
     2881 taatgtcaat gtattcatca catcttacag tagatttact ttgtaaaaga aggtcagcat
     2941 tacttgtttt tggtggagga agactagacc agttagctgt aggaaaaaat ataatattat
     3001 gtgatagtaa aataaaaaca tcgaaagagg ttttacatat aattaattca taaataattt
     3061 atccgaggtt ggcgaaattg gtaaacgcgc ctatgataca ggtaggttcg actaaatgtc
     3121 tattggaggt tcgagtcctt caccccgcat ataagatatt tgtgaattac agtaaaactt
     3181 ttataatggg ttttactgtt ttttaatttt attgaggtaa atcaaatgga tattgtagtt
     3241 ttatatggtg gtaggagccc agaacggtta atttcggaag tttcttcaag acaaattgct
     3301 gaagcgctaa ctaccgataa tgtaattaga ctaaatttaa atggaatata taattttgaa
     3361 aataaagagg taaaacattt ttctgaatta tataagttgt accaagaagg tagcctatca
     3421 gaatttgaga tagataaatc tgctgaaata acagattcag ttattgaaat ctgtaaatta
     3481 gcagatatcg tcttcttatc tacacatggg gggattggtg agaatggaaa gttgcaggcg
     3541 ctactggata tttgtaatat aaagtatact ggtaacggat atcaaagtaa tgctataagt
     3601 ttagataaaa aattatcaaa gcgacttgtg agtacagttg ggattaaaac tccctatgag
     3661 tatattgagg aaaataaatt tgtttttcca ttagtaataa aaccgaatga cagtggttca
     3721 agtataggag ttcaaattat caaaacgaaa gaagaacttc aacagtttga cttagagaat
     3781 tacaatattg aagaatatat aaatggaaga gagatttcta tcggagttat tggtgaaaaa
     3841 attttgcaac caattgagat tgttattgag ggtggttttt atgattatga aaaaaaatat
     3901 actcctggag ttgttaagga aatttgtcct gcaaatatat ctgaagagct aaagaaaagg
     3961 ttggaaatat atgctaaaac agttcatgac ttaatgggat ttgaagtata ttcacggtca
     4021 gattttatta ttgatgataa tggtgaaatt tacttcatcg aaacgaatag tatacctggt
     4081 atgactccaa ctagtttact tcctaaggaa gccgaggcag aagggataaa ttttagtaat
     4141 ttatgcaaga aaataattaa tctcagcata aaaaaatata attaaagacg actatatatt
     4201 ctaaggatgc attctatata ctgtttgcaa gataataatg tatgaagtac cactagtata
     4261 cttacttaaa tttgaaataa tatagtacaa attttactgt catattatga caatttccca
     4321 gcttttttct gaaagtgaca tatacttttc ttaggagaaa gctagatgta ccaacggata
     4381 agagatttga gggaagatca cgatctcact caaaagtttg ttgcaaattt actttccttt
     4441 tctcatacaa attatgcaaa aattgagaga ggagaggttg ccttaacggc agatgttctt
     4501 gtgcagcttt ctaaactcta taatgttagt acagattacc tattagggtt aacagattgc
     4561 ccagatagga taaaacataa aataaaatag tctctccttg atttgttcat tgacaattga
     4621 ataaaccgag gtgggacttt cttatttgtc gagcaattta gtgagatacg ccgtgatagg
     4681 agcgaaaatt attagctata aaatagagtg gttctctatc tgccatgacc acaaataagg
     4741 acaatgatac ttctgaacgt tcaggctgcc agcgtaaaag gacagcgggt gagacgccca
     4801 tgagtgattt aaccaatcat acctactgag gaaataattt ttttgacagg agtggaggta
     4861 tgaaaacagt aacatataaa aacttgatga atattggttt tcctgaacat acggcaagaa
     4921 acatcattag agaagcaaaa agaatagcag taaaaaagtt tgaagaagct cgcaaagttg
     4981 accataatgc ggtacaatta agtaaatcgc cctttgacaa tagaagactt ggtattgctc
     5041 ctaaagatat agtagaagag ttaatcggaa tttcactctc tgaagacaat ttagaaagtg
     5101 agaattgaag atggctataa aaaatcaaaa aaagtataaa ggtgtttatt gtgataagaa
     5161 tggcaagata ttttatcagg ctgatcttgg tgttgatcca gtaacaggga aacgagttca
     5221 aaagaaagct agaaagaatc agtatggtaa gccatttact acaatgaaag aagcgtatga
     5281 tgaactggtt cgaattaggt atgagtttaa taataacctt agtattgaaa attataatat
     5341 aacatttgaa agttatatga ataccattta tctaagagct tataagcaaa aggtacaagc
     5401 tgtaacttat aaaactgctt tgccacatca taagttattt attcagtatt ttggctctaa
     5461 acctttaaaa ggcataacag ctagagattg tgaatctttt agattgcaca tcattgagca
     5521 ttattctgaa aattatgcaa agaatttatg gtcacgattt aaggcttgta tgggatatgc
     5581 tgagagatta ggatatattt catctatgcc atgcaagtcg ttagataacc ctagaggcaa
     5641 gcaccctgat actccatttt ggacttatat tgagtttcag aactttatta aatcatttga
     5701 tttacaagat tacgaagagt tacaaagatt cacaactatt tggttatatt atatgacagg
     5761 tgttcgtgta agtgaaggtt tatcgttatg gtgggaagat gtcgattttg aacataaatt
     5821 cttgaaagtt catacaacct tagagaagaa tgaaaatgga aattggtatc gtaaagacca
     5881 aaccaaaaca cctgctggag aacgcctcat tgaactggat gatgtgacaa tatcagtatt
     5941 ggaaaattgg cgaaaaaatc aagttgccaa tcaagataca gatttcatta tttcacgatt
     6001 tggtgaaccg ttttgtaaat caacgatctg tcgaattatt aagagaaaag ctaaagaagt
     6061 tggagtacca gtgataacag gaaaaggatt gcggcacagt catgcttcct atctcataaa
     6121 tgttttgcag aaggacattt tatatgtggc cagacgaatg ggacatgctg ataagtctac
     6181 aactttgaat acctacagtc actggtttaa tgcattagat aaaacagtat cagaagaaat
     6241 aacccaaaat gtaattagtg caggactaga ttccatttta tgccaaaatc cctgccaaac
     6301 tcataattaa ggctagaaag cctattatac cgcccacaga gtaacgtatg ttattgttac
     6361 tcttaaataa tagagtttcc aatcaaaata aaaacctatc acttaatgtg gtaggttttt
     6421 tcgttctatt gttgcaaacg ttttcgttgt ggggtataat ataaaaaatg atgtctaaag
     6481 attaggagaa agacatgaaa agttacaaaa actatatctt cgatttttat ggtacattgg
     6541 ttgatattcg tacagatgag aataaactag aggtctggaa tcagctaaca cagatttaca
     6601 atgcttttgg ttgttcctat cgaccgcgcc agttgaaaaa tgcctatcat cgttttgtag
     6661 aagaggcaga gagctctctc gcggaaacag tgagttatca gtatgtcgaa attgatttag
     6721 aaacaatctt cattcgtcta ttaacggatg caccaaatga aaaccaaagt accaataagc
     6781 cgactgattt agagactttt ggacaagtag tagccacgat tttccgcgtg ctttttcacg
     6841 tgaaaagtta gaggcttatg aaaataccct aactagtcta cagacattaa aggacagaga
     6901 agtgcgatta tttattctct ccaatgctca acgaattttt actcaggcag aaattgaaca
     6961 gacaggttgt gctgatttga tggaaaaaat ttatatctct tctgacttta agatgaagaa
     7021 gcctgaacca gcatttcttc aactggtttt agaggaaaat aatcttgatg ttgaggaaac
     7081 ggttatggtt ggtaatgatt tgacatccga tatagctatt gctcatgaat tgggaatgga
     7141 ttccattttg ctgaatactt tcccgtatag tcaggaagaa atcgactctt ataggagact
     7201 tggttggaat tttgaggttg ttggagatat agcggagcta ttgtaaataa gcgatagaac
     7261 agtaaaggat atacataaaa tatattatgt aaaaaggtga aactactttc atttcaatga
     7321 aggtagtttt gtcctttcta gccattttct ggtatactag ataggtataa aatttagaaa
     7381 ggttctgttt ttgggtattc ccaaacagta gtcagatatt ctggctagag gtattagttt
     7441 catgtctcaa acccacatta atgttatagg agctggcttg gctggctcag aagctgctta
     7501 tcagattgcc aaacgtggca ttcctgtcaa actctacgag atgcgtggtg tcaagccgac
     7561 tcctcagcac aagacggaca agtttgcgga gttggtttgt tccaattcat tccgtggtga
     7621 tagtttgacc aacgctgtcg gccttcttaa ggaagagatg cgtcgtttgg attccattat
     7681 catgcgtact ggagaggctc accgtgttcc tgctggaggt gccatggcca tggatcgtga
     7741 gaatttctct caagcggtta ctgatgagat tcacaatcac ccgctgattg aggtcatccg
     7801 tggtgagatt accgaaattc ctgaagatgc tattacagtc attgcgacgg ggcctttgac
     7861 gtctgacgcc ttggcggaga agattcacgc gcttaatggt ggtgacggtt tttacttcta
     7921 cgatgcggca gcaccgattg tcgacagctc gaccattaac atggacttgg tttatcttaa
     7981 gtctcgttac gacaagggag aggctgccta tctcaatgcc cctatgaaca aggagcagtt
     8041 caacgctttc tatgaggcct tgatttcagc cgaggaagca ccgcttaact cctttgaaaa
     8101 agaaaaatac tttgaaggct gtatgcccat tgaagtcatg gccaaacgtg gtatcaaaac
     8161 catgctctat ggcccaatga agccagttgg tctggaatat ccagaagatt acaagggacc
     8221 acgtgatggc gaatacaaga caccttacgc agttgtccag ctccgtcagg ataacgcagc
     8281 aggtagcctt tacaatattg ttggcttcca gactcacctt aagtggggcg agcagaagcg
     8341 ggtcttccag atgattccag gactcgaaaa tgctgagttt gtccgctacg gcgttatgca
     8401 ccgcaattcc tacatggatt cgccaaactt attggaacag acctttgcga ccaagaaaaa
     8461 tccaaatttg ttctttgcag gtcaaatgac aggagtagaa ggctatgtcg agtctgccgc
     8521 ctctggctta gtagccggta tcaatgctgt tcgccgtttc catggcgaag agccagtcat
     8581 cttcccacag accacagcca tcggagctct gccattttac atcacccaca ccgaaagcaa
     8641 gcacttccag cctatgaatg tcaactttgg tatcatcaag gagctggacg gaccgcgtat
     8701 ccgcgataag aaggagcgtt atgaggcaat agcagagcgt tccctcaagg acttggaaga
     8761 gtttttgacg gtttaagccg atagttttcc gacgaaaagt atcgggaaaa cttggatggt
     8821 agatggtaaa ctgataggga aaggggaagt tgatgataaa agagttcaat gcaaccgtac
     8881 gttacctaga gtccttttag aaagcgaaat cgatgaacgg gaatttttgc gcatatcagg
     8941 atattccgtt cccatgttta gtcgtctctt ttcgattctg acagatatgt ccttgtcaga
     9001 atacgttcgg ttacgaaagt tgacgcgagc tgctatggac attcgtgaag gacaggcaaa
     9061 gattatagat atagccctta aatatgggta tgaatcttcg gattcttttg cctttgcctt
     9121 caaacaattt catcagattt ctcctagtca agtgcgtaag gggttgcctt ttaaggtcct
     9181 cttacccttg caactatcat taaccatcca aggaggtaaa gaaatggatg ttcgtattga
     9241 aaagaaggct ggttttacag ttgctggact tcttcgcaca gcaatcagta acgaagtgtg
     9301 tccgcaggta tgggaagact tgttcaagaa ccatacttat gaagagttag ctgctctagg
     9361 aagtgggcag tcctttggag tttgtacatt agctcaagcg gacgagacga ttaattatat
     9421 ggctgcttat gatgtcacag atagtgaaaa agcgactaag ttaggcttag aacttcttga
     9481 tgttcacgaa gctgactatg ctatttttac cctaacaggc cctgttcctc aatctattca
     9541 tgcaggatgg cgttatgcgc tagaaacttt ttttcctgaa cacggctatc gccattcagg
     9601 tgcaccagat tttgagtact attttgaagg agacatgagt tccccagact accaaatgga
     9661 actctggatt cccattgtga aagcataatg tacaggacac cttcgggtgt cttttgtgtt
     9721 atactgggat tagaaagcgg aggagaaata cgatgcacca caatacttgg aagggaatta
     9781 ttctgcagaa acaaggtctg ttgaaccccc agtctgttca acaaatctgc caaaatctca
     9841 atggtttgca ggctcagttt cagccctatg ttcatgtcgg atttcgtaac cgtatgacag
     9901 cggaggattt tcatgagggt agctggcagg aggaactgac tcgtcagtgg tccattcggc
     9961 gaacggttca tgcctatctc gagtcggaaa ttcctctcta tatccatgag gggcggctgg
    10021 tcagcaccga ttacctcaag acagaaggac gggacggttt tagtcctcag accaagcaga
    10081 aatatcacca tctgatttta gaagcccttg aacaaggtcc tatgacccgt gaggatctca
    10141 aggtcctttg ccgagaggaa aagatgacac agaaagagga gaagctggtc tttaatgcct
    10201 ggggcggtct ctttcgctac atggtcgagc gtggggaagt ctaccaagag tacggtgcca
    10261 agcgttttca tcgtctgaca gactttcagc cactttctcg ggaaaaagct gagctggaaa
    10321 tagcacgtcg gtatttttca ggctttgggc cagtcagtct agcagatgct cgttattatt
    10381 tcaaagaaaa taagtcaacc attctagagt ggatggctca attagattta aaaacaattc
    10441 aagtagctgg agaggagcgg ttttaccttg gggtgcttga tgaggcagat ttacctcagt
    10501 gtcttttcgt tgcaggattt gaccaacttt tgctaggtta tgaaaagaaa gctaatccct
    10561 tttttaatcc taaatacatc cgtaatatct atactttgac gggtattatc aaacctgttg
    10621 tattttataa agggcgattt gtggcaacct ggaaacgaga taaaggtacc attttgctag
    10681 atatttttga agacatcaca caacaagaag aaaaagaatt ggatcattac cgccaaatgt
    10741 atgagaaaat tctgtgacat taactaacta tgttcggaaa atccgaaaat tgcaaataaa
    10801 taactaaatt ttctgaatat tccagaaaaa ctatgatata atacttaaaa tacgtaagga
    10861 agagatagat atgaataagt cttactttta tttggacatg agaactcatg aattagatgt
    10921 accatttaca ggaagaaaac gtcgagtccg tgttttattg ccgaaaggat atgctgaaaa
    10981 tacagaagag acctatcccg ttgtctattt ccacgatggg cagaatgtac tctacagtaa
    11041 ggaagctttt tcaggtcatt catggaaagt catcccaact attaagcgta atccagacat
    11101 tgcaaaaatg atcgtagtgg ctattgataa tgatggtgct gatcgcatgc atgaatacgc
    11161 tgcttggaag tttagtgaga tggggatttc tggcgtgcag ttcggtggta agggaacctt
    11221 gtatgccgaa tttgtgatgg atgtcgtcaa accatttatt gatcaagaat accggacaaa
    11281 atctgataaa gttcacactg caatgattgg ctcatcgttg ggaggcaata tcacccagtt
    11341 tatgggattg gcttatcaga accagattgg ctgtctaggt gtcttttcat ctgccaactg
    11401 gcttcatcaa gatgctttcg accgttatat tgaacgtcaa caattagact cagatcaacg
    11461 tgtctacatc tatgttggga cagaggaagc agatgataca gataaaacgc tgatggctgg
    11521 caatatcaaa caagcctata ttaattcgtc tttaagctat tatcgtcagt tgattgctgg
    11581 tggtgttaaa ttggacaaca taaccttaga agtcgtttcg ggagctgttc acaatgagga
    11641 ggtttgggca ctctatttgc cagcttgcct acgattccta agcgaacatt ggtcataaaa
    11701 caaaaatatt taaataggag gctttactat gcacgttgaa tttttaagtc attggtctgg
    11761 aaatcttggc cgagaaatga atctaaatcg ttatggtcac gcagggattc ctgttgttgt
    11821 ctttgcctca tctggcggtt cttataatga atatgctgat tttggtatga ttgaagcttg
    11881 ccgcgggtct atcgaagcag gtcatgtaca atttttcacc cttaccagct ttgataatga
    11941 aagttggttg gccgattgga aatccattca tgataaggca gaggctcacc gtgcctatga
    12001 acgctatgtg attgaagaag cgattccatt tatcaaacat aaaacaggct ggttcgatgg
    12061 tatgatgaca actggttgct ctatgggggc ctaccacgcg ctgaatttct tcctccagca
    12121 tccggatgtt ttcataaaag tcatcgccct ttcaggtgtc tatgatgctc gtttcttcaa
    12181 caacaatcaa gactatggca atgacgatgt tgtttatcag aactcaccat ctgactacat
    12241 ctggaaccaa aacgacggct ggtttattga taaataccgc caagcagata ttatcgtctg
    12301 cacaggtttg ggcgattggg aacaagacgg tttggactca ttctacaatc taaaacgtgc
    12361 ctttgaagag aagaatatcc cagcttggtt tgatacttgg ggaacagatg tggcccacga
    12421 ctgggtgtgg tggagaaagc aaatgccatt cttccttcat tctattggac tataagctag
    12481 aaaggactac ctatgaatta tctcgttatt tcaccttttt atccagaaaa ttttcaacca
    12541 ttcaccattg aattggctaa aaaagaaggc gttacggttc taggtatcgg gcaagaaccg
    12601 tacgaccaat tgcctgaaga acttcgtaat gccttaacag aatacttccg tgttgagaat
    12661 cttgaaaact tggatgaagt caagcgtgca gcagcctttc ttatttacaa gcatggtcca
    12721 atcgatcgag tggaatcaca caacgagcac tggttggaaa atgacgccgc actccgtgaa
    12781 caattcaaca tttttggtgc caagcctaaa cacctgaaaa agaccaaatt taagtctgaa
    12841 atgaaaaaat atttcaaaaa agcaggtgtt ccagtcgttc caggtgtggt tgttaaatcg
    12901 gaacgtgatt ttggtagagc tttgaagaat gttggttttc caatgattgc taaaccagac
    12961 aacggtgttg gagcatcaga taccttcaaa atcgaaaata aagaagattt tgatcggttt
    13021 gtggagacat gggatggagc aactatttat ttcctcgaaa aatttgtcaa ttcaagtatt
    13081 atcacaacct atgatggttt gttgggccac gaaggcaatg ttgtctttga aacaggtttg
    13141 acctatgtac acactccgct ggaactaatg ttgtctagaa aagacaatgc ctacttcatt
    13201 gagaaggagt tggatcctca attagtaaaa tatggtcgcg cgattatcac ggcctttggt
    13261 atgaaagaac gtttcttcca tattgaattt ttcaagaacg gcaaagatta catcgcgatt
    13321 gaatacaata accgtatggc aggcggtttc acagttgaag cctataacta tgcgcattct
    13381 atcgaccttt tccgtgatta cgcaaacatt gtaacagata ttgatgttga agaaagacga
    13441 ttcgattcac aatactgctt ggtcgcaact cgccgtgata cgaccgaata tgttcactca
    13501 gcagatgaca ttcatcaacg atttgctggt aagattaaaa ccgtcaaacg gatgccagat
    13561 gcctttgcgg aacttcaggg aaatgatgcc tatctacttg taacggaaag caagaaagag
    13621 ttagatgaaa tgattgccta cattggtcta acaaaataaa actaactgta agacgccaga
    13681 aatggtgtct ttttttcttt ccttacaaag ctgtaagttt tttaatcaaa actgtaagta
    13741 agtacggaaa gaatattttc tataatagac tcataagaaa tagaaagaag gaaatcacat
    13801 gtcattcaaa tttttacaag caaagagaa
//
LOCUS       DASFQD010000060        13638 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.060, whole genome shotgun sequence.
ACCESSION   DASFQD010000060 DASFQD010000000
VERSION     DASFQD010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 13638)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13638)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13638
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.060"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            31..1929
                     /locus_tag="U1021_001355"
     CDS             31..1929
                     /locus_tag="U1021_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM4711891.1"
                     /translation="MIILSGNKIERSFAGEVLFNNINIQVDERDRIALVGKNGAGKST
                     LLKILVGEEAATSGEISTKRDLSLSYLAQDSRFESENTIYDEMLHVFDDLRMTEKRLR
                     SMEEQMGSLSGSELDQLMKTYDSLSEEFRLAGGFNYEADIRAILNGFKFDQTMWDMKI
                     SELSGGQNTRLALAKMLLESPELLVLDEPTNHLDIDTIAWLENYLVHYKGALIIVSHD
                     RYFLDKVATLTLDLTKHSLDRYVGNYSQFVELKEQKLQTELQNYEKQQKEIAKLEDFV
                     QKNIVRASTTKRAQARRKQLEKMERLDKPTTGQKSANMTFQSDKTSGNIVLTVENAAV
                     GYDGNILSQPISIDQRKLDTIAIVGPNGIGKTTLLKSIIGALPFIKGEAKLGANVEVG
                     YYDQTQSALTPSNTVLEELWSAFPTTPEVEIRNRLGAFLFSGDDVKKSVSMLSGGEKA
                     RLLLAKLSMENNNFLILDEPTNHLDIDSKEVLENALIDFDGTLLFVSHDRYFINRVAT
                     KVLEISETGSTLYLGDYDYYLEKKAEQEADAQPDQLESTSQSAGAMDYQAQKENQKEQ
                     RKLARRIEQIEAEIETIENHLSELNRAMLETNDIGQLTDYQKEIDQLTAQQENLMEEW
                     EELSEQMG"
     gene            2117..2593
                     /locus_tag="U1021_001356"
     CDS             2117..2593
                     /locus_tag="U1021_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3955 domain-containing protein"
                     /protein_id="HEM4711892.1"
                     /translation="MNFGQQIKDLRKKKGLTQEQFALKLNVTRQAVSNWENDKNLPDL
                     ELLILMSSVFSISLDQLILGGTDMNNMTEKLVKDGREGRRTQMHLTITIIGSFLMLLG
                     FVCFVIKANSVEYIDAEGILHENFYLIPVGYLLVFTGALASLLSGLALHRFRKENT"
     gene            2595..3422
                     /locus_tag="U1021_001357"
     CDS             2595..3422
                     /locus_tag="U1021_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEM4711893.1"
                     /translation="MTKHPRFSNSDQFFACPHCGQDLGLDLNSLRCPNRHTFDIAKQG
                     YVNLAPQVKQSANYHKSSFENRQAFLEAGYYDHLYAALEGKIAELGLRSVLDIGCGEG
                     FYSRKLAEKMDLDILAFDISKDSILLAAKSDRTKSVKWFVGDLTKLPIQDQTIDGILD
                     IFSPANYQEFARVLKTGGAILKLVPGPNHLKELRHLAKDQLRKESYDNQDIVDHFQSY
                     VGQVEQVLVSRTMPITVAHAQVLADMTPLFFQVDQSKLDLSQLTEITIEGLLLVGTI"
     gene            complement(3727..4515)
                     /locus_tag="U1021_001358"
     CDS             complement(3727..4515)
                     /locus_tag="U1021_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HEM4711894.1"
                     /translation="MVYTSLKSPEKDYTYDLHIAHLYGDLMNTYGDNGNILMLKYVAE
                     KLGARVQVDIVSLTDEFDKDFYDIAFFGGGQDYEQSILAKDLPTKKDSLADFIENDGI
                     MLAICGGFQLLGQYYIEAGGRKIDGLGIMGHYTLNQTNNRYIGDIKIHNDEFNETYYG
                     FENHQGRTFLADNQKPLGKVVYGNGNNKEDGGEGLHYKNTFGSYFHGPILSRNANLAY
                     RLVTTALRKKYGQDIQLASYTDILSKEVAEEYGDVKSKAEFDTQ"
     gene            complement(4515..5858)
                     /locus_tag="U1021_001359"
     CDS             complement(4515..5858)
                     /locus_tag="U1021_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEM4711895.1"
                     /translation="MKINTALGILAGKSSQFILKKLGRGTTLPGKIALKFDKHILDSL
                     AKDYEVVVVTGTNGKTLTTALTVGILQEAFGEITTNTSGANMITGITATFLSAKKNKN
                     GKKIAVLEIDEASLARVTDFIKPSLIVFTNIFRDQMDRYGEIYTTYQMILDGAAKAPQ
                     ATILANGDSPLFNSTNVINPVKYYGFATEEHEPRLAHYNTEGVLCPHCHQIIQYKLNT
                     YANLGSYICSNCGFSRPELDYKLTELKEITNTSSTFAIDGQDYKINIGGLYNIYNALA
                     AVSVAEFFGVAPEKIKAGFDKSKAVFGRQETFKLGDKDCTLVLIKNPVGATQAIEMMK
                     LAPYDFSLSVLLNANYADGIDTSWIWDADFEQITQMDIPQVFAGGVRSSEIARRLRVT
                     GYPENQITETPKLEDIMTLIEQSSSQHAYILATYTAMLEFRDLLAQRQAVGKEMK"
     gene            6038..6892
                     /locus_tag="U1021_001360"
     CDS             6038..6892
                     /locus_tag="U1021_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00159 family protein"
                     /protein_id="HEM4711896.1"
                     /translation="MLNLNQLLDTGYWSSLIASPWTALLHLIDISIVVYLIYNFSKSI
                     AGTKIMTLIRGVFLFIIFQIIASLFGLQTIAWLINQVITYGVIAAVVIFAPELRAMLE
                     KLGRTTQIFGTNTVSAEEKLIVAFLKSVAYMSPRKIGALVAVEQVQTLQEYRATGIPL
                     NADISQELLINIFIPNTPLHDGAVIVKEDKVAVACAYLPLSESAGISKEFGTRHRAAI
                     GLSEVSDAFVFIVSEETGSISIARNGIFKHDLTLDEFEAELRATFISENVEKKSIWKR
                     LGGGKHER"
     gene            6882..7586
                     /locus_tag="U1021_001361"
     CDS             6882..7586
                     /locus_tag="U1021_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711897.1"
                     /translation="MNDKFKAVGHLALSIFLALLLFFYATTTNYKNSETAAQNTESET
                     YVHTLSNVPIEIEYDTNKYFISGFSSTVAVELRGSNRVLLQRESDESTRTFQVTADLR
                     ELSDGTQTVKLQLTNLPAGVSATLAPDAITVKIGKKVSKAFPVAGRVYSNQFAEGYSL
                     SKVSVNVDTVKVTTDEETMAKIDQVEAVAMDVSNLSENYSGTAKLQAVDSDGNVLPVV
                     LSQTEANMQIILTKTK"
     gene            7599..8951
                     /locus_tag="U1021_001362"
     CDS             7599..8951
                     /locus_tag="U1021_001362"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007517007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEM4711898.1"
                     /translation="MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETDVPRV
                     FVARDTRISGQMLEAALIAGLLSVGIHVYKLGVLATPGVAHLVKTEKASAGVMISASH
                     NPAQDNGIKFFAGDGFKLDDALEAEIEALLDAEEDTLPRPSAQGLGDVVDYPEGLRKY
                     ESFLVSTGIQLEGMKVALDTANGAASTSARQIFADLGADLTVMAEHPDGLNINEGVGS
                     THPEKLQELVKETGSQIGLAFDGDSDRLIAVDENGDLVDGDRIMYIVGKYLSEKGLLA
                     KNTIVTTVMSNLGFHKALDREGIEKAVTAVGDRYVVEEMRKGGYNVGGEQSGHVILMD
                     YNTTGDGQLTAVQLTKIMKETGKKLSELAAEVTIYPQKLVNIRVENSMKEKAMEVPAI
                     AAIIEKMEAEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRAEIGLD
                     "
     gene            9001..10545
                     /locus_tag="U1021_001363"
     CDS             9001..10545
                     /locus_tag="U1021_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000025412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM4711899.1"
                     /translation="MSILEVKNLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKST
                     FMSIVTGQLQPDEGKVEWSRYVTAGYLDQHAKLEKGQSVRDVLRTAFDELFKTEVRIN
                     DIYMSMAEEGADMDALMEEVGELQDRLESRDFYTLDAKIDEVARALGVMDYGMDKDVT
                     ELSGGQRTKVLLAKLLLEKPDILLLDEPTNYLDAEHIDWLKRYLQNYENAFVLISHDI
                     PFLNDVINIVYHVENQLLTRYTGDYYQFQEVHAMKRAQLEAAYERQQKEIADLQDFVN
                     RNKARVATRNMAMSRQKKLDKMEIIELQAEKPKPSFDFKMARTPSRFIFQTTDLEIGY
                     DRVLTRKPLNLTFERNQKIAIVGANGIGKSTLLKSLLGIIPPLGGSVERGEYLELGYF
                     EQEVAGGNRQTPLEAVWDAFPALNQAEVRAALARCGLTSKHIESQIQVLSGGEQAKVR
                     FCLLMNRENNVLVLDEPTNHLDVDAKDELKRALQAYKGSILMVCHEPDFYEGWVDDVW
                     DFNDLT"
     gene            10707..11912
                     /gene="sstT"
                     /locus_tag="U1021_001364"
     CDS             10707..11912
                     /gene="sstT"
                     /locus_tag="U1021_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003046742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HEM4711900.1"
                     /translation="MNKIISVWKKMNLIRKIGIGVVLGVLLGLIAPKITVIALFGSLF
                     VGALKAIAPLLVLTLVAHALSQAPAGQKSNMRIVICLYLFGTFAAAFIAVGASYLFPI
                     KLVLSTTTTTDITPPQGIAEVFQDLLLKVVDNPINALATANYIGVLTWAAVFGLAFRH
                     ASKTTKDLLQSAAEVTSKVVGWIIGLAPFGIMGLVFDTIANNGLTALKDYGLLLLLLV
                     GSMIFVALVVNPLITFLVMKKNPYPLVFECLRVSGVTAFFTRSSAANIPVNMQLCKRL
                     GVDPDTYSVSIPLGATINMAGAAITINILTMAAVHTLGISVDFSSALLLSVVASLSAA
                     GASGVAGGSLLLIPVACSLFGIPNELAMQVVGVGFVVGVIQDSCETALNSSTDVLFTV
                     VAERSAWKK"
     gene            12117..13517
                     /gene="pepV"
                     /locus_tag="U1021_001365"
     CDS             12117..13517
                     /gene="pepV"
                     /locus_tag="U1021_001365"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepV"
                     /protein_id="HEM4711901.1"
                     /translation="MTVDFRAEFDKRKDEFLADLFDLLRINSERDDSQADAQHPFGPG
                     PVHALDKFLEIAQRDGYPTKNVDNYAGHFEFGEGEEVLGIFGHLDVVPAGSGWNTDPY
                     EPQIIDGKLFARGSSDDKGPTMACYYGLKIIKELGLPTSKKVRFIVGTDEESGWADMD
                     YYFEHVGLPLPDFGFSPDAEFPIINGEKGNITAYLHFAGENSGAAKLHSFTGGLRENM
                     VPESATAIISGDLVDLDSKLVDFTAAYGLKADAETLENGQVQVTVIGKSAHGSTPEEG
                     VNGATYLAKFLSQFAFDGSAKSYLDLAGQVLLEDYDAQKLGVAIYDEQMGALSMNAGV
                     FKFDETSSDNTIALNFRYPKNTNPETIKAGLEKLGVEAVSLSEHGHTPHYCPIDDPMV
                     ATLLSVYEKHTGLKGHEQVIGGGTFGRLLKRGVAYGAMFPGDINTMHQANEFIEVEQL
                     YRAATIYAEAIYELIK"
BASE COUNT         3758 a         2897 c         3245 g         3738 t
ORIGIN      
        1 ggttcggcta atttatggta caatattgct atgattattc taagcggaaa caagattgaa
       61 cgctcatttg cgggcgaagt tttatttaac aatatcaaca ttcaagtgga cgagcgagat
      121 cggattgccc ttgtcggaaa aaatggggct ggcaagtcaa ctcttcttaa aatccttgtc
      181 ggagaagaag cagcgactag cggcgagatt tctaccaagc gagatttatc gctttcttat
      241 ctggcacagg atagccgttt tgagtcggaa aatactatct acgatgagat gctccatgtc
      301 tttgatgacc tgcgaatgac ggagaaacgc ctgcggtcta tggaagagca aatgggcagt
      361 ttgtctggta gtgaacttga ccagctgatg aaaacctatg atagtttgtc agaggaattt
      421 cgtctggcag gtggctttaa ctatgaggcg gatatccgtg ctattttgaa tggttttaag
      481 tttgaccaaa ccatgtggga tatgaaaatt tccgaactct ctggagggca aaatacccgt
      541 ttggctttgg caaaaatgct tcttgaaagc ccagagttat tggtgctgga cgagccgacc
      601 aaccatctgg atattgacac gattgcttgg ctggaaaact acctagtgca ttacaaggga
      661 gccttgatta tcgtcagtca cgaccgctat ttcttggaca aggtagcgac actgacactg
      721 gacttgacca agcattcctt ggatcgctat gtgggcaatt attctcagtt tgtcgagctc
      781 aaagagcaga agttgcaaac ggaattgcaa aattatgaga agcaacagaa ggaaattgcc
      841 aagttagaag actttgttca gaaaaatatt gtccgtgctt cgaccaccaa gcgtgctcag
      901 gctagacgca agcagttgga aaagatggag cgactggaca agccaacaac tggtcagaag
      961 tctgccaaca tgactttcca gtcggacaag acttctggca atatcgtctt gacagtggaa
     1021 aatgctgcgg tgggctacga tggaaacatt ctttcccagc ctatttctat tgaccaacgc
     1081 aagctggata ccattgccat tgtcggtccg aatggaatcg gaaaaacaac cctgctcaaa
     1141 tcaatcatcg gagctctgcc atttatcaaa ggggaagcca agctaggtgc caatgtggaa
     1201 gtgggctact acgaccagac ccagtctgcc ctgacgcctt ccaatactgt cttggaggag
     1261 ctctggtcag cctttccgac cacacctgaa gtggaaatcc gcaaccgcct tggagccttc
     1321 ctcttctcag gcgatgatgt caaaaagtcc gtttccatgc tgtcgggtgg ggaaaaggcc
     1381 cgcctgctcc tggccaagct atccatggaa aacaacaact tcctcatcct cgacgagccg
     1441 accaaccacc tggacatcga cagcaaggaa gtgctggaaa atgccctcat cgattttgac
     1501 ggcaccttgc tctttgtcag ccacgaccgc tatttcatca accgcgtcgc caccaaggtc
     1561 ctggaaatct cggaaactgg ctccacgctc tacttgggcg actatgacta ttatttggag
     1621 aaaaaggcag agcaggaagc agatgcccag cccgaccagc tagaaagtac tagccaatca
     1681 gccggagcca tggactacca agcccaaaag gaaaaccaaa aagagcaacg caaactagcc
     1741 cgccgcatcg agcaaatcga ggcagaaatt gagaccatcg aaaaccatct cagcgagctt
     1801 aaccgagcca tgctagaaac caacgacatc ggtcagctaa ccgattacca gaaagaaatc
     1861 gatcaattga ctgcccaaca agaaaatctc atggaagaat gggaagaatt atcggagcag
     1921 atgggctagg ttgacagcaa gttgacaaga ggctcaaatc cttgatagaa caagcttgca
     1981 agccagtctt gcggagctgg caagaccacc tttcgctaaa aaagtccaga gcaagccagc
     2041 ctttcttggc aaacattggt caacaagcta agataaaatc agaacctgcc agacaggttc
     2101 ctgaaaggag aaagaaatga actttggaca gcaaatcaaa gacttacgaa aaaagaaagg
     2161 tttgactcag gaacagtttg ccctcaaact caatgtgact cgacaggccg tttccaactg
     2221 ggaaaatgac aaaaacctgc ccgacttgga actcttgatt ctcatgtcct ctgtcttttc
     2281 gatctcctta gatcaactta tcttaggagg aactgacatg aacaacatga cagaaaaact
     2341 tgtaaaagac ggtcgcgaag gtcgccgtac ccagatgcac ctgaccatta ccattattgg
     2401 tagttttctc atgcttctcg gcttcgtctg ctttgtcatc aaggcaaact cggtcgagta
     2461 tattgatgcc gagggcattc tacatgaaaa tttttatctc attccagtcg gctacttgct
     2521 agtctttaca ggagcccttg cctcgctcct atcaggacta gccctgcacc gctttagaaa
     2581 agaaaatact taacatgacc aaacacccac gttttagcaa tagtgaccaa tttttcgcct
     2641 gtccacattg tgggcaggat cttggtcttg acctcaacag cctccgctgt cccaaccgcc
     2701 acaccttcga catcgccaag cagggctatg tcaatctggc acctcaggtc aagcagtccg
     2761 ccaactacca caagtctagc tttgaaaacc gccaggcctt tttagaggcg ggctattacg
     2821 accatctcta tgcggctttg gagggaaaaa tagcagagct gggcttgcgg tctgtcttgg
     2881 atatcggctg tggagagggg ttttattccc gcaaattagc cgagaaaatg gacttggaca
     2941 ttcttgcttt tgatatttcc aaggattcca ttctcttggc agccaaatct gacaggacca
     3001 agtcggtcaa atggtttgtc ggtgacttga ccaagttacc cattcaagac cagaccattg
     3061 acggtatctt ggacatcttc tccccagcta attatcagga gtttgccaga gtgttaaaaa
     3121 ctggtggggc aattctcaag ctggtcccag gtccaaatca cctcaaggag ctccgccatt
     3181 tagccaaaga ccaactccgc aaggagtcct atgacaacca agatatcgta gaccatttcc
     3241 agtcttacgt ggggcaggtg gagcaagtgc tagtcagtcg aaccatgccc ataactgtcg
     3301 cccatgctca agttttggca gacatgacgc ccctcttttt ccaagtggac cagtccaagc
     3361 tggatttgag tcagttgacc gagattacga ttgagggatt gctcttggta ggaactatat
     3421 aaaaaatgaa accgcctctg gatatcagaa gcggttttgc tttatttctc atactcttcg
     3481 aaaatcaaag tcagacgttg ttgacttgat ttgatgagtg gaaagctcca gcggaggttt
     3541 ccagcctatc acttgacaat aataaataaa gtgacagagt tctatctgcg ccatatagac
     3601 acgaacgatg ttcgctctat ttccaaccac caaaggttcc ccaaaccttt tgtagcgaac
     3661 tttgttcgct ttatttccca ccaccaaagg ttccccaaac ctttggtgct agtctgattc
     3721 tgattttcat tgagtatcaa attctgcctt gctttttaca tcgccgtatt cttcagcgac
     3781 ttctttactg aggatgtcag tatagctggc aagttggatg tcttgtccat attttttacg
     3841 gagggcagtt gtgaccaggc ggtaggctag gttggcattg cgggacagga tgggcccgtg
     3901 gaagtagctg ccgaaggtgt ttttgtagtg caggccttcg ccaccgtctt ccttattgtt
     3961 gccattacca tagacaacct tgcccagcgg tttttggttg tcagctagga aagtacggcc
     4021 ttggtggttt tcaaaaccgt agtaggtttc gttgaattca tcattgtgaa ttttgatgtc
     4081 accgatatag cggttattgg tctggttgag ggtgtagtgg cccatgattc ccagcccgtc
     4141 aatcttgcga ccgccagctt cgatgtaata ttgcccgagc aattggaagc caccgcagat
     4201 agccagcatg ataccgtcgt tttcgataaa gtctgctagg ctgtcttttt tagttggtaa
     4261 atcttttgca agaatagatt gttcatagtc ctgaccacca ccaaagaagg cgatgtcgta
     4321 aaaatccttg tcaaattcat ctgtcaggga aacgatgtcc acctggacac gagcccccag
     4381 cttttcagct acatacttga gcatgaggat attgccattg tcaccgtagg tgttcatcaa
     4441 atcaccgtag aggtgggcga tgtggagatc ataagtgtag tctttttcag gactttttaa
     4501 tgacgtatag accattattt catctccttt ccaacggctt ggcgttgagc cagcaggtca
     4561 cggaattcga gcatagctgt ataagtagct aaaatataag catgttggct actcgattgc
     4621 tcaatcaagg tcatgatgtc ttctagtttt ggtgtttcag taatctggtt ctcaggatag
     4681 ccagtcacac ggaggcgacg ggcgatttca gacgaacgaa caccacctgc aaagacttga
     4741 ggaatgtcca tttgagtgat ttgttcaaag tcagcgtccc aaatccagct ggtatcaatt
     4801 ccgtcagcgt agttggcatt gagaaggact gacaggctaa aatcgtaagg agccaatttc
     4861 atcatttcaa tagcctgagt cgcaccgacc gggtttttaa tcaagaccag tgtacaatcc
     4921 ttatcaccga gtttaaaggt ttcttggcga ccaaagactg ccttagattt gtcaaatcct
     4981 gccttgattt tctcaggagc tacaccgaaa aattctgcta cgctgacagc tgctagggca
     5041 ttgtagatgt tgtagaggcc tccgatgttg attttgtaat cctgaccgtc aatggcaaag
     5101 gtagaagaag tattggtgat ttcttttagt tcggtcaact tgtagtccag ttcaggtcgg
     5161 ctaaagccgc agttgctaca gatgtagcta cccaagttag cgtaggtatt cagcttgtac
     5221 tggataatct ggtggcaatg tggacagaga acgccctcgg tattgtaatg ggccagacgc
     5281 ggctcatgtt cttctgttgc aaaaccatag tacttcactg gattgataac gttcgttgag
     5341 ttgaaaagcg ggctgtcacc gttggctaaa atggttgcct gtggagcctt ggcagccccg
     5401 tccaaaatca tctggtaggt ggtataaatc tccccgtagc gatccatctg atcacggaag
     5461 atattggtaa agacaatcaa gctaggcttg ataaaatcgg tcacacgggc caagctagcc
     5521 tcatcaatct ccaagacggc aatcttcttg ccgtttttat ttttcttggc agataaaaag
     5581 gtagctgtaa tccctgtaat catattggca ccgctggtat tggtcgtgat ttctccaaag
     5641 gcttcttgga ggataccaac tgtcagggcg gtggtcagag tcttaccgtt agtacctgtc
     5701 acaacaacga cttcataatc cttagccaaa ctatctaaaa tatgtttatc gaatttgagg
     5761 gcaatttttc caggtagggt agtaccacgt cctagttttt tcaaaatgaa ctgggaactt
     5821 tttcctgcta gaatacccaa agctgtattt attttcatgg gattatttta tcataaaggt
     5881 cactgatttt ctagaatgga gtgtgttgga acgtgatata ttcctgcagt aaatctgtac
     5941 tatttttaac aggaaggtca ctattttcta aagaaaaggg gaaaatatgg tataatgggt
     6001 acattactat gtatgagtta gaaagtatga gaatgatatg ttaaacctaa accagttact
     6061 ggatacaggg tattggtcga gtttgatagc cagtccttgg accgcattgt tgcacctaat
     6121 tgatattagt attgttgttt atctgattta taattttagt aagtctattg caggtactaa
     6181 aattatgaca ttgattcgag gggtttttct cttcattatt ttccagatta tagcgagttt
     6241 attcggtctg cagacgattg cttggctgat taatcaagta atcacgtatg gggttattgc
     6301 agcagtagtt atttttgcac cagagttgcg tgctatgctg gaaaaactcg gtaggacaac
     6361 tcagattttt gggacaaata cagtgagtgc agaagaaaag ttaattgttg cttttctcaa
     6421 atcggttgct tatatgtctc cgcgtaaaat tggtgcactt gtggcagtag aacaagtcca
     6481 aacattgcaa gaatatagag caacggggat tccacttaat gcggatatat cgcaggaatt
     6541 gttaataaat attttcatcc cgaatacacc gttacatgat ggggctgtaa ttgtcaagga
     6601 agacaaggta gctgttgctt gtgcttattt gcccctgtca gagagcgcag gaatttcaaa
     6661 ggaatttgga acacgacatc gtgcagccat tggcttatcg gaggtatctg atgcgtttgt
     6721 atttattgtt tctgaagaaa ctggcagtat ctctattgca cgaaacggga tatttaaaca
     6781 tgatttgact ttggatgagt ttgaagcaga gttgcgagcg acttttattt ctgaaaatgt
     6841 agagaagaag tccatctgga agcgattagg aggtggcaaa catgaacgat aagtttaaag
     6901 ctgtaggtca cttagcctta tctatttttc tagcattgtt gctctttttc tatgcaacaa
     6961 ccaccaacta taaaaattca gaaacagctg cacagaacac ggagtcagaa acctatgttc
     7021 acacactgag caatgtaccg attgagattg aatatgatac aaacaagtat tttatttccg
     7081 gattttcttc gacggtagca gttgaattaa ggggctctaa tcgtgttctc ctacagagag
     7141 aatccgatga gtcaactcgg acgtttcaag tgactgcgga tttgagagag ttgagtgatg
     7201 ggacacagac tgtcaaacta caattgacta atttgccagc aggagtgagt gcgacactag
     7261 caccagatgc gattaccgtt aagattggta aaaaagttag caaggcattc ccggtagcag
     7321 gtcgagtcta tagtaatcaa tttgcagaag gttacagtct gtctaaggtt tcagtcaacg
     7381 tagataccgt taaagtgaca acggatgaag aaacaatggc taagattgat caggtcgaag
     7441 ctgttgcgat ggatgtgagc aatctgtctg agaattatag tggtacagct aaattacagg
     7501 ctgtagatag cgacggcaat gtcttgccag ttgtactgtc tcagacggaa gcaaatatgc
     7561 aaattatact tacaaaaaca aaataagagg ttatgaaaat gggtaaatat tttgggacag
     7621 atggtgtccg tggagaagca aacgtagaat taacgccaga attagcattc aaattggggc
     7681 gttttggtgg ttatgtcctt agccagcatg agacggatgt tcctcgtgtc tttgtggcgc
     7741 gtgacacacg tatctcaggt caaatgttag aggctgcctt gattgcagga cttctatcag
     7801 tagggattca tgtgtataaa ttgggagttt tggcgacacc gggtgttgcc cacctagtca
     7861 aaactgaaaa agcaagtgca ggtgtcatga tttctgcaag tcataaccca gcgcaagata
     7921 acggtatcaa attctttgct ggtgatggtt tcaaattgga tgatgcattg gaagcggaga
     7981 ttgaagctct cttggatgct gaagaagata cacttcctcg tccatctgca caaggcttgg
     8041 gtgatgtggt agattatcca gaaggcttgc gtaaatacga atccttcctt gtttcaacag
     8101 gtattcagct agaaggtatg aaagttgcct tggatactgc caatggcgct gcctcaacct
     8161 ctgctcgtca aatttttgcg gatttgggag ctgatttaac cgttatggct gaacatccag
     8221 acggattgaa tattaatgaa ggcgttggct caactcatcc tgaaaaattg caagaactgg
     8281 tcaaggaaac aggtagtcaa attggacttg cctttgatgg tgacagtgac cgcttgattg
     8341 ctgtcgatga aaatggtgat ttggtagatg gcgaccgcat catgtatatc gtcggcaagt
     8401 acctgtctga aaaaggactt ttggcaaaaa atacaattgt gacaaccgtt atgtctaacc
     8461 ttggtttcca taaggccttg gaccgtgaag gtattgaaaa agctgtgacc gcagttggtg
     8521 accgttatgt ggtggaagaa atgcgtaaag gtggctacaa tgtcggtggt gagcagtcag
     8581 gacatgtgat tctgatggat tataacacca caggcgacgg ccagttgacc gctgtgcaat
     8641 tgaccaaaat catgaaagaa actggtaaga agttgtcaga attggcagca gaagtgacca
     8701 tttacccaca aaaattggtc aatatccgtg tggaaaacag catgaaagaa aaggctatgg
     8761 aagtgcctgc tattgcagct atcattgaaa aaatggaagc agaaatggct ggcaacggtc
     8821 gtatcttggt tcgcccaagt ggtactgagc ccctcttgcg tgtcatggca gaagcgccaa
     8881 cggatgctga agtcgattac tatgtggaca ccattgccga tgtggtccgt gcggaaatcg
     8941 gtttggatta agaaaaagac agagactgga aggatttcca gcctcttttg tgaggaaatt
     9001 atgagtattt tagaagtaaa aaatttaagt catgggtttg gtgaccgcgc gatttttgag
     9061 aatgtctcct tccgtctttt aaaaggggag catattggtc ttgtcggtgc caatggagaa
     9121 gggaaatcga ccttcatgtc tatcgtgaca ggtcaattgc agccagatga aggtaaggtt
     9181 gaatggtcac gttatgtaac ggcaggttat ttggaccagc atgctaaact agaaaagggt
     9241 caatcagtcc gtgatgtctt gcggacagca ttcgatgaac tcttcaagac agaagttcgt
     9301 atcaatgaca tttacatgtc tatggcagaa gagggtgctg atatggatgc cctcatggaa
     9361 gaggttggtg agctacaaga ccgtctggaa agccgtgatt tctatacgct tgatgccaag
     9421 attgacgaag tggcgcgtgc gcttggtgtc atggactacg gcatggacaa ggatgttacg
     9481 gagttatcag gaggtcaacg gacaaaagtt cttttggcaa aattgctctt ggaaaagcct
     9541 gacatcttgc ttctggatga gccgaccaac tacttggatg ctgaacacat cgactggctc
     9601 aaacgctact tgcagaacta tgaaaatgcc tttgtcttga tttcgcatga cattcctttc
     9661 ctgaatgatg tgattaacat tgtctaccat gtggaaaatc agctcttgac tcgttacaca
     9721 ggcgactatt accaattcca agaagtacat gctatgaagc gggctcagtt agaggcagcc
     9781 tatgagcgcc agcagaagga aatcgcagac ttgcaggact tcgttaaccg taataaggct
     9841 cgtgttgcaa ctcgaaacat ggccatgtct cgtcagaaga agctggataa gatggagatt
     9901 attgagcttc aagcagagaa accaaagcca tcatttgatt tcaaaatggc tcgaactcca
     9961 agtcgcttta tcttccaaac gactgatttg gaaattggtt atgaccgtgt attgacacgt
    10021 aaaccgctca atctgacctt tgaacgcaac cagaagattg ccattgtcgg tgccaacggt
    10081 atcgggaaat ccactcttct taaaagtttg ctggggatta ttccaccgct gggcggttct
    10141 gtggagcgtg gggagtattt ggaactaggc tatttcgagc aagaagtagc tggaggcaat
    10201 cgtcagaccc cgctggaagc cgtttgggat gcttttcctg ctcttaacca ggcggaagtt
    10261 cgggcagcct tggctcgttg cggtctgact tccaagcata tcgaaagtca gatccaagtc
    10321 ctttcaggtg gtgagcaggc caaagttcgc ttctgtttgc ttatgaaccg tgaaaacaat
    10381 gtcttggttc tggacgagcc gactaaccac ttggatgtgg atgccaagga tgaactcaaa
    10441 cgtgcccttc aagcctacaa gggctctatc ctcatggtct gccacgagcc tgatttctat
    10501 gaaggctggg ttgacgatgt ctgggacttt aatgacttga cttagattga aagctatcga
    10561 aaggtagctt tttggttcag tttgtaaaga cgaaaatgtt attacatgct tttcaaattt
    10621 tcactacctg atactcattt tttattctat tgaccaagcc tcgtttttct gctaatatga
    10681 aaaaatgttt gtttggaggt aaatgagtga ataaaataat atctgtatgg aaaaaaatga
    10741 atttaatccg aaaaatcgga attggtgttg ttttgggagt gttactaggc ttaattgctc
    10801 caaaaataac ggtcattgct ctctttggta gtctatttgt aggagcattg aaagctatag
    10861 cccctctttt ggttctgaca ctagttgcac atgctctatc acaagctcct gctggtcaaa
    10921 aatcgaatat gaggatagtt atctgcttgt atctatttgg tacttttgcg gcggccttca
    10981 ttgctgtagg agcaagctat ttattcccta ttaaactggt tctttctact acaacgacta
    11041 cggacattac tcctccacaa gggattgctg aagtattcca agacctcttg ttgaaggtcg
    11101 ttgacaatcc aatcaatgct cttgcaacgg ctaattatat tggtgtgttg acatgggcgg
    11161 cagtgtttgg cttggccttt cgtcatgcaa gcaagacaac caaagattta ttgcaatctg
    11221 cggcggaagt gacttctaaa gttgtaggct ggattattgg tctggcacca tttggtatca
    11281 tgggcttggt ttttgatacc attgcaaata atggtctgac agctttaaaa gactatggtt
    11341 tactgctctt actcttggtt ggaagcatga tttttgtcgc gcttgttgtc aatcccttga
    11401 ttacttttct tgtaatgaag aaaaatccgt acccgctggt atttgaatgt cttcgggtta
    11461 gtggggttac ggcatttttt acaagaagtt cagcagctaa tatccctgtc aatatgcagc
    11521 tctgcaaacg tttaggagtg gatccagata catattcagt atccattccg ctcggtgcca
    11581 caattaatat ggctggcgca gctattacga ttaatatttt aacaatggca gctgttcata
    11641 cacttggcat tagtgttgat ttcagctcag ctcttctttt atccgttgtt gcatcactat
    11701 cagcagcagg agcatcaggt gtagcaggag gttcgcttct cctcatccca gtagcatgta
    11761 gtctttttgg tattccaaat gagttagcca tgcaagtagt tggagtcgga tttgtggtcg
    11821 gagtgattca ggactcttgt gaaacagccc tcaattcatc gaccgatgtc ttgtttacag
    11881 ttgtagcaga acgctctgcc tggaaaaaat agaaagaagt tgggtgacca actttttttc
    11941 ttcgctttac ttctgaaatc tctttcattt tatgataaaa tagacttact ttgatatagt
    12001 cttttggttt acttttagaa ctaggcaacg agccgcaggc ataactggag ttaggcaagg
    12061 tgagttaacg aagtaataaa agataaacca aatgacgata ctgaaaagga gaacatatga
    12121 cagtagattt tagagcagag tttgacaaac gcaaggacga gtttctagcg gacctctttg
    12181 acctcctccg catcaattct gagcgtgacg acagccaggc agatgcccag cacccatttg
    12241 gacccggacc agtgcatgcc ttggacaagt tcctggaaat tgctcagcgt gacggctatc
    12301 cgacgaaaaa cgttgacaac tacgcaggtc actttgaatt cggagagggc gaagaagtcc
    12361 tcggtatctt cggtcacttg gacgtggtgc cagcaggaag tggctggaac actgatccat
    12421 acgagccgca gatcatcgac ggcaagctct ttgcccgcgg ttcgtctgac gacaagggac
    12481 cgaccatggc ctgctactac ggcttgaaaa tcatcaagga gttgggcctt ccgacctcta
    12541 aaaaagtccg tttcatcgtc ggtaccgacg aagaatcagg ctgggcggat atggattact
    12601 acttcgagca cgttgggctc ccattgccag acttcggatt ttctccagat gccgagttcc
    12661 cgattatcaa cggcgaaaag ggcaatatca cagcttactt gcattttgcg ggggaaaata
    12721 gcggagctgc taaactgcat tccttcacag gcggtctgcg tgagaacatg gtgcctgaat
    12781 ctgcgacagc tattatctct ggcgacctag tagatctgga cagcaagtta gtagatttca
    12841 cagcagccta tggcctaaaa gctgacgctg aaacccttga aaatggtcaa gttcaagtca
    12901 ccgtcatcgg aaaatcagcc cacggttcaa ccccagaaga aggtgtcaac ggagcaacct
    12961 atttggcaaa attcctcagc caattcgcct ttgacggatc agcaaaatcc tatcttgact
    13021 tagcaggaca agtccttctg gaagactacg atgcccaaaa actcggcgta gccatctacg
    13081 atgagcaaat gggagctctt tctatgaacg ctggtgtctt taagtttgat gaaacctcat
    13141 cagataacac catcgccctc aacttccgtt atccaaaaaa taccaaccca gaaaccatca
    13201 aggctggttt ggaaaaactg ggcgtggaag ctgttagcct gtctgagcat ggccataccc
    13261 cacactattg cccaatcgat gacccaatgg tcgcaaccct cttgtctgtt tatgaaaaac
    13321 acacaggctt gaaaggtcac gaacaagtga tcggtggcgg aacatttgga cgcttgctca
    13381 aacgtggcgt tgcctacgga gccatgttcc caggcgatat caacaccatg caccaagcca
    13441 acgaatttat cgaagttgag caactctacc gcgccgctac catctatgca gaagctatct
    13501 acgaactcat taagtaatac atgagaggct gggcaaaaag cctagcacca cttttcagag
    13561 ttcgtgtcaa catctcagcg cagtggttga ttgtcagatt tgttcgtgtt ttacactcca
    13621 aatctgacca ttacgact
//
LOCUS       DASFQD010000061        13550 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.061, whole genome shotgun sequence.
ACCESSION   DASFQD010000061 DASFQD010000000
VERSION     DASFQD010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 13550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13550
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.061"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(248..616)
                     /locus_tag="U1021_001366"
     CDS             complement(248..616)
                     /locus_tag="U1021_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3397 domain-containing protein"
                     /protein_id="HEM4711902.1"
                     /translation="MFESIIFLKIVAFLFIFLTLAISIIAVKFFRLQNRGWNFADIAF
                     PLYAIEFYLISDKAYYNSLLPQLVLALSLLAIGLCGFFLLKKKNFLYRRFFKVFWRAS
                     FILTFLMYLALVIAVFTLKS"
     gene            771..1196
                     /gene="rplK"
                     /locus_tag="U1021_001367"
     CDS             771..1196
                     /gene="rplK"
                     /locus_tag="U1021_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004226069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEM4711903.1"
                     /translation="MAKKVEKLVKLQIPAGKATPAPPVGPALGQAGINIMGFTKEFNA
                     RTADQAGMIIPVVISVYEDKSFTFITKTPPAAVLLKKAAGVEKGSGTPNKTKVATVTR
                     AQVQEIAETKMPDLNAASLEAAMRMIEGTARSMGFTVTD"
     gene            1237..1926
                     /gene="rplA"
                     /locus_tag="U1021_001368"
     CDS             1237..1926
                     /gene="rplA"
                     /locus_tag="U1021_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEM4711904.1"
                     /translation="MAKKSKNLRAALEKIDSTKLYSVEEAVALAKETNFAKFDASVEV
                     AYNLNIDVRKADQQIRGAMVLPNGTGKTSRVLVFARGAKAEEAKAAGADFVGEDDLVA
                     KINGGWLDFDVVIATPDMMAVVGRLGRVLGPRNLMPNPKTGTVTMDVAKAVEESKGGK
                     ITYRADKAGIVQALIGKVSFDADKLVENFKAFHDVMAKAKPATAKGTYMTSVSITTTQ
                     GVGIKVDPNSL"
     gene            2031..2321
                     /locus_tag="U1021_001369"
     CDS             2031..2321
                     /locus_tag="U1021_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711905.1"
                     /translation="MKVAEKEELYKYLSAAYNLPQEAFSEALREKILEVAGQLDKEEN
                     LYILAGHLSRFINAELTALTCRAPKELVQLAHYLQEVQNHYRYASLFPGKVK"
     gene            2330..3118
                     /gene="yghU"
                     /locus_tag="U1021_001370"
     CDS             2330..3118
                     /gene="yghU"
                     /locus_tag="U1021_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HEM4711906.1"
                     /translation="MTEYTKPLVWKWEDENDNRSGNRPTAGSRFEQDLPKGEKSFQVY
                     SLGTPNGIKVAIMLEELKELGISEADYDLFLINIGQGDQFGSDFVAINPNSKIPAMVD
                     YSEQEPISVFESANILLYLAEKFDAFLPKTWAERTEVLNWLFWQTGAAPFVGGGFGHF
                     FHYAPTAQEYPINRYTMETKRQLDLLDQLLATREYVAGNTYTIADIAIWSWYGRLVQG
                     ELYPGSAEFLDVDSYKHLKTWVEKIAQRPAVQRGLTVKYHSIDN"
     gene            3373..5013
                     /locus_tag="U1021_001371"
     CDS             3373..5013
                     /locus_tag="U1021_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEM4711907.1"
                     /translation="MSEKVEMQQSKEQATMARGLAWLTAGNILSRLLGVAYVIPWYIW
                     LGEYRAEANALFSMGYQIYANFLLISTAGLPTAIAKQVAKYNVLGKEEVSLYLVREFF
                     KLMLVFGAVFAGVMYLSAPWLADASGSKEKLLPVMYSLVPPLFIFPAMSILRGFFQGR
                     HDMKPYAISQLAEQLVRVIWILAATFMIMKLGSGDYLEAVVQSTFAAFVGMIASVGIL
                     VYTLWKQGYLGKLLHAKKQKISLDTGQLIKETVRDAIPIIILGLTIQLLQFIDQVTFI
                     RVMERITDYSNSELLELYSYMAANPSKITMMIIGISLSLGSVAIPLITEKFVKKDLKA
                     ASHLVADNLQLLFIFTIPAIVGTVLLAGPLYTIFYGPSEPIAITLFIWNLFLILPLGL
                     YSVISVVIQAIFENRRAIYYFLIGMLVKIVLQVPMIYVFKVYGSFISTIFGLGIMLYL
                     FYRRIDKVLHIDERLVIKDIATISWISIVMGLIVWGIEFVLNLILPANGYVSSFIHLA
                     VAGGAGMLVFVILTLKTRQLDRLIGSRAQSLRRKLRLG"
     gene            5180..5914
                     /locus_tag="U1021_001372"
     CDS             5180..5914
                     /locus_tag="U1021_001372"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004253279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEM4711908.1"
                     /translation="MMKPKYERILIKLSGEALAGERGVGIDLKTVQEMAKEIQEVAES
                     GIQIALVIGGGNLWRGEPAAEAGMDRVQADYTGMLGTVMNALVMADSLKQLGVDTRVQ
                     TAIAMQSVAEPYIRGRALRHLEKGRIVIFGAGIGSPYFSTDTTAALRAAEIEADAILM
                     AKNGVDGVYNADPKKDANAVKFNELTHREVISRGLKIMDATASTLSMDNDIDLVVFNM
                     NEPGNIKRVVFGEPIGTTVSNSSEEK"
     gene            6049..6606
                     /gene="frr"
                     /locus_tag="U1021_001373"
     CDS             6049..6606
                     /gene="frr"
                     /locus_tag="U1021_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006148672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEM4711909.1"
                     /translation="MSKEIIAKAQERMNQSHQSLAREFSHIRAGRANASLLDRISVEY
                     YGSPTPLNQLAGITVPEARVLLITPFDKSILKDIERALNASDLGLTPQSDGTVIRLVI
                     PALTEETRKNLAKDVKKVGENSKVAIRNIRRDAMDEAKKAEKAKEITEDELKTLEKDI
                     QKVTDDAIKTIDKMTADKEKELLEV"
     gene            6738..7592
                     /gene="cvfB"
                     /locus_tag="U1021_001374"
     CDS             6738..7592
                     /gene="cvfB"
                     /locus_tag="U1021_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001095445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding virulence regulatory protein CvfB"
                     /protein_id="HEM4711910.1"
                     /translation="MNDLLAQYIVGLVTDENDQFYFVQKEGRTFALSKDEGEHSLGQS
                     VKGFAYTDMKQKLRLTTKEVGASRTSFGWGTVTEVRKDLGVFVDTGLPDKQVVVSLDI
                     LPEIKELWPKKGDQLYVKLDVDKKDRIWALPAFQEDFQKMAGPAYDNMQNQNLRAIVY
                     RLKMNGTFVYLPDNNMLGFIHPSERFAEPRLGQVLEARVIGYRAVDRTLNLSLKPRSF
                     EMLENDAQMILTYLESNGGFMTLNDKSAPEDIKATFGISKGQFKKALGGLMKAGKIKQ
                     DSLGTELV"
     gene            7602..8522
                     /locus_tag="U1021_001375"
     CDS             7602..8522
                     /locus_tag="U1021_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000964166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEM4711911.1"
                     /translation="MLVYIAGSGAMGCRFGYQLSKTNHEVILLDNWEEHIETILENGL
                     KVTGDVEETIQLPIMKPTEATREADFIILLTKADQLPKMLRDIKPIIGPTTKVLSLLN
                     GLGHATTMRRYVPDESIMVGVTMWLAGLKGPGHAHLEGPGSISVQHILGDEQSVADII
                     EMLNEAGLNVTYDNHVVSAIWQKACVNGVMNPTCTILDCTIGELFGTEAGLNLVQGIF
                     KEFIAVAKSEADGIDEEAIWKYVIDASKKASNHYPSMHQDLVQHGRKTEIDYLNGAVV
                     FKGKRAGIPTPYCQMITDMVHAKESMLGLR"
     gene            8532..8987
                     /locus_tag="U1021_001376"
     CDS             8532..8987
                     /locus_tag="U1021_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HEM4711912.1"
                     /translation="MLIEEETIEEYMAALPENRKEAVERLHQVIVEQLPAGFEVGILG
                     GMINYYVPLTAYPDGYHCTPGEPLPFLALASQKAHIALYHMGIYMDQELNDWFVAAYQ
                     AQVPTKLDMGKSCVRMKNPKNIPYELIGDLVSKMSMERYIELYEKNHRK"
     gene            8993..9208
                     /locus_tag="U1021_001377"
     CDS             8993..9208
                     /locus_tag="U1021_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001232073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YozE family protein"
                     /protein_id="HEM4711913.1"
                     /translation="MRRSFYSWLMTQRNPKSNEPVAILADYAFDESDFPKQSDNFDEV
                     SRFLEESASFAFSMSDFDAIWEDYLGH"
     gene            9287..10309
                     /locus_tag="U1021_001378"
     CDS             9287..10309
                     /locus_tag="U1021_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEM4711914.1"
                     /translation="MLEHSIDIQLKHPDDSFSLFGSNERHLRLMEQELGVVIHARTEK
                     VQVIGQEEPVEQARLVIQSLLVLVSRGLVINTPDVVTAISMAKNDEIEKFVALYEEEI
                     IKDNYGKPIRVKTLGQKLYVDSVKRHDIVFGIGPAGTGKTFLAVTLAVTALKRGQVKR
                     IVLTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYQILGKEQTTRLMEREIIEIAP
                     LAYMRGRTLEDAFVILDEAQNTTIMQMKMFLTRLGFNSKMIVNGDISQIDLPRKVKSG
                     LIDATEKLSKIPQIDFVHFSAKDVVRHPVVAQIINAYEEEARAADSRASFETIGEPSR
                     KYNGEE"
     gene            complement(10979..12127)
                     /locus_tag="U1021_001379"
     CDS             complement(10979..12127)
                     /locus_tag="U1021_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEM4711915.1"
                     /translation="MTTSRFQLVGSLLRPANLGEFKRQIEAREDIKYPFYDDFDGYKE
                     TEASLIQKIVAEQKENGLDIVTDGEFGRSMWHLDFLWGFDGIERYIAEHGYPFKDHDG
                     QIFETRKDIGLRITAPLSAKNHHFIDIFKQVKELAGETVTKQTIFGPAHAFNELTIFN
                     GQVGPNQVYKTRDELKAGLIAAYKEFLDQYKEAGGQIVQFDDCLWELFDPANPVPFLP
                     QDDSEALAALADEFVAINNAVIDYGHEIGLTVWTHNCRGNYESRSAAGGTYEAIAEKF
                     LRDQKYDRFFLEWDDERAGDLKALESLRDKNVEVVLGLLSSKTSDLDDEERVYKLLEE
                     ASKIIPKERLYLSHQCGFASCDSGNELAIPQQWAKIKQGQEIADKFWS"
     gene            12326..13492
                     /locus_tag="U1021_001380"
     CDS             12326..13492
                     /locus_tag="U1021_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM4711916.1"
                     /translation="MKKQSPFIIAGIVMLGVVMRAPFTALPAILTDVAAGLGVEVSSL
                     GILTSIPLIMFALCSSLAPRLAAKFGMEKLMALVLLVMVLGSGMRVLNLPALYIGTML
                     VGATIAFINVLLPSLVAANFPKKIGLYTTIYITLMGVAATVASMIAVPIVSSSSWEFF
                     ILLITGLVFMAFLIWLPNVKNNHRFASENQGNQKSSIWKNKAAIAFLIFGGLQSVLYY
                     TEITWLPTISQSVGFSKAEAGLMAGFFNMTAIPMSMIIPAVLSRQTKEMRRNIMLAIS
                     SVTLLGLVMMVLIPTNLILWSALHIILSFSNAALFPYMMLSFTLKTSNSQATAQLSGM
                     VQTGGYLIAAFGPGLLGYSYPIFGNWLPLILALAIVTLAMMWTIVLIEREDIIL"
BASE COUNT         4005 a         2519 c         3024 g         4002 t
ORIGIN      
        1 aattaacttt gatacatcgt cactttcggc ttgccgtact ctgcagaagt gacttgcttt
       61 gcaagttata tctccaacct agcacagcca ctaggctgtg ctagcaacct gcacctcagt
      121 tccttgtctg aaagctaatt cattcgacta tacatctaca tcgccttgtc tgatttagta
      181 taaaaaagaa tccccactgc gcctgcaatg gggatttatt atgccatcta tgaaaggatg
      241 gatgatttta ggattttaaa gtgaagaccg caataaccaa agctagatac atcaaaaagg
      301 tcaagataaa actagctcgc cagaaaacct tgaagaaacg gcgatataaa aaattctttt
      361 tctttaaaag gaagaaaccg caaagaccaa tcgctagtag tgagagggct aggacaagct
      421 gaggcagtag actgttatag taggccttgt ccgaaatcag ataaaattca attgcataga
      481 gaggaaaggc aatgtctgca aagttccatc ctcggttttg caacctaaaa aacttgacag
      541 caattatcga aatggccaag gttagaaaga taaataggaa ggctactatt tttaaaaata
      601 taatcgattc aaacatacat tcattctata aaaaatgtga aaaaaagtaa acctaaagct
      661 tgcatttctt tgaaattcgt gtataatgaa aaggtatgtg taaaacacat atttgtggga
      721 ggtaaaaatc tttaattacc gccaaaacca caataggagg attttatatc atggctaaaa
      781 aagtcgaaaa actcgtaaaa cttcaaattc ctgcaggtaa agctactcca gctccaccag
      841 tcggaccagc acttggtcaa gcaggtatca acatcatggg attcacaaaa gagtttaacg
      901 ctcgtacagc tgaccaagct ggtatgatca tcccagtagt tatctctgtg tatgaagata
      961 aatcattcac tttcatcact aaaacaccac cagctgctgt tcttttgaaa aaagctgcag
     1021 gtgttgaaaa aggttcaggt acaccaaaca aaactaaagt tgcaacagtt actcgtgcac
     1081 aagtacaaga aattgctgaa actaaaatgc ctgacttgaa cgctgcatct cttgaagctg
     1141 caatgcgtat gatcgaaggt actgctcgtt ctatgggatt cactgttact gactaagtag
     1201 cacccaagat tatctgatta caaggagaca tataacatgg ctaaaaaaag caaaaacttg
     1261 cgtgctgctc ttgaaaaaat cgacagcaca aaactttaca gcgtagaaga agctgttgct
     1321 cttgcaaaag aaactaactt cgctaaattt gatgcgtcag ttgaagttgc ttacaacttg
     1381 aacatcgacg tacgtaaagc agaccaacaa atccgtggtg caatggtatt gccaaacggt
     1441 actggtaaaa cttcacgcgt tcttgttttc gcacgtggtg ctaaagcaga agaagcaaaa
     1501 gctgctggtg cagactttgt tggtgaagat gacctcgttg ctaaaatcaa cggtggttgg
     1561 ttggacttcg acgttgttat cgcaactcca gatatgatgg ctgttgttgg acgtcttggt
     1621 cgtgtacttg gtccacgtaa cttgatgcca aaccctaaaa ctggtacagt aacaatggat
     1681 gttgctaaag cagttgaaga gtctaaaggt ggtaaaatca cttaccgtgc tgacaaagca
     1741 ggtattgtac aagctcttat cggtaaagta tcatttgacg ctgacaaact cgttgaaaac
     1801 ttcaaagctt tccacgatgt aatggctaaa gctaaaccag ctacagctaa aggtacttac
     1861 atgacttcag tatcaattac aacaacacaa ggtgttggta tcaaagttga tcctaactca
     1921 ctttaattaa tagaaagatt gtcttagggc aatctttttt ttgagatttt cttgacaagc
     1981 acttaatttc gatttatact atattcaatt tacataaaag gagttatccg atgaaagtag
     2041 cagagaaaga agagctttat aaataccttt ctgcagccta caaccttccg caggaagcat
     2101 tttcagaagc cctgcgtgaa aaaatattgg aggtagcagg tcagctggac aaggaggaaa
     2161 atctctatat actggcagga cacttaagtc gctttatcaa tgcagagtta acagctctga
     2221 cttgtcgagc gcctaaggaa ttggtgcaac tagcccatta ccttcaagag gttcaaaacc
     2281 attatcgcta tgctagtctt tttccaggaa aggtaaaata ggagaaaaca tgacagaata
     2341 tacaaaacca ctcgtttgga agtgggaaga tgaaaatgac aaccgatctg gcaaccgtcc
     2401 aacagcaggc agtcgctttg agcaagacct accaaaggga gagaagtctt tccaagtcta
     2461 ttcattagga acgccgaatg gcattaaggt tgctattatg ttggaggagt tgaaagagtt
     2521 aggtatttcg gaagctgatt atgacctctt tctcatcaat atcggtcaag gagaccaatt
     2581 tggctccgat tttgttgcca tcaaccccaa ctccaaaata ccagctatgg tagattattc
     2641 cgagcaagaa ccgatttcgg tctttgaatc agccaatatt ctactttacc tggcagaaaa
     2701 gtttgacgcc tttttaccaa aaacttgggc agagcggaca gaggttctta attggctctt
     2761 ctggcaaact ggcgccgctc catttgttgg tggaggattt ggacatttct tccattacgc
     2821 tccgacagcg caagaatatc cgattaatcg ctatacaatg gaaactaagc gtcagctgga
     2881 tctcttggat cagttattag cgactagaga atatgtagca ggtaacactt atactattgc
     2941 tgatatcgct atttggtctt ggtatggtcg cttggtgcaa ggagaactat atccaggttc
     3001 ggcagaattt ttagatgttg attcttacaa gcatctaaag acctgggtag agaaaatagc
     3061 tcagcgccca gctgtacaac gagggttgac agtgaaatat cattcaattg ataattaatt
     3121 gacttgccca ccttatgggt gggtttttct tttactttgg tatgataaaa gtttataatg
     3181 aaagagttag actttgtgaa aatccaaaaa tagaaattaa taattgatac tcaatgaaaa
     3241 tcagaattag actaggcgac gtagatgcag atagaactga agttcatcaa atcaagtcaa
     3301 caacgtttga ttttgatttt cgaagagtat gagtttttcc tgtcttatat ttacatagaa
     3361 agtaatagaa aaatgtccga aaaagttgaa atgcagcagt ccaaagaaca ggcgacaatg
     3421 gccagaggct tggcttggtt gactgctgga aatattctta gtcgcctgct tggtgttgcc
     3481 tatgttattc cctggtatat ttggttaggg gaatatcgag ctgaagccaa tgctctcttt
     3541 agtatggggt atcaaatcta tgccaacttc ttattgattt caacagctgg tcttccgaca
     3601 gctattgcca aacaagtagc taaatacaat gtcttgggta aagaagaggt gtcgctttac
     3661 ttggtcagag aattcttcaa gctcatgttg gtctttggag ctgtctttgc aggagtcatg
     3721 tatctaagtg ctccgtggtt ggcagacgca tcggggtcga aggaaaagtt acttccagtc
     3781 atgtatagtc tagtcccgcc tctctttatc ttcccagcca tgagtatttt gcgtggtttt
     3841 ttccaaggtc ggcacgatat gaagccctat gctatcagcc agcttgcaga gcagctggta
     3901 cgggttatct ggatactggc agcaacattt atgattatga agttgggtag cggtgactat
     3961 cttgaagcag ttgtccaatc tacctttgca gcttttgtcg ggatgattgc tagtgttggg
     4021 attttagttt atactttatg gaagcaaggt taccttggta agttgcttca tgctaagaaa
     4081 caaaagattt ctttggatac aggtcaactt attaaggaaa ctgttcgaga tgcgattcca
     4141 attatcattt taggtctaac gattcaatta ttgcagttta ttgaccaagt cacgtttatt
     4201 cgtgttatgg aaagaattac ggattacagt aattcggaac ttttggaact ttattcatat
     4261 atggctgcca atccaagtaa gattacgatg atgattatcg ggatttcact gagtttggga
     4321 agtgttgcta ttccattgat tacagagaaa tttgtcaaga aagatttgaa ggcggcgtct
     4381 catttagtgg cggataatct acaattactc tttatattca ctataccggc aattgttgga
     4441 acagtcctgt tagctgggcc actctatacg attttttacg gaccgtcaga gcctatcgcc
     4501 attactctat tcatttggaa cttattttta attttacctc tgggactata ttctgtcatt
     4561 agtgtggtca ttcaagcgat atttgaaaat agaagagcca tttattattt cttgattggg
     4621 atgctagtga aaatcgtttt acaagtacca atgatctatg tctttaaggt atatggtagc
     4681 tttatctcaa cgatatttgg gttgggaatt atgctgtacc tcttctatag acgaattgac
     4741 aaggttctgc atattgatga aagactagtg ataaaagata ttgcgaccat tagttggatt
     4801 tctatcgtaa tgggactcat tgtatggggg attgaatttg tcctgaatct tatccttcca
     4861 gcaaatggct atgtatctag ctttatccac ttggctgttg caggtggagc aggtatgctt
     4921 gtctttgtca tcttgacatt gaagactcgt cagctagatc gtttaattgg aagtcgggct
     4981 cagagtttac ggaggaaatt gcgcctaggc tagtttgttt taaagatctc tattttctac
     5041 tattgaaaag ctgggaaaaa gaggcgtttt agaatgtgag aaggaaagtt cgttgaggat
     5101 tttccttttt tcttggagat ttcagtataa aaaaaacggt ttttgtggta gaatagtagg
     5161 gataaaaaag aggagagaga tgatgaaacc taaatacgaa cgtattctaa tcaaactatc
     5221 tggtgaggcc ttggctggtg aacgtggtgt cggtattgac cttaaaactg ttcaggaaat
     5281 ggcaaaggaa attcaggaag tcgcagaatc aggtattcag attgcccttg ttattggtgg
     5341 tggtaacctt tggcgtggag aacctgctgc tgaagcgggt atggatcgag ttcaagcaga
     5401 ctatacaggc atgttgggga ctgttatgaa tgctcttgta atggctgatt cccttaagca
     5461 gcttggtgtg gatacacgtg tgcagacagc gattgcgatg cagtcagttg cagagcctta
     5521 tattcgtggt cgtgctcttc gtcatcttga aaaaggtcgc attgttattt ttggagctgg
     5581 tattggttct ccgtacttct caacggatac gacagcggct cttcgtgctg cagaaattga
     5641 agcggatgcg attttgatgg ctaaaaatgg tgtggatggc gtctacaatg ctgatccgaa
     5701 gaaagatgct aatgcagtta aattcaatga attgacccac cgtgaagtga ttagtcgtgg
     5761 tttgaaaatc atggatgcga cggcatcaac tctctcaatg gacaatgata ttgatttggt
     5821 cgtgttcaat atgaatgaac caggaaatat taaacgtgtt gtcttcggtg agccaatcgg
     5881 tactaccgtt tcaaattctt cagaagaaaa ataaatcata tcgtcattta gtttttcttt
     5941 tattacttcg ttaatttgcc ttgcctaact tcagttatgc ctgtggctcg ttgcctagta
     6001 ctaaaagtaa actaaaagac tgtaaaaaaa tacaaagaag gaagtcttat gtctaaagaa
     6061 attattgcta aagcgcaaga gcgcatgaac caatctcatc agagtttggc acgtgaattc
     6121 agccacattc gtgctggccg tgccaatgct agtttgttgg accgtatttc agttgagtac
     6181 tacggttctc caacgccatt gaaccagttg gctggtatta cagtgccaga agcgcgtgtt
     6241 ctattgatta ctccgtttga taagtcaatc ttgaaggata ttgagcgtgc tttgaacgct
     6301 tcagatcttg gtttgacacc gcaatctgac ggtactgtta tccgtttggt tattcctgcc
     6361 cttacagagg aaactcgtaa gaacttggcg aaggatgtga aaaaagtcgg tgaaaattca
     6421 aaagttgcca tccgtaatat ccgtcgtgat gccatggatg aagctaaaaa agctgaaaaa
     6481 gcaaaagaaa tcacagaaga cgagttgaag acgcttgaaa aagatattca aaaagtaaca
     6541 gatgatgcta tcaagacaat tgataaaatg actgccgaca aagaaaaaga attgttggaa
     6601 gtttaatcaa cacgttttta gactacaaaa atagatcatc actgggctgt ctaacttcca
     6661 gtggtgaacc aataagaaat ctaatggggg gagttagaca agacttcccc cactttttaa
     6721 tcagaaagaa gaaaatcatg aatgatttat tagcacaata tatcgttggt ttagtgactg
     6781 acgaaaacga tcagttttac tttgtccaaa aagaggggag aacctttgct ctttctaagg
     6841 atgaaggaga acatagtcta ggtcaatctg ttaagggatt tgcctatacc gatatgaaac
     6901 aaaaactccg tttgacaact aaggaagttg gggcgagtcg taccagcttt ggttggggaa
     6961 ctgtcacaga ggtacgtaag gatttgggtg tctttgtgga tacaggtctg ccagacaagc
     7021 aagtggttgt ttccttggac attttgcctg aaatcaagga actctggccg aaaaaagggg
     7081 atcagttgta cgtcaaatta gacgtcgata agaaggatcg catttgggct ctgccagctt
     7141 ttcaagaaga ttttcagaaa atggctggac ctgcttatga caatatgcaa aaccaaaatc
     7201 tgcgagcgat tgtctatcgt ttgaaaatga atggtacttt tgtttatttg ccagacaaca
     7261 acatgcttgg ttttatccat ccgagcgaac gctttgcgga accacgtctg ggtcaggttt
     7321 tggaggcgcg tgtcatcggc taccgtgcag ttgatcggac cttgaacttg tctctcaagc
     7381 cacgttcatt tgagatgctg gaaaatgatg cccagatgat attgacttat ctggaaagca
     7441 atggaggttt catgaccttg aacgataagt ctgctccgga agacatcaag gccacctttg
     7501 gtatttccaa agggcaattc aaaaaagctc ttggtggttt gatgaaggct ggaaaaatta
     7561 aacaggattc tttgggaaca gaattggtct agggggcgtc tatgctagta tatattgctg
     7621 gtagtggggc aatgggctgt cgttttggtt atcaattgtc taagacaaat catgaagtga
     7681 ttttgctgga taattgggaa gaacatatcg aaacgattct agaaaacggc ttgaaagtga
     7741 ctggagatgt agaggaaacg atacagctac ccatcatgaa accgaccgaa gcaacgagag
     7801 aagcagattt tatcattcta ttgactaagg ctgatcagtt gccaaagatg ttgcgggata
     7861 ttaaaccgat tatcggtcca actaccaagg ttttgagtct cttgaatggt ttggggcatg
     7921 cgacgaccat gcgtcggtac gtgccagatg aaagtattat ggttggggtg accatgtggt
     7981 tggcgggact aaagggtcct ggacatgctc acttagaagg tccgggttct atctccgttc
     8041 agcatattct tggtgatgag caatcagttg cggatattat tgaaatgctg aatgaagctg
     8101 gactaaatgt gacctatgac aatcatgttg tcagtgccat ttggcagaaa gcctgtgtca
     8161 atggtgtgat gaatccaact tgtaccattt tagactgtac aattggtgaa ttatttggta
     8221 cggaggctgg actgaatcta gtacagggga ttttcaagga atttatcgcc gttgccaagt
     8281 ctgaggcaga tggaattgac gaagaagcta tttggaaata tgttattgat gcctcgaaga
     8341 aggcttccaa tcactatcca tctatgcacc aggatttggt ccaacatggt cgaaagacag
     8401 aaattgatta tctgaatgga gcggttgttt ttaagggcaa acgtgcaggt atccctacgc
     8461 catactgtca gatgataaca gatatggttc acgccaaaga gagtatgctg gggttgagat
     8521 aggagaaagt catgctgatt gaagaggaaa cgattgaaga atatatggct gccttgcctg
     8581 aaaatcggaa ggaagcagtt gaacgactcc atcaagtgat tgtggaacag ttaccagctg
     8641 gttttgaagt aggcatcttg ggaggtatga ttaactatta tgtgccgctt actgcctacc
     8701 ctgatggtta tcattgcaca ccgggagagc ccctgccttt ccttgccttg gcatcacaaa
     8761 aggcacacat cgccctctac cacatgggaa tctatatgga ccaagaattg aatgattggt
     8821 tcgttgctgc ttatcaagca caggtgccta ccaaactgga tatgggcaag tcctgtgttc
     8881 gtatgaaaaa tcccaagaat attccttatg aattgattgg ggatttagtt agtaagatgt
     8941 ctatggagcg ctatatagag ctctacgaaa aaaatcatag aaagtagatg tagtgagaag
     9001 aagtttttat tcttggttga tgacccaacg caacccgaaa agtaatgaac cagtagctat
     9061 cttggcagat tatgcctttg atgaatctga ttttcctaag caatcagata atttcgatga
     9121 agtcagtcgt tttttggagg aatcggccag ctttgccttt tccatgtctg attttgatgc
     9181 gatttgggaa gattatttgg gacattgatg gataaaatag tacaaaatag ccttgtttgg
     9241 gctatttttg ttataatata gaaaagcaca ggaaaaggag caactcttgc tagaacattc
     9301 aattgatatt caactcaagc atccagatga ttcgtttagt ctattcggtt cgaatgaacg
     9361 ccatctgaga ttgatggaac aggaactagg tgtggttatt catgcccgta cggaaaaagt
     9421 gcaggtgatt ggacaggaag aacctgtaga acaggcgcgt cttgttatcc agtctctcct
     9481 tgtcttggtg agtcgtggtt tggttatcaa tacgccagat gtggtcacag ctatttccat
     9541 ggcaaaaaat gatgagatag agaaattcgt tgccctctat gaagaagaga ttatcaagga
     9601 caactatggc aaacccattc gcgtaaagac tcttggtcaa aaactctacg tggacagcgt
     9661 aaagcgtcat gacatcgtgt ttggaatcgg tcctgctggt acaggtaaga ccttcttggc
     9721 ggttactcta gctgtaacag ccctcaagcg gggacaggtc aagcgcattg tcctgacccg
     9781 tcctgcggtc gaggcaggcg aaagtttagg ctttttacca ggggacttaa aagaaaaagt
     9841 agacccttat ttgcgtcctg tctatgatgc cctataccag attttgggaa aggagcagac
     9901 cacgcgccta atggagcgcg agattatcga gattgcaccg ctggcctata tgcgggggcg
     9961 gaccttggaa gatgcctttg tcatcttgga tgaggcgcaa aatacgacca ttatgcagat
    10021 gaagatgttc ctgacccgtc tgggctttaa ttctaagatg attgtcaatg gggacattag
    10081 tcagattgac ctgccacgca aggttaagtc aggcctgatt gatgcgacag agaaactaag
    10141 caaaattccg cagattgatt tcgtacattt ttcagccaag gatgtggttc gtcacccagt
    10201 tgttgcccag attatcaatg cctatgaaga ggaggctcgg gcagctgata gtcgagcaag
    10261 ttttgaaacg attggggagc ctagtcggaa atacaatggt gaagagtagt tgtttcattg
    10321 gctgatatat aaaagaattg ttatgctagt tacatttgat atataataaa aagccttact
    10381 ggatgatact gtaagtgatg aaacaaacag gagcttagtc caaataagcg acttacacca
    10441 tatcgtaaaa tcacatcgta cagcaaatat caactatttg tcacaagtta taccaagcct
    10501 attgcccgac tcccttaaag cattgtcaca acgttgcttt gtcaacggta tcatataaat
    10561 ctattaaaat attgctagta cttcaagttg gattagagat taaatcttaa cgacattttc
    10621 gaaccagccc tcattatagc ggatagagat cataaaacct ataactttat ggattgttac
    10681 caataaaaag gctggttcta tctgattcgg attcgagatg ggaaaagcag catgaaaccg
    10741 agttttactc cctttctttt cgcatgttcg gcaccgataa gtatgaaacc ctcgtggcca
    10801 attgtgataa atctgtagcc tatataaaaa agccttcttt tgtgttgtcc gaacataaaa
    10861 tcccaagtat tacatcggaa aaatacttgg gattagatat catagattaa ctgatcagag
    10921 ttaacttaga gacactgatt gatgacaggg cttttatgca cgaataacaa gaagtggctt
    10981 aagaccaaaa cttgtctgca atttcttggc cttgtttaat ttttgcccac tgttgcggga
    11041 tggccaattc attacctgaa tcacatgaag cgaatccaca ttgatgtgac aagtagagac
    11101 gctcttttgg aataatcttg cttgcttcct cgagtaattt gtaaacacgt tcttcatcat
    11161 ccaaatcaga agttttactt gaaagtagac caagaacgac ttcgacattc ttgtcacgca
    11221 agctttccaa agcttttaaa tcacctgcac gttcatcatc ccactcaagg aagaatcgat
    11281 cgtatttttg gtcacgcagg aatttttcgg caatagcttc gtaagttccg ccagctgcag
    11341 agcggctttc atagttacca cggcagttgt gcgtccagac ggtcaagcca atttcatgcc
    11401 cgtaatcaat aacagcatta ttgatagcaa caaactcgtc agccaaagca gccaatgctt
    11461 cagaatcgtc ttgtggcaag aaaggtacag ggttagcagg gtcgaataat tcccaaaggc
    11521 agtcatcaaa ttgaacgatt tgtccaccag cttccttgta ctggtctaaa aattccttat
    11581 aggcagcgat gagcccggct tttaattcat cacgagtctt gtagacctga tttggtccga
    11641 cttgtccatt gaaaattgtc aattcattaa aggcatgggc tggaccgaaa atagtttgtt
    11701 tggttacagt ttctcctgct aattctttca cttgtttgaa aatatcaatg aaatggtgat
    11761 tttttgcaga aagtggagca gtaatacgca atccaatatc cttacgtgtt tcaaaaatct
    11821 gtccatcatg gtctttaaat ggataaccat gttcagcaat gtaacgctcg ataccatcga
    11881 agccccagag aaaatctagg tgccacattg aacgaccaaa ttctccatct gtcacaatat
    11941 ccaaaccgtt ttctttttgt tctgcaacaa ttttttggat gagtgaagct tcagtttctt
    12001 tgtaaccatc gaagtcatca tagaatgggt atttgatgtc ctcacgagct tcgatttgtc
    12061 gtttaaattc tcctaagttt gctggtcgaa gaagtgaacc gactaattgg aatcttgaag
    12121 ttgtcatatg tgtgtctctc tttcgtttta gtgatgaacc tattctaact cataagctat
    12181 catttgaaaa atagttattt tcatggcaaa tccatagtta aaaactataa ctagaaaaaa
    12241 tagacggaaa taactttcta tcatttgtca actatggtat aatcgaaagt gctgaaatcc
    12301 gaacattagg agacttagga gaaaaatgaa aaaacaatca ccctttataa ttgcaggaat
    12361 cgtcatgcta ggggtcgtga tgcgtgcccc ctttacagct ttacctgcta ttttgacaga
    12421 tgtggcagca ggactgggag tagaagtgag ttcattagga attttaacct ctattccgct
    12481 catcatgttt gctctctgtt catccttagc accgcgtctt gcggctaagt ttggcatgga
    12541 aaaactaatg gctctagtct tactggttat ggtgctgggt tcaggaatgc gagttctcaa
    12601 cttaccagcc ctttacattg gtacaatgct tgttggtgct acaatagcgt ttattaatgt
    12661 tttgctacca agtttggttg cggctaattt tccaaagaaa attggtctgt atacgacgat
    12721 ttatatcact ctcatggggg tggcggcaac agttgcatct atgattgctg ttccaattgt
    12781 ctcctctagt tcttgggaat tttttattct attaattaca ggattggtgt ttatggcttt
    12841 cctaatctgg ttgcctaatg taaaaaataa ccatcgattt gcaagtgaga accaaggaaa
    12901 ccagaaatca tctatctgga aaaataaagc agcgattgcc tttttgatat ttggtgggtt
    12961 acaatcagtc ctctactata cagagattac ctggttgcca actatttctc aatcagttgg
    13021 ttttagtaag gcagaagcag ggctaatggc tggcttcttc aatatgacag ctattcccat
    13081 gtctatgatt atcccagctg tcctttcccg tcagacaaaa gaaatgcgtc gaaatatcat
    13141 gctggctatt tcatctgtta ccttgcttgg tttggtcatg atggtattga ttccgaccaa
    13201 tctcattctt tggtcagcgc ttcacattat tttaagtttt tcaaatgcag ccctcttccc
    13261 ttatatgatg ttgagcttta ctttgaaaac aagcaacagc caggcgactg cccagttatc
    13321 aggaatggtg cagacaggtg gctatctcat tgcagcattt ggaccaggcc ttctcggtta
    13381 tagctatcca atcttcggaa actggctgcc attgattctt gctctggcta tcgtcacact
    13441 tgccatgatg tggactattg ttctcattga aagagaagat attatcttat aaagtataat
    13501 cccttaagaa ggctggcatt tttctgtgaa aatggcagag cttctaaggg
//
LOCUS       DASFQD010000062        13445 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.062, whole genome shotgun sequence.
ACCESSION   DASFQD010000062 DASFQD010000000
VERSION     DASFQD010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 13445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13445
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.062"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(128..403)
                     /locus_tag="U1021_001381"
     CDS             complement(128..403)
                     /locus_tag="U1021_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002950996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEM4711917.1"
                     /translation="MANKQDLIAKVAEATSLTKKDSAAAVDAVFGAVADYLAAGEKVQ
                     LIGFGNFEVRERSARTGRNPQTGAEIKIAASKVPAFKAGKALKDAVK"
     gene            complement(493..1089)
                     /locus_tag="U1021_001382"
     CDS             complement(493..1089)
                     /locus_tag="U1021_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpmS family protein"
                     /protein_id="HEM4711918.1"
                     /translation="MRPRKAGNLNIWKWLFLAQLALLIGCGIVLYTRIQTDREDLTKL
                     VQTSTEDTKVGTFSTNREQLNQTLTNYLKEYQTEEFSYQLFVTSQQVVFEGSYQIFGV
                     TIPLYIYFQPSKIEDGSILLRITEISVGSLSLPKAEVLAYLQKNYKLPAFVKIDSEQA
                     QVQVQLTELKNKFGLYGKANTIDLYNDQFIVDIYRKRQ"
     gene            complement(1061..1894)
                     /locus_tag="U1021_001383"
     CDS             complement(1061..1894)
                     /locus_tag="U1021_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEM4711919.1"
                     /translation="MNNRKLIQGFVFFFLAILGSIFLFHQLIPVASSRISRQELTVSE
                     KISFRYVALGDSLTEGVGDTTGQGGFVPLLAQSLTNDYGYEVDYKNFGVSGNTSNQIL
                     KRMKEDGELISYLKTADLLTLTVGGNDLRKAIIKNIANLKVSTFDKPAKDYGKRLDTI
                     IKTARKNNPNLPIYVVGIYNPLYLNFPELTEMQTIVDNWNTMTEQITEKYQHVYFVPI
                     NDLLYKGLEGEAGISQNGSQVTNNLLYEEDSFHPNNTGYEIMKKAILERMNETTESWE
                     P"
     gene            complement(1887..2720)
                     /locus_tag="U1021_001384"
     CDS             complement(1887..2720)
                     /locus_tag="U1021_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEM4711920.1"
                     /translation="MSKIKIVTDSSTTIEPSLVEELNITVVPLSVMVDGVVYSDNDLK
                     EGEFLELMRGSKNLPKTSQPPVGLFAETFADLAKDGSQIIAILLSHALSGTVEAARQG
                     ATLSGADVTILDSSFTDQAEKFQVVEAARMAQAGASKEEILAAIETVKEKTELYIGVS
                     TLENLVKGGRIGRVQGMLSSLLNIRVIMEMKDHQLTPIVKGRGNKAFKKWLEEFTATL
                     ADKKVAEIGISYSGTADFANEMKSQLQEYVSKEVSVLETGSIIQTHTGEDAWAILIRY
                     E"
     gene            complement(2814..4475)
                     /gene="recN"
                     /locus_tag="U1021_001385"
     CDS             complement(2814..4475)
                     /gene="recN"
                     /locus_tag="U1021_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEM4711921.1"
                     /translation="MLLEVSIKNFAIIEQVSLNFENGMTILSGETGAGKSIIIDAMNL
                     MLGARATTDVIRHGAAKAEIEGLFSFENSRALEQILLEQGIEVADELIIRREILQNGR
                     SVSRVNGQMVNLSVLKQIGQYLVDIHGQHDQEELMKSQHHIRLLDSFGEDEFWSLKDR
                     YQTTFDAYRSLRKRVLEKQKNEQEHKARIEMLEYQIAEIEAADLKSGEDIQLNQERDK
                     LLNHKQIADTLTNAYALLDNEDFSSLNNLRSAMSDLQSLEEFDPDYKQLSSSLTEAYY
                     VVEDVTKRLSDVVDNLDFDGNRLLQLESRLDLLNTITKKYGGTVDDVLDYFSKISEEY
                     NLLTGNDLSGDDLEVQLKNLEKELVERAGQLSQSRHELALVLEDIIRQELQDLYMEKA
                     RFQVRFTKGKFNREGNETVEFYISTNPGEDFKPLVKVASGGELSRLMLAIKSAFARKE
                     GKTSIVFDEVDTGVSGRVAQAIAQKIYKIGQYGQVLAISHLPQVIAIADYQFFIEKIS
                     DEHSTVSRVRLLTKEERIEEIAKMLAGDKITDAARNQAKELVEKG"
     gene            complement(4478..4903)
                     /locus_tag="U1021_001386"
     CDS             complement(4478..4903)
                     /locus_tag="U1021_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HEM4711922.1"
                     /translation="MNKRERLEVIKDLVVRFPIDTQEEIVERLEAMGVNATQATVSRD
                     IKELGIIKVPSADKGYIYGLPKAGLVKVKSQNVFEVSVMDKMINLRLVPGSSAVVKRR
                     ILEQFQEHVFSVIADDDSILLIVTNEGIISQIEQTVRGW"
     gene            complement(4896..5717)
                     /locus_tag="U1021_001387"
     CDS             complement(4896..5717)
                     /locus_tag="U1021_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HEM4711923.1"
                     /translation="MAKERVDVLAFKQGLFETREQAKRGVMAGLVVSVINGERYDKPG
                     EKIDEGIELKLKGEKLKYVSRGGLKLEKALQVFDLAVEGQTTIDIGASTGGFTDVMLQ
                     AGAKQVYAVDVGTNQLAWKLRQDDRVISMEQYNFRYAELEDFELGQPSFASIDVSFIS
                     LSLILPALHRILVDGGQVVALVKPQFEAGREYIGKNGIVKDKAVHLKVLEDVTAMAIE
                     NGYSVKALNFSPVQGGHGNIEFLAYLEKTNEPVQIDKQEITNIVYQAHEEFKKDE"
     gene            complement(5710..6582)
                     /locus_tag="U1021_001388"
     CDS             complement(5710..6582)
                     /locus_tag="U1021_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000256278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEM4711924.1"
                     /translation="MVDVKRIDQEIRDFYYNRGTIVSEELIDAILYSIDGGGKRIRPV
                     LLLQIVEGFGVELQQAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDE
                     ATAILAGDSLFLDAFGLLSLADLPNQVLLELVQLMSLASGTFGMVGGQMLDMLGEGKK
                     LEIFDLINIHSNKTGRLLTFPFHAVGIITQQPSSVVGSLWQAGMLIGHAFQVRDDILD
                     VTADFDELGKTPRKDLAAEKATYPSLLGLEESKFIVQDSLNKAVAIFKELEEHNGFKG
                     QEVYQLIESLRING"
     gene            complement(6582..6797)
                     /locus_tag="U1021_001389"
     CDS             complement(6582..6797)
                     /locus_tag="U1021_001389"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002963102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEM4711925.1"
                     /translation="MSKQTKTFEENLAELEGIVTKLERGDVALEEALAEFQKGMVLSK
                     DLQKTLAAAEKTLVKVMQADGSEAEMD"
     gene            complement(6772..8115)
                     /locus_tag="U1021_001390"
     CDS             complement(6772..8115)
                     /locus_tag="U1021_001390"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEM4711926.1"
                     /translation="MVEYLSVSHLTKYLKLKFDRDPYLEKVYLTGQVSNFRKRPSHQY
                     FSLKDDKAVIQATMWAGVYKNLGFELEEGMKINVIGRIQLYEPNGSYSIVIEKAEPDG
                     IGVLAIKFEQLKQALTQEGLFKEEFKQALPRFTKKIGVITSPSGAVIQDIITTVSRRF
                     PGVEIVLYPTKVQGDGAAQEVVANIQRANERDDLDVLIVGRGGGSIEDLWAFNEEIVV
                     RAIFESRIPIISSVGHETDTTLADFVADKRAATPTAAAELATPVTKADLLGYLNQQEN
                     RAYQAMTNRLKFLRGQLEKISQSVMFRQPERLYDGYLQKLDRLTNQLQTRMKELYSQQ
                     KQASLLLQQRLQGVHPGRKVESFQERIIQQERLLKSNMANIYDNKMAKADKLIEALTM
                     LDTSRIVARGYAMIRQDGRVIDSVENVQIGENLTIQMKDGQLDVEVKHVQTDENI"
     gene            8281..9189
                     /locus_tag="U1021_001391"
     CDS             8281..9189
                     /locus_tag="U1021_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HEM4711927.1"
                     /translation="MKIDDLRKSSNIEDRRGQSSSNSSFLSGSSGGNVLLGLLFSRLG
                     WKGKLLVLVLLVAFGGMSNLGGLLSPSTRTNPYQSSQVTTTGTDMSDADAEFMSKVLG
                     STEDFWVQEFKANGLTYNAPTMVFYTNQTQTGCGVGSAQAGPFYCSADRKIYIDTSFY
                     QELSSKYKAAGDFAMAYVIAHEVGHHVQNELEVLGAYHQKRAQLSDKEGNALNVRLEL
                     QADYYAGAWAKYVDGHGILDAGDIDEAMNAAHAVGDDTLQQEAYGRTVPDSFTHGTSE
                     QRKKWFNLGYTYGDLAHADTFSVEKP"
     gene            complement(9398..9949)
                     /locus_tag="U1021_001392"
     CDS             complement(9398..9949)
                     /locus_tag="U1021_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HEM4711928.1"
                     /translation="MVVFLVICIFLVRIYFLKISIKNEKRILKNGGSEFGVQNTKLLT
                     VVHILFYLSCLVEAVVRHAKFDTLSSLGLIFLLFSMGMLFWVTRLLGDIWTVKLMLVK
                     DHRFVDHWLFRVVKHPNYFLNIIPELIGLALLCHATYSFLILFPVYMVILYRRIHEEN
                     NLLKTVIIPNGTVQSAAEITGNN"
     gene            complement(10345..11733)
                     /locus_tag="U1021_001393"
     CDS             complement(10345..11733)
                     /locus_tag="U1021_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEM4711929.1"
                     /translation="MGIARKNFIIVAAMISFISVTLLGLLYYAMPIYYNQVKKQELRH
                     DYMTVAKQLDGMPEAKIISEIDDFDIKTPNIIISLFSSDRKIIYPDPNDEMAKKHENE
                     YLENGDFDEIGSWGAEITSAEGVTYYLLFNYGFHSLSDVSQTLVTFYPFILLLIIVLA
                     VSVAFVYSRLSTRRIARISETTRRMQSLESGISCAVAGTDEITILAQDINSLYSKLLS
                     SIDELRTENERAMAREKEKSDFLRITSHELKTPIASMLGLVEGMIYNVGPFKDHDTYL
                     KKCKEILQEQSELVHSILEATNLDMALKESREQIRLDQLIDSSLTSYQSLAEVKGYQF
                     EVELSPVLIEANPVYFLKAIKNILDNAFRYSCKEAIIRVVLRQNQLIIENQVERVLSD
                     EELDQVFRPFYRPDYSRDKKDGGIGIGLFIIQKILEKHGFPYTFYASDTQTMRFMIHL
                     QSQSTANSNELI"
     gene            complement(11735..12385)
                     /locus_tag="U1021_001394"
     CDS             complement(11735..12385)
                     /locus_tag="U1021_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4711930.1"
                     /translation="MSRILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEE
                     QFDLIVLDIMIPSMTGLEVLKEIRKTSQIPILMLTAMGDEYTQLISFNQIISDYVVKP
                     FSPTILVKRIENILRGKGETDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLA
                     KRRGKIVSRDNLMMGIWGYTELDSRVLDNHIKNIRKKLPSLPLKTIVGRGYQIEGT"
     gene            12617..13318
                     /locus_tag="U1021_001395"
     CDS             12617..13318
                     /locus_tag="U1021_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4711931.1"
                     /translation="MWSPKKLTVLKWFDILILTIILFGDGIINSTLQYIALQNQTTTL
                     QENLTFSTMDNYKALALQLVWLTIAIFYLLLRNFDFSIWKKHIFITPWVPLQAVALFI
                     FSALCLDIYNLVSYQFLASNTPSMFQLFPNIDLPLILYSLLNGFYEEIFFLNLCLLVN
                     PKYAKWAFLYSLIIRCSFHTYQGLISALGLGLILGTIFYLLYQKIKPKNLLPFFLAHA
                     AADIIGLTVLSYILY"
BASE COUNT         3922 a         2978 c         2266 g         4279 t
ORIGIN      
        1 ggagccccaa aacacagaaa aaagcccatc acacaagcta aaaagcttga tatgacgggc
       61 tttttgatgc ttagcctcgc tcttttgttt ttaagcgagg gataaaacag tctattccca
      121 gactgtttta ttttaccgca tccttaagag ctttaccagc tttgaatgct ggaacttttg
      181 atgctgcgat tttgatttct gcacctgttt gagggttgcg gcctgtacgt gctgaacgct
      241 cacgaacttc aaagttaccg aaaccgatca attgtacttt ttcaccagct gcaaggtagt
      301 ctgctactgc tccgaatact gcatcaacag ctgctgctga gtctttttta gtcaatgaag
      361 ttgcttctgc aacttttgca atcaaatctt gtttattagc catttgctaa gtcctccaat
      421 aattttctga gttattactc acttctatat agtaccgaat tttaggcgtt tggtcaagtt
      481 tttaatgcta ttttactgtc tttttctgta gatatcaaca atgaattggt cgttgtacaa
      541 atcaatcgta ttcgcctttc catacagacc aaatttgttc ttcagttctg tcagttgaac
      601 ctgtacttgc gcttgttctg agtctatttt tacaaaggca ggtagtttat aatttttttg
      661 taaataagct aatacctctg ctttcggcaa ggataaactt ccaactgata tttctgttat
      721 ccgtaacaaa atactgccat cttcaatttt gctaggttga aaataaatat agagtgggat
      781 agtcacacca aaaatctgat agctgccttc aaaaacaact tgctgactcg ttacgaataa
      841 ttgataggaa aactcttccg tctgatactc ttttagatag ttagtgaggg tttggttgag
      901 ctgttcccta ttagtggaga aggtcccaac cttggtatct tctgtactag tctgaacgag
      961 ctttgttaaa tcctctctat ctgtttgaat ccgtgtatag aggactattc cgcaaccaat
     1021 caataaagcc aactgggcta aaaataacca tttccaaata ttaaggttcc cagctttccg
     1081 tggtctcatt cattctctcc aatatcgctt ttttcataat ctcatatcca gtattattgg
     1141 gatggaaact gtcttcctca tacagtaaat tattggtaac ttggctacca ttttgactaa
     1201 taccagcctc cccttccaat cctttataga gcaaatcatt gatcggaaca aagtagacat
     1261 gttgatattt ttcagttatc tgttctgtca tcgtattcca attatcaaca attgtctgca
     1321 tttctgtcaa ttcaggaaaa ttgaggtaga gtggattgta aatcccgaca acatagatgg
     1381 gaagatttgg attattctta cgcgctgtct taataatcgt atccaatcgt tttccgtaat
     1441 cttttgcggg cttatcaaaa gttgaaactt tgagattggc aatgttttta ataatagcct
     1501 tgcgcaaatc attgccacca actgtcagag ttaacagatc tgctgttttt aagtaactta
     1561 tcagctctcc atcttccttc attcgcttaa gaatctgatt actggtattt ccagaaactc
     1621 cgaaattttt ataatctact tcataaccat aatcgttagt tagagattga gccaacaagg
     1681 gaacaaagcc cccctgtcca gttgtatctc caacaccttc tgtcaaagaa tcaccaagtg
     1741 ccacatatcg aaaactgatt ttttctgata cggtaagctc ttgtctggag atgcgagatg
     1801 aggcaacagg aatgagctga tgaaatagaa aaatcgaccc tagaattgcc agaaaaaaga
     1861 aaacaaagcc ttgaatcaac ttcctgttat tcataacgaa tcaaaatagc ccaggcatcc
     1921 tcaccggtat gagtttgaat aatggaacct gtctctaaga cagaaacttc ttttgagacg
     1981 tactcttgta attgactctt catttcattt gcaaaatcag ccgttcctga ataggaaata
     2041 ccaatctcgg ctactttttt atctgctaga gttgccgtga actcttccag ccatttttta
     2101 aaggccttat tgcctcgtcc cttgacaatc ggagtcagct gatggtcttt catttccatg
     2161 ataacacgga tattgagtag gctactcagc atcccttgaa cacgtccaat acgaccaccc
     2221 ttgactagat tttctagggt tgatacaccg atgtataatt ccgttttttc tttgactgtt
     2281 tcaatagctg caaggatttc ttctttgctg gcaccagctt gtgccatgcg tgctgcttct
     2341 acaacttgga atttttcagc ctgatctgta aagcttgaat cgaggattgt cacatcagca
     2401 ccagaaaggg ttgctccttg tctagcagct tctactgtcc ctgacaaggc atgcgacaag
     2461 agaatggcaa taatctgact gccatcttta gccaagtcag caaaagtttc cgcaaagagt
     2521 cctactgggg gctggcttgt ttttggcaag tttttcgacc cacgcatgag ctctaagaac
     2581 tctccttctt ttaaatcgtt gtcagagtat acgactccgt caaccattac agataatgga
     2641 acaactgtta tattcaattc ttcgaccaaa ctgggttcga tagtcgtact tgaatccgta
     2701 acaatcttaa tctttgacat atttcatcct acaattctct tcaattttgc catctattat
     2761 aacaaatttt aactaaaaaa taaactttgg acataagcaa aaaggctagt cgcctaacct
     2821 ttttctacta attcttttgc ttgattacgg gctgcatctg tgattttgtc accggctaac
     2881 atcttggcaa tttcctcaat acgctcttct ttggtcaaga gacggacacg agaaacagtc
     2941 gaatgttcgt cggatatttt ctcaataaag aactgataat ctgcaatagc aatgacttgt
     3001 ggtagatgag aaatcgccaa tacttgacca tattgtccga ttttataaat tttctgggca
     3061 attgcctggg ccacacgtcc agacacccct gtatccacct catcaaagac aatagaagtt
     3121 ttaccttctt tacgggcaaa ggctgactta atggccaaca tcaagcgaga caattctcct
     3181 ccagaagcta ccttaaccag tggtttgaag tcttcacctg ggttggtaga gatgtaaaat
     3241 tctactgttt catttccttc tcgattaaat tttcctttag taaatcgaac ttggaaacga
     3301 gctttctcca tatacaagtc ttgcaattct tggcgaataa tatcttctaa aacaagagcc
     3361 aattcatggc gtgattggct gagctgacct gctcgttcaa ccaattcttt ctctaagttc
     3421 ttaagctgaa cttccaaatc atcaccagat aaatcattgc ctgtcaatag attgtattct
     3481 tcactgattt tactaaaata gtccaaaaca tcatcgacag ttccaccata tttcttcgta
     3541 atggtattga gcaaatccag gcgactttct aattgcaaga gacgattgcc gtcaaagtct
     3601 agattatcca ccacatcgct gagacgcttg gtcacatctt caacgacata ataagcttct
     3661 gtcagactag aagagagctg tttgtagtct ggatcaaatt cttccagact ttgcaagtca
     3721 ctcattgctg agcgtaggtt gttcaagctt gaaaaatctt cattgtctaa cagtgcatag
     3781 gcattggtca gtgtatctgc aatttgtttg tggttgagca gtttatcgcg ttcctgattg
     3841 agttgaatat cttcaccaga cttcaaatcc gctgcttcga tttcagcaat ttggtattct
     3901 agcatctcaa tccgcgcctt gtgttcttgc tcattttttt gcttttcaag aactcgtttg
     3961 cgaagactac ggtaagcatc aaaggttgtc tgataacggt ctttaagact ccaaaattca
     4021 tcttctccga aactgtccaa aagacggata tggtgttggg acttcatcaa ttcttcctgg
     4081 tcatgttgac catgaatatc tactaaatat tgcccaatct gtttcaagac agataaattg
     4141 accatttgtc cattgacacg actgaccgaa cggccatttt gtaggatttc acgacggata
     4201 atgagctcgt cagctacttc aatcccctgt tcaagcaaaa tctgctcgag agctctgcta
     4261 ttttcaaagg aaaaaagccc ttcaatctca gccttggcgg ccccatgtct gataacatct
     4321 gtcgtcgcac gcgcccctag catcaggttc atggcgtcga tgataatgga tttacctgca
     4381 cctgtttcac cagataggat ggtcatcccg ttttcaaaat tcagtgatac ctgctcaata
     4441 atggcgaagt ttttaatgga cacttctagt aacatggcta ccaccctcta accgtctgtt
     4501 cgatttgcga aataatgcct tcgtttgtaa caatgagcag aatactgtca tcatcagcaa
     4561 tcactgaaaa aacatgttct tgaaattgtt ccaaaatccg gcgtttgacc acagcagagc
     4621 ttccaggtac cagacggaga ttaatcattt tatccatcac tgagacttca aaaacattct
     4681 gcgattttac cttaacaaga cctgcctttg gtaaaccata aatatatccc ttatccgctg
     4741 atggaacctt aataatgcca agttccttga tatcacgtga aaccgttgct tgtgtcgcat
     4801 tgacacccat tgcttctaga cgttcaacaa tttcttcctg tgtatcaata ggaaatcgga
     4861 ctaccaaatc tttaatgact tctaatcgtt ctcgtttatt catccttttt aaattcctca
     4921 tgtgcttgat agactatatt tgttatttcc tgcttatcaa tttggactgg ctcatttgtt
     4981 ttttctaaat aagccaaaaa ttcgatattg ccgtgacctc cttgaacggg agaaaaattg
     5041 agcgccttga ctgaatagcc attttcgata gccatcgcag taacatcttc taggactttc
     5101 aagtgaactg ccttatcttt tacaatccca ttcttgccaa tatactcacg acctgcttca
     5161 aactgtggtt taaccaaggc tacaacctga ccaccatcca ctaatatacg atggagtgct
     5221 ggcaaaatca gactcaatga gataaagctg acgtcaatgg acgcaaaact tggttgacca
     5281 agttcgaaat cttccaactc agcatagcgg aaattgtact gttccatgct gatcacgcga
     5341 tcatcttggc gcaatttcca agcgagttga ttggtaccga catccacagc atagacctgc
     5401 ttggcaccag cctgcaacat gacatctgta aagccacctg ttgaggctcc aatatcaatc
     5461 gtcgtttgcc cctcaactgc taggtcgaaa acctgcaagg ccttctccaa tttcagaccg
     5521 ccacggctga catacttgag tttttcacct ttgagtttga gctcaattcc ttcatcaatc
     5581 ttctcaccag gtttatcgta gcgttccccg ttgatgacgg atacaactaa gccagccata
     5641 acaccacgtt tggcctgctc ccgcgtctcg aaaagcccct gtttaaaagc tagtacatct
     5701 actctttcct tagccattga ttcgtaaact ttctatcaat tgatacactt cttgcccctt
     5761 aaagccattg tgttcttcta attccttaaa aatggccacg gccttattca atgaatcctg
     5821 aacaatgaat ttggactctt ctaaccctaa caagcttgga tatgttgctt tttcagccgc
     5881 caaatctttc cgaggcgttt tgcccaattc atcaaaatct gccgttacat ctaaaatatc
     5941 atctcgaacc tggaaggcat gaccaatcaa catcccagct tgccacaagg aaccgacaac
     6001 ggaactaggc tgttgcgtaa taatccctac tgcatgaaat gggaatgtca ataatcgacc
     6061 tgtcttgttg ctatggatat ttatcaggtc aaaaatttcc aatttttttc cttcacctag
     6121 catgtccagc atttgaccac cgaccatccc aaaggttcca gatgctaatg acataagctg
     6181 taccaattca agtaaaacct ggtttggcaa atcagccaga gacaggaggc caaaagcgtc
     6241 caaaaagagg ctatcgcctg ctaaaatagc tgtcgcttcg tcaaatttct tatgattggt
     6301 gagtcgacct ctacggtaat catcatcatc catggcagga agatcatcgt gaatcaggct
     6361 tcccgtatga atcatctcta aggcagcggc cacttggtag tgggcttgct gtaattctac
     6421 cccaaatcct tccacgattt gaagcaataa gaccggtcga atccgctttc caccaccatc
     6481 aatcgaatac aaaatcgcat caattaattc ttccgaaaca attgttccac ggttgtaata
     6541 aaaatcgcga atttcctgat caatccgttt cacatcaacc attaatccat ctccgcttca
     6601 ctgccatccg cctgcatgac cttgaccaag gtcttttcag ctgcagctag tgtcttttgt
     6661 agatctttcg atagaaccat ccctttttga aactcagcaa gtgcttcttc cagagccaca
     6721 tcgcctcgct ctaatttggt tacgattcct tctaattcag ctagattttc ttcaaatgtt
     6781 ttcgtctgtt tggacatgtt ttacctccac atcaagttga ccatccttca tctggatggt
     6841 taggttttca ccaatttgta cattttctac actatcgatc acccgaccat cttgacgaat
     6901 catggcgtag ccacgggcca cgatgcgact ggtatccagc atagtcaagg cctcaatcag
     6961 cttgtccgcc ttggccatct tattgtcata gatattagcc atattgctct tcaagagtcg
     7021 ttcttgctgg ataattctct cttggaaact ctctacttta cgacctggat gcacaccttg
     7081 taatcgttgc tgtagtagga gactagcctg tttctgctgg ctgtagagtt ctttcatccg
     7141 tgtctgcaat tgattggtca agcggtctaa tttttgtaaa taaccatcat acaagcgttc
     7201 aggctggcgg aacatgactg actggctaat tttctcaagc tggcctctta ggaatttcaa
     7261 acgattggtc atggcctgat aggctctatt ttcctgctga ttgaggtagc ccagtaagtc
     7321 tgccttggtc acaggtgttg ctaattctgc ggcagctgtt ggagtggcag ctcgtttatc
     7381 tgctacaaaa tcagccagag tcgtatcagt ttcatgacct acgctggaaa tgattggaat
     7441 acgggattca aaaatagccc gaaccacaat ttcttcatta aatgcccaaa ggtcttcgat
     7501 agaaccacca ccacggccaa caatcagaac atccaagtca tcccgttcat tggctctttg
     7561 aatattggcg acaacttctt gagcagcccc atctccttgc accttggtcg gatagagaac
     7621 aatctctacg cctggaaaac gtcggctaac ggttgtaata atatcctgaa taacagctcc
     7681 actcggactg gtaatgacac cgattttctt ggtaaaccgt ggcaaggctt gcttgaattc
     7741 ttctttaaat aaaccttcct gtgtcagagc ttgtttgagc tgttcaaact tgattgccaa
     7801 gactccaata ccatctggct cagctttttc aatgacaatg gaataggaac catttggttc
     7861 atagagctga atgcgcccaa tgacattgat tttcattccc tcttcaagct caaagcccag
     7921 attcttatag acgcctgccc acatggtcgc ttggatgact gccttgtcat ccttgagcga
     7981 aaaatattga tggctagggc gtttacggaa gttggacact tgacctgtca aatacacctt
     8041 ctccaaatac ggatcgcggt caaactttaa ttttaaatac ttagttagat gactaaccga
     8101 taaatattca accatgtcca ctccttctat attgtatccc tactattata ccaaattttg
     8161 cacttttata cagaactatg cctattattt ccgatagctt tcctgtgttt tttctgcgtt
     8221 ttactatata atagcttgtg agaaaataag aacttgttga caggttctaa ggagatttat
     8281 atgaaaattg atgatttacg aaaaagttct aacattgagg accgcagggg acaatccagt
     8341 tctaactcat ctttcttgtc tggttcatct ggaggaaatg ttctattggg actactcttt
     8401 tcacgacttg gttggaaagg aaaactactt gttcttgtcc ttttagtagc cttcggaggc
     8461 atgtcaaacc ttggtgggct gctttccccc tcaacaagga ctaatcctta ccaatcgagt
     8521 caagtcacaa caactggtac agatatgtct gatgcagatg ctgaattcat gagtaaggtt
     8581 ttaggatcga cagaagattt ttgggtccaa gaatttaaag ccaatggttt aacctacaat
     8641 gcaccgacta tggttttcta tactaaccag acccaaactg gatgtggagt gggttccgcc
     8701 caagccggtc cattctattg ctctgctgac cgcaagattt atattgatac ttctttctat
     8761 caagaattgt ctagcaagta taaggctgct ggtgactttg ccatggctta tgtcatcgct
     8821 catgaagttg gtcaccatgt ccaaaatgaa ttagaagttc ttggggccta ccatcaaaaa
     8881 cgggctcaac tatccgataa ggaaggcaat gcgctaaatg ttcgcttaga attgcaagct
     8941 gactattatg caggagcctg ggccaaatat gttgatggac acggcatctt ggatgctggt
     9001 gatattgacg aagctatgaa tgctgcccac gcagttggtg acgacactct tcaacaggaa
     9061 gcctacggtc gtactgttcc agacagtttt acccacggca cttctgagca aaggaaaaaa
     9121 tggtttaatc tcggttatac ctatggtgac cttgctcacg ccgatacatt ctccgtagag
     9181 aaaccgtaaa catccatagc ctctcgtagc aataaagaaa ctcttgcaac atacactttt
     9241 gcaagagttt ctttataata tacaactgac agaagccaat ttacacatac ggtaccactt
     9301 ttaaatatga aaactgaatc atgtaaactt actcatcaac tctaattaga gcggtatcct
     9361 agtttcaaac aatatcacaa ttattattta gcaaacttta attatttcca gttatctctg
     9421 ctgcagactg cacagttccg tttggaataa tcactgtttt caacaaatta ttttcctcgt
     9481 gaatacgtct gtataagata accatgtaga ctgggaataa gatgagaaaa ctatatgttg
     9541 catgacacaa taaagctaaa ccgattaatt ctggtataat atttaggaaa tagttaggat
     9601 gctttacaac acgaaacaac caatgatcaa caaaacgatg atcttttacc aacatgagct
     9661 taactgtcca aatatcacct aacaatcgtg ttacccaaaa taacattccc attgaaaaca
     9721 gcaagaatat caaacctaag ctactaagcg tatcaaactt ggcgtgtcgc actactgctt
     9781 caaccaaaca tgataaataa aatagaatat gtacaactgt taataattta gtattttgaa
     9841 caccaaattc tgaaccgccg tttttcaaaa tccgtttttc gtttttaatg gaaatcttca
     9901 aaaaatagat tctcaccaaa aaaatacaaa taaccaaaaa aacaaccata aatccctcct
     9961 gtattttaac agattttatc aaacacattc attatacaag gttagactgt cgccattcta
    10021 ttcctctcct gtttttttcc tattttccat ttttccattt gagactacaa taaaagagac
    10081 ctgttttcaa aaatggatga aatcatgtct cttttatagt cttttagttt acttttagta
    10141 ctaggcaacg agctgcagac agcttgtaca gtcgagtgac tgtgcaaggt tggagatagc
    10201 acttgcggag caagtcaccc ctgcagagta cagcaaagcg agttcaaaca atccagtgga
    10261 gtgtttgaag ttggaaataa ggaaacggag tttcctctta cgtcgaagta ataaaagaaa
    10321 aactaaatat tgtctatatt ttacctatat caattcatta ctattcgctg tactttgtga
    10381 ttgcaaatga atcataaaac gcatagtttg tgtatcagaa gcataaaaag tgtacggaaa
    10441 gccgtgtttt tctaatattt tctgtataat aaacaaacca atccctatgc caccatcttt
    10501 cttatcacga ctgtagtctg gacgatagaa tggacgaaag acttgatcca attcctcgtc
    10561 acttaaaaca cgttcaacct gattttcgat tattaattga ttttggcgta gtactacacg
    10621 aataatagcc tctttacatg agtaccgaaa ggcattatct aaaatattct taatagcttt
    10681 taagaaataa acaggatttg cctcaatgag aaccggtgat agttctactt caaattgata
    10741 gcccttaacc tctgccaaac tctgataact tgttaaagag gaatcaatca actgatctaa
    10801 tcggatttgt tctctgcttt cctttaaagc catatcaaga tttgtcgctt ctaaaataga
    10861 atgaactaac tcagattgtt cctgcaagat ttccttgcat ttttttaaat atgtatcatg
    10921 gtccttaaat ggccccacat tataaatcat gccttcgact aaccccaaca tactagctat
    10981 tggagttttt aattcgtgtg atgtgatacg gaggaaatca gacttctcct tctcacgtgc
    11041 catagcacgt tcattttccg ttcttaattc atcgatactt gacaataact tgctatacag
    11101 gctgttaata tcctgagcca atattgttat ttcatcagtt cctgcaacag cacaactgat
    11161 tccagactct aacgattgca ttcgtcttgt tgtttctgaa attcttgcta ttctacgagt
    11221 ggacagtcta ctgtaaacaa aagctaccga aactgccaga acaataatca acagcaatat
    11281 gaatggataa aaagttacca atgtttgact gacatcagat aacgagtgaa atccataatt
    11341 aaataacaga taatatgtaa ctccttctgc agatgttatc tcggctcccc aagaaccaat
    11401 ttcatcaaaa tccccatttt ctaaatactc gttctcatgc tttttagcca tttcatcatt
    11461 ggggtctgga taaataattt ttctatcact cgaaaaaaga ctaataataa tattcggagt
    11521 ttttatgtcg aaatcatcaa tctcagatat aatcttagct tctggcatcc catccaattg
    11581 tttagccaca gtcatataat cgtgtctcaa ttcctgtttc ttaacctgat tataatatat
    11641 aggcatagca taatacaata accctaacaa tgttacagag atgaaagaaa tcatcgcagc
    11701 aacaataata aaattttttc tggcaatccc catattaagt accctctatt tgataaccac
    11761 gaccaactat tgtcttcaaa ggaagtgacg gcaatttctt acggatattc ttgatatgat
    11821 tatctaagac acgactatcc aattccgtat atccccatat tcccatcatc aagttatcac
    11881 gactaacaat tttcccacgt cgtttagcta aatatagtaa aacttcatat tcttttttcg
    11941 tcaattgaac ttcttcttct tccatataaa ctgccccgct agttggttga ataagaattg
    12001 ttcctatctc aatgctatct gtctctcctt ttcctctcaa aatattctca atccgtttta
    12061 ccaatatagt tggtgaaaat ggtttaacaa cataatcact tataatctga ttaaaactaa
    12121 taagctgtgt atattcgtca cccatggctg tcagcatcaa aattggaatc tgagaagttt
    12181 tgcgaatttc cttcagtact tccaaacctg tcatagatgg aatcatgata tctaaaacaa
    12241 ttaaatcgaa ttgttcttct tgaaaccttt ctaaagcaac ctttccatca aaaacagatt
    12301 ctacctgata accatgttct tttaaaaact cacaaacaac ttgactaata actatgtcat
    12361 cctctacaac caaaatcctt gacattttta tacctcctcg taaagttcta ttataaaata
    12421 ttattatact tcaattatat accgattcgt acaatggtgc aactctatca tagataaata
    12481 gagcaccatg ttctgctatt tcagctttct tttgacttct tttgtttaaa acagataaaa
    12541 aacagacgaa accgagagca tatgtagatt tgtttgataa actgaactaa acaaaaatga
    12601 aaggaactat cccattatgt ggagtccaaa aaaattaacc gtattaaaat ggtttgatat
    12661 tctcattcta acaattattt tatttggaga tggaatcatc aactctactc tccaatacat
    12721 agccttacaa aatcaaacta caactcttca agaaaatttg acattttcaa caatggataa
    12781 ttataaggct ttggctctac agttagtttg gctcacaata gccatcttct atctattact
    12841 ccgaaatttt gatttctcaa tttggaaaaa acatattttt attactcctt gggttccatt
    12901 acaagctgtt gccttattca ttttttctgc attatgcttg gatatctata atctagtatc
    12961 ctatcagttt ctagcttcca acactccatc catgtttcaa ctatttccta acattgattt
    13021 accactgatc ttgtactcat tgttgaacgg attttatgaa gaaattttct tccttaactt
    13081 gtgcttactg gttaacccta aatatgcaaa atgggcattt ttatattcgt taattattcg
    13141 atgtagtttc catacctatc aaggtttaat tagtgcactc ggtttaggct taattctagg
    13201 aactattttc tatctacttt atcaaaaaat aaaacctaaa aatttattac catttttcct
    13261 agcacatgct gcagctgata ttatcggttt aactgttcta tcatatattc tatactagtt
    13321 atctaacaga taatttgaac acaagctatc ctcatatcac caaagactga gtggacccct
    13381 actagtcatg accacccgtg aaaacgggtg gtttattttg tgtaatttag agaaaagagt
    13441 gccaa
//
LOCUS       DASFQD010000063        13136 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.063, whole genome shotgun sequence.
ACCESSION   DASFQD010000063 DASFQD010000000
VERSION     DASFQD010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 13136)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13136)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13136
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.063"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            60..941
                     /locus_tag="U1021_001396"
     CDS             60..941
                     /locus_tag="U1021_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711932.1"
                     /translation="MTLYILANPNAGSHTAEHIIFKIKESYPQLAVNIFMTVGPEDEK
                     RQIEAILKEFVSSEDQLMILGGDGTLSKALRFWPASLPFAYYPTGSGNDFAKAMNITS
                     LYRSVDAILEGKTSRIYVLNSSYGTVVNSMDFGFAAQVINGSTNSILKKILNKVKLGK
                     LTYLFFGIKTLFSKQAINLELTLDEKSYQLDNLFFISVANSLYFGGGIMIWPTASAKK
                     KEVDIVYFKNGNFYQRLQSLLALLTKRHESSHTIQHLTGVDVVLKSKEKLLLQIDGET
                     CTANEVTLTYQERSMYI"
     gene            951..1154
                     /locus_tag="U1021_001397"
     CDS             951..1154
                     /locus_tag="U1021_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF951 family protein"
                     /protein_id="HEM4711933.1"
                     /translation="MYQLGSFVEMKKPHACVIKSTGKKANKWEVIRLGADIKIRCSNC
                     DHVVMMSRHDFERKMKQVLPSEA"
     gene            1258..1617
                     /locus_tag="U1021_001398"
     CDS             1258..1617
                     /locus_tag="U1021_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4711934.1"
                     /translation="MKQLAQQIKNLRTTKNLSQDELSEKLYISRQAVSKWENGEATPD
                     IDKLVQLAEIFGVSLDYLVLGKEPEKEIVVEQRGKMNVWEYLNEESKRPLTRGDVVLL
                     IFLAVMLLGGLFIQHYF"
     gene            1701..2816
                     /gene="ychF"
                     /locus_tag="U1021_001399"
     CDS             1701..2816
                     /gene="ychF"
                     /locus_tag="U1021_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002269933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEM4711935.1"
                     /translation="MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMV
                     EVPDERLQKLTELITPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVH
                     VVRAFDDENVMREQGREDAFVDPIADIDTINLELILADLESINKRYARVEKMARTQKD
                     KDSVAEFAVLEKIKPVLEDGKSARTVDFTDEEQKIVKQLFLLTTKPVLYVANVDEDKV
                     ADPDSINYVQQIRDFAATENAEVVVISARAEEEISELDDEDKGEFLEALGLTESGVDK
                     LTRAAYHLLGLGTYFTAGEKEVRAWTFKRSMKAPQCAGIIHSDFEKGFIRAVTMSYDD
                     LIQYGSEKAVKEAGRLREEGKEYVVQDGDIMEFRFNV"
     gene            2974..3543
                     /locus_tag="U1021_001400"
     CDS             2974..3543
                     /locus_tag="U1021_001400"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000163933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEM4711936.1"
                     /translation="MTRLIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVIFSHDKIF
                     QADIATTFIDGEKVFLVKPTTFMNESGKAVHALMTYYGLDETDILVAYDDLDMAVGKI
                     RFRQKGSAGGHNGIKSIVKHIGTQEFDRIKIGIGRPKGKMSVVNHVLSGFDTEDRIEI
                     DLALDKLDKAVNFYLEEDDFDTIMRKFNG"
     gene            3543..7037
                     /gene="mfd"
                     /locus_tag="U1021_001401"
     CDS             3543..7037
                     /gene="mfd"
                     /locus_tag="U1021_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEM4711937.1"
                     /translation="MNILDLLHKNKQINQWQSGLNKLTRQLLLGLTGTSKSLVMATAY
                     DCLAEKIMIVTATQNDAEKLVADLTAIVGSENVYNFFTDDSPIAEFVFASKERAQSRI
                     DSLNFLTDSTSSGILVASMAACRVLLPSPETYKGSKIQLEVGQEIEVDNLVKNLVNTG
                     YKKVSRVLTQGEFSQRGDILDVFDMQADVPYRLEFFGDEIDGIRIFDVDSQKSLENLD
                     SITIAPASDILLTATDYERACSSIETAIEQSHIEEQQSYLREVLADMQTEYRHPDLRK
                     FLSFLYEQSWTLLDYLPKGTPLFLDDFHKIADKQAQFEKESAELLTDDLQKGKSVSSL
                     NYFASTYAELRKYKPATFFSSFQKGLGNVKFDALYQFTQPPMQEFFHQIPLLKDELTR
                     YAKSNNTVVIQASSDVSLQTLQKTLQEYDIHLPVHAADKLVEGQQQVIIGQLASGFHL
                     MDEKLVLITEKEIFNKKIKRKVRRTNISNAERIKDYSELAVGDYVVHHVHGIGQYLGI
                     ETIEISGIHRDYLTVQYQNSDRISIPVEQIDLLSKYLTSDGKAPKVNKLNDGRFQRTK
                     QKVQKQVEDIADDLIKLYAERSQLKGFAFSPDDENQIEFDNYFTHVETDDQLRSIDEI
                     KKDMEKDSPMDRLLVGDVGFGKTEVAMRAAFKAVNDGKQVAILVPTTVLAQQHYANFQ
                     ERFAEFPVNVDVMSRFKTKKEQEKTLEKLKKGQVDIVIGTHRLLSKDVVFADLGLLSI
                     DEEQRFGVKHKERLKELKKKIDVLTLTATPIPRTLQMSMLGIRDLSVIETPPTNRYPV
                     QTYVMETNPSVIRDAMLREIDRGGQVYYLYNKVDTIEQKVSELKELVPEATIGYVHGQ
                     MSEIQLENTLYAFVEGEYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGR
                     VGRSSRIAYAYLMYRPDKSLTEVAEKRLEAIKGFTELGSGFKIAMQDLSIRGAGNILG
                     AAQSGFIDSVGYEMYSQLLEQAILEKQGKATQRQKSNSEVNLQIDAYLPSDYIGDQRQ
                     KIEIYKRIKNIDSRVNYQELQEELIDRFGEYPDVVAYLLEIGLLKSFLDQVFCHTVLR
                     RQHQVTVTFEPMAGQIFLTQDYFEALSVTNLKAQITENKGKLAVVFNIQQKKEYEILE
                     ELISFAEKLKEIKARKAE"
     gene            7087..7359
                     /locus_tag="U1021_001402"
     CDS             7087..7359
                     /locus_tag="U1021_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEM4711938.1"
                     /translation="MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVN
                     DQVEIQFGNKLLTVKVLEMKDSTKKEDALKMYEIISEKRIEKDEEI"
     gene            7346..7714
                     /locus_tag="U1021_001403"
     CDS             7346..7714
                     /locus_tag="U1021_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEM4711939.1"
                     /translation="MKKSKILQLNNAFIQSERKKTQYQLAERQQKNRFMGAILILVIF
                     LFMLPAYNLVGTYTNIQQQEKKLAELEKNYEELTKEQKQEAEMVAKLKNEEYAAKYVR
                     AKYQYSKEGEFVYNIPGLPK"
     gene            7837..9117
                     /locus_tag="U1021_001404"
     CDS             7837..9117
                     /locus_tag="U1021_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEM4711940.1"
                     /translation="MQKKLLVWLLPVLFGWQVVDSTEIPFALTAQEEYELTHTIYDQY
                     FQTIPQNPNVFQTENLYSDEELTIAGGQLQPNQRFSITDVLVNSKKELVFQIDDKGYI
                     LASRHLLFDDVIVTETTVEQTYWTKKGFTLLTSPIANEATEIKNDLQPYQAVMVSKIV
                     TTSLGDFAYVTDKGWIAVNNLSKTDNRVEAVQELLTNKYPKDTIGIYVKQLSTGQTAG
                     VNQEKLFYSASIAKLPILYYVQEQLNAGYIDLTTKVKYTAESISFPGAYVAGGSGSLS
                     KTPDNKDYSVEELINKTAKESDNVASNLLSYYVANKFDSNFYQVITAKTGSEWSMVTR
                     ETSAEIAGKMMEALYIQNGYVLESLLSTQFDNQRISKDISVPVAHKIGDADDVKHDVA
                     IVYAESPFVLSIFTDKSNYDEITQIANDIYGILK"
     gene            9118..10386
                     /gene="tilS"
                     /locus_tag="U1021_001405"
     CDS             9118..10386
                     /gene="tilS"
                     /locus_tag="U1021_001405"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEM4711941.1"
                     /translation="MKDRFLKVTLDGHFFDKHKKVLVAVSGGLDSMNLFHLLYECKQV
                     LGIELGIAHINHGQREESVIEEKYLRQLAEESNVPFYLSYFEGVFSEEAARKWRYGFF
                     ATIMEKEGYTALVTAHHADDQAETVFMRLIRGGRLRHLSAIQPTQPFATGELIRPLLS
                     FKKADFEKLFHFEDCSNADFKYFRNRVRNDYLPKLKQENPKIELTLNNLAVDTNNLFQ
                     ALRDLTQDLSVTDVMSFQQQTPAVQSYLLEEYFEKFPDLQLSRPQFNEVLHILRSKAN
                     YYHLLKNDYMLEKDYHRFQIYKIGPETDSQPEKIMIKSEGIFSYGSYIFSLNHPLEEA
                     DSILYFPTENPIVVRRRQAGDTILINGVNKKLRRWFIDNKISQKVRQNALIIEQNGEI
                     YGITNLVSSDLSKSVKNDIIKATLYIKMKE"
     gene            10394..10936
                     /gene="hpt"
                     /locus_tag="U1021_001406"
     CDS             10394..10936
                     /gene="hpt"
                     /locus_tag="U1021_001406"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HEM4711942.1"
                     /translation="MLDKDIKKILVSEEEIVAKCKELGQILATDYADKNPILVGILKG
                     SIPFMAELMKHIDAHVETDYMVVSSYHGGTESSGTVKIIKDLDNSVAGRHIIFVEDII
                     DTGRTLKELKELFALRQAESIKIATLLDKPEGRVVEIEPDYTCFTIPNEFVVGFGLDY
                     DENYRNLPYVGVLKEEVYTK"
     gene            10958..12931
                     /gene="ftsH"
                     /locus_tag="U1021_001407"
     CDS             10958..12931
                     /gene="ftsH"
                     /locus_tag="U1021_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEM4711943.1"
                     /translation="MNNQPNKGFIKNPFLIILVIATIVTAFQFFNAGQQVATQEISYS
                     QVVTELKNNNVSEITYQPNSSVIEITGKYKTEQEAKDELASSIKLFQVSSKVKYKNFK
                     SLILPSETNLSELQALANENGVKVTIKPESSNGLWLNIVFNLLPLIIAGVFFMMMMNQ
                     GGGGARGAMNFGRNKAKALEQSNIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLG
                     ARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFED
                     AKKAAPAIIFIDEIDAVGRQRGVGMGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAAT
                     NRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAADVDLKLVAQQTPG
                     FVGADLENVLNEAALVAARRNKTVIDASDIDEAEDRVIAGPSKKDRQVSAKEREIVAY
                     HEAGHTIVGLVLSNAREVHKVTIVPRGRAGGYMIALPKEDQMLLSKEDMKEQLAGLMG
                     GRVAEEIIFNTQTTGASNDFEQATQMARAMVAEYGMSEKMGPMQYEGSHAMFAGQTTQ
                     KHISEQTAYELDNEVRDLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSVQIKSL
                     YETGKMPENIEHDDEDVHPLSYEEVKEKINTKE"
BASE COUNT         4405 a         2212 c         2709 g         3810 t
ORIGIN      
        1 tatgttatac taaaaaatag cacctagctt atttttatat atttagtgat ggggaataaa
       61 tgacgttata tatattagct aatcctaatg ctggtagcca tactgctgaa catatcatat
      121 tcaaaataaa agaaagttat ccacagcttg cagttaacat ttttatgaca gttggtcctg
      181 aggatgaaaa aaggcaaata gaggctattt taaaggagtt tgtcagtagt gaggaccaat
      241 taatgatttt aggtggagac ggcacactat ctaaagcttt gcgtttttgg ccagctagtc
      301 taccgtttgc ttattatcca acaggatctg gaaatgattt tgctaaggca atgaatataa
      361 catcgctcta tagaagtgta gatgccattt tagagggaaa aacaagtcgg atatatgttt
      421 taaacagttc atacggaacg gttgtaaaca gtatggattt tggctttgca gctcaagtta
      481 tcaatggttc aacgaattca attttgaaaa aaattctgaa caaggtaaaa cttgggaagt
      541 taacttatct attctttggt attaaaacat tattttcaaa acaagctata aacttagaat
      601 taactcttga tgaaaaatct tatcagttag ataatctctt ttttatttct gtagcaaata
      661 gtctttattt tggtggagga atcatgatat ggccaacagc aagtgctaaa aagaaggaag
      721 tagatattgt ttacttcaaa aatggaaatt tctaccaacg tctacaatca ttgttagcct
      781 tattaacgaa gaggcatgaa tcttctcata caattcagca tttaacaggg gtagatgtag
      841 ttttaaaatc aaaagaaaaa ttgttattgc aaatagatgg agagacatgc actgcaaatg
      901 aggtaacgtt aacctatcag gaaagaagta tgtatattta aggaggaagt atgtatcaat
      961 taggatcatt tgtcgaaatg aaaaagcccc atgcctgtgt catcaaatcg accggcaaga
     1021 aggccaataa atgggaagtc atccgtctag gagcggatat taaaatccgc tgcagtaact
     1081 gtgaccatgt tgttatgatg agccggcatg attttgaacg aaaaatgaaa caagttctgc
     1141 cgagcgaagc ctagttgaca gtttgcaact gctggttgcg agtttttcct aaaaattgct
     1201 agtcaactgc tcctttctaa gctataatag acttagaaaa aagaggagga caagaccatg
     1261 aagcagttag cacagcaaat caagaatcta cgcacaacca agaacctatc tcaagatgag
     1321 ttgtcagaga aactctatat ttcccgtcag gctgtttcca agtgggaaaa tggcgaagca
     1381 acgccagata ttgacaaact ggtccagcta gcagaaatct ttggtgttag tctggattat
     1441 ctggttttag gaaaagagcc tgagaaggaa attgtggtgg aacaacgagg aaaaatgaat
     1501 gtttgggaat acttgaacga agaatccaaa cgacctctta caagaggaga tgttgtcctt
     1561 ctcatttttc ttgcagttat gcttttaggt ggattattta ttcagcatta tttttaacga
     1621 agcttgccaa acagcaagct ttttctctac ttttctgcta taatagtcat gattgaattt
     1681 ttaattggag agtaaaaaaa atggctttaa cagcaggaat cgtcggtttg ccaaacgttg
     1741 gtaaatcaac cctatttaac gcaattacca aggcaggagc agaggcagcc aactaccctt
     1801 tcgcaactat tgatccaaac gttggtatgg tggaagtgcc cgatgagcgt ttgcagaagt
     1861 tgacagaact catcactcct aaaaagacag ttccaaccac ttttgaattt accgatattg
     1921 ccggtatcgt aaaaggtgct tctaaaggtg aaggacttgg aaataaattc ttggccaata
     1981 tccgcgaagt ggatgctatt gtccacgtgg tgcgtgcctt tgacgatgaa aatgtcatgc
     2041 gtgaacaagg tcgtgaagac gcttttgtgg atccaatcgc agatattgat actattaacc
     2101 tagaattgat tttggcggac ctagagagca tcaacaagcg ttatgcgcgt gtagaaaaaa
     2161 tggcacgtac gcaaaaagac aaggattctg tagcagaatt tgcagtcctt gaaaaaatca
     2221 aacctgtctt ggaagacgga aaatctgccc gtacggttga cttcacagat gaagaacaaa
     2281 aaatcgttaa gcaactcttc cttttgacga ccaagccagt cctctatgtt gccaatgtcg
     2341 atgaagataa ggtagcagat cctgattcta tcaactatgt gcagcaaatc cgtgattttg
     2401 cggcaacaga aaatgcagaa gtggtggtga tctctgcgcg tgcagaagag gaaatttcag
     2461 aactcgacga tgaagacaag ggcgagtttt tagaagcact cggattaaca gaatctggtg
     2521 tggacaaatt aacacgtgca gcctaccatt tacttggact agggacctac tttacagcag
     2581 gggaaaaaga ggtgcgtgct tggaccttta agcgtagcat gaaagctcct caatgtgctg
     2641 ggatcatcca ctcagacttc gagaaaggct ttatccgtgc cgtaaccatg tcctatgatg
     2701 atttgattca atacggctct gagaaggctg ttaaagaagc aggacgcctt cgtgaagaag
     2761 gaaaagagta tgtggttcaa gatggggaca tcatggagtt ccgctttaac gtttgatggc
     2821 taaactgtcc ttattcttcg ttgttttacc ttgccatacc atcagtattg tctgcggttt
     2881 caacgcctag actaagaaca gtttatcgca tcaaagagga tgattacttg gttggaaagc
     2941 attttccagc cttttggtat ttaaggagaa aaaatgacac gattgatcat cggtctggga
     3001 aatcccggag accgttattt tgaaacaaaa cacaacgttg gctttatgtt gctggataag
     3061 attgccaagc gtgaaaatgt aatttttagt cacgataaaa tttttcaggc ggatattgca
     3121 accaccttta ttgacggtga aaaagtcttc ctagttaaac caaccacctt tatgaatgag
     3181 tcaggtaagg ctgttcatgc cctgatgacc tactatggtt tggatgagac agatattctg
     3241 gtagcttacg acgacttgga catggctgtt gggaagatcc gtttccgtca aaaaggctcc
     3301 gcaggtggcc acaatgggat taaatctatt gtcaagcata ttggaacaca agaatttgac
     3361 cgcattaaaa tcggcatcgg ccgtccaaaa ggaaaaatga gtgttgtcaa ccacgtctta
     3421 tcaggatttg acacagaaga ccgtattgaa atcgacttag cactagataa acttgacaag
     3481 gctgtcaact tctatttgga agaagatgat tttgatacta ttatgagaaa gtttaacgga
     3541 taatgaatat actcgattta cttcacaaga acaagcaaat caatcagtgg cagtctggct
     3601 taaacaagtt aactcgccaa ctattattag gactcactgg aaccagtaag tcattagtta
     3661 tggcgactgc ctatgattgt ttggccgaaa agattatgat tgtgactgct actcaaaatg
     3721 atgctgagaa attagttgca gatttaacag ccatcgttgg aagtgagaat gtttacaact
     3781 tttttacaga tgatagtcca attgcggaat ttgtctttgc atcaaaagaa cgggctcaat
     3841 caaggattga cagtttaaat ttcttgacag attctactag ttcaggaatt ttggttgcta
     3901 gtatggctgc ttgtcgggtc ttattgccga gtcctgagac ttataaaggt tctaaaatac
     3961 agcttgaagt tggtcaagaa atagaagttg acaatcttgt aaagaatctt gtcaacacag
     4021 gctacaaaaa agtgtctcgt gtattaaccc agggagaatt tagccaacga ggtgacatcc
     4081 tagatgtttt tgatatgcaa gctgatgtcc cttatcgttt ggaatttttt ggagatgaga
     4141 ttgatggcat tcgtatcttt gatgtcgaca gtcaaaagtc tttagaaaat ttggatagca
     4201 tcaccattgc tccagcatcg gatattcttt tgacagctac tgactatgaa cgggcctgca
     4261 gtagtattga aacagctatt gaacaatcac atatagaaga acagcagtct tatttacggg
     4321 aagttttggc ggatatgcaa acagaatatc gtcatcccga tttacgaaaa tttctatcat
     4381 ttttatatga acaatcttgg acattgctag attatttgcc aaagggaacc cctttatttt
     4441 tagatgattt tcataaaatc gctgataagc aggctcaatt tgaaaaagaa tcagcagagt
     4501 tgttgacaga tgatttacag aagggtaaat cagtatcaag tttaaactat tttgcctcaa
     4561 cttacgctga attgagaaaa tacaaacctg ccaccttctt ttcaagtttt caaaaaggtt
     4621 taggcaatgt aaagtttgat gctctttatc aatttactca acctcctatg caggaatttt
     4681 tccaccagat tccactgtta aaagatgaat tgactcgata tgcgaaatca aacaataccg
     4741 ttgttattca agcgagttct gatgtgagtt tacagacttt acagaaaact ttacaagagt
     4801 atgatatcca tcttccagta catgcagcag ataagttagt agaaggtcag caacaagtga
     4861 tcattggaca gctagcttct ggatttcatt tgatggatga gaagttagtt cttattactg
     4921 aaaaagagat ttttaataaa aagattaagc gtaaggtccg tagaactaat atttctaatg
     4981 ctgagcgtat taaggactat agtgagctag ctgttggtga ctatgttgtt caccatgttc
     5041 atggtatcgg tcaatactta ggaattgaga ctattgaaat ttcaggcatt catcgtgatt
     5101 atttaacggt tcaatatcaa aactccgatc gcatttctat tcctgtagaa caaattgatc
     5161 ttctctccaa atacttaacg tccgatggaa aagctccaaa agttaataaa ttaaacgatg
     5221 gccggttcca acgaaccaag caaaaagttc agaagcaagt ggaggatatt gcagatgatt
     5281 tgattaagct ttatgcggag cgtagtcagc tgaaaggttt tgccttttca ccagatgatg
     5341 agaatcagat tgagtttgac aactacttta cacatgtgga aaccgacgac caacttcgtt
     5401 ccattgatga aattaagaag gacatggaaa aagactctcc aatggatcgt ctattggtag
     5461 gtgatgtcgg tttcggtaag acagaggtag ccatgcgagc tgcctttaag gctgtcaatg
     5521 atggaaaaca ggtagctatt cttgtaccta cgactgtttt agcccagcaa cactatgcta
     5581 atttccaaga acgatttgct gaatttcctg taaatgtgga tgtgatgagt cgctttaaaa
     5641 caaaaaaaga gcaggaaaaa acgcttgaaa agttaaaaaa aggtcaagtt gacatcgtca
     5701 ttggtaccca tcgccttcta tcaaaagatg ttgtttttgc tgatttaggt ttactgagta
     5761 ttgacgaaga gcaacggttt ggtgtcaagc ataaggaacg cttgaaggaa ctgaaaaaga
     5821 aaatagatgt cctaaccttg actgcaactc cgattcctcg gacattgcaa atgtccatgc
     5881 tgggaatccg tgacttatca gtaattgaga ctccaccgac aaatcgctat cctgttcaaa
     5941 cctatgtcat ggaaacaaat ccttccgtta tccgagatgc aatgcttcga gagatagatc
     6001 gcggaggtca ggtttactat ctttacaata aagttgacac cattgaacag aaagtgtctg
     6061 aattaaaaga attggttcca gaagctacta taggatacgt ccatggacaa atgtcggaga
     6121 tccaattaga aaatactctc tatgcttttg tagagggtga gtatgatatt ctagtgacca
     6181 caacaatcat tgaaacaggt gttgatattc caaatgctaa tacactgttt attgaaaatg
     6241 cagatcatat gggactgtca actctttatc aacttagagg acgtgttggc cgttccagtc
     6301 ggattgccta tgcctatctc atgtaccgtc cagacaagtc cttgacagaa gtagctgaaa
     6361 aacgcttgga agccattaag ggctttacag aactaggatc aggtttcaag attgccatgc
     6421 aagatttgtc cattcgtggt gcgggaaata ttttaggtgc tgctcagtca ggttttattg
     6481 attctgtggg atatgagatg tattcacaat tgctggaaca agccatcttg gaaaaacaag
     6541 gtaaggcaac ccaacgtcag aagagtaatt cagaggtcaa tttacagatt gatgcctatt
     6601 taccaagtga ttatattggt gatcagcgac aaaaaatcga aatttacaag cgtataaaga
     6661 atattgacag tcgtgtcaac tatcaagaat tacaggaaga attgattgac cgttttggag
     6721 agtatcctga tgtagtagcc tacttgcttg aaatcggtct attgaagtca tttttagacc
     6781 aagttttctg tcatacagtt cttagacgac aacatcaagt gacagtaaca ttcgaaccta
     6841 tggctggtca aattttccta acgcaagatt actttgaagc tttatctgtg acaaatttga
     6901 aagctcagat aacggaaaat aaaggaaaac tagctgttgt gtttaacatt caacagaaaa
     6961 aagaatatga aatattagag gaattaattt cttttgccga aaaattaaaa gaaattaaag
     7021 caaggaaggc agaataaatt tctcaaatac cttgaaaaat ggtaaaataa tgaactgagg
     7081 taaagtatga gactagataa atatttgaaa gtatcccgca ttatcaagcg tcgaacagtt
     7141 gcgaaggaag ttgccgataa aggacgaata aaagtcaatg ggattttggc gaaatcttca
     7201 acagatttaa aagtaaatga tcaggttgaa atccaatttg gtaataaact actcactgta
     7261 aaagtacttg aaatgaaaga ttcgactaaa aaagaagacg cactgaaaat gtatgaaatt
     7321 atcagtgaaa aaaggataga aaaagatgaa gaaatctaaa attctacaac tgaataatgc
     7381 ctttattcag tcggagcgta aaaaaactca gtatcaattg gcagaacgcc aacaaaaaaa
     7441 tcgttttatg ggtgcgattc tcattctagt tatctttctt tttatgttgc ctgcctataa
     7501 tcttgttggg acttacacta atattcagca gcaggaaaag aagcttgctg aattggaaaa
     7561 aaattacgaa gaactgacca aagaacagaa gcaggaagca gagatggttg caaaattgaa
     7621 aaatgaggaa tacgcagcaa agtatgttcg ggctaagtat caatactcta aagaagggga
     7681 atttgtctac aatattccag ggttaccaaa atgaccgaat ctatttttaa aattgtagag
     7741 caatttttac agcattctga tgaaaaatta gaagagttga atcaaaagaa tagagaatta
     7801 aagttagaag aaaatgaatc gtagaaagga gggagtatgc agaaaaaact gctcgtatgg
     7861 ttattgccag ttttgtttgg atggcaggtg gtcgatagta cagaaatacc atttgcactc
     7921 acagcgcaag aagaatacga attgactcat actatctatg atcagtattt tcaaactatc
     7981 cctcaaaacc caaatgtttt tcaaactgag aatctttatt cggatgaaga actgactata
     8041 gcaggtggac aattacagcc gaaccaacgt ttttctatta cggatgttct agtcaatagc
     8101 aaaaaagaat tggttttcca aatagatgac aagggttaca ttcttgcaag tagacatcta
     8161 ctatttgatg atgtaattgt tacagaaact actgttgagc aaacttattg gacaaaaaaa
     8221 ggtttcacat tgttaacctc accaattgct aacgaagcta cggaaataaa aaatgattta
     8281 caaccctatc aagctgttat ggtttctaaa atcgtaacaa cttccctagg tgattttgcc
     8341 tatgttacag ataaaggttg gattgcagta aataatcttt ctaaaacgga taatagagta
     8401 gaagctgttc aagagttgtt gactaacaaa tatcccaaag atactattgg tatatatgtg
     8461 aaacaattgt caacaggtca aactgcaggt gtaaatcaag agaaactatt ctattctgcc
     8521 agcattgcta agctaccaat tctttattac gttcaagagc aactgaatgc tgggtacatt
     8581 gatttgacta ctaaagtgaa atatacagcc gaatctatat ccttcccagg agcttatgtt
     8641 gctggaggaa gtggttcact gtcaaaaact cctgacaata aagattattc agtggaagaa
     8701 ttgatcaata agactgctaa agagtcagat aatgtagcta gtaatttact ttcttattat
     8761 gtagctaata aattcgattc caatttttat caagtaataa ctgctaaaac aggtagtgag
     8821 tggagtatgg ttacacgtga aacttcagct gagatcgcag gtaaaatgat ggaagcctta
     8881 tatattcaaa atggctatgt gctagaaagt ttgttatcta ctcaatttga taatcaacgt
     8941 atttcgaaag acatctcagt tccagttgct cataaaattg gcgatgcaga tgatgtcaaa
     9001 cacgatgtag cgattgttta cgcagagtct ccttttgttt tatctatttt tacagataaa
     9061 tcaaattatg atgagattac acaaattgca aatgatattt acgggatttt aaagtaaatg
     9121 aaagatagat ttttaaaagt gacactggat ggtcactttt ttgataaaca taagaaagta
     9181 ctagtagccg tatctggtgg gttagattct atgaacctat tccatctttt atacgaatgc
     9241 aaacaagtgc tagggattga acttggaatt gcccatatta atcatggaca gagggaagaa
     9301 tctgtcattg aggaaaaata tcttagacag ttagcagaag aaagtaatgt tcccttttat
     9361 ctgtcctatt ttgaaggtgt tttttcagaa gaagcggcgc gaaaatggcg ttatggattt
     9421 tttgctacaa tcatggagaa ggaaggctac actgcactag tgacagccca ccatgcagat
     9481 gatcaagcag aaactgtctt tatgcgattg attagaggag ggcgtttacg tcacttatca
     9541 gcaattcaac cgactcagcc ttttgcaaca ggggaactta ttcgaccact tttatctttt
     9601 aaaaaggcag attttgaaaa gctatttcat tttgaagatt gcagcaatgc agatttcaaa
     9661 tattttcgaa atagagtcag aaatgactat ttaccaaagt taaaacagga aaatcctaaa
     9721 atcgaactta ctctcaataa tcttgcagtt gatacaaata atctatttca agcgctaaga
     9781 gatttgacac aggatttatc cgttacagat gtgatgagtt ttcaacaaca gacacctgcg
     9841 gtacaaagtt atctattaga ggaatatttt gaaaaatttc ctgatttaca gctctctcgt
     9901 ccacaattta atgaagtatt acacatcttg cgttcaaaag ctaactacta tcatttattg
     9961 aaaaatgatt atatgctaga aaaggattat catcgttttc aaatttataa aataggacca
    10021 gagacggata gtcaaccaga aaaaatcatg ataaaatcag agggtatttt ttcttacggt
    10081 tcatatattt tttctctcaa tcatcctttg gaagaagcgg atagtatttt atattttcct
    10141 acagaaaatc caattgtagt gaggagaagg caggctgggg ataccatttt aataaacgga
    10201 gtaaataaaa aactccgtcg ttggtttatt gataataaaa tctcacagaa agttcgacaa
    10261 aatgcgctta ttatcgagca gaatggagaa atttatggaa ttacgaatct tgttagcagt
    10321 gatttgagta aatcagtaaa aaatgatata ataaaagcta ccttatatat aaaaatgaaa
    10381 gagtagaaca actatgttgg acaaagatat taagaaaatt cttgtttcag aagaagaaat
    10441 cgttgcaaaa tgcaaagaac tcggtcaaat tttagcaaca gactatgcag ataagaatcc
    10501 tattcttgta ggaattttaa aaggttctat cccatttatg gcagaattaa tgaaacatat
    10561 tgatgcccat gtagaaacgg attatatggt tgtttctagc taccatggcg gaacggagag
    10621 tagcggtacc gttaagatta tcaaggattt ggacaatagt gttgcaggtc gacatatcat
    10681 cttcgtagag gatattattg acactggtcg tacattaaaa gaactaaaag agctgtttgc
    10741 tctccgtcaa gctgaatcta tcaaaattgc tacactcctt gataaaccag aaggtcgagt
    10801 tgttgagatt gagccagact atacttgttt cactattcca aatgaatttg tagttggatt
    10861 tggattagac tatgatgaaa actaccgtaa tcttccttat gttggtgtac taaaagagga
    10921 agtttataca aaatagaaaa aggtttccta ctatattatg aacaatcaac caaataaagg
    10981 atttattaaa aatccttttc tcattattct cgttattgcc actattgtta cagcctttca
    11041 attttttaac gctggtcagc aagtagcaac tcaagaaatc agttattcac aagtagtaac
    11101 tgaattgaaa aataataatg tatctgaaat tacttatcaa ccaaattcaa gtgttattga
    11161 aattactggt aagtacaaaa cagaacagga agctaaagat gagttagctt catctattaa
    11221 gttattccaa gtttctagca aagttaagta taaaaacttt aagtcactaa ttttaccgtc
    11281 agaaacgaat ttgtcagagc tacaagcact tgcaaatgaa aatggagtaa aggttactat
    11341 taaacctgaa agttcaaatg gactttggtt aaatatcgtc tttaatttgt taccgctcat
    11401 cattgctggt gtattcttca tgatgatgat gaaccagggt ggtggcggag ctcgaggtgc
    11461 catgaacttt gggcgaaaca aggcaaaagc tcttgagcaa agcaatatta aggttcgttt
    11521 ctcagatgtc gcaggtgcag aagaagaaaa acaagaattg gtagaagtgg tagaattttt
    11581 gaaagatcct aaacgcttta ccaaacttgg tgcccggatt ccggcaggtg tcttgttgga
    11641 gggacctcca ggaacaggta aaactttgct tgccaaagca gtagcgggtg aagcgggtgt
    11701 accattcttc tccatttctg gttcagattt tgttgagatg tttgttggtg tcggtgccag
    11761 ccgtgttcgt tcattatttg aagatgcaaa aaaagcagca ccagccatta ttttcatcga
    11821 tgaaatcgat gctgtcggtc gccaacgtgg tgtcggcatg ggtggcggta acgacgaacg
    11881 tgaacaaacc ctcaaccaac tcttgattga aatggatggt tttgaaggta atgaaggtat
    11941 tatcgtcatt gctgcaacca accgtagtga tgttctcgat ccagcccttc ttcgtccagg
    12001 tcgttttgac cgtaaagtat tggttggtcg tccggatgtt aaaggacgtg aagcaatcct
    12061 taaagttcat gcgaagaata aaccactagc agcagatgta gatttgaaat tagtagcaca
    12121 acaaacacca ggatttgttg gtgcagattt agagaatgtt cttaacgaag cagcccttgt
    12181 agctgcacgt cgaaacaaga ctgtcattga tgcttcagat attgacgaag cagaagatcg
    12241 tgttattgca ggtccatcta agaaagaccg tcaagtttca gccaaagaac gcgaaatcgt
    12301 tgcctaccat gaagcaggtc atacaattgt tggtctcgta ctatcaaatg cacgtgaagt
    12361 tcacaaagta acaattgttc cccgcggtcg cgcaggtgga tacatgattg cccttcctaa
    12421 agaagatcaa atgcttcttt ctaaagaaga tatgaaggag caattggctg ggcttatggg
    12481 tggtcgtgta gcagaagaaa ttatctttaa tactcaaacc acaggtgcct caaatgactt
    12541 tgagcaagct acacagatgg cgcgtgctat ggttgcagaa tatggtatga gtgaaaaaat
    12601 gggaccaatg cagtatgaag gcagtcatgc aatgtttgct ggacaaacaa ctcaaaaaca
    12661 tatttctgag caaactgcat atgagttaga taatgaagta cgtgatttgt taaatgaagc
    12721 ccgcaacaaa gcggctgaaa ttattcagtc taatcgcgaa actcataaac taatcgcaga
    12781 agcattgctc aaatacgaaa ccctagacag tgttcagatt aaatctctct atgaaacagg
    12841 caaaatgcca gagaatattg aacatgatga tgaagatgtt catccccttt cttatgaaga
    12901 ggtaaaagag aaaattaata cgaaagagta gtataaaaat actctgggca agacattcca
    12961 taacggatct gtcttcactc tcaaccacta aaataactac aaagccttcg ctaagtacat
    13021 aatcttggcg agggcttttt tacaaaacag ggcatttaca agaaaaacga atcaatagtt
    13081 atttatctca atcttagaac tataccaaat aactcccttc tgaagcagaa tgcaat
//
LOCUS       DASFQD010000064        12930 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.064, whole genome shotgun sequence.
ACCESSION   DASFQD010000064 DASFQD010000000
VERSION     DASFQD010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 12930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12930
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.064"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..1516)
                     /locus_tag="U1021_001408"
     CDS             complement(<1..1516)
                     /locus_tag="U1021_001408"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711944.1"
                     /translation="MYGKNNISWSNFEAIHSNPRDMFEQLTRILFKRQFLDATSVLVS
                     SPNHPGIEANPIYSSKLDKNIAFQSKFFQAKVDYSQIQKSVEKTIEKYIKSLDTFYLY
                     CNKDLSLDSKSFKKIENSLNEHDIEIVVISNNEILATIIDYPDLQSFFFGNQTITKER
                     FREYNQLSFDSLGTRYNPKFNVVTGTDEKIQLFTKNQSAIDKINSKKSELISELDTFY
                     QIRNDDIIDNVISKIKKYVNSLNDVTATSIDECLEWNSKVNQALKSDLEELAVMKEGL
                     ETDIESEESLSIDERNGLHKKFRELDRLLDTIYFFGCSEEECALITEKILVVSGEAGM
                     GKTQLLATATKEIMDNEGYPLLLLGHHYLSNSDISSQIMEGLDFRGGLRNFLDILDIL
                     GEVENKNIYILIDAINETPNRAVWKNGLAKILSEIEKRVHIKIILSVRAGYENLVFEE
                     NMNKKLQDGRILSVIHVGFQDKSIEATREFLNFHGIPFSTSDFLNYEMTNPLYLT"
     gene            complement(1519..2826)
                     /locus_tag="U1021_001409"
     CDS             complement(1519..2826)
                     /locus_tag="U1021_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003076058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEM4711945.1"
                     /translation="MTRMKDSGIEWIGEVPEEWGITKFKYFLDTNKGLTITKENLIED
                     GIPVINYGQIHSKYGKSVSTDRDVLPQVSANYLKFKQSLLKPGDFVFADTSEDIDGSG
                     NFSTRIDDNGELFAGYHTIKAKLKNALEHDFRYFMHYFDSLAFRKQVQNKVSGIKVYS
                     ITQSILQETCLILPSLYEQNQIADFLDKKVAQLDKVKSLLEEQIKTLEDYRQSLIYET
                     VTKGLDKTVPLKDSGVDWIGQIPEGWGVGKLSQFFGEVKKKNVRNFEKNLLSLSYGRV
                     IRKSIDNLMGLLPESFDTYNIIDENDIVFRLTDLQNDKKSLRTGLSKERGIITSAYVT
                     IRTINNFINANYYNHLFYAYDLCKVYYNFGGGVRQGGTWGDLSVLRILIPSVTEQNQI
                     ADFLDKKIEQINQMIAIKKEQLENINKQRQTLIYDYVTGKRRV"
     gene            complement(2819..4924)
                     /locus_tag="U1021_001410"
     CDS             complement(2819..4924)
                     /locus_tag="U1021_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEM4711946.1"
                     /translation="MSAIKGKLPLFQANDVNISKDVNLVWSIANTLRGAYRADKYRDV
                     IIPMFVLARLEAALLPTKEKVLAQFQSNPSTPEKIFESLTGYKYYNTSKHTLKNLLNE
                     PDAIKDNFLDYLDGYSKRVKDIIENLKFKEQVDTLASTGRLFTVVKKFSELDLSPSTV
                     DSMRMGYMFEDIIRRFSENEEAGSHYTPREVIALMVNLLLMEADEELFVDNKEIKVLD
                     MAAGTGGMLATAKSYIQQLNPKVNVRLFGQEYLAETYGIGKADMLIRQEESDYFVKTD
                     TLKDSDPFHDKKMNFVIANPPFGQSWGGKDADDGVEQAVKDDQALFESTEGREGRFVN
                     TPTTGDAQLLFHLHALAKLEENGRAAIISNGSPLFSGGTTSGESQIRRYILENDLLEA
                     IVALPGQFFYNTGIGIYIWLYNKDKSPERQGKIQFIDATNEFVPLRKSLGQKRRELSQ
                     DNIKDILQWYHDFEENDRVKIFDSKEFLYKEYLVMQPLQRRGEITEKSLESVQSVQFF
                     AKLFDEYKYQELLEMEPRTAKQDKELQKLEEGRIKQEEILQALRQGLSEATYPNFETF
                     TAVLKDLLSEVKLTPANLNALALAMSEMDKTAEVIKTKKKDKLGEIADGIVYDKTTKD
                     SEIVKLSEEVETYFEREVYPHVPDAHFWWEENKLGAEIPFTRYFYQYQAPEKAEDLLK
                     QFYDLEDQLQALLEDLKHD"
     gene            complement(5089..6036)
                     /locus_tag="U1021_001411"
     CDS             complement(5089..6036)
                     /locus_tag="U1021_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase family protein"
                     /protein_id="HEM4711947.1"
                     /translation="MRQAILDKISEQIGQGVYPGASLALFSKGQWQEYYLGTQDGQLP
                     VEAGLTYDLASVSKVVGVGTLATFLVNSGALELDRTLQSYYPAFADSQVTLRQLLTHT
                     SGIDPFIPNRDSLDADQLKEAILKITVTDRKDFLYTDINFLLLGFLLEELGRDSLDQL
                     ISRDVLEPFGMSQTSFGPVSQAVPTVRGVKAGLVHDPKARVLGVHAGSAGLFSTVKDL
                     EIFLERYLTADFAADLPQDYGFDDKRKRSLAWDKKGDWLSHTGYTGTFIMYNRPLQKA
                     AIFLSNRTFDKDERAQWKLDRNQVMVLIRQVLEEEEAVD"
     gene            complement(6033..6767)
                     /locus_tag="U1021_001412"
     CDS             complement(6033..6767)
                     /locus_tag="U1021_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HEM4711948.1"
                     /translation="MLRKNEAIVPVLRINNRAINQGFLEKNLGMKTKLEDGSFADFGD
                     RTSPETKLVLTESPGNRTRAVEGLKKLNKIVIKVDNASEIEALLAQGSQYSKLYQGKN
                     GYGFEAVSPEGDTFLLHAEASVDDLKAILPPVPFKMQDDFSGLTAFTVESIWINTPQA
                     SISQDYYEAILPQQAFLHFVGAEGKDLLTPAEQVWDLEGLRFPVEQDFDWAHLESQLE
                     GPFFKDKKASFIQTVDPSSIELWFEK"
     gene            6949..9216
                     /locus_tag="U1021_001413"
     CDS             6949..9216
                     /locus_tag="U1021_001413"
                     /EC_number="3.4.14.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidyl-peptidase"
                     /protein_id="HEM4711949.1"
                     /translation="MRFNQFSFIKKETSVYLQELGALGFQLIPNASSKTNLETFVRKC
                     HFLTANTDFALSNMIADWETDLLTFFQSDRELTDLIFYQVAFQLLGFVPGVDYTDVMD
                     FVEKSNFPVIYGDTIDNLYQLLATRTKSGNTLIDQLVSDDLIPEDNHYHFFNGKSLAT
                     FSTKNLIREVVYVETPVDTAGTGQTDIVKVSILRPHFDGKIPAVITNSPYHQGVNEVA
                     SDKALHKMEGELAEKPAGTIQVSQTKINKLDLDQRELPISPATEKLGHITSYSLNDYF
                     LARGFASLHVSGVGTLSSTGYMTSGDYQQVEGYKAVIDWLNGHTKAYTDHTRSIEVKA
                     DWANGKVATTGLSYLGTMSNALATTGVDGLEVVIAEAGISSWYDYYRENGLVTSPGGY
                     PGEDLDSLTALTYSKSLQAGDFLRSKEAYEKGLAAERAALDRTSGDYNQYWHGRNYLL
                     HADKVQCEVVFTHGSQDWNVKPIHVWNMFHALPSHIKKHLFFHNGAHVYMNNWQSIDF
                     RESMNALLSQKLLGYENNYQLPTVIWQDNSGEQTWTTLDTFGGGQEAVLPLGTGSQTI
                     SNQYAQEDFDRYGKSYPAFHQDLYTGKPNQISMELPVTEDLLLNGQVTLKLRVASSVA
                     KGLLSAQLLDKGSKKRLAPIPAPKARLSLDNGRYHAQENLLELPYVDMPQRLITKGFM
                     NLQNRTDLMTVEEVVPEQWMDLTWKLQPTIYQLKKGDVLELILYTTDFECTVRDNSQW
                     QIHLDLSQSQLILQH"
     gene            complement(9496..11055)
                     /locus_tag="U1021_001414"
     CDS             complement(9496..11055)
                     /locus_tag="U1021_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK signal domain/LPXTG anchor domain surface
                     protein"
                     /protein_id="HEM4711950.1"
                     /translation="METANKKFRYSIRKFKVGVGSVLIATCLLGAGISTPTAFAMTDS
                     STATETTKTPLQHLKELVEELKMDLEELKKVPEYDSSKYSFQKYLWDDNLKYGKGQMD
                     LASTLKEEDSKIPNIEGLVDFRNHIKLERLTRQVAQYRIKYPDNEEIENEYKVHLEQR
                     DDANYASQIGSNLENYTQEAEQAFERIKEIVKKLEPKAEEPAPVPEAPTPKGDAEAPK
                     DEREVPAPVPTPDIPKEEEAPEPKAEEGVPTPAPVPETPMDEPKMEEPKSEMPAPAPK
                     EEEVPVPTPEAEAPKAEEEIPAPMPEAPAPIPEEPKTDKVESDKQMPEAKQPEMEQPK
                     AEDMPKEEMPKAEQPKAGDSAPKTAVPEVAPKTAEKPKLDFTTKERKVEEALPIKEEI
                     RYDASLALGKSYLLQEGRAGKKVSVYQDVIVDGKVVATNLLSETVVEGQNRILVKGSL
                     EMKKEEVKITPSVQSNPTLSHKGAPSANKATLPATGEQRNNLSLVGLGLAGISLAVVA
                     TAINKKSKDQI"
     gene            complement(11184..12353)
                     /locus_tag="U1021_001415"
     CDS             complement(11184..12353)
                     /locus_tag="U1021_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEM4711951.1"
                     /translation="MFRLAKEELEKLGAHITATEIYQQPGLWKEAYQLYLDQLEKIES
                     FLKSIKEKHDFVHVVFTGAGTSDFVGQSIANYLNQVNDLKHIRFSAIGTVELVSRPHD
                     YLQADVPTILVSFARSGNSPESVAAVEVAKQLVDQLYQVTITCAPEGKLALAAEGDSD
                     NLLLLQPAGSNDKGFAMTGSYSCMALTALLVFSPASQEEKAAWVEIIARLGQDVLDRE
                     DYVQDLINLDFERVIYLGSGGFYGLAHEAQLKILELTAGKIATMYESPLGFRHGPKSF
                     ITEKTLIFLFASNDAYTRQYDVDLLNEVHGDGIAERIVALSADKLADTEAANFVLAEG
                     GADLPDVFLTFPYIIFAQTVSIMAAIKCNNLPDTPSPTGTVNRVVQGVIIHPLEK"
     gene            12636..>12930
                     /locus_tag="U1021_001416"
     CDS             12636..>12930
                     /locus_tag="U1021_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008808250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEM4711952.1"
                     /translation="MMNMQNMMRQAQKLQKQMEKSQAELAAAQFTGSSVQDLVTATFT
                     GDKKLVSIDFKADVVDADDIETLQEMTVQAVNAALTKVDEATQKKLGAFAGKLP"
BASE COUNT         3544 a         2942 c         2481 g         3963 t
ORIGIN      
        1 gagttaaata aaggggattc gtcatttcat agttcagaaa gtcagatgtt gaaaatggaa
       61 tcccatggaa gtttaaaaat tctctcgttg cttcaataga cttatcttga aaaccaacat
      121 gtataacact tagaatccga ccatcttgta acttcttgtt catattttct tcaaaaacaa
      181 gattttcata acctgctcta acagatagaa tgattttaat atgtactcgt ttttcaattt
      241 cagaaagaat ttttgcaagt ccatttttcc ataccgctcg attcggagtt tcattgattg
      301 catcaattaa aatataaata tttttattct caacctctcc aagtatatct aatatatcta
      361 aaaaattacg aagtccgcct cggaaatcta gtccttccat aatttgtgaa gaaatatcac
      421 tgttggataa ataatggtga cccaataaaa gaagaggata accctcgtta tccattatct
      481 cctttgtggc tgtagcaagc agctgtgttt tccccatacc cgcttcgcca ctaacaacaa
      541 gaattttttc tgtaattagt gcacattcct cttccgaaca accaaaaaaa taaatggtat
      601 ctaacagtct atcaagttca cgaaactttt tgtgtaatcc attccgctca tctatagaaa
      661 gactttcttc tgactctata tcagtttcta aaccctcttt cataacagca agctcttcca
      721 gatctgactt caaggcttga tttactttag aattccactc cagacactcg tcaatgctag
      781 tagccgtaac atcattcaag ctattgacat acttttttat ttttgaaatt acattgtcaa
      841 taatatcatc atttcttatt tggtaaaaag tatctaattc actaattagt tccgattttt
      901 tactattaat tttatcaata gcactttgat tttttgtaaa cagttgaatt ttttcatctg
      961 ttcctgttac tacattaaac tttggattgt atctagttcc tagtgaatca aacgataatt
     1021 gattgtattc cctaaacctt tcttttgtga tagtttgatt tccaaaaaag aacgattgta
     1081 aatcaggata atcaataata gtcgcaagaa tctcattatt actaataacc acaatctcaa
     1141 tatcgtgctc atttaggcta ttttctattt ttttgaaact tttactatcc aatgataaat
     1201 ctttattgca atacagataa aaagtatcaa gtgattttat atatttttca atggtttttt
     1261 ctacagactt ttgaatttga ctataatcga ccttggcttg aaaaaatttt gattgaaaag
     1321 caatgttttt atccagttta gaactataaa taggatttgc ctcaatccct ggatgattag
     1381 gacttgaaac caaaacagag gttgcatcca aaaactgcct tttaaataaa atccgagtca
     1441 gttgctcaaa catatctctt ggattagaat gaatggcctc aaaattgctc cacgaaatat
     1501 tatttttccc atacatcctc acaccctcct ttttcctgtc acataatcat aaatcagtgt
     1561 ttggcgttgt ttgttgatat tttcgagttg ttcttttttg atagcaatca tttggttgat
     1621 ttgctctatc tttttatcta agaagtcagc gatttgattt tgttctgtaa ctgaagggat
     1681 taaaatccgt agtactgata agtctcccca cgtgcctcct tgtcgaactc ctcctccaaa
     1741 attataatat actttacata aatcatatgc atagaacaaa tggttatagt agttggcatt
     1801 aataaaattg tttatagttc ttattgttac atacgctgaa gtgataatgc cacgctcttt
     1861 tgataatcca gttcgtaaac tttttttatc attttgcaaa tctgtaagtc ggaaaacaat
     1921 atcattttca tcaataatgt tgtatgtatc aaacgattca ggtaataatc ccatcaaatt
     1981 atcgatagac ttccgtatta ctctaccata acttagtgat aataaatttt tttcaaaatt
     2041 tctgacattt ttctttttca cttccccaaa aaattgggat aattttccta ccccccaccc
     2101 ctctgggatc tgtcctatcc agtcaacacc tgagtctttt aggggaacgg ttttatccag
     2161 tccttttgtg acggtttcgt aaatgaggct ttggcggtag tcttccaagg tcttaatttg
     2221 ctcttccaga aggcttttga ccttatccag ctgagcgact tttttatcga ggaagtcagc
     2281 gatttggttt tgttcataca aacttggcag tatcaaacaa gtttcttgca atattgattg
     2341 tgtaatacta tagactttaa ttccactcac cttattttga acttgttttc taaacgccaa
     2401 agagtcaaag tagtgcataa aatatctaaa gtcatgttct aaagcatttt tgagtttggc
     2461 tttaattgta tgataaccag caaatagttc gccattatca tcaattcttg tcgaaaaatt
     2521 tcccgaacca tcaatatctt ccgacgtatc tgcaaaaaca aagtcacctg gttttagaag
     2581 cgattgcttg aattttagat aattagccga aacttgtggt aatacatccc tatccgtact
     2641 tactgacttg ccatatttcg aatgaatttg accatagtta ataactggta ttccatcttc
     2701 aattaaattc tctttggtga tggttaaacc tttattcgta tctaaaaaat acttaaactt
     2761 cgttatcccc cactcctctg gcacttcccc aatccactcg ataccactat ctttcatcct
     2821 agtcatgttt gaggtcctcc aagagtgctt gtaattggtc ttctagatca tagaattgtt
     2881 tgagcaggtc ttctgccttt tctggggctt ggtattggta gaaatagcgg gtaaagggga
     2941 tttctgctcc cagcttgttt tcctcccacc agaagtgagc atctgggaca tgagggtaga
     3001 cctctcgttc aaaataagtc tccacttctt ccgatagctt gacaatctca gaatccttag
     3061 tagtcttgtc atagacgata ccgtccgcaa tctcacccag cttgtctttc tttttcgttt
     3121 taataacctc agcagtcttg tccatctcac tcatagcaag ggctagggca ttgagattgg
     3181 ctggggtcag cttgacttct gacaaaaggt ctttcagtac ggctgtaaag gtctcaaagt
     3241 ttggataggt agcttccgac agaccttgac ggagggcttg aaggatttcc tcttgcttta
     3301 ttctaccttc ttcaagcttt tgcagttcct tatcttgctt ggctgtgcgt ggctccattt
     3361 ccagtaattc ttggtacttg tactcatcaa agagcttggc aaaaaactgg accgactgga
     3421 cactttccag acttttctcc gtgatttctc cacgacgttg tagaggctgc atgaccaggt
     3481 attctttata aagaaattcc ttgctgtcaa agattttcac acggtcattt tcctcaaagt
     3541 catggtacca ctggagaata tccttgatat tgtcctgtga cagctcacgg cgtttttgtc
     3601 ccagcgattt ccgcaaggga acaaattcat tggtcgcatc gataaattgg atcttaccct
     3661 gtctttctgg actcttatcc ttattataaa gccagatata gataccaatt ccagtattgt
     3721 agaaaaattg ccccggtaga gcgacaatag cctccaacaa atcattttct aagatatacc
     3781 gtcggatttg gctttcccca gatgtcgttc cacctgagaa taggggcgaa ccgtttgaaa
     3841 tgatagcagc tctgccattt tcctccaact tcgccaaagc atgtagatgg aagagcaact
     3901 gagcatcgcc tgtggtaggt gtgttgacga aacgaccttc cctgccttct gtcgactcaa
     3961 agagagcctg atcatccttg accgcctgct ctactccgtc atccgcatcc ttccctcccc
     4021 aagactgacc aaagggtgga ttggcaatga caaagttcat cttcttatcg tgaaatgggt
     4081 ctgaatcctt gagcgtatcc gtcttaacaa agtaatccga ctcttcctga cgaatcagca
     4141 tatccgcctt gccaataccg taggtttcag ctagatactc ctgaccaaac aagcgaacgt
     4201 tgaccttggg attgagctgt tgaatatagc ttttggcagt tgccagcata ccgcctgtac
     4261 ctgccgccat atctaagacc ttaatctctt tattgtcaac aaaaagctct tcatctgcct
     4321 ccatcaagag caggttgacc atgagagcga tgacttcccg tggtgtataa tgagaacctg
     4381 cctcctcatt ttcagaaaag cggcggataa tatcctcaaa catatagccc atccgcatag
     4441 agtcaacggt gctgggtgat aaatcaagtt ccgagaattt cttcactact gtaaagagac
     4501 gccctgtact tgccaaggta tccacctgct ccttaaattt caaattctcg ataatatcct
     4561 tgactcgttt ggaataacca tctaggtaat ccaaaaagtt atccttgata gcatcgggtt
     4621 cattcaagag attctttagt gtatgcttgc tggtattgta gtatttatag cctgtaagag
     4681 actcaaagat tttctctggt gttgacggat tcgactggaa ctgagccaac actttttcct
     4741 tggtcggtaa aagggcagct tccaagcgag ccaatacaaa catgggaata atgacatcac
     4801 ggtatttatc tgctcggtaa gcacctcgta gggtgtttgc aatagaccag actaaattga
     4861 cgtccttgct gatgttgaca tcatttgctt gaaacagagg gagtttccct tttatagctg
     4921 acataatttc tcctaacact cgtctaaaat atacctctat tatatcaaaa atcgtacact
     4981 actataggaa gcacgaagcg tttagcaaga gattttttat cgttttctta ccacttcctt
     5041 gatgggcaat aactaaaaat cctcccacaa attgcggaag gatagttatt agtcaacagc
     5101 ctcttcttcc tccaagacct gacgaatcaa gaccatgacc tggtttcgat ccagcttcca
     5161 ctgggcccgc tcatccttgt caaaagtacg attcgagaga aaaatcgcag ctttctgcaa
     5221 gggacgattg tacatgataa aggtccccgt atagcctgtg tgcgacaacc agtccccttt
     5281 cttatcccag gccaacgacc gcttgcgctt gtcatcaaag ccatagtcct ggggcaaatc
     5341 tgccgcaaag tcagccgtca gatagcgctc caaaaagatt tccagatcct tgaccgtcga
     5401 aaagagacct gcactacccg cgtgaacacc caagacacgc gccttggggt catgtaccag
     5461 acccgctttg acgccacgta ccgtcggtac cgcctgactg actggtccaa aggaggtttg
     5521 agacatgcca aagggctcta gaacgtctcg actgatcagc tggtccagac tgtctctacc
     5581 cagttcctcc aacaaaaagc ccagtaagag aaaattaatg tctgtgtaga ggaaatcttt
     5641 cctatccgtt acggtaatct tcaaaatcgc ttccttgagc tggtcggcat ccagactatc
     5701 ccgattggga atgaagggat cgataccact agtatgggtc aataattgcc gaagggtgac
     5761 ctgactatcc gcaaaagcag gataataaga ctgcaaggtc ctatcgagct ccaaagctcc
     5821 gctattaacc aaaaaagtcg caagagtccc cacaccaacc accttggaaa cagacgccaa
     5881 atcataggtc aaacccgcct caactggtag ctgaccatcc tgggtcccca aataatactc
     5941 ctgccactga cccttagaaa aaagagccag actggcacca ggatagactc cttgcccaat
     6001 ctgctctgaa atcttgtcta aaatcgcttg tctcattttt cgaaccacaa ttcaatacta
     6061 cttggatcaa ccgtttgaat aaagcttgct tttttatctt taaagaacgg accctctaac
     6121 tggctttcca aatgcgccca atcaaagtcc tgctcgacgg gaaaacgcaa gccttctaaa
     6181 tcccaaactt gttctgcagg agttaataaa tccttacctt ctgctccaac aaaatgcaaa
     6241 aaggcttgtt gaggtaggat agcctcataa tagtcttggc tgatactagc ctgtggggta
     6301 ttaatccaaa tagactctac tgtaaaagcg gtcagaccag aaaagtcatc ctgcatctta
     6361 aatggaacag gcggaaggat tgcttttagg tcatcaacag atgcttctgc atgtaaaagg
     6421 aaggtgtctc cttctggcga cacagcttca aaaccatagc cattttttcc ttggtagagc
     6481 ttactatact gtgacccttg cgccagtaaa gcttcaattt cagaggcatt gtctactttt
     6541 atcacaattt tattcaattt tttaagccct tcgacagcac gggtgcgatt accaggagat
     6601 tctgtcaaaa cgagcttcgt ttctgggctt gttctatctc caaaatcagc aaaagaacca
     6661 tcttctagct tggttttcat tcctagattt ttttctaaaa atccttgatt aatagcccta
     6721 ttattaatac gtaaaacagg gactatagct tcattttttc tcaacacgat acatttcact
     6781 cctcagtcat tctacaatat tgtataaaaa atttcgtcat tttacaacta attgtatcgt
     6841 cgttttatac attaatatct ttatatatac tgataatttt tagacaaaca ctagcttatc
     6901 agatataata gctattatag actattatcc taaaaaagag gagaatttat gcgctttaat
     6961 caattttctt ttataaaaaa agagacctcc gtctacttgc aagagcttgg tgctctagga
     7021 tttcaactga ttcctaatgc aagtagtaag acaaatttag aaacctttgt cagaaagtgc
     7081 catttcctga cagccaacac cgactttgcc ctgtccaaca tgattgcgga ttgggagaca
     7141 gatcttctga ccttcttcca gtctgaccgt gagttgacag acctgatttt ctatcaagtg
     7201 gcctttcagt tgctaggctt cgtgcctggt gtggattata cagatgtcat ggatttcgtg
     7261 gagaaaagca atttccctgt catctatgga gatacgattg acaacctcta tcaactgctg
     7321 gctactcgta ccaagtctgg aaacaccttg attgaccagc tggtcagcga cgacctgatt
     7381 ccagaggaca atcactacca cttcttcaac ggtaagtcac tagcaacctt ttcaaccaaa
     7441 aacctcattc gagaggtggt ttatgtcgaa acgcctgtcg atacggctgg gactggccag
     7501 acagatattg tcaaggtatc cattctccgt cctcactttg acggaaaaat ccctgcggtg
     7561 attaccaaca gtccttatca tcaaggagtc aatgaagttg ccagcgacaa ggccctgcac
     7621 aagatggaag gggagttagc ggaaaaacca gctggcacca ttcaagttag tcaaaccaag
     7681 attaacaaac tagacttgga ccagcgagag ctacctatca gccctgccac cgaaaaacta
     7741 ggtcacatca cttcttactc tctcaatgac tacttcctcg ctcgtggttt cgccagcctc
     7801 catgtgtctg gtgtcggtac gctgagctcg actggctaca tgacatctgg cgactaccag
     7861 caggttgagg gctacaaagc ggtgattgac tggctgaacg gtcacaccaa ggcctacaca
     7921 gaccataccc gctcgattga ggtcaaggcc gattgggcca atggtaaggt agcgacgacg
     7981 ggactgtctt atctgggtac catgtccaat gccttggcaa caactggcgt ggacggattg
     8041 gaagtcgtca tcgcagaagc agggatttcc tcttggtacg actactaccg tgaaaacggg
     8101 ctggtgacca gccctggtgg ctatccaggc gaggacttgg acagcttgac tgccctgacc
     8161 tactccaaga gtctacaagc aggcgacttc ctccgcagca aagaagccta cgaaaaaggc
     8221 ttggctgccg aacgagctgc cctggaccgc accagtggcg actacaacca gtattggcat
     8281 ggccgcaact acctgctcca cgctgataag gtccagtgcg aagtggtctt tacccacggc
     8341 tcacaggact ggaatgtcaa gccaatccat gtctggaata tgttccatgc cctacctagt
     8401 cacatcaaga agcacctctt cttccacaac ggtgcccacg tttatatgaa caactggcag
     8461 tctatcgact tccgcgagtc catgaacgcc ctgctcagcc aaaaactcct gggctacgag
     8521 aataactacc aactgccaac ggtcatctgg caggacaaca gcggcgagca aacctggacg
     8581 accttggaca cctttggcgg tggacaagag gctgtcttgc cactgggaac tggaagtcag
     8641 accatttcca atcagtatgc ccaagaagat tttgaccgct acggcaaatc ctaccctgcc
     8701 ttccaccaag acctctatac aggcaagccc aatcaaatca gcatggaact gcctgtaaca
     8761 gaggacctct tgcttaacgg acaggtcacg ctgaaactcc gtgtcgcttc aagtgtggct
     8821 aaaggcctct tatctgctca gctattggac aagggaagca aaaaacgcct tgccccaatc
     8881 cctgcgccta aagcaagatt gagtctagat aacggtcgtt accatgccca agaaaatctg
     8941 ctggagttgc cttatgtgga tatgccacaa cgcttgataa ccaagggctt tatgaacctg
     9001 cagaaccgca ccgacctgat gactgtcgag gaagtggtgc cggagcagtg gatggatttg
     9061 acctggaaac tgcagccgac tatttatcag ctgaaaaaag gtgacgtctt agagctgatt
     9121 ctctatacaa ccgactttga gtgtactgtt cgggataatt ctcaatggca aatccacctt
     9181 gatttaagtc aatcacagtt aattttacag cactaatact caatgaaaat caaaatcaga
     9241 cagactagct tcaaaggttt gggaaacctt tggaggttgg agagtgaacg aagttcgttt
     9301 ctccaagagc agatataccc ctgctacttt cttattttat ggtagcaggc tgtcaagctc
     9361 cactggagct tgacactcat caaatcaagt caacaacgtc tgattttaag tttcgaagag
     9421 tataatattg attttcagtt ctaaaaagag gctgggcgtt tccgccctgc ctctttattg
     9481 atatttcata atggtttaga tttgatcttt agattttttg tttatagctg tagcgactac
     9541 tgccaagcta attccagcta aaccaagacc tactaaggat aggttattgc gttgttcacc
     9601 tgttgcaggt agggttgctt tgtttgcaga aggtgccccc ttatgactca gtgtcggatt
     9661 tgattgtact gaaggagtta tttttacttc ttctttcttc atttccaagc taccttttac
     9721 aaggatacga ttttgacctt caacaacagt ttctgataat aggttggttg cgacaacttt
     9781 accatcaact atgacatctt gataaacaga tactttttta cctgctctcc cttcttgaag
     9841 aagatatgat ttgccaagcg ctaggcttgc atcatatctg atttcttctt tgatagggag
     9901 agcttcttct accttgcgtt cttttgttgt gaagtctagc tttggttttt ctgctgtttt
     9961 tggtgcaact tctgggactg ctgtcttagg tgcagagtct cccgcttttg gttgctcagc
    10021 ctttggcatt tcctccttcg gcatgtcttc tgctttcggt tgctccattt ctggttgctt
    10081 agcctctggc atctgtttgt cagactctac tttatcagtt tttggttctt ctgggattgg
    10141 agccggagcc tctggcattg gtgccggaat ttcttcctcg gcttttggcg cttctgcttc
    10201 cggtgttgga actggaactt cttcctcttt tggtgccggt gctggcattt ccgattttgg
    10261 ttcttccatt ttcggctcgt ccattggagt ttccggtact ggagctggag ttggaacccc
    10321 ttcctcggct tttggctctg gagcctcttc ctcttttgga atgtccggtg tcggaacggg
    10381 agctggaacc tctctctcat ctttaggtgc ttccgcgtca ccttttggtg ttggagcttc
    10441 tggtactgga gccggctctt cagcttttgg ctctagcttt ttaactatct ctttaatcct
    10501 ttcaaacgct tgttctgctt cttgagtata attttccagg ttacttccaa tctgactagc
    10561 ataattagca tcatctcttt gctccaaatg taccttatac tcgttttcaa tttcttcatt
    10621 gtcagggtat tttatacgat actgggcaac ctgacgcgtc aaacgttcca acttaatatg
    10681 gtttctaaag tcaactaaac cttcaatatt tggaattttg gaatcttcct ccttcaaagt
    10741 agaagcaaga tccatttgac cctttccata ttttaaatta tcgtcccaca agtatttttg
    10801 aaatgagtat ttagaactat catattcagg aaccttcttc aattcttcca agtccatttt
    10861 tagctcttcc acaagttctt tgaggtgttg aagaggtgtt tttgtagtct ctgtagctgt
    10921 tgaagaatct gtcatcgcaa aagcggttgg tgtcgaaatt cccgccccaa gtaaacaagt
    10981 ggcaattagc accgagccta cgccgacttt aaatttacga atactatatc tgaatttttt
    11041 atttgcagtt tccatttcta taagtcctaa tcatatttta tttatattac tattgtacca
    11101 tgatactcag gcggttagat gtgtttttta tgtgtttaaa ttctactgaa agactctgtt
    11161 tcttcatcat tgaatagatg tgactatttt tccaatggat gtataatcac accctgcacc
    11221 acacgattga cggtgcctgt tggagatggt gtatctggca agttgttgca cttaatggct
    11281 gccataatag ataccgtttg ggcaaagatg atgtaaggga aggttaggaa aacatctggc
    11341 agatctgctc cgccttctgc caagacaaag ttagctgcct ctgtatctgc tagcttgtca
    11401 gccgacaatg ccactatccg ctctgctatg ccatcaccat gaacttcatt aagcaagtcc
    11461 acatcatact gacgagtgta ggcatcgttt gaggcaaaga ggaaaatcaa ggtcttttca
    11521 gtgatgaagg attttggtcc atgacggaaa ccgagtggtg actcgtacat ggtcgcaatt
    11581 ttgcctgctg tcaattccag aattttcaac tgagcttcgt gggcaagacc atagaaacca
    11641 cctgaaccga ggtaaatcac tcgctcaaaa tcaaggttaa tcaggtcttg cacgtagtct
    11701 tcacggtcca aaacatcttg acccagacgg gcaatgatct caacccaagc agctttttct
    11761 tcttgactgg ctggcgagaa gacgaggagg gctgtcagag ccatacagct gtaagaacct
    11821 gtcatggcaa agcccttatc gtttgaacca gccggttgca agagcaagag attgtccgaa
    11881 tctccttcgg ctgccagagc caatttgccc tctggcgcac aagtaatagt aacttgataa
    11941 agctgatcaa ccaattgctt ggcaacttct actgctgcca cactttctgg tgaattgcct
    12001 gaacgggcaa aggataccaa aatcgttggc acatctgcct gtaaatagtc atgtgggcga
    12061 ctaaccagct ccactgtacc aatagcagaa aaacgaatgt gtttcaagtc attgacttgg
    12121 ttgaggtagt tggcaatgct ttgcccaaca aagtcagaag tccctgcacc tgtaaaaaca
    12181 acgtgaacaa agtcatgttt ttccttgatt gattttagaa aactctcgat tttttccaat
    12241 tggtcaagat agagttgata agcctctttc cacaagccag gctgttggta aatctcagtg
    12301 gctgtgatat gggcccccaa tttttctaat tcttcttttg ctaaacggaa catagctcct
    12361 ccttgatttc tggttataac cagtttttct tatattatag cgaatttatc cctcaaagtc
    12421 aatttaaaat agattaatat gtcaaattta ccaatttata tccgatattg ctgactataa
    12481 cttattttaa gaaggtagca ttatctacat aaaacatgtt ataatattta ctacgcctct
    12541 gcctttgaaa atttttaaca ataaggcaaa ataaggcaag gaaaaattac aaacaaggtc
    12601 taaacccttg atacgaaagg aatcttaaaa atcttatgat gaatatgcaa aacatgatgc
    12661 gccaagctca aaaacttcaa aaacaaatgg agaagagcca agctgagttg gctgctgctc
    12721 aatttaccgg tagctctgta caggacttgg ttactgctac ttttactggc gacaagaaat
    12781 tggtttctat tgacttcaag gctgacgttg tagatgcgga tgatattgaa actctgcagg
    12841 aaatgaccgt ccaagccgtc aacgctgcac ttacaaaagt cgacgaggcg actcagaaaa
    12901 aactaggtgc ctttgcaggt aaattgcctt
//
LOCUS       DASFQD010000065        12761 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.065, whole genome shotgun sequence.
ACCESSION   DASFQD010000065 DASFQD010000000
VERSION     DASFQD010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 12761)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12761)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12761
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.065"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            98..1930
                     /gene="lepA"
                     /locus_tag="U1021_001417"
     CDS             98..1930
                     /gene="lepA"
                     /locus_tag="U1021_001417"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017645216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEM4711953.1"
                     /translation="MNLEDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSRE
                     MQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLA
                     ACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPIINKIDLPAADPERVRQEIEDVI
                     GLDASEAVPTSAKAGIGIEEILEQIVEKVPAPTGDVEAPLQALIFDSVYDPYRGVILQ
                     VRIVNGVVKPGDTIQMMSNGKTFDVTEVGIFTPKAIGRDYLATGDVGYIAASIKTVAD
                     TRVGDTVTLAENPASEPLAGYKQMNPMVFAGIYPIDSNKYNDLREALEKLQLNDASLQ
                     FEPETSQALGFGFRCGFLGLLHMDVIQERIEREFNIDLIMTAPSVVYHVNMTDGEMID
                     VANPSEFPDPTKIATIEEPYVKAQIMVPQEYVGAVMELAQRKRGDFVTMDYIDDNRVN
                     VIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRSSKLVKMDILLNGDKVDALSFI
                     VHKEFAYERGKIIVDKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGG
                     DVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDEDDKK"
     gene            complement(1980..2162)
                     /locus_tag="U1021_001418"
     CDS             complement(1980..2162)
                     /locus_tag="U1021_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019320686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase"
                     /protein_id="HEM4711954.1"
                     /translation="MPFVRIDLFEGRTEEQKIALAREVTEVVSRNTNAPKEAIHVFIN
                     DMPEGTYYPQGEMKRK"
     gene            2297..3604
                     /locus_tag="U1021_001419"
     CDS             2297..3604
                     /locus_tag="U1021_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excalibur calcium-binding domain-containing
                     protein"
                     /protein_id="HEM4711955.1"
                     /translation="MFKKKATQIVSETSIKKSRKFLNRKTAGITGGILLTTFIGSQLM
                     TAELPKKDDLYGQQYVTVVKHLQEAGFKNIQGVELSDLEFGKIGESNLVELVSVDGED
                     WKEGRALKNIPITISYHVPKKDAVEFNLPASKNLADVEKELKDSGFKQVELTPVLLVE
                     EGNADKKDKIDRLQIGNHTYQSNHFYSTSLPVTLTYFDVSKDNIKLPENLAEAKTKPE
                     LEKQLKTAGFTDIKWTAVADKDKAKHEKIQKINLGGAEIQLPTKQEIISKKSTPIVIT
                     YYDFSSFAELPSSISTKTATDTKKLFTDGGFSQVSEVATETNEIAKNGQIIAVEIDGK
                     SFNEMNDTVIKKDSKVIIKYWNAEKAIAEKARKEEEERLAAEAQKVAEAQSQVQQFAA
                     TPSQNTYYPNCKAVRQAGAAPIYRGEPGYGSHLDRDGDGVGCE"
     gene            3666..3890
                     /locus_tag="U1021_001420"
     CDS             3666..3890
                     /locus_tag="U1021_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711956.1"
                     /translation="MAYKYRMILSFLLAGLCLYLVATVFAKSIWEGPLFLAFSFYSLI
                     YGCVMLYKWKPTAAKIIFQCIGEFLSLPWS"
     gene            3989..4570
                     /locus_tag="U1021_001421"
     CDS             3989..4570
                     /locus_tag="U1021_001421"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HEM4711957.1"
                     /translation="MAQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRD
                     AFGVVSSRIGMRRDAVAIDDDMDIFGFIEKMEPRPYCVLIDEAQFLRRHHVYALARVV
                     DELDVPVMAFGLKNDFRNELFEGSQHLLLLADKLDEIKTICQYCSKKATMVLRTQDGK
                     PTYEGEQIQIGGNETYIPVCRKHYFSPEIKELP"
     gene            4851..5930
                     /gene="prfA"
                     /locus_tag="U1021_001422"
     CDS             4851..5930
                     /gene="prfA"
                     /locus_tag="U1021_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001028822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEM4711958.1"
                     /translation="MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAATR
                     DTVTAYREYKTVLQNMVDAEEMIKESFGDADLEEMAKEELKQAKADKEAYEEKLKILL
                     LPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGG
                     IKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDI
                     DPKDLRVDIYHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIR
                     ARVADHFAQIAQDEQDAERKSTIGTGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTIL
                     SGKMDEVVDALVLYEQTQKLEELNK"
     gene            5930..6763
                     /gene="prmC"
                     /locus_tag="U1021_001423"
     CDS             5930..6763
                     /gene="prmC"
                     /locus_tag="U1021_001423"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEM4711959.1"
                     /translation="MNYAQLFAAYEEQLVAIGEEAESLSFTFRGLKGLNFTEFLLLLR
                     QEVTPTDKEEIDAIFQQLSQHRPAQYIIGKADFHGLEFAVDERVLIPRPETEELVDLI
                     LQENSRAGLRILDIGTGSGAIAISLAKARPDWEVVAVDISNDALAVAQENARTNQVSV
                     HFLESDVLQAVTGKFDIIVSNPPYISPDDTDEVGLNVLTSEPHLALFAEEDGMAIYRQ
                     IAEQAGAFLKEKGKLYFEIGYKQGQDLTDLLALHFPKKRIRVLKDQFGQDRKVVADDN
                     G"
     gene            6750..7358
                     /locus_tag="U1021_001424"
     CDS             6750..7358
                     /locus_tag="U1021_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HEM4711960.1"
                     /translation="MTMDKLRTILENGGAVILPTETVYGLFAQALNEDAVNRVYQLKQ
                     RPRDKAMNLNVSNLNDIYFFSQNTPFFLEKLYNRFMPGPLTIILKANENVPFWVNSGL
                     DTVGFRLPNHEQTLRLISEAGPLIGPSANISGNESGKKFSDIQAQFSVDLPGIEDDQA
                     LTGIDSTILDLSGQKARILRQGAISREEIQKAIPEIEFEVVL"
     gene            7355..7786
                     /locus_tag="U1021_001425"
     CDS             7355..7786
                     /locus_tag="U1021_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4711961.1"
                     /translation="MIRPIEKSDLIVIREINAQSLGYDCSLEQTERQFFRCTSTLGHI
                     LLVYIDDISGAVQGYIHAQVYESLYSDTGLNILGLAVLPGHQGQGIGASLLKAVEQIA
                     QKEGYHFIRLNSAESRLKAHLFYEKNGYHSDKMQKRFIKHI"
     gene            7810..9069
                     /locus_tag="U1021_001426"
     CDS             7810..9069
                     /locus_tag="U1021_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEM4711962.1"
                     /translation="MIFDKVNYKEFDKEVWEAIQAEEKRQQNNIELIASENVVSKAVM
                     AAQGSILTNKYAEGYPGRRYYGGTECVDVVESLAIERAKEIFGAKFANVQPHSGSQAN
                     CAAYMALIEPGDTVMGMDLAAGGHLTHGASVSFSGQTYNFVAYNVDEETGLLDYDAIL
                     KQAKEVQPKLIVAGASAYARTIDFAKFREIADAVGAKLMVDMAHIAGLVAAGLHPNPV
                     PHAHITTTTTHKTLRGPRGGLILTNDKELIKKINSAIFPGIQGGPLEHVIAAKAVSFK
                     EVLDPAFKDYAQKVIENSKAMAEVFLANPNFKVITGGTDNHLFLVDVTKVVENGKVAQ
                     HLLDEVNITLNKNSIPYEKLSPFKTSGIRIGSAAITARGFGVEEARKVAQLTIKALEN
                     AENETALEEVRQEVRALTDQFPLYEGL"
     gene            9069..10043
                     /locus_tag="U1021_001427"
     CDS             9069..10043
                     /locus_tag="U1021_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006153495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein"
                     /protein_id="HEM4711963.1"
                     /translation="MDIFVKKAIIHQFSPDDTELVISDQLLTVSPKIEEYLRKKIERV
                     FSDEAKTGQFNPDNPFLDYLDGDLLTNSVKIANLWKEEFSISENLKTNDLIFIEFERN
                     GVEHFAFLRISLRENLAHVGLESGSPLKITQNNLPGAGSAPDEALIVNLQTRKYHLIE
                     KRIKHNGTFLNYFSDNLLQVTPAISAKKSIKAVEQTAQKIADNFHQGDFQFQSKVKSA
                     IFNNLEEDNELSPEKLADQLFDNNLTARLNFVDQLKEVIPDKISFDEIDSSRQLKKFE
                     NQKLSLSNGIELIVPNAIYEDAESVEFIQNDNGTYSILIKNIEDIKSK"
     gene            10044..10643
                     /locus_tag="U1021_001428"
     CDS             10044..10643
                     /locus_tag="U1021_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme family protein"
                     /protein_id="HEM4711964.1"
                     /translation="MKKLIRTLILLLLIFLGYKFYQTYSAVKQVMTYQTMVQEVLAEN
                     DTPANEELVLAMIYTETKGQEADVMQSSESATGYANTITDSRESIRQGIIYLTENLRL
                     AEEKGVEVWTAVQAYNFGPAYIDYIAEHGGEHTLSLAKEYSRTVVAPSLGNTTEETYT
                     YFHPLALLNGGKLYVNGGNIYYARQVRFNMHLMRLINLF"
     gene            10744..11502
                     /locus_tag="U1021_001429"
     CDS             10744..11502
                     /locus_tag="U1021_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEM4711965.1"
                     /translation="MKRNVLITGASSGIGKAIAYVFAANGDNIIITGRRLDKLEEIKQ
                     DIEKQYHVQVSVHSFDVTNMEQTIVNCQKILEEVGQIHILVNNAGLALGLDKFQDYDL
                     TDMMTMIDTNIKGLLTVTRQLLPQMVENNEGHIINIGSTAGIYAYAGAAVYAATKSAV
                     KVLSDGIRIDTIDKNIKVTTLQPGIVETDFSQVRFHGDKERAASVYQGIDALQANDIA
                     SCTLFVANQPAHVQISDMTIMATKQATGFTIHRD"
     gene            11519..12268
                     /locus_tag="U1021_001430"
     CDS             11519..12268
                     /locus_tag="U1021_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor 1 (IF-1)"
                     /protein_id="HEM4711966.1"
                     /translation="MNRKYLALALGLLTIMSLSACQTEKKGSSASSSTADTQVPNANT
                     STSSTVQREISLSSMDIDALMQGNYDSILGTWQNSQGNSLVFNSKGLVADSQSLLGRG
                     KITDGIFETGYVDATIGDVTLLMIPKGTQANTTEIDTTDSTRDRMIVISQETTADVVD
                     VYYRLTNSATSGIDPLKNTETGVQLDSGPKTIDYANSILGENNWRVIEGNYTRTESIP
                     YNVLEGDDNARYTIYQNGVIINADYQIVYQP"
     gene            12290..12643
                     /locus_tag="U1021_001431"
                     /pseudo
     CDS             12290..12643
                     /locus_tag="U1021_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943204.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HIRAN domain-containing protein"
BASE COUNT         4074 a         2529 c         2682 g         3476 t
ORIGIN      
        1 agcagagcag acacctagtt ttctaggtgt ttttcttatg gaaaattatc actaaatctg
       61 atataatgag gagtaatacc cttgtagagg aagaaacatg aatttagaag atttgaaaaa
      121 acgacaggag aaaattcgta atttctccat tattgcccac atcgaccatg gtaaatcaac
      181 cttggctgac cgtattcttg agaagacaga aacagtttcc agccgtgaaa tgcaagccca
      241 gttgctagat agtatggact tggaacgcga gcgtggtatc acaattaaac tcaacgcaat
      301 cgaactcaac tatacagcta aagatggtga gacatacatt ttccacttga ttgacacacc
      361 aggacacgtg gattttacct atgaggtatc gcgttctctt gcggcctgtg aaggggcgat
      421 tctggtggtg gatgctgctc aagggattga agcacagacc ttggctaacg tttatctagc
      481 cttggacaat gatttggaaa tcttgccaat cattaacaaa attgacctac cagcagcaga
      541 cccagaacgt gttcgtcagg aaatcgaaga tgtgattggt ttggatgctt ctgaagcagt
      601 gccaacatca gccaaggcag gtattggtat cgaggaaatc ttggagcaga tcgtggagaa
      661 ggttccagca ccgactggtg atgtcgaagc tccattgcaa gccttgattt ttgactcggt
      721 ttacgatccg tatcgaggcg ttatcctgca agttcgtatt gtcaacggtg tggtaaaacc
      781 tggcgatact attcagatga tgagcaatgg caagaccttt gatgtgacgg aagtgggtat
      841 cttcacacca aaagcaatcg gtcgtgatta cttggcgact ggtgatgtag gttacattgc
      901 agcctccatc aagacagttg cagatacccg tgtcggtgat acagtgacct tggcagaaaa
      961 tcctgccagc gagccactag cgggctacaa gcagatgaac ccaatggtct ttgccggtat
     1021 ctatccgatt gattccaaca agtacaatga cctccgggaa gccttggaaa aactccagct
     1081 aaacgatgcc agcttgcagt ttgaaccaga aacatcgcaa gcactcggat ttggtttccg
     1141 ttgtggattc ttgggcctct tgcacatgga tgttatccaa gaacggattg agcgtgagtt
     1201 taacattgac ctcatcatga cagcaccgtc ggtggtttac catgtcaaca tgacggacgg
     1261 tgaaatgatt gatgtagcca acccatccga attcccagac ccaaccaaga tcgccactat
     1321 cgaagagcct tacgttaagg cacaaatcat ggtaccacag gaatacgtcg gtgcagtcat
     1381 ggaattggcc caacgcaaac gcggtgactt tgtgactatg gattacatcg atgataatcg
     1441 tgtcaatgtc atctaccaaa ttccacttgc ggagattgtt tttgacttct ttgataagct
     1501 taagtcatcc actcgtggtt atgccagctt cgactatgag atttctgaat accgttcatc
     1561 caagttggtg aaaatggata ttctcctcaa tggcgataag gtcgatgctc tcagctttat
     1621 cgtccacaag gaatttgcct atgaacgtgg gaaaattatc gtggacaaac tcaagaaaat
     1681 cattccgcgt caacagtttg aagtgccaat ccaagctgct atcggtcaga aaatcgtggc
     1741 ccgtagcgac atcaaggccc ttcgcaaaaa cgttttggcc aagtgttatg gtggtgacgt
     1801 ttcccgtaaa cgcaaactcc tagaaaagca aaaagctggt aaaaaacgga tgaaggccat
     1861 cggatctgtc gaagtcccac aagaagcttt cctcagtgtt ctcagcatgg atgaagacga
     1921 taagaaataa acttgacaca aagaaacact cctgcatttt gttgcaagag tgttttctct
     1981 tattttcgtt tcatttcacc ttgtgggtag taggtccctt caggcatatc attgatgaag
     2041 acatgaatgg cttctttggg cgcattagta ttacgagata caacttcggt aacttcacgt
     2101 gctaaggcaa tcttttgttc ttctgtgcgt ccttcaaaca aatcaatacg tacaaatggc
     2161 atatatttcc tcctttattt ttcgtttatt gtaccatagt ttttatgatt ctccaaggat
     2221 attttcataa gatattgcaa aatatattta tattttgtta taataatatc acaataaaca
     2281 ataaggagaa tgatttatgt ttaagaaaaa agcaactcag atagttagcg aaacgtcaat
     2341 taaaaaatct agaaagtttc ttaatcggaa aacagcagga ataactggtg gcatcctact
     2401 tacaacattt atcggttcac aattaatgac tgctgagctt ccaaaaaaag atgaccttta
     2461 tggacaacag tatgtaacag tcgtaaaaca tcttcaggaa gcaggtttta aaaatattca
     2521 gggggtggaa cttagtgatt tagaatttgg aaaaataggt gaaagcaatc ttgtcgaact
     2581 cgtctctgtt gacggagaag attggaagga aggacgtgct ttaaaaaaca tcccaattac
     2641 aatctcctac catgttccca aaaaagatgc cgttgaattc aacctaccag cttctaaaaa
     2701 tttagcagat gtcgaaaaag agctgaaaga ttcaggtttt aagcaagtcg aactaactcc
     2761 tgttctgcta gtagaagaag gcaatgcgga caaaaaagat aaaattgatc gccttcaaat
     2821 cggaaatcac acctatcaat ccaatcattt ttactctact agtctccctg ttacattaac
     2881 ctattttgac gttagcaaag ataacatcaa actaccagaa aatctagcag aggctaaaac
     2941 aaaaccagag ctcgaaaaac aactaaaaac agcaggattt acagacatca agtggactgc
     3001 tgttgcagac aaggataaag caaagcacga aaaaattcaa aaaattaatc taggtggtgc
     3061 agagattcaa ttgcccacca aacaggagat tatcagcaaa aaatcaaccc caattgtgat
     3121 tacctactac gatttctcta gcttcgctga actgccatca tccatttcaa cgaaaacagc
     3181 tacagatact aaaaaattgt ttaccgatgg tggtttttct caagtatctg aagtagcaac
     3241 agagaccaat gaaattgcta aaaacggaca aatcattgcg gtcgagattg atggaaaatc
     3301 ttttaacgag atgaacgata cggtcatcaa aaaagatagc aaagtcatta tcaaatattg
     3361 gaatgctgaa aaagctattg ctgagaaagc acgtaaagag gaggaagaac gcctcgctgc
     3421 cgaagcgcaa aaagtagcag aagcacaaag tcaagttcag caatttgctg ctacaccatc
     3481 tcaaaacaca tattatccaa attgtaaggc agttagacaa gcaggagctg caccaatcta
     3541 tcgtggagaa ccaggttacg gtagtcattt agaccgtgat ggagatggag ttggatgcga
     3601 gtaagaaaaa acattgacaa cgtttacatt gcatgctata ctgctcttat aaggagggat
     3661 tactcatggc ctataaatac cgtatgattt tatcgttcct actcgctgga ttatgtttgt
     3721 atctagtagc aactgttttt gccaagagta tctgggaagg accgttgttt cttgcatttt
     3781 ctttttacag cctgatatat ggttgtgtta tgctctacaa gtggaaacca acggcagcta
     3841 aaatcatttt ccaatgtatt ggagaatttc tctctttacc atggtcttaa tatcaaacaa
     3901 gctcaaaacg ggcttgtttt tctatttcct aaatggtcaa tttatgatag aatggaagga
     3961 gtgaaaattt aagattggaa agagaaaagt ggctcaatta tattataaat atgggacaat
     4021 gaactcagga aaaaccattg agattttgaa ggttgcccac aactatgaag aacaaggaaa
     4081 acctgttgtt atcatgacat ctgcacttga tactcgtgat gcctttggtg ttgtatccag
     4141 tcgtattggc atgagaagag atgcagtggc gattgacgat gatatggata tctttggttt
     4201 tattgaaaaa atggaaccgc gtccttactg tgttctcatt gatgaagcac aatttcttcg
     4261 acgtcatcat gtctacgcac ttgctcgcgt agtcgatgaa ttagatgtac ccgttatggc
     4321 tttcggtctt aaaaatgatt tccgaaatga actatttgaa ggttcccaac atttgctctt
     4381 attggctgat aaattagatg aaatcaaaac aatctgccaa tattgttcta aaaaagcgac
     4441 aatggttttg agaacacagg atggaaaacc tacttatgaa ggagaacaaa tccaaattgg
     4501 tggcaatgaa acctacattc ctgtctgtcg caaacattat ttttcaccag aaattaaaga
     4561 attaccctaa tttttgaaaa tgaaatgaga agcgactgta aattgagcaa ctgtatagaa
     4621 ctgaatttgc ctatgactct gtgccaattt tcatgactta catactacgg caaaggaatt
     4681 gaacacgccc tacaagctaa ctagaagtgt gttctgtcaa atatttagaa aggaattgaa
     4741 tacgggctac gaactgtgca aaaaagatag tttttcctag gacgctttcg tccttcgtca
     4801 aaactcctat ttttgctttg ttcgtttaac gcccttaata tcttaaaatt atgaacatct
     4861 acgatcaatt acaggcggtg gaggaccgct acgaggaact tggtgaattg ttgtctgacc
     4921 ctgatgtagt cagcgatacc aagcgtttta tggagttgtc taaggaagaa gctgcaactc
     4981 gtgatacagt aacagcctac cgcgaatata agactgtact tcaaaacatg gtcgatgcag
     5041 aagagatgat taaagaatcc tttggcgatg ctgatttgga ggaaatggct aaggaagaac
     5101 tcaaacaagc taaggctgat aaagaggctt acgaagaaaa gctgaaaatc cttcttttac
     5161 caaaagaccc taacgatgac aaaaacatta tcttggaaat ccgtggtgcc gcaggtggtg
     5221 atgaagccgc cctctttgct ggagaccttt tgaccatgta tcaaaagtat gcagaaggtc
     5281 aaggctggcg ttttgaagtc atggaggctt cttataatgg tgtcggcggt atcaaggaag
     5341 tggttgccat ggtctctggt caatccgttt attcaaaact caagtatgaa tcaggagctc
     5401 accgtgtcca acgtgtccct gtgacagaaa gccaaggtcg tgtccacacc tcaacagcaa
     5461 ctgtcctcat catgccagaa gttgaagaag tggaatatga catcgatcca aaagatcttc
     5521 gtgtcgatat ttaccacgct tctggtgctg gtggacagaa cgtcaacaag gttgcaactg
     5581 ccgtgcgtat cgttcacttg ccaaccaaca tcaaggtaga aatgcaggaa gagcgtactc
     5641 agcagaaaaa ccgtgaaaaa gctatgaaga ttatccgtgc ccgtgttgcg gatcactttg
     5701 cacagattgc ccaagatgag caggatgctg agcgtaaatc aactatcggt acaggtgacc
     5761 gttcagagcg tatccgtacc tacaactttc cacaaaaccg tgtgacagac caccgtatcg
     5821 gcttgacctt gcaaaagctc gataccatct tgtcaggtaa gatggacgaa gtcgttgatg
     5881 cccttgttct ctacgaacag acgcaaaaac tagaagagct taacaaataa tgaattacgc
     5941 tcaattattt gcagcatacg aagaacaatt agtcgcaatc ggtgaagagg cagagtctct
     6001 gtccttcacc tttcgtggct taaagggatt gaactttacg gaatttctcc tcctgctccg
     6061 tcaggaagtc acaccgactg acaaagaaga gattgatgcg atttttcagc aactttccca
     6121 acaccgacct gcccagtaca ttatcggcaa ggctgatttc catggcttgg agtttgcggt
     6181 ggatgagcga gtcttgattc caagacctga aacggaagaa ttagttgatt tgattttgca
     6241 ggaaaatagc agagcaggtt tgcgtatctt agacatcggt acaggaagcg gtgccatagc
     6301 tatttccctt gcaaaagcta gacctgattg ggaagtggta gcggttgaca tttcaaatga
     6361 tgccctagca gtggctcagg aaaatgcaag aaccaaccaa gtctctgttc actttctaga
     6421 atcggatgtc ttgcaagcag tgacagggaa atttgacatc attgtttcta atccgcccta
     6481 tatctcacca gatgacacag atgaagttgg actcaatgta ttgacttctg agcctcatct
     6541 ggccttattt gcggaagaag atggcatggc tatctatcga caaattgcgg agcaagcagg
     6601 ggcatttttg aaggaaaaag gaaaactcta ctttgaaatc ggctacaagc aagggcaaga
     6661 tttaaccgac ttactcgctc tgcatttccc caaaaagcga attagagtcc tcaaagacca
     6721 atttggacag gatagaaagg tcgtagcgga tgacaatgga taaactccga acaattcttg
     6781 aaaatggtgg tgctgttatc cttccaactg aaacagtcta tgggcttttt gcccaagcct
     6841 tgaatgaaga tgcagtcaat cgtgtctatc agttgaaaca gcgtccgagg gacaaggcaa
     6901 tgaacttaaa tgtctcaaat ctgaacgata tttatttttt cagtcaaaat acaccatttt
     6961 ttctggagaa attgtataat agatttatgc caggaccact aacgattatc ctgaaagcaa
     7021 acgaaaatgt tcctttttgg gttaattctg gactggatac tgttggattt cgtcttccca
     7081 atcacgaaca aaccttacgt ttgatttcag aggctggccc acttattgga ccttccgcca
     7141 atatttcagg aaacgaaagc ggcaagaagt tttcggacat ccaggcacaa ttttcagttg
     7201 atttgcctgg cattgaggat gaccaagctc taacaggcat tgattcaacg attttggacc
     7261 tttctggaca gaaagcgcgg attttgcgcc aaggcgctat cagccgcgaa gagattcaga
     7321 aagccattcc cgaaatagaa tttgaggtag ttttatgatt cgtcccattg agaaaagtga
     7381 cttgatagtc atccgagaaa tcaatgctca atccttaggg tatgattgtt cattggaaca
     7441 aactgagcga caatttttta gatgcacgag tacattgggg catatcttgt tggtgtatat
     7501 agatgacata agtggcgcag tgcaaggcta cattcacgca caagtctatg aaagtctcta
     7561 ttcggataca ggcctcaata ttctcggact agctgttttg cctggtcatc aaggacaagg
     7621 gattggagca agcctgctga aagccgttga gcagattgca cagaaagagg gctaccattt
     7681 tattcgcctc aattctgctg aaagtcgtct caaagcccat cttttctacg aaaagaatgg
     7741 ctatcactcc gataaaatgc agaagcgttt tatcaagcac atttagccca atacaaagga
     7801 gtaccgtata tgatttttga caaagttaac tacaaagaat ttgataaaga agtttgggaa
     7861 gctatccaag ctgaagaaaa acgccagcaa aacaatattg aattgattgc gtctgaaaac
     7921 gttgtttcta aagctgttat ggcagctcaa ggttctattt tgaccaataa atacgcagaa
     7981 ggttacccag gtcgtcgtta ctatggcggt acggaatgcg ttgacgtagt tgaaagttta
     8041 gctattgaac gtgctaaaga aatattcggt gcaaaatttg ctaacgttca accacactca
     8101 ggaagccagg ccaattgtgc tgcctacatg gccttgattg agccaggaga cactgttatg
     8161 ggaatggact tagctgcagg tggtcacttg actcacggtg catcagttag cttctcagga
     8221 caaacttaca actttgtagc ttacaatgtt gacgaagaaa ctggcttgct tgattacgat
     8281 gcaattttaa aacaagcaaa agaagtacag ccaaaattga ttgtagcagg tgcttcagcc
     8341 tatgcacgta caattgactt tgctaaattc cgcgaaattg cagatgcagt gggtgccaaa
     8401 ctgatggtgg atatggctca tattgctggt cttgtagcag caggtcttca tccgaaccca
     8461 gtgccacatg cccatattac aacaactaca actcataaaa cgcttcgtgg tcctcgtggt
     8521 ggattgattt tgacgaatga caaagaactt attaagaaaa tcaactcagc cattttccct
     8581 ggaattcaag gtggtccact agaacatgtc attgctgcaa aagccgtatc tttcaaagaa
     8641 gttttggacc cagctttcaa agactatgct cagaaagtga ttgagaacag caaggccatg
     8701 gccgaagtct tccttgcaaa ccctaacttt aaagtcatca caggaggaac agacaaccat
     8761 ctcttccttg ttgacgtgac caaagttgtt gaaaatggta aagttgctca gcatctcttg
     8821 gatgaagtaa atattactct caataaaaac tcaattcctt acgaaaaact ctcaccattc
     8881 aaaacaagcg gtatccgtat tggctctgcg gccattactg ctcgtggttt tggagtcgag
     8941 gaagctcgca aggttgcaca actaactatc aaagcacttg aaaatgcaga aaatgaaacc
     9001 gctcttgagg aagtccgtca agaagtgcgt gctttgacag atcaattccc actttacgaa
     9061 ggtttataat ggatatattt gtaaaaaaag ccatcataca tcaatttagt cctgatgata
     9121 cagagctggt catttccgac cagcttttga ctgttagccc aaaaatagaa gaatatttgc
     9181 gtaaaaagat tgaacgtgtc ttttctgatg aagcaaaaac aggacaattt aaccccgata
     9241 atccttttct tgactattta gatggtgacc tactgaccaa ctctgtcaag attgctaatc
     9301 tatggaaaga agaattttca atttctgaga atttaaaaac caatgacctc attttcatag
     9361 agtttgaacg aaatggtgtt gaacattttg cctttttgag aatctcactg cgtgaaaatc
     9421 tcgcccacgt tggtcttgaa agcggaagtc ctttaaaaat cacccagaat aatttacctg
     9481 gagcaggttc agcacctgat gaagccttga ttgtcaatct tcaaacgcgg aagtatcatt
     9541 tgattgagaa aagaatcaaa cacaatggaa ccttcctcaa ttatttctca gataatcttc
     9601 tgcaagttac accagctatt tctgcaaaaa aatcaatcaa agcagtagag caaactgcac
     9661 agaagattgc tgacaatttc catcaaggcg attttcaatt tcaatcgaaa gtcaagtcag
     9721 ctattttcaa caatttggaa gaagacaatg agctttcacc cgaaaaattg gctgatcagt
     9781 tattcgataa caacctgacc gctcgtttaa atttcgtcga tcaactgaaa gaggtcatac
     9841 ctgataagat ttccttcgat gaaattgata gtagccgtca acttaagaaa tttgaaaatc
     9901 agaagctatc tttatcaaac ggaattgagt tgattgtgcc aaatgcaatc tatgaagatg
     9961 cagaatcggt tgagtttatt caaaatgaca acgggaccta ttctattctt atcaaaaata
    10021 ttgaagacat aaagagcaag taaatgaaaa aactgatacg tacgctgata cttcttttac
    10081 tgatttttct cggttacaaa ttctatcaaa cctacagtgc agtcaagcaa gtgatgacct
    10141 atcaaactat ggtacaagaa gtattggctg aaaacgacac accagctaat gaagaactag
    10201 tcctagcaat gatttacaca gaaaccaagg gacaagaagc agatgtcatg caatcaagcg
    10261 agtccgctac tggctatgct aacactatca cggatagtag agagagtatc aggcaaggaa
    10321 ttatctacct gacagaaaac ctacggttgg ctgaggaaaa aggagtagag gtttggacag
    10381 cagttcaggc atataatttc ggtccagcct atattgacta tattgctgag catggtggag
    10441 aacatactct ctctttagct aaagaatact ccagaacagt agtagcacca agcttaggga
    10501 atactacaga agaaacatat acctattttc atcccttggc tttgctaaat ggtgggaagt
    10561 tatatgtaaa tggtggaaat atctactatg ctagacaggt tcgttttaat atgcacctga
    10621 tgcgcctcat taatttattt taatacctat caaactcatc ggaaatctga tgagttttta
    10681 actacagcat ttttacaaac taggtaaaat tgtagtataa taaagagaat aggagacaga
    10741 gtgatgaaac gaaatgtatt gattacaggt gcaagtagtg gcattggcaa agcaatcgct
    10801 tatgtgtttg ctgctaatgg tgataatatc atcattacag gacgaagatt ggacaaacta
    10861 gaagaaatta agcaagatat tgaaaagcaa taccatgttc aggtatcagt tcattcattt
    10921 gatgttacga atatggaaca aacgattgta aattgtcaaa aaatcttaga agaagttgga
    10981 caaattcata ttttggtaaa caatgctggc ctggcattgg gattggacaa attccaagac
    11041 tatgatttga ctgacatgat gacaatgatt gataccaata ttaaaggatt actaactgtg
    11101 acacgtcagt tattgccaca aatggttgaa aataatgagg ggcatattat caatattgga
    11161 tcaacggccg ggatttacgc ctatgcagga gctgctgtct atgctgcaac caaatcagct
    11221 gtcaaggtgc tttcagacgg tatccgtatt gacacgattg ataaaaatat caaggtaact
    11281 acgttacaac ccggtatcgt tgagactgat tttagccaag tccgttttca tggagataaa
    11341 gagagagcag cgtcagtcta tcaaggaatt gatgctcttc aagcaaatga tattgccagc
    11401 tgtactctat ttgttgcaaa tcaacctgca catgtgcaga tttctgatat gaccattatg
    11461 gcaaccaaac aggcaactgg ctttactatt catagagatt agaggggaga tagctagaat
    11521 gaacagaaaa tatttagcac tcgctcttgg cttgctcact atcatgtcgc tttctgcctg
    11581 tcaaactgaa aagaagggca gttccgcaag tagctcaact gctgataccc aggttcctaa
    11641 tgccaataca agcacgtcat caacagtcca acgtgagatt tctcttagtt ctatggatat
    11701 agatgctcta atgcaaggca attacgatag tatactaggc acctggcaaa atagccaagg
    11761 aaattcacta gtcttcaata gcaaaggatt agtagcagat agccaatcct tacttggccg
    11821 cggaaaaata actgacggaa tttttgaaac aggctatgta gacgcaacga ttggcgatgt
    11881 aacactatta atgattccca aaggaacaca agcaaataca actgagatag acactactga
    11941 ctctacgcgc gatagaatga ttgtaataag ccaagaaaca acagccgacg tggtagatgt
    12001 ctattatcgc ttgaccaatt cagccactag cggtatagac ccattaaaaa atactgaaac
    12061 aggcgtccag ttggatagtg gaccaaaaac gattgattat gccaactcaa ttttaggcga
    12121 aaacaactgg cgcgtcattg aaggtaacta cacgcgcacc gaatctattc cttataatgt
    12181 tttggaaggc gatgataatg cccgttacac tatttaccaa aacggtgtca ttatcaatgc
    12241 agattatcaa attgtttatc aaccataatg attctctagg aggttagaca tgacattcac
    12301 atcatttgaa ccaacacgca atgtgtaaga ttttcatttg gcagcctttg cctactatga
    12361 tggactagat gtaatcgacc aactcaagcc aggaacacct gttcagctag tcggagagcc
    12421 ttcaaaccca catgattcag aagctgtagc aatcttttat cagggcacaa agttaggata
    12481 tatcccatcg gataaaaact cactaatcag tcggttaatc tattttggac acggcgatat
    12541 tctagaggca cgtattcaga tgtccaatac agaaaatcat cctgatcgcc agtttcgagt
    12601 cgttgtaaaa ctaaaagata atcgtaaaaa tgatagtcgg taatttacca acctacccat
    12661 tttctactta acacggagct gtgctctctg tttttgttct tcaataatgc ttaaaaaggc
    12721 tgcaaactcc ctatccaggc gatgttggta ggccttattt t
//
LOCUS       DASFQD010000066        12742 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.066, whole genome shotgun sequence.
ACCESSION   DASFQD010000066 DASFQD010000000
VERSION     DASFQD010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 12742)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12742)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12742
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.066"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            63..2204
                     /locus_tag="U1021_001432"
     CDS             63..2204
                     /locus_tag="U1021_001432"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GH92 family glycosyl hydrolase"
                     /protein_id="HEM4711967.1"
                     /translation="MYTSIVSTIDTRYGTYNSHAFSNGNTLPLTGAPFGMNYFAPQTS
                     DQTGNWWFNPYEPVYQGIRLTHQPSPWLGDFASLLLTPVTGELSRDSLFHRQSSYQLD
                     QAIFRPDLLQLQSNRFRLISRLAPSRYGASFEIASFANQPIGMVFYSSGKSIYRLLNP
                     HQLLIQIFQVSACQSPDFCMYALLEFEEEITECYHLVKDRKIAKTEVVGEDLHLRINF
                     SSTSIKGRLATSFISPEQAAFLLKDVPDFPQAQKQAENTWNQLLGRIQIRDKKTEDIN
                     FFYHCLYRCLLYPQTFYEPSPDGQAIHFDPISNQAKLGKFFTNNGYWDTFRSSYPLLS
                     LIYPDYLEKFLHGILQHYRDTGFLPKWLSPDERGIMPGTLVDGVIADAACKGLVPDLM
                     EDFLQAMIETSQKTDADQRYGRHGSQIYRQLNYLPLDFNESVSHSLDYAYSDWAISQV
                     AEKLGQDQLAKQYAQMCLGYRQLFDSQTGLMRAKDRQKQFRADFSPLSWGRDYAECSA
                     LQATLSVFHDIDGLIELMGGKEAFTNYLIQLCNQEPYFSPEQYGYEIHEMSEMAQVNL
                     GQLAISNQPSFHIPYLFQWSTKPEYTSLLIHKIRQTAFKTGFQAYPGDEDNGSLSAWY
                     IFSCLGFYPVCPGKADYQIGLPHFKEVDLLLADQHKLTISTPKSDANFQFVKQVSLDK
                     QVVQTIKHDQLIKSNCLEFDLSILPSNEAHS"
     gene            complement(2244..6719)
                     /locus_tag="U1021_001433"
     CDS             complement(2244..6719)
                     /locus_tag="U1021_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterial Ig-like domain-containing protein"
                     /protein_id="HEM4711968.1"
                     /translation="MTKCDFDKRERFGIRKFTIGACSVLIGATLFGTQVSADQLENVD
                     SLSEPAVELSSVVNEHVEKIEAEEGMSPISADEKAVTEELNGEVSVSDSREEKLPSAP
                     SDNPENKLEDIEEAEDKEIDSSDSGLLLSDFPQVEDQGIRPKEIKFDNWDQVLTWEPG
                     ARPDDDLNRASVELVERFRGHVVNERANENAKVEALSNTNSKAKDHASVGGEEFKAYA
                     FDYWQYIDSMVFWEGLIPSPDVIDAGHRNGVPVLGTIFYNWSSSIEDQEKFVSSLRQD
                     PDGSFPVARKLVDMAKYYGFDGYFINQETTGSLVQPLGETMRNFMLYTKEYAESIGYP
                     ITYSWYDAMTYEYGRYHEDGLGEYNYPFMEKEGDKVPADRFFANFNWTRAKNNNSIEV
                     AKRIGRDPFDIFAGFELQRGGSYKTQINWDALFDENGKLKLSLGLFAPDTITSLGATG
                     EDYHENENIFFTGYQGDPTKQKPSDKNWYGLANLIADKTAITSSNFNSSFNTGHGKKW
                     FVDGKVAKDGEWNYRSVSGILPTWRWWIEASGEKLAAAYDFDDAYNGGNSLRFTGDLE
                     KDGKQEVKLYSTKIPLTETSRLRVAHKGGLGANISLALALEPDYQFANKEAWRLLKLS
                     GDWQDQTFDLSSLAGKTVYGIQVVVENEAALSDFDFRLGQLAIYDQENSPTAPKDGQV
                     LTKRLKNAQDAEAVISFTGTDDADYYEVYAQVDGQWKLLTGSSNTRIYLPQLVRSAQA
                     EGRTQALKVHAVGKNGLRSEAGEFIFDWEMTVKDTSLPKPLAENIVLGAEVIGSSFAK
                     KEGGEGIEGMLNGTITSLSDKWSSHQLSGHVDIRLTQPRTVVRWAMDHAGAGGESVND
                     GLMNTKDFDLYYKNENGDWVLAKEVRGNRDHVTDIVLDKPIRAQEWRLDVLTSDNGTP
                     WKAIRIYNWRMYEELDMETPNIPMPHAVARHLGNHQIQVGFKDVPANRKIALYSSPDA
                     VKPLAELETTESGNLIFDPIRFESLPEFIYYRTLEEGKDWSNLLAIRVPQGEKVVKAM
                     EWIAPLEKKVYRQGSPLSLAGAQFRVAFEGDWPAERVNTTNPAVTVRGFDPQKLGEQT
                     LTVSYLGETLAQPLMVYVVEDMAQGEKKAVGLEIQQLPKVQYIVGDDLDVTNGRFAII
                     YDDESTQSISLTEAGVEIVGFDSHQEGRQSLGLRYAGLETSFDVLVSPKPIVNDEYLK
                     QKIAEIEALQTQTAYLYSSEQTQLALQTALEEAKSVVADTNRTVEQVEAAQTLLEKQL
                     GELDGEKLYQADLGRLNQLIQEVKGIDRPINSSELSSLLEKTEKILGSDSIRPDEMKE
                     LLSEWTDLFEQSSLVTHVGTRDSMESKNLLAPEKPRMDLTYELVPRQIITRTSTDLPL
                     GKERIVQEGADGQMMVAHLVYSDGRRELYSRTVADESQPKIVEVGSGLPIQQEKTLMV
                     ENSPQVEKQIRDASLQKSGLPQTGDTYQEKYVLLGLFGVALAGLSQLAKLRKQGE"
     gene            complement(6965..7363)
                     /locus_tag="U1021_001434"
     CDS             complement(6965..7363)
                     /locus_tag="U1021_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mini-ribonuclease 3"
                     /protein_id="HEM4711969.1"
                     /translation="MTKAVDVNLINGIALAFEGDAVYSMYVRRHLIFKGLTKPNKLHG
                     EANKYVSAKAQASLISALLEAQLLTEKEEEIYKRGRNTNSHTKAKNADVVTYRMSTGF
                     EAVLGYLHMTEQMERLDELVGWCIKFVENN"
     gene            complement(7356..8699)
                     /locus_tag="U1021_001435"
     CDS             complement(7356..8699)
                     /locus_tag="U1021_001435"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002916477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEM4711970.1"
                     /translation="MIKIYDTMTRSLRDFVPLEEGKVKMYVCGPTVYNYIHIGNARSV
                     VAFDTIRRYFEYRGYDVTYISNFTDVDDKIIKAANEAGMTTKELSDKFIAAFKEDVAK
                     LGVKPATKNPRVIDYMGEIIDFVQVLIDKGYAYEASGDVYFRVEKAENYARLANKTLS
                     DLEAGASGRVEGEGQLKEHPFDFALWKTAKPGEVSWESPWGAGRPGWHIECSVMATEI
                     LGATIDIHGGGADLEFPHHTNEIAQSECKTGQTFANYWMHNAMLNINDEKMSKSLGNF
                     LTAHDMLEQIDGQVLRFFLSTQHYRRPLNYTEKAISDAEINLKYLKNTYTQPVQNSVD
                     KSALELHLAAFEAAMDDDFNAANGITAIFDFAKWINSGNYDETVKEAFGKMLEVFGIV
                     FEEEVLDSEIEALIEERQAARANRDFATADRIRDELAAQGIKLLDTKDGVRWTRD"
     gene            complement(8710..8895)
                     /locus_tag="U1021_001436"
     CDS             complement(8710..8895)
                     /locus_tag="U1021_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711971.1"
                     /translation="MLKKLVRQNWPYVLTAIAGTIMFILKFSQGSWQVGMIWLAATAY
                     WLVKLYQKYQVLKNTQK"
     gene            complement(8889..9662)
                     /locus_tag="U1021_001437"
     CDS             complement(8889..9662)
                     /locus_tag="U1021_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside phosphorylase"
                     /protein_id="HEM4711972.1"
                     /translation="MLLEEFENTSAVIEPTDMAIRGGGEVCETMIFSFNGEIVDRVRQ
                     LPESREGGYLESINGRHPWYILERDGVRVAVMLAVIGAPMAVGHLEELKACGFENFIV
                     LGSCGVLDKSLVADKIILPSSALRDEGTSYHYAPASDEISYDPALLLTMEKALDQAGI
                     EHVRAKTWTTDAFYRETSAKVKRRLAAGAMVVDMEASAIMAWANFRQAKVYQFFYTAD
                     YVDYHKNEWDARREERTADSMTFFEVAMAIARKLESTSC"
     gene            complement(9677..10294)
                     /gene="cysE"
                     /locus_tag="U1021_001438"
     CDS             complement(9677..10294)
                     /gene="cysE"
                     /locus_tag="U1021_001438"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000539958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEM4711973.1"
                     /translation="MGWWKDTIEIVKEKDPAARTTLEVLLTYPGVKALAAHRLSHWMW
                     KKGFKLLARMHSQFWRFWTNIEIHPGADIASGVFIDHGAGLVIGETAIIESGVMLYHG
                     VTLGGTGKDTGKRHPTVRKGALVSAHAQVIGPIEIGENAKVGAAAVVLADVPADVTVV
                     GMPAKIVRVHGQKDEKVIHDMEDGREHYTTKLAELREASHRSSHL"
     gene            complement(10348..12567)
                     /gene="pnp"
                     /locus_tag="U1021_001439"
     CDS             complement(10348..12567)
                     /gene="pnp"
                     /locus_tag="U1021_001439"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEM4711974.1"
                     /translation="MSKQVFETVFAGKKLVVETGQVAKQANGAVVVRYGDSTVLTAAV
                     MSKKMATGDFFPLQVNYEEKMYAAGKFPGGWMKREGRPSTDATLTARLIDRPIRPMFA
                     EGFRNEVQVINTVLSYDPDASAPMAAMFGSSLALAISDIPFNGPIAGVQVGYVNGELI
                     INPDKAQMEESLLDLTVAGNKDAINMVESGAKELSEDIMLEALLKGHEAIQELLDFQN
                     QIVAAVGKEKADVELLQVDPELQAEIVAAYNDDLKKAVQVEEKLAREDATNAVRETVI
                     AAYEEKYAEHEEFDRIMRDVHEILELMEHAEVRRLITEDKVRPDGRRVDEIRPLDAEV
                     DFLPNVHGSGLFTRGQTQALSVLTLAPMGETQIIDGLGDEYKKRFLHHYNFPQYSVGS
                     TGRYGAPGRREIGHGALGERALEQVLPSLEDFPYAIRLVAEVLESNGSSSQASITAGT
                     LALMAGGVPIKAPVAGIAMGLISDGTNYTVLTDIQGLEDHFGDMDFKVAGTRDGITAL
                     QMDIKIDGITPQILEEALAQAKKARFEILDVIEATIPEVRPDLAPTAPKIDTIKIDVD
                     KIKIVIGKGGETIDKIIAETGVKIDIDEDGLVAIFSPDRDAIERTKEIIAGLVREAKV
                     DEVFQAKVVRLEKFGAFVNLFDKTDALVHVSEMAWTRVNKPEDLVEIGDIVDVKVIKI
                     DDKGRIDASMKALLPKPEGYVEPEKRERSDRPRRHKDNKEKKDNNFGEFKFHKVEKK"
BASE COUNT         3403 a         3289 c         2477 g         3573 t
ORIGIN      
        1 ctcgtcgaag taataaaaga aaaaataaat gacgataaaa taaaaaaaga aaaggatagc
       61 ctatgtatac ctccatcgtt tcaaccattg acacccgcta tggtacttat aactcacatg
      121 ccttttcaaa cggaaacacc ctaccattga caggtgcccc tttcggcatg aattattttg
      181 ctccccagac cagcgaccag actggaaact ggtggttcaa tccctatgaa cctgtctatc
      241 agggcattcg cttaacccat caacccagtc cttggttggg agattttgcc tccctcctat
      301 tgacgcctgt cacaggcgaa ttaagccgag atagcctctt tcaccgtcaa tctagctacc
      361 aactggatca ggctattttc cgacctgacc tccttcaatt acaatccaac cgctttcgct
      421 tgataagccg tttagctccc agccgatacg gagccagttt tgagatagca tcttttgcta
      481 accagcctat cggaatggtc ttctattcat ctggaaaatc catttatcga ctgctcaatc
      541 ctcaccaact cctcattcag atttttcagg tcagcgcctg ccaatcccct gatttctgca
      601 tgtatgctct cctagaattt gaagaggaaa taacagaatg ttatcatctg gtcaaagatc
      661 gcaagatagc taaaacggaa gtggtgggag aagatttgca ccttcgcatc aacttctcaa
      721 gcacttctat caaggggcgc ttggctacct cttttatcag ccctgagcag gccgcctttc
      781 tattgaaaga tgttcctgac ttcccccaag cccaaaaaca agcagaaaac acctggaatc
      841 agctcttagg acgtattcaa attcgtgaca aaaaaacaga ggacatcaat ttcttctacc
      901 actgcctcta ccgttgccta ctttacccac agactttcta tgaacctagt cctgatggac
      961 aagccattca tttcgaccct atcagcaatc aggccaaact aggtaaattt ttcaccaaca
     1021 acggctactg ggacaccttc cgttcctcct atcctctgct ttcacttatc tacccagact
     1081 atttggaaaa gtttctccac ggcattctcc aacactatcg agatactgga tttttaccca
     1141 aatggttatc gccagacgag cgcggtatca tgccaggaac tcttgtggat ggagtcattg
     1201 ctgatgcggc ctgcaaggga ctggttcctg atttgatgga agattttctc caagccatga
     1261 ttgaaaccag tcaaaagacc gatgcggatc aacgttacgg ccgtcatggt agtcagattt
     1321 accgccagtt aaactatctt ccccttgatt tcaacgaatc tgtgagccat tctcttgatt
     1381 atgcctacag tgattgggct atcagccaag tagcagaaaa actggggcag gaccaactgg
     1441 ctaagcaata cgctcaaatg tgcctcggct accgacagtt attcgatagc caaacaggtc
     1501 tcatgcgtgc caaggataga cagaaacaat tccgagcaga tttttcccct ctaagctggg
     1561 gaagagacta tgccgaatgc tctgccctac aagcaaccct gtccgtcttt catgacatcg
     1621 atggactgat agaattgatg ggcggaaaag aagcctttac caactatcta atccagctct
     1681 gtaatcagga gccctatttc tcacctgaac aatacggcta cgaaatccac gaaatgtcgg
     1741 aaatggcgca agtcaatctc ggtcagcttg ctatttcaaa tcaaccgagc ttccatatcc
     1801 cttatctttt ccaatggtcc acaaaaccag aatacactag tctactcatt cacaaaataa
     1861 gacaaacagc tttcaagaca ggttttcaag cctatccagg tgacgaggat aacggtagcc
     1921 tttcagcctg gtacatattc tcctgtctag gcttctatcc tgtctgtcct ggaaaagccg
     1981 actaccaaat cggactacct cattttaagg aagtagactt gctacttgca gatcaacaca
     2041 agctgaccat ttctactcca aaaagcgatg caaatttcca gtttgtcaag caagtttcat
     2101 tagacaaaca agtcgtccaa accatcaagc atgaccaact gataaaatca aactgcctag
     2161 aatttgacct atctatactt ccaagtaacg aggcacactc ttagaaaaat aaatagtcag
     2221 ggagcacccc ctgactattt attttattca ccttgctttc tgagcttagc taactgagat
     2281 aggccagcca gagccacacc aaataaccca agaaggacat acttctcctg ataggtatca
     2341 ccagtttgtg gaagaccgct cttctgcaga gaagcatctc tgatttgctt ttcaacctgc
     2401 gggctatttt ctaccattaa agtcttctct tgctggatag gcaaaccgct gccgacctcc
     2461 actattttcg gctgactctc atcagcaact gttcgtgaat acagctcgcg acgaccatca
     2521 ctatagacta ggtgagctac catcatttga ccatcagccc cctcctgaac aattcgctct
     2581 ttgcccagtg gcaaatcagt gctggtccgt gtgatgattt gtctcggcac cagctcataa
     2641 gtcaaatcca tcctcggttt ttcaggagct agtaaattct tagactccat cgaatctctt
     2701 gtaccgacat gagttaccag actagactgt tcaaacaaat cagtccattc actgagcagc
     2761 tccttcatct catctggacg aatactatcc gaacctaaaa ttttctcagt tttttcaagt
     2821 aaagaactca gctcagaaga atttataggc ctatctattc ctttcacctc ttggattagc
     2881 tgattgagac gcccaagatc tgcttggtaa agtttctccc catccagctc tcctaactgt
     2941 ttctctaaaa gagtttgagc ggcttcaacc tgctcgactg tccgattggt atctgctacc
     3001 acagacttag cttcttccaa ggcagtttgc aaggcaagtt gtgtctgctc actagaatag
     3061 agataggctg tttgggtttg tagagcctca atttctgcta ttttctgctt tagatactca
     3121 tcattgacga ttggcttcgg ggaaacaagg acatcaaatg aagtctccaa accagcatac
     3181 cgcaaaccta ggctctgacg cccctcttga tgggaatcga aaccaacaat ttctactcca
     3241 gcttctgtca aagagatgga ctgagttgac tcatcgtcat agataatagc aaatcgacca
     3301 tttgtgacat ccaaatcatc tcctacaata tactgcactt ttggtaactg ttggatttct
     3361 agaccgactg cttttttctc accttgggcc atatcttcaa caacatatac catcagtggc
     3421 tgagcaagtg tttctcctag ataggaaacg gtcaatgttt gttcacctaa tttttgcgga
     3481 tcaaatcccc ttactgtaac tgccggattg gtggtattca cccgttcagc aggccaatct
     3541 ccttcaaaag ctacacggaa ttgtgctcct gcaagcgata aaggactacc ttgtcggtaa
     3601 acttttttct ctaggggagc tatccattcc atcgctttca ctactttttc accttgcgga
     3661 acgcgaatgg ccaatagatt gctccaatcc tttccttcct ccagagtacg gtagtaaatg
     3721 aactcaggca gggactcaaa gcgaatcggg tcgaatataa gatttcctga ctctgtcgtt
     3781 tccaattctg ctagtggttt tacggcatct ggactagaat aaagcgctat tttccgattg
     3841 gcagggacat ccttgaaacc tacttgaatc tgatgattac cgagatggcg agcaacagca
     3901 tggggcatcg gaatatttgg tgtctccatg tccaattctt catacatacg ccaattataa
     3961 atacgaatgg ccttccaagg agtaccatta tcagaagtca agacatccaa acgccattcc
     4021 tgcgctcgaa ttggtttgtc caatacgatg tctgtcacat gatcacgatt gccacgaact
     4081 tctttggcta acacccaatc accattctca tttttataat agagatcgaa atccttggtg
     4141 ttcattaagc catcattgac cgattcacca cctgcaccag catgatccat agcccatcgc
     4201 acgactgtcc gaggttgggt caaacgaata tctacatggc cactcaattg atgggaagac
     4261 catttatctg acagactggt aatggtccca ttcaacatac cctcaatgcc ttctccacct
     4321 tcttttttag caaaacttga accgatgact tctgctccga gaacaatgtt ttctgccaac
     4381 ggtttaggaa gactggtatc tttcaccgtc atttcccaat caaagataaa ctcccctgct
     4441 tccgaacgca aaccattttt cccaacggca tgaactttca aagcttgggt tcgaccttct
     4501 gcctgagcag aacgaactag ctgagggagg taaatccttg tattagaaga acctgtcagc
     4561 aatttccact gtccgtcaac ctgcgcatat acttcataat agtctgcatc atctgtccct
     4621 gtaaagctaa tcacagcttc agcatcttgg gcattcttca atcgcttagt aaggacttgg
     4681 ccatctttcg gtgcagtagg tgaattttcc tggtcatata tagccaactg ccctaaacga
     4741 aaatcaaaat ctgacagtgc tgcttcattt tcaacaacca cttggatacc gtacactgtc
     4801 tttcctgcca gactagataa atcaaaggtc tgatcttgcc aatctcctga tagtttaagc
     4861 aagcgccacg cttctttatt cgcaaattga taatctggtt caagcgctag agctagggag
     4921 atatttgcac ctagccctcc tttgtgcgca accctcaaac gacttgtttc tgttagagga
     4981 atcttggtgg aatacaactt aacttcctgc ttaccatctt tttccaaatc gcctgtaaaa
     5041 cgaagagagt tgcccccatt atatgcatca tcaaaatcat aagccgcagc aagcttttca
     5101 ccacttgctt caatccacca ccgccaggtt ggtaaaatac cagacacaga gcgataattc
     5161 cattccccat ctttggcaac cttgccatct acaaaccatt ttttcccgtg ccctgtatta
     5221 aaggaactat tgaaattact gcttgtaata gccgtcttat ccgcaatgag attggccaag
     5281 ccataccaat ttttatccga aggtttctgt ttggttggat caccttgata gcctgtaaag
     5341 aagatattct cattctcatg ataatcctca cccgtcgcac ccaaacttgt aatggtatct
     5401 ggcgcaaaca gaccgagtga taatttcaat ttcccatttt catcaaacag agcatcccag
     5461 ttaatttgtg ttttgtaaga gcctccccgt tgcaattcaa atccagcaaa aatatcaaat
     5521 ggatctcgac cgattcgttt cgccacttcg attgaattgt tatttttggc ccgtgtccag
     5581 ttaaaattcg caaagaaacg atccgcaggg accttgtctc cttccttttc cataaacgga
     5641 tagttgtact cacccaaacc atcttcgtga tagcgaccat attcgtaggt catggcatca
     5701 taccaagaat acgtaatcgg ataaccaatc gattctgcat attccttggt atagagcata
     5761 aagtttctca ttgtttcccc tagtggttga accaagcttc ctgtagtctc ttgattaatg
     5821 aaataaccat cgaaaccata gtatttagcc atatctacca acttacgagc aacaggaaaa
     5881 cttccatcag gatcctgtct caaagaagac acaaacttct cttggtcttc aatactactg
     5941 gaccaattgt agaaaatcgt tcccaaaaca ggcacaccat tgcggtgtcc agcatcaatg
     6001 acgtctgggc taggaatcaa gccttcccaa aataccattg aatcaatata ctgccagtaa
     6061 tcaaaggcat aggctttaaa ctcttctccc ccaacagagg catggtcttt cgccttagag
     6121 ttggtatttg aaagagcttc tacctttgca ttctcattgg ctctctcatt gacgacatgc
     6181 cctctaaagc gctcaaccaa ctctacagaa gcacggttca aatcatcatc tggacgagca
     6241 cctggctccc aagtaagcac ctgatcccag ttgtcaaact taatctcttt cggacgaatt
     6301 ccttgatcct ctacctgagg aaaatcagaa agcaacagac cagaatctga agaatctatc
     6361 tctttatctt ccgcttcctc tatatcctct agtttatttt ctggattatc agacggagct
     6421 gaaggcagtt tttcttctct actatctgat acagatactt ctccattcaa ctcttcggtc
     6481 accgctttct cgtctgctga aattggtgac attccttctt cagcttcgat tttttccaca
     6541 tgttcgttca ctacggaaga gagttcaaca gctggctctg acaagctgtc cacattttct
     6601 agctggtccg cagaaacctg tgttccaaat aaggtcgcac caatcaaaac agaacaggca
     6661 cctattgtaa attttcgaat accgaatcgc tcacgtttgt cgaaatcaca ttttgtcata
     6721 ttttcctcct acacaattgt agtgcaacag ctgttctcaa tttcctcctt cccagatcat
     6781 agttggcaca tgctaccttt gatagaacag ctatcacacg aagtttatca ggttttatta
     6841 attccattgt acagaggaaa aatatgacct tcaagccctc atggtcccct tctttaaatc
     6901 agataaaaag aactttagtt tagagaaaac aaaaaagagg aagtttccct cctcgttgtc
     6961 ttcgttaatt attttctaca aacttaatac accagcccac cagttcatcc aggcgttcca
     7021 tctgctcggt catgtgcaaa tagcccaaaa ccgcctcaaa gcctgtggac atccgatagg
     7081 tgaccacgtc cgcattcttg gccttggtat ggctattggt attgcgtccc cgcttgtaga
     7141 tttcttcctc tttttcggtc aatagctgag cttctaaaag ggcggaaatc aggcttgcct
     7201 gagccttggc cgagacatat ttgttggcct ctccatgcaa tttattgggc ttggttagcc
     7261 ccttgaaaat caagtgccgt ctgacataca tggaatagac agcatcccct tcaaaagcca
     7321 gggcaattcc attgatgaga ttgacatcta ctgccttagt cacgtgtcca cctcacacca
     7381 tccttggtat ccaagagctt gatgccctgg gctgccaatt catcacgaat acggtcagcc
     7441 gtcgcaaagt cccgattggc acgcgctgct tgacgctctt ctatcaaggc ttcaatctcg
     7501 ctgtccaata cttcttcttc aaagacaata ccgaacactt ctagcatttt gccaaaggct
     7561 tcttttacag tttcatcgta attgcctgag ttgatccatt tggcaaagtc aaagatagcc
     7621 gtaatcccat ttgccgcatt gaaatcatca tccattgccg cttcaaaggc cgccagatgt
     7681 aattcaagag ctgacttatc cacagagttt tgcacaggtt gtgtataagt atttttcaga
     7741 tattttagat tgatttccgc atctgaaatg gccttctcag tgtagttgag tggacggcgg
     7801 tagtgctggg tagataggaa gaagcgcaag acctgaccgt caatttgttc caacatgtca
     7861 tgggctgtca ggaaattgcc caaggacttg gacatcttct catcgttgat attgagcatg
     7921 gcattgtgca tccagtagtt ggcaaaggtt tgacctgttt tgcactcaga ctgggcgatt
     7981 tcattggtat ggtgagggaa ttccaagtcc gctcccccac cgtgaatgtc aatggtagct
     8041 cccaaaatct ctgtcgccat aaccgaacac tcgatatgcc aacctggacg acctgccccc
     8101 cagggacttt cccaagacac ttcacctggc ttggcagttt tccacagggc aaagtcgaaa
     8161 ggatgttctt tcagttgacc ttctccctca actcgaccag aagcaccagc ctccaagtca
     8221 gacagggttt tgttggccaa acgagcataa ttctccgcct tttccacacg gaaatagaca
     8281 tctccagaag cttcataggc gtagcccttg tcaatcaaga cctgcacaaa atcgatgatt
     8341 tcacccatgt agtcgatgac acgaggattt ttggtagcag gcttgacacc cagttttgcc
     8401 acatcttcct tgaaagctgc aataaattta tcagaaagtt cctttgttgt catgccagct
     8461 tcattagcag ccttgataat cttatcatcc acatccgtaa agtttgaaat gtaggtcaca
     8521 tcatagccac ggtattcaaa atagcggcgg atggtatcaa aagccacgac actacgggca
     8581 ttaccgatat ggatatagtt gtaaaccgtc ggaccgcaga catacatctt gaccttaccc
     8641 tcttccaagg gcacaaagtc acgcagactg cgagtcatgg tatcgtaaat tttaatcata
     8701 gtttctccat tacttctgag tattctttag gacttgatac ttttgataca attttactag
     8761 ccaataagct gtcgctgcca accaaatcat ccctacctgc cagcttcctt gggagaattt
     8821 aaggataaac atgattgtcc cagcaatggc ggtcaacaca taaggccagt tttgtcttac
     8881 taattttttt aacatgatgt actttctaat tttcttgcaa tcgccatggc cacttcaaag
     8941 aaggtcatac tgtcagccgt ccgttcctct cgacgggcat cccattcatt cttgtggtag
     9001 tccacatagt ctgccgtgta gaaaaattga tagaccttgg cctgacgaaa gtttgcccag
     9061 gccatgatag cagaagcttc catatcgacc accatagcac cagcggctag gcgacgtttg
     9121 accttggcag acgtttcccg atagaaagcg tccgtcgtcc aggtcttggc ccgcacgtgc
     9181 tcgattcccg cttgatccaa ggccttttcc atggttaata gcagagcagg gtcatagctg
     9241 atttcatcac tggcaggagc gtagtggtaa ctagttccct cgtcccgcag ggcagagcta
     9301 ggaaggataa tcttatccgc aacaagcgac ttatccagca ccccacaaga gccaagaacg
     9361 ataaaattct caaagccaca ggctttcagt tcctccaagt gaccaactgc catgggagca
     9421 ccgattactg ccaacatgac cgcaactcgc accccatctc tttccaaaat ataccaagga
     9481 tgacgaccat taatgctttc taaatagcca ccttctctgc tctcaggtaa ctgacggaca
     9541 cggtccacaa tttccccatt gaaggagaaa atcatggtct cacaaacctc tccgccacca
     9601 cgaatggcca tatccgtcgg ttcaatgact gcagaggtat tttcaaattc ttctagtagc
     9661 acgtcaacct tctttcctac aagtgcgatg aacggtgact agcttctctc agctctgcta
     9721 atttagtcgt gtagtgttca cgaccatctt ccatgtcatg aatgaccttc tcatcttttt
     9781 gaccgtgtac acggacgatt ttggctggca taccgaccac tgtcacatct gctggaacat
     9841 cggctaggac aacggcagct gcaccaactt tggcattttc cccaatctca atgggaccaa
     9901 tgacttgagc gtgggcagaa accagagccc cttttcgcac agtcgggtgg cgcttgcctg
     9961 tatccttgcc cgttccacca agcgtaactc cgtggtaaag catgacacct gattcaataa
    10021 tggcggtttc tccgataacc aaaccagctc catggtcgat gaagacacct gaagcaatat
    10081 ccgcccctgg atgaatttca atattagtcc aaaaacgcca aaattggctg tgcatcctag
    10141 ctagtaattt aaagcctttt ttccacatcc aatgggacag acggtgggca gccaaggcct
    10201 tgacacctgg gtaggtcaaa agaacttcca aggtcgtccg tgctgccgga tctttttctt
    10261 ttacaatctc aatggtgtcc ttccaccaac ccatagtcac tccttctagc gagaagacaa
    10321 gcccgctacc gaacttgtct actcagctta tttcttttca accttgtgga atttgaattc
    10381 accaaagttg ttatcttttt tctctttgtt gtctttatga cggcgtggtc tgtcagaacg
    10441 ctcgcgtttt tctggctcca cataaccttc tggttttgga agaagagcct tcatagaagc
    10501 gtcaatacgt cctttatcat caatcttgat gactttaaca tcgacaatat cgccgatttc
    10561 aactaggtct tctggtttat tgacacgagt ccaagccatt tcagaaacgt gaacaagggc
    10621 atctgtcttg tcaaagaggt taacaaaggc accgaatttc tccaaacgaa caacttttgc
    10681 ctgaaagact tcgtccactt ttgcctcacg aacaagacct gcgatgattt ccttggtccg
    10741 ctcaatcgca tcgcgatctg gtgagaagat cgccacaaga ccgtcttcgt caatatcgat
    10801 tttcacgcca gtttctgcaa taatcttatc gatggtttcg ccacccttac cgataacaat
    10861 cttgatctta tctacatcaa tcttgatagt gtcaatcttc ggtgcagttg gtgccaagtc
    10921 aggacgaact tctgggatcg tcgcttcgat gacatcgagg atttcaaaac gtgccttctt
    10981 agcctgtgcc aaggcttctt ccaagatttg cggtgtgata ccgtcaatct tgatgtccat
    11041 ttgaagggct gtgataccgt cacgagtacc agccaccttg aagtccatgt cgccgaagtg
    11101 gtcctcaaga ccttgaatat cggtcaagac ggtgtagttg gtaccgtctg aaatcagacc
    11161 catggcaatc cctgcaactg gtgccttgat tggcacacca cctgccataa gggcaagggt
    11221 accagctgtg atagaagcct gtgatgaaga accgtttgat tccaaaactt ctgctaccaa
    11281 gcggatagcg taagggaagt cttccaagct tggcaagact tgctcaagag cacgctcacc
    11341 gagagcaccg tgaccaattt cacgacgacc tggtgcacca tagcgaccag ttgaaccaac
    11401 tgaatattgt gggaaattgt aatggtgcaa gaagcgtttc ttgtactcgt cgcccaatcc
    11461 gtcgatgatt tgagtttcac ccattggggc caaggtcaag actgaaagtg cctgagtttg
    11521 accacgggta aagagacctg agccatgaac gtttggcaag aagtccactt ctgcgtccag
    11581 cggacgaatt tcatccacac gacgaccgtc tggacgaacc ttgtcttctg taatcaaacg
    11641 acgaacctct gcatgctcca tgagttccaa gatttcatgg acatcacgca tgatacggtc
    11701 aaattcttcg tgttcagcat atttttcttc gtaggctgcg atgacggtct cacgcacggc
    11761 attggtcgca tcttcacggg ccaatttttc ttctacctgc accgcttttt tcaaatcgtc
    11821 attgtaagct gcgacaatct cagcctgcaa ttctgggtcc acttgaagaa gttccacatc
    11881 tgctttttcc ttgccgactg ctgctacgat ttgattttgg aagtcaagga gttcttgaat
    11941 agcctcatga cctttgagga gtgcctccaa catgatgtct tctgacaatt ctttggcacc
    12001 agactctacc atgttgatag catccttgtt accagctact gtcaagtcaa ggagagactc
    12061 ttccatttga gccttgtcag ggttgatgat gagttcacca ttgacataac caacctggac
    12121 acctgcgatt gggccgttga atgggatgtc tgagattgcc aatgccaatg aagaaccaaa
    12181 catggctgcc attggagctg aggcatctgg atcgtaagaa aggactgtgt tgatgacttg
    12241 gacttcgtta cggaagcctt ccgcaaacat tggacggatc ggacggtcaa tcaaacgagc
    12301 tgtcaaggtc gcatcggttg acggacggcc ttcacgcttc atccagccac ctgggaattt
    12361 ccctgcagcg tacattttct cttcatagtt gacttggagc gggaagaaat cacccgttgc
    12421 cattttcttg gacataactg ccgctgtaag gactgttgag tcgccatagc gaacaacaac
    12481 cgcaccattg gcttgtttgg caacctggcc tgtttcaacg accaatttct tgccagcaaa
    12541 aaccgtttca aatacttgtt ttgacatgaa ttgtctccta ttttttctga aatttttcct
    12601 gcgtattttc tacaaaagac aatcaaacaa gcttgtttca ctctcttttg cacaaaacca
    12661 cgcatacttc ttattttatc atatttgacg gaaaatgtgg ggaattgagg aaggaatttg
    12721 agggaaaatc taacctgcta ta
//
LOCUS       DASFQD010000067        12685 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.067, whole genome shotgun sequence.
ACCESSION   DASFQD010000067 DASFQD010000000
VERSION     DASFQD010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 12685)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12685)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12685
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.067"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            83..155
                     /locus_tag="U1021_001440"
     tRNA            83..155
                     /locus_tag="U1021_001440"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:116..118,aa:Thr,seq:ggt)
     gene            624..2351
                     /locus_tag="U1021_001441"
     CDS             624..2351
                     /locus_tag="U1021_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711975.1"
                     /translation="MFRLIFDYIKRHKWLYLLVAVTLIIYDATLLLPTQIIQRMVDIL
                     TKNELTQAILVQEMTLLLLVTVLNYATAFIWHLKLFQASVNFKFDMQQRAFKKLVTMR
                     TPFYEKFRSGDVMTRFSTDVDGLMEMVGYGLMIVVYAGGMLAFIIPTMFFIDWKISLV
                     ALLPMLFMTLCIFFIGRKQDKAIDANREAVAQLNNEVLEVIEGIRVTRAYSKKANQKA
                     QFQARTKQLAQGGDRITSLQSLYNPLATVCLGLSTIFVLLMGAQAVKAGQLTLGQVIA
                     LQLYVGSLLEPFWTLADFILVYQTGKTSFEKLQELIETGDDLEADGSKEIAELSSISF
                     KNYSFSYPQAERASLQDINWTLKAGQTVGIVGKTGSGKTTLVRQFLRQYPIGQGNFFI
                     NHQSVLDFKRSSIEEKIGYVPQEHILFSRSVGENISLGKVASSSEEIEQAIATAAFSQ
                     DLKRMTDGLDTMIGERGVSISGGQKQRISIARAFLREPDLLILDDSLSAVDARTERQI
                     IQNIQKERAGKTNVIVTHRLSAVNHADWVLVLDEGRIVEEGRPADLLAQRGWYYEQYQ
                     RQQSQEGGE"
     gene            2351..4090
                     /locus_tag="U1021_001442"
     CDS             2351..4090
                     /locus_tag="U1021_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711976.1"
                     /translation="MTILGFLLRQIRRVKWLFIVAVGFYLLASTMVRLAPLLIQQAID
                     GPITDLSKGLPFDEAVFLNQSVQYMGMIILGAIGFYLSMRLLMHCANRIAENLRNQAY
                     DVMQRLPISYFDDKPAGKIATRIVNDTETLRTQFYGTLVNAFNNIVRLLFTYGVLFYM
                     NRSLGWLMLLLIPLYIGIQFAYKKMTDKPMKDFYDARSDVNTQVNETMNGASLIQLFG
                     QEERIMKEFEVTADKMRRADNKIIWAQSLATWNLSGFLQNLVIAAILTVVGYQFLAGQ
                     DGVTAGKLFVYVNYIEGVFIALGALVQQFPNMLRSFETGKRLMALLEEELEDDCDRIL
                     EVEQGQVVFEHVNFSYEENRPVLKDITIRSEKGETVALVGHTGSGKSSIMNLLYRFYD
                     PQEGRVLIDGKNIRDYSRESLRSHMGIVLQDPYLFTGTIASNVSMNEEEADRTRIMQA
                     LEKVGAGPMLSRLEKGIDEPVVEKGAAFSSGERQLIAFARTLYSDPKILILDEATSHI
                     DTETEEIIQHAMEVVKEGRTTFIIAHRLSTIQNADQILVLDQGRIIEHGKHEELVARG
                     GVYAQMHEIQAKV"
     gene            4144..4854
                     /locus_tag="U1021_001443"
     CDS             4144..4854
                     /locus_tag="U1021_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4711977.1"
                     /translation="MKALIFDVDDTLYDQIQPFERALERHIEVAREQIEPLYLSFRRY
                     ADEVFEATAIGKMSLKDSHIYRMKHALADFGYQVSDATALAIQIDYDYFQGQIELSPV
                     FPEIFSWCQAQGIAMGIITNGPYRHQLRKIRTMGLVNWFELEHVLISGQVGITKPNPA
                     IFQLMEERLGMSGEDICYLGDSFENDIIGAKTAGWQAVWFNHRKRSEPESSFQADYMI
                     DEWFNLDSLIKNIIKPIG"
     gene            5444..6937
                     /gene="sly"
                     /locus_tag="U1021_001444"
     CDS             5444..6937
                     /gene="sly"
                     /locus_tag="U1021_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_095889394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cholesterol-dependent cytolysin suilysin"
                     /protein_id="HEM4711978.1"
                     /translation="MRKSSHLILSSIVSLALVGVTPLSVLADSKQDINQYFQSLTYEP
                     QEILTNEGEYIDNPPATTGMLENGRFVVLRREKKNITNNSADIAVIDAKAANIYPGAL
                     LRADQNLLDNNPTLISIARGDLTLSLNLPGLANGDSHTVVNSPTRSTVRTGVNNLLSK
                     WNNTYAGEYGNTQAELQYDETMAYSMSQLKTKFGTSFEKIAVPLDINFDAVNSGEKQV
                     QIVNFKQIYYTVSVDEPESPSKLFAEGTTVEDLKRNGITDEVPPVYVSSVSYGRSMFI
                     KLETSSRSTQVQAAFKAAIKGVDISGNAEYQDILKNTSFSAYIFGGDAGSAATVVSGN
                     IETLKKIIEEGARYGKLNPGVPISYSTNFVKDNRPAQILSNSEYIETTSTVHNSSALT
                     LDHSGAYVAKYNITWEEVSYNEAGEEVWEPKAWDKNGVNLTSHWSETIQIPGNARNLH
                     VNIQECTGLAWEWWRTVYDKDLPLVGQRKITIWGTTLYPQYADEVIE"
     gene            7248..7949
                     /locus_tag="U1021_001445"
     CDS             7248..7949
                     /locus_tag="U1021_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HEM4711979.1"
                     /translation="MGTISKTDLKQQIKDGIIVSCQALPGEPLYREEGGIMPLLVKAA
                     QEAGAVGIRANSVRDIKEIKEVTTLPIIGIIKRDYPPQEPFITATMREVDELAALDIE
                     VIALDCTKRERYDGLDIVDFIKQIKEKYPEQLFMADISTFEEGLTAYEAGIDFIGTTL
                     SGYTSYSRQEEGTDIELVDRLCRAGIDVIAEGKIHYPDQVKIIHDLGVAGIVVGGAIT
                     RPKEIAERFISALHK"
     gene            7977..9485
                     /locus_tag="U1021_001446"
     CDS             7977..9485
                     /locus_tag="U1021_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HEM4711980.1"
                     /translation="MNFKKFSQLGQAFMLPISILPVAGLLLGIGGALSNSNAVAQFPV
                     LDQAWLQAVFTIMSTAGSAVFANLALIFAVGVAVGLADADKGTAGLSAGVAYLVYTAT
                     ISGFLTLFADKGASIDTGVLGALAIGITVATLHNKYRKIELPAFLGFFGGSRFIPIIS
                     SFAAIAIGSIFYIIWPPIQNLLVDFGKAIAEMGSFGTFLYGFGLRLTGAFGLHHTIYP
                     MFWYTSLGGSEVVAGETIQGAQNIFFAQLADANHTGLFTYGTRFFAGRFATMIFGLPA
                     SCLAMYHAIPKENRKKVGSFYSSSALTSLLTGITEPIEFSFLFVAPWLYVVHAFLDGL
                     SFLVADLLQIRIGNSFSGGLIDYLIFGVFQGNDKTNWIYVIPVGLLWAAVYYLVFKFL
                     VTKFHVLVPGMESSDQASHSEKVLSNGSSLRDNAIAIIDALGGADNIENVTACATRLR
                     VSLRNSGLVDKGVIQSIGATAVLDVKGGIQAIFGGKAILYSQEINQILGLEE"
     gene            complement(9589..10401)
                     /locus_tag="U1021_001447"
     CDS             complement(9589..10401)
                     /locus_tag="U1021_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM4711981.1"
                     /translation="MLKTPKHITAIIESHLDQMTRLEKQIASYFTQLDPSSTDLSQEN
                     TIQQLHISPSALTRFAKKCGFSGYREFVFAFQNNQQYLDKHFEKLQRSLTKKVLVDYE
                     EILTATNKLVDEEKLEEIAKLIDSSKRVYFYGIGSSGLVAMEIKSRFMRLGVVCDAIT
                     DKNNLIWTTTILDPSCLVIGLSLSGQTEEVMEHLLLASQKGIPTALLTTKSFQQAPYD
                     QIIPVASVRHLNYGNRISPQIPLLIMLDIIYAYFLAIDKEKKENIFKQTIRE"
     gene            10501..10998
                     /gene="ybeY"
                     /locus_tag="U1021_001448"
     CDS             10501..10998
                     /gene="ybeY"
                     /locus_tag="U1021_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018380869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEM4711982.1"
                     /translation="MYIEMIDETGQVSSQMQEQITELLQFAAEKIGKQNKEMAVTFVD
                     NKRVHEVNLEYRGIDRPTDVVSLEYKPESEIVFDEEDLLDNPELAEMMEDFDAYIGEL
                     YISIDKAREQAEDYGHSYEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEILTAY
                     GLTRE"
     gene            10979..11380
                     /locus_tag="U1021_001449"
     CDS             10979..11380
                     /locus_tag="U1021_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEM4711983.1"
                     /translation="MDLQENNSKNRWKNRELIASLEFAVTGLLTAFKEERNMKKHLAS
                     AILVVLAGLIFQVSVTEWLFLLLSISLVIAFEIVNSAIENVVDLASDYHFSMLAKNAK
                     DMAAGAVLFVSGFALLTGLIIFVPKIWDFIF"
     gene            11398..12297
                     /gene="era"
                     /locus_tag="U1021_001450"
     CDS             11398..12297
                     /gene="era"
                     /locus_tag="U1021_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEM4711984.1"
                     /translation="MTFKSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKI
                     MGIYTTEEEQIVFIDTPGIHKPKTALGDFMVESAYSTLREVDTVLFMVPADEKRGKGD
                     DMIMERLKQAKVPVILVVNKIDKVHPDQLLEQIDDFRQQMDFKEIVPISATQGNNVNR
                     LMEILKENLDEGFQYFPADQITDHPERFLVSEMIREKVLHLTREEIPHSVAVVIESMK
                     RDEFTDKVHIRATIMVERDSQKGIIIGKQGAMLKKIGSMARRDIELMLGDKVFLETWV
                     KVKKNWRDKKLDLADFGYNEKEY"
BASE COUNT         3775 a         2172 c         2908 g         3830 t
ORIGIN      
        1 gcttattttc tctttatttt tctcaatatt tccaaaaaat ccattgactt tttttagaga
       61 tatgatatac tagtcaagta ctgctggttt agctcagtcg gtagagcgca tccatggtaa
      121 ggatgaggtc gccggttcaa tcccggcaac tagcatcgaa tactatcgaa aggccttgtt
      181 tgacaaggtt ttttcttatt tttgtcctaa attcgccctt attgtcaaaa atcccttgac
      241 atgaatattt attatggtag aatagggctt agaaatatga aaggagtaaa acaaatgaac
      301 aagcaacttg tcattcagca agctattttt tatcatacac tcctttctaa gcaggaaaac
      361 aaagctcatt gatgaacttt tgtcgttttt cgtgggctat attttgaaac attgagacaa
      421 tcaagcactg tgggtatggt gtgataaaaa ttgtcgacta tgttcaagag ctggtctatt
      481 tttgtggact tacgcaagcc taggtggagt gagatgcttc cctgggcttt tttgtgcgct
      541 tagcttagaa aagtaaggtc tatcaattgt agcttattga ataaagtggc aaatgatagg
      601 ttatggattt gtaaaggaga tatatgtttc gattaatttt tgactatatc aagcgtcata
      661 agtggctcta tctattggtt gctgtgacct tgattattta tgacgccaca cttttgctac
      721 caacgcaaat cattcagcgg atggtcgata tactaaccaa gaatgaatta acacaggcca
      781 tattggttca ggagatgacc ttattgttat tggtaacagt gctgaactat gcaacagcct
      841 tcatttggca tctgaaatta tttcaggcct ctgtcaattt caagtttgat atgcagcaac
      901 gtgcctttaa aaaattagtg accatgcgga ctccatttta tgaaaaattc cgctcaggag
      961 atgtcatgac tcgtttttca acggatgtgg atggcctgat ggagatggtg ggttacggtc
     1021 ttatgattgt cgtctatgca ggcggtatgt tggcttttat cattcccacg atgttcttta
     1081 ttgattggaa aatttcgcta gtagctttac taccgatgct gttcatgaca ctatgtatat
     1141 tttttatcgg gagaaaacaa gataaggcga ttgacgccaa tagagaagct gtagcccagc
     1201 tcaataatga agttttggag gtcatcgaag gcattcgagt gactcgggct tatagtaaaa
     1261 aagcaaatca aaaggctcaa tttcaagctc gtaccaagca attggctcaa ggtggggatc
     1321 gcatcacttc cttgcaatca ttgtataatc cattagccac agtctgtttg ggattgtcta
     1381 ctattttcgt acttctcatg ggggcacaag ccgtgaaagc agggcaactg accttgggac
     1441 aagtaattgc ccttcaattg tatgtcggtt cgcttttaga gccgttttgg acactagcag
     1501 atttcatcct tgtttatcag actggtaaga catctttcga aaaactgcaa gagctgattg
     1561 agacgggtga tgatttggag gctgatggtt ctaaggaaat tgcagagctg tctagtattt
     1621 ccttcaaaaa ttatagcttt agttatccac aggcggaaag agccagccta caggatatca
     1681 attggacact gaaagcaggg caaactgtag gtatcgttgg gaaaactggt tcgggaaaaa
     1741 cgaccttggt tcgccaattc ttacgccagt atccgattgg tcagggaaat tttttcatca
     1801 atcatcaatc tgttttagac tttaaacgtt ctagtataga ggaaaaaatt ggctatgttc
     1861 cacaagaaca cattttgttt tcaaggtctg ttggagaaaa tatttccctg gggaaagtag
     1921 ctagtagctc tgaggagatt gaacaagcca ttgccacagc agcttttagt caagatttaa
     1981 aacggatgac tgatggtctt gataccatga ttggtgagcg tggtgtgtct atttctggcg
     2041 gtcagaaaca acggatttcc attgcccgtg ctttcctgcg agagccagat ttgctaattc
     2101 tagatgattc tttgtcggca gtggatgctc ggacagaacg ccagattatc caaaatattc
     2161 aaaaagaacg tgcaggcaaa accaatgtca tcgtgaccca tcgtctatct gctgtcaacc
     2221 atgcagattg ggtactagtc ttggatgagg ggcgtatcgt tgaggaaggg cgtccagctg
     2281 atttgcttgc ccaaagaggt tggtactatg aacaatacca acgacaacaa agccaggaag
     2341 gaggagagta atgactattt taggtttttt attaagacaa atccgtcgag tcaagtggct
     2401 atttatagta gctgtcggct tctatctatt ggcttcgacc atggttcgat tggctcctct
     2461 actgattcag caggcgattg atgggccgat tacggatttg agcaagggtt tgccttttga
     2521 tgaagctgtt ttcttaaacc agtcagttca atacatggga atgattattc tgggagctat
     2581 tggcttctac ctatctatgc gtttactcat gcattgcgcc aatcgtattg ctgaaaatct
     2641 acgtaatcaa gcctatgatg ttatgcaacg gttgcctatt tcttattttg atgataagcc
     2701 cgctggaaaa attgcaacta gaattgtcaa tgatacagaa actctgcgga cacaatttta
     2761 tgggacctta gttaatgcct ttaacaatat tgttcgtttg ctctttacat acggtgtcct
     2821 attttacatg aataggagtc ttggttggct gatgttactc ttgataccac tctatatcgg
     2881 tattcaattt gcttacaaga aaatgacaga caagccgatg aaggattttt atgatgcaag
     2941 gagtgacgtc aatacgcagg tgaatgagac catgaatggt gcaagtttga ttcaactttt
     3001 tggacaagaa gagcgcatca tgaaagaatt tgaagtgact gctgacaaga tgcgtcgggc
     3061 agataataag attatctggg cccagtctct tgccacgtgg aatctgagtg gttttcttca
     3121 aaatttggtc attgctgcga ttttaacggt agtcggctat caatttcttg cgggacagga
     3181 tggagttaca gctgggaaac tctttgttta tgtcaactat atcgaaggag tcttcattgc
     3241 tttgggagcg ctggttcaac agttcccaaa tatgcttcgc tcgtttgaaa caggtaagcg
     3301 tctaatggcc cttctagaag aagagctgga ggacgactgt gatcgtattt tggaagttga
     3361 acaagggcaa gtcgtgtttg aacatgtgaa ctttagctat gaagaaaaca gaccagtttt
     3421 gaaagatatt accattcggt cagaaaaagg agaaacagtt gctctggttg ggcatactgg
     3481 gtctggtaag tcttctatta tgaacctcct ctatcgtttc tatgatccac aggagggacg
     3541 tgtactgatt gatgggaaaa atatccgtga ttattctcgt gaaagcctgc gcagtcacat
     3601 ggggattgtt ttgcaagatc cctatctctt tacagggacg attgccagca atgtttccat
     3661 gaatgaagag gaagcagata gaacaagaat catgcaggcg ttagaaaaag ttggtgcagg
     3721 gcctatgcta tctcgcttag agaaagggat tgatgaaccg gttgttgaga agggggcggc
     3781 cttttcaagt ggggaacgtc agttgattgc ctttgcgcgg acactctact ctgatcctaa
     3841 aattctgata ttggatgaag caacttctca tattgatacg gagacggaag aaattatcca
     3901 acatgccatg gaagtggtga aagaaggtcg gacaaccttt atcattgccc accgactttc
     3961 taccattcaa aatgcagacc agattcttgt cttagatcaa ggtcgaatta ttgaacatgg
     4021 gaagcatgaa gaattggttg cacgtggtgg agtatatgct caaatgcatg agattcaagc
     4081 aaaggtgtaa taagcagtta aaaattccaa gctttggctg gaattttttg ctataattga
     4141 ctcatgaaag ccttaatttt tgatgtagat gatacgcttt atgatcagat tcaaccgttt
     4201 gaacgtgctt tggaaagaca cattgaagta gcaagggagc aaattgaacc actctacctt
     4261 tcctttcgca gatatgcgga tgaagtattt gaagcgacag caattggaaa gatgagtttg
     4321 aaagacagtc atatttatcg gatgaaacat gctttggcag attttgggta tcaggtgtct
     4381 gatgcaacag ccttagctat tcaaatagat tatgattatt ttcaagggca gatagagctc
     4441 agtccagtgt ttccagaaat attttcgtgg tgtcaggcgc aaggaattgc aatggggatt
     4501 attacgaatg gaccttatag acatcagttg agaaagatac gcacgatggg gttagttaat
     4561 tggtttgagc tagaacatgt ccttatttct ggacaagttg gtattacaaa gccaaatcct
     4621 gctatttttc aactaatgga agaacgtttg gggatgtcag gcgaagatat ttgttatcta
     4681 ggggattcgt ttgaaaatga catcatcggg gcaaaaacag ctggttggca agcggtctgg
     4741 tttaatcaca gaaaacggtc agagccagaa agttcctttc aggcagatta tatgattgac
     4801 gaatggttca atctggattc ccttatcaaa aacatcataa agccgattgg ataaataaaa
     4861 tggaataact ctcctaacaa gtttttaata ggattagaag ctagtcgggg gagtttttgt
     4921 gttcaaaaag aggaggtata gtcatttagt ttatctttaa ttacttcgac gcaagaggaa
     4981 actccgtttt cttatttcct acttcaaaca ctccactgga ttgtttgaac tcgctttgcc
     5041 gtactccacg aaagtgactt gcttcgcatg tcttatttcc aacctagaac agcctctagg
     5101 ctgttctagc aacctgcagc tcgttgcctt gtactaaaag cgaactaaac gactataata
     5161 tctagttatc attgcaaata tttataagtg ataatgtgta taaaaaactg acagaaattc
     5221 agaaaaaaca gaaaatgaat aggttgttta cagaaatgtt ccggaaattg ttggaaaaac
     5281 aacaaataga ggggcgtaat ctgttttttg tctgtttttc atctcaagga gtcttgacaa
     5341 cttatctaaa aaggtgcaga atgaactcgc aaacgtttgt ttttttaata ccatttttta
     5401 tgtctattca tttcattagt gaaaacatga aaggataaaa cttatgagaa aaagttcgca
     5461 cttgatttta agctcaatag tcagtttggc actcgtaggg gtcacaccat tgagtgttct
     5521 tgcagattcc aaacaagata ttaatcagta ttttcaaagc ttgacttacg agccacaaga
     5581 gattcttaca aatgagggag aatacattga taatccgcca gcaacaactg gtatgttaga
     5641 aaacggacgt tttgtggtac ttcgcagaga aaagaaaaat attacgaaca atagtgcaga
     5701 tattgctgtt attgatgcta aggctgcaaa tatttatcca ggtgctttat tgcgtgctga
     5761 ccaaaatctt ctggataata atccaacgct tatcagtatt gcgcggggag atctgacgct
     5821 tagtttgaat ttacctggtt tggccaatgg ggatagccac actgttgtaa attctccaac
     5881 aagaagtact gttcgaacag gggtgaataa ccttctgtct aaatggaata atacgtatgc
     5941 tggagagtat ggcaataccc aagcagagct tcaatatgat gaaacaatgg catacagtat
     6001 gtcacaatta aaaacgaagt tcggaacctc ttttgaaaaa attgcagtac cattagatat
     6061 caattttgat gccgtgaatt cgggtgaaaa acaggttcag attgttaact ttaaacaaat
     6121 ttattataca gttagtgttg atgaaccaga atctccaagc aagctttttg cagaagggac
     6181 aactgtagaa gatttgaaac gaaatgggat aacagatgag gtacctcctg tttatgtttc
     6241 cagcgtttct tatggacgct ctatgttcat caagttagaa actagcagta ggagtaccca
     6301 agttcaagcc gcatttaaag cagccatcaa aggcgttgat attagtggca atgctgagta
     6361 tcaagacatt ctgaaaaata cttcattctc tgcttatatt tttggtgggg atgcaggtag
     6421 cgcagctact gttgtgagcg gaaatattga aacactgaag aagattattg aagaaggtgc
     6481 aagatacgga aaactcaatc caggtgttcc gatttcgtat tcaaccaact ttgtcaaaga
     6541 caatagacct gctcagattt tgagcaattc agagtacata gaaacaactt caacagtcca
     6601 taatagcagt gcattgacat tggatcattc aggtgcttat gttgcgaaat acaacattac
     6661 ttgggaagaa gtatcttaca atgaagctgg agaagaagtt tgggaaccaa aagcttggga
     6721 taagaatggt gtaaatctga cctcacactg gagtgaaacc attcaaattc caggaaatgc
     6781 tcgcaatctt catgtcaata ttcaagaatg tacaggatta gcatgggagt ggtggagaac
     6841 agtttatgac aaagatttac cacttgttgg tcaacgtaaa ataaccatct ggggaacaac
     6901 gttataccca cagtatgcgg atgaggtgat agagtaatct ggcaatgtat tatactctct
     6961 tagccacaga ggctaggagc taaacactat tcgtcagaaa cttatcacaa gaaaatggta
     7021 ttaaaataag gattctattc aaattttggg tagaatcttt tatattttcc taaaaactac
     7081 ttttaggtat gagaactcgt tctgaaacta ttttcaggat tttttgtatt tctacaaaaa
     7141 tcgaaattac attctaaata aaaagaggtt attgaaaaaa taataatata ctatataata
     7201 aacaatgtaa gcgctatctc tagtatggag cagaaaggaa tgacataatg ggcactatta
     7261 gtaagacaga tttaaagcaa caaattaagg atggaattat cgtttcctgt caggctttgc
     7321 caggcgaacc tctgtatagg gaagaaggcg gtattatgcc tttactagtc aaggctgccc
     7381 aagaagcagg ggctgtcggt attcgggcca atagtgtacg agatattaag gagataaaag
     7441 aagtaactac tttaccaatt atcggaatta tcaagcgaga ctatcctcca caagagccct
     7501 ttattacggc tacgatgcga gaagtagacg agttagcagc tctagatatt gaagtcattg
     7561 ctcttgattg taccaagcgt gagcgttatg acggactcga tattgttgat ttcattaagc
     7621 aaatcaagga aaaatacccc gaacaacttt ttatggcaga tatttcaacc tttgaggaag
     7681 gattaactgc ttatgaagca ggcatcgatt tcattgggac aacactttcg gggtatacct
     7741 cctatagtag gcaggaggag ggaacagata ttgaattggt tgaccgcttg tgccgagcag
     7801 gtatcgatgt gatagcggaa ggaaaaatac actatcctga ccaagtaaaa attattcatg
     7861 atttaggtgt ggcaggaatt gttgtaggtg gagcgatcac acgtccaaag gaaattgcag
     7921 agcggtttat tagtgcttta cataaataat aaataggtta tagaaaggaa tggagtatga
     7981 attttaagaa gttttctcag ctagggcagg cctttatgct gccaatctca attttgcctg
     8041 ttgctggtct cttactggga attggaggcg ccttatcaaa tagtaatgct gtagcacaat
     8101 ttcctgtatt ggatcaagcg tggttgcaag ctgtattcac tatcatgagt acggcaggta
     8161 gtgcggtatt tgcgaattta gcattgattt ttgcagttgg tgttgctgta ggtttggcag
     8221 atgctgataa ggggactgct ggcctatctg ctggggttgc atacttggtt tatacggcta
     8281 ctattagtgg atttttaact ctttttgctg ataagggagc aagcattgat actggagttt
     8341 tgggcgcttt agcgattggt atcactgttg caactttaca caataaatat cgaaaaattg
     8401 aattaccagc ctttcttggc ttcttcgggg gctctcgttt tattccaatt atttcatcat
     8461 ttgcagcaat tgcgattggc tccatttttt atataatttg gccaccgatt cagaatttgt
     8521 tagttgattt tggtaaggca atagcagaga tgggaagttt tggaaccttc ttatatggtt
     8581 ttggattacg tttgacaggt gcatttggct tgcaccatac catctatcca atgttttggt
     8641 atacctcatt aggtggaagt gaagtggtag caggtgagac aatccaaggt gcgcaaaata
     8701 ttttctttgc tcaattagca gatgcgaatc acacaggctt atttacttat ggaactcgat
     8761 tttttgctgg tcgatttgca acgatgattt ttggtctacc agcatcttgt ttggctatgt
     8821 atcacgcaat tcctaaggaa aatcgtaaga aggttggcag tttttattca agtagtgcat
     8881 taacttccct attgacagga attactgaac caatcgaatt ttctttcttg tttgttgctc
     8941 catggctata tgttgttcac gcatttttag atggactatc attcttagtg gcggatctcc
     9001 tgcaaattcg tattgggaac tcattttctg gtgggcttat tgattacttg atttttggtg
     9061 ttttccaagg aaatgacaaa accaattgga tttacgtgat tcctgttggc ttgctttggg
     9121 cagcagttta ttatctagtt ttcaaatttt tagtaaccaa atttcacgtg ctagttcctg
     9181 gtatggaaag cagtgaccaa gcatcacatt ctgaaaaagt tttatcaaac ggttctagtc
     9241 ttcgtgataa tgcaattgct atcatcgatg ctcttggtgg agcagataat attgagaatg
     9301 tgactgcctg tgcaactcga ttaagagtat cgctcagaaa tagtggtctt gtggataagg
     9361 gagttattca gtctataggt gcaacggctg ttttggatgt aaaaggagga atacaggcta
     9421 ttttcggagg taaggctatt ctgtatagcc aagaaatcaa tcaaattctt ggtcttgaag
     9481 aatagagtta tatttaagcg aattaaaagc attcaaactg tacctatcgg gtatttttga
     9541 atgctttttg ttttattaag attgttgtga aatagaaaga cggatgaatt attctctaat
     9601 agtttgcttg aaaatattct cttttttctc cttgtcaata gccaaaaaat aggcgtagat
     9661 aatatctagc atgatgagca gggggatttg gggtgagata cgattgccgt aattgaggtg
     9721 gcggacagag gcgactggaa tgatttggtc ataaggtgct tgttgaaaag actttgttgt
     9781 caagagggca gttggtattc ctttttgact cgcaagaagc aagtgttcca tgacttcttc
     9841 ggtttgtcca gacagagaaa gaccgataac caggcaacta gggtctaaaa tagtagttgt
     9901 ccaaataaga ttgtttttat cagtaattgc atcacagacg actcccagtc gcataaagcg
     9961 ggatttgatt tccattgcaa ccaaaccaga actgccgatt ccataaaaat agacacgctt
    10021 gctactgtca atcagtttgg caatttcttc caatttttct tcatcaacga gtttattggt
    10081 agcagttagg atttcctcat agtctaccaa gacttttttt gttaggctcc tctgtaattt
    10141 ttcaaaatgt ttatccaagt attgttggtt attctgaaag gcaaagacaa attctcgata
    10201 accggaaaat ccacattttt tggcaaaacg ggtaagagca gatggagaaa tgtggagttg
    10261 ctgtatagtg ttttcttggc tgagatcggt gctagatggg tctaactgag taaaataact
    10321 ggcaatctgc ttttcaagtc tagtcatctg atccagatga gactcaatga tggcagtgat
    10381 gtgtttcggt gtttttaaca ttttccactc ctctgatagc ttctgaggat attataccac
    10441 taaaaacccc tcattgatag gttttatgat ataatggaaa cgtaaaagga atgtaagatt
    10501 atgtatattg aaatgattga tgaaacaggg caggtttctt ctcaaatgca ggagcagatt
    10561 acggaattgc tccagtttgc tgccgaaaaa attggcaagc agaataagga aatggctgtg
    10621 acctttgtgg acaataagcg tgtccatgag gtgaacttgg agtaccgagg aattgaccgt
    10681 ccgacagatg ttgtcagttt agaatataag ccagagtcgg agattgtctt tgatgaggaa
    10741 gacttactgg acaatcctga attggctgaa atgatggaag atttcgatgc ctatattggt
    10801 gaattgtata tttctatcga taaggcgcgt gagcaagctg aagattatgg tcatagctac
    10861 gagcgcgaaa tgggcttttt agctgtacac ggttttctgc atattaatgg ctatgatcat
    10921 tatacgccag aagaagaagc agaaatgttt ggtttacaag aagaaatttt gacggcctat
    10981 ggacttacaa gagaataatt caaaaaatcg ctggaaaaac cgagaattga ttgctagtct
    11041 agaatttgca gtaacaggtt tgttgacggc tttcaaggaa gaacgcaata tgaagaagca
    11101 ccttgcttca gctattcttg tagtgcttgc gggacttatt ttccaagtat ctgtgacaga
    11161 atggctcttc ctcttgctca gtattagtct ggttatcgct tttgaaattg tgaattcggc
    11221 tattgaaaat gtggtggatt tggcgtcaga ctatcatttt tctatgttgg caaagaatgc
    11281 aaaagacatg gcagcagggg cagtcttgtt tgtgtcagga tttgccttgt tgacaggatt
    11341 gattatcttt gtgccgaaaa tttgggactt tattttttag aatagtaagg agaatacatg
    11401 acatttaagt caggttttgt ggcgatttta ggtcgtccaa acgttgggaa atcaaccttt
    11461 ctcaactatg taatggggca aaaaattgcc atcatgagcg acaaggctca aacaacccgt
    11521 aacaagatta tgggcattta tacgacagaa gaagagcaga ttgtcttcat tgacacacca
    11581 ggaatccaca agcctaagac agccttgggt gactttatgg tggaatctgc ctatagcacc
    11641 cttcgtgaag tggatacggt cctttttatg gtgccagccg atgaaaaacg aggcaaggga
    11701 gacgacatga ttatggaacg ccttaaacag gccaaggttc cagtcatttt agtggttaac
    11761 aagattgaca aggttcatcc agaccagctt ttggaacaga ttgatgattt ccggcaacag
    11821 atggacttca aggaaattgt gccaatttct gctacccaag ggaacaatgt caaccgactc
    11881 atggaaattc tcaaggaaaa cctagacgaa ggtttccaat attttccagc ggaccaaatc
    11941 actgaccacc cagaacgttt cttggtatct gagatgattc gggagaaggt tctacacctg
    12001 actcgtgagg aaattccgca ctctgttgcc gttgtcattg aatctatgaa acgcgatgaa
    12061 tttaccgaca aggtccatat ccgagcgacg attatggtgg agcgtgatag ccagaaaggc
    12121 atcatcatag gcaagcaagg agccatgcta aaaaaaatcg gctccatggc ccgtcgtgat
    12181 attgaactga tgctaggcga caaagtcttc ctcgaaacct gggtcaaagt caagaaaaac
    12241 tggcgtgaca aaaaactaga cctcgccgac tttggttata atgagaaaga gtattaaaaa
    12301 cgtccggggg acgtttttaa cccgagcttg gaaactagag agcgaggaag ttcgagggag
    12361 tgaaacagtc tgtgaataga ctgtttcagc tggtcacata gaaatgttaa agtggccatt
    12421 tgaaaaaacc gagcttgaaa actagagggc gaggtagttc gggggagtga aacaatctag
    12481 gaatagactg tttcagcagg tcacatagga atgtgaaagt gaccatttga aaacccgatc
    12541 ttagaaattg gaaggcgaga tagcctgggg ataggctgtc taagtcaatc acttagaaat
    12601 agttagcaga aaagccgaaa ggcttttact gcgttatgga gaaatctttt tagtaaacaa
    12661 gaaaggaaag ccgattaggc gttgt
//
LOCUS       DASFQD010000068        12610 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.068, whole genome shotgun sequence.
ACCESSION   DASFQD010000068 DASFQD010000000
VERSION     DASFQD010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 12610)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12610)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12610
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.068"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(6..1007)
                     /locus_tag="U1021_001451"
     CDS             complement(6..1007)
                     /locus_tag="U1021_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEM4711985.1"
                     /translation="MIRHHNYLKIFTFLLILLFVIFLLSLSIGYSNSSFSDLIDIMSG
                     RASSSTLLIIGRIRLPRIIASIIGGASLALAGLLLQTLTRNPLADSGILGINAGAGLV
                     VALFVGLSSKISPVLLSLMPLFAMMGGGLTIFLVYWIARKKLYGIHPARLIITGVGIS
                     SMLSGIMVSIISQLDDFKMEYIVQWLSGRVNGGDWKTIAIYTPLLLLVWMATFSRSRS
                     LNIMNLNDQTAMALGLHLQRERRITLVLATALASLSVILVGNITFVGLIAGHIVRKWL
                     ENDHRVIIPATMIIGSFILLLADTIGRVLLVGTGIPTGIIVSLIGAPYFLWLLKQEG"
     gene            complement(1004..2029)
                     /locus_tag="U1021_001452"
     CDS             complement(1004..2029)
                     /locus_tag="U1021_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEM4711986.1"
                     /translation="MNKLVSSRYPKTKPKNIWLVFFIICLSFIAGVYLSLRFGAVSYS
                     HQQLIETLTHPLTDSSAQDVIIDLRLPRMVAAILVGAAMAQAGAMMQGITRNPIADPG
                     LLGINAGAGLALIVAYALFGGLHYSQILLICLLGSCLAAGLVFGLAYQVQKGYNQLRL
                     ILSGAMVASLFSAIGQAITIYFDLSTAVIGWQAGGLVQVNWKMLAIIAPLIIIGLILA
                     QLFSHQLTILSLNETVAKNLGQRTLLMTLVLLGIVLLLSASAVALVGSLSFIGLIIPH
                     FIRMFTGKNYKLLLPLTAFAGASFLIWVDLVCRSINPPVETPISAVISIIGLPCFLWL
                     IRKEKHF"
     gene            complement(2043..2972)
                     /locus_tag="U1021_001453"
     CDS             complement(2043..2972)
                     /locus_tag="U1021_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4711987.1"
                     /translation="MKKFLAIFSLFVGLFFLTACSTSSSSTDVELSSMPKIEGITYHG
                     DIPKNPKKVVNFAYSYTGYLLQLGIDVSSYSLDLEKNSPVFGDKLKDVPQLTTADTEA
                     IAAQKPDVILVFAGDDNLETLKEIAPVIEITYGKSDYLKMLTDIGQIFGKEKEAQAWL
                     DQWDKKVATAKEELKGLIDTSSTFTVMDFFDKNIFLYGNNFGRGGELIYRALGFAAPA
                     KVQEDIINKEGWFGVSQEALPEYVGDYVLVNVNDKTKEAAASLKESDIWKNLPAVKNG
                     HVIEIDYNLFYFSDPMSLDLQIDAFVSEIQKLQ"
     gene            complement(2985..3770)
                     /locus_tag="U1021_001454"
     CDS             complement(2985..3770)
                     /locus_tag="U1021_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019774490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4711988.1"
                     /translation="MSSIQAENIQVSYDNRIIIDELSTSIPKGSITTIIGANGCGKST
                     LLKALTRIIPVQEGAIYLDGQAISQLPTKEVAKKLALLPQVLEATEGISVYELVSYGR
                     FPHQNGLGHLTDQDREKINWALEVTQTAPYARLPVDDLSGGQRQRVWIAMALAQDTDT
                     IFLDEPTTYLDLNHQLEVLELLKELNQSRQKTIVMVLHDVNLSARFSDYMIAMKEGDI
                     RYHGSVSNMMTTEILRDIFSIEPQLMQVAGQDYPILLTYDLKK"
     gene            complement(4124..5569)
                     /locus_tag="U1021_001455"
     CDS             complement(4124..5569)
                     /locus_tag="U1021_001455"
                     /EC_number="6.3.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019792455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-
                     lysine ligase"
                     /protein_id="HEM4711989.1"
                     /translation="MIKIERVVDILKADANFRHIKQNDQTDSTWTDVQFDALSYDSRT
                     VSPSTLFFAKGLAFKKEFLEKAIEAGLAFYVSEIDYEVSIPAIIVHDIKQAMSLIAME
                     FHGHPQKQLKLLAFTGTKGKTTAAYFAFNILKQSHKPAMLSTMNTTLDGKTFFKSTLT
                     TPESLDLFAMMAEAVKNGMSHLIMEVSSQAYLVKRVYGLTFDVGVFLNISPDHIGPIE
                     HPTFEDYFYHKRRLMDNSRAVIVNAGMDHFEVVKEQVSSKDHDFYGPTSENQISQSAG
                     FDFTATGKLAGHYDIQLIGGFNQENAIAAGLACLRLGASLEDIHTGIAQTNVPGRMEV
                     LTQQNGAKVFVDYAHNGDSVKKLIDVVLEHQTGKVFLILGAPGNKGESRRKDFGLLLN
                     DYPQIEVILTADDPNREDPAAIAEQIRAHMTRPSNFILDREEAIRTAMSQTTSSQDAV
                     IIAGKGADAYQIVNGEKAAYDGDLEVAKQYL"
     gene            5716..6462
                     /locus_tag="U1021_001456"
     CDS             5716..6462
                     /locus_tag="U1021_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEM4711990.1"
                     /translation="MFYSYLRTLLTFLLWAINGNIHYHDREKILPQEENYILIAPHKT
                     FWDPVFLGYAAAPKQFIFMAKKELFKDRGFGWWISKCGAFPIDRDNPGMAAIKYPVNM
                     LKKSDRSLVMFPSGSRHSSELKGGVAVIAKSAKVKLMPATYVGPMTIKGLLAGERIDV
                     AFGNPIDVSDIKRMDDAGTAEVTSRIEAEFKRLDDHAASFQTKKKPNILTYIYRIPVL
                     LLVALILGLTYSFSYIASFFWQPSTQLDKK"
     gene            6529..7191
                     /locus_tag="U1021_001457"
     CDS             6529..7191
                     /locus_tag="U1021_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEM4711991.1"
                     /translation="MDTIKTYIEMLKEYKWQIALPAVAGLLMATFLIFSQPAKSDQTG
                     LTDFPQTEQTSSGQEQTEETSTEASEEPIQLVIDIKGAVVKPGLYTLEADARVNDAVE
                     AAGGLTSQADPKSINLAQKLSDEAVVYVASKDENISVVASTTASSAMSQEEKSTSLVN
                     LNTATEADLQTISGIGAKRAADIIAYREANGGFKSVDDLNNVSGIGDKTMESIRPYVT
                     VD"
     gene            7175..9412
                     /locus_tag="U1021_001458"
     CDS             7175..9412
                     /locus_tag="U1021_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HEM4711992.1"
                     /translation="MSRSIKLPCQPIHLAVLAVAAYFAVHSFSLLTMGLLSLVLAVFG
                     VRQGKTVFLKTLLLLALCGLFFGYQKVQWERADQSAPEQVTTVQVIPDTIEVNGDSLS
                     FRGRSDGQTYQVFYKLASQEEQTYFQELTDLVQLEVEAEVSLPAGQRNFNGFDYQAYL
                     KTQGIYRTVKISAIKKIVPIQSWNVFDLLSSWRRQALVYIKTNFPAPMSHYMTGLLFG
                     ELDSEFDQMSDLYSSLGIIHLFALSGMQVGFFIDKFRWILLRVGLTKETVDKLQIPFS
                     LVYAGLTGFSVSVVRSLVQKILGNLGLRKLDNFAVTVFVCLLILPRFLLTAGGILTFT
                     YAFLLTVFDFEDLGQVKKAAVESLSISLGILPVLMTYFYAFQPLSILLTFVFSFVFDV
                     LLLPGLSVIFLLSTLVKITWVNGFFVLMEKIIVWVADLGFRPWILGKPSGVILVLLLV
                     SLFLLYDFHRKKKWLLGLSMVLALLFFITKHPLENEVTVVDIGQGDSIFLRDMRGRTV
                     LIDVGGRVDFAAKEEWQERSSQANAERTLIPYLHSRGVDRIDSLVLTHTDTDHVGDVL
                     EVAKQVQIGRIYVSPGSLTVPDFVATLKEINVPVHVVAVGDRLPIFDFYLEVLYPDGT
                     GDGGNNDSVVLYGRLLETNFLFTGDLEQGELDLIEAYPNLPVDVLKAGHHGSKGSSYP
                     EFLDHIGAKIALVSAGENNRYKHPHQETLERFDSRNIQVYRTDQQGAIRFRGWREWRI
                     ETVRR"
     gene            9726..10382
                     /locus_tag="U1021_001459"
     CDS             9726..10382
                     /locus_tag="U1021_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEM4711993.1"
                     /translation="MSVKDFMTRKVVYISPDTTIAHAADIMREQDLHRLPVIENDKLV
                     GLVTEGTIAEASPSKATSLSIYEMNYLLNKTKVKDVMIKNVITVSGYASLEDAAYLMY
                     KNKVGILPVVDNGQLYGVITDRDIFAAFLHVSGYGEEGVRARFLVENKAGELEKIIRL
                     VADKDYNIVSTVQLATKSGKVVIEVQIDGKVDVEEVRTLFEGAGIQVDSLVPTVAKNI
                     "
     gene            10476..11303
                     /locus_tag="U1021_001460"
     CDS             10476..11303
                     /locus_tag="U1021_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4711994.1"
                     /translation="MGHKYKKYKKYGKNNSGLVALLVLLAIGFVMSFWYILLPTGLLI
                     GYFYKREAIQRFLNRDSIKRSQVLALSIRSGYEKHQELFVEKGEDKVVLQLRNRLLGQ
                     LFELDQLYQKVGKYLNGYESKEVVDTLQLKYHLKLPEAKTEKNTDTQVSTGGNAVMDE
                     QGMIADLAPEILETYCNIQRDNLVILEKLEKATDKREELTAIHEANMNRFNDILQGYL
                     KIKKSPKDYFNAEERLVQAKSAMEMFDKDLDDTIKQFNEAGMKDFEVSLRMMKREEE"
     gene            11309..12580
                     /locus_tag="U1021_001461"
     CDS             11309..12580
                     /locus_tag="U1021_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic anion resistance protein"
                     /protein_id="HEM4711995.1"
                     /translation="MSGFNFDIDQIANNSLSTKDKTTELIQATPTGDNSKVSFLAQLT
                     PEQQTGIRAKAPQLVDNFLANQNALLDFGKEAVEEVNATVNHILSEQKKIEIPQVDEL
                     LANTNRELNGFVAKYKDISTTAELEKKPGFFQRLFKQTKNDLQEFYFDSQTIEKKMDS
                     MAASVVKQEEVLARNIVSAELLIENNTKSIENLVGVIAFIEATGQEAAERAKLAQENL
                     ATLVPTTVDYQVASEKLARVTEVANILEQQHSEYMSRLYVAWTTTPQMRNLVKVSSDM
                     KQRLGMLRRNTIPTMKLSIAQLGILQQSIKSSQTADAIVNANNAALQMLADTSKEAIP
                     MMERTAQNPTLSVASVTKLAESLVAQNNGIIAAIDEGRQKRRELDAAIVRSAETINDS
                     VKLRDQKIIAALLEQGKEAQSEAEQPLETNQ"
BASE COUNT         3563 a         2555 c         2932 g         3560 t
ORIGIN      
        1 gtcatctagc cttcttgctt tagtaaccac agaaaatagg gagcgccgat aagtgagacg
       61 atgatgccgg ttgggatgcc tgttccgaca agtagtaccc gtcctatggt atccgctaga
      121 agtagaatga agcttcctat tatcatagta gctggaatga tgacacgatg gtcattttct
      181 aaccatttgc gcacaatgtg accagcaatg agaccaacga aggtgatatt accaactaaa
      241 atgacactaa gagaggctag ggcggtagct aataccaagg taatccgcct ttcacgctgt
      301 aagtggagtc ccaaagccat ggctgtctgg tcgtttagat tcataatatt gagtgagcga
      361 cttcgactaa atgttgccat ccacaccaat agaagaagag gagtatagat tgcgatagtt
      421 ttccaatctc caccatttac tcgaccgctg agccactgga caatgtattc catcttaaag
      481 tcatctaatt ggctgatgat gctgaccatg ataccagaca gcatgctcga aattccaact
      541 cccgtgataa ttaagcgtgc aggatggatg ccgtacagct tcttacgtgc aatccagtaa
      601 actagaaaaa tggttaatcc accgcccatc atagcaaata gaggcatgag actcaataag
      661 acagggctga tttttgaaga gagaccgaca aatagtgcca caacaagacc agctcctgcg
      721 ttgattccta atattccaga atctgccaga ggattgcggg tcaaagtttg tagcaacaaa
      781 cccgccaaag ccagagaagc ccctccgata atggaggcga ttattctagg taagcgaatt
      841 cgcccaatga tcagtagagt cgatgaactg gcacgcccac tcatgatgtc gatgagatct
      901 gaaaaggatg aattgctata gccgatagat aaggaaagta ggaaaatgac aaataaaagg
      961 atcagcagga atgtgaatat ttttagatag ttgtgatgtc ttatcaaaag tgtttctcct
     1021 ttctaatcaa ccataggaag caagggagac caatgatact gatgactgcg ctaatgggag
     1081 tttcaacagg tggattgata gaacggcaaa ccaaatctac ccagatgagg aaactagccc
     1141 ctgcaaaggc agttaatggc aagagtagct tgtaattttt ccctgtaaac atgcggataa
     1201 agtgaggaat aatgagcccg ataaaagaaa gcgagcccac aagagctacc gcagaagctg
     1261 agagtagaag gacaattccc aacaaaacca aggtcatcag tagggttcgt tgacctagat
     1321 ttttagcaac ggtttcgttg agactcagga tggtcagctg atgcgaaaag agttgagcaa
     1381 ggatgaggcc aatgatgata agaggagcga tgatggccag catcttccag tttacctgta
     1441 ccaatccccc tgcttgccag ccaatcactg cagttgataa atcaaagtag atagtaatag
     1501 cctgaccaat agcagaaaat agacttgcta ccatggcgcc agataaaatt aaacgtagtt
     1561 gattgtagcc tttttgcacc tgataagcta gaccaaagac tagaccggct gccagacagg
     1621 agcccagtaa acatattaat aaaatttgac tgtagtgcaa accaccgaac agagcatagg
     1681 caacaatgag agcaagtcct gctccagcat tgattcctaa taagccagga tcggcgatcg
     1741 gattgcgtgt aattccttgc atcattgccc cagcttgggc catggcagct cccaccaaga
     1801 tggcggctac cattctaggc aagcgcaaat cgatgataac atcctgagcg gaagaatctg
     1861 tcagtggatg cgttagggtt tctatcagtt gttggtggct ataagaaaca gctccaaagc
     1921 gtaaactaag atagactcca gctatgaaag aaagacagat gatgaaaaaa acaagccaaa
     1981 tattctttgg ctttgttttg ggataacgag aacttactag tttgttcata tatccagtcc
     2041 ttttactgaa gtttttgaat ttctgagaca aaggcgtcaa tttgtaaatc taaagacatc
     2101 ggatcggaga agtagaagag gttatagtct atctcgatga cgtgaccatt ctttacagca
     2161 ggtagatttt tccaaatatc actttctttg agagaggcag ctgcttcttt tgttttatca
     2221 ttgacgttaa caaggacata gtcgccaaca tattctggaa gagcttcttg agatacccca
     2281 aaccagcctt ctttattgat gatgtcttct tgaacctttg caggagcggc aaaaccgaga
     2341 gcgcgataga ttaattctcc accacgacca aagttattac cataaaggaa gatattctta
     2401 tcgaagaagt ccatgacggt aaatgttgaa cttgtatcaa tcaatccttt caattcctct
     2461 ttcgcagtag caactttctt atcccattga tctaaccagg cttgtgcttc cttttctttt
     2521 ccaaaaatct gaccaatatc tgtcagcatt ttcaagtagt cactctttcc ataagtgatt
     2581 tcaataactg gagcaatttc tttcagtgtt tctaagttat catcaccagc aaatactaga
     2641 atgacatctg gcttttgtgc ggcaatcgct tctgtatctg ccgttgtcaa ttgtggaaca
     2701 tcctttagtt tgtctccaaa gacgggacta tttttctcta aatctagact atagctagat
     2761 acatcaattc ctaattgtaa aagatagcct gtgtaagagt aagcaaagtt gacaactttt
     2821 ttaggatttt taggaatgtc accgtggtaa gtaattcctt caatctttgg catgctagac
     2881 aattctacgt ctgttgaaga ggaagaggta gaacaagctg ttaagaaaaa cagcccaaca
     2941 aataaactaa aaatagctaa aaactttttc attttttctc cttattattt ttttaaatcg
     3001 taagttagca aaatagggta gtcttgacca gcaacctgca ttaattgagg ttcaatgcta
     3061 aaaatgtccc tcagtatctc agttgtcatc atattggaca cagacccatg gtagcgaata
     3121 tctccctctt tcatggcaat catataatct gaaaatcgag ctgataaatt gacatcgtga
     3181 aggaccatca caatggtttt ctgtcggctt tgattcagtt cttttaaaag ttctaagact
     3241 tccaattgat gattgagatc aagataggtt gttggttcat ctaagaaaat ggtatccgta
     3301 tcttgggcaa gtgccatcgc aatccaaaca cgttgcctct gaccacctga taaatcatca
     3361 actggtaacc tagcgtaggg agcggtctgg gtgacttcca aggcccagtt gattttctct
     3421 ctatcctgat cagtgagatg ccccagccca ttttgatgcg gaaagcgacc ataggagacc
     3481 agttcataaa cggaaatccc ttctgtcgct tctaagacct gagggagcag ggccaatttt
     3541 tttgcaactt ctttggttgg tagttgtgaa atggcttgtc catctaaata gatagcccct
     3601 tcttgaacag ggataatcct tgtcaacgcc ttaagcaagg tcgattttcc acagccattg
     3661 gcaccaatga tcgtcgttat acttcctttt ggaatacttg ttgataattc atcaataata
     3721 atccgattgt cgtaagagac ttggatgttt tccgcttgaa tcgaagacac aaactcctcc
     3781 ttaccagaat atgattcatt aataatttgt tccgaccagt attatatcaa aaaaatttac
     3841 caaaacaaag agttttctga aaattttaat ttaatgagaa tcgttataaa aaagggagtg
     3901 ggaaagaact catccattca tagaagagtt cgttttccca cccccgcaca gttgattagg
     3961 ttagatttgg agtgtaaaac acgaattgct gagatttgct tcgcaaatac tatctccaac
     4021 ctttaacagt ccactggact gttaaagcca atcaaccact gcgctgagat gttgacacta
     4081 actttgagaa gcggtgctgg gctttttgcc cagcctccgt atattacaaa tattgttttg
     4141 ctacttccaa atcaccgtca taggcggcct tttcgccgtt gacaatctgg taggcatcag
     4201 ctccctttcc agcgataatg acagcatctt gagaagaagt cgtctgactc atggctgtgc
     4261 gaatggcttc ttcccggtcc aagataaagt tgcttggacg ggtcatgtgg gcacggattt
     4321 gttcagcaat agcagctgga tcttcacggt tgggatcatc agctgtcaga atgacctcaa
     4381 tctgcggata gtcgttgagc agcagtccga agtccttgcg gcgactttct cctttgttac
     4441 caggagcacc caaaatcaaa aacaccttgc cagtctggtg ctctaagacg acatcaatca
     4501 gcttcttgac actatcgccg ttgtgggcgt aatcgacaaa aaccttggcc ccgttttgct
     4561 gggtcaggac ttccatacgg ccaggaacat tggtttgggc aatccctgtg tgaatatctt
     4621 ccagacttgc tcccaaacgg agacaggcca gtcctgctgc gatggcattt tcttggttga
     4681 agccaccgat cagctggatg tcgtaatggc cagccaattt gccagtcgct gtgaagtcaa
     4741 aacctgctga ctgactaatc tggttttcag aagtcggccc ataaaagtca tggtctttgg
     4801 agctgacttg ctctttcacg acttcaaaat ggtccattcc agcattgaca ataaccgctc
     4861 tgctattgtc catcaaccgc cgcttatggt agaagtagtc ctcaaaggtc ggatgctcaa
     4921 tggggccgat gtggtcgggg ctgatgttga ggaagacgcc gacatcaaag gtcagcccgt
     4981 aaacccgctt gaccagatag gcctggctgg acacctccat aattaagtgg ctcatgccgt
     5041 ttttgaccgc ctccgccatc atggcaaaga ggtccaggct ttcaggcgtg gtcagggtag
     5101 acttgaagaa ggtcttaccg tccagtgtgg tgttcatggt cgaaagcatg gcaggcttgt
     5161 ggctctgttt gagaatgtta aaagcaaaat aagccgccgt tgtcttaccc ttggtgccgg
     5221 tgaaggctag gagtttgagc tgtttctggg gatgaccatg aaactccatg gcaatcaggc
     5281 tcatggcttg cttgatgtca tggacgatga tagcaggaat gctgacttcg tagtcgattt
     5341 cagacacgta aaaagccagc ccagcctcga tagccttttc cagaaattcc ttcttaaagg
     5401 ccaaaccctt ggcaaaaaag agggtcgatg ggctaacagt ccggctgtca taactgagag
     5461 cgtcaaattg gacatctgtc catgtgctgt cagtctggtc attctgtttg atatggcgga
     5521 agttagcatc cgcttttaaa atgtctacta cacgttcaat ttttatcatg tttctattgt
     5581 aaacctatct agtggttttt acaagtcggg gctatgtaaa tagtgggtat tttgaccgta
     5641 aatttgaatg aatatgacat ttcgtcctga agcaaatttg tgctataata ggggggattg
     5701 aaaaaggaga agtttatgtt ttattcttat ctacgaacat tattaacatt cttgttgtgg
     5761 gccatcaatg gcaatattca ctatcatgat agggaaaaga tcttgccaca ggaggaaaat
     5821 tatatcctca tcgctccgca taaaaccttc tgggatccag tctttcttgg ctacgcagct
     5881 gctcccaagc agttcatctt tatggctaaa aaagaactct tcaaggaccg cggttttggc
     5941 tggtggattt caaaatgtgg agcctttcca attgaccgtg acaatcctgg catggcagcc
     6001 atcaagtatc cagttaacat gttgaaaaag agtgaccgtt cgctggtcat gtttccatct
     6061 ggaagtcgtc attcatctga gctaaaaggt ggtgtggcgg tcattgccaa gtcagcaaag
     6121 gtcaaactca tgccagctac ctatgtgggt cctatgacta tcaaagggct cttagctggt
     6181 gagcgaattg atgtggcttt tggaaatcct atcgatgttt cggacatcaa gcgtatggat
     6241 gatgcaggta cagcagaagt aactagccga attgaggctg agttcaaacg cttagatgac
     6301 catgcggcat ctttccaaac caagaaaaaa ccaaatatct tgacctatat ctaccgtatc
     6361 ccagttcttt tgctggttgc tcttatcttg ggattgacct attcctttag ctatatcgcc
     6421 agcttcttct ggcaaccaag tactcagttg gataaaaaat aagtaaatga aactcgcagc
     6481 ttgcgggttt tttgtatttt ttacgaacta tataggtgga ggtaatttat ggatacgatt
     6541 aaaacttata tagaaatgct taaagaatac aagtggcaaa ttgctctgcc cgcagtggct
     6601 ggcttgctaa tggcgacatt tttaatcttc agtcaaccag ccaagtctga ccagacgggt
     6661 ctgactgatt ttccccagac cgaacaaact tcaagcggtc aggagcagac ggaggaaacc
     6721 agtacagaag caagtgaaga gcctatccag ctggtcattg atatcaaagg agcagtagta
     6781 aaaccaggac tctacacttt agaagctgat gcgcgtgtta atgatgcagt tgaagcagct
     6841 ggcggcttga ccagtcaggc agaccccaag tctatcaatc tggctcagaa gctcagcgac
     6901 gaagcggtgg tctatgtggc cagcaaggat gaaaatatct cggtggttgc cagcacgact
     6961 gccagctctg ctatgtccca agaagaaaaa agcaccagtc tggtcaatct gaatacggcg
     7021 actgaggctg acctgcagac catttcgggt atcggtgcca agcgggcggc ggacattatc
     7081 gcctatcgtg aggccaacgg tggcttcaag tcggtggatg acctcaacaa tgtttcgggc
     7141 atcggcgaca agaccatgga aagcattcgg ccttatgtca cggtcgatta agctcccctg
     7201 ccagcccatc catctggcag tcttggcggt ggcggcctac tttgcagtcc actctttttc
     7261 cctgttgaca atgggcctac tcagtttggt gttagctgtc tttggtgttc ggcaaggtaa
     7321 gacggttttc ctcaaaacgc tgctgctttt agctctatgt ggcttgtttt tcggctacca
     7381 aaaggtccaa tgggagcggg cagaccagtc agccccagag caagtgacga ctgtgcaggt
     7441 cattccagat acgattgaag tcaacgggga cagcctgtct tttcgtggtc ggtctgacgg
     7501 acaaacctat caggttttct acaaattagc cagtcaggag gagcagactt attttcaaga
     7561 gctaacagat ttggtccagc ttgaagtgga agcagaggtc agcctgccag ctggtcagcg
     7621 gaatttcaac ggctttgact accaagccta tctgaaaacg cagggaattt atcggacagt
     7681 taagatttct gcgattaaga agattgtccc tatccagtct tggaatgttt ttgacttgct
     7741 atcaagctgg cggaggcagg ccttggtcta tatcaaaacc aattttccag cacccatgag
     7801 ccactacatg acagggctct tgtttgggga gttggatagt gagtttgacc agatgagtga
     7861 cctctattct agtctgggta tcattcatct ctttgccctg tctggcatgc aggttggatt
     7921 tttcatcgac aaatttcgtt ggattttgtt gcgtgtgggt ctgaccaagg aaactgtgga
     7981 taaattacaa attccctttt ctcttgtcta tgctggtttg acaggttttt ctgtgtcagt
     8041 ggtgcggtct ttggttcaga aaatattggg caatctgggc ttgcggaagt tggataactt
     8101 tgcggtgaca gtttttgtct gtctgctgat tctgccccga tttttactga cagcaggagg
     8161 tatattgacc tttacctatg ctttcttgct gacggttttt gattttgagg acttggggca
     8221 ggtcaaaaag gctgcggtgg agagcctcag tatttcactg ggaattttgc cggtgcttat
     8281 gacctatttc tatgcctttc agcctttgtc tatcctcttg acctttgtct tttcctttgt
     8341 ctttgatgtt ctgcttttgc caggattgtc ggtcattttt cttctatcga ccttggtcaa
     8401 gattacctgg gtcaacggat tttttgtctt gatggaaaaa atcattgtct gggtagcgga
     8461 tttgggcttt cggccttgga tattgggcaa gccgtctggg gtaattcttg ttcttttgct
     8521 ggtcagcctt ttcttgctct atgatttcca caggaaaaag aaatggctct taggactgag
     8581 catggtcctt gctctgctat ttttcataac caaacacccg ctggaaaacg aggtgacggt
     8641 ggtggacatc gggcaggggg acagcatctt tttgcgggat atgcgggggc ggacggttct
     8701 gattgatgtg ggtggtcggg ttgattttgc ggctaaggag gagtggcagg agcggtcttc
     8761 gcaggcaaat gcagagcgga ctttgattcc ctatctgcac agtcggggcg tggataggat
     8821 tgatagtcta gtgctgaccc acaccgacac agaccatgtg ggcgatgtgc tagaagtggc
     8881 taagcaggta caaattggtc gaatttacgt gtcgccggga agtctgacgg tgcctgactt
     8941 tgtagcgact ttgaaagaaa tcaatgtccc tgttcatgtg gtggcggtag gcgaccgctt
     9001 gccgattttt gacttctatc tggaagtcct ctatccagac gggacaggcg acggtggcaa
     9061 taatgactct gttgttcttt acggtcgctt gctggaaact aactttctct ttacaggaga
     9121 tttggagcaa ggggagttgg acttgataga agcctatccc aacctgcctg tcgatgtcct
     9181 taaagctggt caccacggct ccaaaggttc ttcctatcct gaatttctag accatatcgg
     9241 agccaagatt gccctggtat cagcaggaga aaataaccgc tacaagcatc cccatcaaga
     9301 aaccttggaa cgatttgata gtcggaatat ccaagtctat cgtaccgacc agcaaggagc
     9361 cattcgcttt cgaggttgga gggagtggag gattgaaacg gtgaggaggt aaaatgatag
     9421 atatggttct gtagtttcaa agtttacgtg ctcgctacct tatctggcta tattctgcac
     9481 tatgttacta cgccagcttc tgttaacgac ttcaaagagg ttgctgcctt attggaaaga
     9541 tgctaacaat ctgtgattgt agcagatttg ggctatctca gtcagcagtc ttgctcattc
     9601 cattgtattt caaatagtct atattttgaa tttaagaatt gattttcatt tcttttcatt
     9661 aaatattgaa atcgttttcg gatttgtggt ataataaagt atgatttacc aaaggaggaa
     9721 gtcctatgtc tgttaaagat tttatgaccc gtaaagttgt ttatatttca ccagatacaa
     9781 ccattgcaca cgctgcagat attatgcgtg aacaggattt gcaccgtcta cctgttattg
     9841 aaaatgataa gttggttggt ttggtcactg agggaacaat cgcagaagct agtccatcga
     9901 aggcaactag cctatctatt tacgagatga actacctttt gaataagact aaggtcaagg
     9961 atgtgatgat taagaatgtt atcacagtct caggttatgc tagtcttgaa gatgctgctt
    10021 atctcatgta taaaaacaaa gtggggattc ttccagttgt tgacaacggc caactatatg
    10081 gggtcattac tgatcgtgat atttttgcag cttttcttca tgtctcaggt tatggagaag
    10141 aaggagtacg cgctcggttc cttgttgaaa ataaggcagg ggagttagaa aaaattattc
    10201 gattggtggc agataaggat tataatattg tatctactgt gcaacttgct accaagtctg
    10261 gaaaagttgt catcgaagtg cagattgacg gaaaagttga tgttgaagaa gttcgaactc
    10321 ttttcgaagg tgcaggtatc caagtggata gcttggttcc gactgttgct aaaaatattt
    10381 aaaaaccgag atttctcggt ttttttcttt agctatcatt ctagtatttt aggggaatgt
    10441 gatataataa agtatatcac gtatgaggag gctctatggg gcacaaatat aaaaagtata
    10501 agaaatatgg taaaaataat tcaggacttg tggccctcct tgttttattg gcaatcggtt
    10561 ttgtcatgag tttctggtat atcttattgc ctactgggct cttaattggc tatttttaca
    10621 agagagaggc tatccagcgt tttttgaata gagattctat aaaacgctcg caggtattag
    10681 cgctatctat tcgttcgggc tatgaaaagc atcaagagct ctttgtggaa aagggtgagg
    10741 ataaggttgt gttacagttg agaaatagac tgttaggaca attatttgaa ttagatcagc
    10801 tctatcaaaa agttggaaaa tatctgaatg gatatgaaag taaagaagtt gtagatacct
    10861 tgcaactaaa atatcattta aaactgccag aagctaaaac agaaaaaaat actgacacac
    10921 aggtttctac tggtggtaat gctgtgatgg atgaacaagg catgatagcg gatttagctc
    10981 ctgaaattct agaaacctat tgtaatattc aaagagacaa tcttgttatt cttgaaaagc
    11041 tggaaaaggc gacagataag agggaagaat tgacagctat ccatgaggcc aatatgaatc
    11101 ggtttaacga tattttacaa ggttatttga aaatcaaaaa atcaccgaaa gattatttta
    11161 acgcagaaga acgattggtg caggcaaaat cagccatgga aatgtttgat aaggatttgg
    11221 atgataccat caaacaattt aacgaagcgg gtatgaaaga ttttgaagtc agtctgcgta
    11281 tgatgaaaag agaagaggaa tagagaagat gtcaggattt aatttcgata ttgatcagat
    11341 tgctaataat agtttatcaa ccaaagataa gacaacagag cttattcaag cgactccgac
    11401 tggagataat tcaaaagtgt ctttcttggc acagttgaca ccggaacaac aaacaggtat
    11461 tcgtgctaag gctccccaat tggtggataa tttcttagct aatcaaaatg ccctcttgga
    11521 ttttggtaag gaagcggtag aagaagtcaa tgccacggtc aatcacattt tgtcagaaca
    11581 gaagaagatt gaaattccac aggtggatga gcttttggcc aataccaacc gtgaattgaa
    11641 tggttttgtg gctaagtata aggacatttc cacaactgct gaattagaaa agaaaccagg
    11701 tttcttccaa cgcctgttca agcagaccaa aaatgatttg caggaatttt atttcgactc
    11761 gcagaccatt gaaaagaaaa tggatagcat ggcagccagt gtggtcaagc aggaagaggt
    11821 gttggcgcgc aatattgttt ctgcagagct tttgattgaa aataatacca agtctatcga
    11881 gaatttggtg ggggtcatcg cctttattga agcgactggt caggaagcgg cagagcgtgc
    11941 aaaattggca caagaaaacc tcgcaacttt agtaccgact acagtcgatt atcaagtagc
    12001 ttctgagaag ttggcacgtg taacagaggt tgctaatatc ctcgaacaac aacattctga
    12061 gtatatgagt cgcttgtatg ttgcgtggac aacgacaccg cagatgcgta atctggtcaa
    12121 ggtttcttcg gatatgaaac agcgccttgg gatgttacgt cgcaatacta ttccaacaat
    12181 gaaattgtcc attgcacagt tgggcatctt acaacaatct atcaagtcta gccagacggc
    12241 agatgcgatt gtcaatgcta ataatgctgc ccttcaaatg cttgcggata catcaaaaga
    12301 agccatcccg atgatggaac gcacagctca gaatccgacc ctttcagtag catctgttac
    12361 caaattggca gaaagtttgg ttgcccaaaa taatggcatt attgcagcta tagatgaagg
    12421 gcgtcagaaa cgtcgtgagt tggatgcagc tattgtacgg tcagcagaga ctatcaacga
    12481 ttctgttaag ctacgcgatc aaaaaatcat tgctgctttg ctggagcaag gcaaagaagc
    12541 acagtctgag gcagagcaac cacttgaaac caatcaataa tataaaacct gcagttcagc
    12601 gaaactgcag
//
LOCUS       DASFQD010000069        12567 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.069, whole genome shotgun sequence.
ACCESSION   DASFQD010000069 DASFQD010000000
VERSION     DASFQD010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 12567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12567
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.069"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(73..1806)
                     /gene="ptsP"
                     /locus_tag="U1021_001462"
     CDS             complement(73..1806)
                     /gene="ptsP"
                     /locus_tag="U1021_001462"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016397822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEM4711996.1"
                     /translation="MTEMLKGIAASDGVAVAKAYLLVQPDLSFETVTVEDTNAEEARL
                     DAALAASQNELSLIRENAVASLGEEAAAVFDAHLMVLADPEMIGQIKETIRAKKTNAE
                     TGLKEVTDMFIAIFEGMEDNPYMQERAADIRDVAKRVLAHLLGVRLPNPATIDEESIV
                     IAHDLTPSDTAQLNKQFVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITEIVKDGD
                     VLAVNGITGEVVINPSEEVIAEFKAAGEAYAKQKAEWALLKDAQTVTADGKHFELAAN
                     IGTPKDVEGVNDNGAEAVGLYRTEFLYMDSQDFPTEDEQYEAYKAVLEGMNGKPVVVR
                     TMDIGGDKELPYFDLPHEMNPFLGFRALRISISETGNQMFRTQLRALLRSSVHGKLRI
                     MFPMVALLTEFRAAKAILEEEKANLLAEGVAVADDIQVGIMIEIPAAAMLADQFAKEV
                     DFFSIGTNDLIQYTMAADRMNEQVSYLYQPYNPSILRLINNVIKAAHAEGKWAGMCGE
                     MAGDQQAVPLLVGMGLDEFSMSATSVLRTRSLMKKLDTAKMEEYAHRALTECATAEEV
                     LELQKEYVDFD"
     gene            complement(1811..2074)
                     /locus_tag="U1021_001463"
     CDS             complement(1811..2074)
                     /locus_tag="U1021_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019775469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein HPr"
                     /protein_id="HEM4711997.1"
                     /translation="MASKDFHIVAETGIHARPATLLVQTASKFASDITLNYKDKSVNL
                     KSIMGVMSLGVGQGADVTISAEGADADDAIAAITETMEKEGLA"
     gene            complement(2216..3409)
                     /gene="icd"
                     /locus_tag="U1021_001464"
     CDS             complement(2216..3409)
                     /gene="icd"
                     /locus_tag="U1021_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004299080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEM4711998.1"
                     /translation="MAEKILMREGRLIVPDCPVIPYIEGDGIGRDIWSVSQKVIDAAV
                     KKAYAGQRSIQWREVLAGEKAYESIGTSLPNETLEIIREHLVAIKGPLGTPIGKGHRS
                     LNVALRQELDLYACVRPIRYFKGVPSPLKEPEKTDITIFRENTEDIYAGIEWEAGSDE
                     VAKVISFLQEEMGVVNIRFPESSSIGIKPISEEGSKRLIRSAIEYALEHQLKIVTLVH
                     KGNIQKFTEGGFRKWGYELAKEEFATELAEGTLVVNDIIADNFLQQILLAPENFQVVA
                     LTNLNGDYVSDALAAQVGGIGISPGANINYQTGHAIFEATHGTAPDIAGKDLANPCSL
                     LLSACMMLEYIGWKEAAALIIQALEDAFINKNVTLDFAKILDVAHQSTSQFSEILIDS
                     IMKKK"
     gene            complement(3412..4530)
                     /locus_tag="U1021_001465"
     CDS             complement(3412..4530)
                     /locus_tag="U1021_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019790817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEM4711999.1"
                     /translation="MTETNGLKDAIACDTRISAIENDRLSYAGYDIAELMENNASFEE
                     VIYLLWNLHLPTQIELNYFEKSLRKEYAISDAVEQCILIQSRRHLHPMSVLRSTVSLL
                     GVYNVHAEENSLEALYEQSIQIMAKVPTIIATFARLRRGLVPIEPRSDLGFAANFLYM
                     LNGEEPSDLQIKAFNKALVLHADHELNASTFAARVTASTLTDLYSCVTTAIGTLKGSL
                     HGGANERVFDMLLAIRESGDTERYLQKKLDSKEKIMGFGHRVYKTVDPRQEYLKEMAR
                     DLTFGTDDEAFYRLSEEVESFIKNKKGLIPNVDFYSATVYHVLGIDSDIFTLIFAMSR
                     MAGWIAHVQEQRKNNKLIRPRSSYLGGRNLVYIPIGKR"
     gene            complement(4527..7196)
                     /gene="acnA"
                     /locus_tag="U1021_001466"
     CDS             complement(4527..7196)
                     /gene="acnA"
                     /locus_tag="U1021_001466"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEM4712000.1"
                     /translation="MEKSHRKRLFHKGKEYSYYALDSISMEEKVDIHSLPYTIRILLE
                     SLLRKEDGEDVTKNHIMELLHYQAASPKGEIPFKPSRVILQDFTGVPVVVDLASMRDA
                     VVKAGGNPELINPEIPVDLVIDHSVQVDFFGTEDALEKNIALEFERNNERYEFLKWAE
                     NSFENYRAVPPATGIIHQVNIEFLSDVIINNDGLLYPDSMFGTDSHTTMINGIGVLGW
                     GVGGIEAEAAMLGEASYFPVPEVIGVRLAGQLPKVATATDLALKVTQLLRQENVVGKF
                     VEFFGPGLSSLTLADRATVSNMAPEYGATCGYFPIDGETLHYMRLTNRSEEHVELTEA
                     YAKANYLFYDAERFPSYSKVLELDLSTVVPSISGPKRPQDLIELTDAKAEFQASLIRE
                     VGVRGFGLEEAELDKTATVKYVEGDEQIQTGHVAIAAITSCTNTSNPYVLLAAGLLAK
                     NAVEKGLAVSKTVKTSLAPGSKVVTGYLKKSGLQTYLDALGFNLVGYGCTTCIGNSGD
                     LRPEVADAIKEEDLLVSAVLSGNRNFEGRINPLVKANFLASPPLVVAYAIAGNMNVDL
                     TRDPLGYDEKQQAVYLADIMPSREEVDDYIERYVTRDLYKEEYQQVFTDSQAWNAIET
                     KTEKNYNWNSSSTYIQNPPYFDNMQADLSIKPLENLSVLAKFGDTVTTDHISPAGNIA
                     RLSPAARYLEENGIVYKDFNSYGSRRGNHEVMMRGTFANIRIKNELADGKIGGWTRVG
                     DEILPIYDAAMRYKEAGVGSIVIAGKDYGMGSSRDWAAKGSSLLGVKAVLAESFERIH
                     RSNLVMMGVLPLQFLEGQSAESLGLTGHESYTIDLPEDVGVGQIVTVHAQTDDVKKEF
                     QALVRFDAEADIRYYRHGGILPMVVRKKLGGKV"
     gene            7583..7801
                     /gene="nrdH"
                     /locus_tag="U1021_001467"
     CDS             7583..7801
                     /gene="nrdH"
                     /locus_tag="U1021_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HEM4712001.1"
                     /translation="MVTIYSKNDCVQCKMTKKFLDQHSVDYKEINLDEQPEFIDHVKG
                     LGFSAAPVIETENDVFSGFQPGKLKALV"
     gene            7834..9993
                     /gene="nrdE"
                     /locus_tag="U1021_001468"
     CDS             7834..9993
                     /gene="nrdE"
                     /locus_tag="U1021_001468"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000053857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HEM4712002.1"
                     /translation="MSLKELGDVSYFRLNNEINRPVNGQIPLHKDKEAVKAFFKENVL
                     PNTKQFDSILDKIAYLLEENYLEKEFLDQYSPEFIIKIDQFLKDQNFRFKSFMAAYKF
                     YNQYALKTNDGAYYLESMEDRVLFNALYFAEGDEELALNLANEMIHLRYQPATPSFLN
                     AGRARRGELVSCFLIQVTDDMNSIGRSINSALQLSRIGGGVGISLSNLREAGAPIKGY
                     EGAASGVVPVMKLFEDSFSYSNQLGQRQGAGVVYLDVFHPDIISFLSTKKENADEKVR
                     VKTLSLGITVPDKFYELARKNEDMYLFSPYSVELEYGVPYSYLDITEKYDELVANPRI
                     RKTKIKARDLETEISKLQQESGYPYVINIDTANRSNPVDGKIIMSNLCSEILQVQTPS
                     VINDSQEYLTMGTDVSCNLGSTNIVNLMKSPDFGLSVRTMTRALTYVTDHSHISAVPS
                     IEAGNEQAHSIGLGAMGLHSYLAQNLIDYGSKTAVEFTNIYFMLLNYWTLVESNNIAR
                     ERKATFHNFDKSKYADGTYFDKYVTGNYQPQSDRVKELFEGIFIPSGQDWADLREKVK
                     ADGLYHQNRLAVAPNGSISYINDVSASIHPITQRIEERQEKKIGKIYYPAAGLATETI
                     PFYKSAYDMDMRKVIDVYAAATEHVDQGLSLTLFLRSELPKELYEWKTENKQTTRDLS
                     ILRNYAFNKGVKSIYYVRTFTDDGEEVGANQCESCVI"
     gene            10587..11546
                     /gene="nrdF"
                     /locus_tag="U1021_001469"
     CDS             10587..11546
                     /gene="nrdF"
                     /locus_tag="U1021_001469"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004253599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HEM4712003.1"
                     /translation="METYYKAINWNAIEDVIDKSTWEKLTEQFWLDTRIPLSNDLDDW
                     RKLTAEEKDLVGKVFGGLTLLDTLQSETGVQALRNDIRTPHEEAVYNNIQFMESVHAK
                     SYSSIFSTLNTKSEIEDIFEWTNSNEYLQRKAKIINEIYETGTPLEKKVASVFLETFL
                     FYSGFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYIGYKFQLGFNELSGEEQDKLR
                     DWMYDLLYQLYENEEGYTRSLYDAVGWTEEVLTFLRYNANKALMNLGQDPLFPDSADD
                     VNPIIMNGISTGTSNHDFFSQVGNGYLLGEVEAMQDDDYLYGL"
     gene            complement(11581..12255)
                     /locus_tag="U1021_001470"
     CDS             complement(11581..12255)
                     /locus_tag="U1021_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4712004.1"
                     /translation="MLKFIKHVALLFLYFVAYQIASGFLMVGPTLQSIQDIPAQLIDS
                     TIWICAIIGLVLSIALIILLWKYIYPRHSVDYRVTASWFHKIQWPILLYIAFFIFQFI
                     VPVPESENQKLVIEFVSAYPLIAFSSVVIFAPILEELIFRGFLATYFFPKMVDMKAVG
                     IYLVVTGSLFSLVHMPATLPQFMIYFTMGLNLGWLYLIKRDIRYPIALHMLNNGISYL
                     MIVFLV"
     gene            complement(12265..>12567)
                     /locus_tag="U1021_001471"
     CDS             complement(12265..>12567)
                     /locus_tag="U1021_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712005.1"
                     /translation="WILVGFLFFNSLSDRKKVKQLQARVKKLQKTTKGENQMSILLKE
                     LIGSKAKIRFDDEFSIAYEYTILAVDEEWVKISRELANGEIETKLVRVDNIVDLSF"
BASE COUNT         3768 a         2900 c         2280 g         3619 t
ORIGIN      
        1 aatttcgtcc tctctaggtg ttagcttttc gtctacccac tacagttgac aaagagccgc
       61 ttttttcaac gattaatcga aatcaacata ctctttttga agttcaagaa cttcttctgc
      121 cgttgcacat tctgtcaagg cacggtgagc atattcttcc atcttagctg tatcaagttt
      181 cttcataagg ctacgtgtac gaagtacaga tgttgcactc atagagaact catccaagcc
      241 catacctaca agaagtggaa cagcttgttg atcaccagcc atctcaccac acataccagc
      301 ccatttacct tctgcgtgtg cagccttgat aacattgttg atcaagcgaa ggattgatgg
      361 gttatatggt tggtagaggt atgacacttg ttcgttcata cggtcagcag ccattgtgta
      421 ctggataagg tcgtttgtac cgattgagaa gaagtcaact tctttggcaa attggtctgc
      481 aagcattgct gctgcaggga tttcaatcat gataccaact tggatatcat ccgcaactgc
      541 tacaccttct gccaacaagt tggctttttc ttcttcaagg attgcttttg ctgcacggaa
      601 ttctgtcaac aaggcaacca ttgggaacat gatacgaagt ttaccatgta ctgatgagcg
      661 aagaagggca cgcaactgag tacggaacat ttggttacca gtctcagaga tagagatacg
      721 aagggcacgg aaaccaagga atgggttcat ttcgtgtgga agatcgaagt aaggaagttc
      781 cttatcacca ccgatatcca ttgtacgaac cacaactggc ttgccattca taccttcaag
      841 aacagccttg taagcttcgt attgctcatc ttcagttggg aagtcttgtg agtccatgta
      901 caagaactca gtacggtaaa gaccaacagc ttctgcaccg ttatcattta caccttcaac
      961 gtcttttggt gtaccgatgt ttgctgccaa ttcaaagtgt ttgccgtcag ctgtaactgt
     1021 ttgagcatct ttcaaaagag cccattcagc tttttgtttg gcataggctt caccagctgc
     1081 tttaaattct gcaatcactt cttcagaagg gttgataacc acttcacctg tgataccgtt
     1141 aacagcgagt acatcgccat ctttaacgat ttcagtaatg ttatttgtcc ccaaaacagc
     1201 agcaatttca agtgtacgag ccatgatagc tgagtggctt gtacgaccac cgatgtttgt
     1261 tacaaaggct tttacaaact gtttgttcaa ttgtgctgta tctgaaggtg tcaagtcatg
     1321 tgcgataacg attgactctt catcaattgt cgcagggttt ggcaaacgaa cgccaagcaa
     1381 gtgagctagg acacgttttg caacgtcgcg gatatctgct gcacgctctt gcatgtatgg
     1441 gttatcttcc ataccttcaa aaatagcgat gaacatatcc gttacttctt tcaaaccagt
     1501 ctcagcgttt gttttcttag cacgaatagt ttccttaatt tgaccaatca tttctgggtc
     1561 agcaagaacc atcaagtgtg catcaaatac ggctgcggcc tcttcaccta ggctagctac
     1621 tgcgttctca cgaataagag aaagctcgtt ttgagatgct gcaagagctg catccaaacg
     1681 agcttcttct gcatttgtat cttcaactgt aacagtttcg aaggacaaat ctggctgaac
     1741 gagtagatat gccttagcaa cggcaacacc atcagatgct gcgattcctt taagcatttc
     1801 tgtcatattc ttatgccaat ccttcttttt ccattgtttc agtgatagct gcgattgcgt
     1861 cgtcagcatc agcaccttca gcagagattg ttacgtcagc accttgacca acaccaagac
     1921 tcataacacc catgatagat ttaaggttaa ctgatttatc tttgtagttc aaagtgatgt
     1981 ctgaagcgaa tttgctagca gtttgaacaa gcaaagttgc tggacgagcg tggatacctg
     2041 tttctgccac aatgtggaag tcttttgaag ccatatttgg attctccttt atttttacaa
     2101 aattgtgagt tatttgtgat aacccttaca aaagacatta taccactttt tgaaatcatt
     2161 ttcaagattt ttttaccttt ctttcatgtt tccgtcataa aaagagaggt tcattttact
     2221 ttttcttcat tatagaatct attagaattt ctgaaaattg actagtagat tgatgagcaa
     2281 cgtccaaaat tttagcaaaa tcaagcgtaa catttttatt tataaaagca tcttccaagg
     2341 cctgtataat taaagcagct gcttctttcc agcctatata ttccaacatc atacaagccg
     2401 aaagcaagag ggaacatgga ttagccaaat cctttcctgc aatatcggga gcagttccat
     2461 gtgtcgcttc aaagatagca tgacctgtct gataattaat gttagcaccc ggtgagatgc
     2521 ctattcctcc gacctgagcc gcaagagcat ctgatacata atctccattg agatttgtaa
     2581 gagcaaccac ctggaagttt tccggcgcca ataaaatctg ctgcagaaag ttatccgcaa
     2641 taatgtcatt tactaccaaa gtcccctctg caagttctgt agcaaattct tctttcgcca
     2701 attcataacc ccacttgcgg aaaccgcctt ctgtaaactt ttgaatattt cccttatgaa
     2761 ctaaggtcac tatcttcaat tgatgttcta gggcatattc tattgcagag cgaatgagac
     2821 gtttactccc ttcttccgaa atcggtttga taccaatact tgaagattct ggaaaacgga
     2881 tatttaccac tcccatttct tcttgtaaaa aggaaatgac tttggcaact tcatctgaac
     2941 cagcctccca ttcaatacct gcataaatat cttctgtatt ttcacgaaaa atagtaatat
     3001 ccgtcttttc aggctctttc agcggacttg gcactccctt aaaatagcga attggacgca
     3061 cacaggcata caaatctaat tcttgacgaa gtgcaacatt aagagaacga tgacctttcc
     3121 caatcggcgt ccccaaggga cctttgattg caactaaatg ctcacggatt atttccagtg
     3181 tctcattcgg caaagaagtt cctattgatt cataagcctt ttctcctgcc aaaacctccc
     3241 tccactgaat agaacgttga cctgcatagg cttttttcac tgcagcatca ataacttttt
     3301 gactgactga ccaaatatcc ctgccaatac catctccttc aatataggga ataacgggac
     3361 aatctgggac aattaaccgc ccctctctca tcaggatttt ttctgccata tttacctctt
     3421 tccaatcggg atgtaaacca aattcctacc gcctaagtag gaagagcgcg gacgaatcaa
     3481 tttattattt ttccgttgtt cctggacatg tgcaatccac cccgccatac ggctcattgc
     3541 aaaaatcaat gtaaaaatat cactatcaat acctagcaca tggtaaactg tcgccgaata
     3601 aaaatctacg tttggaatta aacctttttt gtttttaata aagctctcta cttcctctga
     3661 caatctataa aacgcttcat cgtctgttcc gaatgtcaaa tcacgcgcca tctccttcaa
     3721 atactcttga cgaggatcaa ccgttttata gactcgatgg ccaaatccca taattttttc
     3781 cttcgaatcc agcttcttct gcaaatatct ctcggtatca ccactctcgc gaatagccaa
     3841 caacatgtca aacactcgtt catttgcacc accatgcaat gagcctttca gagtcccaat
     3901 tgccgtggtg acacaagaat ataaatccgt taacgttgat gccgtgacac gcgcagcaaa
     3961 agtagacgca ttcaattcat gatcagcatg aagcaccaaa gctttgttaa aggctttgat
     4021 ttgtaaatca ctcggctcct caccattcag catataaaga aaattcgccg caaaccccag
     4081 atcagaccgc ggttcaattg gaaccaatcc acgtctcaaa cgagcaaatg ttgcaataat
     4141 cgtcggaacc ttggccataa tctgaataga ttgttcatac aaagcttcta acgaattctc
     4201 ttcagcgtgt acattatata ctccaaggag agatactgtc gaacgcaaca cgctcatagg
     4261 atgcaaatgt cgccgtgatt gaatcagaat acattgctct accgcatctg aaatcgcata
     4321 ttcttttcgc agacttttct caaaataatt taattcaatc tgagttggca aatgcaggtt
     4381 ccacagaaga tagatgactt cctcaaaaga agcgttattc tccatcaatt cagcaatgtc
     4441 ataccctgca taggacaagc ggtcattttc aattgcactg attcgcgtat cacaggcaat
     4501 cgcatctttt aacccattcg tttctgtcat acctttcctc ctagtttctt tcttactacc
     4561 ataggtaaaa tacctccgtg gcgataataa cgaatatctg cctctgcatc aaaccgcacc
     4621 agtgcttgaa actccttttt aacatcgtct gtttgcgcat ggactgttac aatttgacca
     4681 acaccgacat cttctggcaa gtcgattgta tagctttcat gtccagtcaa gccaagactt
     4741 tctgccgact gaccttctaa aaattgtaaa ggaagaacac ccatcatcac taagtttgaa
     4801 cggtgaatcc gctcaaatga ctcagcaaga acggccttca caccaagtaa acttgaacct
     4861 ttggctgccc agtcacggct tgaccccatc ccatagtctt taccagcaat aacaatacta
     4921 ccgacaccag cttccttata tctcatggct gcatcataga ttggaagaat ctcatcgcca
     4981 actcttgtcc aaccaccaat ttttccatct gccagctcat tctttatacg aatatttgca
     5041 aaagtcccac gcatcatgac ttcgtgattt ccacgacgac ttccataaga attaaaatcc
     5101 ttataaacaa tgccattctc ttcgagataa cgagcggctg gactcaatcg tgcaatattc
     5161 cctgccgggg aaatatgatc tgtcgttacg gtatcgccaa atttagccaa aacagataaa
     5221 ttttccagtg gttttatgga taaatctgcc tgcatattgt caaaataggg aggattttga
     5281 atataggttg aagatgaatt ccaattgtaa ttcttctctg tctttgtttc aatcgcattc
     5341 caagcctgac tatctgtaaa tacctgttgg tattcttcct tataaaggtc acgagtcaca
     5401 taacgctcaa tgtagtcatc tacctcctcg cgacttggca taatgtccgc aaggtagaca
     5461 gcttgttgct tctcatcata ccccagcgga tcccttgtta aatctacatt catatttccc
     5521 gcaatagcat aggcaacaac aagcggtggg ctcgctaaga aattagcttt taccaatgga
     5581 ttaatccgtc cttcaaagtt acgatttcca gacaataccg cagaaaccaa taaatcttct
     5641 tccttaatcg catccgctac ttcaggacgc agatcacctg agttaccgat acaagttgta
     5701 caaccataac caaccaaatt gaaccctaag gcatctagat aggtctgcaa acctgatttt
     5761 tttaaatagc cagtcactac ttttgagcct ggtgccaatg acgtcttgac cgtcttagaa
     5821 actgccaaac ctttttctac cgcatttttt gccagtaatc ctgccgccaa aaggacatac
     5881 ggattggagg tatttgtaca cgaggtaatc gccgcaatag caacatgacc tgtttgaatt
     5941 tgctcatctc cttcaacata cttaaccgtg gctgttttat ctaactctgc ttcctccaaa
     6001 ccaaatccac gcacacctac ttcacgtatt aaactagcct gaaactctgc ttttgcatct
     6061 gttaattcta tcaaatcctg tggtctttta ggaccagaaa tagatgggac tactgttgat
     6121 aaatccaatt ctaaaacctt gctataagac ggaaaacgtt cagcatcata gaataaatag
     6181 ttagccttag cataggcttc tgtcaactcc acatgctcct ccgaacggtt ggtcaatctc
     6241 atataatgta aagtttctcc atcaatcggg aaatagccac aagtcgcacc gtattctgga
     6301 gccatattgg aaacagttgc tcgatccgct aatgtaagag aagataaacc tggtccaaaa
     6361 aattcgacaa acttcccaac tacattttcc tgacgtagaa gttgagtgac cttaagcgcc
     6421 aaatccgttg cagtggcaac cttaggcaat tgcccagcta ggcgaacgcc aatcacttca
     6481 ggaacgggaa aataggatgc ttcacccaac attgcagctt ccgcctcaat accacctaca
     6541 ccccaaccaa gtacaccaat accgttaatc atggtcgtat gactgtctgt accaaacata
     6601 gaatctggat aaagcaagcc atcgttgttg ataataacat cgcttagaaa ttcaatattt
     6661 acctgatgga taattcctgt cgctggaggc acagcgcgat aattttcaaa ggaattctct
     6721 gcccatttca gaaattcata gcgttcatta tttctttcga actctaaggc aatatttttc
     6781 tccagagcat cttcagtccc aaaaaaatca acttgaacag agtggtcgat gactaaatcc
     6841 actggaattt ccgggttaat caattcaggg tttccacctg ctttcaccac tgcatcacgc
     6901 atggaggcta aatctaccac aacaggaaca cctgtaaaat cttgcaaaat aacacgacta
     6961 ggtttaaaag gaatttcccc tttaggagat gcagcctgat aatgaagtaa ctccattatg
     7021 tgattttttg taacatcctc accatcttct tttcttaaaa gactctctaa taaaatacga
     7081 atagtatagg gaagtgaatg aatatccact ttttcttcca ttgaaatcga atccaatgca
     7141 taatatgaat attctttccc tttatgaaac aagcgttttc tatgtgattt ttccatattt
     7201 tataacctct ttcgacatta ttaaatagta tagtacaaaa gctaatatat attcaataca
     7261 tatatcacta tagatgttat attttgtaac atcgtatatt ttcttaaaaa tattgcgaca
     7321 tttgtaaaaa agctgattta tactttaccg agagattgtt agggttatca aaccaaatag
     7381 aaacagctat gtaaacgcta tttttcgact tggcatcatt ggacgtatgt acaatatatg
     7441 gtgtcttgtg aaaatattgt gcactatatt ttgtgatttt aaataaactt ccttcttgac
     7501 tttaacctta aaatcttgta tcctagattg gtaacaaaat tgggattttc tattaatccc
     7561 tcatggacaa aggagaaatt gaatggtaac gatctattca aaaaatgatt gtgtacagtg
     7621 taaaatgacc aagaaattct tggatcaaca tagtgtagat tataaagaaa tcaatctaga
     7681 tgaacagcct gaatttatcg atcacgtaaa agggctcggt ttctcagctg cacctgttat
     7741 cgaaactgaa aatgatgttt tctcaggttt tcaaccagga aaactaaaag ccttggttta
     7801 actccctact gtttatagaa agagattgcg actatgagtt tgaaagaatt aggcgatgtg
     7861 tcctacttcc gtttgaataa cgaaattaac cgccctgtta atgggcaaat cccactccac
     7921 aaggacaaag aggctgtcaa ggctttcttc aaggaaaatg tccttccaaa taccaagcaa
     7981 ttcgatagta ttttagataa gattgcttat ttattagaag aaaattacct tgaaaaagag
     8041 tttttggacc agtatagccc agaatttatc atcaaaatcg atcaattctt gaaagaccaa
     8101 aatttccgct tcaagtcttt catggcagcc tacaagtttt acaaccagta tgccctcaaa
     8161 accaacgacg gtgcctacta cttggaaagc atggaagacc gtgtcctctt caacgccttg
     8221 tattttgctg agggcgacga agaattggca ctaaacctgg ccaacgaaat gattcatttg
     8281 cgttaccagc cagcaacacc gtctttcctc aacgcaggcc gtgcccgtcg tggtgagttg
     8341 gtgtcttgtt tcctcattca agtcactgac gatatgaact cgattggacg ttctatcaac
     8401 tctgctctgc aattgtcccg tatcggtggt ggtgttggta tttcccttag caacttgcgt
     8461 gaggcaggtg ctccaatcaa gggctatgag ggggcagctt ctggggttgt tcctgttatg
     8521 aaactctttg aggacagctt ctcctactct aaccaacttg ggcaacgcca aggagctggt
     8581 gtagtttatc ttgatgtttt ccacccagac attatttcct tcctttcgac taagaaagaa
     8641 aatgccgatg agaaagttcg cgtgaagacc ttatcactcg gtatcaccgt tcctgataaa
     8701 ttctacgaat tggcacgtaa aaacgaagat atgtacctct tcagcccata ctcagttgag
     8761 ttggaatacg gtgtccctta tagctacctt gacatcacag aaaaatacga cgagttggta
     8821 gcaaacccac gcattcgtaa gacaaaaatc aaggcacgtg acttggaaac agaaatatcc
     8881 aaactccaac aagagtctgg atatccatac gttatcaaca tcgatactgc caaccgtagc
     8941 aatcctgtcg atggtaagat tatcatgtcc aacctctgtt cagaaattct acaagtccaa
     9001 acgccaagcg ttatcaacga ctctcaggaa tacttgacta tgggaacaga cgtgtcatgt
     9061 aaccttggtt caaccaacat cgtcaacctc atgaagtcac ctgactttgg actttctgtc
     9121 cgtaccatga cacgcgcctt gacctatgtg acggaccact cgcacatttc tgcagtaccg
     9181 tctatcgaag ctggtaacga gcaagctcat tctatcggtc ttggtgctat gggacttcac
     9241 tcttatttgg cccagaacct gatcgactac ggttcaaaaa cagccgtaga atttaccaac
     9301 atctacttca tgctccttaa ctactggacc ttggtagaat caaataacat tgcccgcgaa
     9361 cgtaaggcta ctttccataa ttttgacaaa tcaaaatacg cagacggtac ttatttcgac
     9421 aagtatgtga ctggtaatta ccaaccacaa tctgaccgtg ttaaagaact ctttgaaggc
     9481 attttcattc caagtggaca agattgggct gacctccgcg aaaaagtaaa agcagatgga
     9541 ctctatcacc aaaaccgcct agccgttgca ccgaatggat ctatcagcta tatcaacgat
     9601 gtttctgctt ctattcaccc gattacccag cggattgaag aacgccaaga gaagaaaatc
     9661 ggtaaaatct actatccagc agctggctta gcaacagaaa ccattccatt ctacaagtct
     9721 gcctatgaca tggatatgcg caaggtcatc gatgtctatg ctgccgcaac agaacacgtg
     9781 gaccaaggtt tgtccctcac cctcttcctc cgcagcgagc ttccaaaaga actctacgaa
     9841 tggaaaacag agaacaaaca aaccacccgt gacctctcta tcctccgtaa ctacgccttc
     9901 aataagggtg tcaagtctat ctattatgta cgtaccttta ccgatgacgg cgaagaagtc
     9961 ggcgcaaacc aatgtgaaag ttgtgtaatt taagacacta acattcattg atgctaaagc
    10021 atctaatgaa tgaacggtac tgactatatg gtcagtacct aagtggctta ctacctcgaa
    10081 aagtcgttaa gttcgaacga cttttctcag gtcgtaactt gcaagggatt agctgttggc
    10141 aagccaacta cctaatctac gccaaccgct atgagcggat tggctagcta cctcactaac
    10201 ttcgaaactg aagaaatatc gtcttcagtt tctacgtgtc gtaagatgtg aggacgtttc
    10261 aacagtctgg gggactgttg aaagttggaa atgagaaaaa tggaaatacc gcagagatgt
    10321 cttgcatctc aaagggattt atcttttttg ccaagtcctt agcccgaact cgatttcgac
    10381 gtagcaggat tagctgttgg caagccaact agctaatcta cgccaaccgc tatatacgga
    10441 ttagctagct accttacgac actgtcgttc acgatgtgaa gcaactaata agcgatcgat
    10501 taaaatccct tttaggggat ttttttacag gctactatct atttgtgata taatatttga
    10561 agtataagaa aaagaaagag aatatgatgg aaacctacta caaagccata aactggaacg
    10621 ccattgagga tgtgattgac aagtcaactt gggaaaaatt gaccgagcaa ttctggctcg
    10681 atacacgtat cccattatca aacgacttgg atgactggcg taaactgact gctgaagaaa
    10741 aagacctggt tggtaaggtc tttggtggat tgaccctctt ggataccctt caatctgaaa
    10801 caggtgtcca agccctccgc aatgatattc gtacacctca tgaagaagct gtttacaaca
    10861 acatccaatt catggagtca gtccatgcca agtcttactc ttctatcttc tcaaccttga
    10921 ataccaagtc tgagattgaa gacatctttg aatggaccaa cagcaacgaa tatttgcaac
    10981 gcaaggcaaa gattatcaac gaaatctacg aaacaggtac acctcttgag aagaaagttg
    11041 ccagcgtatt cctagaaacc ttcctcttct actctggttt cttcacgccg ctctactacc
    11101 ttggcaacaa caaactggcc aacgttgcag aaatcatcaa actgattatc cgtgacgagt
    11161 ctgttcacgg tacctacatc ggttacaagt tccagcttgg tttcaatgaa ttgtccgggg
    11221 aagaacaaga taaactccgc gactggatgt acgacctgct ctaccaactt tatgaaaatg
    11281 aagaaggcta cacgcgctcc ctttatgacg cagtcggctg gaccgaggaa gtattgacct
    11341 tcctccgtta caatgccaac aaggccctca tgaacttggg gcaagacccg ctcttccctg
    11401 actcagcaga cgatgtcaac ccaatcatca tgaacggtat ttcaactggt acatctaacc
    11461 acgacttctt ctcacaagtc ggtaacggct atctactcgg tgaagtggaa gctatgcagg
    11521 acgatgatta tctttacggt ttataatcaa aaaagcagtt caatccgagc tgcttatttt
    11581 ttatactaaa aatacaatca tcaaataaga aataccgttg ttgagcatat gtagcgcaat
    11641 cggataacga atatcacgtt tgatcagata gagccatcct agattgagtc ccatcgtgaa
    11701 ataaatcata aattggggaa gagttgctgg catatggacc agactaaata aagaccccgt
    11761 tacaacaaga tagattccaa cagccttcat atctaccatt ttagggaaga aataggtcgc
    11821 taaaaatcca cgaaaaatca attcttctaa aattggagca aagatcacta ctgagctaaa
    11881 tgcaatcaag ggataagctg atacgaattc gatcacaagc ttttgatttt cactttctgg
    11941 gactggtaca ataaattgga agataaaaaa tgcaatatag agcaatatcg gccattgaat
    12001 cttatggaac catgaagctg tcacacgata gtcaacagaa tgacgtggat agatatactt
    12061 ccataacaga ataatgagcg caatggagag aactagacca attatcgcac aaatccaaat
    12121 tgtactgtca atcaactggg caggtatgtc ttgtatgctt tgtaaagttg gtcctaccat
    12181 cagaaaacct gaagcaattt gataggcaac aaagtataga aatagtaatg cgacgtgttt
    12241 gataaatttt aacataatcc ctccctaaaa gctcaagtca acaatattat cgactcgtac
    12301 caacttggtt tcaatctccc cattcgctaa ttcacgagaa attttaaccc attcctcatc
    12361 aactgccaaa atggtgtatt cataagcaat agaaaattca tcatcaaagc ggattttagc
    12421 tttacttccg atcaattctt tcaataaaat ggacatctga ttttctcctt ttgtagtttt
    12481 ctgcaacttt tttaccctag cttgcaactg cttcactttt ttcctatctg atagagaatt
    12541 gaaaaataga aatcctacta gaatcca
//
LOCUS       DASFQD010000070        12523 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.070, whole genome shotgun sequence.
ACCESSION   DASFQD010000070 DASFQD010000000
VERSION     DASFQD010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 12523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12523
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.070"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(341..3194)
                     /locus_tag="U1021_001472"
                     /pseudo
     CDS             complement(341..3194)
                     /locus_tag="U1021_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638462.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
     gene            complement(3763..5940)
                     /locus_tag="U1021_001473"
     CDS             complement(3763..5940)
                     /locus_tag="U1021_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910563.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HEM4712006.1"
                     /translation="MNSKIFSLRKSKMGLVSVAIAFLWIGTGMNMETAMAEETDATAL
                     ETQLESKESSLTNTVSENAEAEEVTDEVPSEEKKSEEMEDMEEELPFIENHLEVAPIQ
                     AGDQTISGNTTPGGYVAITIDGEAITSIENILEADDKGDFSYRLSKPLAHSQTVEISA
                     LPKQFWTLEADSEERKVVVRTNRHPEAYEIPAKRLEKTSNGMHQVFIEPVFEHTSKVI
                     GHTSVKGSVYLSINGSFVSDKTLIDPKDGRFEVTFSESLAGSKFKADDRLVLSFVSED
                     GQPVITNTIVKPLVKEKVSSQMTVKPLSSATSVLEGTTFPLGRVHLYNADTSEFIMEA
                     IADETGHYKIALPALQSEDKYYRLTHNQQEDLVSVHLDTVDGSSILLDKSVMASLATY
                     LQDADMDEATDEDPIIVPKLHNKKDYIVGRTIHLNAYVRMVSSIKGKQYPPVQVDELG
                     FFGFQIQDLQLPFEKGERIRFEIIDPVTNNIIASKEEVVGQYLEDEDVMDLPFQVEKV
                     TTDHGYISGKTAPDVMIELVSTQNGEEIIGKTSTDSTGRFEFDLGSRVLKNGETLSFR
                     AFDKEGEQVAWEVVTVQKGNGHRINKPDKKDEKEEQPSKEITKNIEQSDTLEQTTLPP
                     VRQTLTDKKVEQNAEPSKEETVSIFDDSKKDMPTKQEKMARTVRDKGTKGNVSVHDSG
                     ENTQVQSLPKTGEKTSLVANIMLSIILFLFALFIGKKKITESE"
     gene            complement(6542..7477)
                     /locus_tag="U1021_001474"
     CDS             complement(6542..7477)
                     /locus_tag="U1021_001474"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000036024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-dependent inorganic pyrophosphatase"
                     /protein_id="HEM4712007.1"
                     /translation="MSKFLVFGHQNPDTDAIASSYGWAHLEREVFGRDAEAVALGTPN
                     EETAFALDYFGVTAPRVVESAKAEGVSQVILTDHNEFQQSIADIKEVEVAAVIDHHRV
                     ANFETANPLYMRLEPVGSASSIVYRAFKENGVTPPKEVAGLLLSGLISDTLLLKSPTT
                     HTTDPQVAAELAEIAGVNLEEYGLALLKAGTNLASKSAEELIDIDAKTFGLNGNDVRV
                     AQVNTVDIAEVLERQAEIEATMTAASAANGYSDFVLMITDIVNSNSEILALGSNMDKV
                     EAAFNFKLENNHAFLAGAVSRKKQVVPQLTDAFNA"
     gene            7615..9312
                     /locus_tag="U1021_001475"
     CDS             7615..9312
                     /locus_tag="U1021_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HEM4712008.1"
                     /translation="MKFSDYTYVRPDYETIKAQFSDLTNQLAQASDLETTRTLVAAVT
                     KLLNLVDTQYNLWMIRHTIDMNDEFYNEETKFWNEYSPLFEELTTNYYRVIVQTPYKA
                     ELADILPETFFMQAENKLKTFSSAVIPLFQKENESTDEYSKLIAGAEIDFQGQTYNLA
                     QMGPFGQSTDREVRKAASAATTAFFESKEADFDRVYDELVKVRTEIAHKLGFKDYVEY
                     GYLKMNRFDYNRDMVKVYREEILKHIVPIVQNLRERQAKRLQVPSLKHYDLNLEFLDG
                     NAVPQGDPDFILSQAQDMYRELSAETGEFFDFMIEHELLDLVAKPGKNSGGYCTYIPD
                     FKSPFIFSNFNGTSGDIDVLTHEAGHAFQVYRSRWIQSPEVVWPTYETCEIHSMSMEF
                     MTWPWMDRFFKEQVDKYKFTHLASALLFLPYGVLVDHFQHEVYERPEMTLAERKATWK
                     KLQDLYLPDRDYSESEALNRGIFWYRQGHIFASPFYYIDYTLAQVCALQFWKRTQVDH
                     DETAWEDYIRICDLGGTKSFLQVVEAANLQSPFKEGALESTAKAAASWLNAVNDSDL"
     gene            complement(9341..9688)
                     /locus_tag="U1021_001476"
     CDS             complement(9341..9688)
                     /locus_tag="U1021_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4712009.1"
                     /translation="MATFTQHTVPECPYVTTQSVISGKWSILLLHHIEEGPIRFNEMH
                     RRLTGISQATLTKQLRQLEDDGLITRKVYAQVPPKVEYELSEIGQEFKLVLQQIETFG
                     DKYINFVKSKKSE"
     gene            9844..10383
                     /locus_tag="U1021_001477"
     CDS             9844..10383
                     /locus_tag="U1021_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009732451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEM4712010.1"
                     /translation="MKNILFIVGSLREGSFNHQMAKQAESILEGQATVSYLNYKEIPL
                     MNQDFETPVLPAVQTARDAIMAADAIWIFSPVYNFAIPGTVKNLIDWLSRALDLSETR
                     GPSALQDKIVTVSSVANAGHEPMFASYQALLPFVRMQVVGEFTGTTVSPEAWGTGQLV
                     LSEEAIAGLQAQAQALLEA"
     gene            10551..11171
                     /locus_tag="U1021_001478"
     CDS             10551..11171
                     /locus_tag="U1021_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEM4712011.1"
                     /translation="MKLYYIIDAYCGWTYGFNHIFTKFMQDHPDIEIEVINGGLFVGD
                     NKKKMVDFQQAQTINKQIESYYQMSFGDNYNQLFKDKDFTMDSLGPARAYSVLKNYVE
                     TPNHAQLTLDIQALFFEDGLDLSQADSYTSLIGSYQLPTKAMEELSSNLKQPESLHPD
                     FIKAYEMGVTPFPTLLLEKDGNFFNLINQVRTVDDLEKNFQEAVAQ"
     gene            11186..11587
                     /locus_tag="U1021_001479"
     CDS             11186..11587
                     /locus_tag="U1021_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEM4712012.1"
                     /translation="MSKNQLYKNILEETYLATAQGRIEDFKSHLAADISWTEASGFPY
                     AGTYIGPDAVIENVHARLGSEWTNYSATPVDYAFSGNRVMVYGYYKGTYNLTEKSFQA
                     DFVHIYDFNAENRITHFIQIVDSALVEKAMR"
     gene            11674..12516
                     /locus_tag="U1021_001480"
                     /pseudo
     CDS             11674..12516
                     /locus_tag="U1021_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647223.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
BASE COUNT         3610 a         2675 c         2282 g         3956 t
ORIGIN      
        1 aaaaacgcat aaaatcgtgt tgctaagaac gttgatttta tgcgttttat tatatgactt
       61 atctcgatat ttttattgaa atttatgttt atgcccaact atacttctca gaatcaatga
      121 ccatatctca tctcagccta gtatagattg acagatttat tctacattcc cagttcagcc
      181 tctgcagcta ttgcgaatgg ctcgttttat attcaatctc caaagatttc ctaaaacttg
      241 gatctgtacg gagggtaaaa caattcgata cactattata ggcataatct ctactctatt
      301 aaccatatgt atatacaagt agaaattaca cgaccaacat ttactccgat tcttgcttac
      361 gttttgtacg ataaagtacc tgagctccta caagaagaga gagggcagtt aacgtataga
      421 ttggagaatc agcttgtcca gtagatggaa gggtatgtga tttctcgttt gaacgattca
      481 cgctagaaac tttctccata ttttcagaaa gacgtgattt ctgattcata gcaagctcta
      541 cctgatttgc caccgtttcg gcattcactt tatctttgat agtagaaatt ggagcagagt
      601 tatctgaatc tttaatagtc ttagaagaat ctggagtatc actattttct gctttatcaa
      661 tctcttcagt tgactctggt ttcattgggc gagacaaatc tggggtatcc gttacttttg
      721 gaatatccaa tttttgtgta cctgctgaac tgtctgtatc ttcgataagc ttaggtgatt
      781 ctggttcaac attatttttc gcgtaatcaa tttcatcggt tgactcaggt ttcattggac
      841 gtgatgtatc tggaataata atattgtccg ttgcttttgg aattgttgag tctggtttat
      901 ttgctgaatc atcggttgag tcttcgatag gcttaagtga ttctggctca acattattgc
      961 ctggttttcc ggtctcttta ggtgactctg gttgcattgg aagagttgct tctggaacat
     1021 ttggtttttc ctgcataggt gtttcaggag tccccttagg cgtttcattc tctacttttg
     1081 gcatatcaat tggcttgtca ggaacttgtg gctcaatagg aacaggaacc gaaactttct
     1141 tagttttatg gttaagagac acttttaggg atgagtatac tttcttccca actttatcat
     1201 taatctcatg gctaatctct gtacttacaa gtttttggga atcttttttc tttttatctt
     1261 tcagttgtaa ctgataagtt aaagaaagtg gttgattagt ctgataagcc ttgattaagt
     1321 cttctttatc taagttccaa gtaatagttg ttttcgagct agtaatccat gacagccaga
     1381 acgttgaaga attcttttta atacttactt tagggtcttt gggttcttta acaatttcaa
     1441 cattatcttc aagagtatct accaatgtca ctttagtcag tacatcttta aatttttctg
     1501 caacattctc atcaacactt aaaaacttct tatcatcccc agacattttt ttcaagtatt
     1561 catcaaattt atttttattc ttttcttcgc cagctttgtc tttggtcaca tcaacagcgt
     1621 agacatgaat accattttta gtagcaatct tggcctctgc ttgagcagag aggttgtggt
     1681 tgttaaaaat attttttcta ccgtagaaaa tataatcaac gagggaattc gcaaataaat
     1741 caattgcttt ttcagaagta ttcgttaaac cgagcttttc agcgatatag ctaagagtgt
     1801 ttgtaggtaa ctcagctttt tttaactcag ttgttaaatt atgttttatc ttgctaacaa
     1861 tttgatttct aaatgtcaac ggctcaactt tacgttcata aaagctacgg aaatgataac
     1921 cttcaccaat ttgtttctcg taattgaaat ttttttcttc taactgcgaa ctgtctacat
     1981 caaccaaatt aatatagtct aacggatctt ttgcaattat tcctataagc tttgttattc
     2041 ctgctatagt ggatacatca tctaaagctt tatcgaaacg tgtaatccca actttgttca
     2101 aaaaacttat tagactcttt gcatcatcca acaagtttgc cctgcgaaca gtcacatcaa
     2161 atgtaaatgg ccaaggcaag agtggatttg tatgtacaac cttattttcc tcaatggtct
     2221 tataagtagg ttttgatttt acatcatccg acaaatcata actaaatgta gactcccctt
     2281 gtgacagaag tacaatatgt ttgcgtttcc ccgagttctc gctttctaaa atgcgacgtg
     2341 cttcatggat tgctccctgc atatctacgc cccaattgta attttgttca gcatcagtga
     2401 aaagcttctc aaccgtagtt tctacattag cactggtatg gtaacttctt gagcttcaga
     2461 taacttgcgg ttgaaaccga ttacacgcac agagttacga gaattatgat cattggttgg
     2521 gtcagtcatc ttttcgacaa gctttataat gttatcttta gctgtttttt agcatcttca
     2581 tccatttttt tatatgtatc caccaagaca actatttctg cacccttgtc aatttctttc
     2641 ggcacaattt gagttgttac tgtgacaact ccctcttgat ctacttctgc tgttcgagaa
     2701 actgtaaaaa gctctttaga agttttgtcc actgtactag atactgtttc cgttggtttt
     2761 tcaaccttag tagaatagtc gtctacttcc ttctcctcat actgaacggt tcgttcttct
     2821 ttttctgttg ctttttcttc agaagaacta gtgttttcag caacttgcac ttctgattct
     2881 gaagcgtttt cattcgtcaa tgcctcagga gaagcagatt ctgcattcga ttttggtaag
     2941 tccaaagtag aagaggagtc aaccacctct ccttccttgt tttcattagc ttgggcaact
     3001 tcagggtctt caacgacagc agtagaccta atcagagaag tgctatctgt ctccgaagtt
     3061 ttttctaaag taggtgtttc tgcatatact gtcacagtat ttttgggata gagtgttccc
     3121 gataaagcta cccctgctcc tagcgaaaca agtccaattg atagcttccg caaagtgaat
     3181 ttaggatgat tcattatgat accttctcct tgttctctat aaatttagaa tgtattttca
     3241 cccttcttta ggtattttca aaaaaggaag tatggatgtc aatggtaaat aactttagta
     3301 taattttgtt caacaagcgt agagcttttg gaaaaagaat gggcaccttg tgtattcata
     3361 aggtgcctaa gtccttctgt taactgctta cttcacctat caagtcaagc aagcatgatt
     3421 acaactcaaa gttcctattt atcattaaca atgaccatat cacaaaatgt gcgagtctat
     3481 tactacataa ctcattctac catataattt aaaaacagaa tttgtttttt ctctatcgtt
     3541 tgtttatgtt tattctatta caaaaatgat aattggtctt tgagtctgtt atcacacaca
     3601 tttatacaag tgataaatat tgcaatgagt cttcaaactc tactttcacc tctataagca
     3661 aataattcat tgaaagaaaa attttaactc ttttaattta aagctacaca atgcctctca
     3721 tctgtcgcaa acgaattttt gagagagctt tgtcatcgcc ttttactcac tttctgttat
     3781 ctttttcttg ccaatgaata aagcaaataa gaataatatg atcgataaca ttatattggc
     3841 aaccaagctc gttttttcac cggtcttagg caggctttga acttgggtat tctcaccact
     3901 atcatgcaca gatacgtttc cttttgtccc tttgtctctt acagtacgag ccattttctc
     3961 ttgcttagta ggcatatctt ttttcgaatc atcaaaaata gaaaccgttt cttcttttga
     4021 tggctctgca ttttgctcta cttttttgtc agtcagcgtt tggcgtacag gtggcaaagt
     4081 agtttgctca agtgtgtctg attgttcgat atttttggta atttctttgc taggttgctc
     4141 ttccttctcg tcctttttat ctggtttatt aatgcggtga ccatttcctt tttgaaccgt
     4201 tacgacttcc caagctacct gttcaccttc tttatcaaac gctctaaacg ataaggtttc
     4261 tccatttttt aaaacacgac tacccaaatc aaattcgaat cgacctgttg aatcagttga
     4321 agttttacca attatctcct cgccattctg agttgatact agttcaatca ttacatctgg
     4381 agctgttttg ccactgatgt aaccatgatc tgtagtgact ttttctactt gaaatggtaa
     4441 atccatcacg tcttcatctt ccaaatattg ccctacaact tcttccttac tagcgatgat
     4501 attatttgta accgggtcaa tgatttcaaa gcgaattctc tcaccttttt caaaaggcaa
     4561 ttgtaaatct tgaatttgga aaccaaaaaa tcctaattcg tccacttgaa ctggaggata
     4621 ctgttttcct ttgattgacg aaaccatgcg aacgtaggca ttaagatgta tcgttcgacc
     4681 gacaatataa tcttttttat tatgcagttt aggtacaatg ataggatctt catctgtcgc
     4741 ttcatccata tctgcatctt gtaaataagt tgctaaagat gccataacag atttatccaa
     4801 taatatactt gaaccatcaa ctgtatcaag atggacagat accaagtcct cttgttgatt
     4861 gtgagtcaat ctgtagtact tatcctcgga ttgtagggca ggcaaagcaa tcttatagtg
     4921 acctgtctca tcagcaatag cttccatgat aaactctgaa gtatcagcat tgtatagatg
     4981 cacacgacct aaaggaaatg tagttccttc caaaactgaa gtcgcacttg ataaaggttt
     5041 tactgtcatt tgtgaagata ctttttcttt taccaatggt tttacaatag tattagtaat
     5101 caccggctga ccatcttctg atacaaaaga caaaaccaat ctatcatctg ctttaaattt
     5161 tgaacctgct aaactctcgg aaaaagtaac ctcaaaccgt ccatctttag gatcaattag
     5221 tgtcttatca gagacaaaac taccatttat tgatagatag actgaacctt tgacagaggt
     5281 atgaccaata actttgctcg tatgttcaaa aactggttcg atgaacactt gatgcattcc
     5341 attagatgtt ttttctaatc tttttgctgg aatttcataa gcctctggat gtcgattagt
     5401 cctcactact accttacgct cttcagaatc tgcctctaga gtccaaaact gtttcggcaa
     5461 agcactaatt tccacagttt ggctgtgagc aagtggttta ctcaaccgat aagaaaaatc
     5521 tcccttatca tctgcttcca aaatattctc aatagaagta attgcttccc catctatcgt
     5581 aatcgctaca tatccaccag gagtggtatt ccctgagatg gtttgatctc cagcttgaat
     5641 cggagcaacc tctagatggt tttcaataaa tggaagttct tcctccatat cctccatctc
     5701 ttccgatttt ttttcttcac tcggtacctc atcagtcact tcctcagctt cagcattttc
     5761 cgaaactgta ttggtaagcg atgattcctt gctttctaat tgagtttcaa gagctgtagc
     5821 gtcagtctcc tcagccattg cggtttccat attcatccct gtaccaatcc atagaaaagc
     5881 aattgccacc gaaactaaac ccatcttact ttttctcaac gaaaaaatct tgctattcat
     5941 cttttctcct tatatctgta ttaacaatta acgacacata ttgtcctagt tttattataa
     6001 aaaaaacatc tcatagaaca ttgtttttca ttagtttttt atctgtttta cagttgcctg
     6061 taatatatag tatgctacat ttcgcaaaaa ctttgctggt tctcatcgtc atttagtttt
     6121 tcttttatta cttctgtaat caatttgaat tgacagaacg attagaagca ctttacttgt
     6181 aaacaaaatt tctaaattat ggcacattca aagtaaaaaa ctagcgcctg aagttttcta
     6241 tgatacagat acttgtttat ctcggagtgc tcctttaatt cgtcaactta tactcaatga
     6301 aaatcaaaat caaactaggc gacgcagata cagatagaac tgaagttcat caaatcaagt
     6361 taacaacgtc tgattttcga agagtattaa ataagagtgg gtttatttgt catgatgcca
     6421 cttgtttatt ttgttaacta tcacttcata aaacatgatt gtcctcataa taaaaagcac
     6481 ccgaaggtgc tagataaggc cttcctaccg acttcacgtt cgaggtcggt agaaaacttc
     6541 attaggcgtt gaaagcatct gtcaattgtg gcaccacttg tttcttacgg gaaacggcac
     6601 ctgcaaggaa agcgtggttg ttttccaact tgaagttgaa ggccgcttcc accttgtcca
     6661 tgttgcttcc tagggcaagg atttcagagt ttgagttgac gatgtccgta atcatgagga
     6721 caaagtcaga gtagccattt gctgcggaag ctgctgtcat agtggcttca atctctgctt
     6781 ggcgttccaa aacttccgca atatcaacag tgttgacctg agctacacgg acgtcattgc
     6841 cattcaaacc aaatgttttg gcatcaatgt caatcaattc ttctgctgac ttgctggcaa
     6901 ggtttgtacc agctttcaag agtgccaaac cgtattcttc caagttcaca ccagcaattt
     6961 cagccaattc agctgctact tgtggatctg ttgtatgagt ggttggcgat ttgagcaaga
     7021 gagtatctga aatcaaacct gataggagaa gtccagctac ttcttttgga ggtgttactc
     7081 cgttttcttt aaaggcccgg taaacgattg atgatgctga acctactggt tccaaacgca
     7141 tgtacaatgg atttgccgtt tcaaagtttg cgacacggtg gtggtcaata acagctgcca
     7201 cttccacttc cttgatgtct gcgattgatt gttggaattc attgtggtct gtcaagatga
     7261 cttggctaac gccttctgct tttgcagact caaccacgcg cggtgcagta acaccaaaat
     7321 agtcaagcgc aaacgctgtt tcttcatttg gcgttccaag tgcaactgct tccgcatcac
     7381 gaccaaacac ttcacgctcc aagtgagccc agccgtacga tgatgcaatg gcatctgtat
     7441 caggattttg gtgaccaaaa actaaaaatt tagacatgtc tacaacctca tttttctaat
     7501 aatctcctac attttaccat aaatagaaag acttgtgaac atggacgggt cgggatttgc
     7561 caaacgtttt caaaaagagt aagatagaag gtagcaatac aaaaggagaa acatatgaaa
     7621 ttttcagact atacctatgt ccgtccagat tatgaaacta tcaaggctca attttctgac
     7681 ttgacaaacc agttggctca ggcaagtgac ttggaaacaa ctcgtacact tgtggcagcc
     7741 gttacaaaat tactcaactt ggtcgatacc cagtacaatc tctggatgat ccgtcacacc
     7801 atcgacatga acgatgagtt ttacaatgaa gaaaccaagt tttggaatga gtattcgcca
     7861 ctttttgaag aattgaccac caactactac cgtgtcattg tccagacacc ttacaaggct
     7921 gagcttgcag acattttacc agaaaccttc ttcatgcagg ctgagaacaa gctcaagacc
     7981 ttctcatcag ctgtcattcc cttgttccaa aaggaaaatg aatcgaccga tgaatacagt
     8041 aaactgattg cgggtgcaga gattgatttc caaggtcaga cctacaacct ggcacaaatg
     8101 ggaccattcg gtcaatcaac cgaccgcgag gtccgcaaag ctgcttctgc tgccacaact
     8161 gcattctttg aaagcaaaga agctgacttt gaccgtgttt acgatgaatt ggtcaaggtc
     8221 cgcacggaaa tcgcccacaa acttggcttc aaggactatg tggaatacgg ctacctcaag
     8281 atgaaccgtt tcgattacaa tcgtgacatg gtcaaggttt accgtgaaga aatcctcaag
     8341 catatcgtac cgattgtgca aaatcttcgt gaacgccaag ccaaacgctt gcaggtacca
     8401 agcctgaaac actacgacct caatcttgag ttcttagacg gaaacgctgt gccacaaggt
     8461 gacccagact ttatcctcag ccaggcccaa gacatgtacc gtgaattgtc cgcagaaaca
     8521 ggcgagttct tcgatttcat gattgagcat gaactcttgg acttggttgc aaaaccaggt
     8581 aaaaacagcg gtggctactg tacctatatt cctgacttca agagcccatt catcttctcc
     8641 aacttcaacg gaaccagcgg tgatattgat gtcttgaccc acgaagcagg tcacgccttc
     8701 caagtctatc gttcacgttg gattcaaagt ccagaagttg tttggccaac ctacgaaacc
     8761 tgtgaaatcc actccatgtc tatggaattt atgacgtggc catggatgga ccgtttcttc
     8821 aaggaacagg tggataagta caagtttacc cacttggcaa gtgcccttct cttcttgcct
     8881 tacggtgtct tggtggatca cttccagcac gaagtctatg aacgcccaga gatgacacta
     8941 gcagaacgta aggcgacttg gaaaaaactc caagacctct acttgccaga ccgtgattat
     9001 tctgagtcag aagccctcaa ccgcggtatc ttctggtatc gtcaagggca tatttttgcc
     9061 agcccattct actacattga ctacacgcta gctcaagtct gtgccctcca attctggaaa
     9121 cgcacgcagg tagatcacga tgaaactgca tgggaagact acatccgcat ctgtgatttg
     9181 ggcggcacca agtccttctt gcaagtggtt gaagctgcaa acctccaatc accgttcaaa
     9241 gaaggtgccc ttgaaagcac agccaaggct gctgctagct ggctaaatgc agttaatgat
     9301 agcgacttat agcatacaaa aatctgaatg agatatgaac tcattcagat ttttttgatt
     9361 tgacaaagtt gatgtattta tcgccgaaag tttcaatctg ttgaagaacc aacttgaatt
     9421 cctgaccaat ctcgctcagt tcatattcca cttttggcgg aacctgtgca taaaccttcc
     9481 gagtgattaa accatcatct tctagctgac gcaactgctt ggtcaaggtt gcttgggaaa
     9541 tccctgtcaa tcgacggtgc atttcattaa accgaatggg accttcttcg atatgatgta
     9601 gtaataagat actccatttc ccagatatga cactctgagt ggtcacataa ggacactccg
     9661 gaaccgtatg ttgtgtgaaa gttgccataa tttctccttt gttttccctt gatactacac
     9721 attacttcac aaaaagatag tgactattta aaaaaatcgt acttgtaata tttttagtac
     9781 ctgttacaat aataccataa actgcgaaag cagaaaagaa aaaattgtta gaggtataac
     9841 atcatgaaaa acattttatt tatcgtcggt tcactacgtg aaggttcatt caaccaccaa
     9901 atggctaaac aggctgaaag catcttagaa ggtcaagcaa ctgtatctta tcttaactat
     9961 aaagaaatcc cgcttatgaa ccaagatttt gaaacaccag tcttgccagc tgtccaaact
    10021 gcacgcgatg cgattatggc tgcagatgct atctggattt tctcaccagt ttacaacttt
    10081 gctattccag gtactgtgaa gaacttgatt gactggctca gccgtgccct agacttgtca
    10141 gaaacacgtg gcccatctgc actacaagac aaaattgtta ctgtatcatc tgttgccaat
    10201 gctggacacg agccaatgtt tgctagctac caggcactcc taccatttgt tcgcatgcaa
    10261 gtcgttggtg agtttacagg tacaactgtc agtccagaag catggggaac tggacagttg
    10321 gtattgtcag aggaagccat cgccggtctg caagcgcaag ctcaagcttt gttagaagct
    10381 tagattccac aggtcaatat acatccttct gtgaccttta tcgagttgaa gatgataaaa
    10441 ttgcagaact ccgggatgtt gttgtgccaa tcgaggaaga tttcaaaact tccaatagca
    10501 atggtaaatt ctaatcaaaa accaagaaaa taagatgaaa gaaaattaaa atgaaactat
    10561 attacatcat cgatgcttat tgtggttgga cctacggctt taaccacatt ttcacaaaat
    10621 tcatgcaaga ccatcctgac atagaaatag aggtcattaa cggaggcttg tttgtcggcg
    10681 ataataaaaa gaaaatggtt gatttccagc aggcacagac catcaacaaa caaatcgaaa
    10741 gctattacca aatgtctttt ggcgataact acaatcaatt gtttaaggat aaggacttta
    10801 ccatggactc ccttggtcct gctagagcct actcagtctt gaaaaactat gttgagacac
    10861 ctaaccatgc tcagctaaca ttagacattc aagccttatt ttttgaagat gggttagacc
    10921 tcagtcaagc agacagttac accagcctaa tcggtagcta tcagttacct acaaaggcta
    10981 tggaagaact atcaagcaac ttgaaacaac cagaaagtct acacccagac tttatcaagg
    11041 cttatgaaat gggggtaacc cctttcccaa ccttgttact cgaaaaagac gggaacttct
    11101 ttaatcttat taaccaagtt cgcacagtag acgatttgga aaaaaatttc caagaggcag
    11161 ttgcgcaata gaaaagaaaa tacctatgtc aaaaaatcaa ttatataaaa atattttaga
    11221 agagacttat ctagctactg ctcaaggtcg aatagaagat ttcaagagcc atttggctgc
    11281 tgatatctct tggacagaag cttcaggctt tccctatgct ggtacctata tcggtccaga
    11341 tgcagtgatt gaaaacgtcc atgcaagact aggttctgaa tggaccaatt atagtgccac
    11401 acctgttgat tacgcctttt caggaaaccg tgtcatggtt tatggctact acaaggggac
    11461 ctacaacctt actgagaaat cctttcaagc agactttgta catatttacg attttaatgc
    11521 tgaaaataga attacacact ttatccaaat cgtagatagc gcacttgttg agaaagctat
    11581 gagataaaaa tcaattttca aaagtctatt cgtcacacat tactaagtaa ctcgaaaatt
    11641 cctataaatt gtatcagaaa gccaggtatt cccatgtaca attcccaatt tgaactgggc
    11701 ctagttgccc tcaatgttcg caatctgaag cttcaaagtc tgttttacca gcaggtattg
    11761 ggcctccaag ttctgactga aaactctaaa cagattgacc ttggtgtcag acagaccacc
    11821 cttgtccgcc tgattcaaac agagcagaag ggcgaagtta gccacagcta cggactttac
    11881 cacttggcta ttgtcctacc tagccgagag gacttaggta ccattttccg ccactttatc
    11941 gacaacaaag ttcccctcca aggcgcaagc gaccacggtt acagcgaagc catttaccta
    12001 gccgacaccg aaggcaacgg tatcgaaatt taccgcgacc ttccgcaaga ctcttgggat
    12061 gtccgcccag atggacgaat tgttggcatt actgagccta tggatgctga aacaatctat
    12121 gctttaggga aaaaagctga cgcagcctat cagatgccgc ttagcagtcg catggggcat
    12181 atccatctat ccgtccgaga aagcgctgct tctagccgat tttaccaaga agtcctagct
    12241 gtcgaggata aattctccgt cccatctgca gcctggttag cttctggcga ctaccatcac
    12301 cacctagctg tcaatgaatg aggtggaaaa aatctgaaaa ccagacaaga aggcatgcca
    12361 ggactttcct actatacggt catctattcc aatcaagaag cttttgaagc aaccttgaat
    12421 cgtgccattg ctgcaaacct aaaccttcaa agactagaca atagcgcagc ctttgttgat
    12481 gtggatggta taaaaactaa gcttgtttta gaataatacg aaa
//
LOCUS       DASFQD010000071        12445 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.071, whole genome shotgun sequence.
ACCESSION   DASFQD010000071 DASFQD010000000
VERSION     DASFQD010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 12445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12445
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.071"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(59..871)
                     /gene="purR"
                     /locus_tag="U1021_001481"
     CDS             complement(59..871)
                     /gene="purR"
                     /locus_tag="U1021_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pur operon repressor"
                     /protein_id="HEM4712013.1"
                     /translation="MKLRRSERMVVISNYLINHPYELTSLNTFAEKYESAKSSISEDI
                     AIIKKAFEESSIGHIETITGASGGVVFTPSISKAESVEIAQALRDQMAESNRILPGGY
                     IYSSDLLSTPHILKNVGRIIADAFKDEKIDAVMTVATKGVPLANAVANVLNVPFVIVR
                     RDLKITEGSTVSVNYVSGSSDRIEKMFLSKRSLKAGSRVLIVDDFLKNGGTINGMISL
                     LSEFDSTLVGVAVFAENQKGDRSVANYKSLLAVTDINVKENRVDVELGNIFD"
     gene            complement(962..1840)
                     /locus_tag="U1021_001482"
     CDS             complement(962..1840)
                     /locus_tag="U1021_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEM4712014.1"
                     /translation="MTVKIVARESLTKGWSTDQKYQVQLEDGRLGLLRIAERPAYEAK
                     RLEFQLVEHLFGLGLPVAEPLSFWADDLSVYTLYEWVEGQDMNEVASSLSDSVLYDLG
                     CQSGQFLRTLHALPIDQSQRDWNSFYQAKIDSKLAAYQVASHSYPNVQAMIDFVQANR
                     HLLEGRPIAYHHGDFHTGNFLRGQNGRLKILDFDRHDIGDPWEEFNRLIFTADLSPAF
                     ARGQVDAYFDGAIPEEFWRLMALYVTVNSLGALSWAERVDPLQIPLMQEQAATISEWY
                     ADFTRWIPTWYLQVYS"
     gene            complement(1840..2781)
                     /locus_tag="U1021_001483"
     CDS             complement(1840..2781)
                     /locus_tag="U1021_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease YhaM family protein"
                     /protein_id="HEM4712015.1"
                     /translation="MKINQMKKDEFFEGFYLIKTAEVRQTRAGKDYLALTFQDDTGEI
                     EGKVWDAQPGKIKDFTAGTVVHMQGRREVYNNTPQVNQLVLRLPKAGEPNDPADFKEK
                     PPVDVKDTKDYLSQMIFRIENATWQRIVRALYSKYDKEFYSYPAAKINHHAFYSGLSY
                     HTATMVRLADKIGDIYPQLNKSLLFAGIMLHDLAKVIELTGPDNTGYTVRGNLIGHIS
                     LIDEEITKVLMELGIDDSLEEVTVLRHVILSHHGLLEYGSPVRPQIMEAEILHMIDNI
                     DAEMMMMLSALDKVGPGEMTNRIFAMDNRAFYKPNLD"
     gene            complement(2771..4009)
                     /gene="rmuC"
                     /locus_tag="U1021_001484"
     CDS             complement(2771..4009)
                     /gene="rmuC"
                     /locus_tag="U1021_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEM4712016.1"
                     /translation="MDIVLLILLILVLLALVFLYGKWQSLALLLQDQAEDTADNLSDQ
                     LSYQLDNATLKQQQAIHQEVERLRTELYQQLTDIRQELNKSHLETRDATDRRLQAIQE
                     SNEKRLEEMRQTVEEKLEKTLQTRLQASFETVSKQLESVNRGLGEMQTVARDVGSLNK
                     VLSGTKTRGIMGELQLGQIIEDILTPSQYEREFATVSGSSERVEYAVKLPGRTEGDYI
                     YLPIDSKFPLADYYRLEDAYESGDKDQIDLHRKNLLAAIKRFAKDIQSKYLNPPETTN
                     FGVLFLPTEGLYSEVVRNPIFFDELRRQENIVVAGPTTLSALLSSLSVGFKTLNIQRS
                     ADDISKVLGNVKLEFGKFSDLLLKAQKQLNQASSNIDKLLTTRTNAIERSLRTIDLYE
                     DDQTKGLLGLSPLDEEDNEN"
     gene            complement(4010..4642)
                     /locus_tag="U1021_001485"
     CDS             complement(4010..4642)
                     /locus_tag="U1021_001485"
                     /EC_number="2.7.6.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine diphosphokinase"
                     /protein_id="HEM4712017.1"
                     /translation="MIKIAVIAGGSFDCLPEPADLYVGVDAGSLRLLDHFLPLDWAIG
                     DFDSVTSEELGQIREMAEWFLRAPVEKDDTDLELALKEIFKAYPQAQVRIYGALGGRM
                     DHMMANLFLAAEPDLAAFMEQIELVDSQNIVRFRPAGQHRLSPIAGMKYISFMPSDQS
                     RLTIRHAKYPLDASNYFFKKCYSSNEFIDRDIDIQLDQGYVVLIYSKDKD"
     gene            complement(4635..5294)
                     /locus_tag="U1021_001486"
     CDS             complement(4635..5294)
                     /locus_tag="U1021_001486"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002893879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEM4712018.1"
                     /translation="MSHYKIAPSILAADYANFEKELKRLEKTGVEYVHIDVMDGHFVP
                     NISFGADVVAAMRPHSKLVFDCHLMVSNPENHIEGFARAGADILTIHAEATVHLHGTL
                     QKIRAAGMKVGVVINPGTPLVTIEPVLNLVDQVLLMTVNPGFGGQAYIPEVAEKIEGL
                     VKLRENKGLNFDIEVDGGIDDKTIHSAKNAGANVFVAGSYLFKGDLDANVAKLRAALN
                     D"
     gene            complement(5309..6184)
                     /gene="rsgA"
                     /locus_tag="U1021_001487"
     CDS             complement(5309..6184)
                     /gene="rsgA"
                     /locus_tag="U1021_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEM4712019.1"
                     /translation="MQGRIIKALAGFYYVEADGQIYQTRARGNFRKKGQTPYVGDFVD
                     FSAEENSEGYILKIHERKNSLVRPPIVNIDQAVVIMSAKEPDFNANLLDRFLVLLEQK
                     DMDPIIYISKMDLVEDRAEMDAFKAIYEKIGYPFVYSLEELTPLLQDKVTVFMGQTGV
                     GKSTLLNRIAPELALETGAISDSLGRGRHTTRAVSFYNVFGGKIADTPGFSSLDYEVK
                     EAEALTDCFPEIAEASQDCKFRTCTHSHDPDCAVKEAVASSAISQSRFDNYLQFLSEI
                     QNQRETYTKVSKKFK"
     gene            6309..6390
                     /locus_tag="U1021_001488"
     tRNA            6309..6390
                     /locus_tag="U1021_001488"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6342..6344,aa:Leu,seq:cag)
     gene            complement(6697..7245)
                     /locus_tag="U1021_001489"
     CDS             complement(6697..7245)
                     /locus_tag="U1021_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEM4712020.1"
                     /translation="MISLAIILILAWSFYIGYSRGLVLQAFYSMGSIIALVVATATYK
                     KLASFLYLWVPFANATQGSSNYYFDEKYLFDLDMVFYAGLAFLLIYVLVYAIVRFIGI
                     FVHLLEAFNPDTKTTNLISGALAVLVTFISLQIVMVLLSTIPLAMIQDKLHSSFLANI
                     MIQYTPFTSSFLKSLWLSNIAG"
     gene            complement(7242..7553)
                     /locus_tag="U1021_001490"
     CDS             complement(7242..7553)
                     /locus_tag="U1021_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712021.1"
                     /translation="MANLNRYKFTFGEKQLTLTTEHDNLFMEEIERIAQEKYQAIKEK
                     MPTADPETLALLLAINALSVQLTREMAFEQKEQELASVKEKVLKKNVTLIDLDELEDK
                     V"
     gene            complement(7611..8324)
                     /gene="treR"
                     /locus_tag="U1021_001491"
     CDS             complement(7611..8324)
                     /gene="treR"
                     /locus_tag="U1021_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose operon repressor"
                     /protein_id="HEM4712022.1"
                     /translation="MKKYQEIYNDLKEKIRTNVYPAESSLPTEQQLQELYGVSRDTVR
                     KALAILTEGGLIQKVQGRGSMVLKQEILNFPVSGLTSYQELTNVLQLSTKTDVVSLDM
                     ITVNSSLSHLTGFETYSKVWKVVRTRSIDGKVSVVDTDYLAVDVVPELTTAIAEKSIY
                     EYLENKLGLDIAYAQKEITVEPTSREERDLMQIQDDYLVLIKSRVYLGDTRQFQYTES
                     KHKIDKFRFVDFARRKHSL"
     gene            8557..10552
                     /gene="treP"
                     /locus_tag="U1021_001492"
                     /pseudo
     CDS             8557..10552
                     /gene="treP"
                     /locus_tag="U1021_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636547.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system trehalose-specific EIIBC component"
     gene            10633..12258
                     /gene="treC"
                     /locus_tag="U1021_001493"
     CDS             10633..12258
                     /gene="treC"
                     /locus_tag="U1021_001493"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HEM4712023.1"
                     /translation="MTIDKRKVVYQIYPKSYKDTTGNGVGDLRGIIEKLPYLKELGID
                     MIWLNPFYPSPQRDNGYDISDYTAVNPDFGTMADFEEMVAVGKELGIEFMLDMVLNHC
                     STEHEWFQKALAGDKYYQDFFILRDQPTDWVSKFGGNAWAPFGDTGKYYLHLFDVTQA
                     DLNWRNPHVREELFKVVNFWKDKGVKGFRFDVINLIGKDEVLEDCPINDGKPAYTDRP
                     ITHDHLMMMNKATFGSEKGFMTVGEMSATTIENCILYTAPEREELSMAFNFHHLKVDY
                     KDGQKWTIMDFDFEELKRLFHTWGEEMSVGNGWNALFYNNHDQPRALNRFVDVKNFRN
                     EGATMLAASIHLSRGTPYIYMGEEIGMIDPDYDSMDDYVDVESINAYQMLLDQGHTPE
                     QAFKIIQAKSRDNSRTPMQWDASDNAGFSTGTPWLKAGKSYPTINVEQEKTGPIFTFY
                     QALIRLRKELPLISEGDYKAAYKDRQKVYAFERLLNDEKLLVLNNFFAEEVELDLADE
                     YARGQVLISNYPDNKLGKKITLKPYQALAILVK"
BASE COUNT         3485 a         2956 c         2614 g         3390 t
ORIGIN      
        1 caggttaagc cctagcatac aaacaacaaa aaacctctca tcaagagagg cttaacgatt
       61 aatcaaaaat attccccaac tctacatcga ctcgattttc cttgacattg atgtcggtca
      121 cagcgagcaa agacttgtag ttagctacgc tacggtcccc tttttggttt tctgcaaaga
      181 cagccacgcc taccaaggtt gagtcaaact cagagagcag gctaatcata ccattgatgg
      241 tgccaccatt tttcaagaaa tcatcgacga tcaagacacg gcttcctgcc ttcaaactac
      301 gcttagacag gaacatcttt tcgatgcggt cgctagatcc tgacacatag ttgacagaaa
      361 cagtagagcc ttctgtgatt ttcaaatcac gacgcacaat aacaaacggt acattaagga
      421 cattggcaac agcattggcc aagggcacac ctttggttgc aaccgtcatc actgcatcaa
      481 ttttttcatc tttaaaagcg tcagctatga tacgaccgac atttttcaaa atatgtggtg
      541 tagacagcaa gtcagatgaa tagatataac cgcctggcaa gatacgatta ctttcggcca
      601 tctgatcacg aagggcctgt gcaatttcga cagactctgc cttagagatt gatggagtaa
      661 aaacaactcc tccactggca ccagtaatgg tttcaatatg cccgatagag ctttcctcaa
      721 aagccttttt aatgatggca atatcctctg agatagacga cttggcagat tcatactttt
      781 ccgcaaaggt attcaaacta gttaattcat aagggtggtt gatgaggtaa ttggaaatga
      841 caaccatacg ctcacttctt cttaatttca tattgttctc ctttttggct ttttcctatt
      901 atagcacata aaaacacaaa aagcgaacct ttttttcttg aaaaagttcg ctttttcgta
      961 tttagctata aacttgtaga taccacgttg gaatccagcg agtaaagtcc gcataccatt
     1021 ctgagatggt ggccgcctgt tcctgcatca aggggatttg gaggggatct acgcgctctg
     1081 cccaagaaag agcgcctaga ctatttactg ttacataaag agccatgagt ctccaaaatt
     1141 cctctggaat agcgccgtca aaataggcat ctacctgacc acgcgcaaag gctggagaca
     1201 aatctgccgt gaaaatcaaa cggttgaatt cttcccaggg atctcctata tcatgtcgat
     1261 caaagtctaa aattttcagt cttccattct ggccccgtag aaagttccct gtatgaaaat
     1321 caccatgatg gtaggcaatt ggtcttccct caagcaagtg acgattagcc tgaacaaagt
     1381 ctatcatagc ctgaacattt ggataggaat gactagctac ttggtaggca gctaatttac
     1441 tgtcaatctt agcctgataa aaactgttcc agtcccgttg gctttggtca atcggtaggg
     1501 catgcaaggt tcgcaaaaac tgccctgact gacagcccaa atcatataag acagaatcag
     1561 acaaactaga agccacttca ttcatatcct gaccctccac ccattcataa agggtgtaga
     1621 ctgacaagtc atccgcccaa aaacttagtg gctctgccac aggcaaacct aaaccaaaca
     1681 ggtgttcaac taattgaaac tctaatcgct tagcctcata ggctggccgc tctgctattc
     1741 tcaacagacc aaggcgacca tcttctagct gaacctggta cttttggtcc gtggaccagc
     1801 cttttgtgag gctctcacgt gcgactatct tcacggtcat cagtctaggt ttggcttgta
     1861 gaaggcacgg ttatccatgg caaagatgcg gttggtcatc tcgcctgggc caaccttgtc
     1921 caaggccgat agcatcatca tcatttccgc atcgatgttg tcaatcatgt ggaggatttc
     1981 cgcctccata atctgcggac ggacagggct tccatactcc aagaggccat ggtggctgag
     2041 gataacgtgg cgcagaacag tcacttcctc cagactgtca tcgatgccca attccatcaa
     2101 gaccttggta atctcttcat caatcaagga aatgtgccca atcagattgc cacggacagt
     2161 gtagcctgtg ttatcagggc ctgtcagttc aatcaccttg gctaggtcat gaagcataat
     2221 tcctgcgaaa agcaggctct tgttgagctg aggataaata tcaccaattt tatctgccaa
     2281 acgcaccata gtcgccgtgt gataggacag accagaataa aaagcgtggt ggttgatctt
     2341 ggcagctgga taggaataaa attccttgtc gtacttgctg tagagagcac ggacaatccg
     2401 ctgccaagtg gcattttcaa tgcggaaaat catctggctc aaatagtcct tggtgtcctt
     2461 gacatccaca ggtggttttt ccttgaaatc agcagggtcg ttgggttcgc ctgcctttgg
     2521 caaacgcaga accagttgat tgacctgggg ggtgttgttg taaacctcac ggcgcccctg
     2581 catgtgaaca actgtcccag cagtaaagtc cttgattttc cctggttgag catcccagac
     2641 cttgccttca atctcgcccg tatcatcctg gaaggtcaga gctaggtagt cttttccagc
     2701 ccgtgtttga cggacttcag ctgtcttgat cagatagaat ccttcgaaga attcatcttt
     2761 tttcatttgg ttaattttca ttatcttcct catctaatgg ggacaggcca agcagtccct
     2821 tggtttggtc atcttcgtat aggtcaatgg tccgaagact acgctcgata gcgttggtgc
     2881 gagtggttag gagtttgtca atattgctgc tggcttgatt gagttgtttc tgagccttaa
     2941 gcaagaggtc agaaaacttg ccaaattcca gcttgacatt gcccaagact ttggaaatat
     3001 catcggccga ccgttgaatg ttgagggtct taaagccgac ggagagggaa ctgagcaggg
     3061 cagacagggt ggtcggtcca gctaccacga tattttcctg acgacgaagc tcatcaaaga
     3121 aaatgggatt gcggaccact tctgaataga gtccctcagt tggcaagaac aacacaccaa
     3181 aattagtcgt ttcaggcgga ttgaggtact tgctctgaat atctttagca aagcgcttga
     3241 tagcagccaa gagatttttg cgatggaggt caatctggtc cttgtcccca ctttcgtagg
     3301 catcttccaa gcgataatag tccgccaacg gaaacttgga atcgattggc aagtagatat
     3361 agtctccttc cgtccgtcct ggtagcttga ccgcatactc cacgcgctca ctagagcctg
     3421 aaactgtggc aaactctcgc tcatattggc taggtgtcaa aatatcctcg ataatctgtc
     3481 ccagctgtaa ctcacccatg atgccacggg ttttggtacc agacagaacc ttgttcagac
     3541 tgcccacatc acgtgctacc gtctgcattt cgcccagacc acgattgacc gattccaatt
     3601 gcttggacac cgtttcaaag gaggcttgta ggcgggtttg cagggttttc tccagctttt
     3661 cctcaaccgt ctgccgcatt tcttctaggc gtttttcatt agactcctga atggcctgca
     3721 aacggcggtc ggtggcatct cgcgtttcca agtggctctt attcagctct tgacggatgt
     3781 cggttagctg ttggtaaagc tccgtgcgga gtctttccac ctcctgatga atggcttgct
     3841 gctgtttgag agttgcgtta tctagttgat agctgagctg gtcagacaag ttgtctgctg
     3901 tatcttcggc ttgatcttgc aaaagcaggg ccaagctctg ccattttcca taaagaaaaa
     3961 ccaaggcaag caagaccagt atcagcaaaa taagtaatac aatatccatc taatccttgt
     4021 ccttactgta gatcaggacc acgtagccct gatccagttg aatgtctata tctctatcta
     4081 taaattcgtt agaggaatag cattttttga aaaaataatt gctggcatcc agcgggtact
     4141 tggcatgacg aatggtcagg cgactctggt ccgacggcat aaaggaaatg tacttcatac
     4201 cagcaatcgg tgacaaacgg tgctgacctg caggtcgaaa tcggacgatg ttctgactgt
     4261 ccaccaattc gatctgctcc ataaaggcag ccaagtcagg ctctgcagcc agaaagagat
     4321 tggccatcat gtggtccatg cggccaccca aagctccata tatgcgaacc tgggcctgcg
     4381 gataggcctt gaagatttcc tttaaagcca gctccaaatc tgtatcatct ttttcaacag
     4441 gagctcgcag aaaccactct gccatctccc ttatctgccc caactcctca gaggtcaccg
     4501 agtcaaaatc accgatagcc cagtcaagag gcagaaaatg gtccagaaga cgaagagagc
     4561 ctgcatctac ccccacatag aggtcggcag gctcaggaag gcagtcaaag gaaccgcctg
     4621 caatgacagc aatcttaatc attgagggca gctctcaatt tggcaacgtt ggcatccaaa
     4681 tcgcctttga agaggtagga accagccaca aagacattgg cacccgcatt tttggctgaa
     4741 tgaatggtct tgtcgtcaat cccgccgtcc acttcaatat caaagttcaa acccttgttt
     4801 tcacggagct tgaccaagcc ctctatcttc tccgccactt ctggaatgta ggcttgtcca
     4861 ccaaaacctg ggttgaccgt catgagcaga acctgatcca ctaagttgag cacaggctca
     4921 atggtcacaa gcggtgtacc tggattgatg acaacaccca ccttcatacc agctgcacga
     4981 attttttgca gtgttccatg caggtgaacc gttgcttctg catgaatggt taaaatatct
     5041 gcacccgcac gggcgaagcc ttcgatatga ttttcaggat tggacaccat aagatggcaa
     5101 tcaaaaacca gcttgctatg aggacgcatg gccgcaacca catccgcccc aaagctgata
     5161 tttggcacaa agtgaccatc catgacatca atgtgcacat actccacacc tgtcttttct
     5221 agacgcttga gctctttttc aaaatttgca taatctgccg ccaaaataga cggggcaatc
     5281 ttataatgtg acatagagta ccaactttct atttgaattt cttacttacc ttggtatagg
     5341 tttcacgctg attttggatt tcgctgagga attggagata attgtcaaag cgactttggg
     5401 aaatggcaga gctggcaaca gcttccttga ccgcacaatc cggatcatgg gaatgggtac
     5461 aggtcctaaa tttgcagtcc tgactggctt ccgcaatctc tggaaaacaa tctgtcagag
     5521 cctccgcctc cttgacttca tagtctaggg atgaaaaacc tggcgtatcc gcaattttcc
     5581 caccgaagac attgtagaag ctgaccgcac gagtggtatg gcgaccacgc cccagactat
     5641 ctgaaatcgc ccctgtttcc aaggctaatt ctggtgcaat gcggttgaga agagtcgact
     5701 tgccaacccc tgtctgcccc ataaagaccg tcaccttatc ctgcaataat ggcgtcaatt
     5761 cctccaaact atagacaaaa ggatagccaa ttttctcata gatagccttg aaggcatcca
     5821 tctccgcccg atcttctacc aaatccatct tagagatata gataatggga tccatatcct
     5881 tctgttcaag gagaactagg aaacgatcca gtagattggc attaaaatca ggttccttgg
     5941 ccgacatgat aaccaccgcc tgatcgatat tgacgatagg aggtcgaacc aaactatttt
     6001 tccgctcatg aatctttaat atatagcctt ctgagttttc ctccgcagaa aagtccacaa
     6061 aatcacccac gtagggcgtt tgtcccttct tacgaaaatt tcctctggct ctggtttgat
     6121 aaatctgtcc atccgcctcg acatagtaaa aacctgccaa ggccttgata attcttcctt
     6181 gcaatgaaga ctcctttgtg tgtacttgct actattatac caaatttcct acaaaaaaac
     6241 cgcaagcggt ttcgatttta cattttcctc tagtcatttc aatgtaaaaa tagtataata
     6301 aaaagcaagc ggaggtggtg gaacggcaga cacgcatgct tcaggcgcat gtgcccatcg
     6361 ggtgtgaggg ttcaaatccc ttcctccgca ttatttataa aggataactc caagtcaaag
     6421 ttgatgactt gggggcattt ttatatcttc tcgctcatac tcaatgaaaa tcaaaaacag
     6481 actagctcca aaggttttgg aaacctttgg aggttggaaa tagagcgaac gtagttcgtt
     6541 tctacttacg cagatagaac cctgttacta ttttgtttca aggtaacagg ctgaaaggct
     6601 ccactggagc cttccactca tcaaatcaag tcaacaatgt ctgattttga ttttcgaaga
     6661 gtatcataaa tgacgataaa aaggataagg tctcccttac cctgctatat tactcaacca
     6721 gagagatttt aaaaagctac tagtgaatgg tgtgtactga atcatgatgt tggcaagaaa
     6781 actactgtgc aatttatctt gaatcatcgc taacggaata gttgatagca agaccatgac
     6841 aatctgaaga gaaataaaag tcaccaagac agccaaggcg ccgcttatga gattagtcgt
     6901 ttttgtatca ggattaaaag cctctaatag atggacaaat attcctatga aacgcacaat
     6961 agcataaacc aagacgtata tcaaaagaaa ggccaatccc gcataaaata ccatatctag
     7021 gtcaaagaga tatttctcat caaaataata gttggagctc ccctgagtag cattggcaaa
     7081 tggcacccag agataaagga aggatgccaa ttttttataa gtagccgtcg caaccaccag
     7141 agcaataata cttcccatgc tataaaaggc ctgtagaact agaccacgac tgtagccaat
     7201 gtagaaactc catgccaaaa tgagaataat tgctaatgaa atcatacctt gtcctcaagc
     7261 tcatctaagt caatcaaggt cacattcttt ttcaagacct tttctttgac gcttgcaagt
     7321 tcttgttcct tttgttcaaa tgccatctcg cgcgttagtt gaacggatag agcattgatt
     7381 gccaacaaaa gcgcgagggt ttcagggtcc gccgtcggca tcttttcttt gatggcttgg
     7441 tatttttcct gtgcaatacg ctcaatctct tccatgaata aattatcatg ctcagttgtc
     7501 aaggttaatt gcttctcgcc aaatgtaaat ttatatcgat ttaagtttgc catatcttac
     7561 ctcttcttct atctattata gcgtaaaaaa cttgatttgg ctaatctctc ctataaagaa
     7621 tgctttctac gagcaaaatc tacaaagcgg aatttatcaa tcttgtgctt actttcagtg
     7681 tattgaaatt gtcgcgtatc tcctaagtag accctggatt ttatcaacac cagataatca
     7741 tcctgaatct gcatcaaatc tcgttcttct cgactggtcg gctctaccgt aatctctttt
     7801 tgtgcataag caatatcaag gcctaactta ttttctaggt attcgtagat ggatttttca
     7861 gcaatagcag ttgtcaactc tggcacgaca tcgacagcaa gataatctgt atccacaacg
     7921 gagaccttac cgtcaatcga acgtgtacgg acaactttcc acaccttgct atacgtctca
     7981 aagcctgtca aatgcgaaag gctactatta acggtaatca tatctaagct gacaacatct
     8041 gtcttggtag aaagctggag aacatttgtc aattcctgat aggaagttaa acctgaaact
     8101 gggaaattga gaatttcttg cttaaggacc attgaaccac gcccttgcac tttttgaatc
     8161 aaacctccct cagtcaaaat cgccaacgcc ttacgaaccg tatcacgact aacaccatag
     8221 agttcctgga gctgctgttc tgtcggtagg gagctttctg ccggataaac atttgtccgt
     8281 attttttctt ttaagtcatt ataaatttct tggtattttt tcatcatttc ctcgcaaatt
     8341 catctgtcaa ataacataca actatcaaca ttataacaaa attcatttca aaattaaaaa
     8401 aactaagcaa aaacgcttgc attatttttt gaaatcggat acaatgataa cacaaaagaa
     8461 atttgtccgt acaaatttca aaaaaggaca tacttagaga gatgcctaaa aaatataggg
     8521 cgacagattc cataagctgt ctagaaggaa aaatatatgg gaaaatttga aaaagaagcc
     8581 aaacagctct tggacgctat tggcggaaaa gaaaatgtta acgcagttac tcactgtgca
     8641 acacgcatgc gctttgttct tgcagatgag aaaaaagcaa acgtaaaagt catcgaagac
     8701 attccagcag taaagggaac ctttaccaac gctggtcagt tccaagtcat cattggtaac
     8761 gatgtaccaa tcttctacaa tgactttaca gctgtgtctg gtatcgaagg cgtatcaaaa
     8821 gaagctgcta agtcagccgc taaaagtaac caaaatgcta tccaacgtgt tatgactatg
     8881 ttggctgaaa tcttcacacc aatcattcct gcccttatcg tcggcggttt gattctcggt
     8941 ttccgtaacg tcttggaagg tgttcagatg gaatggcttg gacaagctat gaaagatggg
     9001 cagttggtct tcgatgctga tggtaaccct gtatggaaca ccattgttca ggtttctcct
     9061 ttctggaatg gtgtcaatca cttcctctgg ttgccaggtg aagccatctt ccacttccta
     9121 ccagtaggta tcacttggtc cgtatctcgt aaaatgggaa cttctcaaat ccttggtatc
     9181 gtccttggta tctgtttggt ttctccacag ttgctcaacg cttatgctgt acctggtaca
     9241 gatgcagcaa ccattgccag cgactggtct tggaacttcg gtgcatttag tattgcccgt
     9301 atcggttatc aagcacaagt tatccctgcc ctccttgctg gtttggcact gtcttaccta
     9361 gaaatcttct ggcgtaaagt gattccagaa gtggtatcta tgattttcgt accattccta
     9421 tcacttcttc ctgccatcat cttagctcac actgtccttg gtcctatcgg ttggacaatc
     9481 ggtcaatggt tgtcaactgt cgtattggct ggtttgacag gcccattgaa atggctcttc
     9541 ggtgctgtat tcggtgccct ttatgcacca ttcgttatca ctggtcttca ccacatgaca
     9601 aatgccatcg atacacaatt gattgcggat gctggtggaa ctggtctctg gccaatgatt
     9661 gctctttcta acattgctca aggttctgcg gtatttgctt acttcctcat gaaccgtcac
     9721 aatgaaaaag aagcgcaagt ttcacttcct gcaactattt ctgcttatct tggtgttact
     9781 gaaccagccc tctttggtgt caacgtgaaa tacgtttacc cattcgtagc ggctatgatc
     9841 ggttcaagta tcgctggcct actttctgta accttcaaca tccaagctgc ttctatcggt
     9901 atcggtggtc ttccaggcat cttgtctatc aaggctgaat actggggtcc attcttgcta
     9961 gcaatggtag ttgcgattgt tgtcccaatg attttgacag ctgttttcaa acgtacaggt
    10021 gcattttcaa aaaaaagaag aaactgttga agaagttgta gctccaactg aagcagttgt
    10081 tgaagctggc gctgctatcg aattgattag cccgcttact ggtcaagcaa aagaattgtc
    10141 acaggcaact gaccctgtat ttgcatcagg tgtcatggga caaggtgtcc ttatcgatcc
    10201 tagcgaaggc atcttagttg cacctattga cggtgaagta tctgtcctct tccctactaa
    10261 ccacgctgtt ggtatcactg ctacaaacgg agttgaactc cttatgcaca tcggtatgga
    10321 tactgttgga ttggaaggca aaggtttcac agcccatgtc aaacaaggtg acaaggtaaa
    10381 agctggtgat aaattgatta gctttgacat cgatgtcatc aaggctgctg gtctcgtcgc
    10441 ggaaacacca gttatcgtga ccaaccaaac tgactttgac actcaagtta tcggaaatct
    10501 tcctcgtgcc atctcgcaag gcgaagctat tctgacagtt acaaagaatt aatgttctag
    10561 gagggcgcaa ggtaacttgc acctcctatc attgcttatg caagaaggaa aaatcaagaa
    10621 agagagagca aaatgacaat agacaaacga aaggttgttt atcaaatcta cccaaaatct
    10681 tacaaggata caactggaaa tggtgtaggg gatttacgag gaattattga aaaactacct
    10741 tatttgaagg agctaggcat tgatatgatt tggctcaacc ccttctaccc aagtcctcaa
    10801 cgagacaacg gctatgacat ttcagactat acagccgtca atcctgattt tggcaccatg
    10861 gctgactttg aagaaatggt ggctgtcggt aaagagctgg gcatcgaatt catgctagac
    10921 atggtcctca atcactgctc aacggagcat gaatggttcc aaaaagccct agcaggcgac
    10981 aaatactacc aagatttctt tatcctgcgt gaccagccaa ctgactgggt gtctaagttt
    11041 ggcggcaatg cctgggctcc ctttggagat actgggaaat actacctcca cctcttcgac
    11101 gtgacccaag ccgacctcaa ctggcgaaat cctcatgtcc gtgaagaact gttcaaggtg
    11161 gtcaacttct ggaaagacaa gggtgtcaag ggcttccgct tcgatgttat caacctgatt
    11221 ggtaaggacg aagtcctcga agactgccca atcaatgacg gcaagcctgc ttacaccgac
    11281 cgcccgatca cccacgacca cctcatgatg atgaacaaag ctacttttgg tagcgaaaaa
    11341 ggcttcatga ccgtcgggga aatgtctgcc accaccattg aaaactgcat tctctacacg
    11401 gctcctgaac gggaagaatt gtccatggcc ttcaacttcc accacttgaa agtggactac
    11461 aaggacgggc aaaaatggac cattatggac tttgactttg aggaactcaa acgcctcttc
    11521 catacttggg gggaagaaat gtccgtcgga aatggctgga atgccctttt ctacaacaac
    11581 cacgaccaac ctcgtgccct caaccgcttt gtcgatgtga agaatttccg caacgaagga
    11641 gcaaccatgc tggcagcctc tatccacctg tcacgcggca cgccttacat ttacatgggc
    11701 gaggaaatcg gcatgattga ccccgactac gacagcatgg acgactatgt cgatgtcgag
    11761 tctatcaatg cctaccagat gctcttggat caaggccaca cacctgagca agcctttaag
    11821 attatccaag ccaagtcccg tgacaattcc cgcaccccga tgcaatggga cgcttctgac
    11881 aatgcaggct tctcaacagg aactccttgg ctgaaagctg gcaaatccta tccaaccatt
    11941 aacgttgaac aggaaaaaac aggcccaatc tttaccttct accaagcact catccgcctg
    12001 cggaaagaac tccctctgat ttcagaaggg gattacaagg ccgcctacaa ggacagacag
    12061 aaagtctatg cctttgagcg tttactaaac gatgaaaaat tactggtcct aaacaacttc
    12121 tttgcagaag aggttgaact agacctggca gacgaatatg cccgtggtca agtcctcatc
    12181 agcaactatc ctgataacaa actcggtaag aaaattaccc tcaagcctta tcaagcactg
    12241 gcgattttgg ttaaataaac gataaaacat ccgaaaataa cactctacat gtcaatttta
    12301 attttcctaa aattagaacc tgccttcaca gctcagtagg ttacttgtga aggcaagttc
    12361 ttggtttaag gtttctttta ggaatatatt ttataatgta gtttacgcac gaaacagcta
    12421 tctggggggg gagatagttg tttct
//
LOCUS       DASFQD010000072        12381 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.072, whole genome shotgun sequence.
ACCESSION   DASFQD010000072 DASFQD010000000
VERSION     DASFQD010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 12381)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12381)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12381
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.072"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(45..1157)
                     /gene="glf"
                     /locus_tag="U1021_001494"
     CDS             complement(45..1157)
                     /gene="glf"
                     /locus_tag="U1021_001494"
                     /EC_number="5.4.99.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HEM4712024.1"
                     /translation="MKKYDYLVAGAGLFGAVFAHEAAKKGKKIKVIEKRDHIAGNIYT
                     KEVEGIQVHEYGAHIFHTSEREIWDYVNQFAEFNRYTNTPVANYKGEIYNLPFNMNTF
                     NKLWGVVTPAEAEAKIAEQRAVLGGKTPENLEEQAISLVGTAIYEKLIKSYTEKQWEK
                     PCTELPAFIIRRLPVRLTYDNNYFNDTYQGIPIGGYTQIVEKMLEHENIDVETNVDFF
                     ANKEDYLADYPKIVFTGMIDEFFDYQLGELEYRSLRFETEVLDMENYQGNAVVNYTDS
                     ETPYTRIIEHKHFEFGTQDKTIITREYSKTWKRGDEPYYPVNNDRNNKLYTAYKRLAE
                     QQENVIFGGRLGHYRYYDMHQVIGVALQCVRNEVGE"
     gene            1383..1645
                     /locus_tag="U1021_001495"
                     /pseudo
     CDS             1383..1645
                     /locus_tag="U1021_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558050.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
     gene            complement(1720..3078)
                     /gene="rlmD"
                     /locus_tag="U1021_001496"
     CDS             complement(1720..3078)
                     /gene="rlmD"
                     /locus_tag="U1021_001496"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HEM4712025.1"
                     /translation="MLKKNDIVEVEVVDLTHEGQGVAKIDGFVFFVDNALPGEKISMR
                     ILKLKKNIGFGKVEQWQSFSPDRNQDLDLTYLRTGIADLGHLTYPAQLAFKKKQVENS
                     LRKIAGISEIAVADTLGMDNPLAYRNKAAVPVRRVNGQLETGFFRKNSHDLVPIEDFY
                     IQHKEIDALVLATRDLLRKLDLKPYDEKEQTGLVRNIVVRRGHYSGQLMLVLVTTRPK
                     IFRVETLIERLTSQFPNLVSIVQNINDQNTNAIFGQEFRLLHGSETITDTMLGNEFEI
                     SAPSFYQVNTEMAEKLYQTAIDFAELSADDVVIDAYSGIGTVGLSFAKQVKHVYGVEV
                     VEKAVLDSQKNAARNGIDNVTYVCDSAESAMQKWVADGVKPTVIFVDPPRKGLTESFI
                     KASTSVKPEKIVYISCNVATMARDIKLYEELGYKLTKVQPTDLFPNTHHVEVVSLLEK
                     RN"
     gene            complement(3145..4467)
                     /locus_tag="U1021_001497"
     CDS             complement(3145..4467)
                     /locus_tag="U1021_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000032347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HEM4712026.1"
                     /translation="MNKNNNILTHHEQLRLDYLQKNIHYLNDKESRELDYLLYKKELR
                     ERHGSPRQSLRSFTPTAYEDDFEEDYFEEDDEQEELLPRYPERKSRKTRQAKPQRFQS
                     PRIEPKVKVPKPKKARKKGGFKRFIGFVLLAIALVIVAMGYSFFKGMNSVSEKPVAEV
                     FNGVDTSNGTNILILGTDGRVGESSGETRTDTIMVLNVNNTDNKVKLVSFMRDTLVDI
                     EGYEYKLNTAYTLGEQDNQQGAEEVRKALKNNFDIDIKYYAMVDFATFATTIDTLFPE
                     GVTIDAQFSTINGEVVSSVEVPNDLQLEENAPAYQTIQVGVQQMDGKTLLNYARYRSD
                     DEGDFGRTRRQQEVLSAVMTQAKNPMKLFSGSEAIGKVVAMTPTTVPQSFMWLQGPGL
                     LLDAANGIERVTIPENGDWIDDYDMYGGMALRVDFEKYQQRLAELGLR"
     gene            complement(4479..5306)
                     /gene="pheA"
                     /locus_tag="U1021_001498"
     CDS             complement(4479..5306)
                     /gene="pheA"
                     /locus_tag="U1021_001498"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEM4712027.1"
                     /translation="MQVAYLGPRGSFTHQVAQQAFPSADLQAFETITEVIKAYETGEV
                     TYSVIPVENSIEGSVHETIDYLFHQAEIHAVAEIVQPIAQQLLATSADKAVEVIHSHP
                     QAIAQGKKYIQEHFPQARIEITASTAYAARFVAEHPEQPFAAIAPQAAAVEYGLEVIA
                     QDIQEISENFTRFWILGDKAPSIALEQVAKKVSLALTLPDNLPGALYKAMSVFSWRGI
                     SLTKIESRPLKTALGEYFFILDLDNQSEELLAYSQKELTSLDITYKVLGNYLVYMTS"
     gene            complement(5297..5788)
                     /locus_tag="U1021_001499"
     CDS             complement(5297..5788)
                     /locus_tag="U1021_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEM4712028.1"
                     /translation="MPIVLLGFMGVGKTTTAHLLNLPVYDMDHIIEERIGMPIADYFS
                     LEGEASFRQLETEVLKELLDLPSNCIVSTGGGVIKSEVNRELLLANREDNVLLTASFE
                     VSYQRIRKDRQSQRPLFLQCSKEEFEALYRERMALYQGLADTVIDTDKLNPEQVARKI
                     LCK"
     gene            complement(5797..7077)
                     /gene="aroA"
                     /locus_tag="U1021_001500"
     CDS             complement(5797..7077)
                     /gene="aroA"
                     /locus_tag="U1021_001500"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEM4712029.1"
                     /translation="MNLRRSVEKLKGTIRVPGDKSISHRSIIFGSLAKGVTRVHDILR
                     GEDVLSTMQVFRDLGVKIEDNGDIVEVHGVGFDGLQAPKNDLDMGNSGTSIRLISGVL
                     AGQDFEATMFGDDSLSKRPMDRVTIPLSQMGVEISGQTERDLPPLTIKGNKNLKPIRY
                     QLPVASAQVKSALIFAALQAEGESVIVEKELTRNHTEDMIVQFGGQLEVNGKEIRIQG
                     GQEFIAQEITVPGDISSAAFWLVAGLIVPGSKIVLENVGINETRTGILDVIKAMGGKM
                     TLSNIDELAKSATITVETSELKATEIAGELIPRLIDELPIITLLATQAHGTTIIRDAE
                     ELKVKETDRIQVVADALNSMGATIEPTEDGMIIHGPTALHGAEINTFGDHRIGMMTAI
                     AALLAKDGEVVLERAEAINTSYPAFFEHLNSLMD"
     gene            7292..7657
                     /locus_tag="U1021_001501"
     CDS             7292..7657
                     /locus_tag="U1021_001501"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEM4712030.1"
                     /translation="MYYGRDTEIEELKQHFKFSSNDKNSLYIINGLSGSGKTELIKEV
                     CQQVYSHDKEAFILYIDVTNDGFESNKFFENLLKGAYVPTQFRRNLCLSIPQKYSFSN
                     YLRKQKLTNLTLKHSIVLG"
     gene            7951..9576
                     /locus_tag="U1021_001502"
                     /pseudo
     CDS             7951..9576
                     /locus_tag="U1021_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000371067.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
     gene            complement(9560..10801)
                     /locus_tag="U1021_001503"
     CDS             complement(9560..10801)
                     /locus_tag="U1021_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007520187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEM4712031.1"
                     /translation="MYKINKFEGEIYQKLNKILDSYNQEQNSLINLAACISYPFTEVL
                     KIQSFPLATLPTEGAVEKRFFPHCTSLDNIEVYSEELCLQLFDLNPGDYRVNVQPHSG
                     TQANQIVYNCVLERDDYILSLSPKDGGHISHTYTGKGTVKYYHLDHNLNIDYIELKEL
                     LDKYKPKLIIIGASSYGNEFNYQQIYEIIKEVSPNTLILADICHSVLYIMAKLHKSIF
                     PYVDFATFTMDKCLRGPQGGVLLYRSIFEEKITNSIFPRTQGGPTQTALFAKCICLIK
                     LLSIDIQDYAKQIIKNTLLFIKQLSKEGVDVVYKKPKTHIILVNLLNLNLSGKEAENL
                     LFQHKILVNRNQIPNDTHGPMTTSGMRLGTVGITNLSYTDEDIKKLAKLVANLLKYKQ
                     YDYSIYLDLIHKYHEQINISN"
     gene            10897..11793
                     /locus_tag="U1021_001504"
     CDS             10897..11793
                     /locus_tag="U1021_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000384879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEM4712032.1"
                     /translation="MNYDTIQRYLDFCAIQRRLSSHTIRAYKSDLHQYYNFGTNDIRS
                     YLTFLNQHIKKTSTLKRKIASLKSYYKFLEEEKLISKNPFHQLRLHYKEEKKLPKTIS
                     LKDLQKIYCFAHQQIENSKNKHSMRKAMRNLLLISLLLSTGLRISELCNLKLDNINLE
                     NRTIQILGKGKKERLLYIGNDETLSLLEDYIAHHCSHSSYLFTGVKNDDHLKEPSVRL
                     ILKNISHSLQLKKHITPHMFRHSFATMLLDNGVDIRQIQHLLGHSNINVTQIYTHVSQ
                     SKQVEILSEHNPLNQITPLLRT"
     gene            complement(11825..12010)
                     /locus_tag="U1021_001505"
     CDS             complement(11825..12010)
                     /locus_tag="U1021_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712033.1"
                     /translation="MSQLVVSLTIPKSHRFEKKSRNDILMKIRIGKSEVTFFQSINPE
                     VMETILDKVLYYDYPTQ"
     gene            12089..12226
                     /locus_tag="U1021_001506"
                     /pseudo
     CDS             12089..12226
                     /locus_tag="U1021_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558053.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         3941 a         2457 c         2018 g         3965 t
ORIGIN      
        1 aacttctgcc aagaatcaat tactactttg atgacttctc aaaatcattc cccaacttca
       61 tttctcacac attgcaaggc cacaccgata acctggtgca tatcgtagta acgataatga
      121 ccaagacgtc caccaaaaat aacattctct tgttgttctg cgaggcgttt ataagcagta
      181 tagagtttgt tgttgcgatc attgttgact ggataatatg gctcatcgcc tcgtttccag
      241 gtcttcgaat actcgcgggt aataatggtt ttatcttgtg taccaaattc gaaatgtttg
      301 tgttcgatga ttcgagtata tggtgtctcg ctatctgtat agttgacaac cgcattccct
      361 tgatagtttt ccatatccaa cacttctgtc tcaaatcgaa ggctacgata ttccaattca
      421 ccaagttggt aatcaaagaa ttcatcaatc attcctgtaa agacaatctt tggataatca
      481 gctaaatagt cttccttatt ggcaaagaaa tcaacatttg tctccacatc gatattttca
      541 tgttccaaca ttttttctac aatctgcgtg taaccgccga ttggaatacc ttgataagta
      601 tcgttaaagt agttattatc ataagtcaaa cgcacgggca aacgacggat gatgaaggct
      661 ggtaactccg tacacggctt ttcccattgt ttctcggtgt aggacttgat caatttttca
      721 tagatggctg taccaactag tgagatggct tgctcttcta agttctcagg tgtttttcca
      781 cccaaaacag cacgttgctc tgcaattttt gcctctgcct ccgcaggagt aaccacaccc
      841 catagtttat tgaaggtatt catgttgaat ggaagattgt aaatctcacc cttgtagttg
      901 gcaactggtg tgtttgtgta gcggttgaac tccgcaaact gattcacata gtcccaaatt
      961 tccctctctg aagtgtggaa aatatgtgcg ccatattcat ggacttgaat accttctact
     1021 tcttttgtat agatgttacc tgcaatgtgg tctcgttttt cgataacctt tattttttta
     1081 ccctttttag ctgcctcatg agcaaagact gcaccgaaca gcccagcacc tgcaactaga
     1141 taatcgtatt ttttcatatt gtttttacat ttaactttct agggaagtca tttctccaaa
     1201 tcttttacta gactatcatt tataccatcg tctcataacc aataaagaat gagttgtgat
     1261 aatctcttcc ctaaaacctt tcacttaaag cttgcaatat ccaatattat aacagacaat
     1321 acaaccttca tcaagtttag caatagactt gttcggtaac tcaaaggcgg tatactaaag
     1381 gtatggaaac aacatacgaa aaaatcttaa aattaaactc agagaatttc aaattgttga
     1441 tagttgttaa aaaaaagcga cgtttcaact gatgcttgat tgtctcactg acgcttatca
     1501 agagcaacac cgaaaaggag gacatccacg ccgtctaagt atggaagagc agctcatcat
     1561 gaccttgcgc tacttacgct attacccgac tcaatgcttg ttggcatttg attttggtgt
     1621 aggtgtggca actgtcaaca tgatgcgtat ttgagagttc aaaggtcctg cggacctttg
     1681 aagcagcttg ccagaaaaca agagagtaag ctggacaatc taattgcgtt tttctaacag
     1741 actcacaact tcaacatgat gtgtattcgg aaataaatcc gtcggctgta ccttcgtcaa
     1801 tttgtacccc aattcctcat aaagtttaat atcacgcgcc atcgttgcca cattacagga
     1861 gatatagacg attttctctg gttttacaga agtacttgct ttgataaaac tttctgtcaa
     1921 accttttcgt ggtgggtcga caaaaatcac agtcggtttg actccatctg ccacccattt
     1981 ttgcatagcg gattctgcac tatcacagac ataggtaaca ttatcaatcc catttcgagc
     2041 agcattcttc tgactatcaa ggacagcctt ttcaacgact tctacaccgt aaacatgctt
     2101 aacttgtttt gcaaaggaga gaccaactgt cccaatacct gaataggcat caatcacgac
     2161 atcatctgcc gacaattctg caaagtcaat ggcggtctga tagagttttt cagccatttc
     2221 tgtgttgact tgatagaaag acggtgcaga aatttcaaat tcattgccca acatggtatc
     2281 tgtaatagtt tcactgccat gcaaaagacg gaattcttga ccgaatatag cattggtatt
     2341 ctggtcatta atattctgaa cgatagaaac aagatttgga aattggcttg tcaaacgctc
     2401 aataagggtt tcaacacgga aaatcttcgg acgagtcgta actaaaacta gcatcaactg
     2461 acctgaataa tgaccacgac gaacaacaat atttctcaca agtcctgtct gttctttctc
     2521 atcgtaaggc ttcaagtcta attttctcaa gaggtcacgt gtcgctagaa ccaaggcatc
     2581 aatttcctta tgttgaatgt aaaaatcctc aatcggaact aaatcatgtg aattttttcg
     2641 gaaaaatcct gtttctaact gcccattcac acgacgaact ggaacagctg ccttattacg
     2701 ataagcaaga ggattgtcca ttcccaaagt atctgctact gctatttctg aaatgcctgc
     2761 aatcttacgt agactattct caacttgttt tttcttaaaa gctagttggg ctggataagt
     2821 gagatgcccc aagtcagcaa tacctgttct tagataggtc aaatccaagt cctgattacg
     2881 gtctggtgag aagctctgcc attgctccac cttaccaaaa ccaatatttt tcttaagttt
     2941 taagatgcgc atggaaattt tctcgcctgg aagagcattg tctacaaaga agacaaaacc
     3001 atcaattttt gccacaccct gcccctcatg tgtcaaatct acaacttcta cttcgacaat
     3061 atcgtttttc tttaacataa ttctactttc tatttttgga ccactaaaaa agtgaccgaa
     3121 gtcacttcta gtataccata tttcttaacg caggcctaac tcagccaagc gctgctggta
     3181 tttttcaaaa tcaacacgaa gagccatacc accatacata tcatagtcgt caatccagtc
     3241 tccattttct gggattgtaa cacgttcgat accatttgcc gcatccaata gaaggcctgg
     3301 tccctgtagc cacataaagc tttgtggcac tgtggtcgga gtcatggcca caaccttacc
     3361 tatagcttcg gagccagaga atagtttcat tggattttta gcctgtgtca taacagcaga
     3421 tagcacttcc tgttgacgtc tcgtacgacc aaaatcacct tcatcatccg aacgatagcg
     3481 cgcgtagtta agtaaggtct taccatccat ctgctgtaca ccgacctgaa tcgtttgata
     3541 agcaggagca ttttcttcca gctgtaaatc attcggcact tctactgagc taacgacttc
     3601 accattaata gttgaaaact gtgcatcaat cgttacgccc tcagggaaaa gtgtatcaat
     3661 cgttgtcgca aaggttgcaa aatccaccat cgcatagtac ttgatatcaa tgtcaaaatt
     3721 attcttcaac gccttccgaa cttcttcagc cccttgctga ttatcctgtt ctcccaaagt
     3781 ataggcagta ttgagtttat attcatatcc ctcaatatcc accaaggtat cccgcataaa
     3841 gctaacaagt ttgactttgt tatccgtgtt attcacattt agaaccatga tggtatccgt
     3901 tcgagtttca cctgagcttt cgccaacacg accgtctgtt cccaaaatta aaatatttgt
     3961 cccattcgat gtatctacgc cgttgaagac ctcagctact ggcttctcac tcacgctatt
     4021 catacctttg aaaaaactat agcccatcgc tacaatcact agcgctatag caagcaatac
     4081 gaaaccaata aagcgcttga aaccaccctt tttacgtgct tttttaggtt taggcacttt
     4141 cactttgggc tcgatacgag gagactgaaa ccgttgaggt ttggcttgtc ttgtttttct
     4201 ggatttacgt tcaggatagc gaggcaacag ttcctcttgc tcatcatcct cttcaaaata
     4261 atcttcctcg aagtcatctt cgtaagccgt tggtgtgaag ctacgtagag attgccttgg
     4321 acttccatgc cgttctctca gctctttttt atataataga taatccaact cacgactttc
     4381 tttgtcattt aagtagtgga tatttttttg caaataatct aacctcaatt gttcatgatg
     4441 ggttaggata ttattgtttt tattcatctg tcttcatcct agctggtcat atagaccagg
     4501 taattcccta gtactttata ggttatatct aaactagtca attctttttg agaataggct
     4561 aataattcct cagactgatt gtcaagatcc agtatgaaaa aatactcacc caaagccgtt
     4621 ttcaggggcc ggctttctat ttttgttaag ctgattcctc tccatgagaa aacagacatg
     4681 gccttataca aggctcctgg caggttatct ggcaatgtca gtgcaagact gactttttta
     4741 gctacttgtt ccagggcaat agacggagcc ttatccccca aaatccaaaa acgtgtaaaa
     4801 ttctcgctga tttcctggat gtcttgcgca attacctcca gtccatattc aactgctgcc
     4861 gcttgcggag caattgccgc gaatggttgt tcagggtgtt ctgccacaaa gcgagcagca
     4921 taggctgtac tagctgttat ttcaatacga gcctgaggaa aatgttcctg aatatatttc
     4981 ttcccctgag caattgcctg cggatgagaa tggataacct ctacagcctt atcggcactc
     5041 gtggctaaca gttgttgggc aatcggttga acaatctcgg caaccgcatg aatctccgcc
     5101 tgatgaaaga gatagtcaat cgtttcatga acactacctt caatcgagtt ctctactgga
     5161 ataacggaat aggtaacttc tcccgtttcg taggccttga taacctctgt aatcgtctca
     5221 aaagcctgca aatccgcact cggaaaggcc tgctgggcca cttgatgtgt aaaagaacca
     5281 cgaggtccta gataggctac ttgcataaaa ttttccttgc tacttgttct ggattcagtt
     5341 tatctgtatc gattacagta tcagctaaac cttgataaag tgccattcgt tcacgataga
     5401 gggcttcaaa ctcttcctta ctacactgta aaaagagagg tctttgcgat tgtctatcct
     5461 tacgaattct ctgataggaa acttcaaagg aggcagtaag aagtacattg tcctccctat
     5521 ttgccaacag caattccctg tttacttcag atttaatcac cccaccacca gttgacacga
     5581 tacaattact aggtaagtcc agcaattctt tcagtacctc tgtctccagt tgtctaaacg
     5641 aagcctctcc ttcaagactg aaatagtcag caataggcat accaatccgt tcttcaatga
     5701 tatggtccat atcgtaaacg gggagattta acaaatgtgc tgttgttgtt tttccaactc
     5761 ccataaatcc aagtaaaacg attggcatac gttctcctaa tccatcaaac tatttaagtg
     5821 ttcaaagaag gcaggatagc tagtgttgat agcttctgct ctttccaata caacttctcc
     5881 atctttggcc aacaaggcgg caatggcagt catcataccg atacggtggt caccaaatgt
     5941 attgatttca gcaccatgta aagcagttgg tccgtgaata atcataccat cttctgttgg
     6001 ttcaatagtt gctcccatac tatttagagc atctgcaaca acctgaatac gatccgtttc
     6061 tttaactttc aactcctcag catcacgaat aatcgttgtt ccatgtgctt gagtcgctag
     6121 taaggtaata attggcaact catcaatcaa acgaggtatc aattcgcctg caatctccgt
     6181 agccttcaat tccgacgttt caactgtaat ggttgctgat tttgcaagtt catctatgtt
     6241 agaaagggtc atttttccgc ccatagcttt aatgacatct agaataccag tccgagtttc
     6301 attgattcct acattttcaa ggacaatttt tgaacctggt acgattaagc cagcaaccaa
     6361 ccaaaaagca gcacttgaaa tatctcctgg aactgtaatc tcttgggcaa taaactcctg
     6421 accaccttgg atgcggattt ccttgccatt gacttctaac tgtccaccaa actggacaat
     6481 catatcttct gtatggtttc gagtcaattc tttttctacg atgaccgact ctccctcagc
     6541 ctgcaaggca gcaaaaatca gagctgattt tacttgggca gaggctacag ggagttggta
     6601 gcgaattggt tttaaattct tattcccttt gatggtcaac ggaggtaggt cacgttcagt
     6661 ttgtccagaa atctctactc ccatttgact gagtggaata gtcactcggt ccatgggacg
     6721 tttggacaag gaatcatcac caaacatagt cgcctcaaag tcttgacctg ccaaaacgcc
     6781 tgaaatcaaa cgaatcgagg ttccagaatt tcccatatcc aaatcatttt ttggcgcttg
     6841 aagaccatca aaaccaacac cgtgtacttc aacaatatca ccattgtctt caatttttac
     6901 acccaaatca cgaaagacct gcatggttga caagacatct tccccacgta aaatatcgtg
     6961 gacacgggta acaccttttg caagggaacc aaaaataata gagcgatgac taattgattt
     7021 atctcctggg acacgaatcg ttccctttag tttttctacg cttcttctta agttcatatc
     7081 cttacctcaa actagtatca tttctatttt atcatattta taaaatattt tctgattttt
     7141 atgacaatta cttgtgaaaa atcaatctcc attacatttt tgaaacaaaa aactaaaaat
     7201 atttactata aaaattttaa taaaatctat aaaacaaatg tagattatgg tatactactg
     7261 ataataaatt gttatcggta ggagatgttt tatgtattac ggtcgcgata ctgaaataga
     7321 agaattaaaa cagcatttta aattttccag taatgataaa aatagtttat atattattaa
     7381 tggcttaagt ggtagtggta aaaccgagtt aatcaaagag gtttgtcaac aagtttacag
     7441 tcatgataaa gaagcgttta ttctctacat tgatgttaca aatgacgggt ttgaaagtaa
     7501 taaatttttt gaaaatctac taaaaggagc gtatgtccca actcaattca gaagaaatct
     7561 atgcttatca atacctcaaa aatattcatt ttcaaattat ttaagaaaac aaaaactaac
     7621 aaatctaact ctgaaacata gcatagtttt aggttaatca gatctttgat ttcattcgat
     7681 acaacctata aaaaagtaat tgattatcct tgggaagaag ttgttactga aataaaggag
     7741 ggaatatttg aaagtgattt atatttaaga tatttcagtc atgtttcaaa aaaaatccgt
     7801 ctgaatatta ttattgataa ttatcaattt ttatctgaag atataaaaat aaaatttgaa
     7861 gatgacttta atacacttca aagcggagtc tccttaacta ttataaaccg aacaactgat
     7921 aagttaaaat caattgataa actagataca ttggacaatt atactcctac tgtattaaat
     7981 ttatcgtatc ttactgagga tgagtgtaaa ttactaataa gaaataaaat tgctttactt
     8041 gataatatca aattgaatca aatctggcag ataacacaag gtaactataa agagattgaa
     8101 ttgattatta acagacttat tgataatcca aattcagaat tatttaatat ttctgatata
     8161 tatgacaaac ttccagatat tcaaaaaaat atacttctca tatcatcaat ttttcctgct
     8221 ggtatgagaa aagatatagt ttttaattac attaaatcta tagtagatga aaatattgaa
     8281 gtagctgatt ctctaaaatc ccttattgat gcaggtttcg tatatattaa tggagataca
     8341 aatgataaaa tcaaaatttc acacgaatca attgtaaata gtattttaaa tcacacaaat
     8401 acttctgatc ttcaattagt aaccaacaat ctaaaaatat atttagagca aactatctta
     8461 tctataggag ttggtggcga gttagcttat ttaattcact gcttaataaa tatatgtaat
     8521 attaaagagt tacgacaaaa tgtagaatat atcaaacagt tacttgaaat agaatacagg
     8581 aaaaattcat atttttacat tgcatctttg agcaagaaga tacatcattt aatagaatta
     8641 ttaccataaa aatacttaca ttatatattg aactcgtacc agtggatttc tgatttcaat
     8701 ggaggcttag ctattttaaa tagccttcaa caagataatt attcaaaaga tttacaacta
     8761 tactatccta gatttcaaat tcaaaaatat gaatttgagg aggcactaaa atcactggaa
     8821 aagttagaaa atagctctgg aacattactc tacaagttaa atgcttatgg tcatttaggt
     8881 aaagatcaag atgcaattaa actccttaat gagaccatga attctgtaga aaaagacgac
     8941 ttctattata ttattttacg aaattctgct cattatttcc caaccaaaga agctaccaaa
     9001 aatctcgaat tagcattgga ctattttcaa cgtaatgaat atcaaatacc tgttgcaaca
     9061 gtatataata atctaggtgt tgttaatata tgggatgggc aatatgatat agctttagag
     9121 aatataaata aggccgaaaa aatactaaaa aaatatgatt caaatgaaat ttttgaacca
     9181 tattgtaata aatcaattat ttttctgatg aataaaaatt atcaacaatc tctggaattt
     9241 ataaataaat cacttcaaga atgtcctaaa gctttgacct tagatattag gatgctcaag
     9301 ttaaacaaat taattattga gttgatttct gaaaaaatct cttttacaga atttcaaaat
     9361 tcactaaaga gctttgaggc agaaattcca ctcatagacg atccttggta taaatttcaa
     9421 atagtataca atttacaaca atttgaagat attccttttg tttatgaaaa aacttatatt
     9481 gatgattatc aagacgggct caccaaatac tatctgttga ttccatacaa aaaatataat
     9541 ttctgtatag gtctttctcc taattggaga tattaatttg ttcatggtac ttgtgaatga
     9601 gatctaaata tatggaataa tcatattgtt tatattttaa taaattagct actagtttag
     9661 ctaatttttt tatatcttca tcagtatagg ataaatttgt aattccaact gttcctaatc
     9721 tcattcctga agtcgtcatt ggtccgtgtg tatcatttgg aatttgattt cggttaacta
     9781 atattttatg ctgaaaaagt agattctctg cctccttacc actcaagttt agattcaata
     9841 gattaactaa aattatatga gtctttggtt ttttataaac aacatcaacc ccctctttac
     9901 ttaattgttt tataaacaat aaagtatttt ttataatctg tttagcataa tcttgaatat
     9961 ctattgataa taatttgatt aaacagatac atttcgcaaa taatgcagtt tgtgtaggcc
    10021 caccctgtgt tctaggaaaa attgaattag ttattttttc ttcaaatata gaacgataca
    10081 gtagtactcc tccttgaggc ccacgtaaac atttatccat tgtaaaagta gcgaaatcca
    10141 catatggaaa aatcgactta tgtagctttg ccataatata taaaacactg tggcaaatat
    10201 ccgctaagat gagggtattt gggctaacct cttttataat ttcataaatt tgttgataat
    10261 taaattcatt tccatacgac gaagcaccaa taataatcaa tttaggttta tatttatcta
    10321 ataattcctt taattcgata taatcaatat ttaagttatg gtctaagtga taatatttta
    10381 cagtaccttt acctgtataa gtatgcgaaa tatgtcctcc gtcttttgga gataacgata
    10441 aaatataatc gtctctttct aaaacacaat tgtagactat ttggttagct tgagttcctg
    10501 aatgtggttg cacattaact ctataatcac caggatttaa atcaaaaagt tgaagacaca
    10561 attcttctga atatacttca atattatcca atgaagtaca atgaggaaaa aagcgttttt
    10621 caacagctcc ctctgttggc agagtagcga gagggaaact ttgaatcttt aatacttcgg
    10681 tgaatggata gctaatacat gcagcaaggt ttatcaggct attctgttct tggttatatg
    10741 aatcaagaat tttatttaac ttctgataga tttcaccttc aaatttatta attttataca
    10801 ctgatttctc ctaccgataa caatttatta tcagtagtaa attgataaat tatcgtatat
    10861 aatagcttta ttacgatata ttaaggagat tatattatga attacgacac tatccagaga
    10921 tatcttgact tttgtgctat tcaaagacga cttagttctc atactatccg agcatacaaa
    10981 tctgatttac atcagtatta taactttggg accaatgata ttaggtccta tcttactttt
    11041 ctcaaccaac atataaaaaa gactagcaca ttaaaacgga agattgctag tcttaaatca
    11101 tactataaat ttctggaaga agaaaaacta atttcaaaaa atcccttcca tcagcttcga
    11161 ctccactaca aggaagagaa aaagcttcct aaaacgattt ccttgaaaga tttacaaaaa
    11221 atatattgtt tcgcccacca acaaatagaa aattctaaaa ataagcattc tatgcggaaa
    11281 gctatgcgaa acctactcct tatctcgcta cttttatcaa ctggtctacg catctctgaa
    11341 ttatgtaatt taaaacttga taatatcaat ttggaaaata gaaccattca aatactcgga
    11401 aaaggaaaga aagagcgact actctatatt ggaaacgatg aaacactttc gttacttgaa
    11461 gactatatag cgcatcattg tagtcattct agttatctat ttaccggtgt gaaaaacgat
    11521 gatcatctta aagaaccaag tgtgcgctta attctgaaaa atatttctca ctcgctacaa
    11581 ctgaaaaaac atatcactcc acatatgttt cgacatagtt ttgcaactat gttgcttgat
    11641 aatggcgtcg atattcgaca aatacaacat ttactgggcc acagtaacat caatgtaaca
    11701 caaatctata ctcatgtctc tcaaagcaag caggtagaaa ttctaagtga gcataatcct
    11761 cttaaccaaa tcacaccact acttcgtaca taagtaaccg caaaccaagt agacttgacc
    11821 taaatcactg agtcggatag tcataataca gcaccttatc caagattgtt tccattactt
    11881 cagggttgat agattggaag aatgtgactt ccgattttcc gatacgaatt ttcatcagaa
    11941 tatcgtttct gcttttcttt tcaaagcggt gagatttggg aatagtcaat gagacgacga
    12001 gctgtgacat aaaaaatcct ccagttttgt tttttataac agtatactgg aggagggagt
    12061 gattggatag ataccttgtt attgggcggt tacgattgac ctaagacact atgaatctgg
    12121 taacttcctc gctaaggaac acattgccaa gcgtggcaat ccctatgcta gaaaagtttt
    12181 gttcaagtgc ctttacaata tcgcttcagc tagccacact aatcctttac gattacgatt
    12241 caacccaaag tcagtaaagt tgtttactcc ctataattct aacaccttgt ttcaaaaaat
    12301 ggtattggca attattaaac aacagacctc aacgattgaa caacttacca acgagttgac
    12361 cctccttcgt gaacaggttg a
//
LOCUS       DASFQD010000073        11678 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.073, whole genome shotgun sequence.
ACCESSION   DASFQD010000073 DASFQD010000000
VERSION     DASFQD010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11678
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.073"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..596
                     /locus_tag="U1021_001507"
     CDS             <1..596
                     /locus_tag="U1021_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003059255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HEM4712034.1"
                     /translation="KVGVQLWFHANGVDESNVHEPYKPKSRGLGNSQVLPRDYRTQRE
                     IEIVLAEMADQVANRLRSAHKKATVISIHISYSRTEVKKSINAQKKIDPANLPKTMVG
                     HVLELFRKKYTSGAVRQIGVSYSGFVDENYTLLSLFDDVEQIEKDNRLQTAIDVVREQ
                     FGFLAIQKGTVLTEGSRNIERSKLIGGHSAGGLEGLK"
     gene            593..961
                     /locus_tag="U1021_001508"
     CDS             593..961
                     /locus_tag="U1021_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004254363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712035.1"
                     /translation="MIDRSYLPFQSAREYQDTKMQKWMGFFLSEHTSALSDDINKVTY
                     MSDLSMEKKLLLLSQVYAGQLNTRIHVVEKNNRISYTGTIPSLTKDFILIKTPTGHIN
                     LKLKDIVSIELVEEVLYESA"
     gene            948..1262
                     /locus_tag="U1021_001509"
     CDS             948..1262
                     /locus_tag="U1021_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712036.1"
                     /translation="MNQLEFQRNHLQMDYYSESYQDFERDFYRYSNMNIPLTFLTDDI
                     LKTMATSRKNYFVLNKEKARDNRDHFFLFEISTIDENPLIYRYSYKKTTTYLTQKQEQ
                     FN"
     gene            complement(1300..2070)
                     /locus_tag="U1021_001510"
     CDS             complement(1300..2070)
                     /locus_tag="U1021_001510"
                     /inference="COORDINATES: protein motif:HMM:NF013577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM4712037.1"
                     /translation="MIYGKLPVVFLGLLASEKNGSTNSIIASYILEHLEDMKDIGIQQ
                     FAEDCNVSTSSISRFCRDVGLESFSELKMILNQVNLQKGPEASQGCFQDRKKSYTELT
                     QSGIQQVSDSLNEFEVYELVQDIIKYEKVATFGLMKAETAALILQSDLLMYGKQIFSN
                     LSFKEQTDYILNADEQHLIILFSFTSSYFDYAPLKPFLQKKKHPKIWMVTGGNTNAPS
                     FVHKCLRFKSTQNHFEHPSQLDFVATIIAQEYNFLNKK"
     gene            complement(2083..2640)
                     /locus_tag="U1021_001511"
     CDS             complement(2083..2640)
                     /locus_tag="U1021_001511"
                     /inference="COORDINATES: protein motif:HMM:TIGR01383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEM4712038.1"
                     /translation="MVKVAVLMAEGYEEGETLTIVDILRRAEIETTTFHFGDDEFVKG
                     MHNMYIKADKKFGSEVYEYDVVVLPGGRPGGANLLANPDVIKLVQDFNTTEGKYIGAM
                     CSGTVVLSEAKVIDGKDVTGYTGYAEKLIGGNFKEDVVVFDQNIITSQGPATPYPFAY
                     KIAEVLGKDTAVLRERMLYNFAGGR"
     gene            complement(2633..3205)
                     /locus_tag="U1021_001512"
     CDS             complement(2633..3205)
                     /locus_tag="U1021_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001140921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEM4712039.1"
                     /translation="MVKVAVLVAPGFEEGETLTIVDIIRRANIECELVGIDEIVTGAH
                     DITVKCDAVLDANLSGEYDMVVLPGGRPGADNLRDNKLVIKAINEMDAEGKWVAAMCA
                     APIALEQAGILENRNYTAYVGYQDFIKVGNFKEDIVVVDKNLVTSRGPATAYEFAYAL
                     VDVLGGDSIAVKKRMVYTNAFDVEEGKVYG"
     gene            complement(3283..4696)
                     /gene="ascB"
                     /locus_tag="U1021_001513"
                     /pseudo
     CDS             complement(3283..4696)
                     /gene="ascB"
                     /locus_tag="U1021_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937725.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
     gene            complement(4717..6537)
                     /locus_tag="U1021_001514"
     CDS             complement(4717..6537)
                     /locus_tag="U1021_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019780896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HEM4712040.1"
                     /translation="MSSNKETAKQIIQIIGEDNITFMTHCATRLRMNVADENKVDLNA
                     LDQVSGVIKAQIKSGQLQVIIGAKVAQVFEEASKLVSLSDNQVQSTEIKKNIIARVVE
                     AISGCFGPVIPVLIGCGMVKSVAAILTTLNLVDPTSGTYQIISLIGDLLFYFFPFFLA
                     VSAAKKFKTHEFLAVALAGALMYPTIQNGALQAAETGVNSLSFLGLPVLFVNYKSTII
                     PIILSVWIMSYVYKWVNKLIPDTFKVLFVPMIVLFIMVPLELIVIGPFGTYLGQGVAK
                     VVSYLYTTNGVLGALLFGTFRPLLIIFGMHYAITPINAQLIAEYGYSVISPANLTGNL
                     AQAGATLATFFFLKKKSEKAEALSAGVTALFGVTEPAMFGFNLKYKKPMICAMIAGGI
                     GAAYINFWSGGATAVILPGLLALPTYIADNYIHIIIGISISIALAMIGTLVFGIGSKP
                     KADDTTIVSATKLDVKPFAKGEVVELNKVNDAVFSTGVMGNGFAIVPTEGKVFAPFAG
                     KVTMVFETKHAIGLRSDNGVEVLVHIGLDTVNLKGEHFNVRIKEGDTIEAGQLLVEFD
                     LEKLKELGYDTIIPFIVTNGAEFAQVTPKLSSDSIEFALA"
     gene            complement(7341..7880)
                     /locus_tag="U1021_001515"
                     /pseudo
     CDS             complement(7341..7880)
                     /locus_tag="U1021_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001842569.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CpXC domain-containing protein"
     gene            complement(7944..8585)
                     /locus_tag="U1021_001516"
     CDS             complement(7944..8585)
                     /locus_tag="U1021_001516"
                     /inference="COORDINATES: protein motif:HMM:NF012651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEM4712041.1"
                     /translation="MNFEEMKSTLENMLKENYADFTKAIISIEKDISDPDLLEQVYQA
                     YMDDDSISGLLHSNIDAIIGAIESNKSQLSTDNVELIGNVTKNVEVKVIPRGDGKDFK
                     VANFSIARNDDQGNTHFTNVTAYNGRADFAEQLKKGDFVQLTGQMKYDEYEGKLFSNL
                     VVKNIKILKTRKKFLEEKVSKEEKPSTLGALKEYSQQTKSEQTKPKLDKGMEL"
     gene            complement(8582..11678)
                     /locus_tag="U1021_001517"
                     /pseudo
     CDS             complement(8582..11678)
                     /locus_tag="U1021_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636992.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
BASE COUNT         3636 a         2449 c         1780 g         3813 t
ORIGIN      
        1 gtaaagtcgg tgttcaactt tggtttcacg ccaatggagt tgatgagagt aacgtccatg
       61 aaccctataa accaaaatca cgaggattgg gtaactcaca agtacttcct agagattaca
      121 gaacccaaag ggaaattgaa atcgtattag ctgaaatggc tgaccaggtt gctaatcgac
      181 tgcgttcagc ccataagaaa gcaactgtta tttcaatcca tattagctat tctaggactg
      241 aggtgaaaaa atctataaat gcacagaaaa aaatcgaccc cgcaaatctc ccaaaaacaa
      301 tggtgggcca tgtacttgaa ttattccgaa agaaatacac ctctggtgca gtgagacaaa
      361 ttggtgtatc ttatagtggc ttcgtagatg aaaactatac tctactatca ctctttgatg
      421 atgtagaaca aattgaaaaa gataatagac ttcagacagc tattgatgtt gtcagagaac
      481 agtttggctt tttagccata caaaaaggaa ccgtcctaac tgaaggttcc agaaatattg
      541 aacgcagtaa acttatcggc ggtcattccg ctggtggatt ggagggatta aaatgattga
      601 ccgttcatac ttaccatttc agtcagcaag agagtaccag gatacaaaga tgcaaaaatg
      661 gatgggcttt ttcctatctg agcatacatc agcactctct gatgatataa acaaagtaac
      721 gtacatgtca gatttgtcaa tggagaagaa attattactc ctcagtcagg tgtatgctgg
      781 gcaactgaac acgcgcattc atgtcgttga aaaaaacaat cgaatttcct atactggtac
      841 aataccaagt ctgaccaaag atttcatatt aataaaaact ccaacaggtc acattaattt
      901 gaaattgaaa gacattgtta gtattgaact tgtagaggag gtgctctatg aatcagcttg
      961 aatttcagcg taatcacctg caaatggact attacagcga gagctaccaa gattttgaac
     1021 gtgacttcta ccgctactcc aatatgaata ttccattgac ctttctgact gatgatatcc
     1081 tcaaaacaat ggcaacttct cgtaagaatt actttgtcct aaataaggaa aaggctagag
     1141 ataatcgcga tcacttcttc ctatttgaga taagtaccat agatgagaat ccgctaatct
     1201 accgctattc ttacaagaaa acaactacct acttaacaca aaaacaggag cagttcaatt
     1261 gactgctcct gtttgtaatt accaacattt tgctaaaact cattttttat ttaaaaaatt
     1321 atactcttga gcaataatcg tcgcaacaaa atctaattgg ctcggatgtt cgaaatgatt
     1381 ctgtgtcgat ttaaatctta aacatttatg aacaaatgaa ggagcattag tgtttccacc
     1441 agttaccatc caaatcttcg ggtgtttctt tttttgtaaa aaaggtttta aaggagcata
     1501 atcaaaataa gaacttgtaa aagaaaacaa aataattaga tgttgctcat cagcatttag
     1561 tatgtaatca gtttgctctt taaaagacaa atttgaaaaa atctgttttc catacatcag
     1621 taagtcactt tgtaaaatga gtgcagcagt ttcagccttc atcaatccaa atgttgctac
     1681 tttttcatac ttaataatgt cttggactaa ctcataaact tcaaattcat ttagagaatc
     1741 tgaaacttgc tgtattccag attgagtcaa ttctgtatat gattttttcc gatcttgaaa
     1801 acaaccttga ctagcttcgg gtcctttttg taaattgact tgattcaaaa tcatttttaa
     1861 ttctgaaaag ctctcaaggc ctacatctcg acaaaatctt gagatagacg aggtagaaac
     1921 attacaatct tctgcaaatt gctgaatacc aatatccttc atatcttcaa gatgttccag
     1981 tatataactt gcaattatac tattcgtaga accattcttt tcacttgcta aaagccccaa
     2041 gaagacaact ggtaattttc cataaatcat atctgctctt ttctaacgac caccagcaaa
     2101 attatacaac attcgttctc ttaatacagc cgtatcttta ccgagtactt cagcgatttt
     2161 atatgcgaat ggatatggag tagctggtcc ttggcttgta ataatatttt ggtcaaaaac
     2221 tacaacatct tccttgaagt ttccaccaat tagtttctct gcataaccag tataacctgt
     2281 gacatcctta ccgtcaataa cttttgcttc agaaagaaca actgttcctg aacacattgc
     2341 tccaatatat tttccttcag tggtattgaa atcttgaacc aattttatta catcaggatt
     2401 tgctaataga tttgcaccac ctggccgtcc ccctggtaga acaactacat catattcata
     2461 cacttcagaa ccaaattttt tgtccgcttt gatatacata ttgtgcatac ctttgacaaa
     2521 ttcatcatct ccaaaatgga atgtagttgt ttcaatctcc gcacgtctta ggatatcaac
     2581 gatagttaat gtttccccct cttcatagcc ttctgccatc aatactgcta ccttaaccat
     2641 agactttacc ctcctcaaca tcaaatgcat ttgtataaac cattcgtttt ttcactgcaa
     2701 tagaatcacc acctagaaca tcaactagcg cataggcaaa ctcataggca gtagctggtc
     2761 cacgactggt aactaaattt ttatcaacaa ccacaatatc ttctttgaaa ttaccgactt
     2821 tgataaaatc ttggtaacct acatatgcag tataatttcg gttttcaagg ataccagctt
     2881 gttctaaagc aattggtgct gcacacatag ctgcaaccca ttttccttct gcatccatct
     2941 cattaattgc tttaattacc aacttattat ctcttagatt gtctgcacct ggacgacctc
     3001 caggtaatac aaccatatcg tattcacctg aaagattagc atctaaaaca gcatcacatt
     3061 tgactgtaat gtcatgagct ccagttacaa tttcatcaat accaaccaat tcacactcaa
     3121 tattagcccg acgaataata tctacaattg tcagtgtttc cccctcttcg aatccgggtg
     3181 ctacaagtac tgctactttt accatatctt acctactttc atttttcttt attttatcac
     3241 ttactcacat cggataaaac attttttcat aatctggaaa aattaattta acccattgga
     3301 ggcaattatt ttcttgtacc attcaaatga tgactttttt atacggtcaa agctaccatg
     3361 acctgaatta tccgcatcta cataaatcat gccatagcgt tttgacattt cacctgtgga
     3421 agccgctacc aaatcaataa ttccccaaac taagtaacca ataatttcaa caccgtcctc
     3481 aatagcttca cttaccatct gaatatgctt acttaaataa tcaattctat aatcatcata
     3541 aatttggcct tcaactactt gatctttagc accaagacca ttttcgacaa taaacagagg
     3601 tttttgataa cgatcataaa gtgtatttaa agtgatacgt aatccaagtg gatcaatttg
     3661 ccaacccaat cactacttga aatgtaagga tttttaactg aagtcatcaa atttgatgat
     3721 gtttcatcct gtttttcatg ggagatacat ctagaggtat aataacttaa tgccacaaag
     3781 tctgctgtat tctctgataa aatttccaaa tcatcatctt ctatccttag tttcacatcc
     3841 aactctttga attttcgcct agaataggta gggtactgtc cacgacattg aatgtcaata
     3901 aagaaatagc tttctctatt tttgtctaat gccatcaaaa tatcctccgg atggcatgaa
     3961 tacggataat agtcaccagc tgccaacata catcctactc tattattcgg atttatctca
     4021 tgtgcaattt ttacagccaa gctacttgct attagttgat gatgggctga ttgataacga
     4081 atttgagcaa cattttcttc accaaataat tctaatccac cacctgagaa agagttgtgt
     4141 aagattacgt ttatttcgtt aaaagtaatc caatttcgaa ccaaatcttt ataattctca
     4201 aatagagttt tagcatactt agtataaaga gtaatcatct ctcggtttct ccacccacca
     4261 atggagtcaa ttaagtatac aggtatatca aagtggctaa tcgtaaaact agaggttcaa
     4321 tattatatga gcgacacaac tcaaaaactc tgcgataaaa atctaagcct gcctgattcg
     4381 gttcattttc gactccagtt gaaaaaattc gtgtccaaga aatgctggtt ctaaaacact
     4441 tgatacccat ctcagcaagt aattttatat cctcttcata cctgtcgtaa aattgaattc
     4501 ctattcgact tgggtagtaa gtattttgtt cgtcaaaagt ccgataatca ataaagccct
     4561 gttttacagt tcgacgtttt tcaccaagag gtactacatc cataacagat agagagcgat
     4621 tatctttaag ataagcgccc tccgcctgat ttgctgcaat agcacctccc cacaagaaat
     4681 cttttgggaa tgtcatattg tatccttttc taaaaattag gctagtgcaa attcaattga
     4741 atctgaagaa agttttggag tcacctgagc aaactcagca ccattggtca caataaatgg
     4801 aataattgta tcataaccta gttctttcaa tttttccaag tcaaattcta ctagtaattg
     4861 acctgcctct attgtatctc cttctttaat ccgaacatta aaatgctcac ctttaagatt
     4921 gacagtatcc agtccaatat gaacaagtac ttctacacca ttatcgcttc gtaatccaat
     4981 agcgtgctta gtttcgaaaa ccattgtaac cttacctgca aatggtgcaa aaacttttcc
     5041 ttcagttgga acaatggcaa atccatttcc cataactcca gttgagaaga ctgcatcgtt
     5101 aactttatta agttctacta cttcaccctt cgcaaaaggc ttcacatcta attttgtagc
     5161 tgatacaatc gtagtatcgt cagctttagg tttactacca ataccaaata ctaaagtacc
     5221 aatcattgct aatgcaatac tgatagagat gcctatgata atatggatat aattgtcggc
     5281 aatgtaggtt ggtaatgcaa gtaggccagg aagaataaca gctgtcgccc caccactcca
     5341 gaagttgata tatgcagcac caataccacc agcaatcatt gcacaaatca ttggtttttt
     5401 gtatttcaag ttgaaaccaa acattgcagg ctcagtaact ccaaataatg ctgtaacacc
     5461 cgctgaaagt gcctctgctt tttctgactt tttctttaaa aagaaaaatg tagcaagtgt
     5521 cgcaccagcc tgggccaaat tcccagtcag gttagctgga gaaatgactg agtacccata
     5581 ctccgcaatc aattgagcgt taatcggagt aattgcataa tgcattccaa agataattaa
     5641 caaaggacgg aaagtaccaa ataacaaggc accaagtaca ccatttgtag tatagaggta
     5701 gctaacaact ttagcaacac cctgaccaag atatgttccg aaaggaccaa ttacaatgag
     5761 ctcaagtgga accatgataa ataaaactat cataggcaca aataaaactt taaaagtatc
     5821 tggaataagc ttattaaccc acttataaac atatgacatt atccatacac ttaaaatgat
     5881 cgggatgatt gtagatttat agttcacaaa tagaaccggt aggcctaaaa aagatagact
     5941 attcacacct gtttcagctg cttgtagagc accattttgg atagtaggat acattagtgc
     6001 acctgctagt gctacagcta gaaactcatg tgttttgaat ttttttgcag cactaactgc
     6061 taaaaagaat gggaaaaagt agaacagtag gtctcctatc aaactaataa tttgataagt
     6121 accacttgtt ggatcaacta agttaagtgt tgttaagatt gccgctactg acttaaccat
     6181 accacagcca atcaaaactg gaataacagg accaaaacaa ccagaaattg cttccacaac
     6241 acgggcgata atattctttt taatttctgt actttgaact tgattgtctg ataatgacac
     6301 cagcttcgaa gcttcttcga atacctgagc tacttttgct cctataataa cttgtagttg
     6361 tccgctcttt atctgcgcct ttattacacc agatacctga tcaagagcat tcaaatctac
     6421 tttattctcg tcagcaacat tcattcgtaa tcgagttgca cagtgggtca taaacgttat
     6481 attatcttcg ccaattattt gaataatttg cttcgctgtt tctttattgc tgctcattta
     6541 gagcacctcc tatataaatt tccctaggtt tgagtacatg ataacgtaat atgactgcgc
     6601 tttcaagtga ttttcaaaaa ttggaaattt ttgttaaaaa tgaaaaatac taatttacaa
     6661 aaaacaacag tttgtctaaa aattgtaaag tattagtatt tatttggata aaaaaggtgg
     6721 atacgtctct attcccgcaa actccttgta aatggaaaca aacacgtacc cacagggtaa
     6781 atgaaaatag aaactgataa tttctagcta tcacttctac ccactccaaa aatttactct
     6841 ctctaatact tccccacctc aatacaaaaa gccttgcaat taaggctttt cattatccct
     6901 ttcgttccaa ggtttctagg attttacgag cagagcaaca cactcagcgt ttactctcac
     6961 tctgttactt ccccatccca aaaagcctaa aaacaaatgt ttctttcagt ataagtttgt
     7021 ttttgaagct caaaactacc tgactgagat tcatcaaaag tacttactcg acaataggca
     7081 gcaacacgca acttcttatt tttaacatca gtgaactctc gctttgaagg aataatttca
     7141 acagttctct cagatacaaa tgcatctcaa attttctact gttgacgagt tattttagaa
     7201 ttctgtcttt ccattggttt tacctccttt ctagaaatct acataataat tatatatatt
     7261 aactacgttt ttctaaatta gaagataaaa tgacctaact aatgattagg ccatttatac
     7321 ttgaaaatag attttgattt ttatgtcaaa ctggtacgag agaataattc cgcccatcta
     7381 gagtctatgt aatatgtatt aatttctagg tcctcaacat cagcaaggta gtactcatat
     7441 tgttcttgag aaaagtcgag agatgctact gcagtctggt tattaataaa cataaattga
     7501 taactttcat gtccaacctt ggtgaaaacc atatgttcat agttaaactg aatatcacca
     7561 tcctcaagag gactattcat atacttcata agctcaattg ctctatcatc ataccctgct
     7621 gaaacaatct gtaccttctc aacgaaagac tctaaatccg aaactactcg aattctatac
     7681 tcactgagat tgacaccctc agaaatcaaa gagcatattt gcattgaaag cacttcaaca
     7741 ttaccatctg cacaatactg aataattgtt ttttgttctt catctaatac gactgttggg
     7801 taatcaatta gcaccttgtg gttacagtta tggcaagtaa acttaaagaa atcccagtct
     7861 aaaatagcag aaacaatctc ataacacttt actccagacc gaaaaaataa gctagacctc
     7921 caaaatcgga agtctagctt atttcataac tccattcctt tatccagttt aggtttagtt
     7981 tgttctgatt ttgtttgttg ggaatactct ttcaatgctc ctaaagttga aggtttctct
     8041 tctttcgaaa ccttctcctc caggaatttc tttctcgttt ttaagatttt tatattctta
     8101 acaacaaggt tactgaagag tttgccttca tactcatcat acttcatctg acctgttaac
     8161 tggacaaaat cccctttctt taattgctct gcaaagtcag cccgtccgtt ataggctgtg
     8221 acattggtaa agtgtgtatt tccttggtca tcatttcgag caattgaaaa attagcaact
     8281 ttaaaatcct ttccatctcc tcttggaata actttaacct ctacattttt tgttacattt
     8341 ccaatcaatt caacattatc agtagacaac tgacttttat tggactctat agcaccaata
     8401 atcgcatcta tattggaatg caacaaacct gaaattgaat catcatccat ataggcctgg
     8461 tagacttgtt ccaacaggtc tgggtctgaa atatcctttt caattgaaat aatggccttg
     8521 gtaaagtcgg catagttttc tttcaacata ttttctaaag ttgatttcat ttcttcaaaa
     8581 ttcatattac ttgctcctct tctatttctt ctttcttctg acttttgtag tcacgttctt
     8641 caacttcagc tttaaaagct tgaatttgtg ctaatgtgga aggtcgtttt tcctctccat
     8701 cgacatcata agttgattca aaggcatcac tatccttaat atcatggtca taacggtctg
     8761 caattccatc gttatccatg tcatgatcaa gcgactctct cgtataaggt aaaccgagca
     8821 tttgacaggt tgttttctca tcaattgata gtaaatcgtc tttggttgaa tgttctaaaa
     8881 ataatttaaa atgctgggct tgctcctctg gtgtacttcc atcaaactga cctgtacgaa
     8941 tatctgaatc tgcgaaggtt aatttccaag aaaaattgga caagtctaca ctatactcaa
     9001 tatcatatcc accaacgtta cttttgctct tggctaagta gactaaatct ccagttgaga
     9061 atatatcatt gaattgttct acgttactat gacttgattc ttcgcagaag ccatactcac
     9121 gatccaaaaa gtcaacaatc gctgctttaa catcttcaag taagggattc ggattatcca
     9181 gttcttctac ttcgcccatg tccaagattc gattgacctc tgctaaacgc aaggtctttt
     9241 cttttaacat atctgccttt tcaaatggtt ttgtcacctc ttcttttgct acctggagct
     9301 tgtattggac atctgacagt ctattttcta gcttggatag ttcttcatca attcgatcca
     9361 aaacgttgtc taaacgctga atattgcctt ctgggctttc accaaaatga ccattgtaag
     9421 aaagatttcc ctcaatcaca aaatccattg cttgagcaat ctgattgaag aatgctgaaa
     9481 cttcaaatcc acgatagttg ccaataggca tactgccctc agctggaacc aatggtaaaa
     9541 ttttcatcaa ttcttctact gcttcttttt tgtcagaata tgtcttacct aatatctcca
     9601 ttccgttaaa taggccatca ccttgtactt taggctcacg tcttttaata tcttcattta
     9661 ctttttcaat ttgccctttt aatcgagtaa tctctgatgg ataatgtttt gcaattttat
     9721 cttccaactg ataaaggtta gatttataat tggattccaa cattcgtaac ttcgatactt
     9781 caacatctaa atccatcttt tctttaataa gtggattacc agtcgcaagt gctttaattt
     9841 ctgcatagtt caaagtattc tcatcaacat catcagccac tcgcacaggt gtttttgagg
     9901 tcataatttg ggagataaac ttttgcttat tttcaatggt ctgccaaagg tacgcatcaa
     9961 aggtattctc tgtcacataa cggtagatat agacgtcctt gttttcattc ccttgacgca
    10021 cgatacgacc agaccgttgc tccaaatcag ctggcctcca aggaatatct aaatcatgta
    10081 aggctattag tttactttga acgtttgttc ctgctcccat tttcgacgta gaaccaaata
    10141 aaatgcgaac atctccactt ctgaccttgg caaagagttc cgcattttgc ttttcattat
    10201 tcgcatcatg tataaatgct atttcatttt ctgggatacc tagttcaatt aacttgcctt
    10261 tcatatcatc ataaagattg aatgttccat cccctttagg tgtagacata tcacaaaaaa
    10321 ctagctgtgc tgaccgttgt tcgctcgatt tttcccaaat agcaaaaata ttttttgtgc
    10381 agacattgac cttactttcc ggatcatcag gtagtaaggt attgattaac cgttgatcca
    10441 aggcaatctt ttttccatca tttgttattc gtaacatatt atcttcatga gactcaactt
    10501 ttctattacg taccttatca gctcgttcag ataaagtctt taaaatttct ttctgatggt
    10561 tcgttggtct ggttaaaatt gtttcgtaat gggcttgggg tgttggtaaa ttcaaaaggt
    10621 ctgcagtttt aatatcagcc atttctttaa caaaggacat gagttcaggc aaattataaa
    10681 attttgagaa tcgtgtctta ctacgatagg agtcaccctc tggagatagt tcgatggcag
    10741 taactgtttc accgaatgta gaagcccagg aatcaaagtg gtgtaaacct tttttctcca
    10801 ggtcatcata ttggagataa cgttgcattg tgtagagttc actcatcgaa tttgacactg
    10861 gtgtacctgt cgcaaaaaca acaccctttc cacttgtcaa ctcgtccaaa taacgacacc
    10921 ctttccacct gtcaactcgt ccaaataacg acacttcata aacatatctg aagatttcat
    10981 agcttcagtt tggccaattc ctgccacgtt tcgcattttg gtataaagat aaagattttt
    11041 gtagttatga gcttcatcaa tatatagttt gtcaactccc aattcttcaa aggtgacaac
    11101 atcatcctta cggaaatcat catttaattt ttttagtttg gcttctaatt tcttcttagt
    11161 tccctcaagt tgcttgacag taaagttttg gtctctttgg tacttatatt cttcaataaa
    11221 ctcaactata tcttgaattt gacgttttaa gtgctgctcc tgatattcct tactcattgg
    11281 aatcttctca aattgactat gtccaataat aactgcatca tattcaccag tctctatcct
    11341 accaacaaaa cgttttcgat tggcaggttc aaaatctttt ttcgtggcca ccatgatatt
    11401 ggcagctgga tacaactcca taaactcccg tcccatttgt tccgtcaagt ggttgggaac
    11461 aacaaacaaa gctttattgc tcatgcccag acgcttactt tccatagcac tggcaaccat
    11521 ctcgaacgtt ttccctgctc cgacaacatg agctagaagt gtattacctc cgtatagtgt
    11581 cctcgcaata gcattttttt gatgaggacg taaacttata tctgctgtca ttccttcaag
    11641 ggataaatat tgcccatcat actcacgatt tcgtatag
//
LOCUS       DASFQD010000074        11542 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.075, whole genome shotgun sequence.
ACCESSION   DASFQD010000074 DASFQD010000000
VERSION     DASFQD010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11542
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.075"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..4362)
                     /locus_tag="U1021_001518"
     CDS             complement(<1..4362)
                     /locus_tag="U1021_001518"
                     /inference="COORDINATES: protein
                     motif:HMM:NF019216.1,HMM:NF037372.1,HMM:TIGR01168.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HEM4712042.1"
                     /translation="MERKQRFSIKKLSIGVVSICIGFAFLTQGNSTVAAAENSVEVII
                     SNATGEEETIPTQPTETPNNRESIQNTETTTQEEVTVNNTVEGQTDTEKSTRTEQAVP
                     ESTTSQNDHLANTEDTTTTSSSTESSVNEVEFPTETTALSSPESSPKIETIDASLKAE
                     QPNTSEGTTALRAATNTSPTTTVTGNDTAIQAIENGSITPSKTIASLNAEEKQTLNNL
                     ILTNFETSADKVALLDVVKPKESLSISDLTKYFVPLIKQLKSDPNYKHLTDQERSAEA
                     TKLALIEANKNLYEDASIEALAPEAKNTFQQLLAFNNGQLLTEKSGLTVETLKNNLSQ
                     LYRGVLYLQQQYSFEKDLPQTLVFTPHTIGNIQADQTSAYDRLMAYGGHITDKRSLAL
                     NLNQIQFNNRMIGQYTGTKSTAELVEKIAQSKGKDVNSYFTEQSQALIGTSPNISIFE
                     LLKTNKPEYILPVLSQGRGVYLAGTSNSLTLGLLDSYTDLYPELKNYSKERGVQQPTS
                     TFFEKILTYQENWLTFLNSAKKDSTTIPFTLAVDTMNVYNETTKAHTWSPNEGTSAHS
                     AVLNFFSPMNLWENYVRSGVGLGGVANGENMIKAYETRFMHSNLSGVALFTHEMTHTN
                     DEARLFGGTYRKEGRRAGQGPEVYARGLFEVIDNTQNGVPGEYKPVFNLNTALTIADS
                     PNRTQALTPQTSTEKLANYTKNLVDLVAYLEAVEARVALKSLAENELATYFNKVVQVP
                     RNTTSNTSTTTTSLPSTNDAFLPYGQLTVASLTKPTSINDLVDQDAVSGQFIPRGISP
                     ILTELSHNQYDHVPLLESFYGASEAPSGNNTVGDISFKRHAYEILAWKGWDAFISYIS
                     NRYNSDSEAFKAILGNEYSDWASFKKAQYKRLEDKEPVNQLWQTSQLEKELETAIKAD
                     LAVLTTYRNSINSLLNSRSTVTQTQLDQAAQKASVARLATNVRKVKLDILNKALQFNN
                     LEASIFEAPKQSDIIYVKNGGNGQGLTEDTPMGSLAEALQKATDGTIIKLVGNATERT
                     PLVINKAVTIESDSSENAIIFNESIQISNNVTLRNLSIHALTESNVPGNIYIDGQVTM
                     DHVSTLISNRQTDKRPSLIIGSSADTTDKRESSLKILNTNETVFDKMTVQNAADIAIA
                     NGTQIKNGVEVTTPSPVTITSESNQVNKFQAPETNQVTLIFNNSKASNVELKNISNLI
                     VKNNSFISLNSQSLNPIQQALTVETGSQINLGDLEARFQSLKGDGILGFTDKGQLALQ
                     DLDGQATIQFKRKDMNFSESDGKTFVTIASKQSGLSVKLIPLDEILKMDKDGNYIYHQ
                     PYSAGYYFESVELDKILPSEVEDLLPEDKESPNQAIPQPEAITEIVVDGDGRWVFDRW
                     ELDSESTAKQHFYTGYWRYESSPQTTVRFEDVPFTTIYQADENRTAGEKETISSGKLG
                     KAKITETEGSEPVREVLE"
     gene            4519..5430
                     /locus_tag="U1021_001519"
     CDS             4519..5430
                     /locus_tag="U1021_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019783158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS982 family transposase"
                     /protein_id="HEM4712043.1"
                     /translation="MQSQHYYLANPNQTQVIFSKILTQVLALYERFVPHEVRNRRNIH
                     LQKQSDVVVIASYLWAIQEGRRTASAISRAIRHNLFPDNFPEHSRFCRICQNLAQSIQ
                     RMRYFMVLDLCQTCSFGLIDSFPCALCHPIRNMRATLLSEVADIGYNATKKIHYYGLK
                     FSVLVSDSGFPIDYVITPASIYDGDVALELLENSPFPIVYGDKGYVDRQTKAALVDCG
                     IQLISQLRKNMMGYSWLENYKISRLRKTVETVFSSLEQFGMEALRCRNIQALKFKTEA
                     ILLIYSLLLKSSHTEFGISLKYSLAYA"
     gene            5596..10968
                     /locus_tag="U1021_001520"
     CDS             5596..10968
                     /locus_tag="U1021_001520"
                     /inference="COORDINATES: protein
                     motif:HMM:NF019216.1,HMM:TIGR01168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HEM4712044.1"
                     /translation="MNLHFLQKKQHFGIRKFSIGVVSVALAISFSVAGGQVAAAQEAS
                     QTPVSSQQTSQAVTDQANQLQETNEVTVQIPETVGSSLNQATQENPAQESQLVEVEPA
                     IQKEVVSQDISAPQAALSAEAGQEQTAEEQSNTAGDESTLTVENSHQIIEQVEPKSIQ
                     TAQEPAGSTDEVTQPVQPTETATVEEVVQPVLRSARRARSVAAQELAKLPLDAQGQLM
                     PSVNGKTVHQYQVVYSDGSSQLVAAQTTDQTQANSDISNKVNQIKQELSTITYDSLYP
                     SLNNRERIYDKTEMDLIIAKENPGRTLTEEEKIVLRNKYYMDQLDMRDSFARVQGDLE
                     TILTGIFEKSKQVDIETIKTNKEKVLLGLTYLDRQFSFKFGNYQAKDFILYHPEVFGG
                     TGDVLTNLYTIGSQNYQDLLLAQSATTFKNKVARQLGQTDVFSFVEKGLLIFDKDKTA
                     SEWLKEESKALIVEAANSYGLTTSLYDKLKSDTRLNNHLLPLLSLPSSSIYALSTSNT
                     VTYGLTETYLDQAPANQEFEQKLSDYAHHQQEFLNFWYRMTEKKQEFTNYSPIIVVDT
                     VQKYGPSRNASELYSPKFGSNVLKGVREFIRPLNLYAKFAFAGGQANGTNSMNNFLYK
                     SLTDDGHAVYTHELTHMLDKTIWLNGFGRRTGQGAEVFARGLFESLNMSASSISDPIF
                     NLNTAYQLGDNRTQNASPERFQTSEDLKTYMQGILDVLYTLDYAEAQSILKKTPEERA
                     VLLNKISLIPNPANNGVGNTTETVNSIDTTLAASLTSVSDFVDQSLISGRYKFDGLNT
                     RGTARTNSYYTIPLFEPIYAALQNDTGSGGDISFKRNAYEILGEYGYENGMVAYLSDQ
                     HANDQAALNAIMPEYDGNLAAFKKAMFARRIDKVNQLNPTAVATDFSAIQSLMDQAVT
                     KDLAQLQTNQARNTFLSQNVNAVRELKNQIFQEYLAMTNDFQSSIYKEKEASRTFYVT
                     NGQESSTEGAGTEANPYHSLSYALQQASDGDVIKLVRNVTHRQDAPFVINKAVTIDGQ
                     GHTLTFRGPDLELGAAVTFTNMTLNMIPSGSHQPTIYLNGYQATFDAVSTTVNQLQDK
                     LRPTIVAGARTGEATGDHARLLVVNGDSNTRFRQIFAGNADSSSSIPVTITIDSEFAG
                     VDEGIDFGGQHDNVTYGRVELISRSTKVKEVVATNSMDNQVTIKAVRLYGAHLTDIQD
                     LHLAENADVTLSSQVDSIVGQVNIESRSKLQLDAGAVLQVGGLSGEGILSLLADNVLT
                     VTGDLTGTVQIEIRDFEQNLSKQVGKILVTIEGLTEQADAVRLVNAYGQYALVEENGH
                     YRLASQDQQPQTHTLTLRFIQAEQVLKSEQVQVVDGQSLANVEAYLPQAATGTYQLAP
                     TFDPSVLTGISASQTIDIPVVLVIPATPILSFDKTSIQEMTLVQGLDKSSYQEGEILD
                     LTGVRVRLVDQQGIALVIDATRFTEYGVSANPVGTPLLSSQQELTLTLGNHVLSLPIQ
                     VQAQLPSKASRFQPLVSGEVIVWPSDSNQTQKSQVLQAIRLPNEAGSVNLEVVGVLPT
                     ASGDYSVTIRVTYDDQSQEEVVVPLHILSIDKGSGVTHELPIGVLSKSDRYQPQVTGE
                     ARVLPASSSDDATAEIVKQISLPAEAGQFDVVVVTPIPQSSGDYSMIVRVVYDDRSQD
                     EIVVPLHIFKMENGKGVTHELPIGVLPPLETTKGDGVTHELPIGVLPSLEVALEKGLG
                     ENSPKPAAKEMAVSVSVVGQQKFAKGQLPKTGDRNNLLLVGVMLAIFNLIFWMPGKKP
                     HQVEEK"
     gene            11199..>11542
                     /locus_tag="U1021_001521"
     CDS             11199..>11542
                     /locus_tag="U1021_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEM4712045.1"
                     /translation="MLVIEQIEKLKKEKLELLTVLCGEDIGQYQIAKDLLLRKLDFEP
                     ADLSFAYFDMSEADYSQVDLDLVSLPFFSDEKVVILDYFSDLTTDKKRHLTDDELKQF
                     EVYLENPVETTR"
BASE COUNT         3248 a         2182 c         2522 g         3590 t
ORIGIN      
        1 ttcaaggact tctcttaccg gctcagaacc ttctgtctca gtaatttttg cctttccaag
       61 ttttccgcta gagatagttt ctttttcccc agccgttctg ttttcatcgg cttgatagat
      121 agttgtaaat ggaacatctt caaaacgaac ggttgtttga ggtgaagatt cgtagcgcca
      181 gtaacctgta tagaaatgct gtttagcagt actttcagaa tcaagttccc atctgtcaaa
      241 gacccatctt ccatccccat ctacaactat ttcagtaatc gcttctggtt gtggaatcgc
      301 ttgattagga ctttccttat cttctggcaa taaatcttcg acttcacttg gcaatatctt
      361 atcaagttct acggattcaa aataatatcc tgctgagtaa ggctgatgat agatgtaatt
      421 tccgtctttg tccattttaa gtatttcatc cagcggtatt agcttgactg aaaggccact
      481 ttgtttagaa gcaatagtga caaatgtctt accgtctgat tcagagaaat tcatatcttt
      541 gcgtttaaac tggatagtcg cttgtccgtc taaatcttgt aaggctaatt gtcccttatc
      601 tgtgaatcct aatattccat ctcctttaag tgattggaaa cgagcttcta aatctcccaa
      661 atttatttgg ctaccagttt ctactgttaa tgcctgttgg attggattga gtgattggct
      721 gtttagggag ataaaggaat tgttttttac tatgagattt gagatgtttt ttaactctac
      781 attacttgct ttgctattat taaaaataag ggttacctga ttggtttcag gtgcttggaa
      841 tttattgacc tgattacttt cggaagtgat tgtaacagga gaaggtgtag tcacttcgac
      901 accgttttta atttgtgtac catttgcaat cgcaatatct gcggcatttt ggacggtcat
      961 cttatcgaaa acagtttcat ttgtatttaa aattttcaaa ctggattcac gcttatcagt
     1021 tgtatctgct gatgaaccta tgataagact agggcgttta tcagtttgac gattggatat
     1081 aagagtggat acatgatcca ttgtcacttg accatctatg tagatgtttc cagggacatt
     1141 gctttctgtt aaagcatgaa tacttaaatt acgtagggta acgttatttg aaatttgaat
     1201 actctcatta aaaataatcg cattttcact gctatcactc tcaatggtaa ctgctttatt
     1261 gatgacgagt ggagttcgct cggtggcatt gccgaccagt ttgatgatag taccatctgt
     1321 agctttctgc aaggcttcag ccaaacttcc cataggggta tcttctgtca gtccttgtcc
     1381 gtttccgcca ttttttacat agataatgtc agattgtttt ggtgcttcaa agatactagc
     1441 ttctagattg ttaaactgta gagctttgtt tagaatatct aatttaactt tacggacatt
     1501 agttgctaac cgagcaactg aagctttttg agctgcttgg tctaactgcg tttgagtaac
     1561 agtggaacga ctgttaagta gactgttaat tgaatttcga taggtggtta atactgctaa
     1621 atcagctttt atagctgttt ctaactcttt ctccaattgg ctagtttgcc acaattgatt
     1681 aaccggttcc ttatcttcta accgtttata ttgcgctttt ttgaaactag cccaatctga
     1741 atattcgttt cctaagattg ctttaaaagc ttctgagtcg ctattgtatc tgttactaat
     1801 gtaacttata aaggcatccc agcctttcca tgccaatatt tcatatgcat gtcgcttgaa
     1861 agagatatct ccaacggtat tattgccact tggagcttct gaagcaccgt agaagctttc
     1921 tagaagtggg acatgatcat attggttatg acttaattcc gttaggatag gggaaattcc
     1981 acgagggata aactgaccac tgactgcatc ttggtcaacc aaatcattga tgctagttgg
     2041 tttagtaagt gaagcaaccg tcaactgccc ataggggaga aatgcatcgt tggtagaagg
     2101 gagactggtg gttgtcgtgc tagtgttaga agtggtattg cgaggtactt ggacgacctt
     2161 attgaaataa gtagctaatt cattctctgc tagggatttt aaagcaaccc tcgcttcaac
     2221 agcttccaaa taagcgacta aatcaacaag attttttgtg taatttgcta acttttctgt
     2281 agaagtttga ggtgttaatg cttgagtacg atttggactg tcagcaatag tgagagcggt
     2341 attcaaatta aagacaggtt tgtactcacc aggaacaccg ttttgtgtat tatcaattac
     2401 ttcaaataaa cctcgtgcat acacttcagg tccttgacca gctcgtcgac cttcttttcg
     2461 ataagttcca ccgaacaacc tagcctcatc gtttgtatga gtcatttcgt gagtgaacag
     2521 tgcgacacct gaaaggttac tgtgcataaa gcgtgtctcg taggctttaa tcatattttc
     2581 accgtttgca acacctccta gtccaactcc tgaacgaaca taattttccc agagattcat
     2641 tggagagaag aagttgagta ccgcagaatg tgcagaagtg ccttcgttag gtgaccaagt
     2701 gtgtgctttg gtggtctcgt tatagacatt catcgtatcg actgctagtg taaatggaat
     2761 agttgtacta tcttttttag cagagttaag gaaagtcaac caattttctt ggtaggtaag
     2821 gattttttcg aagaaagtag atgtaggttg ttgtacccca cgttccttgc tgtagttttt
     2881 caactcaggg tacaggtctg tatacgaatc taaaagccca agagtcaaac tgttgctagt
     2941 acctgcaagg taaacacctc taccttgaga gaggacaggg aggatatatt ctggtttatt
     3001 ggtttttaat aattcaaaga tggagatgtt tgggcttgtt ccaatcaaag cttgggactg
     3061 ttctgtaaag tagctattta catcttttcc tttagattga gctatttttt caactaattc
     3121 agcagtagat ttggtaccag tgtattgacc aatcatacgg ttattgaatt gtatttgatt
     3181 aagatttaag gcaagtgacc gtttatcagt aatgtgacca ccataagcca tcaatcggtc
     3241 ataggcactt gtctggtcag cttggatatt accgattgtg tggggagtaa agacaagagt
     3301 ttgtggtaaa tctttttcaa aggagtattg ttgctggagg tataggacac cacgatacag
     3361 ttgactaaga ttatttttta gagtttcaac tgtaagccct gatttttccg taagtagctg
     3421 accattgtta aatgcaagta gttgttggaa agtgtttttc gcctcaggcg caagagcttc
     3481 aatactcgca tcttcgtaga ggtttttgtt tgcttcaatc agcgctaatt ttgttgcttc
     3541 agcggacctt tcttggtcag tcaagtgctt gtaattagga tccgacttta gttgttttat
     3601 aagcggaaca aaatattttg ttaaatcaga aatacttaaa ctctctttag gttttacaac
     3661 atctagtaaa gctactttat cagcgctagt ttcaaagttt gtgagaataa ggttgttaag
     3721 agtttgtttc tcttcagcgt ttagagatgc tatcgtttta gacggagtga tgcttccatt
     3781 ttcaattgct tggatagcag tatcatttcc agtcacagta gttgtggggc ttgtattggt
     3841 tgcggcacga agggctgttg ttccttcgct tgtgttaggt tgctctgctt ttaaactggc
     3901 atcgatagtt tctattttag gggatgattc aggggaggaa agagcagtag tttccgttgg
     3961 gaactctact tcatttactg agctctctgt tgaagatgaa gttgtagtgg tgtcttcggt
     4021 atttgcaagg tggtcattct gactagtggt agattcaggt accgcttgtt ccgtacgggt
     4081 gcttttttcg gtatcagttt gtccctcgac cgtattattc acggtgactt cttcttgagt
     4141 agtagtttcc gtattttgaa tgctctctct attgttagga gtttccgtag gttgagtagg
     4201 gattgtttcc tcttcgcctg ttgcgttgct aataataact tcaacactat tttcagcggc
     4261 tgctacagta ctgtttcctt gagtaagaaa tgcaaatccg atacaaatgg acacaacacc
     4321 gattgataat ttttttatag aaaatctttg tttccgttcc atattttccc cttttctagt
     4381 tcatgtagtt atctagaata taacagaaat taagcgtttt cgcaagtagt atagtacccg
     4441 ttgtgctagt taattttagc caactaaaaa aactttgcgt atcataaact caaaataacc
     4501 acgaaatgag ggaataatat gcaaagccaa cattattatc tcgcaaatcc caatcaaaca
     4561 caagttattt tttcaaaaat cttgactcaa gttctcgctt tatatgagcg atttgttccc
     4621 catgaggttc gaaatcggcg aaacatccac ctacaaaaac agtctgatgt cgttgttatc
     4681 gctagttatc tttgggcaat tcaagagggc cgcaggacgg caagtgctat ttcccgtgcg
     4741 attcgtcata atctcttccc tgacaacttc ccagaacact cacgattttg ccgtatctgt
     4801 caaaatcttg ctcaaagtat tcagcgtatg cgctatttta tggtcttaga tctttgtcaa
     4861 acctgctcgt tcggcttgat tgacagcttt ccttgtgccc tatgtcaccc cattcgcaac
     4921 atgagagcta cattgttatc agaggtggca gatattggct ataatgcgac taagaaaatc
     4981 cattattatg gcttgaaatt ttcagttctt gtcagcgata gtgggtttcc tattgattat
     5041 gttatcacac ccgcatctat ttatgatggc gatgttgctt tggagctact tgaaaatagc
     5101 ccatttccaa tcgtttatgg agataaagga tatgtggata gacagacaaa ggcagcgtta
     5161 gtagactgtg gtatccagtt aatttctcaa ctcagaaaaa acatgatggg gtattcgtgg
     5221 ctagaaaatt acaaaataag tcgattgagg aaaacagtgg agactgtatt ttctagttta
     5281 gagcagtttg gaatggaggc tttacgttgt cgaaacattc aggcgctcaa atttaagaca
     5341 gaggcaatat tacttattta ttctcttttg cttaaaagca gtcatactga attcggtatc
     5401 agtttaaaat attcccttgc ttacgcttga ttaactagca caacgggtaa aaaataatag
     5461 tttttattgg tttcctgacg gttattgttg ggaaattttt cgttgtgata aatttgtcag
     5521 cattttcttt gcattgcatt ctttttattt atataattgt agtatatttt ttatttggtt
     5581 caaaaggaga ttttgatgaa tttacatttt ttacaaaaga agcagcattt tggaatccgt
     5641 aagttttcca tcggtgtcgt atctgttgcc ttggcaatta gctttagtgt tgctggaggg
     5701 caggttgcgg ctgcccaaga ggcaagccaa actcctgtta gtagccagca aactagtcag
     5761 gcagtgacag atcaagcaaa tcaactgcag gaaaccaatg aggtaactgt tcaaattcca
     5821 gaaactgttg gttcctcatt aaaccaagcc acacaggaga acccagctca agaaagccag
     5881 cttgtggaag tagaaccagc tattcagaag gaagtggttt ctcaagatat ttcagcaccc
     5941 caagcagcac tttcagcaga agcagggcaa gaacagactg cagaagagca gtcaaataca
     6001 gctggtgatg agagcactct cacagtcgaa aattctcatc agattattga gcaagtagaa
     6061 ccaaaatcta ttcaaacggc acaagaacca gcgggttcaa cggacgaggt tactcaacca
     6121 gttcagccaa ctgagacagc aacagtagaa gaagtcgttc agcctgtgtt acgttcagca
     6181 cgaagagcac gcagtgtggc agctcaggag ttggctaaac tgccactaga tgcccaaggt
     6241 caactgatgc cttcggttaa tggtaaaaca gttcatcagt accaagtagt ttattctgat
     6301 ggcagtagtc agcttgtagc tgcacaaact acagatcaaa ctcaggcaaa ttcagatatt
     6361 tccaataagg tcaaccaaat taagcaagag ttatctacaa tcacatatga ttcgctttat
     6421 ccgtctttga ataatcgtga gagaatttac gataagacgg aaatggacct tattattgct
     6481 aaagaaaatc caggtcggac gttaacggag gaagaaaaga ttgttcttcg caacaaatat
     6541 tacatggatc aactggatat gcgcgatagc tttgcgcgtg ttcaggggga tttagagacc
     6601 atcctaacgg ggatttttga gaaatcaaaa caagttgata ttgaaactat caaaacaaat
     6661 aaagagaagg tcttactcgg tttgacttat cttgaccgtc agttttcttt caaatttggg
     6721 aattatcaag ccaaggattt cattctctac catcctgaag tttttggtgg aactggggat
     6781 gtgctgacca atctatacac tattggtagt cagaactatc aggatttatt attggctcaa
     6841 agtgcaacaa cctttaaaaa taaggtggct agacagcttg gacaaacaga tgtatttagc
     6901 tttgtggaaa aaggattgtt aatctttgat aaggacaaga cagcttctga atggttgaaa
     6961 gaggaatcga aggcgctgat tgttgaggca gcgaatagct atggacttac aacatctctt
     7021 tatgataaat tgaaatcgga tactagatta aacaatcatt tattgccact tcttagttta
     7081 ccgagttcgt ctatttatgc actatctact tctaacaccg taacctatgg tttaacagaa
     7141 acctatttgg atcaggcacc tgctaaccaa gagtttgaac aaaaactttc tgactatgct
     7201 catcaccagc aagaattttt aaacttctgg tatcggatga ccgagaagaa gcaagagttt
     7261 acgaactatt ctccgattat tgtagttgat actgttcaaa aatatggtcc atctaggaat
     7321 gcaagtgaat tgtattcgcc aaaatttggt tccaatgttc ttaaaggtgt gagggagttt
     7381 attcgtccat taaatctcta tgcaaagttt gcgtttgcag gaggtcaagc taatggaacc
     7441 aacagcatga acaatttcct ctataagtca ttaactgatg atggtcatgc tgtctatacg
     7501 catgagctaa cacatatgtt ggataaaacc atatggttaa atggtttcgg aagacgaaca
     7561 ggacaaggag cagaagtttt tgcaagggga ttatttgaat ccttgaatat gtctgcttca
     7621 tctatctctg atccgatttt taacctcaat actgcctatc agttggggga caatcgaaca
     7681 caaaatgcta gtccagaacg ttttcaaact agcgaggatc tcaagaccta tatgcaaggt
     7741 atcttggatg tcctctatac tttggattat gcagaggccc agtctatctt gaaaaagaca
     7801 ccggaagaaa gggcagtttt gctcaataaa attagcctta ttccaaatcc agccaacaat
     7861 ggtgtaggaa ataccactga aactgtaaac tccattgata cgaccttagc agctagtttg
     7921 acctctgtct cagattttgt ggatcagagc cttatttcag gtcgttataa gtttgatggg
     7981 cttaacacaa ggggtacagc tcgtactaac tcctactata ctattcctct ctttgaaccg
     8041 atttatgctg cccttcaaaa tgatacgggt agcggtggtg atattagctt taagagaaat
     8101 gcctacgaaa ttttaggtga atacggctat gaaaatggta tggtagccta cttgtcagat
     8161 caacatgcca atgatcaggc ggccttgaat gctataatgc cagaatatga tggtaactta
     8221 gcggcattta agaaggcgat gtttgcacgt cgtatcgata aagttaatca actgaacccg
     8281 actgctgtgg cgacagattt ctcagcgatc caaagtttaa tggaccaggc agtgaccaag
     8341 gatttggctc agctgcaaac taatcaggca agaaacactt ttttgtcaca aaacgtcaat
     8401 gctgttagag agttgaaaaa tcagattttc caagaatacc tggctatgac caatgatttc
     8461 caaagcagta tctataagga aaaagaagcc agccgtacct tctatgtgac caacggtcag
     8521 gaaagttcga cagaaggggc agggacagag gccaaccctt accacagcct gtcctatgcc
     8581 ttgcaacagg ctagcgatgg tgatgtcatt aagctggtgc gaaatgtgac ccaccgtcaa
     8641 gatgctccgt ttgtcatcaa taaggctgtg accattgacg gtcaaggcca caccttaacc
     8701 ttccgcggac cagatctgga attgggagcg gcggttacct ttaccaatat gactctcaac
     8761 atgattccga gtggtagtca ccagccaacc atctatttga atggctatca ggcaaccttt
     8821 gatgcggtgt ccacaacggt caatcagtta caggacaaac tgcgtccgac catcgttgca
     8881 ggggctcgta ctggggaagc gacgggtgac catgctcgct tactggttgt aaatggtgat
     8941 tccaataccc gtttccgtca gatttttgca ggaaatgcag atagttccag ttccatcccc
     9001 gtgaccatca ccattgattc cgagtttgct ggagtagatg agggaattga ttttggtggt
     9061 caacatgaca atgttaccta tggccgagtg gaattgattt cccgttcgac caaggttaaa
     9121 gaggtcgtgg cgaccaatag tatggacaat caggtgacga taaaagcagt gcgcctctat
     9181 ggagctcatc tcacagatat tcaagactta catttagcgg aaaatgcaga tgtgacctta
     9241 tctagccagg tggatagtat tgtaggacag gttaatattg agagtagaag taaactccaa
     9301 ctggatgccg gtgctgtact tcaagttggt ggtctgtcag gagaaggtat cctttctctt
     9361 ctagccgata acgtgctaac tgttactggt gatctgacag ggactgtcca gatagagata
     9421 cgagattttg agcaaaatct atccaagcag gtgggtaaaa tactggtaac aatagaaggc
     9481 ttaacggaac aggccgatgc tgttcgtcta gtgaatgcct atggtcagta tgcacttgta
     9541 gaagaaaatg gtcactaccg tctggctagt caggaccagc agcctcagac tcatactctt
     9601 accttgcgat ttatccaggc cgagcaggtg ttgaaatcag agcaggtaca ggttgtggac
     9661 ggtcagtcgt tggccaatgt ggaggcttat ctgccccagg cggccacggg aacttaccag
     9721 ctggctccga cctttgatcc gtctgttttg acgggaattt ctgccagtca gaccattgat
     9781 attcctgtgg tgctggtgat tccagccact ccgattttgt cttttgataa aacttccatt
     9841 caagagatga cacttgttca gggcttggat aagagcagtt accaagaagg ggaaatcttg
     9901 gacttgacag gggtgcgtgt gcgattggta gaccagcagg gaattgcctt ggtgattgat
     9961 gcgacacgtt ttactgagta tggtgttagt gccaatcctg ttggaactcc gcttttgagc
    10021 agtcagcagg agttgacttt gaccttggga aatcatgttc tttcgctacc gattcaggtt
    10081 caggcacaac tgccttctaa ggccagtcgt tttcaaccgc ttgtttcagg agaggttata
    10141 gtttggccga gcgacagtaa tcagacacaa aagagtcagg tcttacaagc aattagactg
    10201 ccaaatgagg ctggtagtgt taatctggaa gtggtaggag ttcttccaac ggctagtgga
    10261 gattatagcg ttaccattcg agtgacctat gatgatcaga gccaggaaga agttgtggtc
    10321 cctctacata ttctctctat tgacaagggc tcgggcgtca cacatgaatt gccaatcggt
    10381 gttctttcta aatcggatcg ctaccagcca caagtaactg gagaagcccg tgtccttcca
    10441 gcaagcagta gtgatgatgc aacggctgaa attgttaagc agatcagtct accagctgaa
    10501 gcaggtcaat ttgatgttgt agtagtcact cctattccac agtctagtgg tgactactcc
    10561 atgattgttc gggtggtcta tgatgatcgc agccaagacg agatagtagt accacttcat
    10621 attttcaaaa tggaaaacgg taagggagtc acacatgaat tgccaatcgg tgttcttcct
    10681 ccgttggaaa caaccaaggg cgatggagtt acacatgaat taccaatcgg cgttcttccg
    10741 tcattagaag tagctttaga gaaggggtta ggagaaaata gtccgaagcc agccgcaaaa
    10801 gaaatggcag tctctgtgag tgtcgtggga cagcaaaaat tcgctaaagg acagttacct
    10861 aaaacagggg ataggaataa tcttttactg gttggcgtaa tgcttgcaat ctttaattta
    10921 atcttctgga tgccgggtaa gaaacctcac caagtagaag agaagtagta atcattcatt
    10981 cttttgctct atcagcatag gaagaaagat ttgttttccc ttaaatgcta ccaatcgaat
    11041 gttatcctaa ttttaaaggc agaagctaaa tgtattagtt tctgcttttt taggcttaac
    11101 aagagagttg aatgatagat ttttattgag tattatcaat gagtttgttt tctaattcta
    11161 attcaaatgg tataatttat taagaattag aggtatacat gttagttatt gaacagattg
    11221 aaaaattaaa aaaagagaaa ctagagcttc tgaccgtttt atgcggtgaa gacatcggac
    11281 aataccaaat agcgaaagac ttacttctga ggaagcttga tttcgaacct gcagacctta
    11341 gttttgccta ttttgacatg tcagaagctg attatagtca ggtggatttg gatttggttt
    11401 ctctcccatt tttttcagac gaaaaagttg tcatactgga ttatttttct gatttgacca
    11461 cagacaagaa gcggcatttg acagacgatg agcttaaaca gtttgaggtt tatttggaaa
    11521 atcctgtcga aacaacacgt tt
//
LOCUS       DASFQD010000075        11503 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.076, whole genome shotgun sequence.
ACCESSION   DASFQD010000075 DASFQD010000000
VERSION     DASFQD010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11503
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.076"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..4206
                     /locus_tag="U1021_001522"
     CDS             <1..4206
                     /locus_tag="U1021_001522"
                     /inference="COORDINATES: protein
                     motif:HMM:NF017180.1,HMM:NF019216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712046.1"
                     /translation="PPSTEVEVQPEEPTAPVVPSAPVTEEPEEPIKTKPELVLSILKE
                     NVDDKSVELSYTLTDSDSTFVKVLVSLYKGDELVTEIAIQAKDELDKVRFTELLLNTE
                     YTVKTRFTYNLGNEDVEEDLPTEKIELENKLLELREYKSIELYQVDEFGEKTRVTALS
                     NLPTSVENYLVKIATVNNKEIYLPVDNFENDVNGIKVSIIHPKLVKFNQNNSSFDEHH
                     TFTVDKLVLQEGAYSKFSELVDAINNNPSGTYYLAADMVVDKEVSTDTYITKEFTGSL
                     KSLGDHKTYSILQLDRPLFSTLKNARVENISLKDVSIKNNQTAVAALAKKADKATIDK
                     VTVSGNITAKQNIAGLVYEATNGTSISNSIIDVSLGNTASYETYYMGGVTGILNSSTI
                     DKVRVNVAIDAKTASGRGQKIGGVTADMILSMITNAYVTGNIQATAPADTGGVVGTAR
                     MSVLNNIVTGASVTNGGIIASGQNAYATVGSTISNLYSVEGHAAGQPNPTIQSTSLSQ
                     EAVLEKIKAWGIPTTPTTTGQENSDSQSNSVQTIDYNQVQNAQAKRRTAYENTSKLLP
                     FYDRNTIVKYGNLIDEASNLYSKPIQSVLTLNEDGVATNIYDQHASLTKLLIHYEDGT
                     SEVLPLVFKGEYGNTKVVEYRLGEQLLYTPEQLLSLETSLIDDLVQEFSQVELYSEKM
                     AEVLHIKTADKHAKLKDLYLDESFAEVKANLEEHIKGLLANRLVVDTTSKAIRDVIKK
                     EFLADKEKIMFALAYLNRLYGIKYGDINIKNIVLHHADFYKRQLDTLGWLRSFTDKLT
                     KHDDQFYVSQKGYEDMYFDRLTLANNAAIHKERFGALSSQFGTVRDFLEYNKKLFLGE
                     TDSRKWFKEATNAFVYEIPSNANSSIDTSLYSHLGRIPRYEKYYLPLLNIKEKDDIFV
                     MSSMATVAFGGYGRYVDTALKKTNPEQYYQAVKTVQTSLIPKHGKRLGDFLDMWYQMA
                     DSHLRDKFIQRSTEIWDGYWIKDSNAFEDQTDKRRWADKYDQEYRYVQELAGALNEWH
                     RKSNDSAFSDTVTFVKFSNRDMLSDLGDSTMSHELVHNYDETIMLDGHKRRPGQDAES
                     YAMGLLQSSAGGGIYYYGFNFMNEHSPNTPHNVSSSRFKTKEDLQTYLKGIFDVTYLL
                     DAVEIEAIATKGKEAYPYFFNKIELVPATEAHTNQIPGYQNTHDRIRKLSDVELANLN
                     ISTINDAIDHALVAKTSLLPEQDYLRENLKNYYFVPLYYPIYAGLQNNSGTVGGLQFR
                     KTALELLAAKGWEEGFIPYATDKLKAEAEAAGRPLSDQFIFEKIFANQYADYTSFKKA
                     MYKERWDKKDRLKAITISFNGQTETIDNIETLSRLMAEAVDKDYQAAQNGQIGFNRQG
                     LKDAILKAYVKLTDSFSSSIFGE"
     gene            4338..4712
                     /locus_tag="U1021_001523"
     CDS             4338..4712
                     /locus_tag="U1021_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002305392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1149 family protein"
                     /protein_id="HEM4712047.1"
                     /translation="MEIIRDKEFVNQYHFDARNHAWEKENGIPETKLKVDFQLIEQNR
                     AENRTSMITILRFMIVLEHFVISGAMSQAVHLPNRLVEEPTEFTDEEKRVLVEPLLDI
                     LKRMTYEVTEIAFDAPGVNLEF"
     gene            4714..5565
                     /locus_tag="U1021_001524"
     CDS             4714..5565
                     /locus_tag="U1021_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEM4712048.1"
                     /translation="MKLAVITDSSAVLNVQSIERDDLFVLSIPVSIDGENYIEGQNLT
                     VEEFYQKMASSKELPKTSQPSLMELEEILRGLKDKGYTHALGLFLSSGISGFYQNIQY
                     LADEFEGLTVAFPDTKITSAPLGMMVENVLKWADSGLSFEEILGKLDQEIGKTTAFIM
                     VDDLNHLVKGGRLSNGAALLGNLLSIKPILYFTDEGKIEVYEKVRTEKKAIKRLIEIL
                     QEQTTEGQYQIAIIHANAPQKAKNFKQQLEEAGVGSDLPIVSFGSVIGTHLGEGAVAF
                     GISPIIE"
     gene            5574..6341
                     /locus_tag="U1021_001525"
     CDS             5574..6341
                     /locus_tag="U1021_001525"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002262893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEM4712049.1"
                     /translation="MTIKVIIAGFKGKMGSTAVEMVKGDAALSLAALVDPFATETEVD
                     GVPVFKTKEEVASLEADVWVDFTTPKFAYENTRFALENGFAPVVGTTGFTPEEIEELT
                     ALSAEKGLGGLIAPNFAIGAILLMQFAAQAAKYFPNLEIIELHHDKKKDAPSGTAVKT
                     AELISQVRQSQTQGAADEEELIAGARGAEFDGFRIHSVRLPGLVAHQEVIFGAQGEGL
                     TIRHDSYDRISFMGGVNLGIKEVVKRSQLVYGLEHLL"
     gene            6338..7549
                     /locus_tag="U1021_001526"
     CDS             6338..7549
                     /locus_tag="U1021_001526"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HEM4712050.1"
                     /translation="MKLNNLPSEFQEALPILEKIKAAGYEAYFVGGSVRDAILGRPIH
                     DVDIATSSYPQETKQIFSRTIDVGIEHGTVLVLEGKKEYEITTFRTEEEYVDFRRPSQ
                     VSFVRTLEEDLKRRDFTVNAFALDEEAQIVDLFDGMNDLKNRTLRAVGIPAERFNEDA
                     LRIMRGFRFAATLDFEIEPTTFTAMVETAPLLEKISVERSFIEFDKLLMADFWRKGLR
                     AMIDSKAYDFLPDLARKGEQLASMLSSLTEEFCFSTSEQAWAMLFVCLGIDNIKSFLK
                     KWKTSNDFQRSVVKLVEIYQLRQAGPVTKQICFKYGKEFLYLVEELRQAQGLVTEFEA
                     IDQIDRALTIHDKHEIVVNGGHLMKAFDLKPGPVLGELLKEVEFQIVEGQLENEEQAI
                     MTFVKGILENE"
     gene            7542..9410
                     /locus_tag="U1021_001527"
     CDS             7542..9410
                     /locus_tag="U1021_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM4712051.1"
                     /translation="MSDFIVEHLTKSVGDKTVFADLSFIIHQGDRIGIIGVNGTGKTT
                     LLDVLSGRIGFDGDVSPFRTKNAYKIAYLTQEPDFDESKTVLDTVLSSDLRETQLIRE
                     YELLLSHYDEASQARLEKVMAEMDSLNAWEIESQVKTVLSKLGLTDLNKTVAELSGGL
                     RRRVQLAQVLLGNADLLLLDEPTNHLDIDTIEWLTTFLKNTKKSVLFITHDRYFLDNV
                     ATRIFELDRANLTEYQGNYQDYVRLKAEQDERDAALRHKKEQLYKQELAWMRRQPQAR
                     ATKQQARINRFHDLKGDLANKIDDSELEINFETSRIGKKVINFENVSFSYPDKPILED
                     FNLLIQNKDRIGIVGDNGKGKSTLLNLIAGDLQAHSGKVDIGETIRIGYFSQTIKGLD
                     ESKRVINFLQEVAEEAKTTSGMVSIAELLEQFLFPRNTHGTLIEKLSGGEKKRLYLLK
                     ILLQRPNVLLLDEPTNDLDIATLTVLEHFLQGFTGPVITVSHDRYFLDKVANKILAFE
                     DDGIQTFFGNYTDYLDEKAFLASSSAISLEKPKEKTEKIKENKKRMSYFEKQEWATIE
                     EDIAGWEERIATIEAEMLTCGSDFTKLSDLQKELDEKNDLLLEKYERYEYLSELEG"
     gene            9411..9746
                     /locus_tag="U1021_001528"
     CDS             9411..9746
                     /locus_tag="U1021_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712052.1"
                     /translation="MKVLVMSYMVIYLLVTLGAALFSYFKTKKMNALRLILTILSMIL
                     LANTLYFYSQSYHDLQMVGFALGFTFISTLFLYNGTKEGSNFTTVMLFSIGRFILHIQ
                     FLILLYLFR"
     gene            9840..10799
                     /locus_tag="U1021_001529"
     CDS             9840..10799
                     /locus_tag="U1021_001529"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000078546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family glucokinase"
                     /protein_id="HEM4712053.1"
                     /translation="MSKKIIGIDLGGTSVKLAILTTEGEIQEKWSIKTNILDDGSHIV
                     PDIIESIQHRFETHGLTKDDFLGVGMGSPGVVDSEAGTVIGAYNLNWKTLQLVKDQFE
                     SALGLPFFIDNDANVAALGEQWVGAGNNNPNVVFMTLGTGVGGGVIAAGNLIRGVKGA
                     GGELGHITVDFNEPFACTCGKKGCLETVASATGIVNLSRRYADQYAGDAKLKQMIDDG
                     QNVTAKDVFDLAKEGDNLALIVYRHFSEYLGVACANIAAVLNPAYIVLGGGVSAAGEF
                     LLDGVRKVFAENSFPQIKESTQIVLATRGNDAGVLGAASLVLK"
     gene            11214..>11503
                     /locus_tag="U1021_001530"
     CDS             11214..>11503
                     /locus_tag="U1021_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712054.1"
                     /translation="MNLTLLKRLNLVLYGIVIFLFVMLFLPIGQWFDIVNVNFKLTFF
                     IIPFFGLASLPTAIYTKNVRQILLSVLLVTLYFILFSLITALSGLFHLNFYS"
BASE COUNT         3499 a         2131 c         2556 g         3317 t
ORIGIN      
        1 ccaccatcaa cagaagtcga agttcaaccc gaggaaccaa cagcgccagt tgtcccaagt
       61 gccccagtaa cggaagaacc agaagaacct attaaaacca aaccggagtt agttttatca
      121 attcttaaag aaaatgtaga tgataagagt gtagaactaa gctatacact gacagatagt
      181 gattccacat ttgtcaaggt tttggtatct ctatacaaag gggatgaatt agtcacagaa
      241 atcgctattc aagctaaaga tgagttagat aaggtgcgtt ttacagaatt attactaaat
      301 actgaatata ctgttaaaac aaggtttact tacaatctag gcaatgaaga tgttgaagag
      361 gaccttccaa cagaaaaaat tgaactagaa aataaattac tggaattacg agaatacaag
      421 agtattgagc tgtatcaagt tgatgaattt ggtgagaaaa caagggtcac agccttgagt
      481 aatcttccaa cttctgtaga aaattatctt gttaaaattg ctactgtaaa caataaagaa
      541 atctacctcc ccgtcgataa cttcgagaat gatgtcaatg gcattaaggt gagcattatt
      601 catccaaaat tagtaaaatt taatcagaac aattctagtt tcgatgaaca ccataccttt
      661 acagttgaca agcttgtctt acaagagggg gcctacagta aatttagtga attagtagat
      721 gctatcaata acaatcctag tggaacttat tatctagctg ctgatatggt tgttgataag
      781 gaggtttcga ccgacaccta cattaccaaa gaatttactg gaagtctgaa gagcctgggt
      841 gaccacaaga catattctat tttgcagttg gatagaccgc ttttcagcac gctcaagaat
      901 gctagggttg aaaatatctc cttgaaagat gtgagcatta aaaataatca aacagcagta
      961 gctgccttag caaaaaaagc agataaggct accattgata aggtcaccgt ttcaggaaat
     1021 attacggcca aacaaaatat tgctggtttg gtttacgaag caacaaacgg tacaagcatt
     1081 agtaattcca tcattgatgt cagtctaggt aacacagcaa gctatgaaac ctactatatg
     1141 ggtggtgtta caggaatact aaatagttca accattgaca aggtaagggt taatgtggca
     1201 attgatgcta agactgctag tgggcgaggc caaaaaattg gcggtgtcac tgcggatatg
     1261 attttatcta tgattaccaa tgcctatgtt acaggaaata tacaggctac agcacctgct
     1321 gatactggag gtgttgtagg tacagctagg atgtctgtct tgaataatat agtaacaggt
     1381 gcatctgtta caaatggggg aatcatcgct tcgggtcaaa atgcctatgc aactgtaggg
     1441 tccaccataa gcaatctgta tagtgttgaa ggtcatgcag caggccaacc aaatcctacc
     1501 attcagtcta caagcctttc tcaagaagcc gtgctagaga aaatcaaggc atggggaatt
     1561 ccaacaacac caaccacaac aggacaggaa aatagcgaca gtcagtcgaa ttcagtgcag
     1621 accatcgatt ataaccaggt tcaaaatgct caggctaaac gaagaactgc ctatgaaaat
     1681 acgtctaagt tgttgccatt ctatgaccgg aatacgattg ttaaatatgg taacttgatt
     1741 gatgaagcaa gtaatctcta tagcaagcct atccagtcag ttctgacctt gaatgaggat
     1801 ggagtagcaa caaatatcta tgaccaacac gcttccttga ccaaattact aatccattat
     1861 gaagatggaa cttcagaagt tctgcctttg gtatttaagg gagagtacgg caataccaag
     1921 gttgttgaat accgcttagg tgaacaactt ctctatacac cagaacaatt actatctctg
     1981 gaaacaagtc taatcgacga cctagttcaa gaattttctc aagttgaact ctatagcgaa
     2041 aagatggccg aggttctaca tatcaaaact gcagacaagc acgccaaact aaaagacttg
     2101 tatttagatg aatcctttgc agaagtcaaa gccaatcttg aagaacatat caaaggtttg
     2161 ctggccaata gactggtagt tgataccaca agcaaggcta tcagggatgt cattaaaaaa
     2221 gaattcttgg cagataaaga aaaaattatg ttcgcccttg cctacctcaa taggctatat
     2281 ggcattaaat atggagatat caatatcaag aatattgtgc tccatcatgc ggatttctat
     2341 aagcgtcaat tagatacttt aggctggttg aggtcattta cggataaact caccaagcat
     2401 gatgatcagt tctatgtttc gcaaaaaggc tacgaagata tgtattttga cagattaaca
     2461 cttgccaata atgcagccat tcataaggaa cgttttggag cactctctag tcaatttgga
     2521 acagttcgtg atttcttgga atacaataag aaattgttct tgggagaaac tgattcaagg
     2581 aagtggttta aagaagcgac caatgccttt gtttatgaaa ttccatccaa tgcaaactcg
     2641 agcattgaca ctagtctata tagtcatctg ggacgtattc cacgctatga aaaatactat
     2701 ttgccattgc tgaatatcaa ggagaaggat gatattttcg taatgagctc aatggcaaca
     2761 gtagcctttg gtggttatgg aagatatgtg gatacggctt tgaaaaagac caatcctgaa
     2821 caatattacc aagcagttaa gacagtacag acaagtctga taccgaaaca cggaaaacga
     2881 ttaggtgact ttttggatat gtggtatcag atggcagatt ctcatctaag agacaagttt
     2941 atccaacgct caactgaaat ttgggatggt tactggatca aggattcaaa tgcatttgaa
     3001 gaccaaactg ataaacgtcg ttgggcagat aagtatgacc aggaataccg ctatgttcag
     3061 gagttggcag gtgccttgaa tgaatggcat agaaaatcga atgatagtgc cttttcagac
     3121 acagtaacct ttgtaaaatt ctcaaatcgg gacatgctat cggatttagg tgattcgacc
     3181 atgagccatg aattggtcca taactatgat gaaactatca tgttggatgg tcataagcgt
     3241 cgtcctggtc aagatgcaga atcctatgct atgggcttgt tgcagtcatc agctggtggg
     3301 ggtatttatt actatggatt taatttcatg aatgaacata gtccaaatac cccacacaat
     3361 gtttcaagta gtcgcttcaa aacaaaagag gatttgcaaa cctatctaaa aggaatcttt
     3421 gatgttacct acctcttgga tgcggttgaa atcgaagcga ttgctactaa ggggaaagag
     3481 gcttatcctt acttctttaa caagatagag ttggtcccag ccactgaagc acacaccaat
     3541 cagattcctg gctatcaaaa tactcatgat cgcattagga aattaagtga cgtggaacta
     3601 gctaatttaa atattagtac gatcaatgat gccattgatc atgccctagt tgccaaaaca
     3661 tcactgttac cagagcaaga ctatctacgt gaaaatttga agaactatta tttcgtacca
     3721 ctttattatc cgatttatgc aggcttgcaa aataatagtg gtactgtcgg tggtttacaa
     3781 ttccgtaaga cagccttgga acttcttgct gcaaaaggtt gggaagaagg ctttattcct
     3841 tatgcaacag acaagctaaa agcggaagca gaggcggcag gtcgtccatt atccgatcag
     3901 tttatttttg aaaaaatatt tgctaatcaa tatgcggatt atacaagctt caaaaaagct
     3961 atgtacaaag agcgctggga taagaaggat agactgaaag ccatcacgat tagcttcaat
     4021 ggtcagactg agacaataga taatattgaa acgctgagta ggctgatggc ggaggcagtt
     4081 gataaagatt atcaggcagc tcagaatggt caaataggat ttaatcgcca aggtttgaaa
     4141 gatgctattt tgaaagccta tgtcaagcta acagatagtt tcagttcctc tatatttgga
     4201 gaatgatgga agtctgctct atatacaaaa tgggaagaaa ttgaaagata atattttcgg
     4261 tttcttcctt ttatttttta aatcttcaat acattatggt ataatatgca taatattgtt
     4321 tataggagaa gttagaaatg gaaatcattc gcgataaaga atttgtcaat cagtatcatt
     4381 ttgatgcccg caatcacgcg tgggaaaaag agaacggaat tccggaaaca aaattgaaag
     4441 ttgactttca attgattgag caaaatcgtg cggaaaatcg aacatctatg attaccattt
     4501 tgcgctttat gattgtacta gagcattttg tgatttcagg tgccatgagt caggccgttc
     4561 acttaccaaa tcgattggta gaagaaccaa ctgaatttac tgatgaggaa aaacgtgttt
     4621 tggtagagcc tcttttggac attttaaaac gaatgactta tgaggttact gaaatcgcct
     4681 ttgatgcacc aggagtgaat ttggagtttt aatatgaaat tagcagttat aactgactca
     4741 tcggctgttt tgaatgttca aagtattgag cgggatgacc tgtttgtcct aagcattcca
     4801 gtcagcatcg atggggaaaa ttatatcgaa gggcaaaatt tgacggttga agagttttat
     4861 caaaaaatgg cttcatctaa agaattacct aaaacaagtc aaccgagttt gatggaattg
     4921 gaagaaattc ttagaggctt gaaagataaa ggctatacac acgcacttgg cttatttttg
     4981 tcatcaggta tttcaggttt ttatcaaaat attcaatatt tagctgatga atttgaagga
     5041 ttaaccgttg cctttccaga taccaaaatc acatcggctc ctttaggcat gatggtagaa
     5101 aatgttctca aatgggctga ctctggactt agttttgaag aaattttagg taagctggac
     5161 caagaaattg ggaagacaac agcctttatc atggtcgatg accttaatca cttggtaaaa
     5221 ggtggtcgct tgtccaatgg tgcagccttg cttggcaatc ttttgagcat caaaccgatt
     5281 ctatacttta cagatgaagg taagattgaa gtttatgaaa aagttcggac agagaagaag
     5341 gccattaaac ggttaatcga aattctccaa gaacaaacaa cagaagggca gtatcaaatt
     5401 gctatcattc atgccaatgc acctcagaag gctaaaaact ttaaacagca attggaagaa
     5461 gcaggtgtcg gtagcgattt gccaatcgtg tcatttggtt cagttatcgg tacacacttg
     5521 ggagaagggg cagtggcctt tggtatttct cccattattg aataggagtt tgcatgacaa
     5581 ttaaggtaat tatcgcagga tttaaaggga aaatgggctc aacagctgtt gagatggtca
     5641 aaggcgacgc agcacttagt ctggctgcct tggtggaccc atttgcgaca gaaacagaag
     5701 tagatggtgt tcctgttttc aagaccaaag aagaagttgc cagcctagaa gctgatgtct
     5761 gggtggattt tacaacgcca aaatttgcct atgaaaacac tcgttttgcc ttggaaaatg
     5821 gtttcgcacc tgtggttgga acgacaggat ttacccctga agaaatcgag gaattgaccg
     5881 ccttatctgc tgagaaggga ttgggtggct tgattgctcc taactttgct attggcgcta
     5941 tcttgctcat gcaatttgca gcacaggcag ccaagtattt cccaaatctt gaaatcatcg
     6001 aattgcacca tgacaagaag aaggatgcac cgagtggtac ggctgtcaaa acggccgaac
     6061 tcatttcaca agtccgtcaa tcacagactc aaggtgcagc ggatgaagaa gaactgattg
     6121 ctggagctcg tggggcagaa tttgacggct tccgtatcca ctcagtacgc ttgccaggcc
     6181 ttgttgccca tcaggaagtg atttttggtg cgcaaggtga aggcttgacc attcgtcatg
     6241 actcttatga tcgtatttcc tttatgggcg gtgtcaatct cggcattaaa gaggtagtca
     6301 aacgctcaca actcgtttat ggtttggaac acttattatg aaattaaaca atctgccttc
     6361 tgagtttcag gaggctttgc cgattttaga gaaaattaaa gcagctggtt acgaggctta
     6421 ctttgttggt ggctccgtgc gtgatgccat tctcggtagg cctattcatg atgtcgatat
     6481 tgcgacatcc agctaccctc aggaaacgaa acaaatcttt tcacggacta ttgatgtcgg
     6541 aattgaacac ggtacggtgc tagtattaga ggggaaaaag gagtatgaaa ttaccacctt
     6601 tcggacagag gaggagtatg tcgacttccg cagaccgagc caggtttctt ttgtgcgtac
     6661 cttggaagag gatctgaaac gccgcgattt cacagtcaat gcctttgctt tggatgaaga
     6721 agcacagatt gttgatctct ttgatgggat gaatgactta aaaaaccgca ccctacgagc
     6781 tgtaggcatt ccggctgagc gtttcaacga agatgccctc cgtatcatgc gtggatttcg
     6841 ctttgctgcg accttggact ttgaaattga gccgactacc ttcacagcta tggttgaaac
     6901 cgcaccactt ttggaaaaaa tctcggtgga acgtagcttt atcgagtttg ataaactctt
     6961 gatggcggat ttttggcgaa aaggcttgcg cgctatgatt gattccaagg cttatgattt
     7021 cttgcctgat ttagctcgaa aaggagaaca gctggctagc atgctgtcca gtctgacaga
     7081 ggaattttgc ttttcgactt ctgaacaagc ctgggccatg ctctttgtct gcctaggtat
     7141 tgataacatc aagtcctttc tgaaaaaatg gaaaaccagc aatgatttcc aacgcagcgt
     7201 ggtcaagttg gtagagattt atcagctccg ccaagcagga cctgtcacta aacaaatctg
     7261 tttcaagtat ggcaaagaat tcttgtactt agtagaggaa ctccgtcagg cacaaggtct
     7321 tgttactgag tttgaagcaa ttgaccaaat tgatcgagcc ttgaccatcc acgacaagca
     7381 tgaaattgtt gtcaatggag gacatctgat gaaggcattt gacctcaaac caggtccagt
     7441 attgggagaa ctactcaaag aggtggaatt ccagattgtg gaaggacagc tggaaaacga
     7501 agagcaagcg attatgacat ttgtgaaagg aatcttagag aatgagtgat tttattgttg
     7561 aacatctgac taaatctgtc ggagataaaa cggtctttgc tgatctgtct ttcatcatcc
     7621 atcaaggcga ccgtatcggg attattgggg tcaatgggac aggaaagacg acattgttgg
     7681 atgtcctgtc aggtcgcatc ggttttgacg gagatgtatc accttttcgt acaaaaaatg
     7741 cctataaaat tgcctatctg acccaggaac ctgattttga tgaaagtaag acagttttag
     7801 acaccgttct ttcatctgac ctccgtgaaa cccagctgat tcgtgaatac gagttgctct
     7861 tatctcatta cgatgaagcc agtcaagcaa gattagagaa agtcatggct gagatggatt
     7921 ctctcaatgc ttgggagatt gaaagccagg tcaagactgt cttgtcgaaa ctcgggctaa
     7981 cagacctcaa caaaaccgtt gctgagttat cgggtggtct acgtagacga gtgcaattgg
     8041 cccaagtcct ccttggcaat gctgacttgc tcttgctgga tgaaccgact aaccacttgg
     8101 acattgatac cattgaatgg ttgacgactt tcttgaaaaa tactaaaaag tctgttctct
     8161 ttattaccca cgatcgctat ttcttggaca atgtggcgac acggattttt gaattggacc
     8221 gcgccaactt aaccgaatat caaggaaatt accaggacta tgttcgcttg aaggcagaac
     8281 aggacgagcg agatgccgcc cttcgccata agaaagagca gctctacaag caggagttag
     8341 cttggatgcg cagacaacct caagctcgtg ctaccaagca acaggctcgt atcaatcgtt
     8401 tccatgacct caaaggcgat ttagccaaca agatagacga tagcgagctg gaaatcaatt
     8461 ttgaaacctc tcgtatcggt aaaaaagtca ttaactttga aaatgtcagc ttttcctatc
     8521 ctgacaagcc cattttagaa gactttaacc tgctcattca aaacaaggac cgcatcggta
     8581 ttgttggtga taatggtaaa ggaaaatcta ccttactcaa tctaatcgca ggtgatttgc
     8641 aggcacacag cggtaaggta gatattgggg aaaccatccg cattggttat ttttctcaga
     8701 ccatcaaggg cttggacgaa agcaagcggg tcatcaattt cttgcaggaa gtggcagaag
     8761 aagctaagac gacatctggt atggtttcta tcgcagaact cttggagcag ttcctcttcc
     8821 cacgtaatac ccatggtacc ctgattgaaa agttgtctgg tggggagaag aagcgacttt
     8881 atttgcttaa gattctcttg caacggccca atgtcctctt actggatgaa ccgactaacg
     8941 atttggacat agcgactctg acagtcttgg aacatttctt gcagggcttt actggtccag
     9001 ttatcaccgt cagtcacgac cgttatttct tggacaaggt ggctaacaaa atcttggctt
     9061 ttgaagacga cggcattcag accttctttg gcaactacac agactatctg gatgagaagg
     9121 cctttctggc ttccagctct gccatttcct tggaaaaacc aaaggagaaa accgagaaaa
     9181 tcaaagaaaa caagaagcgg atgtcctact ttgagaagca ggaatgggcg accatcgaag
     9241 aggatattgc tggctgggag gagcggattg cgacaatcga ggcggaaatg ctgacctgtg
     9301 gtagtgattt tacaaaattg tccgatttgc agaaggaatt ggatgagaaa aacgacctgc
     9361 tcttggaaaa atatgagcgg tatgagtatc tgagcgaact ggagggctag atgaaagttc
     9421 ttgtcatgtc atatatggtc atctatctct tggtgacctt gggagccgct ttgtttagct
     9481 attttaagac taaaaagatg aacgctttac gcttgatttt aactatccta tccatgatat
     9541 tgctggcaaa caccttgtat ttttatagtc agtcttatca cgacttgcag atggtggggt
     9601 ttgctctagg ttttaccttt atttctactc tttttctcta taatggaacg aaagaaggta
     9661 gtaattttac gacagttatg ctcttttcca ttggaaggtt tatcttacat attcaatttt
     9721 taattttgct ctatctattt cgttagggca aattttttat ccgttcaaat ttttgaaaag
     9781 gctttacgca aacctttgca ttatgttata ataaaaaaaa tacatttgag gtgatgatta
     9841 tgtctaaaaa aattatcgga attgaccttg ggggaacttc tgttaaattg gccattttga
     9901 ctactgaggg agaaattcaa gaaaaatggt ctatcaagac aaatatttta gatgatggaa
     9961 gtcatattgt tccagatatt atcgagagca ttcaacatcg ttttgaaacc catggtttga
    10021 caaaagatga ctttttgggt gttggtatgg ggtctcccgg tgtagtggat agtgaagctg
    10081 gcactgttat cggagcctat aacctcaact ggaagacctt gcaattggtt aaagatcagt
    10141 ttgaatctgc gctcggttta ccattcttta tcgacaatga tgccaacgta gcagctcttg
    10201 gtgagcagtg ggttggtgct ggaaacaaca atccaaacgt tgtctttatg acgcttggta
    10261 caggtgtcgg tgggggtgtc atcgctgctg gaaacttgat tcgtggtgtc aaaggcgctg
    10321 gtggcgaatt gggccatatc acagttgatt ttaatgagcc atttgcatgt acttgtggta
    10381 agaaaggttg tctagaaaca gttgcttcag cgacaggtat tgtcaacctc agccgtcgct
    10441 atgctgatca atacgcaggc gatgctaaac tgaaacaaat gattgatgat gggcaaaatg
    10501 taacggctaa agatgtcttt gatttggcaa aagaaggcga taatttggct ttgattgtct
    10561 accgtcactt ctcagaatac ctaggtgttg cttgtgcaaa cattgctgca gtcctcaatc
    10621 ctgcctacat cgttctgggt ggcggtgtat cagctgcagg agagttctta ttggatggcg
    10681 ttcgcaaggt ctttgctgaa aatagcttcc cacaaatcaa ggaaagtaca caaattgtct
    10741 tggcaacacg tggtaatgat gcaggtgtat tgggcgcagc atcacttgtc ttgaaataat
    10801 aactgaggca ggggaaactc tgcttttttt ctaatccgct gtcacacttt ctttatatac
    10861 atatattgaa agtcagttga taaaagggta caataatagt gaaagagaaa ggagtgttgg
    10921 tgtatgaaac aagtaagtat gcctaaacta attgactatc taactatagt cgggcttttg
    10981 attttactgt ctgccttttt ccttgattac tggattcgtg actggttttt cccgtctagc
    11041 tggggaaacg tagcgaccat gttgattctt cctatactag ggactctaat tcttatacta
    11101 tctatctatt ataaaaaatt gtggactggt ttgattagta tcttcttaat gatctcattt
    11161 cctctgatat tcggtattgg ctactttata tttggcccct agaaggagtg gttatgaacc
    11221 tgactttact aaaaagatta aatctagttt tgtatggtat cgtaattttt ctcttcgtca
    11281 tgctattttt gccaataggg caatggtttg atattgtaaa tgtgaatttt aaactaacat
    11341 ttttcatcat tccatttttc ggactagcca gcttaccaac ggctatttac actaaaaatg
    11401 ttcgtcagat attgttgagt gttctcttgg ttaccttgta ttttatattg ttcagcctaa
    11461 taactgccct atctggtttg ttccacctta atttttattc ttt
//
LOCUS       DASFQD010000076        11441 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.077, whole genome shotgun sequence.
ACCESSION   DASFQD010000076 DASFQD010000000
VERSION     DASFQD010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11441
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.077"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            78..1259
                     /locus_tag="U1021_001531"
     CDS             78..1259
                     /locus_tag="U1021_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEM4712055.1"
                     /translation="MVFSVRTFNNINQIGLKELGNKFQIDGDHAANPDAFIIRSENLH
                     GFDFPENLKAIARAGAGTNNIPIEEATEKGIVVFNTPGANANAVKEAVIASILLSARD
                     YIGATAWANTLSGDDVPKQVEAGKKQFAGTEISGKTLGVIGLGAIGARIANDARRLGM
                     NVLGYDPYVSVETAWTISSHVKRVDDLKEIFTNADYITVHVPLTDKTRGLFNADSFGQ
                     MRKGTTLINFARGELVDNADLFEAIEAGVIKNYITDFGTEEVLNKDNIIVFPHVGGST
                     EEAELNCAIAAGQTIRRFMETGEIINSVNFPNVKQFLDAPYRITLINKNIPNMVATIT
                     TAVSELGINIDNIINKSKGDYAYTLLDLDEADKVKIEQLVAKFEATDAIVKVRVIQNK
                     N"
     gene            1262..1768
                     /locus_tag="U1021_001532"
     CDS             1262..1768
                     /locus_tag="U1021_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEM4712056.1"
                     /translation="MLYKQVYHSPLGPMSLIASDKGLRGAWFEGQKYFERGLNEKAIL
                     ASHPILDQTVRLLDQYFSGVQVDFSNLPLEAVGTNFQEHVWQLLKMIPIGQTTTYGQL
                     AQQLGLRSGQAVGGAVGRNPYSIIVPCHRVLNQKGQLTGYAGGLDKKIWLLRHENPEF
                     EVKDDFIL"
     gene            1752..2105
                     /locus_tag="U1021_001533"
     CDS             1752..2105
                     /locus_tag="U1021_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase family protein"
                     /protein_id="HEM4712057.1"
                     /translation="MILFYEYPKCSTCRAAKAELKSLGLEFEAIDIKSTPPSAEELKA
                     WMEATGLELKKYFNTSGNSYRELGLKDKFDSLSLEQALNLLANDGMLIKRPLLIQDGK
                     ILQIGYRTKYENLGL"
     gene            complement(2122..3021)
                     /locus_tag="U1021_001534"
     CDS             complement(2122..3021)
                     /locus_tag="U1021_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEM4712058.1"
                     /translation="MDHKIIERKSLTVSSVMNGLSGLAGIAVYIMTDLNALLLDGAFS
                     LIAFISSLVAVYISKNSHRKTETFPQGLYFLEPLYAIMKSLATLLLLVFAVLETSATA
                     FAYFVHGIGHQMTTGPVLPYTITMFFVCMGLYLYNRHMSTKVNHLSTIILAEAKGNLV
                     DGLISGAIGIAILLLYLVPINSWFGFLHYTGDFFLTLALAIISFKEPWNLLVASFKEL
                     ANGTIHFPEIHDSIYQLLEPYLKEDSNDVEIHIFKQGMKIRVKINLHNIHHEIIQKLL
                     EDKPQMLYLLKKHHEYISIEYAL"
     gene            complement(3321..4148)
                     /gene="xth"
                     /locus_tag="U1021_001535"
     CDS             complement(3321..4148)
                     /gene="xth"
                     /locus_tag="U1021_001535"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEM4712059.1"
                     /translation="MKLISWNIDSLNAALTAESPRALLSRAVIDTLVTEDADIIAIQE
                     TKLSDKGPTKKHLEILESYFPGYANTWRSSVEPARKGYAGTLFLYKNHLSPTITFPEI
                     GAPTTMDSEGRIITLEFDDFYVTQVYTPNAGDGLKRLADRQIWDVQYADYLAKLDSHK
                     PVLATGDYNVAHKEIDLANPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLN
                     AYTWWAQRSRTSKINNTGWRIDYWLVSDRIADKVSKSDMIDSGARQDHTPIVMEISF"
     gene            4304..5965
                     /locus_tag="U1021_001536"
     CDS             4304..5965
                     /locus_tag="U1021_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712060.1"
                     /translation="MKRKLFVFAWLALVLEMLIYYWYQLPALNILSVDFWIFFLQSVG
                     LVWLILSMFSSKGAFQKVTKISGRQRQVDTYQIKTSQLPAYLKWLGRIWVLVVLGLLG
                     LGLINSRVFRAKDYAAVISVKDADFKADFPETDISKLALLDRASAEKIGDTYLGTIDK
                     VSQFGISDDYRQITIGQQPFRVSPLEYKNFWKWLSNHQDGIGYYVKVNQTTGKAELAK
                     LSKAMHYSDSEFLLNDTLRHLRLQYPTTIFGKPSFEVDDQGNPYYIATIYEPKFGLSS
                     NDPIGAIVLDAVTGESKKYSLEDIPEWVDRVYSANNVISRVDDHYTYQNGFWNTIFSQ
                     TGVKNTTDSYNYISIGSDIYLYTGITSATADSSNLGFILVNMRTREITNYKLASATET
                     AAQESAEGEVQEKGYKATAPSLVKLADTAYYLVSLKDDAGLVKSYALVDAEDYQQVTV
                     NNDIALLISQVTGTDASSLSGLTVTENGEVGEQTEVISGKVEALASQIIGGATIYYIE
                     SEGKIYKVKATEDSTDRLPFIKVGDHFSGQLDKKNYLKNFKVNPE"
     gene            6125..7513
                     /locus_tag="U1021_001537"
     CDS             6125..7513
                     /locus_tag="U1021_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEM4712061.1"
                     /translation="MSLFRKKQAVGRHSQMRRHLGLVDLIFLGIGSMVGTGIFTVTGL
                     AAAQYAGPALIISIVIAAISVGLTALFYAEFASRIPTNGGAYGYLYSVFGEFPAWIAG
                     WLTIMEFLTAVSSVASGWGAYLKGLLANFGIAMPTALNGTFNPAAGTYVDLLPVLVLI
                     FVVGVVLLNSKAALRFNSALVVLKFSALALFILVGLFFIKPENWSNFSPFGFGAIYGG
                     QAGIMAGASLMFFAFLGFESISLAIDEVKKPEKNVPKGIVLSLSIVTILYIVVTLVLT
                     GMVHYTKLNVADAVAFALREVGLDWAASYISIVAILTLITVCISMTYALSRMVYSISR
                     DGLLPKSLSRLTQTSKVPKNATILVGIFAAICAGIFPLASIASFLNICTLAYLIMLAL
                     GIIRLRQVEGLPKDGQFKTPLVPLLPILSIIICLSFMFQYSLDTWLAFGVSVVIGILI
                     YFCYGYRHSEAK"
     gene            7636..8517
                     /locus_tag="U1021_001538"
     CDS             7636..8517
                     /locus_tag="U1021_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF975 family protein"
                     /protein_id="HEM4712062.1"
                     /translation="MSNSDIRAKATVIREQTDGMITLFLAPVLISFLSGVAEFGLKQI
                     WGQTGTFSWGTTIVKDGVTWTHNFISVGPSIIFDFIAQCLIVTACFQLIRLVRKQRTK
                     VNFTECFTLLDGKNFLPVFSTTLLKMLVLYLASFPAALGMILIGLAFYSTIVIFGAPI
                     DYQPDFSAFFSSSYFQTGLILVCVGITCSLFVGYGLSQVSFLLYDYLENNTYSSPFKL
                     FSQSWQLMKGNKWRRFLLDLSFIGWFIGVLLTFGFLGLYVYPYYWTCQTIFYEDLKAK
                     NPLMFSTYKSVISSTVA"
     gene            8710..9546
                     /locus_tag="U1021_001539"
     CDS             8710..9546
                     /locus_tag="U1021_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF975 family protein"
                     /protein_id="HEM4712063.1"
                     /translation="MMTSDIVSRAMMTRERTRGTTLLFLPSILLSIVYAVPVTIFRLL
                     TFLELRQNSAVVEGRLVSSIRLTYLGELGFALLLQLFIGLSCFHLLELLRGDRQEFSL
                     KDSFSFLKTEWKKPICTTFLYYYLLLFMAGLPANLGAALFIKGFAMSSLMVLSPGAMA
                     ELAVHQPSQLMKIGAPIFLLGMIIYLFVYYTYSQVVFVLYDHLDNASYTGPLAVFRES
                     RFLMKGNYWQRIWLDLSFLGWFIGEVFTLHLLSFFVTPYYHLSRTIFYEKLKKQRLSA
                     VE"
     gene            complement(9564..10439)
                     /locus_tag="U1021_001540"
     CDS             complement(9564..10439)
                     /locus_tag="U1021_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4712064.1"
                     /translation="MKTEFINEKAQSAFNLNIITSPIVAIILLLVGDSLGAVIFTPIS
                     FLLPFSETLSVSFELFAFAFISLMVILWARYIEKSPWVGLGFTKKGAGKDFLLGWGIG
                     AAMLTTCTLIMWGLGAIEFTSIQFSTKLVGEFIILILAWSIQGTTEEILTRGWMFSSL
                     SAKHNIPIGIIVSSLFFTFLHLGNNAISLIPILDLTLFAVLACLIMLKTGNIWVIGGL
                     HAAWNCFQGNVFAFPVSGTDAGQAFVQIGITGPEWLSGGKFGVEGSIISLLVQGIMIS
                     WLVYDLYFKPKTSSL"
     gene            10562..11173
                     /locus_tag="U1021_001541"
     CDS             10562..11173
                     /locus_tag="U1021_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3885 domain-containing protein"
                     /protein_id="HEM4712065.1"
                     /translation="MELNQWLKSFQLKDNRLVGPFFYGTLLALRFEIGPADEAEELSR
                     AIYLERAYARAVELFEQASSEYDYVLLSLLRQEDRDIDTYLWHFSSKFNFDKVPEPEL
                     IEVEDWTGDVLVFECYLFPVTDQDLKALLREIVKADHGGFHYLSASVIFLSSKDKALY
                     HCYDDRGVDIAVVDDDKRLELFTDCHDLLLDYDMEEMERRVRG"
BASE COUNT         3289 a         2023 c         2556 g         3573 t
ORIGIN      
        1 tagaaataaa gacttgttga cgaactcttc taggagtggt tgagttcttt cccactcccc
       61 tttttaggta aaaataaatg gtatttagcg tacgtacttt taacaatatc aatcaaattg
      121 gtcttaagga attaggcaat aaattccaga ttgacggaga tcatgcagca aatccagatg
      181 cctttattat tcgatctgaa aatttgcatg gatttgattt tcctgaaaat ctaaaagcta
      241 ttgcccgtgc tggtgcaggg actaacaata ttccaatcga agaggcaaca gagaaaggta
      301 ttgttgtctt taacactcca ggtgccaatg ccaatgccgt aaaagaggca gtcattgctt
      361 ccattctttt gtcagcacgt gactatatcg gagcgactgc atgggcaaat acattgtcag
      421 gagatgatgt acctaagcag gttgaagcag gtaagaagca gtttgctggg acagaaattt
      481 caggtaagac tcttggtgtt atcggacttg gtgctatcgg tgcgcgtatt gccaacgatg
      541 cccgccgttt ggggatgaat gttctcggtt acgaccctta tgtatcagta gaaactgcat
      601 ggaccatttc aagccatgtc aaacgtgtgg atgacttgaa agaaatcttt accaatgcgg
      661 attacattac tgttcatgtt cctttgacag ataagacacg aggactcttc aatgcggata
      721 gctttggtca aatgagaaaa ggaacaacct tgataaactt tgcccgaggt gaattggttg
      781 ataatgctga tttgtttgaa gcaattgagg caggagttat caagaactat atcacggatt
      841 ttgggacaga agaagtgctc aacaaggaca acattatcgt cttcccgcac gttggtgggt
      901 caacagagga agcagagctc aactgtgcca ttgctgctgg tcagaccatt cgtcgtttta
      961 tggagacggg tgaaattatc aactcagtta acttcccaaa tgtgaaacaa ttcctagatg
     1021 caccgtatcg tattaccttg attaataaga atattcctaa tatggtggca acgatcacaa
     1081 cggctgtatc tgagttggga atcaatatcg ataatatcat caataagtct aaaggtgact
     1141 atgcctatac tttacttgat ttggatgaag cggataaagt gaaaattgag cagttggttg
     1201 ctaaatttga agcaacggat gcaattgtca aagtgcgtgt cattcagaat aaaaactaat
     1261 catgctgtat aaacaagtct atcacagtcc acttggcccc atgtcattaa ttgctagtga
     1321 taagggattg agaggggcct ggtttgaggg acaaaaatat tttgaacgag gcttgaatga
     1381 gaaagctatt ttagcctccc atcccatttt agaccagaca gttcgattgc ttgaccagta
     1441 tttttcaggg gttcaggtgg acttttcaaa ccttccatta gaagctgtgg gaacaaattt
     1501 ccaagagcat gtctggcaat tattgaagat gattccgatt ggtcagacga ctacctatgg
     1561 acaactggct cagcaactgg gccttcgttc tggtcaggca gtaggaggag cagttgggcg
     1621 taatccttat tcgattattg ttccttgtca ccgagttctc aatcagaaag gacagttgac
     1681 aggttatgca ggtggactgg ataagaaaat ctggctcttg cgacatgaga atccagaatt
     1741 tgaggtgaaa gatgatttta ttttatgagt atccaaaatg ttcgacttgc cgagcagcaa
     1801 aggcggagct gaagagtttg ggattggaat ttgaagctat tgacattaag tcaacaccgc
     1861 ctagtgctga agagctaaaa gcttggatgg aggcgacagg actagaattg aaaaagtatt
     1921 ttaatacttc tgggaatagc tatcgtgaac taggtttgaa agataagttt gatagtctta
     1981 gcttggagca ggcacttaat cttctagcta atgatggtat gctgattaag cgtcccctac
     2041 taattcagga tggtaaaatc ttacagattg gctatcgaac aaaatacgaa aatctcggtt
     2101 tataagccga gattttgttt attatagcgc atattctatt gaaatatatt catgatgttt
     2161 tttcaaaaga tagagcatct gaggcttatc ttctaagagt ttttggataa tttcgtgatg
     2221 gatattgtgg agattgattt taacgcgaat cttcatgcct tgtttgaaaa tatggatttc
     2281 gacatcattg ctatcttcct ttaagtaagg ctccaatagc tgatagatag aatcatgtat
     2341 ctcagggaaa tggattgttc cgttggcaag ttccttgaaa gatgccacta ataagttcca
     2401 aggttcctta aatgaaatga ttgctagtgc tagtgtcaaa aagaagtcac cagtataatg
     2461 caggaagccg aaccaagagt tgataggaac aagatagagc agaagaattg caattccaat
     2521 tgcacctgaa atgagtccgt ctacaaggtt gccttttgct tctgctaata tgatagtaga
     2581 cagatgattg actttggtac tcatatggcg gttgtatagg taaagcccca tacagacaaa
     2641 aaacatggtt atggtataag ggagaacggg acctgtagtc atttgatgac cgattccatg
     2701 aacaaagtaa gcaaaggctg tcgcgctagt ttcaagtaca gcaaatacaa ggagtagtag
     2761 agttgcgaga gatttcatga tagcgtagag aggttctaga aaatacagtc cttgaggaaa
     2821 agtctcggtt ttccgatggc tattttttga tatgtaaact gcaactaagg acgaaataaa
     2881 tgctattaga gaaaaggctc cgtctaggag gagggcgttt aggtcagtca tgatataaac
     2941 ggcaatacct gctagtccag ataaaccgtt cataacagag gaaacagtta gagatttgcg
     3001 ttcgataatt ttgtggtcca taatccctcc ttttaatgta tatctatata tttattttac
     3061 cacaaaatga caccgttttc aaattgagcg gattaaaaca aggtagagag gtagagtgat
     3121 aagaaataaa ggctcaaaac ccttgcaata gacctacggg ttttaagcct ttaatatctg
     3181 ttatctgata attgaaatca ggttatactc ttcgaaaatc aaaatcagac gttgttgact
     3241 tgatttgatg aacttcagtt ctatctgcat ctgcgtcgcc tagtctgatt ttgattttca
     3301 ttgagtatta atatccactg ttagaatgaa atctccatca caattggtgt atggtcctga
     3361 cgagcaccgg agtcaatcat atctgactta cttactttgt cggcgatgcg gtcgctgaca
     3421 agccagtaat caattctcca gcctgtgttg ttgattttac tggtgcggct acgttgtgcc
     3481 caccaagtat aggcgttgag aacatcaccg tgcaagtggc ggaaggtatc tgtaaaacct
     3541 tttgctagaa gatttgtaaa accttgacgt tcttcatctg taaaccctgg agattgacgg
     3601 ttacttgcgg gattagcaag gtcaatttcc ttgtgagcaa cgttgtagtc acctgttgca
     3661 agaacaggtt tgtggctatc aagttttgct aagtagtcag catactgtac atcccagatt
     3721 tgacggtcag caagccgttt caagccatca ccagcatttg gcgtataaac ttgtgtgaca
     3781 tagaagtcat caaattctag cgtgatgata cgcccttcag aatccatggt tgttggagca
     3841 ccaatctcag ggaaggttat ggttggactt agatggtttt tgtagaggaa gagtgtacca
     3901 gcatagcctt tgcgagctgg ttctacagat gaacgccagg tattggcata tccagggaag
     3961 tagctttcca aaatttctag atgcttttta gtcggtccct tatctgacaa ttttgtttcc
     4021 tgaatggcga taatatcagc gtcttctgtc acaagtgtat cgatgactgc acgtgataat
     4081 agggcgcgag gagactctgc agtcaatgca gcgttaagag aatcaatatt ccaagaaatg
     4141 agtttcataa ttttcctttt ctagtctgtt actgttttac attataccaa aaataaaagt
     4201 tgcaggcgaa tatggaaact tgaaaaaaat tttataattc ttgtattata acattaaaat
     4261 tgtgatacaa tagaactaat aaatctgtgt caaggaggtt attatgaaaa gaaaattatt
     4321 tgtttttgcc tggttagccc tagttttgga aatgctaatc tactactggt accagttgcc
     4381 tgctttaaat attttgagtg tggacttctg gatatttttc cttcaatctg tcggattggt
     4441 ctggctcata ctttccatgt tcagctccaa aggtgctttt caaaaggtga ccaagatttc
     4501 cggtcgccag agacaagtag atacctatca gattaaaacc tcgcaactgc cagcttactt
     4561 aaaatggttg ggacgaattt gggtattggt tgtcctgggt ttgttggggc tggggcttat
     4621 caactcacgt gtatttcgtg ctaaggatta cgctgctgtc ataagcgtta aggatgcgga
     4681 ttttaaagca gattttcctg aaacagacat atccaaattg gccctcctag accgcgcctc
     4741 ggccgaaaaa atcggtgata cttatctagg taccattgac aaggtctccc agtttggcat
     4801 ttcggatgat tatcgccaga ttactatcgg tcagcaaccg ttccgtgtat cgcctttgga
     4861 atataagaat ttttggaaat ggctgagcaa ccatcaagat gggattggtt actacgtgaa
     4921 ggttaatcag acaacaggga aggcagaact tgccaagttg agcaaagcca tgcactattc
     4981 agattccgaa tttttgctga atgatacctt acgtcatctt cgcttgcaat acccgacaac
     5041 tatttttggg aaaccatcct tcgaagtgga tgaccaagga aatccatatt atattgcaac
     5101 gatttacgag ccaaaatttg gactttcatc aaatgatccg attggtgcta ttgtattgga
     5161 tgcagtaaca ggggaaagta agaagtatag tctggaagat attccagagt gggtagaccg
     5221 tgtttattcg gcaaacaatg ttatcagccg tgtagatgac cactatactt atcaaaatgg
     5281 tttctggaat accattttca gtcaaactgg tgtgaaaaat acaacagaca gctataatta
     5341 tatttctatc ggctcagata tttatctcta cacaggtatc acctcagcaa ctgctgattc
     5401 atccaacctt ggatttattc ttgtcaatat gagaactcgt gaaattacca actacaaatt
     5461 ggcttcggcg acggaaacag cagcgcaaga gtccgcagaa ggtgaagtgc aggaaaaagg
     5521 ctataaagcc actgctccaa gcctggttaa gttggcagat acagcctact atttagtatc
     5581 cttgaaagat gatgccggct tggttaaatc atacgctctt gttgatgccg aagattatca
     5641 acaggttact gttaacaacg atattgcgct cttaatttct caagtcacag gaacggatgc
     5701 ttctagcctt tcaggattga cggtgactga aaatggagaa gttggtgaac agactgaggt
     5761 tatcagtgga aaagtagaag ctttagcgag tcaaataatt ggcggtgcga caatctacta
     5821 tattgagtct gagggcaaga tttacaaagt caaagcaacg gaagatagta cagatcgatt
     5881 accatttatc aaagtaggag atcactttag cggtcagtta gataagaaaa attatcttaa
     5941 aaactttaag gttaatccag aataatcata agaaagagtg aggtagaaaa gccttgctct
     6001 tttgcttgtc gtcacccatg cgaaatattt caacttatgg tataatgggg cgttgtggtt
     6061 ctttgacagg aatccgtaga ttattctgtc gagtatccat attcttattc tgaaggagta
     6121 ttttgtgagt ttatttagaa aaaaacaagc agtcggtcgc catagtcaaa tgcgtcggca
     6181 tttaggctta gttgatttga tatttttagg tatcggttcg atggttggaa caggtatctt
     6241 tacggtaact ggtttggcag cagcccagta tgcagggcca gctctgatta tctcaattgt
     6301 tattgcagca atttcagtcg gactaacagc cttgttttac gcagaatttg cctcgcgtat
     6361 accgactaac ggtggtgcct atggttatct ctactcggtt tttggtgaat ttcctgcctg
     6421 gattgctggc tggctgacga tcatggaatt cttgactgct gtatcgagtg ttgcatctgg
     6481 ttggggagct tatttgaaag gactcctggc taattttggt atcgctatgc cgacagcttt
     6541 gaatggaact tttaaccccg ctgcaggtac ctatgtagac ctcttaccag ttctcgtctt
     6601 gatttttgtg gtaggagtgg tcttgcttaa ttctaaggca gcacttcgtt tcaattcagc
     6661 cttggtagtt ttgaaatttt cagcgttggc tttatttatt ttagtagggt tattctttat
     6721 caaaccagaa aactggtcga acttctctcc ttttggtttt ggtgccattt atggtggaca
     6781 ggcaggaatt atggcaggag cgtctctcat gttctttgcc ttcctgggat ttgagtctat
     6841 ttcattagca attgatgagg tgaaaaaacc tgagaagaat gtaccaaagg gaatcgtgtt
     6901 gtctctatcc attgtaacaa ttctttatat tgtagtgaca ttagtcttga ctggtatggt
     6961 tcactatact aagttgaatg tggcagatgc ggtagccttt gcacttcgag aagttggatt
     7021 ggattgggca gcgagttata tttctattgt tgcaatccta acattgatta cagtatgtat
     7081 ttcgatgacc tacgccttgt cgagaatggt ctattccatc agtcgtgatg gtttgctacc
     7141 gaaatcattg agccgattga cacaaacaag caaggttcct aaaaatgcga ccattcttgt
     7201 ggggattttt gcagccattt gtgcaggtat tttcccacta gcaagtattg cttccttcct
     7261 caatatctgt accttagctt atttgattat gctggcgttg ggtattattc gtctgcgtca
     7321 agtcgaaggt ttgccaaaag atggacaatt taaaacacct cttgttccct tgttacctat
     7381 cctctcgatt atcatttgtc tttcatttat gttccagtat agtttagata cttggttagc
     7441 attcggagta tccgtggtta ttggaatttt gatttacttc tgttatggct atcgtcattc
     7501 ggaagcaaaa taatagattt cccttcttta tttgaaggga ttttttgtac aattttttta
     7561 tagaaataat ggaaaactta aaaataaaat agtataatat atataatgat acaaatatat
     7621 gaaaggagaa acgcaatgtc taatagcgat attcgagcta aagcaacggt tattcgtgaa
     7681 caaacagatg ggatgataac cttgtttttg gcacctgttt tgatttcttt tctgtcagga
     7741 gtggcagaat ttggcttgaa acaaatctgg gggcaaactg gtactttctc ctgggggaca
     7801 actattgtga aagatggtgt tacttggacg cataatttta tttctgtggg cccgtcaatc
     7861 atatttgatt ttattgcaca atgtttaatt gtgacagctt gttttcaact aataagactg
     7921 gtgagaaagc aaagaaccaa ggttaacttt acggagtgtt tcactttact agatgggaag
     7981 aattttttac cagtttttag tacgacatta ttgaaaatgc tggtcttgta tttagcaagt
     8041 ttccctgctg ctcttggaat gatattgata ggtttagctt tctatagtac tattgtcatc
     8101 tttggtgctc ctattgatta tcagcctgat ttttcagctt ttttcagttc gtcttatttt
     8161 caaacaggat taatactggt atgtgtaggg attacttgta gtttattcgt aggatatggg
     8221 ctcagtcagg tctcttttct tctctatgat tatttggaaa acaataccta ttcttcacca
     8281 tttaaactct tcagtcagag ctggcagttg atgaagggga ataaatggcg ccgtttcctc
     8341 ttggatttat cttttatcgg ctggtttatt ggagttcttt tgacgtttgg gtttttggga
     8401 ctttacgtat atccatacta ttggacttgt cagactatat tttatgaaga tttgaaggcc
     8461 aagaatccat tgatgttttc aacatataaa tcagttatct cttccacagt agcctaggga
     8521 gtatggagat aacaaattat taggaatccc ttcgtatttt ggagggattt tcctgttttt
     8581 aagagatgtt ctggaaaatt aatggataaa gttttatact aatagtagga tggtaaagta
     8641 gtccgatgtt gatggaatat ttgcgacgtg acttcataaa taaggagaga aaattggagg
     8701 ggaattgtga tgatgacgag tgatatagta tcaagagcga tgatgactcg cgagcggaca
     8761 agaggtacaa cactactatt tttgccctcc attttgctat ctattgttta tgctgtacca
     8821 gtaacaattt ttcgcctact aacatttcta gagctccgtc aaaacagtgc tgttgtggaa
     8881 gggcgattgg tttcttcaat caggttgact tatttaggtg agttaggctt cgctctgctg
     8941 ttacagctgt tcatcggtct gtcctgtttt catttattgg aattgttgag aggggataga
     9001 caggagtttt ctttaaaaga tagtttttcc tttctaaaga cagaatggaa gaagcctatc
     9061 tgtaccactt ttctttatta ttatttgctt ctttttatgg ctggacttcc agctaatcta
     9121 ggggctgctt tatttattaa aggcttcgca atgagtagtt tgatggtctt atctccggga
     9181 gcaatggcag agctggcagt tcatcagcct agtcaattaa tgaagatagg ggctccgatt
     9241 ttcctgctag gaatgattat ttaccttttt gtctactata cctactcaca ggttgttttt
     9301 gtcttgtatg accatttgga taatgctagt tatactggtc ccctggctgt atttagggaa
     9361 agtcgtttct tgatgaaagg gaactattgg caacgtattt ggttagattt atccttttta
     9421 ggatggttta tcggggaagt atttaccctt catctgttat ctttttttgt gactccttac
     9481 tatcatttat ccaggaccat tttctacgaa aaattgaaaa aacaaagact gtcagctgta
     9541 gagtagctaa cagtctttta tggttatagg gagcttgttt tgggcttgaa atagagatcg
     9601 taaaccaacc aggaaatcat tattccttgg acaagcaagc tgatgatgga gccctctacg
     9661 ccaaactttc caccagatag ccactcagga ccagtgatac cgatttgaac aaaggcctga
     9721 ccagcatcgg tgccgctgac tgggaaagca aaaacattcc cttggaaaca gttccacgca
     9781 gcgtgtaatc caccaatcac ccaaatgttg cctgttttga gcataatgag gcaggcaaga
     9841 acggcaaata gggttaaatc caaaattgga atgagtgaaa tagcattgtt tccgaggtgg
     9901 agaaatgtga agaagaggga agaaacaatg ataccgatag gaatattgtg tttagctgaa
     9961 agtgatgaga acatccatcc tcttgttaga atttcttctg tcgtaccttg gatagaccag
    10021 gcaaggataa ggataataaa ttctccgact aattttgtag agaactggat gcttgtaaat
    10081 tcaatcgcgc ctaatcccca catgatgagt gtacaagtgg tcagcattgc agctccgatt
    10141 ccccacccga gtagaaaatc ttttcccgca ccttttttag taaaaccaag tcctacccac
    10201 gggctttttt caatataccg tgcccataaa atgaccatca ggctgataaa agcgaaagcg
    10261 aatagttcaa aacttacaga aagggtctcg ctaaatggga gtaaaaagct tattggagtg
    10321 aaaataactg ctcctagtga atctcctact agcaacaaaa taatagctac aataggagag
    10381 gtgatgatgt tgagattgaa agctgattga gccttctcat tgataaattc ggttttcata
    10441 ggacctcctt ttactagata ctttactagt tcactattct atcatatttt tccaaagaag
    10501 actagaccta atttcctagt atatggtaga atagtacaaa gctatataag gagaatagta
    10561 tatggaattg aatcaatggc tgaagtcctt tcaactgaaa gataatcgac tagtgggccc
    10621 attcttttat ggcacacttc ttgctcttag atttgaaatc gggcctgcag acgaagcaga
    10681 agaattatca agagcaatct atcttgaaag agcctatgca cgtgcagtag aactttttga
    10741 gcaggctagt tcagaatacg actatgtgct cctttcgctc cttcgacagg aagataggga
    10801 tatagacacc tacctctggc atttttcatc gaaatttaac ttcgacaagg tccctgagcc
    10861 tgagttgata gaagtggagg attggacggg agatgtgcta gtctttgagt gctatctctt
    10921 tccagttacc gaccaggacc tgaaggcttt gttgagggag attgtcaaag ccgaccatgg
    10981 aggttttcac tacctttctg cttcagttat ctttctatct agcaaggaca aggctctgta
    11041 tcattgctat gacgataggg gagtggatat cgcggtggta gatgatgaca aacgtttgga
    11101 gctctttaca gactgccatg acctcctttt ggactatgat atggaggaga tggagagaag
    11161 ggtgaggggg taggaaacca ctgctaaagg tgatatacca tctcttagat aaaagtactt
    11221 cacaagtgaa tacaggttca aaaaaattca cagtaaaacc tgtggaaaat atggtagaat
    11281 agaacagtag aaaagttcca aaagtggggc ggaaatctat tttgggaggt ggcaacttca
    11341 tttttgatgg aaagtaaaac tttctcatca aaaaacgagg ctgggcaaaa agtccaaagc
    11401 cacttctcag agttcgtgtc aacatctcag cgcagtggtt g
//
LOCUS       DASFQD010000077        11237 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.078, whole genome shotgun sequence.
ACCESSION   DASFQD010000077 DASFQD010000000
VERSION     DASFQD010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11237
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.078"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            35..883
                     /locus_tag="U1021_001542"
     CDS             35..883
                     /locus_tag="U1021_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEM4712066.1"
                     /translation="MNDFITKYLSQFNIEAIVTAGLNKVLSLVLLFVAFYIIKKIAKA
                     SVKKVLVPSLKVSTQDIGRQKTISRLVESILNYLLYFILIYCILSILGLPVSSLLAGA
                     GIAGVAVGLGAQGFLSDLVNGFFILIERQFDVGDVVKLTNGPITISGTIVSMGIRTTQ
                     VRDADGTLHFIPNRNILVVSNQSRGDMRAQIDIPLKFNTDLEQVYRVIEEVNLREISN
                     FDQITGVTVLGPQNAISGQFVFRVNLFVANGQQNKIYHQFFGFYQDALRQAGIDLPSS
                     GPTVLK"
     gene            894..1481
                     /locus_tag="U1021_001543"
     CDS             894..1481
                     /locus_tag="U1021_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4352 domain-containing protein"
                     /protein_id="HEM4712067.1"
                     /translation="MQTKDFVVENGQMYYKKKPLHKQPLFWTTIAGAILSFILGVTCF
                     IFMVGLSAANFDNWDTGSDGYIDETVEYTEYQVGDSVDFSDGLHVTVTSMGKDDSIEL
                     VDSYYSTAYVVEMEVENSTAKELYFDEYYFSLMDPVSQIPFTLDLRTYDVNLVEKLKP
                     GEKVQVKLIYGIDNETNFGFTYEDAMWTELVAEGI"
     gene            complement(1705..3051)
                     /gene="gdhA"
                     /locus_tag="U1021_001544"
     CDS             complement(1705..3051)
                     /gene="gdhA"
                     /locus_tag="U1021_001544"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011999806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HEM4712068.1"
                     /translation="MSNAKAYIQASFEAVKARNPHETEFLQAVEELFSTLEPVFEAHP
                     EYIEENILARIVEPERIISFRVPWTDKDGNVQVNRGYRVQFNSAVGPYKGGLRFHPTV
                     NQSILKFLGFEQIFKNVLTGLPIGGGKGGSDFDPKGKTDAEIMRFCQSFMTELQKHIG
                     PSLDVPAGDIGVGGREIGYMYGQYKRLRQFDAGVLTGKPLGFGGSLIRPEATGYGLVY
                     FTDNMLAANGKSFKDQTVLISGSGNVAQYAVQKATELGAKVISVSDSNGYIIDETGID
                     FDLLVDIKEKRRARLTEYAAEKATAKYFEGSVWNYDGKADIALPCATQNEINGEQAAA
                     LVKNGVYCVAEGANMPSDLDAIKVYKENGVLYGLAKAANAGGVAVSALEMSQNSLRLS
                     WTRDEVDGRLKDIMANIFNTAKETAEKYDLGTDYLAGANIAAFEQIADSMIAQGLV"
     gene            3283..5922
                     /locus_tag="U1021_001545"
     CDS             3283..5922
                     /locus_tag="U1021_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4712069.1"
                     /translation="MKKKSVAIPVTLATGVLAVGTVGFQANQVSADTIVPTVSEEQAA
                     PVKVVSEQELASAQAAVTEAEQVAQAASNTATAKEQVAANAVQGVVEATDNLAKAEEL
                     VAKATEAEIEKTQTTIEELKETAASQETAQTLAEKELAEAKKAEKVPAEKVAQAQTAY
                     EKANSTLIAAQATATAATNQVAEAQAALATAEANVATTTNQVATAEQAVQAAQTALQT
                     AEQADKETAQQLAVAKENLAQAKQAQAVAEADLATKVAAVTTAESSVKEAQAAVAAAE
                     AYLASLVSDGTELTPLEFFGAEVEEPSEGNAMVGVSGTFYEPDQAAILARINEIRKEA
                     FDEGLVDRYVPLKWSTILEYTTQIRAAEAEYTLGHIRWTDKSIFTVDTDNPEIVAVRA
                     ENLAWNFGRSGEAMLTAIEQFYAEKEDFVNQTPDAVVGHYVSLINPNYTHTALSAFLS
                     AGNDGWTGVAQHFTVGDTSEEAVGLYGDAVQILEAKEDYLFDYELLTPEIVSDVNQNI
                     VLNVSAVFAPYDDYARVVSVYSGLTWESADENIAVVSETGVLTGISEGETSVYVTFPN
                     GKKETVKVKIVDIQKARDAVEQAKANLAKQEAELAKAKTARQAAQTSVENAKATVANR
                     QTTYNQLLSVESKVTKAQAELDKAQATLTDAKEKAAAAKQDLTTAEQTLADKEQAASV
                     AKQDLSVAQTAQTTAKNALSEAQASLSALQEITATKEAALKLAEANLAKTVADLKAAE
                     AYLASLLNAQENYRLAQQLLEEAKVAAAEALAQRDAALEAKQAAQTDFETALAKYKSM
                     RLAYEAQLALQKAAETKELKQAPVATPKPLSKPEVSQTSSKVTATQTKTLPATGSVES
                     MLGLTGLALLGTLALANQRRRRN"
     gene            6120..7058
                     /locus_tag="U1021_001546"
     CDS             6120..7058
                     /locus_tag="U1021_001546"
                     /EC_number="1.3.98.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011999807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate oxidase"
                     /protein_id="HEM4712070.1"
                     /translation="MVSTATTLGGFTFDNCLMNAAGVWCMTKEELDAVKNSKAGTFVT
                     KTATLDYRAGNPEPRYQNVPLGSINSMGLPNQGLAYYLDYLLELQETEPEHTFVLSLV
                     GMSPDETHEILRTVEASDFKGLIELNLSCPNVPGKPQIAYDFETTETILQEVFTYFTK
                     PLGIKLPPYFDIVHFDQAAAIFNQFPLKFVNCVNSIGNGLYIKDESVVIKPKNGFGGI
                     GGEYIKPTALANVHAFYQRLKPEIQIVGTGGVLTGRDAFEHILCGASMVQVGTTLQKE
                     GVAAFERITAELQAIMAEKGYETIEDFRGKLQHLDD"
     gene            7391..8623
                     /locus_tag="U1021_001547"
     CDS             7391..8623
                     /locus_tag="U1021_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEM4712071.1"
                     /translation="MEKRANYIRRKRYASYRTKMHLFFICGLATIILAIIIVSEHLVP
                     RLNQASESMHSDNSVRIMAHGDLLYHLPILRGAEQPDGSYDFSENFTYVKPWIEQADF
                     AIADFEGTISPDVELAGYPLFNAPAIVANNIHDAGYDLVDLAHNHILDSHLSGLVSTV
                     NTFRDAGVDTVGVYAEGNRATAPLYIREVNGIRIAVLAYAYGFNGMEALLSQEEYDAY
                     LSDFDKEKMRAEIERAEKEADITIVMPQTGVEYQLEPTEEQTSLYHQMIDWGADIVLG
                     GHPHVVEPAEIIEKDGQRKLIIYSMGNFLSNQRIESMDDTPNSQWTERGVLMDVTIQK
                     VNGETTIQMARAHPSWVNRVWKGTYSPEGYELYGYQTYILEDWIAGGPYYGQLDAATQ
                     ARIEEAYQEMNAFVGLEW"
     gene            complement(8840..9688)
                     /locus_tag="U1021_001548"
     CDS             complement(8840..9688)
                     /locus_tag="U1021_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016182753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4712072.1"
                     /translation="MKLHLGKTLRKVRQGKQISLCSLADEHLSKSQISRFERGESEIS
                     CVRLINILDKLNISLDEFLILHDSDYTNTESFAKLMQYIRKQYSSQNIDNIASLLSNS
                     SKYNLNPYVRTMVKSILHTLDSNIVPSDEELLQLTDYLFKIENWGYYEIILLGNCVRT
                     INYDSYFLLTKEMLHNYIYSSLNKTNKQIVTQLAINCFILSIDMEKFSNCSYLISEIK
                     KLLDNELNFYEQTVFLYATGYFEFKRSGKGIEKMKQAIQVLDLLGEDKLKLHYTSHFD
                     KLVNKK"
     gene            9770..9841
                     /locus_tag="U1021_001549"
     CDS             9770..9841
                     /locus_tag="U1021_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_128650800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SHP2/SHP3 family peptide pheromone"
                     /protein_id="HEM4712073.1"
                     /translation="MKKISKLIPILVLIMDIIIIVGG"
     gene            10286..11083
                     /locus_tag="U1021_001550"
     CDS             10286..11083
                     /locus_tag="U1021_001550"
                     /inference="COORDINATES: protein motif:HMM:NF024919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEM4712074.1"
                     /translation="MVKVSLIKNDKLSNVQNITGFAPVIGYEPWALRTIESVKQSLVD
                     GQPILIRIHSALSYPTDSDRNTAKLDMESHAVLIIGYDDFKQEFDILDPWRVDWNGSK
                     GGLSTIKYEALPIVCVNATAEKSTRCSLIQKKVAVYTDKFYNTSVSIDFGFYVPKGYI
                     IDQKQSKFTEFDVTASYTLNGSVFTYHNIIRGEWWVGQTAKMEIPIGKDISEEVDVHF
                     AVSSKLVGDRPYHYEDIIKFEFNEMVDVTSSSQHKYKQEFDLNKVVV"
BASE COUNT         3451 a         1992 c         2499 g         3295 t
ORIGIN      
        1 gtttttttag gatgttttct gctataatta tctcatgaat gattttatta ccaagtattt
       61 gtctcaattt aatattgagg ccattgtgac agcgggtcta aataaggttt tatcgcttgt
      121 tttactcttt gttgcatttt acattatcaa gaagatagcc aaagcttctg tgaaaaaggt
      181 tttggttccc tctctaaagg tatctacaca agacattggt cgtcagaaga ccatcagtcg
      241 tctggtggaa agcatcttaa attacctact ctactttatc cttatctact gtattttgag
      301 tatcctcggt ttaccggtat ccagtcttct tgcaggagcc gggattgctg gggtagctgt
      361 tgggctgggc gcacaaggtt ttctctcaga cttggtcaat ggattcttta tcttaattga
      421 acgacagttt gacgtcggag atgtggttaa gttaaccaac gggcccatta ccatttcagg
      481 aaccatcgtt agcatgggaa tccgaacaac acaagtacgt gatgcagatg gcacattgca
      541 ttttattccc aatcgcaaca ttctagtggt atccaaccag tcaagagggg acatgcgtgc
      601 tcaaatcgat attccgctca aatttaatac cgatttggag caagtctatc gcgtaataga
      661 agaggtcaat ttgagagaaa tcagcaattt tgaccagatt acaggtgtga ctgtattagg
      721 tccccaaaac gctatttcgg gacagtttgt atttcgtgtt aatcttttcg tagccaacgg
      781 tcaacagaac aagatctatc atcaattctt tggtttttat caagatgctc tgcgtcaagc
      841 aggaatagat ttaccttcaa gtgggccaac tgttttaaaa taaggagttt attatgcaaa
      901 caaaagattt tgtcgttgaa aatgggcaga tgtattataa gaagaaaccc ttgcacaaac
      961 agcctctctt ttggacaacc attgctggtg ccattctctc cttcatccta ggagtaacct
     1021 gttttatttt tatggtcggt ctaagtgcag caaattttga taattgggat acaggtagtg
     1081 acggatacat tgatgagact gtggaataca cggagtatca agttggtgac tcagttgatt
     1141 tttctgatgg tcttcatgta acagtaacat ctatgggcaa agacgatagc atagaactag
     1201 tggatagcta ctacagcaca gcttatgttg ttgaaatgga agttgaaaat tcgaccgcaa
     1261 aagagctcta ttttgatgaa tactatttca gtctcatgga tcccgttagt cagattccct
     1321 ttaccctgga tttgcggacc tatgatgtga atctagttga aaagctgaag ccaggagaga
     1381 aagtacaagt aaaacttatc tacggtatag ataatgaaac aaactttggt tttacctacg
     1441 aagatgccat gtggacggaa ttagtcgcag aaggtatcta attgctgtag aaaaagtttt
     1501 aaatattgca caattttgcg ggtttatacg ccccttggtt cagattgttc gagttggtaa
     1561 tcgacttatc tattattttt acattttaaa aaggagaaca tgtttatcca ctgttctcct
     1621 cttcttttaa tgaaaaatac ccccaaaatt agcacgtcaa ttttgggggc gtttttatta
     1681 tagtttagta aactaaaagt aagcttatac caaaccttgg gcaatcatgc tatccgcaat
     1741 ttgttcaaag gctgcgatgt tagcaccggc aaggtagtct gtaccaaggt cgtatttttc
     1801 agcagtttct ttggctgtgt tgaagatatt tgccatgatg tctttaagac ggccgtctac
     1861 ttcgtcacga gtccatgaaa gacgaaggct gttttggctc atttcaaggg cagatacggc
     1921 tacaccacca gcgttggcag cttttgcaag accgtaaaga acgccatttt ctttgtaaac
     1981 tttgatagca tccaggtcag atggcatgtt ggcaccttca gccacacagt aaacgccatt
     2041 tttcacaagg gcagcagctt gctcaccgtt gatttcgttt tgagtcgcac atggaagggc
     2101 aatgtcagcc ttgccgtcgt agttccatac agaaccttcg aagtacttag cagttgcttt
     2161 ttctgcagcg tattctgtca aacgagcgcg gcgtttttct ttgatgtcca ccaagaggtc
     2221 gaagtcgata ccagtttcgt caatgatgta accatttgag tctgaaacag agatgacttt
     2281 tgcaccaagt tcagtcgctt tttgaacggc atattgggca acgttaccag aacctgagat
     2341 aaggacagtt tggtctttga aggatttacc gtttgctgcc aacatgttat cagtgaagta
     2401 aaccaaaccg taaccagttg cttctgggcg gatcaatgaa ccaccgaagc caagaggttt
     2461 accagttaag acacctgcat caaactggcg gaggcgtttg tattgaccgt acatgtaacc
     2521 aatctcacga ccaccgacac cgatgtcacc agcagggacg tcaagtgaag gtccgatgtg
     2581 tttttgcaat tcagtcatga agctttggca gaagcgcatg atttcagcat cagtttttcc
     2641 tttaggatca aagtctgaac cacctttacc accgccgatt ggaagaccag tcaagacgtt
     2701 tttgaagatt tgttcaaaac cgaggaactt caagatggat tggtttacag ttgggtggaa
     2761 gcgaagaccg cctttgtaag gacctacagc tgagttgaac tgaacacggt agccacggtt
     2821 gacttggaca tttccatctt tatctgtcca tggaacacgg aagctgatga tacgctcagg
     2881 ctcaacgata cgggccaaga tgttttcttc gatgtattct gggtgtgctt caaaaacagg
     2941 ctcaagtgta gagaagagct cttctacagc ttggaggaat tctgtttcat gtgggttgcg
     3001 ggctttgact gcttcaaaag aagcttggat gtaagctttg gcatttgaca tgggatcacc
     3061 tgatttcttt tttatttatt aaattgtctg acaatttaat ttatctgata attattatag
     3121 caccatgatt tttaaatgta aagaaaaaaa tgataatttt tctaaacttt ctgagcaagt
     3181 tgtgagtaga taaaaagtag actttcttta catacgaaca ttgacaaatg aggaatgata
     3241 gtataatata aaagttgtaa gtaaaatata ggggtaatat atatgaaaaa gaaatctgtt
     3301 gctattccag taacgcttgc tacaggtgtt ttagctgttg ggacagttgg ttttcaagca
     3361 aaccaagtca gtgccgatac tattgttcct actgtctcag aagaacaagc tgcaccagta
     3421 aaagttgtta gtgagcaaga gcttgcaagt gcacaggcag ctgtgacaga agctgagcaa
     3481 gttgcccaag ctgcttcaaa tactgctacg gctaaggaac aagttgctgc taacgctgtt
     3541 caaggcgttg tggaggcgac tgataatcta gcaaaagctg aagagcttgt agcgaaggct
     3601 actgaggcag aaatcgaaaa gactcagact actatagaag agttaaaaga aacagctgcc
     3661 agtcaagaaa cagctcaaac tcttgctgaa aaggaactgg ctgaggctaa gaaggctgaa
     3721 aaggttccag ctgagaaggt ggctcaagca caaacagcct atgaaaaagc taattctaca
     3781 ttaattgctg cacaagctac ggctactgca gcaactaacc aagttgccga agcccaagct
     3841 gctcttgcaa cagcagaggc aaatgtagcg acaactacca accaagttgc aactgccgag
     3901 caagcagttc aggcagccca aaccgctttg caaacggctg aacaagccga taaggaaacg
     3961 gctcaacaat tggcggtagc caaggagaac ttagctcaag ccaaacaagc ccaggccgtt
     4021 gctgaggctg atttggctac aaaagtagct gcggtgacta cggctgaatc aagtgttaaa
     4081 gaagcccaag cggcagttgc agcagcagaa gcatatctag ctagtttggt ttcagatgga
     4141 acagaattaa ctccgctaga attcttcgga gcagaggttg aagagccgtc tgaaggaaat
     4201 gctatggtgg gtgtgtcagg caccttctac gaacctgatc aagcagctat cttagctaga
     4261 attaatgaaa ttcgtaagga agcttttgat gaaggccttg tagatcgtta tgtacctctt
     4321 aagtggtcaa ctattttaga gtatacaact caaattcgtg ctgcagaggc agagtatacc
     4381 ttgggtcaca ttcgttggac agataagagc atctttactg tagacactga taatcctgaa
     4441 attgtagccg tacgtgctga gaatttggct tggaattttg gtcgatcagg cgaggcaatg
     4501 ttgactgcta ttgagcagtt ttatgcagaa aaagaagact ttgtgaatca gacgccggat
     4561 gcggtagtag gtcactatgt atcactaatc aatccgaatt acacccatac agccctatca
     4621 gctttcttgt cagctggcaa tgatggttgg acaggtgtgg cacaacactt tactgtaggg
     4681 gatacctcag aagaagcggt tggtttatac ggtgatgctg tacagatttt agaagccaaa
     4741 gaagattatt tatttgatta cgaattgctg acacctgaga tagtatcaga tgtcaatcag
     4801 aatatagtgc tgaatgtttc agcagttttt gccccttacg atgactatgc ccgtgtcgta
     4861 tctgtttatt caggactaac ttgggaatct gcagacgaga acattgctgt agtttcagaa
     4921 acaggcgtgc ttacaggtat ctcagaaggc gaaacaagcg tgtatgtaac cttcccaaat
     4981 ggcaagaaag aaacggtcaa agtcaaaata gttgatattc aaaaagcacg cgatgcagtt
     5041 gagcaagcta aagcgaattt agcgaagcag gaggccgaac ttgcgaaagc taagacagca
     5101 cgtcaagcgg cacagacaag tgtagagaat gcgaaagcta ccgttgcaaa tcgtcaaaca
     5161 acttataacc aattattatc tgttgagtct aaagtcacga aagctcaagc ggaacttgat
     5221 aaggctcaag ctactcttac ggatgcaaaa gaaaaagcag ccgctgcaaa acaagactta
     5281 actactgctg agcagacact tgctgataaa gaacaagcgg caagtgttgc aaaacaagat
     5341 ttatcagtcg ctcaaacagc acagacgact gcaaaaaatg ctttatcaga agcacaggca
     5401 agcctatccg ctttacagga aataactgca acgaaagaag cagctttgaa acttgcagag
     5461 gctaaccttg ccaaaacagt cgcagatttg aaagcagcag aagcttatct tgcaagctta
     5521 ctcaatgcac aagaaaacta tcgcctagct cagcagttgc ttgaggaagc gaaagtagcg
     5581 gcagcagaag ctcttgcgca acgtgatgca gctttggaag ccaaacaagc agcgcagaca
     5641 gattttgaaa ctgctctagc aaaatataag agcatgagac ttgcttatga agcacagtta
     5701 gctttgcaaa aagcggcgga aacgaaagaa ttgaagcagg ctcctgtagc gactcctaaa
     5761 ccattgtcaa aaccagaagt ttctcaaaca agtagcaagg taactgcaac tcaaactaag
     5821 actctacctg caacaggttc tgtcgagtca atgttaggat tgacaggttt ggcattgcta
     5881 ggaacattag ctcttgctaa ccagcgtaga cgtagaaatt aataacctag agagagttcc
     5941 agttggactc tctttttaaa atacgaacat tgacagcgat ttgcctcatc tcgagagaag
     6001 ctatgctata atgaaacaaa taaaaaagac gctctttgtt atgccaattg ggaaagccgt
     6061 cagtttttta tggctggttg acaatggttg gcagctattg agcgaaaata ggaggaaaga
     6121 tggtttcaac agcaacgaca ctcggtggat ttacctttga taattgtttg atgaatgcgg
     6181 caggggtttg gtgcatgacc aaggaagaat tggatgcggt taagaactcg aaggcgggta
     6241 cttttgtgac aaaaacagca accttggact accgcgcggg taatccagaa ccacgttatc
     6301 agaatgttcc gcttggttct atcaattcga tgggcttgcc aaatcagggc ttggcttact
     6361 atttggatta tctactagaa ttgcaggaaa cggagccaga acacacattt gttttatctt
     6421 tagttggaat gtctcctgat gagactcacg agattttgag aactgtagaa gccagtgatt
     6481 ttaaggggct gatagagtta aatctttctt gtcccaatgt ccctggaaaa ccgcagattg
     6541 cctatgattt tgaaacgaca gaaaccatct tgcaggaggt cttcacttac tttaccaaac
     6601 cactcggtat taagttacca ccttatttcg atattgtgca ttttgaccaa gcagcagcga
     6661 ttttcaacca gtttcctttg aagtttgtca actgtgtcaa ttcgattgga aatggtctct
     6721 atatcaagga tgaatcagtt gtcatcaagc ctaaaaatgg ttttggtggt atcggtggag
     6781 agtatatcaa gccgactgct cttgccaatg tccacgcttt ttaccagcgc ttgaaaccgg
     6841 agattcagat tgttgggact ggtggcgtct tgacaggtcg ggatgccttc gaacacattc
     6901 tctgtggtgc cagcatggtt caagttggaa caaccctgca aaaggaaggt gtggcagcct
     6961 ttgaacgcat tacggctgaa ttgcaggcca tcatggctga aaaaggctac gagaccattg
     7021 aagattttcg tggcaagcta cagcacttag atgactgaga tcatctgttg aagatataaa
     7081 aagaagctaa cattgtaccg ttcccccaga tagtctttta gggagttagg aaggggtaat
     7141 gttagctctt tttaaatggt ctgtgaagat cggtctgata atcgtttgag gaatggaata
     7201 catagtcaga aacatatatt tgtgagatgg aattctgatt ttatttagat tttttagcaa
     7261 aaatgtcgta tactaatatt ataatctcta tttataagtg atgtactttt atggaagaaa
     7321 tagttttttg agggactact gactgtattt tgaacaaagg ttcttaagta gggagtatga
     7381 gggtaaaggt atggagaaaa gggcgaacta tattcgcaga aaacgatatg cgtcctatcg
     7441 gacaaagatg catttgtttt ttatttgtgg cttagcaact attatcttgg cgattattat
     7501 tgtaagcgag cacctagttc ctaggctgaa tcaggcatca gaatcaatgc attcagataa
     7561 ttctgttcgc atcatggcgc atggggattt gctctatcac ttgcctattc ttcgaggagc
     7621 agaacagcca gatggaagtt acgatttttc tgagaatttt acctacgtaa agccctggat
     7681 agaacaggct gatttcgcta tcgcagactt tgaagggacc atttccccag atgtcgaatt
     7741 agcaggttac ccacttttta atgcgcctgc cattgtcgcc aataatatcc atgatgcagg
     7801 ctacgatttg gtggacttag cccacaatca tatcttggac tcacatcttt ctggattggt
     7861 ttccactgtc aatacattta gagatgcagg tgtggataca gtcggtgtct acgccgaagg
     7921 caatcgtgca actgcaccac tctacattcg ggaagtcaat ggtatccgta tagctgtcct
     7981 agcctatgct tacggtttca atgggatgga ggctttgctg agtcaggagg aatatgatgc
     8041 ctatttatcg gattttgata aagaaaagat gcgggcagag attgagcgag ctgagaaaga
     8101 ggcagatatt accatcgtca tgcctcagac gggtgtggaa taccagttgg agcctacgga
     8161 ggaacagacc agtttgtacc atcaaatgat tgattgggga gcagacatcg ttcttggtgg
     8221 gcatccgcat gtagtcgagc ccgcagagat tattgaaaaa gatggtcaga gaaaattgat
     8281 tatctattcg atggggaatt tcctgtccaa tcagcgtatt gagagcatgg atgacacacc
     8341 aaattcccag tggaccgagc ggggtgtgtt gatggatgtg accattcaga aggtcaatgg
     8401 tgagaccacc atccagatgg ccagggctca tcctagctgg gtcaatcgtg tctggaaggg
     8461 gacctattcg ccagagggct atgagctgta tggctaccag acctatatcc tagaggactg
     8521 gatagcaggt ggtccctact atgggcaatt ggatgcggct actcaggcac ggatagagga
     8581 ggcctatcag gaaatgaatg catttgtagg attagaatgg taaggagaag acgatggaag
     8641 ttggattgat tgcgaccgaa gtaagagttc ggtaattgat aaaacagaat atagagaaag
     8701 ccttggaagt agttgtttcc aaggcttttt atctatcctc agcagtagat gggtcaaagg
     8761 gagaggttga agggaaggat gacttctcat tgagacaccc ttgatttgta aatcgttaaa
     8821 ttttagagaa atattcccct tattttttat ttaccagttt atcaaaatgg ctagtatagt
     8881 gtaattttaa cttgtcttct cctaaaagat cgagcacttg tatggcttgt ttcatttttt
     8941 caattccttt acctgatcgc ttaaattcaa agtagccagt agcataaaga aaaacagttt
     9001 gttcataaaa gtttagttca ttgtctaata atttttttat ctcactaatc aaataggaac
     9061 aatttgaaaa tttttccata tctatgctaa gaatgaaaca atttatagct agctgagtaa
     9121 cgatttgctt attggtttta tttaatgaag aatagatgta attatgtagc atttcttttg
     9181 ttaataggaa gtaggagtcg taattaattg ttcgcacaca gttacctaat aaaatgattt
     9241 catagtaacc ccagttttca attttaaaga gatagtctgt tagttgaagc aactcttcat
     9301 ctgatggaac aatgttactg tctagtgtat gtagaatgga ctttaccata gttctcacat
     9361 acggatttaa attatatttt gaagagtttg aaagtaatga ggctatatta tctatatttt
     9421 gcgatgaata ttgtttacga atatactgca ttaatttagc aaatgattct gtgttggtat
     9481 aatcactatc atgaagaata agaaattcat ctagagaaat gtttaatttg tctaaaatat
     9541 tgataagtcg aacacaagat atttctgact ctccacgttc aaaacgagat atttgtgatt
     9601 tagaaagatg ctcatctgct agagaacata gactgatttg ttttccttgt cttacttttc
     9661 tcaaagtttt tccaagatgt aatttcatct gatttcccac tttcccaaca aaaaattgaa
     9721 ctagttttat ttattgtaca ataaataaaa acggaaagga agtccaagta tgaagaaaat
     9781 atcaaaactt atcccgattt tggtattgat tatggacatc attatcattg ttggtgggta
     9841 aatcgattag gtgtacaccc aattctttag gcatatgcct aaagaattgt tgcctattag
     9901 gtaataagga gacgtgtact tatcttatcc aataaatagt gaggaggtga tacaaatata
     9961 caagtaataa atggagtaga aagctgaaag agaattatag tagtaacact ttaatttttc
    10021 tatattaaat taaataaagg gcagttgtta gattataaat aaaaaatagt ataatagatc
    10081 catagattat aggatttttt atagctcaag tctttattat tattgcagga atattgctag
    10141 acagggttta aataatcttt agttttattg tagaatctgt tatagataat ttactaaaaa
    10201 atattattta acagaaaaaa tagattgaca aaatctatca agtatgacgc tatgtatgcg
    10261 aaaaaattta aaggaggatt ggctaatggt taaagtatcg ttgataaaaa atgacaaatt
    10321 gtcaaatgta caaaatataa caggttttgc acctgttatt gggtatgagc catgggcttt
    10381 aaggacgata gagagtgtta agcaatcatt agtagatgga caacctattt taatccgtat
    10441 tcattctgca ctatcttatc ctacagatag tgatagaaat acagctaagt tagatatgga
    10501 atctcatgcg gtattaatta ttggatatga tgattttaag caagaattcg atattctaga
    10561 cccttggaga gttgattgga acggttcaaa agggggactt tcaaccatta aatacgaagc
    10621 acttcctata gtatgtgtta atgcgacggc tgaaaagagt actcgttgtt cactaattca
    10681 gaagaaagta gctgtgtata cagataagtt ttataatacc agcgttagta ttgattttgg
    10741 attttatgtc cccaaaggat acataataga tcaaaaacaa tctaaattta ctgagtttga
    10801 tgtaactgca tcttacactt taaacggatc agtattcact tatcataata ttattcgtgg
    10861 tgaatggtgg gtagggcaga ctgcaaaaat ggaaattccg attggtaagg atatttctga
    10921 ggaagtagat gtgcattttg ctgtatcatc taaattagtg ggagatagac cataccacta
    10981 tgaagatatt ataaaatttg agtttaatga aatggttgat gtgactagta gctctcagca
    11041 caaatataag caggaatttg accttaataa ggttgtagtt taagtaatta aagatatcat
    11101 atttgtatat gatatcttta actgtataga ggtgaagata tgtttagaaa aaaattaata
    11161 gaagatattg aaaatactaa tttgctattt tctaatttaa aatgggcttt acctattgat
    11221 ggattagtta gaactcc
//
LOCUS       DASFQD010000078        11220 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.079, whole genome shotgun sequence.
ACCESSION   DASFQD010000078 DASFQD010000000
VERSION     DASFQD010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11220)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11220)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11220
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.079"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            179..1363
                     /gene="secY2"
                     /locus_tag="U1021_001551"
     CDS             179..1363
                     /gene="secY2"
                     /locus_tag="U1021_001551"
                     /inference="COORDINATES: protein motif:HMM:TIGR02920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein translocase subunit
                     SecY2"
                     /protein_id="HEM4712075.1"
                     /translation="MNKIQPGIRKLAVTAGIIMLFLLGRSLPLPFLQLDAYINPEEVN
                     SFNLAQISLFSLGLGPWMNATILLSLFTRRKSASESPRMAEYRKNALMLLIAVIQGLG
                     IAVSFSYTVSGSQLYQSIAGVTLVSVAGAFVISWLISLNSNFGVGGSAMLVLVNILVG
                     QLVTIPKVMELSGTYLTPYLWFGLLWILVTIYLIVVFEKAEYRIPVQRITINNTLADE
                     AYMPVKIFLSGGMSFMYSYTLFSFPQYVLVLLAYFFPQYGTIIKALGRYFSMLDWEGM
                     VVFLLILYVLTVSFAYINLNPTDKAEELRKSGDYIPGVRPGKPTKQYLSKIASRLGNF
                     NAFYLVVMSGIPMGISMIYPELRPIANLPGVVMMTASIFLTIIIEFRVMRLKKRYTSL
                     FK"
     gene            1377..2924
                     /gene="asp1"
                     /locus_tag="U1021_001552"
     CDS             1377..2924
                     /gene="asp1"
                     /locus_tag="U1021_001552"
                     /inference="COORDINATES: protein motif:HMM:TIGR03713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp1"
                     /protein_id="HEM4712076.1"
                     /translation="MMMFYFIPSWYPEKRTWYDNTELWYRRNMSSYFDDTINQLRMFV
                     NVGEPSQLIVLNYMPNLRYYTHRYGLFEVPYWSVFDHIQGITGDDFQPLDYLDMEWPD
                     GIEFINSPFLVIARLKGQLFAQLEFGEEGNLVWIDFFDQDVQSKKMVFDDRGFLSSIL
                     YYQDGQPYYQDYLGKDGVYRIREYLLPDNQQVLINPTRQYHFLKNTYDSIEELLSEQL
                     ERFLSAQPKSTIVLAADGRHHETVAKAISRHTLVLSYFGNRFQVDSTSQLQVERLLSP
                     HLIVTDSLKMQQQLENMTSHPVHQVSLYDTRLALGKSQRLKELYIYFLLDGVHKTQWK
                     VALQEIFVAMKSNEYIHLMLVTYQSEKDYLDRLKEEIELELEQMPEEYLKLKENTKHQ
                     LFEVGDEEEEVERVAFTPLHSEVDIMVALDSVRLIIDLADEPNLYTQIAGISAGIPQV
                     NARQTEYVEHLKNGYILTDGGNLGAALNYYLDGLSHWNESLIYSVRKISDYTSGVLVE
                     KIKEKVE"
     gene            2927..4582
                     /gene="asp2"
                     /locus_tag="U1021_001553"
     CDS             2927..4582
                     /gene="asp2"
                     /locus_tag="U1021_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp2"
                     /protein_id="HEM4712077.1"
                     /translation="MSKKKIHVLQVGTEDWSQAFAIPESLEWHYLPSDKLSDFLKEQE
                     TIEAKRREATALYEEFALQPEANEFYLQELEKMLKVELRTVAYSILLLSDKNYPAELT
                     KLDLLIDAHRLFYPSNWEAEDRTTANFLYKKVAQRYDWNKKEELIYTFSKALFSGQFG
                     QKITLAELEISTNFGGRIDYEGQNYVCLEGDFGQDFQQIAYYRYNIQAYKDVFLNLFL
                     NHVVEPSCAIKLNVQLIQDGSTATIVKEWSFEGKELREQLFLDPNENGYLFISIHAKG
                     NGLIKIGSCHQRWSRNGLGEFVLGGERLVDDDLQEIYTFFHPMDFTPPLCVYFSGFRE
                     AEGFEGYRMIRGLNKPFMLICDPRLIGGAFYLGSEDLEQQIVQKIQEKLDYLGFNSSQ
                     LILSGISMGTFGATYYGADLHPYGIVLAKPVLSLGEVALMEKVHRPGGFATSIELLKS
                     LYGDLSMASAERLNNRYWDKMTEGVFKNTQFAITYMKNEDYDASAFEKMIHYSKSTGA
                     TIHARGIAGRHNDAFGSIYGWFVNRYKAMIKNGFDTKEEAHES"
     gene            4572..5522
                     /gene="asp3"
                     /locus_tag="U1021_001554"
     CDS             4572..5522
                     /gene="asp3"
                     /locus_tag="U1021_001554"
                     /inference="COORDINATES: protein motif:HMM:TIGR03711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system protein Asp3"
                     /protein_id="HEM4712078.1"
                     /translation="MKVSIRWKYFIRSAYSYGSTLRFEDGKVYFENPLMPPSFELNRW
                     ESLTNFQSRRVQPQLPLLKKGVTYRLDLKASVYPTASVYVQVEFFNRYREKIDFVILK
                     DSSSEFTYPKEAYSYEIALINAGCSEMEFTELILEEKCTISDTLESYLKGLNYPAQTG
                     VLNIIFLEEKRDLLEKQPILSRLMEELKNVILIDDESFSMLNQNHQDYIAECVQDEQF
                     HTTRLISYGPKGNFASLFYKHRLPKTQVYSSLDFWSESRYLEELTKIGMLEEEIVTIL
                     AEKEESFFYAGLANSGLKLVAHLLDPLEALLEFENEKGRS"
     gene            5522..7900
                     /gene="secA2"
                     /locus_tag="U1021_001555"
     CDS             5522..7900
                     /gene="secA2"
                     /locus_tag="U1021_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003087918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system translocase SecA2"
                     /protein_id="HEM4712079.1"
                     /translation="MGLGQYFKLDYYRVRRLKKIYQRIDSLKDEMGQLTDEELAGKTK
                     EFKERLAQGETLDDLLEEAYAVVREAAKRVLGMFPYEVQVLGAIVLHEGNVAEMKTGE
                     GKTLTATMPLYLNALEGKGVMLITTSSYLAQRDADEMGAVYRFLNLSVGVGVVGKEDR
                     NKSSQAKREIYGSDIVYTTNSALGFDYLFENLATDLKQKFLRPFHYAIIDEVDAVLLD
                     TAQVPLIVSGSPRVQSNLYTIANHFILSLTEGESYYYDRELKEVWLTQKGMDEAERYF
                     SSPNFYIADNQELVRHVVLALQAHKCFTLGKNYVVQDNKVQLLDKTDGRVMSWTRLQG
                     GVHQAIEQKEGVKITPEMRSIASVTYQNLFLMFNKLSGMTGTGKTAESEFIETYNMEI
                     VQIPTNKPVIRKDYPDKIYTTMPEKIQASLDLVKKVHATGQPILLVTGSVNMSELYSE
                     LLLLEGIPHSLLNAYNAAKEAQMVAEAGQFGTITVATNMAGRGTDIKLGPGVKELGGL
                     AVIGTERMKSQRMDLQIRGRSGRQGDPGFSQFFACLEDDLVIENGGKWIQTYFENNKD
                     KIDPTKPEELTGRRFKKALRHAQEASDGSGRSSRSMTLQFDESVKLQREYVYRERNAI
                     IEGTNEALDILQFAKEDVARYLKQHPVLDAHDLERYILDHITYDFHSFPEHLELQNHS
                     QVQDFLLSIIEQEIQRKKEVLTKDYLQFERLAVLKAIDECWVEEVDYLQQLRVIAGAR
                     QAAQRNPVFEYHQEAYKGYQKMKEEIRRNILQNILLSDVSYTEKGDMQVYFA"
     gene            7916..9433
                     /gene="gtfA"
                     /locus_tag="U1021_001556"
     CDS             7916..9433
                     /gene="gtfA"
                     /locus_tag="U1021_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002895931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system glycosyltransferase GtfA"
                     /protein_id="HEM4712080.1"
                     /translation="MIVYNINLGIGWASSGVEYAQAYRAQLLRRKGIKTKFIFTDFFG
                     QDNISDMTRNIGFKDEEVIWLYTFFTDQKVAPTTYTLDQLRQDVTGTITREERDGKIV
                     RFFYEEQNFFLTAYLCQEDKDIVHHVEYVSSGNLIRKDFFTYMRSFSEYYTPRDSRGH
                     LYLRRFFNEDGSVAYEEVIDGNKSVYRMPDAVISSKEEWIAYFMKKLHLTSKDIIILD
                     RATGTGQAVFANKDPARLGVVIHAEHYSLNQVTDQTILWNNYYDYQFVHADCVDFFIT
                     STKRQKEVLEEQFEKYVGKVPRIVDIPVGSIDDVRRAEKRRPYSIITASRLATEKHVD
                     WLTKAVVAAKKDLPELTFDIYGSGGEHAKIEAIIKEHQAEDYIHLKGHHDLTEVYQDY
                     ELYLTASKSEGFGLTLLEAIGAGLPLIGFDAPYGNQTFIQEGRNGYLLPFPTVEDEQE
                     IVSQYRQAIRSFFSREDRHEMQEASYQVASAFLTHEIEKKWVELVEEMVGDDSFI"
     gene            9417..10742
                     /gene="gtfB"
                     /locus_tag="U1021_001557"
     CDS             9417..10742
                     /gene="gtfB"
                     /locus_tag="U1021_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017646253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system glycosylation chaperone
                     GtfB"
                     /protein_id="HEM4712081.1"
                     /translation="MIHLFDTYQQSSWDLHYSLICSGYNNPTIVLNDDGFLPHDVTSP
                     FRYFTEYDTVQGQALYFNQVKTPTFWEIRGDGSQAAIYDYATKRAQIHYAQPSHKRLV
                     KAVDWYDETGKIIVTDCYNDKGMRFAQTSYDRQGQAMQTSYYKADGQEVLVENHGTGD
                     WILNYQSRIYFFKNRHDWLRFYFKTAGFKLDRIFYNSLGQSFLTAFYLDEDGEDILFW
                     QEPIHDSIPGNMLLLLNKQSRRPTKVVVQDKEAYDNLMALASPEQQKNIAYLGFLYPF
                     KEQTEFKPEALILTNSDQIEQLERLVTSLPQLHFHIGAITEMSSHLMTFGNYENVTLY
                     PNIAMDLVHQLYQRTSLYLDINHGNEILSSVRTAFEYRQLILGFTETLHASTYVAREN
                     RYASSQVDAMITKIQTLLAKPNHERDALLKRQEEEANLTTVADYQRVIN"
     gene            10751..10930
                     /locus_tag="U1021_001558"
     CDS             10751..10930
                     /locus_tag="U1021_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712082.1"
                     /translation="MKHEHPLKESIEQRLEEERYVIPKKNKEKKRFNFQLIVTISILI
                     SLGLIILQILQFFLK"
BASE COUNT         3437 a         2013 c         2502 g         3268 t
ORIGIN      
        1 tgaaaacgaa atgttcttca tgcgtttgac gtggagtctt gacttgcaaa aaagccattt
       61 ttagcatata ctgtatgata tactcccctt atagtggaca gtgaaaaaac aaaaatttcc
      121 agcagataag tttggctatt tttattttac gatgacgaag caggagaaaa aagtaagaat
      181 gaataaaata caacctggga ttcggaagct agctgtaaca gcaggaatca ttatgttatt
      241 tctactgggg cgcagcctac ctctaccttt tctacagttg gatgcttata tcaacccaga
      301 agaagtcaat agttttaatt tagctcagat tagtttgttt tctcttggat taggcccatg
      361 gatgaatgcg actattttac tttctttatt tacacgcaga aaaagcgctt cggagtcacc
      421 acggatggct gaatatcgga aaaacgcgtt gatgttactc attgctgtta ttcaaggttt
      481 aggaattgct gtttcattca gttatacagt tagtggtagt cagctttatc aatcaatagc
      541 tggtgtgact ctagtttcag tggcaggggc ttttgttatt tcttggttaa ttagcttgaa
      601 tagtaatttc ggtgtaggtg gttcagccat gctcgtgttg gtgaatattc tcgttggaca
      661 actggtaacc attccgaagg ttatggagtt gagtggtacc tatctaacgc cttatttatg
      721 gtttggtcta ttgtggattt tagtaaccat ttacttaatc gttgtatttg aaaaagcaga
      781 gtaccgaatt cctgtacaac ggattacaat taacaatacc ttggccgatg aagcatacat
      841 gcccgttaag atcttcttat ctggtgggat gtcatttatg tattcgtata ccttatttag
      901 ctttccccag tatgtcttag tcttgcttgc ttattttttc cctcagtatg ggacaattat
      961 caaggcgctc ggacgttact tctcaatgtt ggattgggaa ggtatggtag tttttctcct
     1021 aattttgtat gttttgacag tgagctttgc ctatattaac ctcaatccaa ccgataaggc
     1081 tgaggagttg agaaagtctg gtgactatat accgggagtg agaccgggga aacctactaa
     1141 gcaatatcta tcaaaaatag cttctcgtct agggaatttt aatgcgtttt atctggtcgt
     1201 tatgtctggt attccaatgg gaatctccat gatttatcca gaattacgcc ctattgccaa
     1261 cctgcctggt gtagtgatga tgaccgcaag catcttttta acaattatca ttgaatttcg
     1321 tgttatgcgt ctgaagaaac gctatacatc tttatttaaa taaatgaaag aaagggatga
     1381 tgatgtttta ttttatcccc tcatggtatc ctgaaaaacg tacttggtac gacaacacag
     1441 agttgtggta tcgtcgcaat atgtcctctt attttgacga tacgattaat cagctgcgta
     1501 tgtttgtcaa tgtaggtgaa cctagtcaac taatagtatt aaattatatg cccaatctgc
     1561 gctattatac gcatcggtat gggctgtttg aagttccata ttggtccgta ttcgaccaca
     1621 tacaaggaat tacaggtgat gattttcaac cgttggacta tttggatatg gaatggcctg
     1681 atggaattga gtttatcaat agtccttttc tagtcattgc gcggttaaaa gggcaattat
     1741 ttgcccagtt ggagtttggc gaggaaggaa atcttgtttg gatcgatttt tttgaccaag
     1801 atgttcaaag taaaaaaatg gtttttgatg acagaggctt tctatcaagt attctttatt
     1861 atcaagatgg ccaaccttat taccaagatt atctcggaaa agatggagtc tatcgcattc
     1921 gagagtacct tttaccggat aatcagcaag tactgattaa cccgacaagg cagtatcatt
     1981 ttttaaaaaa tacatatgac tcgatagaag aactgctcag tgaacaacta gaacgattcc
     2041 tatctgctca acctaaatct acaatcgtgt tagcagcgga tggaagacat catgagactg
     2101 ttgcaaaagc aataagcaga catacattgg ttttgtctta ttttggaaat cgatttcaag
     2161 tggattctac cagtcaacta caagtagagc gtctactctc ccctcatctg attgtgacgg
     2221 atagtttgaa gatgcaacag caacttgaaa atatgacgag tcaccctgtt catcaggttt
     2281 cattgtatga tacacgactt gcgcttggaa aaagtcaacg cttgaaagaa ttgtatatct
     2341 atttcttgtt agatggagtg cataagaccc agtggaaagt agcgttacaa gaaatttttg
     2401 tagcgatgaa atcaaatgaa tatatccatt taatgttggt tacctaccag tcggaaaagg
     2461 attaccttga tcgattaaaa gaggaaatcg agttagagtt ggaacagatg ccagaagaat
     2521 acttaaaact gaaagagaac acaaaacacc aattgtttga ggtaggagat gaggaagaag
     2581 aggtggagcg cgttgcattt actcctcttc attccgaggt ggacatcatg gtagccttag
     2641 attcggttcg tctcattatt gatctggcag atgaaccgaa tctatacaca caaatcgctg
     2701 gcatcagtgc tgggattcca caagtcaatg ctagacagac agaatatgtc gaacacttaa
     2761 aaaatggcta tatcttgact gatggtggaa atttaggggc ggcgctaaat tattatttag
     2821 acggattaag tcattggaat gagtccttga tttattctgt tagaaaaata tcagattata
     2881 caagtggtgt cctagtagaa aaaattaaag aaaaagtaga atgacaatgt caaaaaaaaa
     2941 aatacatgta ctacaagtgg gaacagaaga ctggtcccaa gcgtttgcta ttccagagtc
     3001 tttagagtgg cactatctcc cttcggataa actatcagat ttcctaaagg agcaagaaac
     3061 tattgaagca aaacgaaggg aagcgacagc actctatgaa gagttcgcgc tacaaccaga
     3121 agcaaatgag ttctaccttc aggagttgga aaaaatgctg aaagtggagc ttcggacagt
     3181 tgcctatagt attttactgc tttcagacaa gaattatcct gcagaactta ctaagttgga
     3241 tttgttgatt gatgctcaca ggttatttta tccaagtaat tgggaagcag aagataggac
     3301 gacagcaaat tttctatata aaaaagtagc ccaacgctat gattggaata aaaaagaaga
     3361 gctcatctac accttttcta aagcattatt tagtggacaa tttggtcaaa agattacctt
     3421 agcagaactg gaaatttcta ctaattttgg tggaaggata gattatgagg gtcaaaatta
     3481 tgtttgttta gagggagatt ttggtcaaga tttccagcaa attgcctatt atcgttataa
     3541 cattcaagct tataaagatg ttttccttaa tttatttctg aatcatgtag ttgagccaag
     3601 ctgtgcgatt aaattaaatg tgcaactcat ccaagatggt tcaacggcga ctattgtaaa
     3661 agaatggtct tttgagggga aagaattaag agaacaactc tttttggatc ccaacgaaaa
     3721 cggctattta tttatatcca tccatgccaa agggaatgga ctgataaaaa tcggttcttg
     3781 ccatcaacgt tggagtcgaa atggactggg agagtttgtc ttgggaggag aacgcctggt
     3841 ggatgatgat ttgcaagaaa tctatacttt ctttcatccg atggatttta ctcctcctct
     3901 ttgtgtctat ttttcaggtt ttcgggaagc agaaggtttc gagggctacc gcatgattcg
     3961 tggcttgaac aaaccgttta tgttaatctg tgatccacgt ctgattggtg gtgcctttta
     4021 tctaggcagt gaggatttag aacaacagat tgttcaaaaa atacaggaaa aattagatta
     4081 cctaggattt aatagtagtc aactaattct gtcaggaata tcgatgggaa catttggagc
     4141 gacttattat ggtgctgacc ttcatcccta cggcatcgtc ttggcaaagc cagttctaag
     4201 tttgggtgag gttgctctga tggagaaagt tcatcgccca ggtggtttcg caacctctat
     4261 tgaactatta aaatccttat acggagattt gagcatggca tcagctgaaa gattaaacaa
     4321 tcgctactgg gataagatga ctgaaggagt gtttaagaat actcaatttg caattaccta
     4381 tatgaaaaac gaagattatg atgcttcagc atttgaaaaa atgatccact atagcaagtc
     4441 tacgggggct actattcatg ctagaggcat agctggaagg cataatgatg cctttggttc
     4501 aatatatggt tggtttgtga atcgctataa agcaatgata aaaaatggat ttgatacaaa
     4561 ggaagaggcg catgaaagtt agtatccgtt ggaagtactt tatacgttcg gcttatagtt
     4621 atggaagtac acttcggttt gaagatggaa aagtctattt tgaaaatccg ttaatgccac
     4681 ccagcttcga gttgaatcgt tgggaatcct tgactaattt tcaaagtcgt agggtacagc
     4741 cacaactacc tctgttaaaa aaaggagtga cctatcggct agacttgaag gcttctgtct
     4801 atccgacagc atctgtctat gtgcaggtag aatttttcaa tcgctatcga gaaaaaattg
     4861 attttgtcat tctaaaagac tcttctagtg aatttactta tccgaaagaa gcctattcct
     4921 atgagattgc tttaatcaat gcaggctgta gcgaaatgga atttacagag ttgattttgg
     4981 aagaaaaatg cacaatttca gacacgcttg aaagttatct gaaaggttta aattaccctg
     5041 ctcaaactgg tgtattgaac attatttttc tcgaagaaaa acgggacttg cttgaaaaac
     5101 aaccgatttt gagtcgattg atggaagagt tgaagaatgt tattttaatt gatgacgagt
     5161 ccttctctat gctgaatcag aatcatcaag attatatagc agaatgcgtc caagatgaac
     5221 agtttcatac cacccgactc atatcctatg gacctaaggg aaactttgct agcttatttt
     5281 ataagcatcg cctccctaag acacaagtct actccagttt ggatttttgg tctgaatcac
     5341 gctatttgga agaactgacc aagattggta tgcttgaaga agagattgtg accattttag
     5401 cagagaaaga agagtctttc ttttatgcag gactggcaaa ttcaggttta aaattagtgg
     5461 ctcatttact tgacccctta gaggcattgt tagagtttga aaatgagaaa ggacggtcgt
     5521 aatggggctg ggacagtact ttaagctgga ttattatagg gttcggcgct taaagaaaat
     5581 ctatcagcga attgatagtc taaaagatga gatgggtcaa ttaaccgacg aggaattggc
     5641 tgggaaaact aaggaattta aggaaagatt agctcaaggt gagacgctcg atgatttatt
     5701 agaagaggct tacgctgtcg ttcgtgaagc agccaagcgc gtgctaggaa tgtttccgta
     5761 tgaagttcaa gttttaggcg ctattgttct tcatgaaggt aatgttgctg agatgaagac
     5821 tggagaagga aagacgttga cggctaccat gcccttgtac ttaaatgctt tggaaggtaa
     5881 gggagtcatg ttgattacca cgagctctta tcttgcacag cgggatgccg atgaaatggg
     5941 ggctgtttac cgttttctga atctaagtgt cggagttggt gtcgtcggaa aagaagatcg
     6001 aaataaatcc tcccaagcta agcgtgagat ttatggctct gacattgtat ataccaccaa
     6061 ctcagctttg gggtttgact atttgtttga aaatcttgcg acagatttga aacaaaagtt
     6121 tttacgtcct tttcattatg ccattattga tgaggtagat gcggttcttc tagacacagc
     6181 tcaagtacca ctgattgttt cgggatcacc tcgggttcaa tcgaatttat atacaattgc
     6241 taatcacttt attctcagtc tgaccgaagg agagagctac tattatgacc gagagctaaa
     6301 agaagtctgg ttgacacaga aagggatgga tgaggcagaa cgctatttca gttccccaaa
     6361 tttctatatt gcagacaatc aggagttagt tcgccacgtt gttttagcct tacaagccca
     6421 taaatgtttc acattaggga aaaactatgt cgttcaagac aacaaggttc aattgttgga
     6481 taagacagac ggtcgtgtta tgtcatggac ccgcctccaa ggtggtgttc atcaggcgat
     6541 agaacaaaaa gagggcgtta agataacgcc agaaatgcgt tcgattgctt cggttaccta
     6601 tcaaaatcta ttcttaatgt tcaataaact ttctggtatg acagggactg gtaaaacagc
     6661 tgagtcagaa tttatagaga cctataatat ggaaattgtt cagattccaa ctaataaacc
     6721 agtcattcgt aaagattatc ctgataagat ttacacgacc atgccggaaa aaattcaagc
     6781 ttctttggac ctggtaaaaa aagtccatgc aactggtcag ccgattcttc tagtgactgg
     6841 ttcggtcaat atgtccgaac tctattcaga actcctgttg ctagaaggga ttcctcacag
     6901 ccttctcaat gcctataatg ctgccaaaga agcgcagatg gttgcagaag ctggacaatt
     6961 tggaacgatt accgtagcga cgaatatggc cggacgagga acggacatca aactcggtcc
     7021 aggcgtaaaa gaattgggtg gtttggccgt tatcggaacg gagcgaatga agagccagcg
     7081 gatggacttg cagatacgag gacgttcagg acgacaggga gatccaggat ttagccaatt
     7141 tttcgcctgc ttggaagacg atctggtaat tgagaatggc ggcaagtgga ttcagactta
     7201 ttttgaaaac aataaagata agattgaccc aacgaagcct gaggaattga ccggtagacg
     7261 atttaaaaaa gccttgcgac atgcacaaga agcgagtgat ggttcgggac gctcttcacg
     7321 aagcatgacc ttgcagtttg acgaaagtgt caaattacaa cgagaatacg tctatagaga
     7381 aagaaatgcc attatcgagg gaacaaacga agcgctcgat atcctgcaat tcgccaagga
     7441 agatgttgct cgttatctca aacaacatcc tgttttggat gcccatgatt tggagcgcta
     7501 tatcttggac cacatcacct atgattttca tagttttcca gaacatttag aattacaaaa
     7561 tcatagccaa gttcaagatt tcttgctgtc tattatcgaa caagaaattc aacgaaaaaa
     7621 agaagttctg acaaaagatt atttacaatt tgaacgcttg gctgttttga aagcgattga
     7681 tgaatgctgg gtcgaagaag tggactatct acaacaactc cgcgtcattg caggagcgag
     7741 acaagcagcg caacgcaacc cagtatttga ataccaccaa gaagcctata aaggctatca
     7801 aaagatgaaa gaagaaataa ggcgaaatat cttacagaat atcctgttaa gcgatgtctc
     7861 ttatacagag aaaggagata tgcaagtata ttttgcgtag gaagaagagg aagttatgat
     7921 cgtctacaat atcaatcttg ggataggttg ggccagtagt ggtgttgagt acgctcaagc
     7981 ctatcgtgct caattattac gccgaaaagg aatcaaaacc aagtttatct ttacagattt
     8041 tttcggacaa gataatatat cagacatgac acggaatatc gggttcaagg atgaggaagt
     8101 catctggctc tataccttct ttacagacca aaaggtagca ccaactactt acacccttga
     8161 ccaattgaga caagatgtta caggaacgat aacgcgagaa gaacgtgatg ggaagattgt
     8221 tcgtttcttc tatgaagagc agaatttctt tttgacagcc tatctttgtc aggaagacaa
     8281 agatatcgtt catcatgtag aatacgtttc gagcgggaac ctgattcgca aggatttctt
     8341 tacctacatg agaagtttta gtgagtacta taccccacgc gatagcaggg gccacctata
     8401 cctcagacgc ttcttcaatg aagacggatc tgttgcatat gaggaagtga ttgatggaaa
     8461 taagagtgtt taccgtatgc cagatgccgt catatcttcc aaggaagagt ggattgctta
     8521 ctttatgaaa aaattacatc tgacgagtaa agatatcatt atcttggacc gagctacagg
     8581 aactggacaa gcagtctttg ctaataaaga tcctgctcgt ttaggtgtcg tcattcacgc
     8641 tgaacactac agtctcaatc aagttaccga ccagacgatt ctctggaata actattatga
     8701 ctaccaattc gttcatgctg attgtgttga cttctttatc acctcgacca aacgacaaaa
     8761 agaggtctta gaagagcagt ttgaaaaata tgttggcaag gttcctcgta tcgtggacat
     8821 accagttgga agtattgatg atgtcagacg tgcagaaaag agaagacctt actccattat
     8881 caccgcttca cgtctagcaa cagaaaaaca tgtggactgg ctgaccaagg ctgtggttgc
     8941 tgccaaaaaa gatctgccag aactcacttt tgatatctat ggtagcgggg gtgagcatgc
     9001 taaaattgag gctattatca aggaacatca ggcagaagac tatattcacc tgaaagggca
     9061 tcatgatttg accgaggttt atcaagatta cgaactctac ctgaccgctt caaaaagtga
     9121 gggctttgga ttgaccttgt tggaagctat cggtgcaggc ttacctctta tcggttttga
     9181 tgcgccttat ggaaaccaga cgttcattca agaaggacga aacggttatc ttttgccatt
     9241 cccaactgta gaggatgagc aggagattgt ctcacaatat cgtcaagcta ttcgtagctt
     9301 ctttagtcgt gaagatcgtc atgaaatgca ggaagcttct taccaagtag catccgcatt
     9361 cttaacccat gaaatcgaga aaaaatgggt agaattagta gaggagatgg taggagatga
     9421 ttcatttatt tgatacgtac caacaatcga gttgggattt gcattattcc ctcatttgtt
     9481 caggatataa caatccgaca attgtgttaa atgatgatgg cttcttgcca catgatgtga
     9541 catcgccttt tcgatacttt acggaatatg atactgtgca aggacaagcc ttgtatttca
     9601 atcaggtaaa aacaccaact ttctgggaaa ttcgtggaga cggtagtcag gcggcaatct
     9661 atgattatgc gaccaagcgt gcgcagattc attacgctca accaagccat aagcgactgg
     9721 tcaaagcggt ggattggtat gatgagacag ggaaaatcat cgtgaccgat tgctacaatg
     9781 acaagggaat gcgatttgca caaaccagct atgatagaca aggacaggcc atgcagacca
     9841 gctactataa ggcggatggt caggaagtct tagttgaaaa tcatggcacg ggtgactgga
     9901 ttttgaacta tcagagccgt atttactttt tcaagaatag acatgattgg ttgagattct
     9961 acttcaagac agcagggttt aagctggatc ggatttttta caacagtttg ggacaatctt
    10021 tcttgactgc tttctatcta gatgaagatg gtgaagacat tctcttttgg caagaaccga
    10081 ttcacgatag tattccgggt aacatgcttc tgttgctcaa taagcagagc agaagaccga
    10141 ccaaggttgt ggtacaagat aaggaagctt atgacaatct gatggcactg gcaagcccag
    10201 aacagcagaa aaatattgct tatcttggct tcttgtatcc gtttaaggag caaactgagt
    10261 ttaaaccaga agctcttatc ttgactaatt ctgatcaaat cgaacagttg gaacgtctgg
    10321 tcacaagttt accgcagctg cattttcata ttggagcgat tacagagatg tccagtcact
    10381 tgatgacctt tggcaactat gaaaatgtga ccctctatcc aaatattgcc atggatttgg
    10441 tacatcaatt gtatcagcgg accagccttt acttggatat caatcatggt aacgaaatcc
    10501 tatcctctgt ccgtacagca ttcgaatacc gtcagctgat tttaggtttc acagaaaccc
    10561 ttcatgcgtc aacttatgtt gcgcgtgaaa atcgctacgc ttcctcgcaa gttgatgcta
    10621 tgattactaa gattcaaact cttctagcta aacctaacca tgagcgagat gctttgttga
    10681 agcgtcagga ggaggaggca aacttgacca cagttgccga ctatcagcgc gtgataaact
    10741 aggagggact atgaaacacg agcatccatt gaaagaaagc atcgagcagc gactcgaaga
    10801 agaacgctat gttattccga aaaaaaataa ggaaaagaaa aggtttaatt ttcagctaat
    10861 tgtcacaatc tcgattctta ttagtctcgg cttgattatc ttgcaaattc ttcagttctt
    10921 tttgaagtaa actttttggg agtgggaaag aactcgacca ttcatagaag agttcgtcaa
    10981 caagtcttta tttctagttg ttgagctgaa acagtctatt cccagactgt ttcactccca
    11041 cccccgcata gctctaaagg ttcggggaac ctttagaggt tggagatata gcgaacaaag
    11101 ttcgcatcag tcgttaagtc agagtagtga cagtttgagg ttggagataa ggcgaacttt
    11161 gttcgcaaca gtcgtaatgg tcagatttgg agtgtaaaac acgaattgct gagatttgct
//
LOCUS       DASFQD010000079        11089 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.080, whole genome shotgun sequence.
ACCESSION   DASFQD010000079 DASFQD010000000
VERSION     DASFQD010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11089
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.080"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(77..775)
                     /locus_tag="U1021_001559"
     CDS             complement(77..775)
                     /locus_tag="U1021_001559"
                     /inference="COORDINATES: protein motif:HMM:NF021206.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HEM4712083.1"
                     /translation="MRRNYSNYLNDFCNTYGPSGAQVARMVGMAEETIQAIRRGERKP
                     QQATKDKLNRFILNYKKENQPMTPITSQGTQTDIVGIDSRTVAEWTGKQHKELMRDIR
                     QYTEYLKSADLRCTDFWQETTYTASNGKENPCYMITKKGCEFIQHKMTGQKGAVFTAK
                     YINYFWEQGQQLQEATQILLDLSDQPTQPAIELNSDMAYIKNRLSELHSMTTMADIKV
                     GLAKTYRIAELMED"
     gene            complement(790..987)
                     /locus_tag="U1021_001560"
     CDS             complement(790..987)
                     /locus_tag="U1021_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017644139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4712084.1"
                     /translation="MKNNMRVLLAKQRKKVSDVHKATGISKSTLIALYYERTKKPDIE
                     TLQKVANYLGVTIDELLTPEE"
     gene            1150..1734
                     /locus_tag="U1021_001561"
     CDS             1150..1734
                     /locus_tag="U1021_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002890428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4712085.1"
                     /translation="MLRNNLAKLMIDRGISATQLFNDTGIARSTISKISNNNTDKISL
                     QTIDKICNYLEVTPEDFFDFWAYEVKIQCGFVNYDSLAEVRKEWEPIPDFNEPAFLLI
                     EFTRGKNTKKILEYKFNYCEEYEPGIPYNNGYLDSIILESPETETSIFDNMPIQFQNE
                     LIEEVKKALSETFDVLSFSPTLRDLDLFTLSGVK"
     gene            2245..3417
                     /locus_tag="U1021_001562"
     CDS             2245..3417
                     /locus_tag="U1021_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000605383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4712086.1"
                     /translation="MIMKITEVKKKDGSIVYRASVYLGIDAITGKKVKTNVTGRTKKE
                     VKNKTQQAIATFKTDGATRYQSATITSYKELAELWWSSYKHTVKPNTRGNIRGLLKNH
                     VIPLFGAYKLDKLTTPLLQSIVIKLADKANTGEAGAYLHYDKIHALNKRILQYGVVMQ
                     VLPYNPAREVILPRNAKKATRKKVKHFNDEQLKQFLGYLDGLDLTNYRNLYEATLYKF
                     LLATGCRINEALALSWSDIDLNNATINITKTLNRYGSINSPKSNASIRDIDIDSQTVA
                     MLKEYRRRQIQEAWTLGRSETVVFSDFIHDYPEDKTLGNRLTTRLKNIGLPNIGFHGF
                     RHTHASLLLNSGIPYKELQHRLGHSRISMTMDIYSHLSKENAKNAVAFYEKALGNL"
     gene            3555..3938
                     /gene="yaaA"
                     /locus_tag="U1021_001563"
     CDS             3555..3938
                     /gene="yaaA"
                     /locus_tag="U1021_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein YaaA"
                     /protein_id="HEM4712087.1"
                     /translation="MEFKLFDDYITLQALLKTTGILYSGGAIKGFLEENTILFNGEDE
                     KRRGKKIRVGDVITLPDHNTSITIVAPSAEEIKQHQEDQAEKERVAAIVKKLNQENKN
                     NKKQVKTPKKATKKTERKPVRFPGM"
     gene            3941..5035
                     /gene="recF"
                     /locus_tag="U1021_001564"
     CDS             3941..5035
                     /gene="recF"
                     /locus_tag="U1021_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HEM4712088.1"
                     /translation="MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIY
                     VLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGKVPLDIHLTDKGRVTKVNHLKQA
                     KLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
                     NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREEL
                     TIEYQTSIELTDDVNLIDKFLTELEKSRKRDLFKKNTGVGPHRDDVAFFINGMNAHYA
                     SQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQIKLLETITDTIQTF
                     ITTTSLDHLHKLPDSLKIFHIESGKVTESE"
     gene            complement(5307..6788)
                     /gene="guaB"
                     /locus_tag="U1021_001565"
     CDS             complement(5307..6788)
                     /gene="guaB"
                     /locus_tag="U1021_001565"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003090086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEM4712089.1"
                     /translation="MSNWDTKFLKKGFTFDDVLLIPAESHVLPHDIDLKTQLAPNLTL
                     NLPIISAAMDTVTDSKMAIAMARAGGLGVIHKNMSIAEQADEVRKVKRSENGVIIDPF
                     FLTPEHTIAEAEKLMATYRISGVPIVETLENRKLVGIITNRDMRFISDYSQPISTNMT
                     SDALVTAPVGTDLATAEAILHKHRIEKLPLVDENGRLSGLITIKDIEKVIEFPNAAKD
                     EFGRLLVAGAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIKEIREHFPTR
                     TLIAGNIATAEGARALYEAGVDVVKVGIGPGSICTTRVIAGVGVPQVTAIYDAAGVAR
                     EYGKTIIADGGIKYSGDIVKALAAGGHAVMLGSMFAGTDEAPGETEIFQGRKFKTYRG
                     MGSIAAMKQGSKDRYFQASVNEANKLVPEGIEGRVAYKGSVADMIFQMVGGLRSGMGY
                     VGAGNLTELHENAQFIEMSGAGLKESHPHDVQITNEAPNYSVQ"
     gene            complement(7020..8045)
                     /gene="trpS"
                     /locus_tag="U1021_001566"
     CDS             complement(7020..8045)
                     /gene="trpS"
                     /locus_tag="U1021_001566"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEM4712090.1"
                     /translation="MSKPIILTGDRPTGKLHIGHYVGSLKNRVLLQDAGQHELFVFLA
                     DQQALTDHAKEPQKIVESVGNVALDYLAAGLDPAKTTIFIQSQIPELAELTMYYMNLV
                     SVARLERNPTVKTEIAQKGFGEGIPAGFLVYPVSQAADITAFKANFVPVGNDQKPMIE
                     QTREIVRSFNHAYQTDILVEPEGIYPENEAAGRLPGLDGNAKMSKSLGNGIYLADDMD
                     TLKKKVMSMYTDPNHIRVEDPGKIEGNMVFHYLDVFGREEDKAEIEAMKEHYQRGGLG
                     DVKTKRYLLDILERELGPIRERRIEFAQDMGQVYAMLEAGSQKARQVAATTLDQVKSA
                     MGINYFK"
     misc_binding    complement(8092..8298)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            8400..9272
                     /locus_tag="U1021_001567"
     CDS             8400..9272
                     /locus_tag="U1021_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM4712091.1"
                     /translation="MKERIKDFISVTLGSIVMAIGFNSFFLENNIVSGGVGGLAIALN
                     ALLGWSPSDFVLYCNIPLLIICWFFLGKSVFIKTVYGAIIYPLCIKLTAGLPNLTENP
                     LLAAIFGGIILGFGLGLVFLGNSSTGGTGILIQFIHKYTPLSLGLTMAIIDGIIVGLG
                     FVAFDTDTVMYSIIALMTITYIVNRMMSGSQSSRNVMIISQKSEEIKNYITKVADRGV
                     TELPIIGGFTGVDKRMLMTTISIPEMQKLESAILDIDETAFMVVMPASQVRGRGFSLQ
                     KDHKHYDEDILIPM"
     gene            9337..10959
                     /locus_tag="U1021_001568"
     CDS             9337..10959
                     /locus_tag="U1021_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM4712092.1"
                     /translation="MLTVSDVSLRFSDRKLFDDVNIKFTAGNTYGLIGANGAGKSTFL
                     KILAGDIEPSTGHISLGPDERLSVLRQNHFDYEDERVIDVVIMGNEQLYSIMKEKDAI
                     YMKEDFSDEDGVRAAELEGEFAELGGWEAESEASQLLQNLNISEDLHYQNMSELTNGE
                     KVKVLLAKALFGKPDVLLLDEPTNGLDIQSINWLEDFLIDFENTVIVVSHDRHFLNKV
                     CTHMADLDFGKIKIFVGNYDFWKQSSELAAKLQADRNAKAEEKIKELQEFVARFSANA
                     SKSKQATSRKKMLDKIELEEIIPSSRKYPFINFKSEREIGNDLLTVENLKVVIDGETI
                     LDNISFILRPGDKTALIGQNDIQTTALIRALMGDIEYEGTVKWGVTTSQSYLPKDNTR
                     DFDTNESILDWLRQFASKEEDDNTFLRGFLGRMLFSGDEVNKPVNVLSGGEKVRVMLS
                     KLMLLKSNVLVLDDPTNHLDLESISSLNDGLKAFKESIIFASHDHEFIQTLANHIIVI
                     SKNGVIDRIDETYDEFLENAEVQAKVQELWKA"
BASE COUNT         3430 a         2312 c         2068 g         3279 t
ORIGIN      
        1 ttctgctacg atactgctca atgtatacgg ctctttccgt ccgtccatgt aaactaattc
       61 cattgcttgc tcctttctaa tcttccatca gttcggcgat tctgtaagtt ttcgctaggc
      121 ctactttaat atctgccatg gtggtcatac tatgcagctc tgaaagtcgg ttcttgatgt
      181 atgccatgtc agaattcaac tcgatagctg gctgggttgg ttggtctgat aagtctagta
      241 aaatctgtgt agcttcttgc aactgttggc cctgctccca gaaataattg atatactttg
      301 ctgtaaaaac tgcgcctttt tgacctgtca ttttgtgctg gataaactca caaccttttt
      361 tagtgatcat atagcaagga ttttctttgc cattgcttgc ggtgtaagtc gtttcttgcc
      421 aaaaatcagt acagcgcaaa tctgcgctct tcaaatactc tgtgtattgt cggatatcac
      481 gcatcaattc tttatgttgc ttacctgtcc attctgcaac tgttcggctg tcaattccca
      541 caatgtccgt ttgggttccc tgtgatgtga ttggtgtcat tggttggttc tcctttttgt
      601 aatttaagat aaagcggttc agtttgtcct tagtagcctg ttggggtttt cgctctcctc
      661 gcctaatagc ttgaatagtt tcctcagcca ttccaaccat tcgggcaacc tgtgcgccac
      721 tcggtccata agtgttacaa aaatcattta aatagttact gtagtttctc ctcatcgcct
      781 gtccctttct tattcctctg gcgttagtag ttcatcaatt gtcactccca aatagtttgc
      841 gactttttga agtgtttcaa tatctggctt cttggtacgt tcgtagtaca aagctatcaa
      901 agtgcttttt gaaatgcctg tagctttgtg aacgtcagaa acctttttgc gttgcttagc
      961 tagcaataca cgcatattgt tcttcatagt tttagacctc ctttttttga aatatggaaa
     1021 aaatgaagcg ttaacgctaa atttatgctt ttaattatac actatatttt tattgtgtca
     1081 agtaaaaaaa taaaaaaact tgaaaaaaaa tagcgtataa gctaaaatga tttcaaggag
     1141 ggatttatta tgcttcgtaa taatttagca aagttaatga ttgacagagg tatttctgca
     1201 actcaattat ttaatgatac tggtatagca cgttctacaa tttcaaaaat ttcaaataat
     1261 aatactgata aaatcagttt acaaactata gataagatat gtaattatct agaggtaact
     1321 ccagaagatt tttttgattt ttgggcttat gaggtgaaaa tacaatgtgg atttgtcaat
     1381 tatgattcac ttgctgaggt aagaaaagaa tgggaaccga ttccagattt taatgaacct
     1441 gcttttttat tgattgaatt tacaagagga aaaaacacaa aaaaaatcct tgaatacaaa
     1501 tttaactact gtgaagaata cgaaccaggt ataccatata acaatggtta tttagattct
     1561 ataattcttg aaagtccaga aactgaaacc agtatttttg acaatatgcc tattcagttt
     1621 caaaatgaat tgatagaaga agtaaaaaaa gcattgtcgg aaacttttga tgttttatca
     1681 ttttcgccaa ccttaagaga tttagattta tttactttaa gtggggtaaa ataaccacaa
     1741 gccctctcac cacgttcaaa cactcctctg gtacatttac cctactgaac tattccacgc
     1801 gcctaggggc tttctagtgg actgtgtgga gtgaaaaaag tcacggttag tcactagatg
     1861 aaaaaagtcg gattttgtcg attgctgaaa aaactcaaca aaactcaata gctaaaaaag
     1921 ttagcttttg ttaatagcta aaaaaagtca agttttttca agttggatat tttagcaacc
     1981 tcaataaacc tcaacttcta tattagttgt atgttagcat ttgttagcat tcggcgcgtg
     2041 ttgaactcta aaacgttatc ttttgcaacc ctatcaaaac gctccaaatt cgcctgtatc
     2101 ggcttctagc tctcttctgg tatatttacc ctacccactc caaacaaacg aaaataaggg
     2161 ctattctcgt aagcctacgc atgatataaa ccaactcaat ctaaaaccct tttaataaca
     2221 gcttgcctgc tgatggaaag gtttatgatc atgaaaataa ctgaggtaaa aaagaaagat
     2281 ggtagcattg tctaccgtgc cagtgtttat ctaggaatag atgccatcac tggtaagaaa
     2341 gtcaagacta atgtcacggg caggaccaag aaggaggtta aaaacaaaac tcagcaagct
     2401 attgcaactt ttaaaacaga cggggcaaca cgctaccaaa gcgccaccat aaccagttac
     2461 aaagagttgg cagaattgtg gtggagtagc tataagcaca cagtaaagcc aaatacccgt
     2521 gggaacatca ggggcttact gaaaaatcat gttataccac ttttcggagc ttataagctc
     2581 gataaactga cgaccccact cctccaaagt atcgtcatca aattagcaga caaagcaaat
     2641 acaggggaag ctggtgccta tctgcactat gacaaaatcc acgcgctgaa caaacgtata
     2701 ttgcaatacg gtgttgttat gcaagttctg ccatacaatc cagctcggga agtcatattg
     2761 cccaggaacg caaaaaaagc cactcggaag aaggtaaaac atttcaacga cgagcagctt
     2821 aaacagtttc ttggctactt ggacggctta gacttaacca attacagaaa tctgtatgaa
     2881 gccaccctat acaagttctt gctggccact ggttgccgta tcaatgaagc cctagcgctt
     2941 agctggtcag atattgactt gaacaacgcc accattaaca tcacaaaaac actcaaccgc
     3001 tacggctcaa taaactcccc aaaatcaaac gctagcatac gcgatataga catcgatagc
     3061 cagacagtag ccatgctgaa agaatacaga cggcgacaga tacaagaggc ttggaccctc
     3121 ggacgttctg aaacggtagt attttccgac tttatccatg actatcctga ggataagacc
     3181 ttaggaaata ggctgacaac acgcctcaag aatattgggc tgcctaatat cggttttcat
     3241 ggcttccgcc acacccacgc tagtctactg ctaaactctg gaatacccta caaggaactc
     3301 cagcatcgtc ttggtcattc tagaatatca atgacaatgg acatctatag ccacctctca
     3361 aaagagaatg caaaaaacgc tgttgcattt tacgaaaaag ctctcgggaa tctttgaggg
     3421 tgtacaaaaa ggggaacaaa ttcggtttac aagggtttac accactgtaa aacaccttga
     3481 tacgactgga tttttagcac gttaaacaca aatcatacca ttttgtgata taatattctg
     3541 taacgaggtg acttatggaa tttaaattat ttgatgacta catcacatta caagcattgt
     3601 taaaaacgac tggtattctc tattcaggag gtgccattaa aggtttctta gaagaaaata
     3661 ccattctttt caatggagag gatgaaaaaa gacgcggtaa aaaaatccgt gtcggagatg
     3721 ttatcacact cccagaccac aacaccagca tcacaatcgt cgctcctagt gcagaggaaa
     3781 tcaaacagca ccaagaggat caagctgaaa aagaacgtgt ggctgcaatc gttaaaaagt
     3841 taaatcaaga aaataaaaat aataagaaac aggtaaaaac tcctaaaaaa gcaactaaaa
     3901 agactgaaag aaaacctgtt cgtttccctg gtatgtagac atgtggctag aacgattaga
     3961 gttacaacat tttcgcaatt acaaccaatt agatattgag ttccacaaag ggctcaatgt
     4021 ctttttaggc gaaaacgccc aaggaaaaac caatattcta gaatctatct atgttttagc
     4081 cttaacacga agtcatcgaa cacggacaga taaggaccta ctacagtttc aagaaaagga
     4141 attatctatt tctggtttac tccatcgcac aagcggtaaa gttccccttg acattcactt
     4201 gacagacaag ggacgagtga ccaaggtcaa ccatctcaaa caagccaagc tttccaacta
     4261 tatcggccac atgaatgttg ttctcttcgc ccctgaagat ttacagctga taaaaggtgc
     4321 gcctgctttg agaagaaagt tcatcgatgt cgagctcggg caaatcaagc cactctatct
     4381 ctctgaccta tcgaattata accacgtttt aaaacaaaga aatacttacc tcaaatctac
     4441 agataagatt gatgagaact tcctatctgt gttagatcag caacttgctg aatatggtag
     4501 tcgtgttatc caacatcgta ttgactttct aaagaaatta gaggaattcg gaaatagaaa
     4561 agttcaagaa atatctggca atcgggaaga attgacaatc gaataccaga cctcaatcga
     4621 attgacagat gatgtcaatt taattgacaa attcttgacg gaactagaaa agtctcgtaa
     4681 acgtgattta tttaagaaaa atacaggagt tggaccacat cgagatgatg tagctttctt
     4741 tataaatgga atgaatgccc attatgctag ccaaggtcag caccgcagtc tcgttctgtc
     4801 actcaaacta gctgaaattg agctgatgaa agaagtcaca cgagagtacc caattctact
     4861 cttagatgat gttatgagtg agctggataa taatcgtcaa atcaaactat tagaaactat
     4921 tacagatacg attcaaacat ttattacaac gacatcttta gaccatttac ataagctacc
     4981 tgatagttta aaaatcttcc atattgagtc tggtaaggtt actgagtcag aataagattg
     5041 tttacactat cgtcaataaa gtttacaaaa aagtaaagac cctgtcaaga gggtcttgca
     5101 gaacgtagac aaactcctaa aaatataaaa aattgaagaa gtttgcgaaa gatagcaagt
     5161 tattaaactc ttagaaatat tgatatttcg gcgtttctga gagttttttt attttcaata
     5221 taaagaaaaa aagattgaag aaaattgtcc aaaatggact ttttcttcaa tctgaaagac
     5281 cctgccaaga gggtcttgtt tttgttttac tgaactgaat agtttggagc ttcgtttgtg
     5341 atttgaacat cgtgtggatg gctttctttc aaaccagcac ctgacatttc gatgaattgt
     5401 gcattttcat gcaattcagt caagttacca gcacctacat agcccatacc tgagcgaagt
     5461 ccaccaacca tttggaaaat catatctgca acagaacctt tataggctac acgtccttca
     5521 attccttctg gaacaagttt gttggcttca ttgacagatg cttggaagta acggtctttt
     5581 gaaccttgtt tcatggcagc gatagagccc ataccacgat aggtcttgaa cttacgacct
     5641 tggaagattt ctgtctcacc tggtgcttca tcagttcctg caaacataga accaagcata
     5701 acggcatgac caccagcggc aagtgccttg acaatatctc ctgaatactt gataccacca
     5761 tcagcgataa tcgttttacc atattcacgc gcaacaccag cggcatcata gatagctgtc
     5821 acttgtggta caccgacacc tgcgatgaca cgtgttgtac agattgaacc cggtccaata
     5881 ccgaccttca caacatcaac accagcttca taaagagcgc gagctccttc agctgtggca
     5941 atgttgccgg caatcaaggt acgagttggg aagtgttcgc ggatttcttt gatcttacgc
     6001 aaaacaccag ctgaatgacc atgagctgta tcgatgacaa tcgcatctgc acctgcttca
     6061 aagagagctt ctgcacgttc aaaagtatca gatgtaacac caacagcacc cgcaaccaag
     6121 agacgaccaa attcatcctt cgcagcattt gggaactcaa tcactttctc aatatctttg
     6181 atagtaatca agcctgacaa acgaccattt tcatcaacca atggcaattt ttcaatacga
     6241 tgcttgtgaa gaatagcctc cgcagtcgca agatctgttc caactggcgc tgttaccaaa
     6301 gcatcgctgg tcatgttggt cgaaattggc tgtgagtaat ctgaaatgaa acgcatatcg
     6361 cgattggtga taataccgac caacttacga ttttctaatg tttcaacgat tggcacaccg
     6421 gaaatacgat aagtagccat caatttctca gcttcagcaa tggtgtgttc tggtgttaag
     6481 aagaatggat cgataatgac tccattttca gaacgtttta ccttgcgcac ctcatcagcc
     6541 tgctccgcga tagacatgtt cttatggatg acgcccaaac cacccgcacg cgccatagcg
     6601 atagccattt tgctatctgt tactgtatcc atagcagcag aaataatcgg aagattaagg
     6661 gtcaaatttg gtgctaattg tgtttttaaa tcaatatcat gtggtaatac atgactttca
     6721 gccggaataa gtaatacatc gtcgaaagta aagccttttt tcaaaaattt agtgtcccag
     6781 tttgacattt tcttcctctt ttcttattta atatgtagca tgattgctat ttgtatttta
     6841 attatgataa cattttgaaa tcatttgtca atcattattc gctttaatat catcattact
     6901 aaaaattcag aaaattctat tcagttttat atataaaatt cgaacgtttg ttttttgcta
     6961 cgtcgtaaaa taaatgaaaa aagcaacatt ttctcaacat tgctctttca ttgttaacct
     7021 tatttaaaat agttaattcc catagcagat ttcacttggt caagagttgt cgcagcaact
     7081 tggcgagctt tttggctacc tgcctccaac attgcataga cctgtcccat atcctgtgca
     7141 aattcgatac gacgctcacg gattggtcct aattctctct ctaaaatgtc cagcaaataa
     7201 cgtttggtct tcacatcgcc caaaccacca cgttgatagt gctccttcat agcctcaatc
     7261 tcagccttat cttcttcgcg accaaaaacg tcaagatagt ggaaaaccat gtttccttca
     7321 atcttacctg ggtcttcaac acggatgtgg ttgggatcag tgtacatgga catgactttc
     7381 ttcttgagtg tatccatgtc atctgccaga taaataccat ttccaagtga cttagacatc
     7441 ttggcattgc cgtccaaacc tggcaagcga ccagctgcct cattttcagg ataaatgccc
     7501 tccggctcta ccaaaatatc agtctggtaa gcatggttaa agctacgaac gatttcacga
     7561 gtctgctcaa tcataggttt ctggtcattt cctactggaa caaagtttgc cttgaaggct
     7621 gtaatatccg ccgcttgtga cacaggatag accaagaaac cagctggaat tccttcgcca
     7681 aatcccttct gagcaatctc ggtttttaca gtcggattgc gttctagacg tgcaacagat
     7741 accaagttca tgtagtacat ggtcaactct gccaattcag gaatttgact ctggatgaaa
     7801 atcgttgtct tagctggatc aagtcctgcc gctagataat ctagtgctac gtttccaacg
     7861 gattcaacaa tcttttgcgg ttcctttgca tgatctgtca acgcttgttg gtctgctaaa
     7921 aagacaaaaa gttcatgttg acctgcatcc tgtaataaaa cacgattttt caacgaacca
     7981 acataatgtc caatatgtaa tttgcctgtt ggacggtctc ctgttaggat aatcggttta
     8041 ctcataaaat gttctccttt tacataataa aagcccacgc acagaaaact gtgcgagggc
     8101 gtcaaggaca cggtgccacc tcacttataa gcattaaata agcttacatc tttttgcaca
     8161 taaggcctgc tagccgaatc cttatttatt cagattctat tcactcagtc cattcataag
     8221 cgactcttgt ttgttcacac caaccacaaa ctctctaaaa attatccact tactactctt
     8281 ctgattgatt cctattataa ccgcaaaaaa ttagaaagtc aagctgacaa agccttgacg
     8341 atactgtcta aattagggat aatagaaatt gcttttataa cactaaccaa ggagaatata
     8401 tgaaagaacg tataaaggac tttatctctg tcacactcgg atcaattgtc atggccattg
     8461 gatttaacag tttttttcta gagaataata tcgtatctgg tggtgtcgga ggtttagcaa
     8521 tcgcactcaa tgctcttctg gggtggagtc cgtctgattt tgtcctctac tgtaacatcc
     8581 ctttattaat catctgttgg tttttcttag gaaaatctgt atttatcaaa actgtctatg
     8641 gagctattat ctaccctctt tgcatcaagt tgacagcagg tttacccaac ttgacagaaa
     8701 atcctctcct agctgctatt ttcggtggaa ttatcctagg ttttggactt gggcttgtct
     8761 tccttggaaa ttcttctact ggtggaacag gtattcttat tcaatttatt cacaagtaca
     8821 cccctttatc attaggtctg acaatggcta ttattgatgg cattatcgtt ggacttggat
     8881 ttgttgcctt cgatactgat acagttatgt actcaattat tgccctaatg accattactt
     8941 atattgtcaa ccgcatgatg tctggttccc aatcgtctcg aaatgtcatg attatttctc
     9001 aaaaatcaga agaaatcaaa aactatatca ctaaagttgc tgatcgcgga gtgactgaac
     9061 ttccaataat cggtggcttt acaggggttg acaagcgtat gttgatgact actatctcta
     9121 ttcctgaaat gcaaaaactg gaatctgcta ttctagatat cgatgaaaca gcttttatgg
     9181 tagtcatgcc tgccagccaa gttcgtggtc gtggcttcag tcttcaaaaa gaccataaac
     9241 attatgatga agatattttg attccaatgt aattcattga aaattcaagt tctttctagt
     9301 acaataaaac taatagacag aaatagagga gaaactatgc ttacagtatc agacgtgtcg
     9361 cttcgcttta gcgatcgcaa attatttgac gatgtcaata tcaaatttac agcaggaaat
     9421 acctacggtt tgattggtgc aaacggggcc ggtaaatcta catttttgaa aattcttgct
     9481 ggtgacatcg agccatcaac aggtcatatt tcacttggac cagacgaacg cctttctgta
     9541 ctacgtcaga accatttcga ctatgaagac gaacgcgtca ttgacgtagt tatcatgggg
     9601 aatgagcaac tttacagcat catgaaagaa aaagatgcta tttacatgaa ggaagatttt
     9661 tctgatgaag atggtgttcg tgctgctgaa ttagaaggtg agtttgctga acttggtggc
     9721 tgggaagctg aaagtgaagc ttctcaattg ctccaaaacc tcaacatttc agaagacctc
     9781 cactaccaaa acatgagcga attgaccaac ggtgagaagg ttaaggtcct cttggctaag
     9841 gcactttttg gtaaaccaga tgttcttctt ttggacgagc caaccaacgg tctggacatc
     9901 caatctatca actggctcga agatttcttg attgactttg aaaatacggt tatcgtcgtg
     9961 tcacacgacc gccacttctt aaacaaagta tgtacccata tggccgacct tgacttcggt
    10021 aaaatcaaga ttttcgttgg taactatgac ttctggaaac aatctagcga actagcagct
    10081 aaactacaag ctgaccgtaa tgcaaaagca gaagaaaaaa tcaaagaact acaagaattc
    10141 gttgcccgtt tctctgctaa tgcttctaag tctaagcaag ctacttcacg taagaaaatg
    10201 ttggacaaaa tcgagttgga agaaatcatt ccttctagcc gtaagtatcc atttatcaac
    10261 ttcaaatcag aacgtgaaat cggtaatgac ctcttaacag ttgaaaactt gaaagttgtt
    10321 attgatggtg aaacgattct tgacaatatc agctttatcc tgcgcccagg tgacaagact
    10381 gctcttattg gtcaaaacga catccaaaca actgctctca ttcgtgctct tatgggcgat
    10441 attgaatatg aaggtactgt caagtggggt gtcactacta gtcaatccta cttaccaaaa
    10501 gacaatactc gtgactttga tacaaacgaa tctatccttg attggctccg tcaatttgcc
    10561 agcaaggaag aagatgacaa taccttcttg cgcggtttct tgggacgtat gctcttctcg
    10621 ggtgatgagg ttaacaaacc tgtaaacgtc ttgtcagggg gcgaaaaagt gcgcgtgatg
    10681 ttgtcaaaac tcatgctcct caagtcaaat gtcttggtct tagatgatcc aaccaaccac
    10741 ttggacttgg aatcaatttc cagtctgaac gatggtttga aagcttttaa agagtccatc
    10801 atctttgcca gccatgacca cgaatttatt caaactttag caaaccatat catcgtcatt
    10861 tctaaaaacg gtgttatcga ccgaatcgac gaaacttatg atgaattctt ggaaaatgct
    10921 gaagtacaag caaaagtaca agaactttgg aaagcataat aaaaagaggc tgggactttt
    10981 gcccagcctc tcttctcaga gttcgtgtca acatctcagc gcagtggttg attgccagat
    11041 ttgttcgtgt ttcacactcc aaatctggcc attacgactg ttgcgaaca
//
LOCUS       DASFQD010000080        10965 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.081, whole genome shotgun sequence.
ACCESSION   DASFQD010000080 DASFQD010000000
VERSION     DASFQD010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 10965)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10965)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10965
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.081"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(89..937)
                     /locus_tag="U1021_001569"
     CDS             complement(89..937)
                     /locus_tag="U1021_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEM4712093.1"
                     /translation="MTSGTADLKRFAKEIRYHTLATLNQLGFGHYGGSLSIVEVLAAL
                     YGEILDIRVQNFSSKERDHFILSKGHAGPALYSTLYLKGFFDRDFLLSLNQNGTHLPS
                     HPDRNLTPGVDMTTGSLGQGMSVATGVAYGKKIEQSSYYTYTLVGDGELNEGQCWEAA
                     QFAAHHELSKLILFVDDNKKQLDGRTHDICQTFDFVEKFQAFGWESVRVNGADIDAII
                     NAILTMKSSKSPQPKCIVLDTTKGQGVTFLEELESNHHLRLSGQLREDLEQVTLVLAR
                     ELEVTK"
     gene            complement(939..2285)
                     /locus_tag="U1021_001570"
     CDS             complement(939..2285)
                     /locus_tag="U1021_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HEM4712094.1"
                     /translation="MILDFLIDIAKTPAILVALIAILGLALQKKPAADLIKGGLKTFV
                     GFIVVGGGANIIVGSLEPFGQMFEQAFNLKGVVPNNEAIVAMALDKYGTATSLIMLLG
                     MVFNIAIARFTRFKYIFLTGHHTLYMACMIAVIMSVAGFTSVGLIVMGGLALGLIMTL
                     SPAFVQKYMIQLTGNDHVALGHFSALGYWLSGVVGGLVGDKSKSTEDINFPKGLAFLR
                     DSTVSIAISMSLIYMIVALFAGGDYIKENLSGGTNSMIYALTLGGTFAAGVFVILSGV
                     RLILAEIVPAFKGISEKLVPNSKPALDCPVVYPYAPNAVLIGFISSFAGGIVSMIILA
                     LTGGVVILPGVVPHFFCGATAGVMGNASGGVRGAVCGAFMQGVLISFLPVFLLPVLGD
                     LGFAGSTFSDADFGLSGIFLGILAKNGGILTVSVGIFAVLALMLGLSLVKKEQKEG"
     gene            complement(2339..2623)
                     /locus_tag="U1021_001571"
     CDS             complement(2339..2623)
                     /locus_tag="U1021_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016397350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM4712095.1"
                     /translation="MLRIGTACGSGLGSSFMVQMNIESILRDLGVSDVHVEHYDLGGA
                     NPSEADVWIVGRDLADSATHLGDVRILNSIIDMNELRELVTAICQEKGLV"
     gene            complement(2625..4667)
                     /locus_tag="U1021_001572"
     CDS             complement(2625..4667)
                     /locus_tag="U1021_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM4712096.1"
                     /translation="MVDNRTMAILMELFATRKESLYELSIQTGIEKEQLHSNLELVNQ
                     LLQEHSFPQIQYKDSEFVISTELYNQKESVFSLFRNRQIYLSQEERQLLIYLYTFIRK
                     EFVSNVHYQELLSVSRNTTLTDIKNVKELCLDFQVRLEYTRAKGYHLIGREEDKHRLA
                     LYALSNCLQSSVGVWALDYILKSWGEENPIEELKIVSQQACNYYKVSALEERLDEYLY
                     FLIFLFIRQARVGNLINWNFEGKGGVVKDFLQRLWKLLRLKSTSTLELNAATQEYLSH
                     LLQGCLEGEGGEKDDLFYHLTVEIVEEMERLSLIAFEHRSEMIEGLQRHLIPAYYRLT
                     SRLVNVNSYTETIKEEHADLFYLVKKALRPLEEHLGFTIPDSEVSYFVIHFGGYIEAG
                     QQRSYRYRALVVCPNGVSSSLIVKENLRQLFPNIYFADTHSLQDWKMLDMTDYDMVFG
                     TIKLDIELPFFLVSQLMTSNHKKELFHLVNQHFPNAAYFPIEIEQLLSLVGKHATIHQ
                     EQALKYELVQFLNQRSYEQRGRSPMLEELITKETFQWSEEVLDWQKAVALAARPLVDK
                     GAIETRYIDAMIAKVEEFGPFIDLGKGIAIPHARPEDGVNEVGMSMLVLDKPVYLLDD
                     PSHEIRLFICIAAVDNQTHLRALSHLTKILREEENIQQLVGAKEFTDVQHLLKEEQ"
     gene            complement(4988..5482)
                     /locus_tag="U1021_001573"
     CDS             complement(4988..5482)
                     /locus_tag="U1021_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF536 domain-containing protein"
                     /protein_id="HEM4712097.1"
                     /translation="MGIEKTVSELAEILGVSRQAMNNRVKSLPEEFVDKNDKGVTVVN
                     RAGLIKLEEIYKTTIFEDEPISDEVKHRELMEILVDEKNAEIIRLYSQLKAKDKQLAE
                     KDEQLKVKDVQIAEKDKQLDQQQQLTLKAMADKEVLKLELDEVKAQAEEVQAKGFFAR
                     LFGK"
     gene            complement(5652..7052)
                     /locus_tag="U1021_001574"
     CDS             complement(5652..7052)
                     /locus_tag="U1021_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM4712098.1"
                     /translation="MVTEQREYRFPEGFLWGSSTSGPQSEGSVAGDGKGWNNWDYWYS
                     QEPKLFHQQIGPEQTSTFYEHFQSDLDLLVETGHSIFRTSIQWSRLIPEGIGEVNPQA
                     VEFYRAVFAGIRERGIKLLVNLYHFDLPYVLQEKGGWENKEIVWAYEAYARQCFSLFG
                     DLVDHWITFNEPIVPVECGYLGSYHYPCKVDAKAAVVVAYHTQLASSLAVRACHQLHP
                     DHKISIVLNLTPAYPRSQSPEDLQAARIAELFQTRSFLDPSVLGQYPRELVDILEKHG
                     LRPETTEEELTIIKENRVDFLGVNYYQPLRVQTPSEDGWNGEATFLSQYFQPYDKPDK
                     KINPHRGWEIYEEGLYDIAKNIQENYGNIEWLVTENGMGVEGEDVFEENGMIQDDYRI
                     HFMEDHLIQLHRGIDEGANCKGYMVWTFIDCWSWLNAYKNRYGLVSLDLQTQKRTVKK
                     SGYWFKQVSAKNGFIR"
     gene            7290..8462
                     /locus_tag="U1021_001575"
     CDS             7290..8462
                     /locus_tag="U1021_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015632253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM4712099.1"
                     /translation="MNTVDTIIIGAGPAGMMAAISSSFYGKKTLLLEKNKRLGKKLSG
                     TGGGRCNVTNNGTLEDLLAGIPGNGRFLYSVFSQFDNHDTMNFFQENGVKLKVEDHGR
                     VFPTTDRSQTIIKCLEMKMLENGVNIRTGTEVVSVRKIDDLFHVKTSEETFTAPQLIV
                     TTGGKTYPSTGSTGFGHDIARHFKLEVTEIEAAESPVLTDFPHKKLQGISLDDVTLTY
                     GKHVITHDLLFTHFGLSGPAALRLSSFVKGGETAFLDALPTHSDQDLFEHLEANREKS
                     VKNALRELMPDRLADFFAENYDCKVKQVSQKDLTDLVSLLKALPIKITGKMSLAKSFV
                     TKGGVDLKEINPKTLESKKVPGLHFAGEVLDINAHTGGFNITYCLATGWVAGSLHY"
     gene            8556..9254
                     /locus_tag="U1021_001576"
     CDS             8556..9254
                     /locus_tag="U1021_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712100.1"
                     /translation="MQLKLSSISKKFDHKIILEDANFQFEQGKIYGLLGRNGAGKTTL
                     FNCIARNLTLDNGSIQFVKGEETLDYDNTDIGFTQTYPQLPAFMTAYEFVRFYMDIHK
                     DKLKSPRSPEEWLNLVGIGEEDQHRLLKDFSHGMQNKVQLLLSLIVQPPVLLLDEPLT
                     SFDPVAAHEFKQLIREAKKDSVIIFSTHILQLAQDLCDEIVLLHHQKLQAVPSEKLHD
                     PDFEQEIVALLTAD"
     gene            9264..10886
                     /locus_tag="U1021_001577"
     CDS             9264..10886
                     /locus_tag="U1021_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712101.1"
                     /translation="MKTILRYSWYQEKYNLHRSVNGLFYYLRKLPLVGKCIPESIFKS
                     YSFKSSLFLVLHILSIPSRFLIKGFWLLFHFYHASFWMNMLVNGELTFWKILPNTWLL
                     GFMFWLLFVGLSYRLGKSLDPVISKADREFMQNFSLSQSSFLQSQLFIEPILTTIYYL
                     PALTIFCMITKEWLVFPIGLMTVLAGHLAGHALNRLLFEHRIFSRHNSWHAWLWIAFV
                     FVLYVLVIVFRNQLSLGMLVPILLVQPFLIWFSYGYLKQQTNHLDYLSYCMDESLQMD
                     KKLFEMTKGNEYTRQGLQMQAKLNAKTGKDLSHLSGMTYLNALLFDRYKKVLYKKVQN
                     WVLAVVVILAALEGIRYFLDPFTFTEAYLLQFLPLSFMIMYVASSGKVVAQMVFVNCD
                     ISMLHYPFYREAKTIIAGFNYRFLQTCKLNLIFATSLFLAIMVLGRFAFSLETILLTA
                     LLLISLTALFSFHDLFIYYILQPFTNDMDVVNPLYKFLSGALYWVAYLNTRINVGSHT
                     YILLVSLAMIAYVSIGYWILLKKAPQTFRLKA"
BASE COUNT         3141 a         2663 c         1978 g         3183 t
ORIGIN      
        1 tctgcctcaa tagctgctat ggttgtgtct tcctgcccta cctgagctag aaaatcacta
       61 taaaccagtc gcatctcctt tgtctgtctc atttcgtcac ctccaactct ctcgctaaaa
      121 caagagttac ttgctctaaa tcttcccgta attgacccga caaacgcaaa tggtgattgc
      181 tttctaattc ttctaagaag gtaactccct gccccttagt agtatcaaga acgatacatt
      241 ttggttgtgg agacttactt gacttcattg ttagaatagc atttataata gcatctatat
      301 cggccccatt cacacgcact gattcccaac caaaagcctg aaatttttca acaaaatcaa
      361 aggtttggca aatatcatgg gtacgaccgt ctagttgttt tttattgtca tccacaaaca
      421 gaatcagttt cgatagttcg tggtgggctg caaactgagc tgcttcccag cattgacctt
      481 cattcaattc cccgtcccct accaatgtgt aggtatagta tgaggactgt tcaattttct
      541 taccgtatgc taccccagta gcgacactca tcccttgccc caacgaacct gttgtcatat
      601 ccacccctgg cgttaagttt cggtcagggt gtgaaggcaa atgtgttcca ttttgattta
      661 gcgacaagag aaaatctcta tcaaagaagc ctttcaaata caacgtacta taaagtgctg
      721 gacctgcatg ccccttggac agaataaagt gatctcgctc cttagaagag aaattctgga
      781 cacgaatgtc cagaatttct ccatatagag cagccaacac ttctacgatt gataagctac
      841 caccataatg accaaatcct aattgattca aagtcgccaa ggtatggtag cgaatttctt
      901 tggcaaatcg tttcaaatca gctgtaccac tagtcatatt atccttcttt ctgttctttt
      961 ttcaccaatg acaatccaag catcaaggcc aataccgcaa aaataccaac agaaactgtg
     1021 agaataccgc catttttagc aagaattccc aagaaaatac ctgatagacc aaaatctgca
     1081 tctgagaatg ttgaacctgc aaaaccaagg tctcccaaaa caggaagtaa gaatacaggt
     1141 aagaaactaa tgagaacccc ttgcataaaa gcaccacaaa ctgcgccacg aacaccacct
     1201 gacgcatttc ccatgacccc tgcagtagct ccgcagaaga aatgtggtac gacacctgga
     1261 aggataacga caccgccagt caaggcaaga ataatcatgc tgacaatacc acctgcaaaa
     1321 ctagagataa agccaatcaa cacggcgttt ggtgcataag gataaacaac tggacagtct
     1381 agggctggtt tggaattcgg aaccaacttc tctgaaattc ctttgaaggc tggaacaatt
     1441 tccgccaaaa ttaagcgtac accagataag ataacaaaaa cacctgctgc aaaagttcca
     1501 cctagggtca aggcataaat catactgtta gtaccaccac taaggttttc cttaatataa
     1561 tcaccgcctg caaacaaagc cacaatcatg taaatcaagg acatagaaat ggcaatgctg
     1621 acagttgaat cacgcaagaa tgccaaacct ttaggaaaat taatatcctc agtagactta
     1681 gacttatcac cgaccaaacc gcctactaca ccactcaacc agtaaccaag tgcactgaag
     1741 tgacctaggg cgacatgatc atttcctgtc aattgaatca tgtatttttg aacgaaggct
     1801 ggggagagtg tcataatcag acctaaagcc aacccaccca tcacaattag gccgacagaa
     1861 gtgaatcctg caacactcat gataactgca atcatacagg ccatatatag tgtgtggtgt
     1921 cctgtcaaga aaatatattt aaagcgtgta aagcgagcaa tagcaatatt gaagaccatt
     1981 ccaagcaaca taatcaagga tgtagcagtt ccatacttat ccaaagccat cgctacaata
     2041 gcttcattat ttggaacaac ccctttcaag ttgaaagctt gttcaaacat ttgaccaaat
     2101 ggctcaagcg agccaacaat aatattcgct ccgccaccaa caacaataaa accaacaaaa
     2161 gttttcaagc cccccttaat taaatctgct gcgggctttt tctgtaaggc taaacctaga
     2221 atagcaatga gagcaaccag aattgccgga gttttagcaa tatcaatgag aaaatccaat
     2281 atcattttct gtctccttta taattttatc tttgcgggtc atcccctgtg tatacaattt
     2341 aaaccaaacc tttttcttga cagatagccg tgacaagttc cctcaactca ttcatatcaa
     2401 taatactatt caatattcga acatctccta aatgagttgc agaatcagcc aggtcacgtc
     2461 cgacaatcca cacatctgct tcactcggat tagcaccacc tagatcataa tgctccacat
     2521 gaacatctga tacacctaaa tctcgcaaaa tggattcaat attcatttga accataaagc
     2581 tagagcctaa acctgaacca caggctgttc caattcgtaa catattactg ttcctccttt
     2641 aataaatgtt gtacgtcggt aaattctttg gcgccgacaa gttgttgaat attttcttct
     2701 tctcgcaaaa tttttgtcaa atgcgagagt gctctgagat gggtttgatt atctacggct
     2761 gcaatacaaa tgaacagccg aatttcatga ctagggtcat ccaatagata aactggctta
     2821 tccaatacca acattgacat ccctacctca ttaaccccat cttctggtcg tgcatgtgga
     2881 atcgcaattc ctttacctag gtcaataaat ggaccaaact cttctacctt cgctatcata
     2941 gcatcaatat atcgagtttc tatagctcct ttatctacca gaggtcgtgc agccagggca
     3001 actgcttttt gccagtctaa aacttcctca gaccattgaa aggtctcttt tgtaatcaat
     3061 tcttctaaca taggactcct tcccctttgc tcataggagc gctgattgag aaactgcacc
     3121 aattcatatt ttaaagcctg ctcctgatga atggttgcat gtttcccaac aagtgataat
     3181 aactgctcaa tctcaatcgg aaaataagcc gcatttggga aatgctgatt aaccaaatga
     3241 aataattctt ttttatgatt agaggtcatc agctgggata ccaagaaaaa tggtagctct
     3301 atatccagct tgatagttcc aaataccatg tcatagtctg tcatgtctag catcttccaa
     3361 tcctgtaagg aatgggtatc ggcaaaatag atattaggaa atagttgccg tagattttct
     3421 tttacaatca gcgaagagct cactccattt gggcaaacaa ccaaggcccg ataacgatat
     3481 gaacgttgtt gacctgcttc gatgtagcca ccaaagtgga tgacaaaata agatacctca
     3541 ctatctggta tagtaaaacc tagatgctct tccaaaggtc gcaaagcttt ttttacaaga
     3601 tagaacaagt cagcatgctc ttctttgatg gtttcagtat atgaattgac atttaccaaa
     3661 cgagatgtta aacggtagta agcaggaatt aggtgacgtt gcaaaccttc aatcatttcc
     3721 gagcgatgtt caaaagcaat taaggacaaa cgttccatct cttccactat ttctacagtc
     3781 aagtggtaaa ataggtcatc cttttctccg ccctcacctt ctaagcatcc ttgcagtaaa
     3841 tgtgacagat actcttgtgt cgcagcattt aattctaatg tgctagtact ttttaaacgt
     3901 aataatttcc aaaggcgttg cagaaaatct tttacaaccc ctccctttcc ttcaaaattc
     3961 cagttaataa ggttaccaac acgcgcctga cggataaata aaaatatcaa aaaatacaaa
     4021 tattcatcca atctctcttc taaagctgag actttataat aattgcaagc ttgttgactc
     4081 actattttca attcttcaat aggattttcc tcaccccaag atttaagaat ataatccaaa
     4141 gcccacacac caaccgaaga ctgcaaacaa ttactgagtg cataaagtgc caagcgatgt
     4201 ttatcttctt ctcgaccaat tagatgatag cctttcgccc tcgtatattc caagcgtact
     4261 tgaaagtcca agcaaagttc ctttacattc ttaatatccg tcaatgttgt gttacggctc
     4321 acactcaata attcttggta gtgaacgttt gatacaaatt cttttcggat aaaggtataa
     4381 agatagataa gaagctgtct ttcttcttgc gaaagataga tctggcgatt gcgaaagagc
     4441 gaaaatacac tttctttttg attgtaaagc tccgtagaaa taacaaactc gctatctttg
     4501 tattgtatct gcgggaagga atgttcttgc aacaattgat tgactagttc caaattagaa
     4561 tgtagctgct ccttttcaat tcctgtttga atactaagtt cgtacaaact ttcttttcga
     4621 gtcgcaaaca attccatcag aatcgccatg gtacgattat caaccatatt ttcctccttg
     4681 tcttaattgt atcccttttc atttctgatt tctagagtct ttgagcccaa ttaacataat
     4741 aaaaaacaca aattcaattg tgctcactac ttaaactaaa aaagattggt tcccaccaat
     4801 ctttttatat cacatgtcat cttccatttt ttagtgcggg ctgaaacagt ctatccctag
     4861 actgtacctc gctttcttat ttccaagctc gggctgaaac agtctatccc cagactgttt
     4921 cactcccccg gacctttatt cgctctcttg ttttcaagct catgataaaa aggtcccccg
     4981 gaccttttta tttcccaaac aaacgtgcaa agaagccttt agcttgcact tcttctgcct
     5041 gtgctttaac ttcgtccaat tccaacttga gaacttcctt atcggccata gcttttagtg
     5101 tcaattgctg ttgctgatcc aactgtttat ccttctcagc aatctgcaca tctttaacct
     5161 tgagttgttc atctttttcg gcaagttgct tatctttggc ttttaattga ctatataagc
     5221 ggatgatttc agcatttttc tcgtcaacta aaatttccat caattcacga tgcttgactt
     5281 catcgctaat cggctcatct tcaaaaatgg ttgttttgta gatctcctcc aacttaatca
     5341 agccagcacg gtttacaacg gtcacaccct tgtcattttt atctacaaat tcttcaggaa
     5401 gtgatttgac gcgattattc atagcctgcc ggctcactcc taaaatttca gctaactcac
     5461 tgactgtttt ttcgattccc ataatatcct cggtacttac atttctcata gtttgtatca
     5521 ttaaaatatt accacagaac cctatccctg tcaaatctag gggaattttc ttaccaagca
     5581 ttagtggata atcacaaacc tcaaaagcat cttatctcaa tgcaatgtta tggagaaacg
     5641 aaatatacat tctatctaat aaaaccattt ttagcactca cttgcttgaa ccaatatcca
     5701 gattttttga cagtacgctt ctgagtttgg aggtcaagcg agaccaaacc gtatcggttt
     5761 ttataggcat ttaaccaaga ccagcagtca ataaaggtcc agaccatata gcccttacag
     5821 ttcgctcctt catcaatacc tcgatggagc tgaatcaaat gatcttccat gaagtgaatc
     5881 cgatagtcat cctgaatcat gccattttct tcaaaaacat cctccccttc aactcccatg
     5941 ccgttctccg ttaccaacca ttcgatattg ccatagtttt cctggatatt tttagcaatg
     6001 tcgtacagcc cttcttcata aatttcccag cctctatggg gattgatttt cttgtcaggc
     6061 ttatcataag gctggaaata ttgggatagg aaagtagctt ctccgttcca tccatcttct
     6121 gaaggagtct gcacgcgcag gggctggtaa taattcaccc ccaggaagtc aaccctattt
     6181 tctttgataa tggtcaattc ctcctctgtg gtttctggac gtaaaccgtg tttttcaaga
     6241 atgtcaacca gttccctcgg gtattgtccc aaaacagatg gatccaaaaa gcttctcgtt
     6301 tgaaatagct cagcaatccg tgctgcctgt aaatcttctg gactctgact tcttggatag
     6361 gcaggagtaa gattgagaac aatggaaatt ttgtggtctg ggtgtagttg gtgacaggcc
     6421 cgaacagcca aagaactagc cagttgagta tgataggcta cgaccacagc tgcctttgca
     6481 tccaccttgc aaggataatg atagcttcct agatagccac attctactgg aacaatgggt
     6541 tcattaaagg taatccaatg atccaccaga tctccaaaga gactgaaaca ctggcgagca
     6601 taagcctcat aggcccagac aatctcctta ttttcccagc cccctttttc ctgtaagaca
     6661 taaggcaaat cgaaatgata aagattgacc aaaagcttta tcccacgctc tcgaatacct
     6721 gcaaatacag ccctataaaa ctccacagct tgcggattga cctcgcctat cccttccgga
     6781 atcagacgtg accactgtat agaggtgcga aaaatactat gacctgtttc caccaacaaa
     6841 tccaaatctg actggaaatg ttcataaaaa gtcgatgttt gttccggtcc tatttgctgg
     6901 tgaaagagct taggttcctg actgtaccag taatcccagt tattccaccc ctttccatca
     6961 ccagctacgc ttccttcact ttgaggccct gaagtggagg agccccacaa aaaaccttct
     7021 ggaaaacgat actctctttg ctcagttacc attcttctac ctactttctt tcatgctaca
     7081 gacggagttg ttagaacctg gattcacaat gtagcttcca caaaattact ttgcttgtac
     7141 atacaggctc ctgataaaaa ctaatttccc ttagtctaag tatactcccc taacccgtca
     7201 atggtcttcc gcaatctcaa ggaaaaactc cacaaatcat agcaaagact caaactactt
     7261 tcttgataaa aatatgatac aataaaggca tgaatacagt agataccatt attataggag
     7321 cgggccctgc tggcatgatg gccgccattt cttccagctt ttacggcaag aaaaccctgc
     7381 ttcttgaaaa aaacaagcgt ctgggcaaga aactgtctgg cacaggcggc ggacgttgca
     7441 atgtgaccaa caacggcaca ctagaagacc tgctggctgg cattcctggc aacggccgct
     7501 ttctttacag cgtcttttcc cagtttgaca accatgacac catgaatttc tttcaggaaa
     7561 atggggtcaa gctcaaggtg gaggaccacg gccgtgtctt tccgaccacc gaccgctccc
     7621 agaccattat caagtgcttg gagatgaaaa tgttggaaaa cggcgtcaat atccgcacag
     7681 ggactgaggt ggtttccgtc cgtaagattg atgacctctt ccatgtcaag accagcgagg
     7741 aaacctttac ggcacctcag ctcattgtca ccaccggtgg caagacctat ccctccaccg
     7801 gctcgactgg ctttggtcac gacattgccc gccacttcaa gctggaagtc acggagattg
     7861 aagccgcaga aagccccgtt ctgaccgact tcccccacaa gaagctccaa ggcatttccc
     7921 tggacgacgt caccctgacc tacggcaagc acgtcatcac ccacgacctg ctctttaccc
     7981 actttggcct gtcagggccc gctgctcttc gcttgtccag ttttgtcaaa ggcggcgaaa
     8041 ctgcatttct cgatgctctg ccgacccatt ctgaccaaga tctgtttgag catttagaag
     8101 ccaacaggga aaaatccgtc aagaatgccc tacgagaact catgccagac cgcctagccg
     8161 actttttcgc ggagaactac gactgcaagg tcaaacaggt ctcccaaaaa gacctgactg
     8221 atctggtctc ccttctcaaa gccctaccga tcaagattac cggcaagatg tccttggcca
     8281 agtcctttgt gaccaaggga ggcgttgacc tcaaggaaat caatccaaaa acattagaga
     8341 gcaagaaggt cccaggcctc cactttgccg gtgaagtctt ggacatcaac gcccataccg
     8401 gcggctttaa catcacctac tgtcttgcaa ctggttgggt ggctggaagt ttacattatt
     8461 agtttttaca tcaaattcaa gcaaaatctg cttgaatttt tttgtttttt attgtatgat
     8521 aaaaccataa caatataaca aaaaggagat tggctatgca actgaaactt tcttctattt
     8581 ctaaaaaatt tgaccacaag attattctgg aggatgccaa ttttcaattt gaacaaggca
     8641 agatttacgg cttgctagga cggaacgggg ctggtaagac aaccttgttt aactgcattg
     8701 cccgtaatct gaccttggat aatggctcga ttcagtttgt gaaaggcgaa gaaactcttg
     8761 actacgataa tacggacatc ggctttaccc agacctatcc acaactacct gcctttatga
     8821 cagcctatga gtttgtccgc ttctatatgg acattcataa ggataaactc aaatctcctc
     8881 gcagtccaga agaatggcta aacttggtcg gtattggaga agaagaccag caccgtctgc
     8941 tcaaggattt ttcccacggt atgcagaaca aggtccagct actcctgtcc ctgattgtcc
     9001 agccacctgt ccttctctta gatgagccgc tgacttcctt tgaccctgtg gctgctcacg
     9061 agttcaaaca actaattcgg gaagctaaga aggattccgt cattatattt tccacccata
     9121 tcttacaact ggctcaggac ctctgcgacg agattgtttt gctccatcat cagaaattac
     9181 aggcagttcc aagcgaaaaa ctccatgatc ctgacttcga acaggaaata gttgccttgc
     9241 tgacagcaga ttaggagaaa cctatgaaaa caatattacg ttattcttgg tatcaggaaa
     9301 aatataacct ccatcggtca gtcaatggac tcttctacta tcttcggaaa ctgccgcttg
     9361 tgggaaagtg cattccagag agtattttca agtcttacag ctttaagtct agtctctttt
     9421 tggtcctgca catcttatcc atccccagtc gcttcctgat caagggcttc tggttgctct
     9481 ttcatttcta ccatgcttct ttctggatga atatgctagt caatggggag ctgacctttt
     9541 ggaaaattct cccaaacact tggctccttg gctttatgtt ctggcttttg tttgtcggac
     9601 taagctatcg tttggggaag agcttagacc ctgttatctc taaagcagat cgagaattta
     9661 tgcagaattt cagcctgtca caatccagct ttcttcaaag ccaacttttt atcgagccta
     9721 tcctgaccac tatttactac ctgccagcct taaccatttt ttgcatgata accaaggagt
     9781 ggttagtttt tcctattggt ttgatgacag tgctggcagg tcatctagct ggccatgccc
     9841 tcaatcgtct gctctttgaa catcgtatct tttcccgtca caattcgtgg catgcttggc
     9901 tatggatcgc gtttgttttt gttttatatg ttttggttat tgtcttccgt aatcagctct
     9961 ccttaggcat gctagtccct atcctgcttg tccaaccatt tctgatttgg tttagctatg
    10021 gttatttgaa gcaacaaacc aaccacctag actatctttc ctactgtatg gacgagtcct
    10081 tgcaaatgga taagaaactt tttgagatga ccaagggaaa tgaatacact cgccagggtt
    10141 tgcagatgca ggcaaaactc aatgcgaaaa caggaaagga cctgtcccac ctgtctggca
    10201 tgacctactt aaatgctctg ctatttgacc gctacaaaaa agtcctctat aagaaggtgc
    10261 agaactgggt cttggcagta gtcgtgattc tggcagccct ggaggggatt cgttactttt
    10321 tagatccgtt tacctttacg gaagcctact tgctccaatt cctaccgctt tccttcatga
    10381 ttatgtacgt agcttcgtcg ggcaaggtag tggctcagat ggtctttgtt aactgcgata
    10441 tttccatgct tcactatccc ttctatcgag aagccaagac tattatcgct ggttttaact
    10501 accgattttt gcagacctgc aagctcaatc tcatctttgc gaccagcctc tttttggcta
    10561 tcatggtgct ggggcggttt gcctttagtt tggaaaccat tctactaact gccctgctcc
    10621 tcatcagtct gaccgctctt ttttccttcc acgatctctt tatctactat attctccagc
    10681 cttttaccaa tgacatggat gtggtcaatc ccctctataa atttcttagt ggtgctctct
    10741 actgggtggc ctatctcaac acccgaatca atgtaggtag ccacacctat atcctgctgg
    10801 tttccctagc tatgattgcc tatgttagca tcggttactg gattttattg aaaaaagctc
    10861 cgcagacttt tagattaaaa gcatgaaaaa cagcctctcg caagagaagg ctgtttttta
    10921 ggtatgacgt gcatgtcgta tcaaaaaaaa tccaaagtcg aatga
//
LOCUS       DASFQD010000081        10934 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.082, whole genome shotgun sequence.
ACCESSION   DASFQD010000081 DASFQD010000000
VERSION     DASFQD010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 10934)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10934)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10934
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.082"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..1151)
                     /locus_tag="U1021_001578"
     CDS             complement(<1..1151)
                     /locus_tag="U1021_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan bridge formation glycyltransferase
                     FemA/FemB family protein"
                     /protein_id="HEM4712102.1"
                     /translation="MAFCQITKEEFLKHCEQVNEKSFFQSIEMAGLLSKRGYDVRYAG
                     FKNSQSEIVISTLLFCKKMAGGLYMELNSGPLVTDDAYLEKFYQSLKNYAKREGVLEL
                     VVKPSQAYQLFDSVGNPISEADTQLIEKMVQVGFKHDGLQTGYPNGEPVWHYVKDLQG
                     YSTTSLLQSYNKNSKRNIKNSESYGIRIRGINHKELSAFKKIIEETGARQGFEDRDSG
                     YYNSLFESFGTQADFLVAELDPKASLKQIEKEIETSVRNSKQYAQQVQKLLKKQEVVQ
                     NILNKTQTAPIFLACALIIYDVNEATYLFGGSYSEFQSLSAPFLLQYEAMQRAIKRNL
                     KRYNFLGIQGIFDSSDGVLRFKQNFNGYILRKAGTFRYYPHPIKHKIIQ"
     gene            complement(1151..2377)
                     /locus_tag="U1021_001579"
     CDS             complement(1151..2377)
                     /locus_tag="U1021_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyltransferase"
                     /protein_id="HEM4712103.1"
                     /translation="MFYTYKIGISAEEHDSFVKQSPQANLLQSSQWATVKSEWRNERL
                     GFFKDGKLVAVASLLIRRLVVPFGFTMIYIPRGPVMDYEDAELVSFVFKSIEEFALRE
                     RSVVIKFDPFIRLSSKTITGDREEELNVLAVKDRIVDLGGIWSGRVQTMSATIQPTCH
                     AVLYSESFSEESLNKRVRQNIRSARNKGIEIRIGREELLRDFSELLKKTEERKSIRLR
                     GREYYQKILNAYPENSYIVVAYLDLAERYEQLSYLEEKLVKEAMTFTSTTRQSKIENY
                     KKETRRINTELEMINSLIRNGSKLVPLAGTLTIDFAGTSENIYAGMDEKFKHYQPALL
                     TWVETAKYAFERGVKWQNLGGIEPTLDGGLYHFKSHLNPVVEEYIGEFDLIVSPILHK
                     IFQVLLEIRKKLRKKK"
     gene            complement(2673..3401)
                     /locus_tag="U1021_001580"
     CDS             complement(2673..3401)
                     /locus_tag="U1021_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM4712104.1"
                     /translation="MNENWTVKQVSQLTGLTVRTLHHYDQIGLLKPAFVAENGYRYYN
                     QENLARLQEILLFRELDFPLKDIQQLLYVTEINRQQVLRDHITLLELKRERLDRIINH
                     ARLLTEKGGEVMDFHAFDSSQLEAYKTEAKERWGQTAAYAEFEEGYDASKDQAFAREM
                     HSIFEAFGKMQSLEASLPDVQVQVATLQAYITENFYTCTKEILQGLGLMYVEDERFSA
                     NIDRAGGPGTASFVSQAIAIYCQE"
     gene            complement(3464..3904)
                     /locus_tag="U1021_001581"
     CDS             complement(3464..3904)
                     /locus_tag="U1021_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712105.1"
                     /translation="MTVWFQDVVDSLQMISQGDRYYYDSHIDELVYLSVGEFRIESRD
                     GLEEEIEEDVAGRFVGLPTYYDFNPYTFMELYISDLTDGDLSGRLSRAIRGSGAFRRF
                     KNELERCDRLEEWYAFETQCYKELVLDWCQENEIAIVDNRLKKM"
     gene            complement(3908..5560)
                     /locus_tag="U1021_001582"
     CDS             complement(3908..5560)
                     /locus_tag="U1021_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712106.1"
                     /translation="MENWMDYFKPHIVDRGYNLFLDDAVQGLQETGEGYYALVSGSQV
                     YEVEIDLEHGQLVSMWCECPHAQEMNHCKHMAAVLFAISELEGQPAVEGKGQSLAQLL
                     EKLTVEQLRAIVLELAQEDRELANRIQLHFSAQLSSKQVENVKKAIRDLGLPFVDRRT
                     GYIEYRQTRDYERTVEKAMHQYLQPLLDRCEYANFLAVSDAFYHQICQQELDDSIGTT
                     GSLLYRLAGYWQHLLTVAPDKIVQELLDWCLGQLSGYEVAEDLLMEFVETEFQEEPLL
                     QQKLTYFQTTLQAIEEGDMSSWLWKFRRDRFALLCYRLLVQLGSSEADLLTFQANHWE
                     VAGLRKLAIAQAVANQQLDRAVHLLQESKRLDAQYRGLVSDYSQQLRDIYRSQGQDDK
                     VREELLEMIFSAGDTDLELLEELRDYVSREEWQSYLDDLLEDGRFQSQQLKLLQLADR
                     PQELLDRITASYWFLENLDRFEDYLSEKLPEQLRDAYAQALCQQMDVASSRSRYRQLA
                     GYLVKIAGLPDGKVVSTSLRTSWKVQYPRRKAMIEELDAVRW"
     gene            complement(5659..6747)
                     /locus_tag="U1021_001583"
     CDS             complement(5659..6747)
                     /locus_tag="U1021_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HEM4712107.1"
                     /translation="MISGIIAEYNPFHTGHKYLLEQAEGLKIVVMSGNFMQRGEPAIV
                     DKWTRAQMALEHGADLVVEMPFLVSVQSADHFAKGAISILHRLGVEKLVFGTEEMLDY
                     QKIADIYVDKSEEMENFVKNLPDNLSYPQKTQAMWQEFAGLTFTGDTPNHILALAYAK
                     AVAGTGIQLGPVQRQGAGFHSEEVETTYASATAIRKGADQLDLVRDFLPSASLFEEAT
                     KVSWRNYFPLLRYQIATHSDLSQVFQVNEELASRIRSAIGSAATVEELVNAVATKRYT
                     KARVRRVLTYVLVNAVETPLPDAVHVLGFSARGQTYLRTVKERVGLVTRIGKEPWDSL
                     TQQADAVYQLGADAMAEQTYGRVPVRVE"
     gene            complement(6791..7417)
                     /locus_tag="U1021_001584"
                     /pseudo
     CDS             complement(6791..7417)
                     /locus_tag="U1021_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730151.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(7592..8731)
                     /locus_tag="U1021_001585"
                     /pseudo
     CDS             complement(7592..8731)
                     /locus_tag="U1021_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730151.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(8744..9490)
                     /locus_tag="U1021_001586"
     CDS             complement(8744..9490)
                     /locus_tag="U1021_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM4712108.1"
                     /translation="MATYETFAAVYDEIMDDSLYDKWTDFSLRNLPQDTKTILELACG
                     TGIQAVRFAQKGFEVTGLDLSYEMLELAQKKAEAAGVMMELAQADMMALEGVGDFDAV
                     TCYSDSLCYMSDREAVLRVFEGVHSVLNQGGTFLFDVHSIYQMEKVFAGYSYHENYED
                     FAFVWDTYEGEHEHSIVHELTFFVKDKDSQEERFIRRDEVHEERTYPIETYVELLKEA
                     GFASVEVFADFEDQAPTETSQRWFFKCKKK"
     gene            complement(9644..10003)
                     /gene="rsfS"
                     /locus_tag="U1021_001587"
     CDS             complement(9644..10003)
                     /gene="rsfS"
                     /locus_tag="U1021_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEM4712109.1"
                     /translation="MKELDLVKVVVQAADDKRAEDLVVIDVQGVTSLTDYFVIASSMN
                     SRQLEAIAENIREKVAEVGIKSSRVEGDSNGGWVLLDLGGVVVHIFSEEMRDLYNLEK
                     LWHEGSFLEVADFLEEE"
     gene            complement(10005..10514)
                     /locus_tag="U1021_001588"
     CDS             complement(10005..10514)
                     /locus_tag="U1021_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HEM4712110.1"
                     /translation="MKSALLVIDIQNLLVEEKPYAIEERLALWQDSLAQARQAGLEVI
                     HVRHHDQELVKGTADWEIHSIVAPLASEKIFDKTFNSAFKETGLHAYLQEKGIEQLII
                     MGMATNFCIDTTIKVAFELGYKVAVIQDGTTTGYSGKLDAKDLIDHHQNIWSWNFAQV
                     DKLENIIRG"
     gene            complement(10511..10828)
                     /locus_tag="U1021_001589"
     CDS             complement(10511..10828)
                     /locus_tag="U1021_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4712111.1"
                     /translation="MPPYAIWVDEQVVGFALIDIDEDIQQYMLWRFMIGQEFQGKGYG
                     QAALEVVIAMAQSHPVCDHLIAAYVKGNQKMAHLLEKNDFVLDSEEERELVFRLETPG
                     VKL"
BASE COUNT         3117 a         2690 c         1799 g         3328 t
ORIGIN      
        1 atttgaatta ttttatgctt tatcggatga ggatagtaac gaaaagtacc agcttttctc
       61 aaaatataac cattaaagtt ctgtttaaac cgaagaacac catctgagct gtcgaatatc
      121 ccttgaatgc caaggaaatt ataacgctta agatttcgtt ttattgcacg ttgcatcgcc
      181 tcatattgaa gtaagaaagg tgcagatagg ctttgaaact ctgaatatga gccaccaaaa
      241 agataagttg cctcgttcac atcataaatt atcagtgcac atgccaaaaa aataggagct
      301 gtctgagttt tatttaaaat attttgaacc acctcctgtt ttttcaacaa tttctgcact
      361 tgctgtgcat actgttttga atttctaaca cttgtttcta tttccttttc aatttgcttt
      421 agactggctt tcgggtcaag ttctgcaact aaaaaatctg cctgtgtacc aaagctttca
      481 aaaagactgt tatagtaacc actatctcta tcttcaaagc cttgtctagc tccagtttcc
      541 tcaattattt ttttgaaagc tgaaagctcc ttatgattga taccacgaat cctgataccg
      601 taactttctg aattttttat gtttcgttta ctatttttat tgtaggattg caataacgac
      661 gttgttgaat acccttgcaa atccttcaca taatgccaaa caggctctcc atttggataa
      721 cctgtttgta agccatcatg tttaaatcca acttgcacca tcttctcaat tagttgagta
      781 tctgcttcac taattggatt ccctacacta tcaaagagtt gataggcttg ggaaggcttg
      841 accaccaatt caagtacgcc ttcacgctta gcatagtttt ttaaagattg ataaaatttc
      901 tccaaataag catcatcggt aaccagcggt ccagaattca attccatata caaaccacca
      961 gccatcttct tacagaaaag caaagtagaa ataacgattt ctgattgtga atttttaaaa
     1021 ccagcatagc gaacatcata tcctctcttg gatagtaatc cagccatctc aatagattga
     1081 aaaaatgatt tttcatttac ttgttcacaa tgctttaaaa attcttcttt agttatttga
     1141 caaaaagcca ttattttttc ttccttaatt tttttctaat ttccagtaaa acttgaaaaa
     1201 tcttatgtaa tattggcgaa acaatcaaat cgaattcccc aatatactct tctactactg
     1261 gattcaaatg tgatttaaag tgataaaggc ctccgtctaa agttggctct attcctccta
     1321 aattttgcca tttcacacct cgttcgaaag catactttgc ggtctccacc catgttagta
     1381 aagcaggttg ataatgttta aacttttcat ccataccagc atagatattt tcagatgttc
     1441 ctgcaaaatc aattgtcaaa gtaccagcca atggaactaa cttactcccg ttacgaatca
     1501 gagaatttat catttctaat tctgtattta ttcttcgggt ttctttttta taattttcaa
     1561 tcttcgattg tcttgtagtg gaggtgaaag tcatggcttc ttttactaat ttttcttcaa
     1621 gataagataa ctgttcatat ctctctgcta aatccaaata ggcaactaca atataagaat
     1681 tttctggata ggcattcaat attttttgat aatactctct cccccgcaag cgaatagatt
     1741 tgcgctcctc agtctttttt aatagctctg aaaaatctct taacaattcc tcacgaccaa
     1801 ttcgaatctc aattccttta ttacgcgccg accgaatatt ttgtcgaact cgtttattta
     1861 gtgattcctc tgagaaggat tcgctatata atactgcatg acaagtaggt tggattgtag
     1921 ccgacatggt ctgcactcga ccagaccaaa tacctcccaa atcaacaatc ctatctttga
     1981 cggcaagtac atttaattct tcttccctat ctcctgttat agttttacta gatagtcgaa
     2041 taaatggatc gaattttata acaacactgc gttctcggag ggcaaattct tctatggact
     2101 taaatacaaa tgacactaat tcagcatctt cataatccat tacaggacct cttggtatat
     2161 aaatcatcgt aaaaccaaat ggtactacca atcttctgat aagaagagaa gcaactgcca
     2221 ctaatttccc atctttaaaa aagcctagtc tctcatttcg ccactcactt tttacggttg
     2281 cccactgact actctgcaaa agattggcct gtggtgattg ctttacaaat gaatcatgtt
     2341 cctcagcaga aatacctatt ttataagtgt aaaacattga ttattcccct tgttcataat
     2401 tacttttaac gctaattagg aagggcttgc ccgtagtgtc aagccctgct atactagtat
     2461 agcaggcgat tttgtcaagt atttttactc aatcataaaa aataataatg ttttaccata
     2521 tatgccacga aatcacttgt gcatgtatat aatagcttct tttgcttcta atattttaaa
     2581 atttagcaat gtacctccaa gtcataatta aattgatata tacatagcca agatgaacat
     2641 aaaaagccta gttctcacta gactttcctt atttattctt ggcaataaat cgcaatggct
     2701 tgactgacaa aactggctgt tcctggtcca cctgctcggt caatgttggc tgaaaatcgt
     2761 tcatcttcaa cgtacataag acctagcccc tgcaagattt ccttggtgca ggtgtagaag
     2821 ttctctgtga tataggcctg caaagtagct acctgaacct gtacatctgg aagacttgct
     2881 tccaagctct gcatttttcc aaaagcttca aaaatactat gcatctctcg ggcaaacgct
     2941 tgatccttac tggcatcgta accttcttca aactcagcat aggccgcggt ctgtccccac
     3001 cgctccttgg cctccgtctt gtaggcttct agttgactgc tgtcaaatgc gtgaaagtcc
     3061 atgacttctc ctcctttttc tgtgagcaat ctggcgtgat tgatgatgcg gtccagccgt
     3121 tcccttttga gctctaaaag ggtaatatgg tcccgcaaga cctgctgacg attgatctcc
     3181 gtcacataca gaagctgctg aatatctttg agaggaaaat ccaattcacg aaataagaga
     3241 atttcctgca gacgagccaa attctcctga ttatagtagc gataaccatt ttcagccaca
     3301 aatgctggtt tgagcaaacc aatctggtca tagtggtgca aggtcctcac cgtcaatcct
     3361 gtcaactgac taacctgctt aactgtccaa ttttcgttca tagaaatctc ctctctatgc
     3421 ccagtataag ggataacgta aggtgagagt caagggaaaa atattacatt tttttcagcc
     3481 gattatccac aatagcaatt tcattttctt gacaccagtc cagtacaagt tctttgtaac
     3541 attgtgtttc aaaggcatac cattcttcca aacggtcaca tctctctaac tcattcttaa
     3601 aacgtctaaa agcaccgctc cctcgaatag ctcgagatag acggccagac aagtctccat
     3661 cagtcaaatc agaaatatag agttccataa atgtgtaagg gttgaagtca taataagtcg
     3721 gtagacctac aaaccttcca gctacatcct cctcaatctc ctcttctaaa ccatcacggg
     3781 attcaattct gaattcccca acagacagat agaccaattc gtctatgtga ctatcataat
     3841 agtacctatc accttgacta atcatctgca acgaatcaac cacatcttga aaccaaacag
     3901 tcatacccta ccacctcact gcatctaatt cctctatcat ggctttgcgt cgcggatatt
     3961 gcactttcca cgaagtgcga agacttgtac tcaccacttt cccatcaggt aaacctgcaa
     4021 tttttactaa ataccctgct aactgacgat agcggcttcg actactagcc acatccatct
     4081 gctgacaaag agcttgagcg taggcatctc gtaattgctc aggcaatttc tctgataaat
     4141 agtcttcaaa tcgatccaaa ttttctaaga accagtaact tgctgtaata cggtccaata
     4201 attcctgcgg tcggtctgcc aattgcaaca acttcaattg ctgtgactgg aaacgaccat
     4261 cctccagcaa atcatctaag tagctctgcc attcttccct agaaacatag tcccgtaact
     4321 cctctagcag ctccaaatca gtatccccag cagagaaaat catctccagc agttcttctc
     4381 taaccttgtc atcctgcccc tgagaccggt agatgtcccg taactgctgg ctataatctg
     4441 acaccagtcc cctatactgg gcatccaggc gcttactttc ctgcaagagg tgaacggcac
     4501 ggtctagttg ctgatttgct acagcctggg caatggctag tttacgaagt ccagccacct
     4561 cccaatgatt ggcctggaag gtcagcaagt ctgcctcact agagcccaac tgaaccagca
     4621 acctgtaaca gagcaaggcg aatcgatcgc gacggaattt ccataaccaa gaggacatat
     4681 ctccttcttc tatcgcctgc aaagtagttt gaaaataggt caatttctgc tgaaggaggg
     4741 gttcttcttg aaactccgtt tctacaaatt ccatgagaag gtcttctgca acctcatagc
     4801 cacttagctg tcctaagcac cagtctagta attcttggac aatcttatcc ggagctacag
     4861 tcaataaatg ctgccagtag ccagcaagtc tataaagcag actaccagtc gttccaatgg
     4921 aatcatccaa ctcttgctgg caaatctgat ggtaaaaggc atctgataca gccaagaaat
     4981 tcgcatactc acacctatcc agcaaaggct ggagatactg atgcatggcc ttttccacgg
     5041 tccgttcgta atccctagtc tgcctatact cgatatagcc cgtacgcctg tccacaaaag
     5101 gcaaacccaa gtctctaatt gcctttttca cattttccac ttgcttagag cttaactgag
     5161 ctgaaaaatg cagctgaatt cgattggcca gttccctatc ttcttgagct aattcaagaa
     5221 caatagcccg tagttgctca actgtcaatt tttccaagag ctgggcaagt gactgtccct
     5281 tcccctcaac agctggctga ccctccaact cagaaatggc aaacaagact gcagccatgt
     5341 gcttacagtg attcatttcc tgagcatggg gacactcaca ccacatactg accagctgac
     5401 catgctccaa gtcaatctcc acctcataga cttgactacc agagacaaga gcatagtagc
     5461 cctcacctgt ctcttgaagc ccttgaacag catcatctaa aaacaaattg taacccctat
     5521 ctacaatgtg aggcttaaaa tagtccatcc aattttccat gatttatgtc ctttgatttt
     5581 gctacttaaa ttatacaaaa aaaataggag cattttcaag tcaacgacaa aaacttccca
     5641 ttctttattg cattcatctc actccaccct caccggcacg cgcccatagg tctgctctgc
     5701 cattgcgtca gcgcccagtt gatagaccgc atccgcctgc tgggtcaggc tgtcccaggg
     5761 ctctttgccg atcctcgtca ccaagcccac tcgctccttg accgtcctga gataagtctg
     5821 acctcgagcc gagaagccta ggacatggac cgcatctggc aagggagttt ccaccgcatt
     5881 gaccaaaaca taggtcaaca cccgccgcac ccgcgccttg gtgtagcgct tggtcgcaac
     5941 agcattcact agctcctcca cggtcgctgc gctcccaata gcagagcgga tacgactggc
     6001 tagttcttcg ttcacctgaa agacctgact aagatctgag tgggtcgcaa tctggtagcg
     6061 gagcagcgga aaataatttc tccagcttac cttggtcgcc tcttcaaaga gactggcaga
     6121 cggcaagaaa tcacgcacca agtccagctg gtcagcaccc tttcggatag ccgtcgccga
     6181 ggcgtaggtc gtttccacct cttccgagtg aaaaccagcc ccctgccgtt gcactggacc
     6241 aagctgaatg ccagttcccg ctaccgcctt agcataagcc agagccagaa tatggttggg
     6301 cgtatcacct gtgaaagtca gcccagcaaa ctcctgccac atagcctggg tcttctgtgg
     6361 ataagagaga ttgtctggca agtttttcac aaaattttcc atttcttccg acttatccac
     6421 atagatatcc gcgattttct ggtaatccag catttcttcc gtaccgaaaa ccagtttttc
     6481 cacacctagc ctgtgtaaaa tgctgattgc tcccttggca aaatggtcag ccgactggac
     6541 agacaccaaa aagggcatct cgacaacaag atctgccccg tgttccaaag ccatctgagc
     6601 ccgtgtccac ttatccacaa tggctggctc accccgttgc ataaaattgc cagacataac
     6661 cacaattttc aagccttccg cctgttccaa caggtactta tgccccgtgt gaaaaggatt
     6721 gtattctgct attatccctg aaatcatccc ctacctccta gactttattc aaccatctac
     6781 aacctaatgc ctaaattaca gcaaattctt tttctgcaat ctgtactgct tcaagtatat
     6841 cctcttctgc taaaaccgtg cgttttgaga tcactctttc aacctctcgt tcaattattg
     6901 actctctagt aaacatccta tttttaacag attgcttttt ctggaacatg tctttaagtc
     6961 gttctcctaa tttcttatcg aagatattat tttgaatttc tttaaactct tcttctgaaa
     7021 gcgccatagc cataacaata tcaataaatt cttcttttag aattgcaaac atctcaattc
     7081 tgtcatcttc tataaagttg tctaaaacaa ccttagaacc aacagcagcc aatgttccac
     7141 cagctactgc acctacaaat gacccaactg gacctaaaaa tgctccagca actgcaccac
     7201 ctgcaactcc acctagtaag cctgttcctg ctactaagct attctttaat aactgttggc
     7261 tagatattct accttgcagt agatcaaata cgtccggacc tacagtaatt ccgaatgaaa
     7321 taactcctgc tgcttgtcta gcaacagtat tggctgcgac attcttaact gtttgatcag
     7381 cgattttttt agtaagaatt tttccaattt gttgagaagc tgtgtatata gctgctccca
     7441 acaatatcgt ttttactcca gaatagattg ctgattttgc agcttcttca gtatcttttc
     7501 aagcccattt ttccattgca aaaacaagga caaagcttat tcctgcagct ggaatagatt
     7561 gaatagctcc atcaatggca tcatatttta atgaaacaat atttccgccc ttggcaacca
     7621 gttttgcctc attataagta acattccctt ttctaataat cagataggca tcatcaggct
     7681 cactatgacc cggaactttt ccagctttta tttttttctt catgagttga attgattcat
     7741 tatactggtc tttaggaact tctaactgca tccccttata acggtattct cctccattag
     7801 ccttatcaaa tgctgcattt atcgttccac tagcttttgc atagtatttt gtttgaattt
     7861 tttgatttcc aacaattcta tctgccccat ttttaacatt atctctccct acttgctcta
     7921 ctttttggaa aggatacttt atcttgtcta ttacattatt agcatattca gctgcatgcc
     7981 catgtccttg aggagctttt gcaatagcat taaattgaat atctttcaaa tgaaaaccta
     8041 gcatcatatt taaacctata attgatccta ttttagctcc attttgaaaa ttctctgtat
     8101 gaaaatcatt tttttgcaaa cgatcaataa ctttttctaa atagttttca tgtaaatctg
     8161 ccgtataacc tgttttgata attgagttta aatttgcaac tatatttttt tgttgagcgt
     8221 catcaaattg aaaatttagt ctctcaatct tattaggata aaaaagtaga atttttttac
     8281 ccttacaagt aatcttccat aaacctttta aagggaaaaa ctttttgcta attttatact
     8341 taacatcagc atcattattg ctattttcga tttgttctct aaaataaaat ccatcctgag
     8401 ttaacaacaa accatattcc aaaaactcct cgtcaatttt gctcctaata ggactatagc
     8461 caaaaatctc caaattctct acgtcattaa ctgtacaaac aaaatctttg ctccccaata
     8521 taaaccatct agcccgaccg tagggaatct gcgtactaga atattcaaaa gactcagcta
     8581 atttgcataa ataatcacga ataatatctt cattgtattc atgtatttga cgacttgatt
     8641 ttaaccatat ttgaaacaaa gctacataaa ctaataataa caataaaaga ataacaaata
     8701 ttgcaaccaa gataatgata gctacattca tatccaatac cgcctatttc ttcttacact
     8761 tgaaaaacca ccgctggctt gtttctgttg gagcttgatc ttcaaagtcc gcaaagactt
     8821 ccacagatgc aaaaccagct tctttcaata attccacata ggtttcaatc ggataggtcc
     8881 gctcttcatg cacttcatcc cgacggataa atcgctcctc ttgactgtcc ttatctttga
     8941 caaagaaggt caattcatga acgatggaat gctcatgctc accttcgtag gtgtcccaaa
     9001 caaaggcaaa atcctcgtaa ttttcatggt agctatagcc tgcaaatact ttctccattt
     9061 gatagatgga gtgaacgtca aaaaggaaag tgccaccttg attgagaacc gagtgaacgc
     9121 cttcaaagac ccgcaaaacg gcttctcggt ccgacatata gcacagactg tccgagtaac
     9181 aggtcaccgc atcgaaatct cccacacctt ccagagccat catatctgct tgggccaact
     9241 ccatcatgac accagcagct tctgcttttt tctgggccaa ttccaacatt tcataagaca
     9301 ggtcaagacc tgtcacttca aagccctttt gagcaaaacg tacagcctga atccctgtcc
     9361 cacaggccaa ttctaaaatt gtcttggtgt cttgtggcaa gttccgtaag ctaaaatctg
     9421 tccatttatc atacaagctg tcatccatga tttcatcata gaccgcagca aatgtttcat
     9481 aagttgccat attttccttt cataaaaagc agccaatcga ctgcttcatt aacttactca
     9541 gttttcaaga agtccatcac ttctaattac ataatagtga actctctttg gtcactttcg
     9601 agttttatag tgaccagctg aaacagttcc ccaaactgtt tcactattcc tcttctaaaa
     9661 agtctgcgac ttccaagaag ctgccttcgt gccataattt ttctaggttg tagaggtcac
     9721 gcatttcttc tgagaagata tgaacgacta cgcctccaag gtccaaaagg acccagccac
     9781 cgttactatc gccttctaca cggctactct tgattccaac ttccgctacc ttttcacgga
     9841 tgttttccgc aatagcctcc aactggcgac tgttcatgga gctggcaatc acaaagtagt
     9901 ctgtcaggct ggtcacgcct tgaacatcaa ttacaacaag gtcctcagct cgcttgtcat
     9961 cagcagcctg aaccacaact tttactaaat ctagttcttt catcttatcc tctaattata
    10021 ttttctaatt tatccacctg ggcaaaattc catgaccaga tgttttggtg gtggtcaatc
    10081 aagtctttgg catccaattt gcctgaataa cctgtcgtcg ttccgtcctg aattacagct
    10141 accttgtagc ctagttcaaa ggctacttta atcgtcgtat caatgcaaaa attggtcgcc
    10201 atacccatga tgatgagctg ctcaattccc ttttcctgca aataggcatg aagacccgtt
    10261 tccttgaagg cactgttaaa ggtcttatcg aaaatcttct cactagctaa gggtgcaaca
    10321 attgagtgaa tttcccagtc agcagtcccc ttgaccaatt cctggtcatg atggcggaca
    10381 tggatgacct ctagccccgc ttgacgggct tgtgcaaggc tatcttgcca gagggctaat
    10441 cgctcttcaa tggcataagg tttttcctcc actagaaggt tttgaatgtc aatgactaac
    10501 agtgcggatt tcatagcttg accccaggcg tttccaaacg gaagaccaat tctctttctt
    10561 cttcactatc caagacaaaa tcatttttct ccaagagatg agccatcttc tgattgccct
    10621 taacataagc tgcaatcaaa tggtcgcaga caggatgtga ttgagccatt gctattacga
    10681 cctccaaagc agcctggcca tagcctttcc cctgaaattc ttgaccaatc ataaaccgcc
    10741 agagcatata ctgctggatg tcctcatcaa tgtcaatcaa ggcaaaaccg accacctgtt
    10801 catctaccca gatggcgtag gggggcaagg ttctagtaca agtacacttc tcaaagttcg
    10861 agtcaacatc tcagcgcagt ggttgattgg cagctttgtt cgtgctacac actccaaatc
    10921 tggcctctac gact
//
LOCUS       DASFQD010000082        10877 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.083, whole genome shotgun sequence.
ACCESSION   DASFQD010000082 DASFQD010000000
VERSION     DASFQD010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 10877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10877
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.083"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            201..1376
                     /gene="trpB"
                     /locus_tag="U1021_001590"
     CDS             201..1376
                     /gene="trpB"
                     /locus_tag="U1021_001590"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003005924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEM4712112.1"
                     /translation="MTEKGYFGQFGGSFVPEQIQVLLDQLEETFEQYRNDSEFLAEYQ
                     AYLKDYAGRETPLYFAESLSKELGGAKIYLKREDLNHLGSHKLNNVLGQILLAKRMGK
                     TRVIAETGAGQHGVATAAVAARFGLGCDVYMGAEDVKRQRLNVFRMEMMGARVHAVTE
                     GTQTLKEAVDAAFGAWMADLDAFYVLGSAVGPHPYPTIVHEFQKIISLESRRQILEKE
                     GRLPDYVIACVGGGSNAIGAFSQYLPDESVKLIGVEAAGKGVDTELHAATMTKGTVGV
                     VDGMKTISLFDENGGVAPVYSISAGLDYPGVGPEHAHYKETGRVNYVAATDDEAVNAL
                     LTLSRTEGILPAIESSHAIAEAIRLAPQLDKDKIIIINVSGRGDKDVAAIADYLESR"
     gene            complement(1418..2242)
                     /gene="nadE"
                     /locus_tag="U1021_001591"
     CDS             complement(1418..2242)
                     /gene="nadE"
                     /locus_tag="U1021_001591"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000058066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HEM4712113.1"
                     /translation="MTLQETIIKELGVKPSIDPEEEIRRSIDFLKDYLKKHPFLKTYV
                     LGISGGQDSTLAGRLAQLTMEEMRAETGDDSYQFIAIRLPYGVQADESDAQAALAFIQ
                     PDVSLTINIKESTDAMVAAVNANGLAMSDFNKGNAKARMRMIAQYAIAGERKGAVIGT
                     DHAAENITGFFTKHGDGGADILPLFRLNKRQGKQLLAELGADEKLYLKVPTADLEEDK
                     PGLADEVALGVTYNQIDDYLEGKIIDPQAQTIIEGWWNKTAHKRHLPITIFDDFWK"
     gene            complement(2255..3715)
                     /locus_tag="U1021_001592"
     CDS             complement(2255..3715)
                     /locus_tag="U1021_001592"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEM4712114.1"
                     /translation="MTLFKDDSLTLHTDLYQINMMQVYFDQNIHNKHAVFEVYFRSQP
                     FKNGYAVFAGLERVVNYLNNLSFSQTDIDYLTELGYPQDFLDYLSQLEMTLTVRSAKE
                     GDLVYANEPILQIEGPLAQCQLIETALLNIVNYQTLIATKARRIKAVIEDEPLMEFGT
                     RRAQEMDAAIWGTRAAFIGGASATSNVRAGKIFGIPVAGTHAHALVQTYGDDYKAFKA
                     YAETHHDCVFLVDTYDTLRIGVPAAIKVAKEMGDKINFKGVRIDSGDMAYISKKVRQQ
                     LDDAGFTDAKIYASNDLDENTILNLKMQKAKIDVWGVGTKLITAYDQPALGAVYKIVS
                     IEDEDGNMRDTIKLSSNAEKVSTPGKKQVWRITSKEKGKSEGDYITFADTDVTQMDSI
                     YMFHPTYTYINKTIENFDARPLLVPIFEKGKQVYELPSLAEIQTYANQEFDKLWDEYK
                     RVLNPQLYPVDLAQDVWDNKMNLINRIRKQTQTKSI"
     gene            complement(3823..4467)
                     /locus_tag="U1021_001593"
     CDS             complement(3823..4467)
                     /locus_tag="U1021_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEM4712115.1"
                     /translation="MKTIILFFLGASIGSFLGLVIDRFPEQSIISPSSHCNACKRRLK
                     AWDLIPILSQLSTKSKCRYCKAKIPYWYLGLEFLAGLVVLLCHFQVLNLTETILILAG
                     LVLTIYDIKHQEYPFAVWLVFTFIALVLSQLNWLFCAFLLLAYLTEKWQVNIGSGDFL
                     YLASLALICGFTELLWIIQISSLLGLLVFTIFKPKSIPYVPLLFLSSIPIILCI"
     gene            complement(4521..5339)
                     /locus_tag="U1021_001594"
     CDS             complement(4521..5339)
                     /locus_tag="U1021_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEM4712116.1"
                     /translation="MSSSKNTFIAFLLNLSFSIIEFIFGWLFGSSAILADAVHDLGDA
                     LAIGSSAIMQTYANKPADRFYPFGYKRWNILAALLTSSILIIGSSLILVENLPNLFHP
                     QPVNQDGMLVLGIIAVIINFLASRIVKNGYSHTESILSLHFLEDILGWLAVILVSIIL
                     QFTDWYFLDPLLSFCIAIFILSKALPKVWNNIKILLETSPQGVNLEEVKGVLLALENV
                     HEITQLNVWTMDGYEHCATVTVKLTNPALADKTKAKIRNSLITFGIIQSTIEIL"
     gene            5461..5979
                     /locus_tag="U1021_001595"
     CDS             5461..5979
                     /locus_tag="U1021_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM4712117.1"
                     /translation="MDRRIAKTKRAIFQAFLTLLNDKGYDHMRVQDVIDLADVGRSTF
                     YAHYASKEVLLEELCHDLFHHLFTDREDADVKTLLVHIFKHFRTNQDRVASLLLSRNA
                     YFLRELEAELKHDIFPKVAEDYMQDKRNLPEDLLVHFVVTTFVETVSWWLQQRKKVDE
                     ATLTDYYIRLLA"
     gene            5989..6543
                     /locus_tag="U1021_001596"
     CDS             5989..6543
                     /locus_tag="U1021_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM4712118.1"
                     /translation="MLRPLHMAHAFLDEILTDQDLAVDATMGNGHDTLFLAQRAGKVV
                     AFDIQEQALTTTAEKLEKAGLTNAQLVLTGHENLDQYVEECKAAIFNLGYLPSADKSV
                     ITLPATTLQAIEKVLDRLVVGGRLAIMVYYGHEGGALEKDAVLDFISQLDQTVFTAML
                     YKPLNQVNTPPFLVMVERLKSSSN"
     gene            complement(6559..7338)
                     /locus_tag="U1021_001597"
     CDS             complement(6559..7338)
                     /locus_tag="U1021_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712119.1"
                     /translation="MIISMKNVHYKRQGKTILEDINWEFKQGERWAILGLNGAGKSTL
                     LRILMAEFWKTSGDLTVLGVEFGKGDIPSLRTKIGVVGSFLAERFPIDLTAEQIVLTG
                     KYKSSILYREYGQAELDEAIDMLKTIKADHLIGRTYASLSQGERQLLLIARSLMEEPA
                     ILILDEATVGLDLLARERLLHHIDHICQLPTAPAIIYVTHHAEEITDNFTHVLLLKDG
                     KVLAQGAKQDILTPELLSDFYGNQVELIDLGEGRLFIKPIL"
     gene            7471..8808
                     /locus_tag="U1021_001598"
     CDS             7471..8808
                     /locus_tag="U1021_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HEM4712120.1"
                     /translation="MEDPGSQTIYLQLLILFLLTLFNAFFSASEMALVSLNRSRVEQK
                     AADGEKKYIRLLQVLENPNNFLSTIQVGITFISILSGASLANDLGAVFSKWMGNSTTA
                     QTAGYWLALAMLTFVSIVLGELYPKRIAMNMKENLAVVTAPVIIFLGKIVSPFVWLLS
                     AATNLISRITPMNFDDADEQMTRDEIEYILTKSEKTLDAEEIEMLQGVFSLDELMARE
                     VMVPRTDAFMVDIEDDTATIMAAILKQNFSRIPVYDGDKDNIIGLIHTKKILSEAFSN
                     GFDNLNIRRIMQEPLFVPETIFVDDLLTSLRNTQNQMAILLDEYGGVAGLVTLEDLLE
                     EIVGEIDDETDKTEIFVREIADNTYIVQGNMTLNDFNEHFEMELESDNVDTIAGYYLT
                     GVGTIPSQDEKVSFEVDSKDHHLVLINDKVKNGRVTKLKLLITPLEKEETDKD"
     gene            8925..9716
                     /gene="pflA"
                     /locus_tag="U1021_001599"
     CDS             8925..9716
                     /gene="pflA"
                     /locus_tag="U1021_001599"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase-activating protein"
                     /protein_id="HEM4712121.1"
                     /translation="MMTEIDYRKVTGLVHSTESFGSVDGPGVRFVVFMQGCHMRCQYC
                     HNPDTWDLVNPAAIERTAEDVLNEALRFRMFWGKEGGITVSGGEATIQIAFLIALFTL
                     AKEKGIHTTLDTCALTFRKTERYLEKYSRLMEVTDLVLLDIKEMNPEQHRIVTGHSNK
                     TILECAQYLSDIGKPVWIRHVLVPNLTDRDEDLIELGKFVKTLKNVERFEVLPYHNLG
                     EFKWRELGRPYPLEGTKPPTKARVENAKALMETETYQEYLNRIKG"
     gene            9763..10845
                     /locus_tag="U1021_001600"
     CDS             9763..10845
                     /locus_tag="U1021_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-hexosaminidase"
                     /protein_id="HEM4712122.1"
                     /translation="MLGLFFLGNRTQKEQTKVATTSSSQEISARDKVIANYLNQMTLE
                     EKVGQMIFARMPSAGQTEALETYHFGGYILFASDFEGKTLEQVKEEIASYQSLSKVPL
                     LMASDEEGGTVTRISQLLETPFASPLELYQSGGIKAILSDAKQKTGLLKEEGIYAGFF
                     PVADLFTDPSSFIYDRTIGQDAKTTANYIGQLVSLLKEEQFASTLKHFPGYGDNADSH
                     TDLVYDNRSLEELRANDFLPFKAGIEAEADSIMVSHNIVPAIDDVPSSISPEINKILR
                     NELGFEGVIMTDDFDMQGLVQFVDQDTGALQTIQAGTDMILSSSYASQIPYIIEQVKA
                     GTITEGRIDQSVKRILGMKYDLGLIK"
BASE COUNT         3131 a         2036 c         2602 g         3108 t
ORIGIN      
        1 tttctagtcg aatccataag tgaggtggca ccgtgtcatt gacgccctcg caggttgttt
       61 tttcctgcgg gggcttttcc atttgtcttg tagatatagc gagggattca gtatgaagcg
      121 atggcgtagc aaatagtaaa gaataataga taatggtaag aaaaaatctc agaatgtatt
      181 taaaagaaaa agggaattat atgacagaaa aaggttattt tggacagttt ggtggtagtt
      241 ttgtaccaga gcaaattcag gttttgttgg atcagttgga ggagacattt gaacagtacc
      301 gcaatgattc agaatttttg gcggaatacc aagcttatct gaaagattat gctggtcgtg
      361 aaacgccatt atattttgcg gaatcattga gcaaggagct tggtggagcg aaaatctatc
      421 tcaaacggga agatttgaat cacttaggct ctcataagtt aaacaatgtg ctggggcaaa
      481 ttctgttggc aaaaagaatg gggaaaactc gagtgattgc agaaactggt gctggtcaac
      541 atggggttgc gactgctgct gttgcggcac gatttggttt gggatgtgat gtctatatgg
      601 gggcagaaga tgtcaaacgc caacggctaa atgttttccg aatggagatg atgggggcgc
      661 gtgttcatgc tgtaacagaa ggaacgcaaa ccttgaaaga agcagttgat gcggcattcg
      721 gtgcatggat ggctgatttg gatgccttct atgttttggg ctctgcagtc ggtcctcatc
      781 cctatccaac cattgtccat gagtttcaaa agattattag tctagaatct cggcgtcaaa
      841 ttctggaaaa agaaggtcgt ttgccagact acgttattgc ctgtgtgggt ggcggttcca
      901 atgccatcgg tgcattttct caatatttac cagatgagtc agtcaagctt atcggtgtag
      961 aagctgctgg taaaggagtt gatacagaac tgcatgcggc gactatgact aagggaacag
     1021 ttggtgttgt tgatgggatg aagacaatct ccctttttga tgaaaatggt ggagtagcac
     1081 ctgtttattc catttcagca ggcttggatt atccaggtgt tggcccagaa catgcccact
     1141 ataaggaaac tggtcgtgtt aattatgtcg cagcaacaga tgatgaggct gttaatgccc
     1201 ttttgacctt aagtcgtaca gaaggaattc ttccagccat tgaatcttct catgcgattg
     1261 cagaagctat tcgattagca ccacaactag ataaagataa aatcattatt atcaatgtat
     1321 ctggtcgagg agacaaggat gtcgcagcga ttgcggatta tttggagagt agataaaaga
     1381 aatcccctga cggttgctta tcgtcagggg ttatttgtta tttccaaaag tcatcaaaaa
     1441 tcgtgattgg caggtggcgt ttgtgagcag ttttgttcca ccatccttcg ataatggttt
     1501 gggcttgagg atcgatgatt ttgccttcga gatagtcgtc gatttggtta taggtaacac
     1561 cgagagcgac ttcatcagcc agacctggct tgtcttcttc caagtccgca gtaggaactt
     1621 tgaggtagag tttttcatct gcccccagtt cagctagaag ctgttttcct tggcgtttgt
     1681 tgaggcggaa gaggggcaga atatctgcac caccatcacc gtgcttggta aagaaaccgg
     1741 taatattttc agctgcatga tcggttccga taaccgcccc cttgcgttcc ccagcgatag
     1801 cgtattgggc aatcatgcgc atgcgggctt tagcatttcc cttattaaaa tcagacatag
     1861 caagcccatt ggcattgact gcagccacca tggcatctgt tgattccttg atgttgatgg
     1921 ttaagctgac atctggttga ataaaggcta gggctgcttg ggcgtcggac tcgtcagcct
     1981 gtacaccgta aggtaggcgg atagcgataa attggtagga gtcgtcacct gtttccgctc
     2041 gcatttcttc catggtcaac tgagccaaac gaccagccaa ggtcgagtct tgtccacccg
     2101 aaattcccaa gacataggtt ttcaaaaatg ggtgtttttt caggtagtct ttgagaaagt
     2161 cgatggagcg acggatttct tcttcggggt caatgcttgg cttgacacct agttccttga
     2221 taatggtttc ttgtagggtc ataacatacc tttcttagat ggatttggtc tgagtttgtt
     2281 tgcgaatacg attgatgagg ttcatcttat tatcccaaac atcttgtgcc aagtcgactg
     2341 gatagagctg tgggttgagc acgcgtttgt attcatccca gagtttatca aattcttgat
     2401 tggcataggt ttgaatttcc gctaggcttg gaagttcata gacctgtttt cctttttcga
     2461 aaataggaac taggagagga cgggcatcaa agttctcgat ggttttattg atgtaggtgt
     2521 aagttggatg gaacatatag atactatcca tctgtgtgac atcagtgtcc gcaaaggtga
     2581 tgtagtcccc ttctgatttt cctttttctt tggaggtgat gcgccaaacc tgtttcttac
     2641 caggagtgga gactttttcc gcattagaag acagcttgat ggtgtcacgc atatttccat
     2701 cttcatcttc gatggataca atcttgtaga cagcgcccaa ggcaggttgg tcgtaggcgg
     2761 tgatgagttt ggtaccaact ccccagacat caatttttgc cttttgcatt ttgaggttga
     2821 ggatggtatt ttcatccagg tcattagatg cgtaaatctt cgcatctgta aaacctgcat
     2881 catctaattg ttgacgaact ttcttggaaa tataggccat atcgcctgaa tcaatccgaa
     2941 cccctttgaa gttaatctta tctcccattt ctttggcaac cttgatggct gctggaacac
     3001 caatacgaag cgtgtcatag gtatcaacga ggaagacaca gtcatgatgg gtttcagcgt
     3061 aggctttgaa agccttgtaa tcatctccgt atgtttgaac caaggcgtgg gcatgggtac
     3121 cagcgacagg gatgccgaag attttgccag ctcgaacatt ggaagtcgca gatgctccac
     3181 caataaatgc tgcccgtgta ccccagatag cagcatccat ttcttgggca cggcgagtgc
     3241 caaattccat caagggctca tcttcaatga cagccttgat acggcgagct tttgtggcaa
     3301 tcagggtttg gtagttgacg atgtttaaga gggcagtttc gattagttgg cattgtgcca
     3361 atggtccttc gatttgaaga ataggttcgt tagcgtagac taggtcgccc tccttagccg
     3421 aacggacagt gagagtcatc tccaattggg acaagtaatc aaggaaatcc tgcggataac
     3481 ctagttctgt cagatagtca atgtctgtct ggctaaagct gagattgttg aggtagttta
     3541 caacgcgttc caaaccggca aatacagcgt agccattttt aaaaggttgt gaacggaaat
     3601 agacttcgaa tacagcgtgt ttattgtgga tgttttggtc aaaatagacc tgcatcatgt
     3661 tgatttgata aaggtcggta tgcagggtta aactgtcatc cttaaatagt gtcataacgt
     3721 ttctcctttt gccttccgat caagaaggca ctccaattat tttgatggag ttgaactcta
     3781 atatgccttc tattataaca aaaaaatcga gaaaaactcg atttagatgc acagaatgat
     3841 aggaatactt gaaagaaaaa ggagtggtac gtagggaata gacttgggtt tgaaaatagt
     3901 gaagacaaga agccctagga gggaactaat ctggataatc cagaggagtt ctgtaaatcc
     3961 acatattaag gccaaacttg ccagatagag aaagtcacca gaaccaatat tgacttgcca
     4021 tttttcagtc agataggcta agagtaaaaa ggcacagaaa agccagttga gctgggagag
     4081 taccagagct ataaaagtaa aaacgagcca gacagcaaaa ggatattcct gatgtttgat
     4141 gtcgtaaatg gtcaaaacta gtcctgccaa gatgagaatg gtttcggtta ggtttaggac
     4201 ttgaaaatgg cagagcagga caactagacc agctaagaat tccaatccca gataccaata
     4261 aggtatcttc gccttgcagt aacggcattt ggattttgtc gaaagttggg ataggattgg
     4321 aattaggtcc caggctttga gccgtcgctt gcaggcattg cagtgactag agggggagat
     4381 aatggactgt tcagggaaac ggtcgatgac caatcccaag aaggagccga ttgaagctcc
     4441 aaggaaaaat aggataattg tcttcatacc tatttattcg caaatgggtg gaggaaaatg
     4501 agatattttt aaaaaatttt ttacaaaatt tcgatggtac tctggataat gccaaaggtg
     4561 ataagagaat tccgtatttt tgctttggtc ttgtctgcta aagcaggatt tgtcagtttg
     4621 accgtcacag tcgcacaatg ttcatatcca tccatggtcc agacatttag ctgagtgatt
     4681 tcgtgaacat tttcaagagc cagaaggact cctttaactt cttcaagatt tactccttgc
     4741 ggacttgttt caagcaatat ctttatattg ttccaaactt ttggcagggc tttggagagg
     4801 atgaagatag caatacagaa cgagagaagt gggtctagaa agtaccaatc agtaaattga
     4861 agaatgatgg aaacaaggat gaccgccagc catcccaaaa tatcctctaa aaagtgcaag
     4921 ctgagaatgg attcagtatg gctatagcca ttttttacaa tacgggaagc aaggaaattg
     4981 atgatgacag cgataatccc aagtaccagc atcccatctt gattgacagg ctggggatgg
     5041 aagagattgg gaaggttttc cacaaggatc aagctggagc cgataatcag aatgctagaa
     5101 gtcaagagag cggccaaaat attccatctc ttgtagccaa aaggataaaa cctatcagca
     5161 ggcttgttgg cataggtttg catgatggca gagcttccga tggcgagggc gtcacccaaa
     5221 tcatgaacag catctgctaa gatggcgctg gaaccaaaga gccagccaaa gataaactct
     5281 atgatagaaa agctgagatt gaggagaaaa gcgataaatg tatttttaga agatgacatg
     5341 agattccctt tctgtgttat actgtttata ggtttattat gcactgtaat gagccgaaaa
     5401 actagaaaca agagaaacgg tttgtctttt tctgaacaaa ttgtttgaaa tgtacgaaaa
     5461 atggatagac gaattgcaaa aacaaaaaga gctatttttc aagctttttt gaccttatta
     5521 aatgataagg gctatgacca tatgcgcgtg caggatgtca ttgacctggc agatgtgggg
     5581 cgttccactt tctatgccca ctatgccagc aaggaagtac tgttagaaga gctttgtcat
     5641 gacctctttc atcatttatt tacagatcgt gaagatgcgg atgtgaagac cttgttggtt
     5701 catattttca aacactttcg gaccaatcaa gatcgtgttg ccagcctttt gttgtcccgc
     5761 aatgcctatt ttctaagaga actggaagcg gagttgaaac acgacatttt tccaaaagtg
     5821 gctgaagatt acatgcagga taagagaaat cttccagagg atttgctggt gcattttgtc
     5881 gtgacgactt ttgtggagac ggtcagctgg tggctccagc aacgcaaaaa ggtggacgaa
     5941 gccaccttga ccgattatta tataagatta ttagcataag gagagaaaat gcttagacct
     6001 ttacacatgg ctcatgcctt tttagatgag atattaacag atcaggacct agcggtcgat
     6061 gcgactatgg gaaatgggca tgacacgcta tttttagccc agcgagcagg aaaagtggtg
     6121 gcctttgata ttcaggaaca agccctgacc acaacggctg aaaaactaga aaaagctggc
     6181 ttgaccaatg cccaattggt tttgacagga cacgaaaacc tagaccagta tgtggaggag
     6241 tgcaaggcag ccattttcaa tctgggctat cttccttcgg cggataagtc agtcatcacc
     6301 ctgcctgcaa ccacccttca agctattgaa aaagttcttg accgactggt ggtgggtggt
     6361 cgcctagcca tcatggttta ctatggtcac gagggcggag ctcttgagaa ggatgcagtc
     6421 ttagacttta tcagccagct agaccagact gtctttaccg ccatgctcta caaaccgctc
     6481 aaccaagtca ataccccacc atttttggtg atggtggaga gattaaaatc cagctcaaac
     6541 tagggctgga tttgtttttt ataatatcgg cttaatgaac aatcttccct cacccaagtc
     6601 aatcaattcc acctgattgc cataaaaatc gctgaggagt tcaggtgtca ggatatcttg
     6661 ttttgctccc tgtgccaaga ctttcccatc tttgagcagg aggacatggg tgaaattgtc
     6721 agtgatttct tcagcgtgat gggtgacgta gataatggca ggagctgttg ggagctggca
     6781 gatgtggtcg atgtggtgga gtaagcgttc gcgtgccaaa aggtccaagc ctacagtagc
     6841 ttcgtctaaa atcaaaatag ccggctcttc catcaaactt cgggcgatca gcaggagttg
     6901 gcgttctcct tgtgacaaac tagcataggt acgaccaatc aagtgatcag ccttgatggt
     6961 tttgagcatg tctatggctt catccaattc agcttgaccg tattcacgat agaggatgga
     7021 ggatttgtac tttccggtca ggacaatctg ctcagctgtt aaatcaatgg gaaagcgttc
     7081 ggcaaggaaa gaaccaacga ccccaatctt agtgcgtagg ctaggaatat ctcccttacc
     7141 aaactccact ccaagaacag tcaggtcacc agaggtcttc caaaactcag ccattaaaat
     7201 acgaaggagg gttgactttc cagctccatt tagccctaaa atagcccaac gctctccttg
     7261 tttaaattcc cagttgatgt cttctaaaat agttttacct tgtcgtttat agtggacatt
     7321 cttcatcgaa ataatcatag ttgctctcct attccttttg attattgtaa cataaacaga
     7381 catgagggac taattataac aagaaatatg ttaaatttta gaatttgtgg tataatggga
     7441 atgttataaa ttttattata ggagaacatc atggaagacc ctggtagtca gaccatctat
     7501 ttacaactgt taattttatt cttattgact ctgttcaatg ccttcttttc agcctctgaa
     7561 atggcgcttg tttctctaaa tcgttcaaga gtagaacaaa aggccgcaga cggtgagaag
     7621 aaatacattc gcttgcttca agttttagag aatcctaaca attttctatc aaccattcag
     7681 gtcggtatta ccttcatctc catcctttca ggtgccagct tggctaatga tttgggagct
     7741 gtattttcca aatggatggg gaattcaaca acagcgcaaa ccgcaggata ctggcttgca
     7801 ctggctatgt tgacctttgt ttcaatcgtt cttggcgaat tgtaccctaa gcggattgcc
     7861 atgaatatga aggaaaatct ggcagtagtc actgcaccag tgattatttt ccttggaaaa
     7921 attgttagtc cgttcgtgtg gttattatca gctgcaacga atcttatcag ccgtattact
     7981 cctatgaatt ttgatgatgc ggatgagcaa atgacacggg atgaaattga atatattttg
     8041 acaaagagtg agaaaacctt agatgccgaa gaaatcgaaa tgcttcaagg tgtgttctct
     8101 ttagatgagc tgatggcacg tgaagtaatg gttcctcgta cggatgcttt catggtggat
     8161 attgaggatg atacagcaac catcatggca gctatcctca agcagaattt ttcacgtatc
     8221 cctgtttatg atggtgataa ggacaatatc attggtctga ttcataccaa gaaaatcttg
     8281 tcagaagctt tcagtaatgg ctttgataat ctcaacatcc gccgcattat gcaggagcct
     8341 ctcttcgttc ctgaaacgat tttcgtggat gatttgttga catcgttgag aaatacccaa
     8401 aatcaaatgg ccatcttgtt agatgagtat ggtggagttg caggtctcgt taccttggaa
     8461 gatttgctgg aagaaattgt cggtgaaatt gatgacgaaa cggacaagac agaaattttt
     8521 gtccgagaaa ttgctgacaa cacctatatc gtccaaggaa atatgacctt aaatgacttc
     8581 aatgagcatt ttgagatgga gttggaaagt gataacgttg atacgattgc tggttattat
     8641 ctgacaggag tcggtaccat tccgagccaa gacgagaaag tttcctttga agtggatagt
     8701 aaagatcacc acctggttct tattaacgat aaggtaaaaa atggtcgtgt aacaaaatta
     8761 aaactcttga ttacaccact ggagaaagaa gaaaccgata aggactaggg caacctagtc
     8821 ttttagcttt tttcttaagg aagatgatag ttatgaaaga aagtaaatga tagaagcgtt
     8881 ttcatttttg tgatatacta gtcttataaa atgatgagga tgagatgatg acagaaattg
     8941 attatcgtaa agtgacaggt ttggttcatt caacagagag ttttggttcg gttgatggcc
     9001 caggggtacg ttttgtagtc tttatgcagg gctgtcacat gcgttgccag tattgccata
     9061 acccagatac ttgggatctg gtcaatccag cagcgattga gagaacggca gaagatgtct
     9121 tgaatgaagc cctgcgtttt cgtatgtttt ggggaaaaga aggggggatt accgtttcag
     9181 gtggtgaagc aaccatccag attgcttttt taattgcttt gtttaccctt gcaaaagaaa
     9241 aagggattca cactactttg gatacctgtg cgttgacttt ccgtaagaca gagcgttact
     9301 tggaaaaata tagtcggctt atggaagtaa cagatttggt gctccttgat attaaggaaa
     9361 tgaatcctga gcaacaccgc attgtgactg gtcatagtaa caagactatt ttagaatgtg
     9421 ctcaatatct atcagacatt ggtaagcctg tttggattcg tcatgtcctg gtaccgaatt
     9481 tgactgaccg agatgaggac ttgattgaac ttggtaagtt tgttaaaaca ttaaaaaatg
     9541 tcgaacgttt tgaggtgtta ccttatcaca atcttggtga atttaagtgg cgtgagttgg
     9601 gcagacccta tccactagag gggaccaagc ccccaacgaa ggctcgagtg gaaaatgcaa
     9661 aggccttgat ggagacagag acctatcagg agtacttgaa tagaattaag ggataatagt
     9721 gagaggtctg agattgctgc gaaaaagatt taaattggac ttatgctagg cttgttcttt
     9781 ttgggaaatc gaacacaaaa ggagcaaacc aaagttgcaa cgacatcatc tagccaagaa
     9841 atatctgcta gggacaaagt gattgcaaat tatctaaatc agatgacctt agaagaaaag
     9901 gtcggacaga tgatctttgc tcgaatgcca tctgcaggac aaactgaggc attggaaacc
     9961 tatcattttg ggggctatat cttatttgca agtgattttg aaggtaagac actggagcag
    10021 gttaaagaag agattgcttc ttatcaatca ctttcaaaag taccgctatt aatggcttca
    10081 gatgaggaag gtgggacagt aactcggatt agtcaacttc tggaaacacc ttttgcatcg
    10141 cctttggaat tgtaccaatc tggcggcatt aaagcgattt tgtcggacgc caagcagaag
    10201 accggtcttt taaaggaaga gggaatctat gcaggcttct tcccagttgc ggatttattc
    10261 accgatccat catcttttat ctacgatagg accattggac aggatgcgaa aaccaccgca
    10321 aactatattg gtcaattggt ttcattgttg aaagaggaac aatttgcttc gaccttgaaa
    10381 catttcccgg gttatgggga caatgcagat tcgcatacgg atttggtcta tgacaatcgt
    10441 agtttagaag aattacgggc taatgatttt ctccccttta aggctggtat tgaagcagaa
    10501 gctgactcca ttatggtcag tcacaatatc gtacctgcca ttgatgatgt cccatcatcc
    10561 atttcacctg aaatcaataa aatccttcgg aatgagcttg gttttgaagg tgtcataatg
    10621 acggatgatt ttgatatgca gggcttggtc caatttgtag atcaagatac aggtgcattg
    10681 cagaccattc aagctgggac agatatgatt ttatcttcaa gttatgccag tcaaattcct
    10741 tatattatcg aacaagtaaa ggctggaact ataacagagg ggcgaattga ccaatccgtc
    10801 aaacggattt tgggaatgaa atatgatctt ggcttaatca aataaataaa gaaagggagc
    10861 gggaaagaac tcgactg
//
LOCUS       DASFQD010000083        10802 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.084, whole genome shotgun sequence.
ACCESSION   DASFQD010000083 DASFQD010000000
VERSION     DASFQD010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 10802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10802
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.084"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            371..1657
                     /locus_tag="U1021_001601"
     CDS             371..1657
                     /locus_tag="U1021_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 125 protein"
                     /protein_id="HEM4712123.1"
                     /translation="MFYTKEIIENWLTGIQKKTADHPSWGSVFERCYTDTLDRTISQL
                     EDGTTFVLTGDIPAMWLRDSTAQVKPYLALAGKDETLLQMIVGLVERQMAFILMDPYA
                     NAFNQAANGRGHQTDHTQMGPWIWERKYEVDSLCYPLQLAYLLWKATGETSHFNQTFF
                     GAAEKIVQLWKLEQHHENSPYSFERDTDRLEDTLTHQGKGAPCTYTGMTWSGFRPSDD
                     ACIYPYLIPSNMFAVVVLGYLGEIAEQFASEEFSDLAEGARQLAQEIDQGIRTFGLTK
                     NQAGETIFAYEVDGLGNQSIMDDPNVPSLLAAPYLGYCQKDDPIYLATRRTILSQENP
                     YYYEGDYAAGLGSSHTFYRYIWPIALAIQGLTMDDKEEKARLLDTMVACDGGTGLMHE
                     SFHVDDPTLYSREWFSWANMMFCELVLDYYDIRPEE"
     gene            1659..4331
                     /locus_tag="U1021_001602"
     CDS             1659..4331
                     /locus_tag="U1021_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HEM4712124.1"
                     /translation="MGKETVHIISHSHWDREWYLPLEEHRMRLVELFDDLFDLFETDP
                     EFRSFHLDGQTIVLDDYLEIRPQNRELLKKYIQDGRLIIGPFYILQDDYLITSEANMR
                     NTLLGHLESKKWGRAPKIGYYPDTFGNMGQAPQLLRQAGIDVALFGRGVKPVGFDNQV
                     LGDDQFQSTFSEMIWEGADGSQVLGILFANWYSNGNEIPVDEEEARVFWEKKLADVRK
                     YASTSHYLLMNGCDHQPVQKNLSQALRLARKLYPDIDFVHSSFEEYIAAVKEELPEDL
                     SCVKGELTSQETDGWYTLANTASSRIYLKQANDQASQLLEQVVEPLVVMTGDKVPRDE
                     LRYAWKLLLQNAPHDSICGCSVDQVHSEMETRFKKVKQVAHFLSQRSLDRWEKQVDSS
                     QLDGLLFTVFNTTACRQTQLVEVDLLVEQEDFRDGQLDQHFQSMAAISLPALGLFTSQ
                     GQEVEVTIEDLGVNFRYDLPKDAFRSANFARQIRVRFVVENQAPFSWQTYQVKPIGDT
                     RVNSSLSEQFENDYYRIDVVDGQLLLEDKRTGQAYKDWLRFEDYGDLGNEYIFMAPKN
                     DQPIYGQIEDFGLVYQTEAVSIAKVVHRLHLPVAMETSLEDEQKRLVEFKHRTSQRSQ
                     EKKDLLLTTYLTLYRHQPQIRIQTDFHNQIKDHRLRAVFDIGIEAENHLADSIFEVVE
                     RPNQPHPAWENPSNPQRHRSFICLSDDRQAMTVSSKGLHEYEILDRGKIALTLLRATG
                     ELGDWGYFPTPEAQCLRECQLDYAFEICPVEEGFASFQRAQAFQGHLLTKQLTSHSGH
                     LPCNHQFLSHPALEEDRLCVTSLKVAETSDRILLRYYNMSQEQLAGWSEWTEGVDLLE
                     EPLEDLPDRIGSQAIRTEVIGYLEKEKEYGSSLF"
     gene            4312..5178
                     /locus_tag="U1021_001603"
     CDS             4312..5178
                     /locus_tag="U1021_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM4712125.1"
                     /translation="MVVACFDIGGTGIKAGLIGSDKQINYRQEWKTPSSLEELLGLMD
                     SVIQPVNGLEAISLSIPGAVDLETGVIQGLSAVPYIHGVSWYELLSQYGCPVYLENDA
                     NCVGLSELAVDDQLSTFACVVCGTGIGGALIVDRKLIRGKQGFGGEFGYMLIATGKGP
                     LKNWSQLASTGSLVRQVASQYEEAVEDWNGKRIFELAEQGDEVCLLAIEEMTRNLAYG
                     ILNISYFLEPEVLAIGGSISQNPVFIQAIQEQLGAIQKEYPEEFPYLPAIRACHYQQD
                     ANLMGAYMKTLQ"
     gene            5191..7071
                     /locus_tag="U1021_001604"
     CDS             5191..7071
                     /locus_tag="U1021_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HEM4712126.1"
                     /translation="MLQINHSLQQSEGVLEEICSGLGLDCQLELEVDGKENLRIEGSA
                     DSYRIRAPKEYMIYRGLLVLASQLSQGETDIQILERPAYRQLGFMEDCSRNAVLTVEA
                     SKILIRQLALMGYSHFQLYMEDTYQLRDEPYFGYFRGAYTKEELQAIEEECHRYGMEF
                     IPCIQTLAHLIAYLKWNISSIQAIRDVDNILLIGDERTYALIDKMFEALSHLKTRTIN
                     IGMDEAHLVGLGQYLNQHGYQKRSLIMCQHLERVLDIADKYGFHCSMWSDMFFQLLTA
                     SKDYTGQLEIDSEIQAYLDRLKDRVTLIYWDYYQTSRESYGQKLASHQQLGEQIAFAS
                     GAWKWIGFTPDNDFSMRIAPEAHAACQEYGVQEVTVTAWGDNGGECATFSILPSLHAW
                     AELQYRGNLGCLAEHFYQLHQVSLDDFLQLDLPNKTPSHPGPGHHGFNPSRYILYQDI
                     LCPLLQEHIDAEKDSAFYQELAPRLAEIGSRAKGYAYLFDTQAKLCQVLATKAAISVG
                     IRQAYQEGNRQVLAEQVDGLQQLRIDLESFYQALSYQWMVEKKVFGLDTVDIRLGGLD
                     ARIRRAIQRLQAYLNNEVPKLDELEVPILPYDDFHQDKGFIATTANQWQIIATASTIY
                     TT"
     gene            7273..8202
                     /locus_tag="U1021_001605"
     CDS             7273..8202
                     /locus_tag="U1021_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM4712127.1"
                     /translation="MKDLIKNLKQNAIFFLMVLPGVIWLILFFYIPVFGNVIAFKDYR
                     HTGNGFWDSLIQSKWIGLDNFKFLFQSSDAYIITRNTILYNLGFIVLGLIFAVGIAII
                     FSEMRSKKLVKIYQTTTLFPYFLSWVIISFFVYAFLSPDKGLINNILKGMGMDPINWY
                     STPTYWPFILLFLGIWKGLGYNSIIYYATIMGIDPTYYEAAIVDGATKWQRIRYVTLP
                     QLMPLMTILTILAVGNIFRADFGLFYQIPKNSGPLFNVTQVLDTYVYRGIAGTGDIGM
                     AIAAGLYQSVVGCILVVVTNLIVRRFDKESALF"
     gene            8212..9135
                     /locus_tag="U1021_001606"
     CDS             8212..9135
                     /locus_tag="U1021_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001075101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM4712128.1"
                     /translation="MKKKKQITSVSIHSFSKKTDLFFSSLLGIFALSCTLPFIFVIII
                     SMTDETSLAINGYSFWPEQWSLAGYEYLFQLKDQILQALFITFFVTIVGTSLNVFFTV
                     LYAYAISRNSFRYRRFFTLMALFTMLFSAGTIPTYIVMTSFLNLKDTVAALILPMLLS
                     PFNIMVMRSFFRKTISESIIESARIDGASEFRIFFQICLPLTLPGIATIALFTALAFW
                     NDWYNALLYIQSDNLFPLQYLLMKIQANIQYLSENAAAAAAMSSEVAGALPKEATRMA
                     IVVVSTLPIACLYPFFQRYFVKGLTIGGVKE"
     gene            9205..10686
                     /locus_tag="U1021_001607"
     CDS             9205..10686
                     /locus_tag="U1021_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4712129.1"
                     /translation="MKTWKKFAYSCVTLASAAALAACGSLTGNKTASSSATTEDGLTN
                     ILMYQIGDAPKNIDVLLENANKIIEKEAGAHLDIKYISWGDYKDKMAIITSSGEEYDI
                     AFADNYIINAQKGAYADLTELYKKEGKALYDIIDPAYIKGNTIDGKIYAVPVIGNVAS
                     QQMLSFNQDMVDKYGFDISKVDSYDDVESMLATIKEKEADVTPFAWVKSSKPSTDGLE
                     YPAGNELPFAIDLKGDTTKVVNPFEVDRHMDNLRTIHKYYKAGYIMADAATTDATFSL
                     DVANWFVREETQGPADIGDSLLSTVAGYKITSKPITSAYKTSGSTQVANFVISKTSKN
                     KEKAMEVLTLINTNPELLNGLVFGPEGVNWEKDPSAENRIKLLDGYKGDTRMSAWNTG
                     NSQILYITDKVTDEDVKKAEELLAGAEESPLLGFNFNADAVKTEITSIQNIMSQYAAS
                     INTGTVDPDVAVPEMLKKLEAEESYKKVKEEMQKQYDEFLANK"
BASE COUNT         3071 a         2230 c         2521 g         2980 t
ORIGIN      
        1 tttccaactt caaacactcc acgggattgt ttgaactctc cttacctaac tctagttatg
       61 cctgcggctt ttgatgtgaa catcgttcac tttatcccca atctccaact atctcccaga
      121 tagttggagc gagtactaaa agactatatt gataataagt ggtgtctcct tattatatag
      181 agaaagggaa agaaaggaaa gcgttttcta aaactggcaa tatttgtgta aaaatgcgtt
      241 taatttgtgt ataggatttg catttggaat tgtatagact gatactagga accttgtgtc
      301 taatgaaaac tacatggatt tgccagatag aggttggaag aactctgagc aaggataaaa
      361 aggagaaatc atgttttaca caaaagaaat catagagaac tggctgacag gcattcaaaa
      421 gaaaacagca gaccacccaa gttgggggag tgtatttgaa aggtgttata cggatacgct
      481 tgataggacc attagtcaac tggaggatgg gactactttt gtcttaacag gggacattcc
      541 agccatgtgg ttgagagact ctacagccca ggtcaaaccc tatctagccc tagcaggcaa
      601 agatgagaca ttgctccaga tgattgtagg tctggtagag aggcaaatgg cctttatttt
      661 gatggatcca tatgccaatg cctttaatca ggcagctaat gggcgggggc accagaccga
      721 ccacactcag atgggaccct ggatttggga gcggaaatat gaggtggatt ccctctgcta
      781 cccccttcaa ttagcctatc tactttggaa agcgacaggg gaaaccagtc attttaacca
      841 gaccttcttt ggggcagctg aaaaaattgt tcaactctgg aaattggagc agcaccatga
      901 aaactcccct tatagctttg aacgggatac tgaccggcta gaggataccc ttacgcacca
      961 aggaaaaggg gctccctgca cctatacagg gatgacttgg tctggttttc gtccaagcga
     1021 tgacgcctgc atctaccctt acctcatccc ctcaaacatg tttgcggtcg tcgtcttggg
     1081 ttatttagga gaaatagcgg agcagtttgc cagtgaggaa ttctcagatt tggctgaagg
     1141 tgccagacag ttggcgcagg aaattgacca ggggattcgg actttcgggc tgaccaagaa
     1201 tcaggcggga gaaactattt ttgcctatga agtggacgga ttgggcaatc agtctatcat
     1261 ggatgacccc aatgtcccaa gtttgctagc ggctccctat ctaggctatt gtcagaaaga
     1321 tgatcccatc tatttggcaa cccgtcggac tattttaagt caagaaaatc cctattacta
     1381 cgagggtgac tatgctgctg gtcttggttc cagtcatacc ttctatcgct atatctggcc
     1441 gattgccttg gctattcaag gcttgacaat ggatgacaag gaagaaaaag cgcgcttgct
     1501 ggataccatg gtagcctgtg atggcggtac tgggctgatg catgagagtt tccatgtgga
     1561 tgatccgacg ctttactcca gagagtggtt ctcctgggca aatatgatgt tttgcgaatt
     1621 ggttttagat tattatgata tacgaccgga ggaataaaat gggaaaagaa acggttcata
     1681 ttatttcaca tagccactgg gatagggaat ggtatcttcc tttggaagaa catcggatgc
     1741 gcttagtaga gctatttgat gacctatttg acttatttga aacagatcct gagtttagga
     1801 gttttcatct agatgggcag accattgtcc tagatgacta tctggaaatt cgtccgcaga
     1861 atcgagagtt attgaagaaa tacattcaag acggtcggct gattattggt cccttttaca
     1921 tcttgcagga tgattacctc atcaccagcg aggccaatat gcgcaatacc cttctgggtc
     1981 acttggaaag caagaagtgg gggcgggctc cgaagattgg ctattatcca gatactttcg
     2041 gcaatatggg acaggctcct cagctactgc gtcaggctgg tatagatgtg gccttgtttg
     2101 gtcgaggggt caaaccagtt ggctttgata atcaggttct gggagatgac caattccagt
     2161 ccactttctc ggagatgatt tgggaggggg cagatggcag tcaggttctg ggcattttat
     2221 ttgctaactg gtacagcaat ggcaatgaaa ttccagttga tgaggaagaa gcgcgtgttt
     2281 tttgggagaa aaaattggca gatgtccgca aatacgcttc aacctcccac tatctgctga
     2341 tgaatggctg tgatcaccag cctgtccaaa aaaatcttag ccaagctttg cgactggctc
     2401 gaaaactgta tccagatata gactttgttc attcaagctt tgaagaatat atcgcagctg
     2461 tcaaggaaga attaccagag gacctcagtt gcgtcaaggg agaattgact agtcaggaaa
     2521 cagatggttg gtacaccttg gcaaatacgg cttcttcgag aatctatctc aagcaggcca
     2581 atgaccaagc cagccagctt ttggaacaag ttgtagaacc cttggtggtg atgacaggag
     2641 ataaggtgcc cagagatgag ctacgttatg cctggaaact cttgttgcag aatgctcccc
     2701 atgatagcat ctgtggttgt agcgtagacc aggtgcatag tgagatggaa acccgcttta
     2761 agaaggtcaa gcaagtcgct catttcctga gccagcgctc cctagacagg tgggaaaagc
     2821 aggtggattc tagccaatta gacggcttac tatttacggt tttcaatact acagcctgcc
     2881 gacaaaccca gctagtggag gttgatttgc ttgttgaaca ggaggatttc cgagatgggc
     2941 agttagacca acactttcaa tccatggcag ctatttctct gccagccttg ggcctcttta
     3001 ccagtcaagg ccaagaggta gaagttacca ttgaagatct aggtgtcaac ttccgctacg
     3061 atttaccaaa agatgctttt cgctctgcca attttgcccg ccagattcgt gtccgctttg
     3121 tagtggaaaa tcaagcacca ttttcatggc agacctatca agtcaagccg attggtgaca
     3181 ctagggtgaa tagcagttta agtgaacagt tcgagaatga ttactaccgt attgacgtgg
     3241 tggatggtca gctcttacta gaagacaaga gaacgggtca agcctataaa gactggctac
     3301 gcttcgaaga ttatggggat ctgggcaatg aatatatctt catggcgcct aagaatgatc
     3361 aaccaatcta tggtcagata gaggacttcg gacttgtcta ccaaacagaa gcggtcagca
     3421 ttgccaaggt cgttcaccgt ttgcatctac ctgtggctat ggaaacaagt ctggaagatg
     3481 aacagaagcg actggtagaa tttaaacatc gaacatctca aaggagtcag gaaaagaaag
     3541 acctgctcct taccacctat ctgaccctct accgtcatca accacaaatt cgcatccaga
     3601 ccgatttcca caaccaaatc aaggaccatc gcttacgagc agtctttgat attggtatag
     3661 aagctgagaa ccacttggcg gattccatct ttgaagtcgt tgaacgtcca aatcagccac
     3721 atccagcctg ggaaaatccg tccaatcctc agcgtcatcg cagttttatt tgtctatcag
     3781 atgatcgaca agccatgacc gtttcgagca agggcctaca tgagtatgaa atcctagata
     3841 ggggcaagat agctttgaca ctgcttcgtg cgactggaga gctaggagat tggggctatt
     3901 tcccaacacc agaagcccag tgtttgaggg aatgtcagtt ggactatgcc tttgaaattt
     3961 gcccagtaga ggaaggtttt gccagcttcc aaagagcgca ggccttccaa ggacacttgc
     4021 taactaaaca gttgactagc catagtgggc atctgccgtg taatcatcag tttttgagcc
     4081 atcctgcact tgaagaggac cgcttatgcg tgacttcatt gaaggtggca gaaacttcgg
     4141 accgcattct gcttcgttac tacaatatga gtcaggagca gttagcaggc tggagtgagt
     4201 ggactgaggg ggttgatttg ctagaagaac cactagagga tttgccggat aggattgggt
     4261 cacaggcaat ccgaacagag gtcattggct atcttgaaaa ggagaaagaa tatggtagta
     4321 gcctgttttg atattggagg cacgggtata aaggcgggcc tgattggttc agataagcag
     4381 ataaactata ggcaggaatg gaaaacacca tctagtttag aggaattgtt agggcttatg
     4441 gatagtgtta ttcagccggt aaacggcttg gaggcaattt ccctcagtat acctggagcg
     4501 gtagaccttg aaacaggtgt catccagggg ctgagtgccg ttccttatat ccatggtgta
     4561 tcttggtatg agttattgag tcagtatggc tgtcctgtgt atttggaaaa tgatgccaat
     4621 tgtgtcggtc tgagtgaact ggctgttgat gaccagttat cgacctttgc ctgtgtcgtc
     4681 tgtggtacgg gtatcggtgg tgccttgatt gtggatagaa aacttattcg tgggaaacaa
     4741 ggtttcggtg gcgaatttgg ctatatgctg attgctactg gaaagggacc tctcaaaaac
     4801 tggtcccaac ttgcttctac tggaagtttg gtcagacagg ttgctagtca gtatgaggaa
     4861 gctgtggaag attggaacgg caagcggatt tttgagctag cagaacaggg agatgaggta
     4921 tgtctattag ccattgaaga aatgacacgc aatctagcct atggcatttt aaatatctcc
     4981 tatttcctag aaccagaagt gctggctatc ggcggctcta tcagccagaa tccagtcttt
     5041 atccaagcca tccaggagca actaggggct attcaaaagg aatatccaga agaattccca
     5101 tatctacctg ctattcgtgc ctgccactac cagcaggatg ccaatctcat gggtgcttat
     5161 atgaagaccc tacaataagg agaaatgatc atgttacaga taaaccattc gttacagcag
     5221 tcggaggggg tcttggaaga gatttgttct gggctgggct tggattgcca gttagaactt
     5281 gaagtcgatg gtaaggagaa tttgcggatt gaaggttcag cagattctta ccgtatccgt
     5341 gcgcctaaag aatacatgat ttatcgaggc ttgcttgttt tggctagtca gttgtctcag
     5401 ggggaaactg acatacagat tctagaaaga cctgcctacc gtcaacttgg ttttatggaa
     5461 gattgttctc gaaatgctgt cctgacggtt gaagccagta aaatcttgat tagacaattg
     5521 gccttgatgg gctacagcca tttccagctt tacatggaag atacctacca actacgtgat
     5581 gaaccctatt ttggttattt ccgaggggcc tatacaaaag aagaattgca ggctattgag
     5641 gaggagtgcc accgttacgg tatggaattt attccgtgta tccagactct agcccatctg
     5701 atcgcctacc tcaaatggaa tatatcatct attcaggcca ttcgagatgt ggataatatt
     5761 ctcttgattg gggatgagag gacctatgcc ttgattgata agatgtttga agccttgtcc
     5821 catctgaaaa cacggaccat taacatcggt atggatgagg ctcacttggt tgggctgggt
     5881 caatacctca atcaacacgg ctatcagaaa cgaagtctga ttatgtgcca acacttggaa
     5941 cgggtcttgg atattgctga caagtatggc ttccattgta gtatgtggag tgatatgttc
     6001 ttccagttgt tgacagcgag taaggattat actggtcagt tggaaattga ttcggaaatt
     6061 caggcttatt tggatcgtct caaggacaga gtgaccttga tttattggga ttactaccag
     6121 accagccgtg agagttatgg tcaaaaacta gctagtcatc agcagttggg agagcagatt
     6181 gcctttgcaa gtggtgcctg gaagtggatt ggttttactc ctgataatga tttcagtatg
     6241 cggattgcac cagaagcaca tgccgcctgc caagagtatg gcgtccaaga agtgacggtg
     6301 accgcttggg gagacaatgg tggggaatgc gcaaccttct cgatcttgcc gagtcttcat
     6361 gcctgggcag aactccagta tagaggaaat ttgggctgtc tggctgagca tttctatcaa
     6421 ctacaccaag tttccctaga tgacttcctg caattggatt tgccaaataa gacacctagt
     6481 cacccaggtc caggtcatca cggtttcaat cccagtcgct acatcttgta tcaggatatt
     6541 ctctgcccct tgttgcagga gcatattgat gccgaaaaag acagtgcctt ttatcaggaa
     6601 ttagcgccta gattggcaga gattggaagc cgagccaagg gctatgccta tctctttgat
     6661 actcaggcta agttgtgtca ggttttagcg accaaggcgg caatttcagt aggtattcgt
     6721 caggcttatc aggaaggaaa tcgtcaggtc ttggcagaac aagttgacgg tttgcaacaa
     6781 ctaaggatag acctagaaag cttctatcag gcactcagct accaatggat ggtagagaag
     6841 aaggtgtttg gtctggatac ggtggacatt cgcctaggtg gcttggatgc ccgcattcgc
     6901 cgtgcaatcc agcggttgca agcctatctg aacaatgaag tacctaaact agatgaacta
     6961 gaagtgccaa ttctccctta cgatgacttc catcaggaca agggatttat tgcgacaact
     7021 gccaaccaat ggcagattat tgcgacggct tcaaccatct atacaaccta gtgatgttcg
     7081 agctcgaaag ggctcgattt tttatgcaaa ttttgattag caacccagat tttctttgtt
     7141 ttttacagaa gatatatcgg ttgttatata cacctataat ttgtagaatt ttgcctataa
     7201 tgtggcaatt cacagttggc ccaatcagga gtaaactaat aatgtaaagg ttcataatag
     7261 aaaggagcta tgatgaaaga cctcataaaa aatctaaaac aaaatgccat ttttttccta
     7321 atggtattgc caggagtcat ctggctcatt ctatttttct atattccagt atttggcaat
     7381 gtgattgctt ttaaggacta tcgccataca ggtaacggtt tttgggatag cctcatacaa
     7441 agtaagtgga taggattgga taattttaaa tttctattcc aatcatccga tgcctatatc
     7501 atcacaagaa ataccatcct atataatctt ggttttatcg tactcggact gatttttgca
     7561 gtaggtattg ccattatctt tagtgagatg cggtcgaaga agctggtaaa gatctatcag
     7621 accacaacct tgttccctta tttcctttct tgggtcatta tcagtttctt cgtttacgca
     7681 tttttgagtc cagataaagg attgataaac aatattctca aaggaatggg gatggatccc
     7741 atcaactggt acagcacacc aacctattgg cccttcatct tacttttctt aggaatttgg
     7801 aaaggtttgg gctacaacag tattatttat tatgcaacca ttatgggcat tgacccaacc
     7861 tactatgaag ctgcgattgt ggatggagcg accaagtggc aacgcatccg ctatgtcacc
     7921 cttcctcagt taatgcctct gatgactatt ttaacgattc tggctgtcgg aaatatcttc
     7981 cgagcagact ttggcctttt ctatcaaatt ccgaaaaatt caggtcctct cttcaatgtg
     8041 actcaagtcc ttgataccta cgtttatcgt ggaattgcag gaacagggga catcggtatg
     8101 gctatcgcag caggtctcta tcaatctgtt gtcggctgta tcttggtggt agtgaccaac
     8161 ctgattgttc gtcgctttga taaggaatca gccttattct aggaggggag tatgaaaaaa
     8221 aagaaacaaa tcacttctgt ttctattcat tcatttagta agaaaacaga tctatttttc
     8281 tcaagtttac tagggatatt tgccctatct tgtacccttc ccttcatatt tgttatcatc
     8341 atttctatga cagatgagac aagcttggct atcaacggct attctttctg gccagagcaa
     8401 tggagtttgg caggttatga atatctcttt caattgaaag atcagattct ccaagccctc
     8461 tttatcacct tctttgtgac cattgtaggg acgagcttga atgtcttctt caccgttctt
     8521 tacgcctatg ccatttcgag aaacagtttc agatacagac gattttttac cttgatggct
     8581 ctctttacca tgctgtttag cgcagggacc atcccaacct atatcgttat gacctcgttt
     8641 ttaaatctca aagatacagt ggcagccttg attctaccca tgctgttgtc tcctttcaat
     8701 atcatggtga tgaggtcctt ctttagaaag actatttctg agtctattat cgaatctgcc
     8761 aggattgacg gggccagtga atttcggatt ttcttccaaa tctgcttacc actaacccta
     8821 ccaggtattg caacaatcgc tctctttaca gccctcgctt tttggaatga ttggtacaac
     8881 gctctcctct atatccagag cgataacctc ttccccctcc aatacctgct gatgaaaatt
     8941 caagcaaaca ttcaatatct ctctgaaaat gctgccgcag cagcggccat gtcatcagaa
     9001 gttgcagggg cccttccaaa agaagcaaca cggatggcta ttgtggtcgt atcgactcta
     9061 ccaattgcct gtctctatcc tttcttccaa cgttactttg tcaaaggttt gacaattggc
     9121 ggagtcaagg agtagagaca tcactctatc ttaacaatcg tattccatac ttcattatct
     9181 aaaaaaatag aaaggaacag ccaaatgaaa acatggaaaa aatttgccta ctcctgcgtg
     9241 acccttgcgt ccgcagctgc ccttgccgct tgtggtagtc tgactggaaa taagaccgca
     9301 tcaagtagcg ctacaacaga agatggattg acaaacatcc tcatgtatca aatcggagac
     9361 gcaccgaaaa acatcgatgt tcttttggaa aatgccaata agattatcga aaaagaagca
     9421 ggcgcccatc tagacatcaa gtatatctca tggggtgact ataaggataa aatggccatt
     9481 attacctcat ctggtgagga atatgatatt gcctttgcag acaactatat tatcaatgcg
     9541 caaaaaggag cttatgctga tttaacagaa ctttacaaga aagaaggcaa ggccctctat
     9601 gacattattg accctgccta tatcaaagga aataccatcg acggaaaaat ctacgcagtc
     9661 cctgtcatcg gtaatgtagc tagtcaacag atgctttcct tcaaccaaga catggttgat
     9721 aagtatggtt ttgacatttc caaagtagat agctacgatg atgtggaaag catgttggca
     9781 accatcaaag aaaaagaagc agatgtgaca ccatttgcct gggtaaaatc tagcaaacca
     9841 tcaacagacg gtttggaata tccagctggg aatgagttac catttgctat cgacttgaaa
     9901 ggcgacacta caaaagtggt aaacccattt gaagtggacc gtcacatgga taaccttcgt
     9961 accattcaca aatactataa ggctggctac attatggcag atgcagcgac tactgacgca
    10021 accttctcac ttgatgtagc aaactggttc gttcgtgaag aaacacaagg accagctgac
    10081 attggcgata gcctcctttc aacagttgca ggctataaga ttacttctaa accaatcaca
    10141 tctgcctata agacaagcgg atctacccaa gtagcaaact ttgtcatttc aaaaacatct
    10201 aagaacaaag aaaaagctat ggaagtattg acccttatca atacaaatcc agaattgctg
    10261 aacggcttgg tatttggtcc agagggagtc aactgggaaa aagacccaag tgctgaaaat
    10321 cgtatcaagt tgttggatgg ttacaaaggc gatactcgta tgtcagcttg gaacacaggt
    10381 aacagccaaa ttctctacat cactgacaag gtaacagatg aagatgtgaa aaaagcagaa
    10441 gaattgctgg caggtgcaga agagtctcca cttcttggct tcaacttcaa tgctgatgca
    10501 gttaagactg aaattacaag tatccaaaat atcatgagcc aatatgcagc aagtatcaat
    10561 actggtactg tggatcctga tgttgctgtt ccagaaatgc tgaaaaaatt ggaagcagaa
    10621 gaatcctaca aaaaagtaaa agaagaaatg caaaaacaat acgatgagtt tttagcaaat
    10681 aaataattcg atacaggtga tgaagtgtga aaagagggag tgggaaagaa ctcgactggt
    10741 ctaaaaaaag ttcgtcaaca atttttcatt ttaagttgtt gagctgaaac agtctatccc
    10801 ca
//
LOCUS       DASFQD010000084        10669 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.085, whole genome shotgun sequence.
ACCESSION   DASFQD010000084 DASFQD010000000
VERSION     DASFQD010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 10669)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10669)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10669
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.085"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            322..1884
                     /locus_tag="U1021_001608"
     CDS             322..1884
                     /locus_tag="U1021_001608"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEM4712130.1"
                     /translation="MRVIEFLDTTLRDGEQTPGVNFSIKEKVTIAKQLEKWGISAIEA
                     GFPAASPDSFEAVRQIAAAMTKTAVTGLARSVKSDIDACYEALKDAKYPQIHVFIATS
                     PIHREFKLQKTKEEILAQITEHVSYARERFEVVEFSPEDATRTELDYLLEVVQTAVDA
                     GATYINIPDTVGFTTPQHYGEIFRYLTTNVKSDREIIFSPHCHNDLGMAVANTLSAIK
                     NGAGRVEGTINGIGERAGNAALEEVAVALEIRKDFYDVTSPIVLKETLNTSELVSRFS
                     GIAIPSNKAVVGGNAFSHESGIHQDGVLKNPLTYEIITPELVGVKKNSLPLGKLSGRH
                     AFVEKLKELDLYFEEGDVASLFARFKKLADKKEKITDADIRALVAGTEISNRDGFQFK
                     DLRLDSQSDGSIQAQVIFINQDEEEVVVAETGKGSVEAVFNAIDQFFRQEISLERYHI
                     DAITDGIDAQARVLVAVENKATETIFNASGIDFDVVKASAIAYIHANVMVQKENSGQI
                     DKKLSEKDLPHI"
     gene            1893..2939
                     /gene="leuB"
                     /locus_tag="U1021_001609"
     CDS             1893..2939
                     /gene="leuB"
                     /locus_tag="U1021_001609"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEM4712131.1"
                     /translation="MTKKIVALAGDGIGPEIMDAGLAVLEAVAGQVGFAYEIEERAFG
                     GAGIDAADHPLPDATLQACRQADAILLAAIGSPQYDNAAIRPEQGLLQLRKELGLFAN
                     IRPVKIFDSLKDYSPLKADRLDGVDLVMVRELTGGIYFGEHILETDQASDSNTYQAEE
                     IERVVRSAFDLAQKRRKKVTSIDKQNVLATSKLWRKVADEVAKDYPDVTLEHQLVDSA
                     AMLLITNPSRFDVLVTENLFGDILSDEASVLTGTLGVLPSASHAVAGPSLYEPIHGSA
                     PDIAGQGIANPVSMILSVAMMLEESFDLVQAGQTIRQAVEAVFAEGIFTKDLGGTAST
                     KEMTEAIIAQIGGG"
     gene            2942..4333
                     /gene="leuC"
                     /locus_tag="U1021_001610"
     CDS             2942..4333
                     /gene="leuC"
                     /locus_tag="U1021_001610"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEM4712132.1"
                     /translation="MSGKSIFDKLWDRHVITGQEGQPQLLYVDQHYIHEVTSPQAFQG
                     LRDTGRPVRRPDLTFATFDHNVPTVDIHNIRDVISKAQMDALAKNIEDFGIPHAAHGS
                     EHQGIVHMVGPETGRTQPGKFIVCGDSHTATHGAFGAIAFGIGTSEVEHVLATQTIWQ
                     VKPKRLLVEFVGQAQNGVYAKDFILALIARYGVDCGLGHVVEFAGPVIDRLSMEERMT
                     ICNMSIEFGSKMGILAPDQTTFDYLRGRECAPADFDAAVADWKELYSDADTVYDKHLV
                     LDVSDLAPMVTWGTTPAMGVSFDEIFPAIRDHNDERAYAYMDLAPGQKAADIPVGYVF
                     LGSCTNARLSDLQLAARIVKGRKIAEQVTAIVVPGSRPVKRAAEKLGLDKIFMEAGFE
                     WRDPGCSMCLGMNPDKVPAGVHCASTSNRNFEDRQGFGAKTHLCSPAMAAAAALYGHF
                     VDTRQLDILKEGV"
     gene            4333..4926
                     /gene="leuD"
                     /locus_tag="U1021_001611"
     CDS             4333..4926
                     /gene="leuD"
                     /locus_tag="U1021_001611"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018167039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEM4712133.1"
                     /translation="MHQFTIWTGTTVPLMNDNIDTDQLLPKQFLKLIDKKGFGKYLLY
                     AWRYLDDNYTDNPDFIINQPEYQGASILISGDNFGAGSSREHAAWALADYGFKVIIAG
                     SFGDIHYNNDLNNGILPIIQPKEVRDQLAQLGPDQEITVDLADQLIRTPFGEFPFDIE
                     QDWKHKLLNGLDDIGITLQYQDLITEYEGNRPSYWQE"
     gene            4989..5774
                     /locus_tag="U1021_001612"
     CDS             4989..5774
                     /locus_tag="U1021_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002276310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HEM4712134.1"
                     /translation="MTKQIHWDSALSQEGFDIIKGEGGVIVCPTKVGYIIMTADKAGL
                     ERKFDAKERKRNKPGVVLCGSMEELRELAQLTPEIDAFYQKHWDEDILLGCILPWKPE
                     AYAKLQAYGDGREELMTDVRGTSCFVIKFGVAGEQIAKEMWEKEGRMVYASSANPSGK
                     GNRGKVEGIGERIASKVDLIIEADDYVASIQPDKTIETRYEQGVMVSMVDKDGKLIPE
                     QGADSRSISPCPVVIRKGLDIDKIMMHLSDHFNSWDYRQGEYY"
     gene            complement(5963..6577)
                     /locus_tag="U1021_001613"
     CDS             complement(5963..6577)
                     /locus_tag="U1021_001613"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEM4712135.1"
                     /translation="MSVIERLTKAAHLIDMDDIIREGHPTLRQVAEEVAFPLSDQEII
                     LGEKMMQFLKHSQDPVMAEKMKLRGGVGLAAPQIDVSKRIIAVLVPNPEDEEGNPPAQ
                     AYSLQEVMYNPKIVAHSVQEAAMEGGEGCLSVDREVQGYVVRHARVTVDYMDKNGETH
                     RIKLKGFNAIVVQHEIDHLNGVMFYDRIDPEHPFAVKEGMLVIE"
     gene            6707..7870
                     /locus_tag="U1021_001614"
     CDS             6707..7870
                     /locus_tag="U1021_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM4712136.1"
                     /translation="MKRILEKASLLALSTMLVSTFAVSPAIPQMIEHFAQQGIAAAQV
                     ENLITVTSFAIMVTLLANGLVVRFLSERNIIIAGLLLMAIGGALPMFLTAYPLILLAR
                     ILLGLGIGLINARAINIIGNFFTGQERVQMMGLRGSAEVLGSAGLTLLVGWLTQFGWQ
                     PAFLVYLFALVILALFLLFVPKEELLARMEVKVEENAPKVKLDKTMWMMGIYLAFLAF
                     FVINVNAFLTIRIPQIVLAKGIGTAQQASLILSLMQVMGIVAGTVFSSLVGRLKGWLL
                     AVSYVVFGLAVVGIAFADNLWVLGLGGMVSGFFYSIILTIVFSQVTDRAPKALLNAVM
                     TIVLMGCNIGGATSAILPTYLEKLNPTPTGAFGIYAIGCALISAGLIYKQLKK"
     gene            7907..8077
                     /locus_tag="U1021_001615"
                     /pseudo
     CDS             7907..8077
                     /locus_tag="U1021_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028520.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
     gene            8084..8533
                     /locus_tag="U1021_001616"
     CDS             8084..8533
                     /locus_tag="U1021_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4712137.1"
                     /translation="MDYFYIMPLPQDLALEIANQWRYQPPLDAYTISANPETYAEMIS
                     PEARGDRFFAVIRNAALMGYFCIDQDGETVDIRLGMKPSLTGQGNGRAFYQAIEDYLV
                     EHVQPASIKLTVASSHQVAQKLFHALGFTEIEKQSEYIKMEKKLVCD"
     gene            8524..9252
                     /locus_tag="U1021_001617"
     CDS             8524..9252
                     /locus_tag="U1021_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004185339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEM4712138.1"
                     /translation="MRLDKFLVDCGVGSRTEVKKLLKNKQVTVNGQVETSPKQQIDEK
                     KDQIAVAGQVLSHETFVYYLLNKPKGVISATEDDRHRTVLDLLDNTARQKEVFPVGRL
                     DIDTHGLLLLTNNGQLAHAMLSPKKHVDKLYRAQVDGIMTQEDAERFAAGIELKDFTC
                     QPAQLTILSTDEAKQTSLVDITIREGKFHQVKRMVQACGKTVTDLQRLTMGPLELDPV
                     LALGEYRRLTAAELKQLEVFGVEL"
     gene            9256..9693
                     /locus_tag="U1021_001618"
                     /pseudo
     CDS             9256..9693
                     /locus_tag="U1021_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638669.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="purine/pyrimidine permease"
     gene            10115..10624
                     /locus_tag="U1021_001619"
     CDS             10115..10624
                     /locus_tag="U1021_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712139.1"
                     /translation="MLKYIRAFPLVIVAGAVVYFTIFICIDNGDWTYVVTRALGLKEE
                     HANNVSLIVIGAQSLFLTSDWFYKRIRAFLNRRLEKAKGLNRQIYLGYKAGIEFLMAL
                     PKRTILFTFYLLLVVAESVGLIEKAKDYAAVIIFIIAVDRVTKIWPEEKRRMIEFSQK
                     IKKRIKSVG"
BASE COUNT         2778 a         2203 c         2676 g         3012 t
ORIGIN      
        1 tgctgtattg ttcggatttt tcagaaaatt tccatttttc tgttgacaag tgaaaataag
       61 tagggtatca ttgtaaataa ttaaaatact gaaaggaaaa agtcaaatga aacctgtcac
      121 tacaaaattc tttgctttgt tgttgcgacg gtcgggctag tgcactaggt agcattagtc
      181 ctgtttggct taccaagcgg gcgctgttga caacatctcg cgggtaggag tcctcgaggt
      241 gttttctttt tcttagtata ctttgaaaac taagaaagag aacctaatat tgacgttagg
      301 gttatttaga aaggtattct tatgcgtgtg attgaatttt tagatacgac tttacgagat
      361 ggtgaacaga cgccaggtgt gaatttttct atcaaggaaa aagtgaccat cgccaagcag
      421 ttggaaaaat gggggatttc tgccattgaa gcgggtttcc cagcggccag tcctgattcg
      481 tttgaagcgg ttcgtcagat tgcggcagcg atgaccaaga cggctgtgac aggtttggca
      541 cggtcagtaa aatcagacat tgatgcttgt tatgaggctc tgaaagatgc taagtatccg
      601 cagattcacg ttttcattgc gaccagcccc attcaccgtg aatttaaact tcaaaagacc
      661 aaagaagaaa ttttggcgca aatcactgaa catgtcagct atgcacgtga gcgttttgag
      721 gtggtcgagt tctcgccaga ggatgcgaca cggacggagt tggattactt gctagaagtg
      781 gtgcagacag cggtagatgc tggtgcgacc tacatcaaca ttccagatac agtcggtttt
      841 acgactcctc agcactacgg agaaattttc cgttacttga caacaaacgt caaatcggac
      901 cgtgagatta ttttcagtcc gcattgccac aatgacctag gtatggcagt tgccaatacc
      961 ctttcagcta ttaaaaacgg tgcaggtcgt gtcgagggga ccatcaacgg tatcggtgag
     1021 cgagcaggga atgcggccct tgaagaagta gcagttgccc ttgaaattcg gaaagatttc
     1081 tacgatgtga ccagtccgat tgttctaaag gaaacgctca atacttcgga attggtctct
     1141 cgcttttctg ggattgccat tccaagcaat aaggcggttg tcggtggcaa tgccttctct
     1201 cacgagtcag gtattcacca agatggtgtc ttgaaaaatc cattaaccta tgaaatcatt
     1261 acacctgagt tggtaggggt caagaaaaat tctctgccac tgggtaaact atctggtcgc
     1321 cacgcttttg tagaaaagct gaaagagcta gacctgtatt ttgaagaagg agacgttgct
     1381 agcttgtttg ctcgtttcaa aaaactggca gacaagaagg aaaaaattac ggatgctgat
     1441 attcgagctc tagtagctgg gacagaaatc agcaatcgtg atggtttcca atttaaagat
     1501 ttacgtttag atagtcagtc tgacggcagc atccaggctc aggtcatctt catcaatcag
     1561 gatgaggaag aagtggttgt tgctgaaact ggtaagggtt cggttgaagc tgtctttaat
     1621 gccattgacc aattcttccg gcaggaaatc agcttggaac gttaccatat tgacgccatt
     1681 accgacggta tcgatgccca ggcgcgtgtg cttgtcgctg tagaaaacaa ggcaacggaa
     1741 acaatcttta atgcctctgg tattgacttt gacgtggtga aggcttctgc cattgcctat
     1801 atccatgcta atgtcatggt gcaaaaagaa aatagtggac agatagataa gaaactatca
     1861 gagaaagact tgccacacat ctaggaggga atatgacgaa aaaaattgta gccttggctg
     1921 gtgatggaat cggtcctgaa atcatggatg ctggcctagc agtcctcgag gctgttgctg
     1981 ggcaagtagg atttgcttat gagattgagg agagagcttt tggtggtgct ggtattgatg
     2041 cggctgacca tcctctacca gatgctacct tgcaggcttg ccgtcaggca gatgcgattt
     2101 tattggcagc aatcggtagc cctcaatatg acaatgcggc tatccgacca gaacaaggcc
     2161 tgcttcaact ccgtaaggaa ttgggtctat ttgccaatat tcgtccggtg aaaatttttg
     2221 atagcctgaa agactattct cccctgaaag ccgaccggct ggacggtgtg gatttggtca
     2281 tggtacggga gttgacaggc gggatttatt ttggggagca cattcttgag acagaccaag
     2341 ccagcgatag caatacctat caagctgagg aaatcgaacg agttgtccgc tctgcctttg
     2401 acctagccca aaaaagacga aaaaaagtca ccagcattga taaacaaaat gtactggcga
     2461 cgtcaaaatt atggcggaag gtggcggatg aagtggctaa ggactaccca gatgtgacct
     2521 tggagcacca gttggtggat agtgcagcca tgcttttgat taccaatcct agtcgatttg
     2581 acgtcttggt gacggaaaat cttttcggag atattttgtc ggatgaggcc agcgtattaa
     2641 cagggacgct aggggttctg ccttctgcta gtcatgcggt ggcaggtcct agtctttatg
     2701 aacctatcca tggttcggca ccggatattg caggtcaggg cattgccaac cctgtcagca
     2761 tgattctatc tgttgccatg atgctggaag aaagttttga tttggtccaa gcaggtcaga
     2821 ccattcgcca agccgttgaa gcggtctttg cagaaggcat tttcaccaag gatctgggtg
     2881 ggaccgcctc taccaaagaa atgactgagg ccattattgc ccagattgga ggtgggtaga
     2941 tatgagtggc aaatccattt tcgataagct ctgggatcgc catgtgatta cagggcagga
     3001 aggtcagccc cagctcctct atgtggacca gcactatatc catgaggtga ccagtcccca
     3061 ggcctttcaa ggactgaggg atacagggcg acctgttcgg cgtccagact tgacttttgc
     3121 gacttttgac cacaacgtac caaccgttga tattcacaat atccgtgatg tcatttccaa
     3181 ggctcagatg gatgccttgg cgaagaatat agaggatttc ggcattcccc acgcagccca
     3241 cggttcggaa catcagggga ttgtccacat ggttggacca gaaacaggta ggacacagcc
     3301 aggtaagttc attgtctgcg gagatagcca tacagcgact cacggagcat ttggagctat
     3361 cgcatttggg attggtactt ctgaagtaga gcacgttctc gctacccaga ccatttggca
     3421 ggttaaacct aagcgactcc tagtggaatt tgtcggtcag gctcaaaatg gtgtctatgc
     3481 caaggacttt attctggctc tgattgcccg atacggcgtg gattgtggct tagggcatgt
     3541 ggtggaattt gcagggccag tcatcgaccg actcagtatg gaggagcgga tgaccatttg
     3601 caatatgtcc attgagttcg gttctaagat gggcattctg gctcctgacc agaccacttt
     3661 tgactacctg cgaggtcggg agtgtgcacc agcggacttc gatgcggcgg tggcagactg
     3721 gaaggagctc tactcggatg cggacacggt ctatgacaag catctagtcc ttgatgtgtc
     3781 agacttggca cccatggtca cttgggggac cacacctgct atgggggtta gctttgacga
     3841 aatcttccca gccatccgtg accacaacga cgagcgggct tacgcttaca tggacttggc
     3901 tcctgggcaa aaggctgcgg acattcccgt tggctatgtc ttcctaggct cctgtaccaa
     3961 tgctcgcctc agcgatttgc agctggcagc tcggattgtt aaggggcgga aaatagcaga
     4021 gcaggttacg gctattgtcg tacccggcag tcgccctgtc aagcgtgctg cagaaaagtt
     4081 aggtctagac aagattttta tggaggctgg ttttgagtgg cgggatcccg gttgctccat
     4141 gtgtctgggc atgaatccag ataaggtgcc tgcaggtgtc cactgtgcct ccacaagtaa
     4201 tcggaacttt gaagaccgac agggctttgg ggccaagacc cacttgtgta gtcctgctat
     4261 ggctgccgca gctgcgcttt atggacactt tgtcgatacc cgacagctag acattctcaa
     4321 ggagggagtc taatgcacca atttaccata tggacaggga cgactgttcc gctcatgaat
     4381 gataatattg ataccgacca gctcttgccc aagcagtttc tcaaactgat tgacaaaaag
     4441 ggcttcggca agtatctgct ctatgcttgg cggtacttgg atgataacta cacggacaat
     4501 cctgatttca ttatcaatca gcctgagtat caaggcgcta gtatcctcat atctggggat
     4561 aacttcggag caggttcttc tagggaacac gctgcttggg ctctggcaga ttatggcttc
     4621 aaggtcatca ttgcaggctc ctttggggat attcattaca acaatgactt aaataacggg
     4681 atattaccta ttatccagcc caaagaagtc agggatcaac tagctcagct gggtcctgac
     4741 caagaaatca cggttgactt ggcagatcag ttgatacgga cgccttttgg ggaattccca
     4801 tttgacatcg aacaggactg gaaacacaag ttgctcaatg gcttagacga tatcggtatt
     4861 accttacaat atcaggattt gattactgag tatgagggga atcgcccaag ctactggcaa
     4921 gaataaaata aagattagaa aacaagcaga ttgctctgct atggaacaaa agaaaagagg
     4981 aaactattat gacgaaacaa attcactggg atagcgcact ttcacaagaa ggatttgaca
     5041 ttatcaaggg ggagggaggc gtgattgtct gcccgacgaa ggttggttac atcatcatga
     5101 ctgctgacaa ggctggcttg gagcgtaagt ttgacgctaa agagcgtaag cgtaataagc
     5161 cgggcgtggt cctttgtgga agcatggagg agcttcgtga gttggctcag ttgactcctg
     5221 agattgatgc cttctaccaa aaacattggg atgaggacat tttgttgggt tgtatcctgc
     5281 cttggaaacc agaggcttat gctaagttgc aggcttatgg cgatggtcgt gaagagttga
     5341 tgaccgacgt tcgtggcact tcttgctttg ttatcaagtt tggtgtagca ggcgagcaga
     5401 ttgccaagga aatgtgggaa aaagaaggcc gtatggtcta cgcttcatct gctaacccgt
     5461 caggtaaggg aaatcgtggc aaggtagaag gtatcggtga gcgtatcgct tctaaggtgg
     5521 atttgattat cgaggcggat gactatgtgg catctatcca gccagacaag accattgaaa
     5581 cccgctatga gcaaggggtt atggtgtcta tggtagacaa agatggtaaa ctcattccag
     5641 aacaaggcgc ggatagtcgt tctatcagcc cgtgcccagt tgtcatccgt aagggtctgg
     5701 acatcgataa aatcatgatg cacctgtctg accatttcaa ctcttgggac tacagacaag
     5761 gggaatatta ctaagatatc gtcatttagt ttatctttta ttacgtcgtt aactcacctt
     5821 gcctaactcc agttatgcct gcggctcgtt gcctagtact aaaagtaaac taaaagacta
     5881 ttattgagat cgatccgaaa gggtcgtttt ttcgtactca cataaaaaac tggctgaaaa
     5941 tttttcagtc agtttcttat gtttattcaa ttaccaacat gccttcttta acggcaaatg
     6001 ggtgttctgg gtcaatgcgg tcgtagaaca tgacaccgtt gaggtggtcg atttcgtgtt
     6061 ggaccacgat ggcattaaag cctttgagtt tgatacggtg tgtttctcca tttttgtcca
     6121 tgtaatcaac agtcacgcgc gcgtggcgga ctacatagcc ttggacttcg cggtcaacgg
     6181 ataggcagcc ctcgccccct tccatagcag cttcttggac agaatgtgcc acgattttag
     6241 ggttgtacat gacttcttgt agagagtagg cttgggcagg tgggttgcct tcttcatctt
     6301 ctggatttgg gactaagaca gcaatgatgc gtttggaaac gtcaatctga ggtgctgcta
     6361 gaccaactcc gccacggagt ttcatttttt cagccatgac tggatcctgc gaatgtttga
     6421 ggaattgcat cattttttcg cccaaaataa tttcctgatc agatagagga aatgcaactt
     6481 cttcggcaac ttggcgtagg gttggatgcc cttcacggat gatgtcatcc atgtcaatca
     6541 aatgggcagc ttttgtcaat cgttcaataa cagacatgat tctctccttt gaatatagtt
     6601 aagataagta tagcatgaaa tgggagagaa taaaagtcag acttttctat ccattcgctt
     6661 tcaaatctgt tatactagta aaagacgaac gttgaaaggg agaaaaatga aaagaatttt
     6721 agaaaaagcc agtttgctgg ccctatccac catgctggtt tcgacatttg ctgtctcgcc
     6781 agctattcca cagatgattg agcattttgc ccagcaggga attgcagcgg cccaggtgga
     6841 aaacttgatt acggtgacct cttttgctat tatggttact ctattggcaa atggtctagt
     6901 tgtccgtttt ttgtctgaac gaaacattat tattgcaggt cttttgctta tggccatcgg
     6961 tggagcattg cccatgtttc taactgctta tcctctgatt ttattggctc gtatcttgct
     7021 tggtttgggg attggcctaa ttaatgcgcg tgctattaat atcatcggta attttttcac
     7081 cggtcaggag cgggtgcaga tgatgggctt gcgtggttca gcagaggttt tgggaagcgc
     7141 agggcttacc ctccttgtcg gttggttgac ccagtttggt tggcaacctg ccttcttggt
     7201 ctaccttttt gccttggtca tcttggctct cttccttctc tttgttccca aggaggaatt
     7261 gctggctcgc atggaggtaa aggttgagga gaacgcgccc aaggtcaagc tggataagac
     7321 tatgtggatg atgggcattt atctggcatt cttagctttc tttgttatca atgtcaatgc
     7381 cttcctgacc attcgcattc ctcagattgt tttagccaag ggcatcggta ctgctcagca
     7441 agccagtctc attctcagtc ttatgcaggt catggggatt gtggcaggga cggtctttag
     7501 tagcttggtt ggtcgtttga agggttggct tttagctgtt tcctacgtgg tatttggact
     7561 cgcggttgtc ggcattgcct ttgcggataa tctctgggtg ctgggactcg gtggcatggt
     7621 gtcaggattt ttctacagca tcattctaac cattgtcttt agtcaggtaa cagaccgtgc
     7681 acccaaggcc ttgctcaatg cggtcatgac aatcgtcctt atgggctgca atatcggcgg
     7741 tgcgacatct gctatcttac cgacttatct ggaaaaactc aacccaaccc caacaggtgc
     7801 ctttggtatt tacgccatcg gctgtgcctt gataagcgca ggcttgattt ataaacaact
     7861 gaagaagtag gagcggattt ccgctccttt ttggtataat attcttatgt tagaaaataa
     7921 ccgcttaaat gaattaatac tacgttttcc cgaggatgtt cagttgattt ttaaggacat
     7981 gattccctcc tatcagttgg gctatgtgga ttatgtttat cagacagata gttacgccac
     8041 ccaaaaccgt cggattaaaa atttggcaaa aaatttccga agaatggatt acttttacat
     8101 catgcccctg ccccaggatc tggcattgga aattgctaac caatggcgct atcaaccacc
     8161 tttggatgcc tatacgatta gtgcaaaccc cgagacttat gctgagatga tctcaccaga
     8221 ggcgcgtggg gaccgctttt ttgcagtcat ccgcaatgcc gccctcatgg gctatttctg
     8281 tattgaccaa gatggcgaga ccgttgacat tcgtttgggt atgaaacctt ctttgacagg
     8341 tcagggaaat ggcagagctt tctatcaggc tattgaagac tatttagtag agcatgttca
     8401 gccagctagt atcaaactga cagttgctag ctctcatcaa gttgctcaaa aactctttca
     8461 tgctcttggt tttacagaaa tagaaaagca atcagaatat atcaaaatgg aaaagaaact
     8521 cgtatgcgat tagataaatt tttagtggat tgcggtgttg gcagtcggac agaagtcaag
     8581 aaactcctga aaaacaagca agtcacagtc aacggccaag tagaaacctc cccaaaacag
     8641 cagattgatg aaaaaaaaga ccagattgca gtagcaggtc aggtccttag tcatgaaacc
     8701 tttgtttact atctgttaaa caagcccaag ggtgtgattt cagccacgga ggatgaccgt
     8761 catcggactg tcttggacct gctagataat acagctcgcc agaaggaagt ttttcctgtt
     8821 ggacgcttgg acatcgatac ccatggcttg ctcctcttga ccaacaacgg tcagctggct
     8881 catgccatgc tttctccgaa aaaacatgtt gataaactct accgtgcaca ggtggacggg
     8941 atcatgaccc aagaggatgc cgaacgattt gcggcaggaa ttgagctgaa agactttacc
     9001 tgtcaaccag cccagttgac catcctctct acagatgaag ctaagcagac ctcgctcgtt
     9061 gacatcacca tccgagaagg gaaatttcac caggtcaaac gcatggtgca ggcctgtgga
     9121 aagacggtga cagacttgca acgattgacc atggggccac ttgagttaga tccagtgcta
     9181 gctcttggag aataccgcag gttgactgct gccgagttaa agcaattaga agtctttggt
     9241 gtggaattat agataattgg ttccttgatt gccggtgttt ttggtgctgg tccaaataca
     9301 gccttctcac aaaacgttgg cctcattact ttgacaaaag ttgctagtcg tcatgtcatg
     9361 attttagcag gtattatctt aaccctactt ggtgtctttc caaaattatc tgccttgatt
     9421 tccatcatgc ctcagcctgt tcttggtggt gttgggatta tcatgttcgg tttggttgct
     9481 gcccaaggga ttaagactct tgcaactgta aaaattggtg accgtgagct cttgattatt
     9541 tccattgcct ttgcgcttgg gattggagtg actgttcgtc cagaattatt gagtcatctt
     9601 ccatcagctc ttcaaatggt cttctcatca ggtatttcaa cagggaccct ggctgccttg
     9661 gtgttaaatc tggtgttaaa agaggaaaaa taagagttat tttattagtt tgcttagatg
     9721 aaaagagaag aagatccatc tgtggtcttc ttctttttgg ggtaagtaaa aaatgctaag
     9781 ggtgtacagt tgtcgtatct gaaattctag cccctacttg accgtacttg gtataacata
     9841 ttacaatata tataagaacc tgtgttcaca gttcatcgct ttcattggag tgtttgatgg
     9901 tggagataag gaaaggagat tcctgaccaa ttaggtggta ggtgaaaaca gccacaggag
     9961 ctttttactc gtcgaagcaa taaagtgaaa ctaaatggtg atagagtcaa gtattccttc
    10021 aaaaaattgc cttgatgagc aaaaacgatt tcttgcataa gaacactttg tttatgaata
    10081 taggttctaa gatttgtcca agagaggtta ttatatgttg aaatatatcc gtgcctttcc
    10141 ccttgttata gtagcgggag cggttgttta ctttactatt tttatctgta ttgataatgg
    10201 tgattggacc tacgttgtga ctagagcgct agggcttaag gaagaacatg ccaataatgt
    10261 ttctttgatt gtaattggtg cccaatcact ttttctaact tcggattggt tttacaagcg
    10321 gattcgtgcc tttctcaatc gtcgtttgga aaaggccaaa gggcttaatc gacagattta
    10381 tctgggctat aaggcaggga ttgagttttt gatggcgtta cccaaacgaa ctattttatt
    10441 cacattctat ctacttttag tagttgctga aagtgttggt ctgattgaaa aagccaagga
    10501 ctatgctgcg gtaatcatct tcataattgc tgttgaccgc gtgaccaaaa tctggccgga
    10561 ggaaaagcgg cgaatgattg agtttagcca gaagattaag aaacggatta agagtgtggg
    10621 ataagtcaag attaaatatt ttaagaagac agctatgtct tcttttttt
//
LOCUS       DASFQD010000085        10322 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.086, whole genome shotgun sequence.
ACCESSION   DASFQD010000085 DASFQD010000000
VERSION     DASFQD010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 10322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10322
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.086"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..1550
                     /locus_tag="U1021_001620"
     CDS             <1..1550
                     /locus_tag="U1021_001620"
                     /inference="COORDINATES: protein motif:HMM:NF024753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEM4712140.1"
                     /translation="ENPQDGYVVFYSEVKQEYGIIKFNIFTGEVLWTQSVVNGGYGTP
                     LVYKNLVIVLKEFDSIAAFSKEDGKFIWEYRGCGRVRSSLNIIDDKIVFSSSNIIYFI
                     TEDGKLDFKIEKENSFFFGTISLFNGYLLTMYTKNDALTQTSHIVIGGLNLDGGALFE
                     VDLGESYIISADTSGFFLSDDSIFVSCGEIVFNINANSGSILWEQRISGIAGRHLPVV
                     DSNNVYTTTLSGNIYCINKKSGEIDWIIETKEGSIVAPPSIFRKTLLVLADCSMYFID
                     KVTGRIYDRKVIGHSPYSAITIQSNCIIVGGGEPPAHGLLQGYQVSADYPDELLINHF
                     EIGDIVENNELQVLIKVDSDDIENIKMFPAVISQKEILIGDRIGESKIFSFLVPLKNN
                     NVKGMYCVPLKVTFKSGLEKIEPIIIGLSSNNLLPSSFKLNHLYRNIQQSDYYNSGAA
                     IAEFLFSIYGKDMKQDEFRKIIDYIKERSKWKDADFQTWRLVLKRALSSPATTLEEFI
                     INEEGIE"
     gene            1547..3121
                     /locus_tag="U1021_001621"
     CDS             1547..3121
                     /locus_tag="U1021_001621"
                     /inference="COORDINATES: protein motif:HMM:NF012235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712141.1"
                     /translation="MNKKRTISFFRQLIKSIGITQVCIYVGIIVILFLLIGIQPFLIS
                     ELFSFTKSTIDYTYLFLLLLSFLSVSFVAFPKNYMLQKVRKVSKSIVFKDISDKSYSK
                     FVDMNLGEVQNLASEISYSARSLQYESISFILNVILIISLYAFSLITYDIFIGGVYIL
                     FCSLYLWLSIVFSKDNVRLIQDALDSTSETNSFFVDYFQNVEVIISTFRQFFETKKYD
                     TILSKEQKTYFNLQKRIDSHQLLLQLILSVMTVVMIVLVLNKSSDGSMAYILVLVYSS
                     IHMNGFGKQFLSVLESLDRLDLALDKIDFGRVNKVSISYENTDTDSLISLKNVQFSHG
                     DKKIFDNLTFSIRRGKFILIRGKNGTGKSTLLKLIKGMITPDSGSVTHYLSSEQIGYL
                     SQKMTLFDRTLKENMIYPLDKVDDALLMNLIAELKMTTLIQDVHGWSERKPGDFGDKL
                     SGGEKQKILIARGIINQYEVLLLDEIDSALDLEMQTQLMTILKKYYQNKTVVMVSHRK
                     IEESFFDDIIDIETIN"
     gene            3511..4350
                     /locus_tag="U1021_001622"
     CDS             3511..4350
                     /locus_tag="U1021_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4712142.1"
                     /translation="MIKLIATDMDGTFLDGEGSFDRQRFAAILAQLAERKIPFVIASG
                     NGIERLRQLCEGFEEDLIFVADNGTHIYQGGETRLRRGLTQQESGMVLSYFKGQWATI
                     CLMLGNDHHIYMQEGAGVPFEGTGLPIKPEQMKAFQDRVVQLEDLAAYPTDQPIFKAG
                     FWVPEEQVDELVGGFNRQYAGQLMAVTSGYGSVDILPAGIHKAWGLEQVLQDLGIQAE
                     QVMAFGDSDNDLELLAYAGHSYAMENATDKVKAVAKYRAPSHLEAGVMQVLENWLSET
                     KGE"
     gene            complement(4428..5210)
                     /locus_tag="U1021_001623"
     CDS             complement(4428..5210)
                     /locus_tag="U1021_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 family transporter protein"
                     /protein_id="HEM4712143.1"
                     /translation="MKKYISLYLYNIKVYMMAQMSFRVDFFIGLFSSLIEQIVYLIFL
                     NILFGNIKEIAGFNYGQMLFIYGIATVGRSIHLIFFDNLWMFGSRYIRQGEFERLLLM
                     PVNPLFQLICERIQPQGIGTTLIGTLALAQASKELGMEWSLGKLALLIFIAICIGLLY
                     AAIQLGPTALAFWIVESFPLTMGIFALNQMAQYPLNIYPKIIQILLIFVFPYAFTAYF
                     PALYFLDLSMWGLALPLVVLVLFTINYKLFRYGMTKFTSVGN"
     gene            complement(5212..5991)
                     /locus_tag="U1021_001624"
     CDS             complement(5212..5991)
                     /locus_tag="U1021_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 family transporter protein"
                     /protein_id="HEM4712144.1"
                     /translation="MRKYLYMTRLTMMNAMQYKAFFLATFVSLTVKILVALYVWKTIF
                     FTQSEVNGFTLQTFTTYIIFANLLANLNSFSLGEDLSYSIIKGSIAGEFLRPYSFILA
                     LFFKDLGNKLLELIKFAIVFIGIILVHQDFYLPDGKTILLFLVSSILGMFIVQLLDMA
                     FGFLAFFTVNAWGVMLLRMGLFNLASGALLPLSFYPQAVENFLKLLPYNYAVNVPVSI
                     LLGQESDLTALGLQVIWIPILACFIALLWSQAKRRIVIFGG"
     gene            complement(5984..6967)
                     /locus_tag="U1021_001625"
     CDS             complement(5984..6967)
                     /locus_tag="U1021_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM4712145.1"
                     /translation="MIQAEHLSKTYSIIDKEVGLKGSIKAFFKPKKKSIPAVQDISLQ
                     VGKGEIIGYIGSNGSGKSTTIKMLTGVLYPDQGSVRINGLNPQENRKAVNKQIGVLFG
                     QKSHLDWNLPVQESFILHAKIYDVPDKVFKERLAVLIELLDLADIMKQPIRNLSLGQR
                     VRCEFAAIFIHQPAVVFLDEPTIGLDASVKETIRSFIRYMNQEYQTTFLITSHDMKDI
                     ESLCERIFIIDKGKKVYDGSLTVLKERFSTVKTILFSTEKPIEKDLQLEGWEFIRKDD
                     FHFEIHYQSKVWTSAQVIEQVFNHYAIEDVTMKELEIETMVRQIYEEGIHA"
     gene            complement(7052..7585)
                     /locus_tag="U1021_001626"
     CDS             complement(7052..7585)
                     /locus_tag="U1021_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM4712146.1"
                     /translation="MGTDNRKERTRQAILEAMVTCLESQGFNDITTTHLAQTAGISRS
                     SFYTHYKDKYELIDSYQQGLFHKLEAIFDRYDGNRQSSFLEIFELLYREKLLSALLTH
                     NGTQEIQNFLINKVRLLVANDLAERLGKENLSQLEKEYSSIYFSHAFFGIMQVWIKNG
                     KQESPQYMTDFLIKMLP"
     gene            7711..10170
                     /locus_tag="U1021_001627"
     CDS             7711..10170
                     /locus_tag="U1021_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhgE/Pip domain-containing protein"
                     /protein_id="HEM4712147.1"
                     /translation="MLQKVKNIFKKPMTLVTIIGIACVPALYNISFLTSMWDPYGRLD
                     QLPVAVVNQDQSASFQDKNLTIGDDMVDNMKESKSLDFHFVSEKNAEKGLEEGDYYMV
                     ITLPKDLSEKASSLLTNQPEPLTISYQTSKGHSFVASKMGESAMEKLKTSVSETITKT
                     YTTAVFDSMREIQTGMVEAADGSQQLTDGASQLESGSQTLSNGLTTLTTSGQALVTGA
                     NQLAAGVVSYTDGVNQAATGSQTLSSGLTTYTNGVASLASGAEQLNANSSQLIAGVGQ
                     LQSGASQVEQLVTGANQLQAGLEQLASSTSLSAEQSSQIQALLTGLPQLQAAINQLND
                     SLSSIGGLTVDTSSLSNLLTEMGSQTQGLLTAAQADKTASIEALQATATYQNLTADQQ
                     AELVGALQNSSSATATVAQTILGQLSQLSQALSSLQSLSGMATQMSQLQSAVGQINTA
                     ANQALPGATTAIENLSSGLSQVNTALNQQVLPGTQALTSGVSQLQTQLSNGASQLMSG
                     VTAYTAGVAQLAEGGAQLVANNSSIQSGGGQLTSGLATLASNSNQLVSGSGQLASGSQ
                     QLIAGAEQLASGGQTLTSGITSLRTGSETLTNSLSSASQQLSVVSVEDKNAQAVSQPV
                     TLEHSDQDDVKTNGVGMAPYMVSVALMVAALSANVIFVKHIDNRSYKNRWDWAKGKLL
                     LNGIIASLAAVILYGVLRLIGIEPAHPMATLGLILLASWTFMALVTALVGWNNRFGSF
                     ASLIILLLQLGSSAGTYPIELSPRFFRVIQPYLPMTYSVSGLRQTISMVGNSSHQVWI
                     LSLFLVGFMGLGLLIYNQKDE"
BASE COUNT         3242 a         1761 c         2247 g         3072 t
ORIGIN      
        1 ctgaaaatcc acaagatgga tatgtagtat tttattcaga agttaagcaa gaatatggta
       61 ttataaagtt caatattttt actggtgaag ttttatggac acagagtgta gtcaacggag
      121 gatatgggac acccttagta tataaaaatt tagttattgt attgaaggaa tttgattcta
      181 ttgcagcatt ttcgaaagaa gacggaaaat ttatttggga atatagaggg tgtgggcgag
      241 tacgaagttc acttaatatt attgatgata aaatagtatt ttcttcaagc aatataattt
      301 attttataac cgaagatgga aaattagatt ttaaaataga aaaagaaaat tctttctttt
      361 ttggaacaat atctttattt aatggatatt tattgacaat gtacactaag aatgacgcat
      421 taacgcaaac atctcatatt gtcataggtg gtctcaatct tgatggagga gctctttttg
      481 aagttgattt gggcgagagc tatattatta gtgcagacac atctggtttt ttcttatcgg
      541 atgatagtat atttgtttcc tgtggagaaa tcgtattcaa tatcaatgct aattcaggaa
      601 gtatactttg ggaacaacga atatcaggta tagcagggag acatttaccc gtagtagata
      661 gtaacaacgt ttatactaca actctgtcag ggaatatata ttgtataaat aaaaaatctg
      721 gggaaataga ttggataata gaaacaaaag aaggttcaat tgtggctcct cctagtattt
      781 ttagaaaaac tcttttggtt ttagctgatt gttcaatgta ctttattgat aaggtaacag
      841 gtagaatata tgatcgaaag gtgataggac actctcctta tagtgcgatt acaatacaaa
      901 gtaattgcat aattgtgggc ggtggcgaac caccagcaca tggtttatta caaggatatc
      961 aagtatctgc agattaccct gatgaattgc tcataaatca ttttgaaata ggagatattg
     1021 tagaaaataa tgagttacag gtactgataa aggtagatag tgatgatata gagaatatca
     1081 agatgtttcc agcagtaata tctcagaaag aaattcttat aggtgatagg ataggagaaa
     1141 gtaaaatatt ttcattttta gtccctctca aaaataataa tgtaaaggga atgtattgtg
     1201 taccacttaa ggttactttt aaatcaggac tagagaaaat agagcctata attattgggt
     1261 taagttctaa taatttatta ccaagttctt ttaagttaaa tcatttatat cggaatatac
     1321 agcaatcgga ttattataat agtggagcgg caattgctga atttttattt agtatttatg
     1381 gaaaagatat gaaacaagat gagtttagga aaattattga ttatataaaa gaaagaagta
     1441 agtggaaaga tgcagatttt caaacttgga gattagtttt aaaaagagca ttgagttcgc
     1501 cagcaacaac tttagaagaa tttattataa atgaagaggg gatagaatga ataaaaagcg
     1561 aacaataagt ttttttagac aattaattaa aagtatagga attactcaag tttgtatcta
     1621 tgtaggcatc atagtcattt tattcttatt gataggaatc cagccttttt taatatctga
     1681 acttttttca tttactaaat caactataga ttatacttat ctattcttac ttttattatc
     1741 atttttatct gtatcatttg tagcgtttcc gaaaaattat atgttgcaaa aagtcagaaa
     1801 agtttcgaaa tctattgttt ttaaggacat atcagataaa agttattcta agttcgttga
     1861 tatgaattta ggagaagttc aaaatttagc atctgaaatt tcatactcag ctagatcgct
     1921 acagtatgaa agtattagtt ttattttaaa tgttatattg attatctctt tgtacgcatt
     1981 ttcgcttata acctatgata tttttattgg tggcgtttat atattatttt gtagtcttta
     2041 tctatggcta tctattgtat tttcaaaaga taatgttcgc ctgattcaag atgcgttgga
     2101 ttcaactagt gagaccaatt ccttttttgt tgattatttt caaaatgtag aggtaattat
     2161 ttctacattt agacaatttt ttgaaactaa gaaatacgat acaattttaa gcaaagagca
     2221 aaaaacatat tttaatctac aaaaaaggat agatagtcat cagttattgt tacagttaat
     2281 tctatcagtt atgactgttg tcatgattgt attagtatta aataaaagta gtgatggtag
     2341 tatggcttat atcctagtct tagtttactc atctattcat atgaacggat ttggcaaaca
     2401 atttttatct gttttagaat ccctagatcg attagattta gctttagata aaattgattt
     2461 tggtagagta aataaggtat ctatatcata tgagaataca gatacagata gtttgatttc
     2521 tttaaaaaat gttcaatttt cccatggtga taagaaaatt tttgataatt taacattcag
     2581 cattcgaaga ggaaaattta ttttaattag aggaaaaaat ggaacgggaa agtcaacttt
     2641 attaaagtta ataaaaggga tgattactcc tgattctgga agcgttacgc attatttatc
     2701 ttcagaacaa atagggtatt tatcacaaaa gatgacttta tttgatcgta ctttgaaaga
     2761 gaacatgata taccctttgg ataaggttga tgatgccttg ttaatgaacc taatcgcaga
     2821 attaaaaatg acaactctta ttcaagatgt acatggatgg tctgaaagaa aaccaggtga
     2881 ttttggggat aagttgtcag gtggggaaaa gcaaaagata ttgattgcca gaggtataat
     2941 caatcaatat gaagttttat tattggatga aatagattct gctttagatt tagaaatgca
     3001 gactcaatta atgactattt taaaaaaata ttaccaaaat aaaaccgtcg ttatggtaag
     3061 tcataggaaa atagaagagt cgttctttga tgatataatt gatattgaaa cgattaattg
     3121 aaattagaat aaacattagt tgttcgagtc aattttttag tgactataag attattcata
     3181 gtggtaataa aattattcga ttgcattggt gaagttaatt ctcaatactc acaggtatgt
     3241 cccaaaagaa tagttagatt ttattggggt agtgatatag accacggagt aactttggat
     3301 gaactaaaaa atttattgat aactaaagat attaagaaat gtcgaaaaaa tacactttac
     3361 attcttcggt agcattaaaa agcctctctt aatttttggg gattatgttt catgctaact
     3421 gtgtggtgta ataaaagaaa ttatactagg atttaagatg cacaccctac atggtttttg
     3481 cacccccttg aaagggaaag gttagattgt atgataaagt tgattgcgac agatatggat
     3541 gggacgtttt tggacggaga agggagcttt gatcggcagc ggtttgcggc tattttggcc
     3601 cagctggctg agcggaagat tccctttgtc atcgcgagtg gcaatgggat tgagcggttg
     3661 aggcaactct gtgagggctt tgaggaagac ctgatatttg tcgcggataa tggtacccat
     3721 atctatcaag ggggagagac acgtttgagg cgaggcctga cccagcagga gtcgggcatg
     3781 gtattatcct atttcaaggg acagtgggcg accatctgtc tcatgctggg caatgaccat
     3841 catatctata tgcaggaggg ggcgggtgtt ccctttgaag ggacgggcct tcctattaag
     3901 cccgagcaga tgaaggcctt ccaggatagg gtggttcagc tggaggactt ggcggcctat
     3961 ccgacagacc agcctatctt taaggcgggc ttctgggtgc cagaagagca ggtggacgag
     4021 ctggttgggg gctttaaccg ccagtacgca ggtcagctga tggcagtgac cagtggctat
     4081 ggctcggtgg acattttgcc ggcggggatc cacaaggcct ggggcctgga gcaggtctta
     4141 caggacttgg gaatacaggc agagcaggtc atggcttttg gagattcgga caatgatttg
     4201 gaactcttag cctatgctgg gcattcctat gccatggaaa atgcgacaga caaggtcaag
     4261 gcagtagcca agtaccgagc tcccagccat ctggaggcag gggtcatgca ggtcttggaa
     4321 aattggttgt cggaaaccaa gggagagtaa aaaatccttg agtattttta tatatcctca
     4381 tgctctagta taaaaaacaa ggtctctcaa gcactgagag ccttgtttta atttccaaca
     4441 ctggtgaatt tggtcatacc atagcggaag agtttgtaat tgatggtaaa taagactagg
     4501 acaaccagtg gcagagccag tccccacata gacaagtcta agaagtagag ggctgggaaa
     4561 taggctgtaa aagcataagg gaaaacaaat atcagcagga tttgaatgat ttttggatag
     4621 atattgagtg ggtattgagc catctgattg agggcgaaaa ttcccatggt caaaggaaat
     4681 gattccacaa tccaaaatgc tagagcggtt ggaccgagtt gaatggctgc atagagtagc
     4741 ccgatacaaa tggcaataaa gattagtaag gctagttttc caagactcca ttccataccc
     4801 agttccttgg aagcctgggc tagtgcaagg gtaccgatga gggttgttcc gattccttgt
     4861 ggctggattc gttcacagat aagttgaaaa agtgggttca caggcatgag gaggaggcgt
     4921 tcaaattcgc cttgtcggat gtagcgactg ccaaacatcc agagattgtc aaagaaaatc
     4981 aagtgaatgg agcgtccgac ggtcgctatt ccatagataa agagcatttg accgtagttg
     5041 aaaccagcga tttccttaat atttccaaag aggatgttga ggaaaatcag gtagacaatt
     5101 tgttcaatca aagaggagaa aagcccgatg aagaagtcca cccgaaagga catctgggcc
     5161 atcatgtaga ccttgatgtt atatagatag aggctgatat atttcttcat gttaacctcc
     5221 aaaaatgaca atacgacgct tggcttggga ccaaagtaga gcgatgaagc aggctaaaat
     5281 gggtatccat ataacttgca atcccaaagc agttagatcg ctttcctgtc ctagtaaaat
     5341 ggaaactgga acgttaaccg cataattata gggaaggagc ttcaaaaagt tttccacagc
     5401 ctgtggatag aagctgagtg gcaaaagcgc tccagaagct agattgaaaa gtcccattct
     5461 caggagcatg actccccagg cattgaccgt aaaaaatgct aagaagccaa aagccatatc
     5521 cagtaattga acgataaaca tcccgaggat ggagctaact agaaagagta aaatagtttt
     5581 tccgtcaggt agataaaaat cctgatgaac aagtatgata ccgataaata cgatagcaaa
     5641 ttttatcagt tccaagagct tatttccaag gtctttgaaa aagagagcta ggataaagga
     5701 atagggtctg agaaattctc cagcaatgct tccttttata atgctgtagg ataaatcttc
     5761 tccaagtgag aaagaattta aattggctag tagattcgca aagatgatat atgtagtaaa
     5821 ggtttgcagg gtaaagccat tgacttctga ttgagtgaag aaaatggttt tccagacata
     5881 gagagctacc aaaatcttca ctgtcagtga aacgaaggtc gctagaaaga aagccttata
     5941 ctgcatagca ttcatcatgg tcaggcgggt catgtagaga tatttacgca tggataccct
     6001 cctcataaat ctgacgcacc atggtttcaa tttccaattc cttcatggta acatcttcaa
     6061 ttgcataatg attgaaaact tgctcaatca cctgggcgct ggtccagacc ttgctttggt
     6121 agtggatttc aaagtgaaaa tcgtctttac gaataaattc ccagccctcc aattgcaaat
     6181 ctttttcaat tggtttttct gtggagaaga gaatggtctt cactgtggaa aagcgttctt
     6241 tgaggacggt cagtgaacca tcgtagacct tcttgccctt atcaatgata aaaatccgct
     6301 cacagaggct ctcgatgtcc ttcatatcat gggaagtaat caaaaaggtg gtctggtatt
     6361 cttgattcat atagcggatg aaggagcgaa tggtctcctt gacgctggca tccaagccga
     6421 tggttggttc gtccaaaaaa acaacggcag gctggtggat aaagatagcc gcaaattcac
     6481 agcgaacccg ttggccgagt gacagattac ggattggttg cttcataata tcagccaagt
     6541 ccaatagctc aatcaagaca gccaatcgct ctttgaatac cttgtctgga acatcataaa
     6601 tttttgcgtg aaggataaaa gattcttgga caggcaagtt ccaatccaag tgagattttt
     6661 gtccaaagag aacgccgatt tgcttattga cagctttgcg gttttcttgt ggattaagac
     6721 cattgatgcg gacggagcct tggtctggat agagaacacc agtaagcatt ttgatggtgg
     6781 tggatttacc agaaccgttg gagccgatat agccgatgat ttctcctttt cctacctgta
     6841 aggaaatatc ttgaacagca gggattgact ttttctttgg cttgaaaaag gccttgatag
     6901 agccttttag accgacttcc ttatcaatga ttgaataggt ttttgaaaga tgttctgcct
     6961 gaatcatatc ataatctcct gtttgaaaac gtttgcgtaa gataaggata ttataacata
     7021 ttccccagaa agtggcggaa aaaagtcacc tttagggtaa catttttatt agaaaatcgg
     7081 tcatatattg aggagattct tgcttaccat ttttaatcca tacctgcatg ataccgaaga
     7141 aggcatgtga aaaatagatg ctgctgtatt ctttttccag ttgtgataaa ttctcttttc
     7201 ctaagcgctc cgctaaatca ttggcaacaa gaagtcggac tttattgata agaaaatttt
     7261 ggatttcttg tgtgccattg tgagttaata gggcagaaag taatttttca cgatagagca
     7321 actcgaaaat ttctaaaaat gatgattggc gatttccatc ataacggtca aatatagcct
     7381 ctaatttgtg aaaaagtccc tgttggtagg agtcaattaa ttcatattta tccttatagt
     7441 gggtataaaa actggaacga ctgataccag cagtctgggc taggtgagtg gttgtaatgt
     7501 cattaaatcc ttgtgattcc aggcaggtta ccatagcttc taaaattgcc tgtcgggttc
     7561 gttctttccg attatctgtt cccataattt ctccttttga acatttttag acacagtgtc
     7621 taaaaactgt tcttctgact tgattttgaa aatgatactt gtataatgta ttttatcagt
     7681 ttttggacag tatgtctaaa ggagttgctt atgttacaaa aagtaaagaa tattttcaaa
     7741 aaaccaatga ctttggttac cattattggt attgcctgtg tcccagcctt atataacatt
     7801 agttttctaa cttctatgtg ggatccatac ggccgactag accagcttcc tgtagcagtt
     7861 gtcaatcaag accagtcggc aagctttcaa gataaaaacc tcacaattgg tgatgatatg
     7921 gtggataata tgaaagagag caaaagtctg gatttccact ttgtatcaga aaagaatgcg
     7981 gagaaaggct tggaagaagg ggactactat atggtcatca ctctaccaaa agatttatca
     8041 gaaaaagcat ccagtctttt gacgaatcag cctgaaccac taacgatttc ttatcaaacc
     8101 tccaaaggtc atagctttgt tgcttctaag atgggcgaat cagctatgga gaaattaaag
     8161 acatctgttt cagagacaat taccaaaacc tacacgactg ccgtttttga tagtatgaga
     8221 gaaattcaaa ccggcatggt cgaggcggca gatggtagcc aacaattgac agatggagct
     8281 agtcaattgg agtcaggcag ccaaacactt tcaaatggac tgactacttt aacgacttcg
     8341 ggtcaagcac tcgtgacagg agcaaaccaa ttggccgccg gagttgtgtc ttatacagat
     8401 ggagtcaatc aggctgcaac aggcagtcaa acactgtcta gtggcttaac cacctacaca
     8461 aatggggtag cgagtcttgc ttcaggtgcg gagcaattaa atgccaattc ctctcagctc
     8521 atcgctggag tgggacaatt gcaatcagga gcaagtcagg ttgaacaact tgtaacggga
     8581 gccaatcaat tgcaggcagg cttggaacaa ctcgctagtt caactagttt gtctgctgaa
     8641 cagtctagtc agatacaagc actcttgaca gggcttcctc aattgcaagc ggccatcaac
     8701 caattaaatg atagcctatc aagtatcgga ggacttacag tagatacaag cagtttatcc
     8761 aatctcttga cagagatggg gagccaaact caaggattgt tgacagcagc gcaagcggat
     8821 aaaacagcca gcatcgaagc cttgcaagca acggctacct atcaaaactt gacagctgat
     8881 cagcaagctg aattggttgg tgccctccaa aattcatcgt cggcaacagc gacagtagcc
     8941 caaacgattc tgggtcaatt gtcgcaactc agtcaagcct tatcaagctt acaaagtctt
     9001 tctggcatgg caacacaaat gagccagcta caatcagctg tcggtcagat caacacggct
     9061 gccaatcaag cattgccagg cgccacaaca gccattgaaa acctatcaag tggtttgagt
     9121 caggtcaata ccgccttgaa ccaacaagtt ctaccaggaa ctcaagcctt gacgagtggt
     9181 gtgagtcaac ttcaaacgca attatcaaat ggagcaagtc agctcatgtc aggagtaaca
     9241 gcctataccg caggtgttgc ccaattagca gagggtggag cccagttggt tgcgaataat
     9301 agtagtatcc aatcaggagg tggccagtta acatcaggat tggcaacctt ggcctccaac
     9361 tccaatcagc ttgtcagtgg ttcaggacaa ctggcttctg gtagtcagca attaattgca
     9421 ggtgcagaac agttggctag tggcggtcaa accttgacaa gtggtattac tagcctccgt
     9481 acaggtagtg aaaccctaac aaattcactc agttctgcca gtcaacaact atcagtcgta
     9541 tctgtagaag acaaaaatgc acaagcggtt tctcaaccag tcaccttgga acacagtgac
     9601 caagatgatg tgaagaccaa cggagtcggc atggctcctt acatggtgtc tgttgcccta
     9661 atggttgcag ccttatcagc gaatgttatt tttgtcaaac acattgataa tcgctcctac
     9721 aagaatcgtt gggactgggc caaaggaaaa ctcttgctca atgggatcat tgccagtcta
     9781 gcagcagtga ttctgtacgg tgttcttcgc ttgattggaa tcgaaccggc tcatccaatg
     9841 gcaaccttgg gattaatcct cttagcctct tggaccttca tggccctcgt tacagccctg
     9901 gtgggctgga acaatcgttt cggatccttc gcaagtttaa ttatattgtt actacagctt
     9961 ggctcaagcg caggtaccta tccaattgaa ctcagcccac gcttcttccg agtcattcag
    10021 ccctatcttc caatgaccta ttctgtttca ggtcttcgtc aaaccatttc tatggttgga
    10081 aatagtagtc atcaagtttg gatattgagc ctcttcttag taggctttat gggactaggt
    10141 ctcttgattt ataatcaaaa agatgaataa taataaaacc aactgctcca tgtgaacagt
    10201 tggtttttgg ttgatgtagt tattttgggg ttggtgttcg tagattaatg gttgcgttag
    10261 ttgacgtaat ggtcaggcta ttattactct cttttttctc caaagttaag gtttgtttat
    10321 cc
//
LOCUS       DASFQD010000086        10257 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.087, whole genome shotgun sequence.
ACCESSION   DASFQD010000086 DASFQD010000000
VERSION     DASFQD010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 10257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10257
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.087"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(116..454)
                     /locus_tag="U1021_001628"
     CDS             complement(116..454)
                     /locus_tag="U1021_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF/YmcA family competence regulator"
                     /protein_id="HEM4712148.1"
                     /translation="MSTNIYDIANELERAIRNLPEYKAVEAVKVSVEGNSEAKEILES
                     YISFQKEIQSKLQAGEIPTEADQKKMLDFNKKVQGNPLLTEYFSKQQQLGTYVADLER
                     IIFKPLNELL"
     gene            complement(464..1567)
                     /locus_tag="U1021_001629"
     CDS             complement(464..1567)
                     /locus_tag="U1021_001629"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEM4712149.1"
                     /translation="MKKTILIVGLGLIGSSLALCIRKDHPDYHLIGFDPNEQSCQIAL
                     GKGMVDEVSTELEGVAKQADVILLCVPIQVSLCLIEEFSALELKDTVLITDAGSTKSA
                     IVAAAEEYLAPRKINFIGGHPMAGSHKSGASAADLHLFENAYYIMTPCQATKQDAVPR
                     LTDLLSGTGARFVQIDAAEHDRVTSQISHFPHVLASSLMHQAGEYAQDHPFTNNFAAG
                     GFRDMTRIAESEPSMWTSILLTNADSILNRIEEFQERLSEISDVLRSGDQKAIWDFFD
                     KGRQTRRAMEIHKRAGVDSFYDLFLSVPDEEDTILKVLEVLRGISIVNIRINEENRED
                     IHGILQITFKNKGNLEDAAKRLREQTTYKIHLD"
     gene            complement(1575..2741)
                     /gene="aroC"
                     /locus_tag="U1021_001630"
     CDS             complement(1575..2741)
                     /gene="aroC"
                     /locus_tag="U1021_001630"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002997861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEM4712150.1"
                     /translation="MRYLTAGESHGPRLTAIIEGVPAGLPLTAEDINEDLKRRQGGYG
                     RGSRMQIETDRVEITAGVRHGKTTGAPITLNVTNKDHQKWLDIMAVEDIEEKLKSKRR
                     IKHPRPGHADLVGGMKYRFDDLRNSLERSSARETTMRVAVGAVAKRILAELDIEIANH
                     VVVFGGKEIDVPDGLSVAEIKERAAQSEVSIVNQEREEEIKAYIDQIKRDGDTIGGVI
                     ETVVGGVPAGLGSYVQWDKKLDAKLAQAVVSINAFKGVEFGVGFQAGYLKGSQVMDEI
                     LWSQEKGYTRRTNNLGGFEGGMTNGEALIIRGVMKPIPTLYKPLMSVDIDTHEPYKAT
                     VERSDPTALPAAGVVMESVVATTLATEILEKFSSDNMEELKAAVASHRDYVKNF"
     gene            complement(2744..3418)
                     /locus_tag="U1021_001631"
     CDS             complement(2744..3418)
                     /locus_tag="U1021_001631"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HEM4712151.1"
                     /translation="MKIVVPIMPRNLEEVEAIDVERLAEADIVEWRADYLPKDDILRV
                     APAIFEKCNGKEVVFTIRTTREGGHLDLDDQEYVNLIKEVAALYQPDYIDFEYYSYKS
                     VFEQMLEFPNLVLSYHNFEETPSNYMEIMSELTSLSPAVVKMAVMAKTEQDVLDVMNY
                     TRGFKSLNTEQTFATIAMGELGKLTRIAGVITGSCWTFASLDETSAPGQMSLGNTRKF
                     LEILEN"
     gene            complement(3415..4578)
                     /locus_tag="U1021_001632"
     CDS             complement(3415..4578)
                     /locus_tag="U1021_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HEM4712152.1"
                     /translation="MKIKVNRIAEQKINRGIQLLDSADFSGVSFDEDRLAVLYSESGS
                     YLGQAYLSKQNKGIGWLFSRSNQDLTMDFFVKLFVDAKQKRQHFYQSEMTNAFRLFNQ
                     DGDSFGGMTVDLYDEYAVFSWYNTFIYSVKEMIVAAFQQVFPEVRGAYEKIRFKGLAF
                     ESAHLYGEEAPEYFTVLENGVHYQVFMNDGLMTGIFLDQHEVRGSLVDGLAAGKSLLN
                     MFSYTAAFSIAAAMGGAGETTSVDLAKRSRELSKAHFKVNSLDLDNHHFVVMDVFEYF
                     KYAKRKGLTYDVIVLDPPSFARNKKQTFSVAKDYHKLISQSLEILNTGGTIIASTNAA
                     NVSVEKFKRQIEKGFGVRKHRYEASYRLPADFVINKNDESSNYLKVFTIQVDK"
     gene            4694..6868
                     /locus_tag="U1021_001633"
     CDS             4694..6868
                     /locus_tag="U1021_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HEM4712153.1"
                     /translation="MKKLIDYVKKSGQTRLGFVLILLIIYWLKTLWAYYVDFNLDTQG
                     FFQNFIAIMNPLPVGILLLGLSLYIKNTKAFYSVAMTIYIVLFAWLFSNAVYYREFSD
                     YISISTMMATSSVSAGLGEAALKLFRLWDIVYFLDFIAFGFLVYRKAFHWDKTPFHKK
                     SSFAITAFSVLLFSINLFLAEIDRPELLTRGFSNTYIVRALGLPAFLGYNANQTYNAH
                     KDRSGATASDLEPVKQYITEHYAQPNDNYFGIAKGRNVIYLHLESLQQFVIDYKLNVN
                     GIEYEVTPFLNSLYHSSSTLAFSNFFNQVKAGKTSDAETMIETSLFGLNQGSFMVQYG
                     GSNTQQAAPYILSQNGGYTSAVFHGNAASFWNRNNTYKQWGYNYFFDQSYFSKATAEN
                     SFQYGLNDKIMFADSIQYLEHLQQPFYTKFITVSNHYPYTTSLIGDEIGFPLANTDDE
                     TINGYFATANYLDASIKAFFDYLKATGLYENSVIVLYGDHYGISNSRNPDLAPLIGKD
                     SQTWSDFDNAMMQRVPYMIVVPGMTNGGIFDTYGGEIDALPTLEHLLGIKSDNYLQVG
                     QDLLSSQHSQIVALRTAGSFITPKYTSYEGKIYYTETGLEITNPDETTQKEIDAIKEA
                     TAAQLATSDAIQTGDLIRFFDNGLPALDSSQYNYIDSLAAEIALENKLGTQSTSLYSK
                     NGNKSTIELFKAPSYLELHGSTTATSTPNTGTSSTSTSSTSQ"
     gene            complement(7165..9660)
                     /locus_tag="U1021_001634"
     CDS             complement(7165..9660)
                     /locus_tag="U1021_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pneumococcal-type histidine triad protein"
                     /protein_id="HEM4712154.1"
                     /translation="MKQGKTFLYVAGVSLICAVALMTYQVSNYKEQSSHQKITSIETS
                     QSKQSREIPSDPKKEVPGIDKATDDGFLLTDESQIEEKTDLGIIVNHGDHKHFFFYSD
                     LKNTKWSYLIPENYQEKTHSSQPNRNQRPSGSKQTEDEYIFDPKDIVAEDANGYTVWH
                     GDHYHYILKSSLGGMTHRQLASDSRQSPTVPIIHQQEGIPGIDFQTSDGFLFDGQNIS
                     GVTETGILVRHGKHLHLIHFETLKKSKWSYLVNQYKPNVESDKKSLSEVENTEYQTKL
                     DYLAKELNLEPSRLKKVIVDGQIGLEYPHGDHTHIVLLKEIDTRKPFESPEDRILKQK
                     DGETLEQRKERLIKQYMERFKVKREDITIDGNYMSVRHGDHAHVYKIDPSLPDDPERD
                     VKTETVNLAIEQQSVYGPFYTEGSTENLTRNGVHQKYHPEGLQDIKNFILVTFSTNSD
                     FGDFVVNGKKTKRVYYLVRKDLNWEDLNIAYPQTLQQMGRVFNGWNATLPKSGKMVRE
                     HQSFYADFDTVYRKPTKNIYTPSDDVTNIDLSDYVPVKYSAIANGRLKLNGEIRAGFI
                     YFVKSDLTWKQAKEQGLVVPEPVPSKDYEFIEFRTVITGGEKDTDYVSATTSLAAFGT
                     TAPRIGPYIAENTDNPTDINDPSRHPNYYWHDPKNYVALAFRAGEGGQLQTHLGTSKT
                     VVYLVRKGLTLNQAGIFPPSLKSDTGYKRDYTKPVIPNVAWDTPILEDTAYDIHFDKV
                     ESDSKDGTVEPGDTWLPGNPLPNTPDVPNGEEDADGWLDDLLTPGSEVETITDIETTT
                     EDTKATESSTVAPIDVPKNPSAGEESSEDSIFP"
     gene            10006..10191
                     /locus_tag="U1021_001635"
     CDS             10006..10191
                     /locus_tag="U1021_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712155.1"
                     /translation="MSQPIVPLTIPKSRRFEKKSRNDILMKIRLGKTEVTFFQSINPK
                     IMETILDKVLHYDHPTQ"
BASE COUNT         3030 a         2331 c         1721 g         3175 t
ORIGIN      
        1 tactccccaa agtaccgttt ctgaaactgt acttggagat aagaactcac gtaagcagcg
       61 tatactaggc gtcaattcat ggcctaaccc cctgctccta tcaaatataa atatattaca
      121 acaattcgtt gagaggcttg aagatgatac gttccaaatc agctacatac gttcccaact
      181 gttgttgctt gctgaaatat tccgtcaaaa gtggatttcc ctgaactttc ttgttgaaat
      241 ccaacatttt cttttggtca gcttcagtag gaatctcacc agcctgcaat ttagattgga
      301 tttctttttg gaaagaaata taactttcca atatttcttt ggcttctgaa ttcccctcaa
      361 ctgagacctt aacggcttcc accgccttat attcaggcag gttacggatt gcacgttcca
      421 attcatttgc gatatcatag atatttgttg acataatttt ctcctaatct aaatggattt
      481 tgtaagtcgt ctgctctctt aaacgtttcg cagcgtcttc caaatttccc ttgtttttaa
      541 acgtgatttg taaaataccg tgtatatctt cacggttctc ttcattgata cgaatattga
      601 caatggaaat accccgtaag acttccaaaa ccttcaaaat cgtatcttcc tcatcaggaa
      661 cactaaggaa taaatcgtag aaagaatcaa cacctgcacg cttgtgaatt tccatggctc
      721 tacgagtttg acgtccctta tcaaaaaagt cccaaattgc tttttgatcg ccagatctga
      781 gcacatctga aatttctgaa agacgttctt gaaattcctc gattcgattt agaatagaat
      841 ctgcattggt tagcaaaatg ctagtccaca tgctcggctc actttccgca atccgtgtca
      901 tatctctaaa tcctccagct gcaaaattat tcgtaaaggg atgatcttgg gcatactcac
      961 cagcttgatg catcaaacta gaagccaata cgtgtggaaa atgtgaaatt tgactggtca
     1021 cacggtcatg ttctgccgca tcaatctgaa caaaacgtgc ccccgttcca gataacaagt
     1081 ctgtcaatcg aggaaccgca tcctgcttgg tagcctgaca cggtgtcata atgtagtaag
     1141 cattctcaaa tagatggaga tctgctgcac tggcaccaga tttatgacta cctgccatag
     1201 ggtgtccacc gataaaatta atttttcttg gcgccaaata ttcctcagca gcagccacaa
     1261 ttgcagactt cgttgaacct gcatctgtaa tcaagaccgt atccttcaat tcaagggcac
     1321 taaattcttc aatcaaacac aaagaaactt gaattggaac acaaagaaga atcacatcag
     1381 cctgctttgc tacaccctcc aattccgttg atacctcatc aaccatcccc ttgcccaagg
     1441 caatttggca tgattgttcg ttaggatcaa agccaatgag gtgatagtca ggatggtctt
     1501 tgcgaataca gagcgcaagt gaacttccaa tcaaccctag acctacaatt aaaatcgttt
     1561 ttttcattaa ttacctagaa atttttgaca tagtcgcgat gactggctac cgcagctttc
     1621 aattcctcca tattatcgga agagaacttc tctaggattt ctgtcgctag agttgtagct
     1681 acgactgatt ccatgactac accagctgct gggagagccg ttggatctga acgctccaca
     1741 gtagctttat aaggctcatg agtatcaatg tcaaccgaca tcaatggctt atagagggtc
     1801 ggaattggtt tcataacacc acgaatgatt agggcctcgc cattggtcat accaccttcg
     1861 aaaccaccta gattattggt tcggcgtgta tatccttttt cttgggacca gagaatttcg
     1921 tccatgactt ggctcccttt gagataacca gcttggaagc ctactccaaa ttctactccc
     1981 ttaaaagcat tgattgaaac aacagcctgc gctaattttg catctaactt tttatcccat
     2041 tgcacataag accccaagcc agctggaact cctccaacaa cagtctcaat cactccgcca
     2101 atagtatctc catctcgctt gatttgatca atataggctt tgatttcttc ttcacgctct
     2161 tggttgacaa tggatacttc ggactgggct gcacgctctt tgatttctgc tacgcttaaa
     2221 ccatctggga catcaatttc cttccctccg aaaacgacta catggttagc aatttcaata
     2281 tccaactcag ccaaaatccg tttggcaacc gcaccaacag ccacacgcat agttgtctca
     2341 cgcgcactag aacgctccaa ggaattacgc aaatcatcaa agcgatattt cataccacca
     2401 actaggtcag catgtcctgg gcgtggatgt ttgatacgac gcttactttt gagtttttct
     2461 tcgatgtcct caactgccat aatatccaac catttttgat ggtctttgtt ggtcacattc
     2521 aatgtaatcg gggcaccggt cgtcttaccg tgacgaacac cagcagtaat ctctacgcga
     2581 tctgtttcaa tctgcatccg actaccacga ccgtatcccc cctggcgacg ttttaaatct
     2641 tcattaatat cctcagctgt taaaggaaga ccagctggaa ctccctcaat aatggctgtt
     2701 agacgtggtc catgagactc accagctgtt aaataacgca tacttaattc tccaaaattt
     2761 ccaaaaactt acgagtattg cctaaagaca tctgtccagg tgcagatgtt tcatctaagc
     2821 tggcaaaagt ccagcaggat cctgtaatca cacctgcaat acgcgttaac ttccctagtt
     2881 cacccatagc gattgtcgca aatgtctgct cggtgtttag cgatttaaaa ccacgagtat
     2941 aattcataac atctaggaca tcctgctctg tcttagccat tacagccatt ttaacaacag
     3001 ctggtgacag gctagtcagt tcagacatga tttccatata attagacggt gtttcctcaa
     3061 aattatgata actcaacaca agattaggaa actccaacat ctgctcaaaa accgacttat
     3121 aagaataata ttcaaaatca atataatctg gctgataaag cgctgcaact tctttgatta
     3181 aattgacata ttcttgatcg tccaaatcca agtggccacc ttcacgtgtt gtccgaatag
     3241 tgaaaaccac ttccttacca ttacattttt caaatatagc aggtgctact cttaaaatat
     3301 catctttcgg aaggtagtct gctcgccatt caacaatatc tgcctctgct agacgttcta
     3361 catcaatggc ctctacctct tccagatttc taggcataat aggaactact attttcattt
     3421 atctacctgt atcgtaaaga cctttaggta attactactt tcatcatttt tattgattac
     3481 aaaatcggct ggcaagcgat aacttgcctc ataacggtgt tttctaacac caaaaccttt
     3541 ttcaatctgc cgcttaaatt tttcaacaga aacatttgcg gcgttggtcg aagcgataat
     3601 agttccacct gtatttagta tttccaaaga ttgagaaatc aacttgtgat aatctttggc
     3661 tactgaaaag gtttgtttct tatttcgtgc aaagcttggc ggatccaaga caatcacatc
     3721 ataagtcaag cctttacgtt tggcatattt gaaatattca aatacatcca ttaccacaaa
     3781 gtgatgatta tctaagtcta aactattaac cttaaagtga gctttagaaa gttctcgcga
     3841 gcgtttggct aagtcaacag aagtcgtttc ccctgctccg cccatggcag cagcaataga
     3901 aaatgctgcc gtatacgaaa acatgttcaa aagtgacttg cctgccgcca ggccatccac
     3961 caaggaacca cgtacctcat gctgatccaa aaagattccc gtcatcagtc catcattcat
     4021 aaagacctga tagtgaactc cattttccaa cacagtgaaa tactcagggg cttcttctcc
     4081 ataaagatga gcagactcaa aggccaaacc tttaaaacga atcttctcat aagctcctct
     4141 tacttctgga aatacctgtt gaaatgcagc aacaatcatc tctttgacag aataaataaa
     4201 ggtattatac catgaaaaaa ctgcgtattc atcatacaag tcaaccgtca ttccaccaaa
     4261 actatctcca tcttgattaa ataaacgaaa agcgttcgtc atctcagatt gataaaaatg
     4321 ttgacgtttc tgtttagcat ccacgaataa tttaacaaaa aaatccatgg tcaagtcttg
     4381 attgcttcta ctaaacagcc agcctatccc cttattctgt ttggacaaat aagcctgacc
     4441 caaatagctt ccagactctg aatacaaaac agccagcctg tcttcatcaa atgaaacacc
     4501 tgaaaaatca gcgctatcca agagttgaat ccctctgttt attttctgtt ctgcaatacg
     4561 gtttaccttt attttcatag aattattata acatgtttct tcatatatgc caaaaaaact
     4621 ctaaactttg aggcttattt taaaattatg gtataatgaa ctaaactttt agaaaggacc
     4681 atgaggtttt attgtgaaaa aactaattga ctatgtcaag aagagcggac aaactcgact
     4741 tggcttcgtc ttgattttgc taatcattta ctggctcaaa acactctggg cctactatgt
     4801 tgattttaat ttagataccc aaggattttt ccaaaatttt atcgctatta tgaatcctct
     4861 accagtagga attttattgc ttggtctatc gctttatata aagaatacga aggcattcta
     4921 tagtgtagcg atgaccattt atattgttct tttcgcctgg ctcttttcaa atgcagtcta
     4981 ttatagagaa ttttccgatt atatctccat ttctaccatg atggctacct ctagcgtatc
     5041 tgctggacta ggagaagcag ctcttaagtt atttaggcta tgggatattg tttatttcct
     5101 tgattttata gcttttggtt tcttagtcta ccgtaaggca tttcactggg acaaaactcc
     5161 atttcataaa aaatctagct ttgccatcac agccttttca gtattattat tctctatcaa
     5221 tctcttttta gcagaaattg atagacctga gctactgacg agaggatttt ctaatactta
     5281 tatcgtcaga gcccttgggt taccagcttt ccttggctac aatgctaatc aaacctacaa
     5341 tgcccataag gatcgctctg gggccaccgc ctcagacctg gagcctgtaa aacaatatat
     5401 tacagaacat tatgctcagc cgaatgacaa ctacttcggt attgccaaag gacgaaatgt
     5461 tatctatctc cacctagaaa gcttacaaca atttgttatt gactataagt tgaacgtcaa
     5521 cggtatcgaa tacgaagtca cacctttcct caattctctg tatcattcta gctctactct
     5581 cgccttttct aatttcttca accaagtgaa ggcaggtaaa acctctgatg ccgaaactat
     5641 gattgaaacc tcactttttg gactcaatca aggctctttc atggtccaat atggtggaag
     5701 caatacccag caagccgcac catatattct ctctcaaaat ggtggctata catctgctgt
     5761 attccacgga aatgcagcca gtttctggaa taggaacaac acctataaac aatggggtta
     5821 caattacttc tttgatcaat cctatttctc taaagccact gctgaaaatt cattccaata
     5881 cggtctgaat gataaaatca tgttcgccga ctctatccaa tatctggaac atttacagca
     5941 acccttctat accaaattta tcacagtttc caaccactac ccctatacaa ccagcttgat
     6001 tggggatgag attggctttc cattagccaa tacagatgat gaaaccatta atggctattt
     6061 tgctactgcc aactatctcg atgcgtccat aaaggcattt ttcgattact taaaagcgac
     6121 tggcttgtac gaaaactccg tcatcgtcct ctatggtgat cactatggaa tttctaattc
     6181 acgcaatcct gacttggcac cgttgattgg aaaagattct cagacttggt cagattttga
     6241 caatgccatg atgcaacgtg ttccatatat gattgttgta cctggaatga ccaacggcgg
     6301 gatttttgat acctacggtg gtgagattga tgcacttcct actctcgaac atcttttagg
     6361 aatcaaatcc gataactatc ttcaagttgg tcaagaccta ctttccagcc aacacagtca
     6421 aattgtggct cttcgaaccg ctggcagttt catcacacca aaatacacta gctacgaagg
     6481 taaaatctac tatacagaaa ctggtcttga aattacaaat ccagatgaga caactcagaa
     6541 agaaattgat gcaattaaag aagctaccgc agcacaactg gcgactagcg atgccattca
     6601 aactggtgat cttatccgtt tcttcgacaa tggattgcct gccttggatt caagtcaata
     6661 taactacatt gactcattgg ctgccgagat tgctctggag aataaacttg gtacacaatc
     6721 gacaagtttg tatagtaaaa acggcaataa gtcaacaatt gaactattta aagcaccaag
     6781 ctacctagaa cttcacggta gtacaactgc tactagcaca ccaaatactg gtactagctc
     6841 aacaagtacc agttcaactt cgcagtaata cactaaaaag cttagaatca tgtcagttac
     6901 tacattgatt ctaagccttt ttatactcaa tgaaaatcaa aaacagacta gctccaaagg
     6961 tttggggaac ctttggaggt tggagataga gcgaacgtag ttcgtttcta cttagcatat
     7021 agaaccctgt tactattttg tttcaaggta acaggctgaa aggctccact ggagcctttc
     7081 actcatcaaa tcaagtcaac aacgtctgat tttgattttc gaagagtatt agaccactat
     7141 ttcaaatcac tcatctctat tgcatcaagg aaatatagaa tcctcactag actcttcccc
     7201 tgctgatgga ttcttaggga catctatggg tgcaacagta ctactttctg ttgcttttgt
     7261 atcttctgtt gtagtttcaa tgtctgttat agtttctact tctgaaccag gtgtcaacaa
     7321 atcatctaac cagccatctg catcctcttc tccattcggg acatctggag tattcggcaa
     7381 tgggttccca ggcaaccaag tatcacctgg ctcaactgtc ccatctttgc tatcactttc
     7441 aactttatcg aaatgaatat cgtaggcagt atcttccaaa ataggtgtgt cccatgctac
     7501 atttggaata acaggttttg tataatctcg tttataacct gtatcactct tcaaagatgg
     7561 cggaaaaatt ccagcttggt tcaatgttaa cccttttcta acaaggtaaa caactgtttt
     7621 acttgttccc aaatgggtct gaagttgacc gccttcacct gctcgaaatg caagagctac
     7681 ataattcttt ggatcatgcc aatagtaatt tggatgtcta cttggatcat tgatgtccgt
     7741 tggattatcc gtattttcgg caatatatgg ccctatacga ggagctgttg tcccaaatgc
     7801 tgccaagctc gttgtggcac taacataatc tgtatctttt tctccaccgg taataactgt
     7861 cctaaactcg atgaattcat aatctttact tggaaccggt tctggtacaa caagcccctg
     7921 ctccttagct tgtttccaag ttaagtcaga tttcacaaag tatatgaacc ctgctcgaat
     7981 ctcaccattt aattttaaac gaccattagc tatcgcacta tatttaacag gtacatagtc
     8041 tgatagatca atatttgtaa catcatcact tggagtgtaa atattttttg tcggcttacg
     8101 ataaacagta tcaaaatcag cataaaagct ctgatgttct cttaccatct tgccagactt
     8161 tggcaaagta gcattccaac cattaaagac gcgtcccatt tgttgaagag tctgcggata
     8221 ggcgatgttc aaatcttccc aatttaaatc tttacgaacc aaataataaa ctctcttcgt
     8281 tttcttacca ttaacgacaa aatcaccaaa atcactattt gtactgaatg ttactagaat
     8341 gaaattttta atatcctgaa gcccttccgg atgatacttt tgatggacac cattacgtgt
     8401 taaattttct gttgaacctt ctgtataaaa aggcccatat accgattgtt gctcaattgc
     8461 aagatttacc gtttcggtct taacatcacg ctcaggatca tctggcaaac taggatcaat
     8521 tttataaacg tgcgcatggt ccccatggcg tacactcata tagttcccgt caattgtaat
     8581 gtcctcacgc ttgactttaa aacgctccat gtactgctta atgagacgtt cttttctctg
     8641 ttcaagagtt tctccatcct tttgcttaag aatacgatct tctggacttt caaacggctt
     8701 ccttgtatca atttccttta ataaaacaat gtgtgtgtga tctccatgcg gatactctaa
     8761 tccaatttga ccgtcaacga tgactttctt aagacgtgat ggctctaaat tcaattcttt
     8821 tgctaagtag tccaatttgg tttgatactc agtattttct acctcggaca atgacttctt
     8881 atccgattca acatttggtt tatactgatt cacaagataa gaccatttac tctttttcaa
     8941 tgtttcaaaa tgaataagat gcaaatgttt cccatgcctt actagaatcc cagtttccgt
     9001 tacaccgctg atattttgcc catcaaataa gaaaccatca ctcgtttgaa aatcaatccc
     9061 cggaatccct tcctgttggt gaatgatagg aacagttggc gattgacgac tatcagaggc
     9121 caattgcctg tgtgtcatac cacctaagct tgattttaaa atatagtgat aatgatcccc
     9181 atgccaaaca gtatagccat ttgcatcctc tgcgacaata tctttaggat caaaaatgta
     9241 ttcatcttcg gtctgtttcg aaccagatgg tcgctgattt ctattaggtt gagaagaatg
     9301 tgttttttct tgatagttct caggaattaa ataggaccat tttgtattct ttaaatctga
     9361 gtaaaagaaa aaatgcttat gatcaccatg attgacaata attcctaaat cagttttttc
     9421 ctcaatttgt gactcatcag tgagtaaaaa accatcatct gtcgccttat caatccctgg
     9481 aacttccttt ttcggatctg aaggaatctc tcttgattgc tttgattgcg atgtttctat
     9541 gcttgttatt ttttgatgac tcgattgctc tttataattt gacacttgat aggtcatcaa
     9601 tgctacagca caaataagcg atactcctgc tacataaaga aaagtcttac cttgtttcat
     9661 atcacttttt ctctccttac ttactattat tatattaccg acacgataaa tgtaatcaac
     9721 tattgtaaaa tagcatcacc acatccactt attatagtct tttagtttac ttttagtacg
     9781 aggcaatgag ccgcaggcat aactgaagtt aggcaaggcg agttgatgaa gtaacaaaag
     9841 aaaaactaaa tgacgataaa gttaaaaccg tcgatttatt tactagttaa gtatatcact
     9901 catatcgaaa tttagcaagt agtgtaaccg cccaataaca aggtatctat ccacccactc
     9961 cttcctccag tatactgtta taaaaaacaa actggaggat tttttatgtc acagcccatc
    10021 gtcccattga ctattcccaa atctcgccgc tttgaaaaga aaagcagaaa cgatattctg
    10081 atgaaaattc gtctcggaaa aacggaagtc acattcttcc aatctatcaa ccctaaaata
    10141 atggaaacaa tcttggataa ggtgctgcat tatgaccatc cgactcagtg atttaggtca
    10201 agtcttcttg gtctgcggga aaacggatat gcgtcagggg attgactctc tcgccta
//
LOCUS       DASFQD010000087        10118 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.088, whole genome shotgun sequence.
ACCESSION   DASFQD010000087 DASFQD010000000
VERSION     DASFQD010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 10118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10118
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.088"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(30..164)
                     /locus_tag="U1021_001636"
                     /pseudo
     CDS             complement(30..164)
                     /locus_tag="U1021_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774957.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            164..709
                     /locus_tag="U1021_001637"
                     /pseudo
     CDS             164..709
                     /locus_tag="U1021_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002288738.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
     gene            791..1327
                     /locus_tag="U1021_001638"
     CDS             791..1327
                     /locus_tag="U1021_001638"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712156.1"
                     /translation="MANYVYQQVICSKDFFETYFLDYYPIDEKRIDPPYISFNKLVCV
                     KNIGEYREQFGEYIYYGYGFTHKIRSDGLMVLKFATKRDVPIAAIRAAIQLDHSLEWY
                     AVEENCIYVSRFYWNHGVQEEIYLLDDDFGRWAEARYEFEEALADSDHIVWYYLLENK
                     INWIDRATLLDLPRYYEE"
     gene            1347..3050
                     /locus_tag="U1021_001639"
     CDS             1347..3050
                     /locus_tag="U1021_001639"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712157.1"
                     /translation="MWTKRIGYITEPRKLVDYFLSVGQFHDYLIGSFSYDSQSASLRL
                     TIEEDCLAESHSNEPALVWDLECQGVTNFRMQDMEGLSRWWIYEVLYDGTTCQFQLVN
                     GYFSFSAESFKLGIPHKPTTEGHPAITRLQYDYFLQEFEAGMNVDETAFRFETDNQDI
                     LRYIGYSGNEEPYWAGLSDLPDGGRFKTANELFEAKIYDGQSLKERWSEINIYSIHSL
                     PLDDWLSCVPHSVETHVYEPDDEYGLYINGVELDGFIDEDGKPCPSCGKAPCYLDDYD
                     EHFCPYCNSWMTEDLWDRDEVHYFEKRPLEPELLWKPNKMLRFCQVQFLHGEKFYSYY
                     CPDQTINKGDWVEVSVGKQAVKKDVQVVAIFTAPADRPPYPLDKIKTVLGKSREWSEM
                     IAEKLENLLTHGHICDLSEEKIPADSSIAYDLLKTPVGNFWLELDGQPIKMSVIAHYP
                     NLEDTYFVEGSYHLKPFEPDFTDFKRLSICTDIDFRTARLIDNLGGEHQYGNNWQVGD
                     YDIGIVAHPYSYDEEEVDENVLGIPYFREWIEDYQHLPCFSVAWKYYTSDKDLSIWFN
                     V"
     gene            complement(3174..5042)
                     /locus_tag="U1021_001640"
     CDS             complement(3174..5042)
                     /locus_tag="U1021_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011528775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEM4712158.1"
                     /translation="MTLVTNLKQHSHIITTALCLALILIGILLFQTEQGWAPILFISA
                     FVIGGYQSAKEGISELIFDKHLSVDLLMILAAIGSGLIGYWMEGALLIFIFSLSSTLE
                     ELAMEKSKNAIAALMNMTPPTARKIEENGDITVLDTAAIRIGDLLQVRKGDTVPLDAT
                     LISPQSIFDESMITGEPLPAEKMAGAAVIGGTINQGPTVTVQVTAEKGDALFDKIVQM
                     VENAQESKSKTATFIENMEDTYVKVVLVVVPLFILFAHFALGWDWLTAFYRGMILLTI
                     ASPCALVASSSPATLSAISRAARKGMIIKGGDIADNIANLEAIVFDKTGTLTIGKPEV
                     VGASYLGDEELIKQVVQAVEKQSSHPIAQALMTYTADSSAIALQSLEDVTGKGLVARY
                     EGDKWKIGKAGFVVDSLVSPLSADLLAQIDEAESTGKTLVYVSQNDVLVAIFMVEDSL
                     KPESKQLMAQLKEMGVTPILLTGDQEKTARYVASQVGIDRVIANCLPTDKAAVIQKLQ
                     TEFASVGMVGDGINDAPALAQANVSYAMGNGTDIAMESADIVLMEDLTRIPYSIRLSK
                     KMRDIIKQNIIFALSVIALLIISNLFQSINLPLGVVGHEGSTILVILNGLRLLYFK"
     gene            complement(5206..5661)
                     /locus_tag="U1021_001641"
     CDS             complement(5206..5661)
                     /locus_tag="U1021_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEM4712159.1"
                     /translation="MELHSHFNGENQTAFEHVIQHLKEKGVRITETRKAVVAYIIESD
                     DHPSAEMIYQDLLPNYPNMSLATVYNNLKVLLEEGFITELKRTNDTTTYYDFMGHEHL
                     NVICEVCGKITDFMDVEIPSLKKEAHTQTGYKITKEVLSIYGICPDCQG"
     gene            5828..6577
                     /gene="truA"
                     /locus_tag="U1021_001642"
     CDS             5828..6577
                     /gene="truA"
                     /locus_tag="U1021_001642"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011999919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEM4712160.1"
                     /translation="MTRYKAIISYDGHDFSGFQRQPHARTVQEEIEKTLVRLNSGQPV
                     TVHGAGRTDAGVHAYGQVIHFDLAGSRDTEKLRFALDTQTPEDIDVVSVEQVADDFHC
                     RYAKHSKTYEFLVDIGRPKNPMMRHYATFYPYDLDLSLIEEAIQDLVGTHDFTGFTAS
                     GTSVEDKVRTITAASMEYDQRREFLIFTFSGNGFLYKQVRNMVGTLLKIGNGRMPVGQ
                     IKRILAEKDRGLAGPTAAGNGLYLKEIIYED"
     gene            6567..7328
                     /locus_tag="U1021_001643"
     CDS             6567..7328
                     /locus_tag="U1021_001643"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004184219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEM4712161.1"
                     /translation="MKTKYILALSGNDIFSSGGLHADLTTYAVHKLHGFVAVTCLTAM
                     TEKGFEVIPTETVVFAQQLASLKDVPFSAIKIGLLPTVDIAEQALAFVKAHQEIPVVL
                     DPVLVCKETHDTEVSQLRDELLKFLPYVSIITPNLAEAQLLLQKDIETVEEMKQAAVA
                     LYDLGAKAVVIKGGNRLDGSEAIDVFYDGQEVVVLQSPLLSENNVGAGCTFASSIASQ
                     LLLGREPFEAVRLSKDFVHAAIEKSDDYGVIQYEK"
     gene            7318..7803
                     /locus_tag="U1021_001644"
     CDS             7318..7803
                     /locus_tag="U1021_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HEM4712162.1"
                     /translation="MRNKKTQELVLLAILTALSLVLAFVHVPTATGFVTLLDVGVYFT
                     AFYLGKKEGAIVGGLAGLLIDFLLGYPQWAFFSLLFHGAQGYFAGWTGKKRILGLVLA
                     TLSMVGGYYLASRIYFNDLKAIESVLSNALQNTVGLVVGYILAQSIERIGAVNHVIKG
                     N"
     gene            7784..8350
                     /locus_tag="U1021_001645"
     CDS             7784..8350
                     /locus_tag="U1021_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01440 family protein"
                     /protein_id="HEM4712163.1"
                     /translation="MSLKEIKDQTKQVVEEVLDLSNLQKGQIFILGLSSSEVIGGHIG
                     KNSSIEVGEVIVETVLDILTPKGIYLAVQGCEHLNRALVVERELAIQKDLEIVNVLPT
                     LHAGGSGQLAAFKYMKDPVEVEFITAQAGVDIGDTAIGMHIKHVQVPLRPSLREIGQA
                     HVTALASRPKLIGGARAAYQEDKIRKGS"
     gene            8350..8964
                     /locus_tag="U1021_001646"
     CDS             8350..8964
                     /locus_tag="U1021_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1349 domain-containing protein"
                     /protein_id="HEM4712164.1"
                     /translation="MKEFTVKDLVWTRPPRQFTISDEEITITTHPQTDLWQKTYYHFV
                     NDNAPVLQMETEEDYFSFTVRTDFAGSHTRFDQCGIVLYQDSENWLKCSIEYENEDFQ
                     HLGSVVTNHGFSDWATTEISSQIKSMWFRLSRRGADYCFENSEDGIHFKQMRVCHFHQ
                     GAGKIAFGLYACSPENSSFTARFTNMELSDCKWQAHDGQEPDEI"
     gene            9236..10000
                     /locus_tag="U1021_001647"
     CDS             9236..10000
                     /locus_tag="U1021_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712165.1"
                     /translation="MTKGYQQRFSLSILLWMRQDKARQEGMDYWSGGHAQIIAASPGL
                     LEYRQQHLSETEHSFWPKATGLETAVPEDRRIDGIAEVTYQKLLAPIGGRRQTALAFE
                     DEVNVFRRTLMHMGFPYSSRWYHTSTQAQTQLRDVLYFRRKDGVKSSSFKKFVQDGLA
                     SQLATVPGVTEVRSQVYLPWNKATWNTPNVAHDNPKEDHLHASIILGFADQVAREAFY
                     ANLAPQLNAEVVQYSSAVHAYHIEKTLPFVLDGKRM"
BASE COUNT         2795 a         2018 c         2440 g         2865 t
ORIGIN      
        1 ttttaaagac tgttttttcg atgtaactct cactctttca catattccaa aatatctcct
       61 ggctggcagt ctaggatgcg gcagatgctc atcagggtat taaaacgaat cccttttgcc
      121 ttgcctgtct tgagaatgga cagattggct tctgtaatac ctatatttgc gttatggtgg
      181 acctgaattt gccggccatc tctttgatca gccgaccttt gatcaggcca tccaagaatt
      241 tttacggaaa aaagcagagc tggcaaacta ttttgaagat aggacagaag acatctttga
      301 ctatattcca cctcaaaaga ccaaccaaat cttcaaaccg aagaagcttg ttcagaaaat
      361 ggtggatgag ttggaaaaag aaaatcctgg tatcttcgat gactcgtcca aaacctttat
      421 tgacctctat atgaagtcag ggctctatat cacagagttg gtcaaacgcc tctataatag
      481 ccaaggctta caagcagtct ttccagaaag gcatgatagg ctcaagcata tcttggaaga
      541 gcaagattac ggctttgcgc caacggctat tatccataag attgctttgg agttcatctt
      601 tggtacccta cctgacacca tcagtcggaa gaacttctta caagtggata ctgttcctta
      661 taccaaggac ggcaggatgc aggagttgat agataaatct tttgggtaaa ttgaaggaaa
      721 acttgtcatt tttgtcaagt ttttcagata aggtgctata ctaaaactag gaatgaaggg
      781 tggatatgtt atggcaaatt atgtttatca gcaggtcatt tgttccaaag atttttttga
      841 aacctacttt ttagattact acccgataga cgaaaaaagg attgatccac cgtatattag
      901 ttttaataaa cttgtctgtg tgaaaaatat tggtgaatat agggaacaat tcggtgaata
      961 catctattat ggttatggat tcacgcataa gatacggtca gatggcttga tggtcctaaa
     1021 gtttgcgaca aaacgtgatg ttcctatcgc tgcgattaga gcggctattc aactggacca
     1081 tagtctggag tggtatgcgg ttgaagaaaa ttgtatctat gtttctcgtt tttattggaa
     1141 tcatggtgtt caagaagaga tttatttact agatgatgac tttggaagat gggcagaggc
     1201 tagatatgag tttgaagaag cactggccga ctcagatcat attgtctggt attatctatt
     1261 ggagaataag ataaactgga tcgacagggc taccttgctg gacctaccga gatattatga
     1321 ggagtgattt gtgagaggag aatatcatgt ggacaaaaag aataggctac attaccgaac
     1381 ctaggaagtt ggttgattat ttcttatctg ttggacagtt tcatgattat ttgattggtt
     1441 ctttttccta tgatagtcag tcagctagtc tacgtttaac cattgaggag gattgtttag
     1501 cagaaagtca ttccaatgag ccagccttag tttgggattt ggaatgccag ggagtaacaa
     1561 attttagaat gcaagacatg gagggacttt cgaggtggtg gatttatgaa gttttatatg
     1621 atggaactac ttgtcaattt cagcttgtaa atggctattt ttccttctcg gcagaaagtt
     1681 ttaagttggg aattccccat aaaccgacta cagaagggca tccagccatt actcgtttgc
     1741 agtatgatta ttttctgcaa gaatttgagg cggggatgaa tgttgatgag actgcttttc
     1801 gttttgagac agataatcag gatattcttc gatatattgg atattcagga aatgaagaac
     1861 cctactgggc aggtttgtca gatctaccag atggtggaag atttaagaca gctaacgagc
     1921 tttttgaggc aaaaatttat gatggtcaat ctctcaagga aagatggagt gagatcaaca
     1981 tttatagtat tcattctttg cctttggatg actggttgag ttgtgtacca cattctgttg
     2041 aaacgcatgt gtatgaacca gatgatgagt atggtctcta tatcaatggt gttgaattag
     2101 atggttttat tgatgaggat gggaagcctt gtccatcttg tggtaaagcc ccatgttatt
     2161 tagatgatta tgacgaacat ttttgtcctt attgcaatag ctggatgaca gaggacttgt
     2221 gggataggga tgaggtgcac tactttgaaa aacgtcctct tgagccagaa cttttatgga
     2281 aaccgaataa aatgctacga ttttgccagg tacaattttt gcatggtgaa aagttttatt
     2341 cctattattg tcctgaccaa accataaata agggagattg ggtggaagtt tcagttggca
     2401 agcaagctgt aaaaaaagat gttcaagtag tggctatctt taccgctcca gcagaccgtc
     2461 ctccctatcc tttggataaa ataaaaaccg tactaggaaa atcaagagag tggtcggaaa
     2521 tgattgcgga aaaactggag aatttactaa ctcatggcca tatctgtgat ctatcggaag
     2581 aaaaaatccc agccgattct tccatagctt acgacctctt gaaaactcca gtcggcaatt
     2641 tctggttgga attagatggt cagcccataa aaatgtcagt tatagcccat tatccaaatc
     2701 ttgaggatac gtactttgtg gaaggaagtt atcatctgaa accttttgag ccggatttta
     2761 ctgattttaa gagattatcg atttgtacag atattgactt tagaactgcc agactgattg
     2821 ataacttagg cggtgaacat caatacggga ataattggca agttggtgat tatgatattg
     2881 gaattgtcgc gcacccatac tcatacgatg aagaagaagt agatgaaaat gttttaggaa
     2941 ttccctattt tcgtgaatgg atagaagact atcagcatct accttgcttt tcggttgctt
     3001 ggaaatacta tacttccgat aaggatttat ccatctggtt caatgtctaa ctgaatggag
     3061 taccctctgc atgagctagg cttaggttgt aaatctctct tcatttcaat aataaaagta
     3121 ttttccatat caataaagaa accgccaagt tgttagtagc tggcggcttt ctgctattta
     3181 aaatacaaga gtctcagtcc gttgagaatg accaaaatcg ttgatccttc gtgcccgacc
     3241 acgccgagcg gcaggttgat agactggaag aggttggaga tgataagaag ggcaatgaca
     3301 gatagagcaa agatgatgtt ctgcttgatg atgtcccgca ttttcttaga gagacggatg
     3361 gagtaaggaa tccgggtcag gtcttccatg agcacgatgt cagccgactc catagcgatg
     3421 tccgtaccgt ttcccatagc atagctgaca ttggcttggg caagggcagg agcatcgttg
     3481 ataccgtctc ccaccatgcc gacagacgca aactcggttt gcagtttttg gataacagca
     3541 gccttatccg tcggcagaca gttggcaatc acacggtcaa taccgacctg actcgccacg
     3601 taacgagccg tcttttcttg gtcacccgtc aagagaattg gcgtcactcc catttctttc
     3661 aactgggcca ttagctgctt gctctcaggt ttcaaactat cttccaccat gaagatcgcc
     3721 accagcacat cattttgact aacatagacc agggttttcc cagtgctttc cgcctcatcg
     3781 atctgtgcca gcaagtcagc agaaagcgga ctcaccaggc tgtccaccac aaatcccgcc
     3841 ttaccgattt tccacttgtc gccctcatat ctcgccacca agccttttcc ggtcacgtct
     3901 tctaggcttt ggagggcaat agcagagctg tcagccgtat aggtcatcag agcctgagcg
     3961 atcggatggc ttgattgttt ttcaactgcc tgaacaacct gcttgataag ctcctcatcg
     4021 ccaagatagc ttgcccctac aacctcaggt ttaccaatgg ttagggtacc cgtcttgtca
     4081 aagacgatgg cctctagatt ggcgatattg tccgcaatgt caccgccctt gataatcatg
     4141 cccttgcgtg ccgcacggct gatggcagaa agtgttgcgg gtgaagaaga agctacgagg
     4201 gcacaaggag aagcgatagt caagagaatc atgccacggt agaaggcagt taaccagtcc
     4261 cagcccagag caaaatgagc aaagagaatg aagagtggta ccaccaccaa aacaaccttg
     4321 acataggtat cttccatatt ttcaatgaaa gtcgctgttt ttgatttgga ttcttgggcg
     4381 ttttcaacca tttggacgat tttatcgaat agggcatcgc ctttctcagc cgtaacttgt
     4441 acagtcacag ttggtccttg gttaatggtt ccgccgataa cagcagcgcc agccattttc
     4501 tccgcaggga gcggctcgcc tgtaatcatg gattcgtcaa agatggattg gggactgatg
     4561 agggtagcat ccagtgggac cgtgtcaccc ttccgaactt gcaagaggtc gccaatgcgg
     4621 atggctgcgg tgtctaagac agtaatgtca ccattttcct cgattttgcg agccgttgga
     4681 ggcgtcatat tcatcagagc tgcaatagca ttcttgcttt tttccatggc taattcttcc
     4741 agagtagaag aaagggagaa gatgaagatg agtagagccc cttccatcca gtagccaatt
     4801 agaccagagc cgatagcagc taaaatcatg agcaggtcaa cggacaggtg cttgtcgaaa
     4861 atcagctcag aaatgccttc cttggctgac tggtagcccc cgatgacaaa ggctgaaatg
     4921 aagaggatag gagcccatcc ctgttcagtc tgaaacagaa ggatacctat tagaatgagc
     4981 gccaagcaga gagcggttgt gatgatgtgg ctgtgttgtt tgaggttggt tacgagtgtc
     5041 atagtttgct cttccttatt tagaattatt atcatttaac caagttaatt ataacagttc
     5101 taaatagaaa gtcaagttat ttataataat tctaaataag aaagttcaga caattcaaag
     5161 gaaaataaaa aaaaagcgac agaaagccgc tttgatattc atcttttagc cctgacaatc
     5221 aggacaaatg ccgtagatgg atagtacctc ttttgtaatt ttgtaaccag tttgggtatg
     5281 agcttccttc ttcaagctcg ggatttctac atccatgaaa tcagtgattt ttccacagac
     5341 ttcacaaata acattgagat gttcgtggcc catgaaatca taataggttg tcgtgtcatt
     5401 ggtacgcttg agttcagtga taaatccttc ttccaagaga actttgaggt tgttgtaaac
     5461 agtcgccaga ctcatgttgg ggtagttagg tagtagatct tgataaatca tttcagcact
     5521 agggtggtca tcgctttcga taatgtaggc aacgactgct tttctagttt cggtaatgcg
     5581 tacacccttt tcttttagat gttggatgac gtgttcaaaa gcagtttggt tttctccatt
     5641 gaagtgagaa tggagttcca tagtttcctc ctttcgttat tattttataa aaattctaag
     5701 atacaatatt cagtttcatt atagtgtatt tgggaggttg tgtcaatttt gagacaggaa
     5761 atctgtcata ggacagtttg gtgtctcatg acttgtttac atacttttcc tgtgctacaa
     5821 tcaaaacatg acaagatata aggcaattat ttcctatgac ggacatgatt tttctggttt
     5881 tcagcgccag ccccatgccc gtacagttca ggaagaaatc gaaaaaacgt tagtaagatt
     5941 gaacagtggc cagccagtaa ccgttcatgg agcaggtcgg acggacgcag gagtgcacgc
     6001 ttatggtcag gtgatccact ttgacttggc tggcagtcga gacactgaga agctccgctt
     6061 tgcccttgat actcaaaccc ctgaagatat tgatgtggtc agtgtggagc aggtggcgga
     6121 tgattttcat tgccgctatg ccaagcacag caagacctac gagtttctgg tggatattgg
     6181 gcgacccaag aatcccatga tgcgacacta tgcaaccttt tatccctatg atttggactt
     6241 gagcttgata gaagaagcca ttcaggactt ggtggggacc catgacttca caggctttac
     6301 agcttcgggg acctcggtcg aggacaaggt gcggaccatt acggcggcaa gcatggaata
     6361 tgaccagcgg cgggagttct tgattttcac cttttcagga aacggttttt tgtacaagca
     6421 ggtgcgcaat atggttggca ccttactgaa aattggcaat ggtcgcatgc ctgttgggca
     6481 gattaaaagg attttagcag aaaaggatcg tggtttggcg ggaccgactg cggcgggtaa
     6541 tggcctctat ctaaaggaga ttatttatga agactaagta tattttggcg ctttcgggca
     6601 acgatatttt cagcagtggc ggtctccatg cggatctgac gacctacgct gtccacaagc
     6661 tgcatgggtt tgtggcggtg acctgcttga cagctatgac ggaaaaaggt tttgaggtca
     6721 ttccgacgga gactgtggta tttgcccagc aactggctag tttgaaggat gtgccctttt
     6781 ctgcgattaa gatcggcttg cttcccacag tggacatagc agagcaggct ttggcgtttg
     6841 tcaaggctca ccaggagatt cctgtggtct tggatccggt cttggtctgc aaggaaacgc
     6901 acgataccga ggtcagccag ttgcgagatg aactcttgaa attccttcct tatgtcagca
     6961 ttatcacacc aaatctggca gaagctcagc tattgctcca aaaggatatc gaaacggtgg
     7021 aagagatgaa gcaggcggca gtggccttgt atgacttggg agccaaggcg gtggtcatca
     7081 agggaggtaa tcgtctggat ggctcagagg cgatcgatgt tttctacgac ggtcaggaag
     7141 tggtggtgct ccagtcgcct ctgctgtcag aaaacaatgt gggggcaggc tgtacctttg
     7201 cgtccagcat tgccagtcag cttttgctgg gaagagaacc tttcgaggca gtcagactgt
     7261 ccaaggactt cgtccatgcg gcgattgaaa aatcagatga ttatggggtg attcaatatg
     7321 agaaataaga aaacacagga attagtatta ttagctatct taacagcctt gagcttggta
     7381 ttagcctttg ttcatgtgcc aactgcaact ggttttgtca cgctcttgga tgttggggta
     7441 tattttacag ccttttactt gggcaagaaa gagggagcca ttgtcggcgg tttggcaggg
     7501 ctgttgatcg atttcttgtt gggctatccc cagtgggctt tctttagttt gctcttccac
     7561 ggtgctcaag gttattttgc gggttggaca ggcaagaaac ggattctcgg tttagtcttg
     7621 gcgacactct ctatggttgg tggctactac ctggcatctc ggatttattt taatgacctc
     7681 aaagccattg aaagtgttct aagcaatgcc ttgcaaaaca cagttggttt ggtagttggt
     7741 tacatcttgg ctcagtcaat agaaagaatt ggtgcagtaa atcatgtcat taaaggaaat
     7801 taaagaccaa actaagcagg ttgtcgagga agttttagac ctcagcaatc ttcaaaaggg
     7861 gcagatattt atcctaggtt tgtcttctag tgaggtgatt ggtgggcata tcggaaaaaa
     7921 ttccagtata gaagtcggtg aagtgattgt tgaaaccgtt ttggatattt tgactcccaa
     7981 ggggatttat ttagctgtcc aaggctgcga acacctcaat cgtgccttgg tggtggagcg
     8041 ggaattggca atccagaagg acttggaaat agtcaatgtc ttacccaccc ttcatgcagg
     8101 tggctccggt cagctggcgg ccttcaagta tatgaaggac ccggtggaag tcgagtttat
     8161 caccgcacag gctggtgtag acatcggcga cacagctatt ggcatgcaca tcaagcacgt
     8221 ccaagtgccg ctcagaccaa gtttgcgtga gattggacag gcccatgtca cagctctcgc
     8281 cagccgacca aaactaatcg gcggagcccg tgcagcctat caggaagata agatacggaa
     8341 aggttcataa tgaaagaatt tacagtcaag gatttagtgt ggacccgtcc accgagacaa
     8401 ttcactattt cagatgaaga aattaccatt accacccacc cccagacgga tttgtggcag
     8461 aagacctatt accattttgt gaatgacaat gctcctgtct tgcaaatgga aacggaggag
     8521 gactattttt cctttactgt gaggacggat tttgcgggta gtcatactcg atttgaccag
     8581 tgtggaattg tcctttatca agattcggag aattggctaa agtgttcgat agagtatgaa
     8641 aatgaggatt tccaacactt gggaagtgtg gtgactaatc acggcttttc tgactgggca
     8701 actactgaaa tcagttcaca aatcaaatcc atgtggttta ggctcagtcg caggggagca
     8761 gattactgtt ttgaaaattc cgaagacggt atccatttca aacaaatgcg ggtttgccat
     8821 tttcatcaag gggcggggaa aatagctttt gggctgtatg cctgttcacc agaaaactcc
     8881 agttttacag ctcgctttac caatatggaa ttgagcgact gcaaatggca ggcccatgat
     8941 ggccaagagc cagatgaaat atagtgagag tcttaggtaa gtagtaacag aaaaatagtt
     9001 gaaacttata ctcttcgaaa atcaaaaagc tccgttgtca acttgccttg aagaactcct
     9061 gttcaatctt cgccgtcgtt tccaaggcga cttttgattt ccattgagtg tcaggaagta
     9121 actttcgact agtaagagag ttactttttt tatcttttga gccaaatcct tgccaagaag
     9181 tctggcttgt gataaacttg ttcctgtaaa tgatacaaga acagaaggag aagacatgac
     9241 aaaaggatac caacaacgat tttcactgtc cattttatta tggatgcgtc aggataaagc
     9301 acgccaagag ggaatggact actggagtgg cgggcatgca cagattattg cagcttcacc
     9361 gggtctatta gaataccgcc agcaacattt gagtgagaca gaacatagtt tttggccgaa
     9421 agcgacaggc ttggaaacgg ctgttccaga agatcgtcgg attgatggca ttgcggaagt
     9481 gacctatcaa aagttattgg caccaatagg cggtcgccgt cagacggccc tggcctttga
     9541 agatgaggtc aatgttttcc gtcggacttt gatgcacatg ggcttccctt attcatcacg
     9601 ttggtaccat actagcactc aggcccaaac ccaactgcgt gatgtcctat acttccgtcg
     9661 caaagatggg gtgaagagca gtagtttcaa aaaatttgtt caagatggac tcgccagtca
     9721 actggcgaca gtccctggag taacagaagt acggtcgcag gtctatcttc cttggaataa
     9781 agcgacttgg aataccccaa atgttgccca tgacaatcct aaagaagacc accttcatgc
     9841 ctccatcatc ctaggttttg cggatcaggt ggcaagagag gccttctatg ccaacctagc
     9901 tccgcagttg aatgcagaag tggtgcaata ctcctcagca gtccacgcct atcatataga
     9961 aaaaaccttg ccatttgtcc tagacggcaa acgcatgtaa gacaagcgac ttcttggtcg
    10021 aatgctttat taaaaaaata tagtcgaatg aatgagcttt tagacaagga actgaggtgt
    10081 aggttggaga tataacttgc aaagcaagtc acttccgc
//
LOCUS       DASFQD010000088        10074 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.089, whole genome shotgun sequence.
ACCESSION   DASFQD010000088 DASFQD010000000
VERSION     DASFQD010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 10074)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10074)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10074
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.089"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(226..645)
                     /locus_tag="U1021_001648"
                     /pseudo
     CDS             complement(226..645)
                     /locus_tag="U1021_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013642872.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
     gene            complement(657..1391)
                     /gene="argB"
                     /locus_tag="U1021_001649"
     CDS             complement(657..1391)
                     /gene="argB"
                     /locus_tag="U1021_001649"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEM4712166.1"
                     /translation="MENFIVIKIGGVASKQLSQGFMKQIKNWKQAGKQVIIVHGGGFA
                     INKLMEERQLAVEKVDGLRVTSHEVMKLVAFGLLEQVGKDIVASLNAAGCDCLQLRAN
                     LGKVIQAGFLDKKKYGYVGNVTGIHTAYLEELLQEGLTPVLASMGGKDDELLNINADY
                     VATALAIALKAERLILMTDVPGVKEDGQVISQLSTKQAQEKIRSGVITGGMVPKIKGA
                     SETVEAGVQTVLISDNLVKGTLIHLT"
     gene            complement(1401..2594)
                     /gene="argJ"
                     /locus_tag="U1021_001650"
     CDS             complement(1401..2594)
                     /gene="argJ"
                     /locus_tag="U1021_001650"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011225582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEM4712167.1"
                     /translation="MKIISGNIASPLGFSADGLFAGFKKKKMDFGWIVSEVPASVAGV
                     YTTNKVVAAPLLVTKEVITQNGKMQAMVVNSGVANSCTGQRGMDDARTMQELTAKKLG
                     IDKNLVGIASTGVIGEFLPLDKLENGLSRIVVNGNADDFAKAILTTDTITKSITVQET
                     FGKDLVTMSGVAKGSGMIHPNMATMLAFITCDAVISSQTLQKALSTLVETSFNQITVD
                     GDTSTNDMVVVLANGCSLNKEIVEGTKEYDRFLAMLDLVMTELAKKIARDGEGASKLI
                     QVDVSGASDGLAARMVAKSIVGSSLVKTAIFGEDANWGRIIAAIGYAGVDIDVDHIDI
                     ALEGIPVMTQSSPVEFDQEEMAEIMQKDTITINVNLHMGPASGRAWGCDLSYDYVKIN
                     ALYRT"
     gene            complement(2607..3629)
                     /locus_tag="U1021_001651"
     CDS             complement(2607..3629)
                     /locus_tag="U1021_001651"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014834898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEM4712168.1"
                     /translation="MKVSIVGVTGYSGLELVRILKSHPHVNVVSIYATKEVGQDISNI
                     FPHLENVSDLQVTAFDAEKIMEESELVFFATPSGIAKDYAEDFIQAGFPLIDLSGDHR
                     LPSSDYQKWYQRTPAKDEVIESFAYGLSEFADVKGKKFIANPGCYATATELALIPLLA
                     AKIVDVNSIIIDAKSGLSGAGKNPNASSHFVHVNANYVTYKLNQHQHIPEIVQTLQGF
                     DASLNYIQFSTSLLPVNRGIVATCYLKLTKELTNQDIESIYQGAYAHKPFVRVKAQIP
                     SLSQVIGSNYTDIGFDYNPVTKVLTVVAVLDNLVKGAAGQAVQNMNLMFGFEETTGLL
                     AAPAFI"
     gene            4501..5616
                     /locus_tag="U1021_001652"
     CDS             4501..5616
                     /locus_tag="U1021_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HEM4712169.1"
                     /translation="MSEIIAKRVSNYELFYDLVFVLATSSLTGLLHGDHIGLREILTF
                     ITANLIIMTLWINETIYLNKYGERDLLDIFTIIASMFVVGQLSLNFSHDFKATALPFT
                     IFLTLSYLLLCLQYYLRGRKIGFTADIKNSLYMFGIYLLVFFLALVAIYFNFWTYDEK
                     SLLLFYLPFFISYFFKDKLSHDVMNFPHIVERCQLITIITFGETVIAILKNYPILELP
                     LEGILLFFAMATLFIFYISQTYLTIDHHRKADATVLLYAHLVIVLGLNFFTVAMELFP
                     SHHNDLALPMLIVGNLLFYSGILSTSFYNQQVHQVGRRGLFIYALILLIGNVALLLDG
                     HSNILLFVILNLLSHAMVAYHVIRFRKANHSLLGEDI"
     gene            complement(5706..6971)
                     /gene="dltD"
                     /locus_tag="U1021_001653"
     CDS             complement(5706..6971)
                     /gene="dltD"
                     /locus_tag="U1021_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-lipoteichoic acid biosynthesis protein
                     DltD"
                     /protein_id="HEM4712170.1"
                     /translation="MRKQLWQIFGPVICATFLVILTLLFFPSSSRSNFKEEKQDAVAL
                     SYISFKSKYKKNRALGDKNHRFVPFFGSSEWSRFDSMHPSVLADAYQREYTPYLLGQR
                     GAASLTQYFGMQQIGAHLKNSQAIYVVSPQWFSPKGASSKAFEQYFSSDQATHFLQTS
                     AEDDYDRYAAKRFLELKSDCSLTGMFQKVASGKELSKWDREQLTWQAYLLEKQDALFS
                     RFADSGSNLGLVETEAMKLPEPFSYDRLSKVANEDGSRSTQSNDFQIDDRFYRNRLQS
                     KIKKLKQSQTKISYLQSPEYNDFQLVLNEFAKHQTDVLFVIPPVNERWMNYTGLNKDM
                     YRATVAKIKYQLTSQGFNHIADLSEQGGIDYFMQDTIHIGWQGWLELDKYIHPFLTEQ
                     QAPVHYQLKKEFLTSEWAAYKGDLNLFLK"
     gene            complement(6964..7203)
                     /gene="dltC"
                     /locus_tag="U1021_001654"
     CDS             complement(6964..7203)
                     /gene="dltC"
                     /locus_tag="U1021_001654"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005591431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     DltC"
                     /protein_id="HEM4712171.1"
                     /translation="MDVKETILNIIEELFMEDVSEMMDEDLFDAGVLDSMGTVELIVE
                     LESRFNITVPVSEFGREDWNTANKIISGVVELMHA"
     gene            complement(7246..8487)
                     /gene="dltB"
                     /locus_tag="U1021_001655"
     CDS             complement(7246..8487)
                     /gene="dltB"
                     /locus_tag="U1021_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-lipoteichoic acid biosynthesis protein
                     DltB"
                     /protein_id="HEM4712172.1"
                     /translation="MMEFFKQLPQLEPYGNPLYFFYLVLALVPIFIGLFFKKRFPLYE
                     TGVSLAFIVLMFTGTKTIQLLSLLAYIIWQTMLIFFYKHYRQRANQSWVFYLIVCLAV
                     FPLTWVKLAPTFSQHGAIFGFLGISYLTFRSVGMMIEMRDGLLTEFSLGSFLRFLLFM
                     PTISSGPIDRYRRFTEDYKQIPERTELLNMLDQTVHYIMMGFLYKFILAYFIGHTLLE
                     PLKAVALDQGGWFNLPTIGVMYLYGFELFFDFAGYSMFAIGISNLMGIRCPINFDQPF
                     KSRDLKEFWNRWHISLSFWFRDFVFMRLVKTLLKHKVFKNRNTVSNVAYLLNMLLMGL
                     WHGVTWYYIAYGLFHALGLIINDAWIRKRKSINLARKKAGQEPLLDNRWTSFAGMFVT
                     FHTVMFSFLIFSGFLDKLWFK"
     gene            complement(8484..10046)
                     /gene="dltA"
                     /locus_tag="U1021_001656"
     CDS             complement(8484..10046)
                     /gene="dltA"
                     /locus_tag="U1021_001656"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     DltA"
                     /protein_id="HEM4712173.1"
                     /translation="MSFKEESIKKISSMLERVEHFATENPDYPVYHYLGQLYSYGDLK
                     ADSDSLAAHIDSLDLPANSPVLVFGGQEYQMLAIFVALTKAGHPYIPVDSHSALDRIE
                     AILEIAEPSLVFAVADFPLETSLPVLGLSEVEAIFEKKSTYQLMHPVSGDDTYYIIFT
                     SGTTGKPKGVQISHDNLLSFTNWMIRDKEFALPERPQMLAQPSYSFDLSVMYWAPTLA
                     LGGTLFALPKELTLDFKTLFAAIQTLPFKIWTSTPSFVDMALLSREFDGKHLPNLTHF
                     YFDGEELTVKTVQKLRERFPKAVIVNAYGPTEATVALSAVAITNEMLVNYKRLPIGYT
                     KPDSPTFILDEDGQVVPNGQQGEIVVSGPAVSKGYLNNPERTEAAFFQFDGLQAYHTG
                     DLGVMTDEGLLLYGGRMDFQIKYNGYRIELEEVAQHLNKSTYIEAAVAVPRYNADHKV
                     QNLLAYVVPKAGIMEQFDRELELTKVIKQELKERMMDYMMPSKFIYRDSLPLTANGKI
                     DIKGLIAEVNAQ"
BASE COUNT         3070 a         2299 c         1687 g         3018 t
ORIGIN      
        1 aggcacctat ctattattcg acccaatcga accttccaaa gaaaaatacg aagccagcta
       61 cctgtaagct tcacttatag agtaacataa tagttgaaaa atagggcaaa aaatccttcc
      121 ttttgtgccc cctaaataca aaaactattc ccgttttgcc atcaattact cggacgggaa
      181 tagtttcttt agctgcttaa atgcttaact taatgacatt ggggcaaagc caagctgaat
      241 tttttcttga cctgtcgctg acatggcccc ataggtacga ccatggaagg actgtttgaa
      301 gcagataata tcagatttcc cacttgcttt tcttgctaat tttatagccg cttcattgct
      361 ctcagcaccc gaattacaga aaaaggcaag gtaatctttt tctccaatta agagctcggc
      421 gacttcttcc tgcaggctat tttgatagag attgggacta tgccaaatct cttctaattg
      481 tttttccacc gcttgcttga ctagaggatg aaagccaaga ttggtcacac cgattccaga
      541 tgaaaagtcc agatagacat tgccatcttg atcgaccaac gtattgccta ccgccctgac
      601 aaattcaatg gcatctcgct tgtaattttg aaataactta ctcatgtagc aacctcctag
      661 gttaaatgaa tcaaggttcc cttgacaaga ttgtcactga taaggaccgt ttgtacacct
      721 gcttccacag tctcgctagc tcccttgatt tttggtacca tacctcctgt gataacccct
      781 gaacgaatct tttcttgtgc ttgtttggta ctaagctgag agataacttg cccatcttcc
      841 ttcacacctg ggacgtccgt catcaaaatc aaacgttcag ctttcagagc aattgccaaa
      901 gctgttgcga catagtcagc gttgatatta agtaactcat catcttttcc acccatggaa
      961 gcaagaactg gagtcaatcc ttcctgtaaa agttcttcta aataggcagt atgaataccc
     1021 gtgacatttc ccacatagcc atatttcttc ttgtctaaaa aaccagcctg aataaccttt
     1081 cccagatttg cacgaagctg caaacaatca cagccagctg cgttcaagct tgccactata
     1141 tccttcccta cctgctcaag cagaccaaag gcaaccagtt tcatcacttc atgactagtc
     1201 acgcgcaacc catccacttt ctcgacagct agctgtcgct cttccattaa cttattgatt
     1261 gcaaaaccgc ctccatggac aatgatgacc tgttttcccg cctgtttcca atttttgatt
     1321 tgtttcataa agccttgtga caactgttta ctggccactc cacctatttt tatgacaatg
     1381 aaattttcca taccgaactc ctatgttcta tacaaagcgt taattttcac ataatcatat
     1441 gatagatcac acccccatgc ccgaccactt gctggtccca tatggagatt gacattgatt
     1501 gtaatggtat ccttttgcat aatttcagcc atttcttcct ggtcaaattc gaccggactg
     1561 gactgagtca taactggaat cccctccagg gcaatatcaa tgtggtccac atcaatgtcc
     1621 acacccgcat agccgatagc tgcaataatc cttccccagt tggcatcttc accaaagata
     1681 gccgttttga ccaaactgga tccaacaata ctttttgcta ccattcttgc cgccagacca
     1741 tcagaggcgc cagacacatc cacctggatt aatttggacg ccccctctcc atccctggca
     1801 atttttttag caagttctgt catgacaagg tccaacatgg caaggaaacg gtcatactct
     1861 ttagtcccct caacaatttc tttattgaga ctacaaccgt tggctaggac cacaaccata
     1921 tcatttgtag aagtatcccc atccactgta atctgattga aactagtctc aaccagtgta
     1981 ctgagtgcct tttgcagggt ttgactagaa atgaccgcat cacaggtgat aaaagccaac
     2041 atagtcgcca tattggggtg aatcattcct gaacccttag caacaccaga catggtaaca
     2101 agatcctttc cgaaagtctc ttgaacggta atggatttgg tgatcgtatc ggtcgtcaaa
     2161 atagccttgg caaaatcatc tgcatttcca tttaccacga tcctagacaa gccattctcc
     2221 aacttatcaa gtggtaaaaa ttcaccgatt acccctgttg aagcaatacc taccagattc
     2281 ttatcaatac ccaatttttt agccgttagt tcctgcatgg ttctggcatc atccattccc
     2341 ctttgacctg tacaagagtt ggccactcct gaattaacga ccatagcctg catctttcca
     2401 ttttgcgtaa ttacctcttt ggtcactaaa agtggagctg caacgacctt attggtagta
     2461 tagacacccg ccacactggc tggaacctct gatacaatcc aaccaaaatc catcttcttc
     2521 tttttgaatc ctgcaaacaa gccatcagct gaaaagccaa gtggactagc aatatttcct
     2581 gatattatct tcatcttatt ctccttttaa ataaatgctg gtgctgccaa gagcccagta
     2641 gtctcttcaa acccaaacat caggttcata ttttgaactg cctggcccgc agctcccttg
     2701 actaaattgt ccaaaacagc tacaactgtc agtaccttcg taactggatt gtaatcaaaa
     2761 ccgatatccg tataatttga accaatcact tgacttaggc tgggaatttg tgccttgaca
     2821 cgaacaaatg gtttatgtgc ataggcacct tgatagatag actcaatatc ttgattggtc
     2881 aactcctttg tcagtttgag ataacaagtg gcaacgatgc cacgattgac gggtagcaag
     2941 gaagttgaaa actggatata gttaagactg gcatcaaatc cctgtaaggt ttgaacaatt
     3001 tcaggaatat gctggtgctg attgagcttg taggtcacat aattggcatt gacatgtaca
     3061 aagtgactgc tcgcatttgg attttttcca gctccgctca gaccactctt cgcatcaatg
     3121 atgatggaat ttacatcaac tattttagct gccaagagag gaatgagcgc caattcagtt
     3181 gccgttgcat aacaacctgg atttgcaata aattttttcc ccttcacatc tgcaaattct
     3241 gataaaccat atgcaaagga ttcaatcacc tcatcttttg ccggtgttct ctgataccat
     3301 ttttgataat ctgagctggg tagacgatgg tccccagata aatcaatgag cggaaagccc
     3361 gcctgaataa agtcttcagc gtaatcctta gctataccac tcggtgttgc aaagaagact
     3421 aactcggact cctccatgat tttctctgca tcaaatgcag tcacctgcaa atcacttaca
     3481 ttctctaaat gtggaaaaat attcgaaata tcctgcccaa cttctttagt cgcataaata
     3541 gacactacat ttacatgagg atgacttttc aatatcctaa ccagctctaa tccactataa
     3601 ccagtaactc ctacaataga tactttcatt tttattcacc tttttagtat ttttattcaa
     3661 catagtttac tctactatgg ataaaatgtc aagtcatttc tgcatattat ttcaaaaaca
     3721 atgtaatatt attcaatttc ggaacatttg attgaaaaat atagaaaatt catgcagtct
     3781 ccctatcaat ctaaaacaag ctccatgtgt tttgatacat ttacagtatc ctagccccat
     3841 tgaaaataaa atcaagatta ccctagaacg acccaatgaa agagttaaaa aggctgtaat
     3901 aactattttg ctttcaagtg ataacttcga tagaatgtgt tataccaaag ttgattacaa
     3961 gttcaggaaa tacaagcata gagaaaacac ccacggctgc cgacgagggt gttttttgtg
     4021 cttgctcaag gcaactcagg ctattgtatg tatagtgact tgaattagga aagggataat
     4081 tttaagttat agtgttaata acccactcct aaaataactt tagagttctc aaattgacaa
     4141 acttagatat gtcctgtttc tatttcactc gactatattt gtcgcattta tccgctaatc
     4201 ggattggcca ttccgaaatc acgattgcta atatagatac taacaaggta gcaggataag
     4261 ttcaaagtgt atacgcataa agtctcacct cccaacctgc actgtttaat gattgtgact
     4321 tagataatct gtcataaaac gcacaaacca tacaattata aaaaatttat tcccgccaaa
     4381 gaatcaagaa ttgaaagact cacacaaacg tttccacgat tattatccca aaatgactag
     4441 tttgctctct cgccttttcg tatggtataa taggtcagat tttttgaaaa ggagattgac
     4501 atgtctgaaa ttatcgcaaa acgcgtatca aactatgaat tgttttatga cttggtcttt
     4561 gtattagcta cttcttcact gactggcctc ttacacgggg accatatcgg actcagggaa
     4621 attctaactt ttatcactgc aaacttgatt atcatgacct tgtggattaa tgagacgatt
     4681 tacctcaaca aatatggtga gcgagatttg ctggatattt tcactatcat cgcttctatg
     4741 tttgtggtgg ggcaattatc cctaaacttt agtcatgatt ttaaagcgac agccctaccc
     4801 tttactatct ttttgaccct gtcttatttg ctactttgct tgcagtacta ccttcggggg
     4861 cgaaaaatcg gttttacggc agatataaaa aatagtctct atatgtttgg gatttatttg
     4921 ctggtatttt tcttggcttt ggtagctatt tacttcaatt tctggaccta tgatgaaaag
     4981 agcctcttgc ttttttatct tccatttttc atttcctatt tcttcaagga taagctcagt
     5041 cacgatgtca tgaactttcc tcacattgtt gaacggtgtc agttgattac tattattact
     5101 tttggtgaaa cggtcattgc gattttgaaa aattatccga ttctagaact tcctttggaa
     5161 ggaatcctcc tcttcttcgc aatggcgact ctgttcatct tctatatttc tcagacctat
     5221 ctcactatcg accatcaccg caaggcagat gcgactgttc tgctatacgc tcatttggtg
     5281 attgttcttg gcttgaattt cttcacagtg gcaatggaac ttttccctag tcatcataat
     5341 gatttggcct tgcccatgct gattgtagga aaccttctct tctatagtgg tatcctttcg
     5401 acctccttct ataatcaaca agtccatcaa gttggcagga gagggctgtt catctatgct
     5461 ctcattttac taattggaaa tgttgcctta ttgctggatg ggcattcaaa tatcctacta
     5521 tttgttatct taaacctgct ctcacacgct atggttgcct atcatgttat tcgcttccgc
     5581 aaagccaacc acagtttgtt gggagaagat atataatcat tcagtttatt acagtaaaag
     5641 aacaaaaaaa gcaaggagac ttcctaattc aaagccttct tgctttttat tataactgta
     5701 tctaactatt ttaaaaataa gtttaaatct cccttatatg cagcccattc agaagttaaa
     5761 aattcttttt ttaactgata atgaacaggt gcttgttgtt ctgtcaagaa tgggtggata
     5821 tacttatcaa gctccagcca gccttgccaa ccgatgtgga ttgtatcttg cataaaataa
     5881 tctatccccc cctgctccga caaatcagca atatgattga aaccttgact ggtcaactgg
     5941 tacttaatct ttgctactgt tgcccgatac atatctttat tgagaccagt gtagttcatc
     6001 caacgttcat taactggggg aattacaaat agcacatcag tctgatgttt agcaaattca
     6061 ttcaaaacca gctgaaaatc attgtactcc ggtgattgca gataagatat ttttgtctgg
     6121 gattgtttga gttttttgat ttttgactga agacgatttc tataaaacct atcatcaatt
     6181 tggaaatcat ttgattgagt agaacgactc ccgtcctcat tagccacttt actcaagcgg
     6241 tcataggaaa aaggctctgg aagtttcatc gcttccgttt ctaccaatcc taaattacta
     6301 ccagaatcag caaagcgact aaataaggca tcttgctttt ctaataaata ggcttgccag
     6361 gtcaactgct ctctatccca tttcgacaat tccttaccac tagctacttt ttgaaacatt
     6421 cctgtcaaac tacagtctga tttaagctct aagaaacgct ttgctgcata tctatcatag
     6481 tcatcctcag cacttgtttg cagaaaatga gtggcttgat cactactaaa atattgttca
     6541 aatgccttag atgatgcccc tttgggtgaa aaccattgag gagaaacaac atagatagcc
     6601 tgactatttt ttaaatgtgc cccaatctgt tgcatgccaa aatattgtgt cagcgaagct
     6661 gcaccacgtt gtcctaacaa atagggagta tactctctct gataggcatc tgccaacact
     6721 gacggatgca tactatcaaa acgtgaccat tcacttgacc caaagaaagg aacaaagcga
     6781 tgatttttgt ctcccagagc tctatttttc ttatatttgc tcttaaaact aatataagac
     6841 aatgctactg catcttgttt ttcttctttg aaatttgacc gagaagaact cgggaaaaac
     6901 aacaaggtga gaataactaa aaacgttgca caaatcacag gcccaaaaat ctgccacaat
     6961 tgcttacgca tgcatcaact ccacaacacc agaaatgatt ttgttagctg tattccaatc
     7021 ttcacgacca aactctgaaa ctggaactgt aatattaaaa cgactttcta actccacaat
     7081 aagttctacg gtccccatac tatccaaaac acccgcatca aataggtctt catccatcat
     7141 ttcagataca tcttccataa ataattcttc gataatattc aatattgttt cttttacatc
     7201 cattttttat tcctttctac gattcataca atcgttacct attgtctact tgaaccacaa
     7261 tttatctaaa aatcctgaaa atatcaagaa agagaacatg accgtatgga aggtcacaaa
     7321 cataccagcg aaactcgtcc aacgattatc cagcagtggt tcttgcccag ctttttttcg
     7381 agctaaatta attgatttcc tcttacgaat ccaagcgtca ttgatgatca accccaaagc
     7441 atgaaagaga ccatatgcaa tataatacca tgttacacca tgccacaagc ccatcaagag
     7501 catatttagc agataggcaa cattagatac cgtatttcga tttttgaaaa ccttatgttt
     7561 caacaaagtc ttaacaagac gcatgaagac gaaatcacgg aaccaaaaag ataagctgat
     7621 atgccatcga ttccaaaatt ccttaagatc acgcgatttg aacggttgat caaagttaat
     7681 tgggcaacga atacccataa gattggaaat acctatggca aacatggaat agcctgcaaa
     7741 gtcaaagaat aattcaaaac catagagata cataactcca atagtaggta agttaaacca
     7801 tccaccttga tccaaggcga ctgcctttaa aggctccagt aaagtatgcc cgataaaata
     7861 ggctagaata aacttatata agaagcccat cataatataa tgcacagtct gatcgagcat
     7921 atttaataac tcagttcgct caggaatttg tttgtaatct tccgtaaacc gtctataacg
     7981 atcaatagga ccactcgaaa tagttggcat aaatagcaaa aatcgtaaaa aactccctaa
     8041 actaaattcc gttagtaaac cgtcccgcat ttcaatcatc attccgaccg accgaaacgt
     8101 taaataagaa atacctaaaa aaccgaaaat tgccccatgc tgactaaaag tcggtgccaa
     8161 ctttacccaa gtcaacggaa aaacagctaa acatacgatt aaatagaaga cccagctttg
     8221 atttgcccgt tgacgataat gcttgtagaa aaaaatcaac attgtctgcc aaatgatata
     8281 ggccaataaa gacagcaact gtattgtctt tgtacctgta aacatcaaga caatgaaggc
     8341 taaactaaca cctgtttcat acaaggggaa acgtttttta aaaaagagtc ctataaaaat
     8401 tggtactagc gccaagacta gatagaaaaa gtacaatgga tttccataag gctctaactg
     8461 aggtagctgt ttgaaaaact ccatcattga gcattcacct cagcgatcaa tcccttaata
     8521 tcaatcttcc catttgcagt caaaggaaga ctgtctcgat aaataaactt cgaaggcatc
     8581 atataatcca tcatccgttc ttttaactcc tgcttgatga ccttggttaa ctccaactct
     8641 cgatcgaact gctccataat ccctgcttta gggacaacat aagctaacag attttgcact
     8701 ttatggtcag cattataacg tggaacagct accgcagcct caatataggt tgatttattt
     8761 aagtgttggg caacttcttc caactcgata cgataaccat tatatttaat ttggaaatcc
     8821 atacgcccac catagagtaa cagaccttca tctgtcatta cacccaaatc cccagtatga
     8881 taggcctgta agccgtcaaa ctggaaaaat gccgcctcgg ttctctcagg attattcaaa
     8941 tatcctttag agacagcagg acctgataca acaatttctc cctgttgacc attcggtact
     9001 acttgaccat cctcatccaa aataaaagtt ggtgagtctg gtttggtata accaatcggc
     9061 aaacgtttat aattcactaa catctcatta gttatagcaa ctgctgataa ggcgactgta
     9121 gcttcggtcg gtccataagc gttaacaatc acagcttttg gaaaacgttc gcggagcttc
     9181 tgaactgttt ttacagttaa ctcctctccg tcaaaataga aatgcgtcaa atttggtaaa
     9241 tgtttcccat cgaactcacg agatagcaaa gccatatcga caaatgatgg tgtcgaagtc
     9301 caaatcttaa atggcaaagt ttgaatagct gcaaataagg ttttaaaatc caaagtcaac
     9361 tctttcggta gggcaaataa ggtcccacca agggcaagcg tcggagccca atacataacc
     9421 gacaagtcaa acgaatagga aggttgagcc aacatttgcg gtcgctctgg tagcgcaaac
     9481 tccttatccc ttatcatcca gttggtgaag ctgagcaaat tgtcatgcga aatttgcacc
     9541 ccttttggtt tacccgttgt cccagaagtg aatataatat agtaggtatc atctccactt
     9601 acaggatgca tcaactgata agttgacttc ttctcaaaaa tggcttcaac ttcagacaaa
     9661 ccaagcactg gcaaacttgt ctctagcgga aagtctgcta ccgcaaacac caaactcggc
     9721 tctgctattt ccagaatagc ttcaatccga tccaaagcag aatgactatc tacagggata
     9781 tatggatggc cagccttggt taaggcaaca aagattgcca acatctggta ctcctgtccg
     9841 ccaaaaacaa gaacaggaga gtttgctggt aaatccaaac tatcaatatg ggctgctaaa
     9901 gaatctgaat ctgcctttaa atccccataa ctgtacaact gtcctagata atggtaaaca
     9961 gggtagtcag gattttctgt cgcaaaatgc tctacccgct ctaacatact gctaatcttt
    10021 tttatactct cctctttaaa actcattata gataaatcct ccctgtccaa tgtc
//
LOCUS       DASFQD010000089        10049 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.090, whole genome shotgun sequence.
ACCESSION   DASFQD010000089 DASFQD010000000
VERSION     DASFQD010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 10049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10049
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.090"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..414
                     /locus_tag="U1021_001657"
     CDS             <1..414
                     /locus_tag="U1021_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4712174.1"
                     /translation="ISEKQMPSIMNDMVVTPQEQMANKENDNVETSEKQMPSVVNENA
                     VTPEKQMANKEKENIETSKKQIPVNENNQNGTVEENSNTKPTTEKTDKQETSTFKTET
                     AKQILPVTGEKGSLWLLTSGIIGLAIALFTRKRKL"
     gene            complement(846..1850)
                     /gene="ccpA"
                     /locus_tag="U1021_001658"
     CDS             complement(846..1850)
                     /gene="ccpA"
                     /locus_tag="U1021_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite control protein A"
                     /protein_id="HEM4712175.1"
                     /translation="MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLE
                     VIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFATLAKGIDDIADMYKYNIVLAN
                     SDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
                     SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEG
                     LVFESKYKYEEGYALAERILNAGATAAYVAEDEIAAGLLNGVSDMGVKVPEDFEIITS
                     DDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENREVVLNHGIKVRKSTK
                     "
     gene            2058..3137
                     /locus_tag="U1021_001659"
     CDS             2058..3137
                     /locus_tag="U1021_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000040814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEM4712176.1"
                     /translation="MSKLHHVKSYLEANKMDLAIFSDPVSIYYLTGYHSDPHERHMML
                     FVMPDHDSLLFLPALDVERAVATVDFPVAGYMDSENPWQIIKSKLPQKSFSAICAEFD
                     NLNLTRYHGLQSIFSQPFSDITPLINTMKLIKSRDEIEKMLVAGEFADKAMQVGFNNI
                     SLNVTETDIIAQIEFEMKKQGISKMSFETMVLTGDNAANPHGIPSTNQIENNALLLFD
                     LGVEALGYTSDMTRTVAVGKPDQFKKDIYNLTLEAHMAAVNMIKPGVTAGEIDYAARS
                     VIEKAGYGEYFNHRLGHGLGMSVHEFPSIMEGNDLVIEEGMCFSVEPGIYIPGKVGVR
                     IEDCGYVTKNGFEVFTKTPKELLYF"
     gene            complement(3393..3809)
                     /locus_tag="U1021_001660"
     CDS             complement(3393..3809)
                     /locus_tag="U1021_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIA"
                     /protein_id="HEM4712177.1"
                     /translation="MQKIVIATHERLAEGYYRTLNYLIPEMPEIIILSAYIETNSIQE
                     QVDDIYQNLKDEDKLIVLTDIAAGSVNQSFCRYISRPNTLIVSGINLPLVMSIILEAM
                     HTELDLPKIRTLVSEAQEQLLVVNDVLRNFEIETDE"
     gene            complement(3822..4640)
                     /locus_tag="U1021_001661"
     CDS             complement(3822..4640)
                     /locus_tag="U1021_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HEM4712178.1"
                     /translation="MNKKIDTKLTRKDHLRTALRWTFIGSNTVNFGTLQGAGYAWAIA
                     NILRKLYPNDDDYKKAMEVEFEYFNTTPYMAPAVLGADVAIQEHGGIESLDAVRSVKT
                     SLMGPLAGIGDSILWVLFPTIMGSIGGYMALEGNPLGAIIWISLNLLLVLFRIKLYDL
                     GYKSGVRLVTDLASQLNLFTESASIIGLTVVGSMVATAVKLYTPIEFHFKDVSIGLQS
                     EIFDRIVPGLLPILLTLLVYWLMEKKKLGFLHLIIILLVLSLIGAYLGILGIQP"
     gene            complement(4633..5418)
                     /locus_tag="U1021_001662"
     CDS             complement(4633..5418)
                     /locus_tag="U1021_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002299151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM4712179.1"
                     /translation="MAEIIQNVLIILLPAYALIDNRGATIINHWPITVGLFAGIIMGD
                     VPAAMTIAGTFQLMSLGVAALGGSSVPDYALATVVSIFLHARTNVELGTAVVIGLPVG
                     ILALNLDVLTHTLNSFVANKSKSFMLEGKFTSMKLLNWISILMVALQAIIPMVILVAF
                     GPKLISGIVDSVPAWITTGLNVAGGMLPVIGVVMLMRYMPLKKFFWAVLIGFVFSGYV
                     GLPILAISMIGLAMASIYYMNEKKLSSHLTSEAKFDEGGLFDE"
     gene            complement(5434..5913)
                     /locus_tag="U1021_001663"
     CDS             complement(5434..5913)
                     /locus_tag="U1021_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM4712180.1"
                     /translation="MGIVLVRVDQRLVHGIVVTQVTKSVNAKRIMVIDDQISQDENQK
                     AIMRMSKPAGTGMSIISVETAVQNILAGKYEDHNVLVVVRDISVIVKLVERGVFLPKI
                     QLGIIFEREDRERFTKSVSLNPQEQLELQALSLEGIPIIFQFTPTDKEEAFDKYVKK"
     gene            complement(5915..7990)
                     /locus_tag="U1021_001664"
     CDS             complement(5915..7990)
                     /locus_tag="U1021_001664"
                     /inference="COORDINATES: protein motif:HMM:NF013239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 31"
                     /protein_id="HEM4712181.1"
                     /translation="MVGMEDIHFIDGGWEYSDENLQLRVLFYETNLIYVSCSPINVAL
                     TREKSLERLSVPPYIEHFFQNGILHSKNGQIQVEFDGWHLTFYDGEKRLLEEYLRKLS
                     PVRRMIGEEYGNVNIQEQRSSALNILPREFISLSEENYHAYARFEADPSEKIIGLGAY
                     QDSLWNKNGGDYELAQRNSQNALPFYISDKGYGFIWHSSAIGRVTLGNNRYTWESQET
                     KEIHYTIFCSDSPKGVLQTLTSFTGRAPMMDQRFLGLWQSKLRYQTTQEVNEVFTGYK
                     FRNLPLSVIVIDYFHWTEEGDYCFDQTYWRGIERLATNCREAGVELMISVWPTVSKES
                     RHFKWFNSENLLIQNNTRTKKSVALFNGSYLLDLSRSWMRIILKYLLLKNYRRKGIQL
                     FWADQAEPELDSYHHNRYSISGINFASCANRYSLWYLEAIPKYIINDKKIIFPTLIRN
                     VWFGSQEQGALAWSGDIEGSFESLREQIRIGLSMGICGQSWWTTDIGGFHEYKNDANY
                     FRELLIRWFQFATFTPILRMHGDRQPHTPSIGKSGGGIRTSGASNEIWSFGEKVEQIL
                     TKFLHIREILLPYLTVIYTECHLTGLPLMRPLFLEFPSEPGSWEISDFYMFGSDLLVC
                     PVTDENCKFLRVYLPRGYEWVHLFTKEIFIGGMWYDIGVSLENIPVFRKSTSSFLMGI
                     EDKISKIGG"
     gene            complement(8019..10040)
                     /locus_tag="U1021_001665"
     CDS             complement(8019..10040)
                     /locus_tag="U1021_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002377960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 31 protein"
                     /protein_id="HEM4712182.1"
                     /translation="MEDELLRIEAWGNNSLRIRAFPTGIVEEHVNALTEPVPNPHCKV
                     IIHENGNQEIRNGKISAIIDHRNKISFFNEKGALILQEFIRLRAVKHDDGSEDISTIS
                     VTKDFNSTLKLKSREYQANNHGSDFAVKARFESNPNEKIFGMGQYQHEFLDLKNTVLE
                     LAQRNSQFSTPFYLSSLGYGFLWNNPGIGSVTFAKNLTEWSMRATTYIDYWITVGDTP
                     KEILNQYCLVTGFAPLMPKRLLGLWQSKLRYRTPQEVLDVLEGYRRRNIQLSTIAIDY
                     FYWPKQGEYRFDEKFWPNVKELISEIKNHYNVEPIISIWPTVQSDANNFQTYQQNGYL
                     IGINKGIRFSMNIQGQTTFIDTTNREACQYVWQQIEANYKKNGINYYWIDVAEPGYAV
                     YDFDNYRYQKGPVLQCGNLYPIGYLKMIFDGNSQQDSEVILVRGAWAGAQKYGALPWS
                     GDIDSSFESLRNQVNTGLNVGMAGLPWWTTDIGGFHGGNADDPEFRELMIRWFQYSTF
                     SPILRMHGDRLPHSKSLSNEGGGKMPTGAPNEIWSFGSEVENIMMRFIRIRDGLKEYL
                     YHLMKEAHDFGYPVMRSLFFEYPNDSMAWDVDNTYMLGDSILVAPIVDYQLRERIVYL
                     PDDREWVHLFSEKEYQGGSSYLIQAPLDEIPVFIVKNKWREISTYLGSI"
BASE COUNT         3155 a         2097 c         1618 g         3179 t
ORIGIN      
        1 atctctgaaa aacagatgcc aagcattatg aacgacatgg tcgtaacacc tcaagaacaa
       61 atggctaata aagagaacga taatgttgaa acctctgaaa aacagatgcc gagtgttgtg
      121 aacgaaaatg ccgtaacacc tgaaaagcaa atggctaata aagagaagga aaatatcgaa
      181 acctctaaaa aacagatacc tgttaatgag aacaaccaaa atggtacagt cgaagaaaat
      241 tcaaatacta aaccaacaac tgaaaaaaca gacaagcagg agacttcaac atttaaaacc
      301 gaaactgcta agcaaatctt accagtaact ggtgagaaag gaagtttatg gttattgaca
      361 agtggtatta tcgggcttgc aattgcgtta tttacacgta aacgtaaatt ataataatca
      421 cctaactgat acagttctaa aggatgagaa caagcccagt actgcttctc tagattcgca
      481 tcaacatctc gcacaactta cagagtgtga cagacttaaa atcaaccaca aagccctcgc
      541 taagcttata catctagcga gggctttata tttatttttt ataatctttt agttttcggt
      601 tagtatagcc atttcgtttg cttttagtac tcgcttcaaa ggttctccga acctttgaag
      661 gctggagata agtcgaagca agtttgcctc aatagctaca gattgctaga acagcctaaa
      721 ggctgttcta ggttggaaat atttcctcgc tcgtcgaagt aataaaagat aaactaaatg
      781 attataatgt ttgatagagt gagggcggag taataagata tcttatccgg ctactcccat
      841 atttattact tagttgattt ccgtactttg attccgtggt taagaactac ctcacggttt
      901 tccaactctt ccttgtgcat gattttggta agcatgcgca tagcaattgc accaatatcg
      961 tatagtggct gattgataga ggtcaggttt ggacgggtaa acttggtcac tagggaatca
     1021 tcacttgtaa tgatttcaaa gtcttctgga accttgacgc ccatatcact gacaccgttc
     1081 aatagaccag cagcaatctc atcttctgca acataagctg cagttgctcc ggcattcaaa
     1141 atacgttctg ctagagcgta gccttcctcg tatttatact tggattcaaa aaccaatcct
     1201 tcgttaaact cgattccgtt gtccttcaag ccttgtttgt agcctgcaaa acgaacttta
     1261 ccgttgatgt catctacaag cggccctgat acaaaggcaa ttttcttgtt gttcttagct
     1321 aatagattga ctgcatcaac actagcggca gcatagtcaa tattgacgct aggtaattgg
     1381 tgctccaagt ccacggtacc agctaaaaca atcggtgtac gtgagcgtga aaactccgca
     1441 cgaatcttgt ctgtcaaatg atagcccatg aaaatgattc cgtccacctg ttttgagaat
     1501 agggtattta ccacattgat ttctttctca tcattttcat cactgtttgc taggacgata
     1561 ttgtatttgt acatatcggc aatatcatcg atacctttgg ccaaggttgc aaaataagca
     1621 ttagcaatat ttggaatcac aacccccaca gtggtagtct tcttgctggc caatccacgt
     1681 gcaacagcat ttggacgata atccaaacgg tcgatgactt ctaatacttt tttacgagta
     1741 ttttccttta cgtttttatt cccatttacc acgcgcgata ctgtcgccat ggatacacca
     1801 gcttcacggg cgacatcgta aatcgtaacc gtatcatcag tgtttaacat aacttttgta
     1861 ctccctttca atattctatt tctatgaaaa ttacgctttc actcaacaat agtgtatcac
     1921 tttttgaaac cactttcaag agaaaaacgc cattttttga taatacttgc aatttttttc
     1981 attttttgga acaatagtct atataataaa cgaaattttc acttttttta ccactacatg
     2041 ctagaaaggg ctccactatg tcaaaattac atcatgttaa atcctactta gaagccaaca
     2101 aaatggactt ggccatcttc tctgatccag ttagcatcta ttatctgact ggctatcata
     2161 gtgatcctca tgaacgccac atgatgctct ttgttatgcc tgaccacgac tcactactct
     2221 ttctccctgc cttggatgta gagcgtgcgg ttgcgactgt tgattttcct gtagcaggct
     2281 atatggactc agaaaatcca tggcagatta tcaagagcaa attgccacag aaatctttct
     2341 cagcaatctg tgcagaattt gataatttga atttaacccg ctaccatggt cttcagtcta
     2401 tctttagcca accattttca gacattacac ctctgattaa tactatgaaa ttgatcaagt
     2461 ctcgtgatga aattgaaaaa atgctggttg ctggagagtt tgcagataag gctatgcagg
     2521 ttggttttaa caatatctcc ctcaacgtaa ctgaaactga tattattgct cagattgaat
     2581 ttgaaatgaa gaaacaaggc atctcaaaaa tgagctttga gaccatggtc ttaacaggcg
     2641 acaatgccgc aaatccacac ggtattccct caacaaacca aatcgagaat aacgctctgc
     2701 tattgttcga cctaggcgtg gaagctttgg gctatacgtc tgatatgaca cggactgtcg
     2761 ctgtcggtaa acccgatcag tttaaaaaag atatttacaa tttgactctg gaggctcaca
     2821 tggccgcggt caatatgatt aagcctggtg tgactgctgg cgagattgac tatgccgctc
     2881 gctctgtgat tgaaaaagca ggttatggcg agtacttcaa ccaccgactc ggtcacggtt
     2941 tgggaatgag tgtccatgaa ttcccatcga ttatggaagg caatgattta gtcatcgaag
     3001 aaggtatgtg tttctctgtc gagccaggta tttacatccc tggaaaagtt ggtgttcgta
     3061 tcgaggattg tggttacgtt accaaaaatg gctttgaagt ctttacaaaa acaccaaaag
     3121 aacttttgta tttttaaagt gagtcatata ttcttttttt cataacttcg ttatcttact
     3181 ttactaagtt cctgaaatga ccgaaatttt tgattcaata cagtattctc cttccaaaac
     3241 ctttaaagaa ctttttaaaa ttgcgctagt tgtagagact aaaaaagtcg ataccaaaaa
     3301 acctcctaac aattttagga ggtttttaac atttgtaggt ctaagcaaca aagaactgaa
     3361 atagatgaga agtaaaattg atatcattaa tgttactcat ctgtttctat ctcaaaattt
     3421 cgtaggacat cattaacaac aagtaactgc tcttgagctt cactgactaa tgttcgtatt
     3481 ttaggtaagt ctagttcagt atgcatcgcc tccaaaataa tactcattac caagggtaaa
     3541 tttattcctg aaactattag tgtatttggc cttgaaatat agcgacaaaa gctttgatta
     3601 actgatccag cagcaatatc tgtaagtacg ataagtttat cctcatcctt caaattttga
     3661 tagatatcat ctacttgttc ttgtatagaa ttagtctcaa tataagcgga gagaattatt
     3721 atttcaggca tctctgggat aagataattc aatgttctat aataaccttc tgccaatctt
     3781 tcgtgagtcg caataacaat tttttgcata tgtctccttt gctatggttg aatacctaaa
     3841 attcccaaat atgcgccaat taaagaaaga acaagaagaa taattattag atgtaagaac
     3901 cctaatttct ttttctccat caaccagtaa accaaaagag ttagtaaaat tggtaataac
     3961 ccaggaacaa tacgatcaaa aatttctgat tgtaaaccta ttgaaacatc tttaaaatga
     4021 aattctattg gcgtgtaaag tttgacagca gtagcaacca tacttcccac taccgttaga
     4081 cctataattg aggcagattc cgtgaataga ttcaactggc ttgctaaatc tgtaaccaga
     4141 cgtacacctg atttataacc taagtcatat aatttaattc ggaataagac taaaagaagg
     4201 tttaatgaaa tccaaataat tgctccaaga gggttccctt ctaatgccat gtagccaccg
     4261 attgacccca taatcgttgg aaataggacc cacaatatag agtctccaat ccccgccaac
     4321 ggtcccatta aagaagtttt taccgatcta actgcatcta gggactcaat acctccatgt
     4381 tcttgaattg caacatcagc acctaaaact gcaggagcca tatatggagt agtattgaaa
     4441 tattcaaatt cgacctccat tgcttttttg taatcatcat cattgggata cagtttcctc
     4501 aaaatattag cgattgccca agcataacca gcaccctgca atgtaccaaa gtttactgta
     4561 ttacttccaa taaatgtcca tcttagtgca gttcgtaaat gatcttttct agttaatttg
     4621 gtatctattt tcttattcat cgaaaagtcc cccttcgtca aatttagcct ccgacgttaa
     4681 atgtgatgat agcttcttct cattcatgta ataaatagat gccatcgcaa gaccaatcat
     4741 agatatcgct aaaatcggaa gtccgacata tccgctaaaa acaaaaccaa ttagtaccgc
     4801 ccaaaagaat ttttttagtg gcatatatct catcaacatt actaccccaa taactggaag
     4861 cattcctcct gcaacattta aaccagtagt aatccaagct ggtactgagt caacaattcc
     4921 actaatcaat ttcggaccaa aagctaccaa aatgaccata ggaataatag cttgcagagc
     4981 aaccatcaaa atactaatcc agtttaacaa tttcattgat gtaaactttc cttcaagcat
     5041 gaaactctta gatttatttg ctacaaaaga attcaatgtg tgggtaagaa catcaaggtt
     5101 gagcgctaaa atacctactg gtagtccaat tactactgct gtccctagtt caacattggt
     5161 tctagcatga agaaaaatag ataccactgt tgctagtgca tagtccggaa cagatgatcc
     5221 tcccaaagct gcaaccccta aactcattaa ttgaaaagtt ccagcaatag tcatagcagc
     5281 aggaacatct cccattatga tgcctgcaaa caaaccaacc gttatcggcc agtgattgat
     5341 aatagttgct cctctattgt caattaaggc gtatgccggt agaagaatta ttaaaacatt
     5401 ttgtattatt tctgccatag ttattctcca taattatttt tttacatatt tatcaaaagc
     5461 ttcttctttg tcagtaggag tgaactggaa tattataggt atcccttcta aagaaagtgc
     5521 ctgtaactct aactgttctt gcgggttcaa ggaaacactc tttgtaaacc tttctctatc
     5581 ttctctctca aagataattc ctaactgaat ttttggaagg aaaacacctc tctcaactag
     5641 cttaacgatt actgatatgt ctcgtacaac aactaaaacg ttatgatctt cgtatttccc
     5701 tgctaaaatg ttttgaactg ctgtttctac actaataata gacatccctg ttccagctgg
     5761 tttactcata cgcattatag ctttttgatt ctcgtcctga ctaatctgat cgtctatgac
     5821 cattatacgc ttagcattaa cacttttagt aacctgagtg actacaatac catgaactaa
     5881 tcgctgatca actctaacta aaacaattcc cattctatcc tcctattttt gaaattttat
     5941 cttcaatgcc cattagaaaa gaactagtac tttttctaaa aactggtata ttttcaagcg
     6001 atacacctat gtcataccac attcctccta taaatatttc tttagtgaat aagtgaaccc
     6061 attcgtatcc tcgaggtaaa tagactctca gaaatttgca gttttcgtca gtaactgggc
     6121 aaactagtaa atccgaacca aacatataaa aatcagatat ctcccaactt cctggctcac
     6181 taggaaactc taaaaatagt ggtcgcatca aagggagacc tgtcaaatga cattctgtat
     6241 agataacagt taaatatggt agtaatattt ccctaatatg aaggaatttt gttaaaattt
     6301 gttcaacttt ttctccaaag gaccagattt catttgatgc cccactcgtt ctaatccctc
     6361 caccagattt cccgattgat ggggtgtggg gttgcctatc tccatgcatt cgtaaaattg
     6421 gagtaaatgt cgcaaattga aaccatctga ttaatagttc tctaaaatag ttcgcatcat
     6481 ttttatactc atggaatcct ccgatatctg ttgtccacca actttgtcca cagattccca
     6541 tagataaacc aattcttatt tgttctctta atgattcaaa tgatccttct atatcaccgg
     6601 accatgccaa ggctccttgt tcttgacttc caaaccaaac attcctaatc aatgttggaa
     6661 atattatctt tttatcatta attatatatt taggaatggc ctccaaatac cataaagaat
     6721 aacgattagc acaacttgca aagttaatgc ctgatatact atatcgatta tggtgatagc
     6781 tatctaactc gggttccgct tgatctgccc aaaataattg tatacctttc ctcctataat
     6841 tttttaataa taggtatttc aggattattc tcatccacga tctggataaa tctaacagat
     6901 atgacccgtt aaataaggcg actgatttct ttgtccgagt attattttgt attaacaggt
     6961 tctcactatt aaaccacttg aagtgccgtg actctttact tactgttggc caaacagata
     7021 tcattaattc gactccagcc tctctacaat ttgtagcaag cctctcaatg cctctccagt
     7081 aagtctgatc aaaacagtag tcaccttctt ctgtccagtg aaaatagtcg ataacaatga
     7141 ctgatagtgg taagtttcta aacttatatc cagtaaatac ctcattgact tcttgagtag
     7201 tttgataacg taatttactc tgccacaatc ctagaaaacg ttgatccatc atgggagctc
     7261 ttccagtgaa actggtcagg gtctgtagta cacccttggg gctgtctgaa caaaatattg
     7321 tatagtgaat ttctttcgtt tcttgagatt cccaagtata cctgttattt cctaaggtca
     7381 ctctaccaat tgctgaagaa tgccaaataa atccatagcc tttatctgaa atatagaatg
     7441 gtagtgcatt ttgagaattt ctttgagcta attcatagtc tcctccattt ttattccata
     7501 gagaatcttg ataagcacct aagcctatta ttttttcact aggatctgct tcaaatcttg
     7561 cataagcatg gtagttctct tctgataagg aaataaattc cctaggtaat atattcagag
     7621 cagagctacg ttgctcctga atattaacgt taccatattc ttccccaatc attcgcctta
     7681 ctggagagag tttacgtaaa tactcctcta ataatctttt ttcgccatca taaaaggtta
     7741 aatgccagcc atcaaattca acctgtattt gcccattttt tgaatgtagt attccattct
     7801 gaaaaaaatg ctctatgtag ggggggacac ttaatcgttc taaagatttt tcccgtgtaa
     7861 gcgcaacatt gattggggag catgagacat aaataagatt agtttcatag aaaagaaccc
     7921 tgagttgaag attttcatct gaatactccc aacctccgtc aataaaatgt atatcttcca
     7981 taccgaccat ttatacatcc ccactagtta taaaagtctt atattgagcc taaatatgta
     8041 gaaatttctc tccacttatt ttttacaata aatactggaa tctcatcaag aggagcttga
     8101 attaggtaag aactaccgcc ttgatactcc ttttcactaa acagatgcac ccactctcta
     8161 tcatcaggta aataaactat cctttctctg agttgatagt ctacaatagg ggctactaaa
     8221 atagagtctc ccaacatata agtgttatcc acatcccatg ccattgaatc atttggatat
     8281 tcaaaaaata aggatctcat caccgggtaa ccaaaatcat gagcttcttt cattagatga
     8341 taaagatatt ccttcaaccc atcgcgtata cggatgaatc gcatcattat gttttccacc
     8401 tcactaccaa acgaccaaat ttcattaggt gctcctgtag gcattttccc tccaccttca
     8461 ttagaaagag attttgaatg tggtaagcga tctccatgca ttctcaaaat cggtgaaaag
     8521 gtagaatatt gaaaccatct aatcatcaac tctctgaatt ctggatcgtc agcatttcct
     8581 ccatgaaacc ctccgatatc tgttgtccac catggcaaac cagccattcc aacatttaat
     8641 cctgtattga cctgatttct taaagactca aaactagagt caatatcacc tgaccaaggt
     8701 aaagcaccat atttttgtgc tccagcccaa gcccccctaa ctagaataac ttctgaatct
     8761 tgttgactat tgccatcaaa aatcattttc aagtaaccaa taggatagag attcccacat
     8821 tgaagaactg gacctttttg gtatcgataa ttatcaaaat catagactgc ataacctggt
     8881 tcagctacat caatccagta atagttaatg ccatttttct tataatttgc ttctatctgt
     8941 tgccaaacat attgacaagc ctctcggtta gttgtatcaa taaaagtagt ctgcccttga
     9001 atattcatcg aaaagcgaat tcccttatta ataccaataa gatatccatt ctgctgatag
     9061 gtctgaaaat tattggcatc cgattgcaca gttggccaga ttgaaataat aggttccaca
     9121 ttataatgat tttttatttc gctaataagt tctttgacat tcggccaaaa tttttcatca
     9181 aatcgatact ctccttgctt tggccaataa aagtaatcaa ttgcaattgt ggataattga
     9241 atgtttctcc gacgataacc ttctaaaaca tccaacactt cttggggagt tctgtatctc
     9301 aacttacttt gccaaagacc aagtaagcgt ttcggcatca aaggggcaaa acctgtaacc
     9361 aaacaatact gatttaatat ttctttagga gtatcgccta ccgtaatcca ataatcaata
     9421 taagtagtag cccgcataga ccattctgtc aaatttttgg caaatgtaac actacctata
     9481 cccggattat tccataagaa accatagcct agactagata gataaaatgg agttgaaaat
     9541 tgagaattac gctgtgctaa ttcaagaacc gtgtttttta aatcgagaaa ttcgtgctga
     9601 tactgtccca taccaaaaat tttttcattg gggttcgact caaatcttgc ttttaccgca
     9661 aaatccgagc catgattatt ggcctgatat tctctcgatt ttaactttaa agtagaattg
     9721 aaatcctttg tgacactaat agtactgata tcttcactac catcatcatg tttaactgca
     9781 cgtaagcgaa taaattcttg taatattaat gctccttttt cattaaaaaa actgatttta
     9841 ttacgatggt caataatagc actaattttc ccgtttctta tttcttgatt gccattttca
     9901 tggataatta ctttacagtg cggattcgga actggttctg tcaaggcatt aacatgttct
     9961 tcaactatac ctgtaggaaa tgcccgtatg cgtaatgaat tatttcccca agcttcaatt
    10021 cgtaacagtt catcttccaa tcttttttc
//
LOCUS       DASFQD010000090        10005 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.091, whole genome shotgun sequence.
ACCESSION   DASFQD010000090 DASFQD010000000
VERSION     DASFQD010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 10005)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10005)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10005
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.091"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..947)
                     /locus_tag="U1021_001666"
     CDS             complement(<1..947)
                     /locus_tag="U1021_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat protein"
                     /protein_id="HEM4712183.1"
                     /translation="MKKKLTIAIIIGFVSLIAGLILAGIGFFTGGITRLEEVAAPTEV
                     HKTFTDLNTINIDFIPHSVYIKESSDNNYHVTYANSDNNIQTPLKLSEKDGVLTLSAQ
                     ELKFAIEGIMQYLGERLAQRRINVFSVTIEVPKGKTLKKLTGYSSYLYNYGGFSIENA
                     HIQEVDLSAGIFLDNAQIDSGKITAGYFEAVNSALRNTSISANESSVNLIETSLENVT
                     IKNYQELNANQLTLLGKNVLTPSEYSLSVTNINLTDKSLQDINLNISTQLDIKTLAEH
                     LGYHYETLEELKQAVGDMSYFNEQAENVGIFTKDKYQTLS"
     gene            complement(944..1699)
                     /locus_tag="U1021_001667"
     CDS             complement(944..1699)
                     /locus_tag="U1021_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1700 domain-containing protein"
                     /protein_id="HEM4712184.1"
                     /translation="MTRTEYMEQLEKYLKKLPHKEYFEAISFFNEYFDEAGPERETEI
                     IEELGSPKEAASELINNMLNKQIQEEKDQQEPIQLNWKLWVGLGALSMTGLFSFFLLF
                     IMGEFIGVIPLFATLILGAFFLGRYFRNFSQTKRTLWLAILAVISLPIAIPLLLILLA
                     SLLGLVALILALIVGAFVLGVGLLTSGGYLIWEAFSLMSEGFNIFLMGFGSGLSLIGG
                     AILIYILTGFFAYWSWRLVKACFKWILKRGKRA"
     gene            complement(1686..2012)
                     /locus_tag="U1021_001668"
     CDS             complement(1686..2012)
                     /locus_tag="U1021_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000273865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEM4712185.1"
                     /translation="MHFPVPAVLTEFLIMAILESDDSYGYEICQTIKLIANIKESALY
                     PILKRLEQNDFLTTYSQEYQGRMRKYYSLTQLGHEELVRLKDDWDTYTNTINGIIEGS
                     VRHDKN"
     gene            2321..2701
                     /locus_tag="U1021_001669"
     CDS             2321..2701
                     /locus_tag="U1021_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HEM4712186.1"
                     /translation="MKLYVQFMIILVFSFLGEAISTIFHLPIPGSIIGLILLFLALEF
                     KLIRLRHIHTVGNFLLANMTILFLPAAVGIMERFDAIKDYLLPIIIVILGAIFLNILV
                     IGFVVQFVKQKFEGDYIDAEGNHD"
     gene            2694..3389
                     /locus_tag="U1021_001670"
     CDS             2694..3389
                     /locus_tag="U1021_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002919316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HEM4712187.1"
                     /translation="MTELFSNPIFGIMLSIAAYLIGMLIYRRFPHPITTPLLVATGLI
                     IVFLKMTGISYKEYYAGGSYLNMLIVPSTVALGIPLYRSFHLMKHHIRSILLGIFVAC
                     IVNTVFTALIAKWFGMDFFLAISLFPKSVTTAMAVGITDKMQGIATVTLVVVVATGIL
                     TSVLGPVFLKLLKIEDPVAVGLALGGTGHAIGTGTAIKYGHTQGAMAGLAIGITGIMY
                     VVISPIVAQIILQ"
     gene            complement(3423..4223)
                     /locus_tag="U1021_001671"
     CDS             complement(3423..4223)
                     /locus_tag="U1021_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HEM4712188.1"
                     /translation="MGANQETLMYTLEKSIKKKADLFEHSFSAYAVRSILASLYLGLG
                     IVISLYTADKLNHVAEGLGKFSYGLMFGWGLLMILYMNAELGTSNMMYMTVASHRKTI
                     PTKTALRMLATCILFNFVGAVLVCYLVSLTLPYQHVDAHSYLFEATVAKLSKTPLTQF
                     IEGIFANIVVNIGVFTFLRIKDDAGRLISVIFIIFIFAFLGYEHVIANFSLFSLAFFA
                     NGGPVEGMTLLSVLSNFLFSGLGNYVGGGLFIGLLYSWLNNQSKLYVD"
     gene            4364..5209
                     /locus_tag="U1021_001672"
     CDS             4364..5209
                     /locus_tag="U1021_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HEM4712189.1"
                     /translation="MDVTWTVKYITEFLATALLIIIGNGTVANVDLKGTKGNNSGWIL
                     IAIGYGLAVMMPALMFGNVSGNHINPAFTLGLAVSGLFPWAHVAQYIVAQLLGAMFGQ
                     LVVVAVYKPYFLKTENSNHILGSFSTISALDNGTKESRKAATTNGFLNEFVGSFVLFF
                     GALALTKHFFGSELVGKLIEQGYDKTVAETMTAPYTSGSIAVAHLGIGFLVMALVAAL
                     GGPTGPGLNPARDLGPRIVHALLPKSVLGENKADSKWWYAWVGVCAPIIASIAAVALF
                     KFLYL"
     gene            5338..6870
                     /locus_tag="U1021_001673"
     CDS             5338..6870
                     /locus_tag="U1021_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 family protein"
                     /protein_id="HEM4712190.1"
                     /translation="MSDVIAFGYGSSRAEMQLKRLNRHGIIAGATGTGKTVTLKVLAE
                     QLSDAGIPVFLSDIKGDLNSLVAANTKEIDPSRLEKTHYLDYSPVGYPVELWDVLGEN
                     GTPIRMTISELGPVLLTRLLGLNDTQESILNIVFSVADERGLLLIDLMDLRAMLNFVA
                     ENAAELSQYYGNIPARSVGAILRSLVVLEQQGGKIFFGEPSLDIADLMRTAEDGRGVI
                     NVLQATQLFNQPTLYSTVLLSLLSELYEVLPEVGDLDKPKMVFFFDEAHVLFKDAPKV
                     LLEKIELIVRLIRSKGVGVFFVTQNPTDIPDSVAAQLGNRIQHGLRAFTPKELKTVAT
                     VAETFRQEGDEDLAKVIQELQVGEAVVSTLQADGTPSFADRVLIYPPKSMLGTVEPSA
                     LLSVINNSPLMEKYADAVNRESAHEQILAMTEAKEAELIKKAEQAEAEKQAEKEAKAA
                     AKMEEKAQKEAAKAAQKTSQPASRKTDSMMDRFTKNLMSQVGREVGRVVTRGIMGMLK
                     GK"
     gene            6982..7590
                     /locus_tag="U1021_001674"
     CDS             6982..7590
                     /locus_tag="U1021_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HEM4712191.1"
                     /translation="MTDQLQALLKDYQPQPLGEKRSYAVFLPLVWSDDQWQVLYEIRS
                     ESISQPGEVSFPGGGIDEGETAEEAAIREVIEELDIQQKQIELLGEIDYLVFGRSTIR
                     CFVGRLHLDWQTLQPNDEVARFFTVPLETLLKTAPVYYQLDSQIVPDCDFPFERLRGG
                     VDYPFSHHKRSVPFYENLPENIWGMTAQFTHCFVEIVKSNLS"
     gene            7882..9903
                     /locus_tag="U1021_001675"
     CDS             7882..9903
                     /locus_tag="U1021_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4712192.1"
                     /translation="MSKQKVVSSLLLSTVVLGGLAFYSTTTVKAESLEPDVTSVSSSD
                     ATNKLVVSNEEESDFLAEEELEESDAPVETLNEEIKDVTEPSSPEALLQPRAMMSDSM
                     SSGMEEIQVKDEPSDNTAEKVVKQQSDLIQSSSADSFKNGKDKEKLESSVSIDLLSSE
                     NNEIKWKVSFDTSAWSFNYHHGGLYFILPEGLNLKSVKANTNDELFNRFPNKVDSTNN
                     GDGAPFRFFNKEENSDSFNNQWGWSAGQAPNEMINNWKTGNRFSKIYFIDKITDTRQV
                     TYTLTASVTDSNQKSFPLVAVMKSFWYTNSQGTQITSLAGREITLEKEKPLPPKETPA
                     PEAPSTPEKQPESPKEDPKKEDTPEVSPKPEAPTPDAPKQDVPETPDKQPEEMPKVPE
                     APKEDAPAPAPSTPSVPEEKPKEDSKPEVPSAPEAPKDAPSIPEKQPDAPQVPLTPEE
                     KPQVPEAPKQDDVQPDAPQVPEAPQQDDVQPDAPQVPEAPKEEVPTPPAPSVPEEQPK
                     ETPTPEVPKQDDVQPEAPKSDKVETDKQMPETKQPDMKQPKADDMPKEQKPKADEPKV
                     EQPQMEAPKKDSEAPKSDKVETDKPMPETKQPDMKQPKADKPEAEKAQMPRTEGMKPE
                     SKASMMPKAEAPKATLPNTGEASSAIGWLGGALATLATGLYLFKNKKEE"
BASE COUNT         3039 a         1944 c         2186 g         2836 t
ORIGIN      
        1 gataatgttt gatacttatc tttagtgaaa ataccgacgt tttcagcctg ttcgttgaag
       61 taactcatat caccaacagc ttgctttagt tcttcaaggg tttcatagtg gtagcctaag
      121 tgttccgcaa gtgttttgat gtctagctgt gtactgatat tcagattgat gtcttgtaag
      181 ctcttatctg ttaggtttat atttgtaaca gataagctgt attcggaagg agtgaggacg
      241 ttttttccta ggagagtcaa ttgatttgca ttcaattctt ggtagttttt aattgtaaca
      301 ttttccaaac tggtttcgat taaattgact gaagattcat ttgcagatat agaggtattt
      361 ctgagtgcag aattcacagc ttcaaagtaa ccagctgtga ttttaccgct gtcaatttgt
      421 gcattatcaa ggaagatacc agcggatagg tcaacctctt gtatatgggc attctcaatg
      481 gaaaagcctc cataattata taaataggaa ctatatcctg taagcttttt cagagtcttc
      541 cctttaggca cttcaatggt gacggagaag acattgatgc gacgttgggc caacctttct
      601 cccagatact gcatgattcc ctcaatggca aattttagtt cctgtgcaga gagggttaag
      661 acgccgtctt tctcactgag ttttagaggg gtttggatat tgttgtcgga gttggcatag
      721 gtcacatgat agttgttatc actagactct ttgatgtaga cgctatgggg gataaagtca
      781 atgttaatgg tattcaaatc tgtgaaggtc ttatggactt ccgttggagc agcaacctct
      841 tccaaacggg ttatgccccc agtgaaaaat ccaatgccag ctagaattaa gcctgcaatc
      901 aggctgacaa agccgataat aatggcgatg gtaagtttct ttttcatgct cgtttacctc
      961 gtttcaagat ccatttgaag caagccttga ccagtcgcca agaccagtag gcaaaaaatc
     1021 cagtcaagat gtagatgaga atagctccgc caatcaaaga taaacctgag ccaaacccca
     1081 tgaggaagat attgaatcct tctgacataa ggctaaaggc ttcccaaatc agatagccac
     1141 cgctggtgag aagtccgaca cccaaaacaa aggcaccgac aatgagggcc aagatgagcg
     1201 ccaccaatcc caatagacta gctaggagaa tgagcaaaag tggaatggct ataggcaggg
     1261 aaatgacagc taggatagcc aaccagagcg ttcgttttgt ttggctaaaa ttacggaagt
     1321 agcgaccgag gaaaaaggcg ccgaggataa gagtcgcaaa cagaggaatg actccgataa
     1381 actctcccat gataaagagt aggaagaaag agaagagacc tgtcatactt aaggctccca
     1441 gaccaaccca gagtttccag ttgagttgaa taggttcttg ttgatccttc tcctcctgga
     1501 tttgcttgtt gagcatgttg ttaatgagtt cgctggcagc ttcttttggt gaaccaagtt
     1561 cttctataat ttctgtttca cgctctggtc cagcctcgtc aaaatactca ttaaagaagc
     1621 tgatggcttc aaagtattct ttgtggggca gttttttgag atatttttct aactgctcca
     1681 tgtattcagt tcttgtcatg acggacgctc ccttctatga tgccgtttat cgtgtttgta
     1741 taggtatccc agtcatcttt gagtcggacc aattcttcat gacctaactg agttaggcta
     1801 taatacttgc gcatacgacc ctgatattct tgggaataag tagtcaaaaa gtcattttgc
     1861 tccaatcgtt ttaggattgg atagagggcg gactccttga tgttggcaat taatttaatg
     1921 gtctgacaga tttcatagcc ataagaatca tcggattcca aaatagccat gatgagaaat
     1981 tctgtcagca ctgcggggac tggaaaatgc ataggacgct cctttccttt gttgttagtt
     2041 aggttcggtt ttgatatata gtgtttagtt gcatatatca aattttgtta tatactaaat
     2101 atacacctac acaaataaat tgtcaagtga ttatgtgcaa aataaataaa atagcttaag
     2161 accaaatagc ttaggacaaa tttttaaggt gtaaacgttt tatagccttg aaaaatattt
     2221 tcagagtagt aaacttaata acagtactaa cattaaggga atttctggac taaaagagaa
     2281 tgacctcaga tggattagta gtatttaagg tggtgtaaag atgaaactat atgttcagtt
     2341 tatgattatt ctggtatttt catttttagg ggaagctatt tcgactattt ttcatcttcc
     2401 tattccggga agtatcattg gtttaatcct cctattctta gccctagagt tcaaattaat
     2461 tcgtcttcgc cacattcata cggttggaaa ttttttgctg gctaacatga ccattctttt
     2521 tttacctgca gcggttggga ttatggagag atttgatgca attaaagatt atttacttcc
     2581 tattatcatc gtcattttag gcgccatttt tttaaatatc ttagtaattg gttttgttgt
     2641 tcaatttgtg aagcaaaagt ttgaaggtga ctacattgat gcggagggaa atcatgactg
     2701 aacttttttc caatcctatt tttggtatta tgttatcaat tgcagcatat ttaattggaa
     2761 tgctgattta tcggagattt cctcatccaa tcacaacccc actgttggta gctacaggat
     2821 tgattattgt ctttttaaaa atgacaggta tttcctataa ggaatattat gcaggagggt
     2881 cctatctaaa tatgcttatt gtgccttcaa cagtagctct gggtattcct ttgtatcgtt
     2941 ctttccatct aatgaaacat cacattcgaa gtattctttt gggaattttt gttgcctgta
     3001 ttgtcaatac tgtctttact gccctaattg caaaatggtt tgggatggat ttttttctag
     3061 caatctctct ttttccaaaa tcagtcacca ctgctatggc tgttggtatt actgataaaa
     3121 tgcaaggaat agcaactgtt actcttgtag tcgttgttgc aacaggaatt ctgacaagtg
     3181 ttcttggtcc agtcttttta aagctactaa aaattgaaga cccggtagct gttggtcttg
     3241 ctttgggagg aacaggacat gccattggaa cgggtacagc gataaaatat ggacatacgc
     3301 aaggagcgat ggctggcttg gctattggga ttacaggcat catgtatgtg gtgattagtc
     3361 caatagttgc gcagattatc ttacaataaa aaactacgat tggaattcca accgtagttt
     3421 ttttagtcta cataaagttt ggattgatta ttcaaccaac tataaagaag tccgataaag
     3481 agaccgccac ccacgtagtt tcctaatcca gaaaagagga aattgcttag tacacttaat
     3541 agagtcattc cctcaactgg tccaccattt gcaaaaaagg ccagggagaa gagtgaaaag
     3601 ttcgcaatga cgtgctcata tcccaagaaa gcaaagataa agatgatgaa aataacggaa
     3661 atgagacgcc cagcgtcatc tttgatgcgt aagaaggtaa atacaccgat attcacgaca
     3721 atattagcaa aaataccttc aataaattgg gtcaaaggtg tctttgaaag cttggccacc
     3781 gttgcttcaa ataggtagct gtgagcatca acgtgctgat aaggcagagt cagtgagacc
     3841 aagtaacaaa caaggaccgc accgacaaag ttgaaaagga tacaggttgc caacatcctg
     3901 agggctgttt tcgtaggaat cgtttttcga tggctggcta ctgtcatata catcatgttg
     3961 gatgttccaa gttcggcatt catatataaa atcatgagta gcccccaacc aaacatcaac
     4021 ccatagctaa atttcccgag tccttctgcg acatggttga gtttgtctgc tgtataaaga
     4081 gaaatgacaa tccccaatcc taaataaaga ctggctagta tcgatcgtac agcgtaggca
     4141 gaaaaactgt gttcaaacaa atctgctttt ttcttgatac tcttttcaag tgtatacatt
     4201 aatgtctctt ggttagctcc catcctaatc tccttattga atctactact ttttcgagta
     4261 aacgttttct ttttatcgaa tggctttact ttgtttatta tacttgataa aatggttgtt
     4321 gtccaaaaaa aattcaactt ttgaaaggaa atataagaaa aatatggatg ttacatggac
     4381 agtgaaatat atcactgaat ttttagcgac tgcactcctt attatcattg gtaatggtac
     4441 agttgcaaac gttgatttaa aaggcacaaa gggaaacaac tctggttgga ttctcattgc
     4501 gattggctat ggtttggcag ttatgatgcc agcattgatg tttggtaacg tttccggtaa
     4561 ccatatcaac ccagccttca cacttggttt ggctgtttca ggtctcttcc cttgggctca
     4621 cgttgctcaa tacattgttg cccaattgtt aggtgcaatg tttggtcagt tagtggttgt
     4681 agcagtgtat aaaccttact tcttgaaaac tgaaaattct aaccatattc ttggctcatt
     4741 ctcaactatc agtgcgcttg ataacggaac gaaagaaagc cgtaaagctg cgacaactaa
     4801 tggtttcttg aatgagttcg ttggttcatt tgtattgttc ttcggtgccc ttgctttgac
     4861 caaacatttc tttggttcag agttggttgg taaattgatt gaacagggct atgataaaac
     4921 agtcgctgag acaatgactg ctccatatac ttcaggttca attgcagttg ctcacttagg
     4981 cattggtttt ctagttatgg cacttgttgc ggctcttggt ggtccaacag gtcctggtct
     5041 taacccagcg cgtgaccttg gtccacgtat cgtccatgcc cttcttccaa aatctgttct
     5101 tggtgaaaac aaggctgatt caaaatggtg gtatgcttgg gttggtgtat gtgctccaat
     5161 tatcgcatca attgccgctg ttgcactttt caaattcttg tatctataat atagagaacc
     5221 cgtttcgtcg ggtttttctt tttctcttgg tatatcctat ataaagttgt ctgctctgct
     5281 attttcctaa aagttatgct acaataagga tagaaaaatc ggaaaagagg ctagaatatg
     5341 tcagatgtta ttgcttttgg ctatggaagc agtcgagcgg agatgcagct caagcggctc
     5401 aatcgtcatg gaatcatcgc aggtgcgaca ggtacaggga agaccgtgac cttaaaggtc
     5461 ttggcagagc agttgagtga tgcgggaatt cccgtctttc tatcggacat caagggtgat
     5521 ttgaatagtt tggttgcggc caataccaag gagattgatc ctagtcgtct agagaagact
     5581 cattatcttg actatagccc agtcggttat ccagttgagt tgtgggatgt cttgggggaa
     5641 aatgggactc ctatccgcat gactatttca gagctgggac ctgtcctact gacacgtttg
     5701 ttgggcttga atgatactca ggagtccatc ttgaatatcg ttttcagcgt ggcagacgag
     5761 cgtggccttc tcttgattga tttgatggac ctacgggcta tgctcaattt tgtggctgaa
     5821 aatgcggcag agctgagcca atattatgga aatattccag ctcgttcagt tggtgccatc
     5881 ttgcgtagct tggttgtttt ggagcaacaa ggtggtaaga ttttcttcgg tgagccaagc
     5941 cttgatattg ctgatttgat gcgtacggca gaagatggcc gtggggttat caacgttctc
     6001 caagctactc agctattcaa tcaaccaact ctttattcga cagtcctgct tagcctctta
     6061 tcagaactct atgaagtctt gcctgaggtg ggcgatttgg acaagcctaa gatggtcttc
     6121 ttctttgacg aggctcatgt tctcttcaaa gatgctccaa aagttcttct tgaaaagatt
     6181 gaattgattg tccgtttgat tcgttcaaaa ggtgtaggtg tcttctttgt aacgcagaat
     6241 ccgacggata ttcctgatag cgtggcagcc cagttgggca accgcatcca acatggtctt
     6301 cgcgccttta caccaaaaga gcttaagaca gtcgcgacag ttgccgaaac cttccgtcaa
     6361 gaaggtgatg aggatttggc caaggtcatt caggagttgc aggtaggtga agcggttgtg
     6421 tctactctgc aagctgacgg gacaccaagc tttgcggatc gggttttgat ttatccacca
     6481 aagagtatgc tgggaacggt ggagccaagc gccctcttgt cagttatcaa taattctcct
     6541 ttgatggaaa aatatgctga cgcggtcaat cgtgagtcag cccatgagca gattttagcc
     6601 atgacagagg ctaaagaagc cgaactcatt aaaaaagcag agcaggccga agcggaaaaa
     6661 caggcagaaa aagaagctaa ggcagccgca aaaatggaag agaaagccca gaaagaagca
     6721 gctaaagctg cacaaaaaac tagtcagcca gccagtcgca aaacagattc catgatggat
     6781 cgctttacca agaacctgat gagtcaggta ggacgggaag ttgggcgcgt ggtaactcgt
     6841 ggcattatgg gcatgttaaa agggaaataa acgactagac tgagaaggaa acttctcagt
     6901 tttttatcta gacaaagttc ttgccagatg ccacaaaatt cgttaaaata aacgtaaatc
     6961 actagttagt aaggagttac cgtgactgat caattgcagg cattattgaa agactatcag
     7021 ccccagccat taggtgaaaa acgttcttat gcagttttct tgcctctagt atggtcagat
     7081 gatcagtggc aagttctata tgaaattcgg agcgagtcca tttctcagcc aggagaagtt
     7141 tcctttccag gtggcggaat tgatgaaggc gagacagcag aagaagctgc cattcgtgag
     7201 gttatcgaag aacttgacat tcaacagaaa caaattgagt tgctgggaga aattgattat
     7261 ctcgttttcg gtcgctcgac gattcgctgt tttgtcggtc gacttcactt ggactggcag
     7321 acccttcaac ccaatgatga agtggctcga ttctttacag ttccactaga aaccttgctg
     7381 aaaacggccc ctgtctatta tcaactggat tcacagattg ttccagattg tgactttccc
     7441 tttgagcgtt tgagaggtgg ggttgactat cctttcagtc atcacaaacg ctccgttccc
     7501 ttttatgaaa atctaccaga aaatatctgg ggaatgaccg ctcaatttac ccattgtttt
     7561 gtggaaatag tgaagagtaa tctatcgtga aatgataggt tatttttagg aggaaaaacc
     7621 agcctttgcg atatgtatca gcgaaaaaaa tggagataaa gctcaatgtg agtaatgtat
     7681 agaaaaacac aaaaaaaaac agatgcatgg cagataaaag atagctatgg ctggtatact
     7741 tggtacggtc catattttta agtaccatca tctatccagg aatgcgacaa tattcatgta
     7801 aacgcattca gtggcttgtt gtcatttcca tgtagatgag tgggaaaatg tataaatcta
     7861 tattttaaga aggagccaat tatgagcaag cagaaagttg tgtccagttt attattaagc
     7921 acagtcgtat tagggggatt agccttttat tcaacgacaa cggttaaagc agaatcgcta
     7981 gaaccagatg ttacatcagt tagttcaagc gatgctacta ataaactggt agtatcaaat
     8041 gaagaggaaa gcgacttttt agccgaagaa gagcttgaag agagcgatgc tccagtagaa
     8101 actctaaatg aagaaatcaa agatgtcaca gagccatctt cacctgaagc acttctccaa
     8161 cctcgtgcga tgatgagcga ttctatgagt agcggtatgg aagaaattca ggtgaaagac
     8221 gagccttcag ataatacggc agaaaaggta gtgaagcaac agtcggacct aattcaatca
     8281 tcgagcgcgg actcctttaa gaatggaaag gacaaagaga aactcgagtc ttcagtgtct
     8341 atagacttgt tgagttcaga aaacaatgag ataaaatgga aagtaagttt tgacacaagt
     8401 gcatggtctt ttaattatca tcatggaggt ctttatttta ttcttccgga aggtttgaat
     8461 ttaaagagtg ttaaagctaa tactaatgat gaattattta atcgattccc taataaggta
     8521 gatagtacta ataatggtga tggagcacca ttccgtttct ttaataaaga agaaaacagc
     8581 gatagcttta ataatcaatg ggggtggtca gcagggcaag ctcctaatga aatgattaat
     8641 aactggaaaa caggaaatcg tttttctaag atttacttta tagataaaat aacagatact
     8701 agacaggtaa cctatacttt aactgctagt gtgactgatt caaatcaaaa atcattccca
     8761 cttgtagcag tgatgaagag cttttggtat acaaactcgc aaggaacgca gattacttca
     8821 ttagctggtc gtgagattac ccttgagaaa gaaaaacctc taccacctaa agagactcca
     8881 gcgccagaag ctccgtcaac tcctgaaaag caaccggaat ctccaaagga agatcctaag
     8941 aaggaagata ctccggaggt ttcaccaaaa ccagaagcgc caacaccaga cgcaccaaaa
     9001 caggacgttc cagaaactcc ggataagcaa ccagaagaaa tgcctaaagt tcctgaagca
     9061 ccgaaggaag acgctccagc tccagcgcca tcgactccat cagtaccaga agaaaaacca
     9121 aaggaagatt cgaaaccaga agtgccatca gcaccggaag ctccaaagga cgctccatca
     9181 attccggaaa aacaaccaga cgctccacaa gttccattga ctcctgaaga aaaaccacaa
     9241 gtaccggaag caccaaagca agacgatgtc caaccagacg ctccacaagt accggaagca
     9301 ccacaacaag acgacgtcca accagacgct ccacaagtac cggaagcacc gaaggaagaa
     9361 gttccaaccc caccggctcc atcagtacca gaagagcaac caaaagaaac tccaacacca
     9421 gaagttccaa aacaagacga tgttcaaccg gaagcaccaa aatctgataa agtagaaact
     9481 gacaaacaaa tgccagaaac taagcaacca gatatgaagc aaccgaaggc agacgacatg
     9541 cctaaggaac aaaaaccgaa agccgacgag cccaaggtag agcaaccaca aatggaagct
     9601 cctaagaaag attcggaagc accaaaatct gataaagtag aaactgacaa accaatgcca
     9661 gaaactaaac aaccagatat gaagcaaccg aaggcagata aaccagaagc agagaaagct
     9721 caaatgccac ggacagaggg tatgaagcct gaatctaagg cttcaatgat gccaaaagca
     9781 gaggcaccaa aagcaacttt gccaaataca ggcgaagcaa gtagcgcaat aggctggcta
     9841 ggtggtgctt tagccactct tgccacaggc ttgtatctat tcaaaaacaa aaaagaagaa
     9901 tagtcattat tgaataagat atgagaactt ccctcttcta agttcataaa agactccaga
     9961 tcatcgctgt agaagccttg gtttggagtc tttttgttaa atatt
//
LOCUS       DASFQD010000091         9759 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.092, whole genome shotgun sequence.
ACCESSION   DASFQD010000091 DASFQD010000000
VERSION     DASFQD010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 9759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9759
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.092"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            171..359
                     /locus_tag="U1021_001676"
     CDS             171..359
                     /locus_tag="U1021_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3272 domain-containing protein"
                     /protein_id="HEM4712193.1"
                     /translation="MKLPQFLFLAITTILAVYFMNASILTGDFLIAGIYAFIAYRNLH
                     FAYKVTKFIRLVEKQTKK"
     gene            complement(325..1281)
                     /locus_tag="U1021_001677"
     CDS             complement(325..1281)
                     /locus_tag="U1021_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     synthetase/biotin operon repressor"
                     /protein_id="HEM4712194.1"
                     /translation="MKTYQKIYLLLKEKEDYMSGEDLAQELGISRTSVWKAIRQLETH
                     GLTIEAARNRGYKLADGDLLLPELISQELQLPVHLNMDSDSTQLDAKQGIESGHTSPA
                     LYLAPYQNKAKGRFGRPFYASKSGGIYMSLRLSPNVPFLEFKPYTILAAAAVVKAIQS
                     LCDLDVQIKWVNDIYLGHKKVAGILTEAISSMENQRVTDVIIGVGINVRIDDFPKELQ
                     QSAGNLFEEQPPFTRNQLITAIWKAFLETDEKELIALYKEKSLVVGQQVSFVENQVEF
                     KGTAIAVTDTGNLVIQLDNGKAKIISSGEISLTSWSASPPNE"
     gene            1346..2380
                     /locus_tag="U1021_001678"
     CDS             1346..2380
                     /locus_tag="U1021_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HEM4712195.1"
                     /translation="MKTLDYIVTLTNTPSPTGFTTDIMNYIKAEVESFGYAASKTAKG
                     GVLVTVPGENDQEHRMVTAHLDTLGAMVRAVKPDDRLKMDLVGGFGYPSIEGENCLIH
                     CAKNGKTFTGTILMHQTSVHVYRDASTAERNQTNMEIRLDEKVTNADETRALGIEVGD
                     FISFDPRTVVTETGFIKSRHLDDKVSAAILLHLLKVYKEEGITLPYTTHFYFSNNEEI
                     GYGANSSIPAQVVEYLAVDMGAMGDDQQTDEYTVSICVKDGSGPYHYELRQHLVALAE
                     RDGIPYKLDIYPYYGSDASAAMRAGADVKHALLGAGIESSHSYERTHLDSVVATERMV
                     DAYLKSAMVD"
     gene            2382..3119
                     /locus_tag="U1021_001679"
     CDS             2382..3119
                     /locus_tag="U1021_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712196.1"
                     /translation="MNETRFLELFNDLDKVLRKVCGVADGEYADVGSMLTKAKELTRH
                     NPVEANWDKLYVARQLRNLMVHEKRTGLKEVAQPSQELITVLEKVIAQYQEPITIADY
                     LQKTQKIKPVIFEAKDKLIKALEIVEQEHFSKFPIFSDKVYQGLVSDKGLTNWLAKAS
                     KETGSIREKLVEASLEDVLACEEDSIQVIVLPITAHLYQVINHFEGRKRTTILVSRQA
                     SGKLHSPEDLVGIVTAQDLAEIYGMVD"
     gene            3138..3605
                     /locus_tag="U1021_001680"
     CDS             3138..3605
                     /locus_tag="U1021_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000138511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine/deoxycytidylate deaminase family
                     protein"
                     /protein_id="HEM4712197.1"
                     /translation="MSTNRLAWDEYFAAQALLIANRATCKRAKVGAVLVKDNKVIATG
                     YNGSVSGTEHCLDQECLMIDGHCARTLHAEVNAILQGAERGIPKGFTAYVTHFPCLNC
                     SKQLLQVGCKRVVYINEYRMDDYAQYLYKEKGCELVHLPLEVVKQAIADAEFI"
     gene            4003..5193
                     /locus_tag="U1021_001681"
     CDS             4003..5193
                     /locus_tag="U1021_001681"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEM4712198.1"
                     /translation="MSERKLFTSESVSEGHPDKIADQISDAILDAILAEDPDAHVAAE
                     TAVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTKGEYGFSAESVGVHPSLVEQSP
                     DIAQGVNEALETRQDASQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLSHKLVRRL
                     AELRKSGEIAYLRPDAKSQVTVEYDEDNQPVRVDTVVISTQHDPEVSQEQIRQDVIER
                     VIKEIIPAHYLDDQTNYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFS
                     GKDATKVDRSASYAARYIAKNIVAAGLAKKAEVQLAYAIGVAHPVSVRIDTFGTSTVA
                     ESKLEAAVRQIFDLRPAGIIQMLDLKRPIYKQTAAYGHMGRTDIDLPWEKLDKVEALK
                     TAVL"
     gene            5224..5835
                     /locus_tag="U1021_001682"
     CDS             5224..5835
                     /locus_tag="U1021_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEM4712199.1"
                     /translation="MKALIVFAHPRKESFTHALVDRVAEALLENGAEVVIRDLYEIGF
                     DPVLHGEDTIHIEDGKFVRQATVFPADVQVEMDLIAESDLLVYIFPSWWNGMPAIMKG
                     YVDRVFQHGFAYSFESDEPRKLFSTKKAIFFTPTGQPQNADGSLTPIDQAMKTLTSEW
                     LFNSNGAQVIDHIFYGRVPYLTREELELYLVDAREQIQRIFHK"
     gene            5986..7245
                     /locus_tag="U1021_001683"
     CDS             5986..7245
                     /locus_tag="U1021_001683"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001226236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEM4712200.1"
                     /translation="MRKIVINGGKTLKGSVTVSGAKNSVVALIPAIILADGIVTLDGV
                     PAISDVDSLVDIMETMGATVKRDGETLEIDPRGVKDMPMPFGKINSLRASYYFYGSLL
                     GRFGQAVVGLPGGCDLGPRPIDLHLKAFAAMGAETTYEGDYMRLATNGQRIQGAHIFM
                     DVVSVGATINTILAAVKAEGRTVIENAAREPEIIDVATLLNNMGARIRGAGTDIITIE
                     GVDSLKGTRHQVIPDRIEAGTYIALAAAVGEGIRIDNVLYEHLESYIAKLEEMGVRMT
                     ISEDSIFVEKQEKLKAVSVKTSPYPGFATDLQQPITPLLLKAEGTGTIVDTIYEKRVG
                     HVQELANLGAKISTRNNHIAFEGPNQLTGTSVKATDLRAGAAMVIAGLMAQGRTEITN
                     IEFILRGYSNIIDKLTELGADIQLIED"
     gene            7340..7912
                     /locus_tag="U1021_001684"
     CDS             7340..7912
                     /locus_tag="U1021_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4712201.1"
                     /translation="MTLWTRLAKFAYFETDRLYLRPFSFEDGESFYEIVSNPENLPFI
                     FPALEDRNIAFSTMVEKFMRSPLGNWALVDKYSERMIGALCFEKVDERQLSAELSYFL
                     KKDYWRRGLMTEAVRTLVYLAFYEFGLRELVIVTHEENVASQMVAKKAGLVQVAQYRG
                     SDRYSHKTRNYLKFSLKRAEFSLEMYEENQ"
     gene            7909..8769
                     /locus_tag="U1021_001685"
     CDS             7909..8769
                     /locus_tag="U1021_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013903404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl aminopeptidase"
                     /protein_id="HEM4712202.1"
                     /translation="MITIKSQREIDAMNRAGDVLAGIHIGLREIIKPGVDMWEVEEYV
                     RKTCKEKNVLPLQIGVDGELMDYPYATCCGLNDEVAHAFPRHYKLKEGDLLKVDMVLS
                     EPLDKAVVDVSKLNFNDVKAMKKITQTYRGGCADSCWAYAVGQVSEEVQNLMDVTKEC
                     LYRGIEQAVVGNRIGDIGAAIQEYAEGLGYGVVRDLVGHGVGPTFHEEPMVPHYGTKG
                     RGLRLREGMVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVI
                     LTSQGEEGTY"
     gene            8817..9746
                     /locus_tag="U1021_001686"
     CDS             8817..9746
                     /locus_tag="U1021_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEM4712203.1"
                     /translation="MKKTKIVEGLKTFCSTFFSFYRSADSDVTSVAVAYYLLISIFPI
                     LLTLANLLPYYPFDVDMILSVVAEFVPDKLYPSVSSFITSVLTKPSSSWLGISILTTL
                     WTLSRSMTILQKAFNKAYGINEHRDFIIGHLIGIFLGIGLQVIILLSITLLTFGQAVF
                     SYINKLVPIEDAWLKGLLSQTQLVGLLALFAALVMLYFFLPNVRIKKVRYVFPGTLFV
                     LLTMTSIGKLFSIYVDNYANKLLDFRIVTAVVFLVFMLWFIFMAQVLIIGAMINATVQ
                     SMQVEEFHARDGDIVSILNRLKARFTAIDKEWE"
BASE COUNT         2710 a         1727 c         2358 g         2964 t
ORIGIN      
        1 aatagttttg atagatattt tatactattt tcaatcctaa atatttttca tatctcctta
       61 agaaagcacc aattagattg gtgttttctt gtttagaaaa gactcgaaac ctatcaagaa
      121 agcatataaa aattcagcca gttgactgaa tttttggtat aatctatttt atgaaacttc
      181 cacaatttct ttttttagcc attacaacta ttttagctgt ttattttatg aatgcatcga
      241 ttttgacagg agatttcttg attgcaggta tctacgcctt tatcgcctat cggaatcttc
      301 attttgctta caaggtgact aaatttattc gtttggtgga gaagcagacc aagaagtaag
      361 gctgatttct ccgctggaga taatttttgc tttgccgtta tctaactgga taaccaggtt
      421 tcctgtatca gtaacagcga tggctgtacc cttaaattca acttgatttt ctacaaagct
      481 cacttgttgg ccaacgacaa gtgatttttc tttgtaaagg gcaattagtt ccttctcatc
      541 ggtttctaag aaggctttcc agatggcagt aatgagttga ttgcgggtaa atggtggttg
      601 ctcctcgaaa agatttcctg cagattgttg taattcctta gggaaatcgt ctatgcggac
      661 attgatgccg acaccgataa tgacatcggt tacccgttgg ttttccatag aagagatagc
      721 ctcagtgagg atgccagcga cctttttgtg tccgagatag atgtcattga cccacttgat
      781 ttggacgtcc aagtcgcaaa gagattgaat ggccttcaca acagcagctg cagctaaaat
      841 ggtgtagggc ttaaattcta gaaaaggaac attgggagag agacgaagcg acatataaat
      901 gccacctgac ttggatgcat aaaagggtct cccaaatcgt cccttggctt tattctgata
      961 gggagctaga tatagggcag gactagtatg acctgattca ataccttgtt tggcatctag
     1021 ctgggtggag tcgctatcca tattcagatg gacaggtagt tgaagctcct gagagattaa
     1081 ttcgggtagg agtaaatccc catcggccaa tttgtaacca cgattgcggg cagcctcaat
     1141 agttaaacca tgcgtttcta actggcgaat ggctttccaa actgaagtcc gagaaatacc
     1201 caattcctgt gccaaatctt ctccgctcat gtagtcttct ttttctttta atagtaaata
     1261 aatcttctgg taggttttca taccttcatt atagcaaaaa aatgtcctaa aacgtgatat
     1321 aatagtttaa aataaggagg ttttcatgaa gacacttgat tacattgtta cattgaccaa
     1381 cactccgtcg ccaactggtt ttacgacgga tattatgaat tacatcaagg cagaggttga
     1441 aagtttcggc tatgctgcta gtaagaccgc taaaggtggt gttttggtga cagttccggg
     1501 ggaaaatgat caggaacacc gcatggtgac tgctcacctg gacacactgg gggccatggt
     1561 tcgtgcagtg aaaccggatg accgactcaa aatggatttg gtgggaggat ttggataccc
     1621 ttctattgag ggagaaaatt gtttgattca ttgcgctaaa aatggcaaga ctttcacagg
     1681 tactattctc atgcaccaga cctctgtcca tgtctaccga gatgccagca cagccgagcg
     1741 aaaccagacc aatatggaaa ttcgtttgga cgaaaaagtg accaatgcgg acgagacgcg
     1801 ggccttgggt attgaagtcg gagattttat ctcctttgat cctcgtaccg tcgtgacaga
     1861 aactggcttt atcaagagtc gtcacttgga tgataaggta tccgcagcta tcttgcttca
     1921 tctattgaag gtatataaag aagaggggat tactctgcct tatacgacac atttctattt
     1981 ttcaaacaat gaagagattg gctacggtgc caactccagc attcctgctc aggtggttga
     2041 atatttggca gtcgatatgg gggcaatggg agatgaccag cagacggatg agtacacggt
     2101 ttctatctgt gttaaagatg gttcaggtcc atatcattac gaacttcgtc agcacttggt
     2161 agccttggca gagagggatg gtattccata taaattagac atttatccat attatggttc
     2221 cgatgcttcg gcagctatgc gagcaggtgc agatgttaag catgccctat tgggggctgg
     2281 tattgagtct agccattcct atgaacggac gcatttggat tctgtagttg cgactgagcg
     2341 gatggtagat gcctatttga aatcagcaat ggtagattaa gatgaatgaa acccgttttt
     2401 tagagttatt caatgacttg gataaggtct tgcgtaaggt gtgcggtgtt gcggatgggg
     2461 aatacgcaga tgtaggctct atgttgacca aggcaaagga attgacgcga cataatcccg
     2521 ttgaggcgaa ctgggataaa ctctatgtgg ctcgtcagtt gcgtaatctc atggttcatg
     2581 agaaacgaac aggtttgaag gaagtagccc aaccttcgca ggaattaatc actgttttgg
     2641 aaaaagtgat agcccagtac caagaaccga ttaccattgc cgactatttg caaaagaccc
     2701 agaaaattaa gccggttatt tttgaggcca aggacaaatt gataaaggct ttagaaattg
     2761 tggagcaaga gcatttttct aagtttccta ttttttctga caaggtttat caaggtctgg
     2821 tttctgacaa gggattgaca aattggttgg ctaaggcaag caaggaaacg ggctctatac
     2881 gtgaaaaatt ggtggaagct agtcttgaag acgtactagc ttgtgaggaa gatagtattc
     2941 aggtgattgt tctaccaata acagcccatc tttatcaggt aattaatcat tttgaggggc
     3001 gtaagcgcac aaccatccta gtcagtcgtc aggcgagcgg gaagcttcat tcgccagagg
     3061 atcttgttgg tattgtcaca gcccaggact tggcagagat ttatgggatg gtggattgag
     3121 tggagaaagg agaaatcatg tcaacaaatc gtttagcttg ggatgagtat tttgcggctc
     3181 aggcgctttt gattgccaat cgggcgacct gtaagagagc aaaggtcggt gcggttttgg
     3241 ttaaggacaa taaggttatc gcaacaggct acaatggttc tgtttcagga accgaacatt
     3301 gtttggatca ggaatgcctt atgattgatg gtcattgcgc tagaaccttg catgcggaag
     3361 tcaatgccat tttacaagga gcggagcggg gaattccaaa aggttttact gcctatgtga
     3421 cccattttcc ctgtctcaac tgctccaagc aattgttaca ggttggttgt aagcgggttg
     3481 tttatatcaa tgaataccgc atggatgact atgctcagta cttgtataaa gaaaagggct
     3541 gtgagttggt tcatttgcct ctagaggtgg ttaaacaggc aattgcagat gccgaattta
     3601 tctaatgatt ctgtaggaga gtggttgtat agaacaaccc tctttatttt taagaaaatg
     3661 ctaggatagt cggtcaatct atgctatact agaaacgtta ttaagtcccg aaaaggtagt
     3721 ttatagacta gttaatattt gcagaaacac ttgaaacaca attaaagaag ctggtaacat
     3781 tgaatagtaa gcgtaaaaac tttactacac ttcagtcacc attttcttca aataaggctg
     3841 atttcataca gtctggtatt gtctttctcg ttgggtacct ggaaattttc ctttgcttaa
     3901 gacaggtgtc tttcgcaaag aactagtctt cgactagttc tttgtaacct tagtaacccg
     3961 ctaggtttct agcatatatt ctattttaag ggggacattt ttatgtcaga acgtaagttg
     4021 tttacgtctg agtcagtatc ggaaggacat ccggataaga ttgctgacca gatttcagat
     4081 gctattttgg atgctatttt agcagaggat ccagatgcgc acgtagcggc agagacggct
     4141 gtttatacag gtagtgttca tgtgtttgga gagatttcaa ccactgccta tgtggatatt
     4201 aaccgtgtgg tacgtgatac gattgcggag attggctata caaaaggtga gtatggtttt
     4261 tcagctgagt cggttggggt tcatccgtca cttgtagagc aatcgccaga tattgcccaa
     4321 ggcgtcaatg aagccttgga aactcgtcaa gatgctagtc aagatccatt ggatttgatt
     4381 ggtgcaggtg accaggggct catgtttggt tttgcagtag atgaaacgcc tgaacttatg
     4441 ccgttgccaa tttcacttag tcacaaattg gtgcgtcgtt tggccgagtt gagaaaatct
     4501 ggtgaaattg cttatctccg tccagatgct aagtcacagg taacagttga atacgatgaa
     4561 gacaatcaac ctgttcgtgt ggatacagtc gttatttcga cccagcatga tccggaagtt
     4621 agccaggagc aaattcgtca ggatgtcatt gaacgtgtga ttaaggaaat cattccagct
     4681 cattatctgg atgaccaaac caactacttt atcaacccaa ctggtcgctt tgtcattggc
     4741 ggacctcaag gggactctgg tttgacaggc cgtaagatta tcgttgatac ctatggtggt
     4801 tattctcgtc atggcggcgg tgccttctct ggtaaggatg cgaccaaagt ggaccgttct
     4861 gcatcttatg cggcacgcta catcgcaaaa aatatcgtcg cagctggttt ggctaaaaag
     4921 gcggaagttc aattggctta cgctatcggt gttgctcacc cagtttcagt tcgcatcgat
     4981 acctttggta cgagcacagt agcggaaagt aaactagaag cagctgttcg tcagattttc
     5041 gatttgcgcc cagctggtat tattcaaatg ttggatctca aacgtccgat ttacaagcaa
     5101 actgcagcct atggacacat gggacgtacc gatattgatc tcccatggga gaaattggac
     5161 aaggtggaag ccttgaaaac tgcggttttg taatgaaata gttatccatt tagtgagaag
     5221 tttatgaaag cgttaattgt ctttgcacac cctagaaaag aaagctttac acatgctttg
     5281 gttgatagag tggcggaagc tctgctagaa aatggagcag aagttgtcat ccgagattta
     5341 tacgaaatag gattcgatcc cgtgttacat ggagaagata ccattcatat tgaggatggt
     5401 aaatttgtac gtcaggcaac agtttttcca gcagatgttc aagttgaaat ggatttgatt
     5461 gccgaaagcg acttactagt ctatatattt ccgagttggt ggaatggaat gcctgctatt
     5521 atgaaagggt acgtagaccg tgtatttcaa catggctttg cttacagttt tgaatctgat
     5581 gaaccgcgta aattattttc tactaagaaa gctattttct ttacgccaac agggcagcca
     5641 caaaatgcag atggaagtct gacaccgatt gatcaagcga tgaaaaccct gacctcagaa
     5701 tggctcttca atagcaacgg tgctcaagtc attgaccata tcttctatgg gcgagtacct
     5761 tatttaacga gagaagagct ggagttgtat ctcgtggatg caagggagca aattcagaga
     5821 atttttcata aatgatgaag agagattcac taatagtata taaatatgaa ggactgagct
     5881 cattggctcg gtccttttgc atgctatata actagctttt tccaagactt tatgatagaa
     5941 taaaacgtat gcctttttag gcaaattaag aaagtgaatg ttagtatgag aaaaattgta
     6001 attaatggtg gaaaaacact gaaagggtcg gttaccgtta gtggtgcaaa aaactcagtt
     6061 gttgctctta ttccggccat tattcttgca gacgggattg ttactctgga tggagtacct
     6121 gcaatctcgg atgtagatag cttagttgat attatggaaa caatgggcgc gacggtcaag
     6181 cgtgatggtg aaaccttgga gattgaccct cgtggtgtaa aagacatgcc tatgccattt
     6241 ggcaaaatta atagcttgcg tgcatcctac tatttttacg gttccctcct tggtcgcttt
     6301 ggtcaagctg ttgttggctt gccaggtggt tgtgatttgg gaccgcgtcc gattgatttg
     6361 cacttgaaag cattcgcggc aatgggagct gagacaacct atgaaggtga ctatatgcgc
     6421 ttggcaacta atggtcagcg tattcaaggg gcacatatct tcatggatgt tgtcagcgtc
     6481 ggtgcgacaa ttaatactat cttagcagct gtcaaagcag aaggccgtac agttattgaa
     6541 aatgcggcgc gtgaacctga aattattgat gtggcaactt tgcttaataa tatgggggca
     6601 cgtatccgtg gtgcgggtac agatattatc accattgaag gcgtagacag tctaaaagga
     6661 acacgccatc aagtgattcc agaccgtatt gaagcaggga cttatattgc ccttgctgct
     6721 gctgttggtg aaggtattcg tatcgataat gtcctttatg aacacttaga gagttacatc
     6781 gctaagttgg aagaaatggg tgttcgcatg accatttctg aagatagtat ttttgttgaa
     6841 aagcaagaga aattgaaggc ggtaagtgtg aaaacttcac cttatccagg ttttgcgaca
     6901 gacttgcagc aacccattac tcctttattg cttaaggcag aagggactgg tacgattgtt
     6961 gatacgattt atgaaaaacg tgttggtcat gtgcaggagc ttgcaaatct tggagcaaaa
     7021 atctctactc gtaacaacca tattgccttt gaaggtccaa atcaactgac tggtacatct
     7081 gttaaagcta ccgatttgcg tgcgggagcc gcaatggtta tcgctggttt aatggctcaa
     7141 gggcgtacag aaattacaaa cattgagttt attctacgtg gttactcaaa tattattgat
     7201 aagctgacag aattaggtgc agatattcag ttgattgagg attagagagt ctaattgaga
     7261 actactttct caaaacgtaa acgatttaaa aacaaaacaa tctggggctg ggagtaattc
     7321 tcagcccctt gggtacacta tgacactttg gacaagacta gcgaagtttg cttactttga
     7381 aacggaccgt ttgtatttac gaccattttc ttttgaagat ggagaaagtt tctatgaaat
     7441 tgtatcaaat cccgaaaatc ttccttttat ctttccagct ttggaggaca gaaatattgc
     7501 tttttcgaca atggttgaaa aatttatgcg ttcaccattg ggaaactggg ctttagttga
     7561 taagtattcg gagaggatga ttggtgcgct ttgctttgaa aaggtagatg aacgtcaact
     7621 ttctgcggag ctcagctatt tcctaaaaaa agactactgg agaagaggct taatgacgga
     7681 agcagtgagg actttagttt atctagcttt ttatgagttt ggtctgaggg agctggttat
     7741 tgtcacccat gaggaaaatg tggccagtca gatggtggcg aaaaaagctg gtttggtaca
     7801 ggttgcgcag tatcgcggaa gtgaccgcta tagccataaa acaagaaatt atctaaaatt
     7861 tagcttgaag agggctgaat ttagtttaga aatgtatgag gagaatcaat gattaccatt
     7921 aaatcacaac gagaaattga tgcaatgaac cgtgctggag atgttctggc tggtattcat
     7981 attggtttgc gagagattat caagccaggt gtggacatgt gggaagtaga ggaatatgtc
     8041 cgtaaaacgt gtaaggaaaa gaatgttttg ccactccaaa ttggtgttga tggagaattg
     8101 atggattatc cttatgcgac ttgttgtgga ttgaatgacg aggtcgctca tgcttttccg
     8161 cgtcattaca aacttaaaga aggtgattta ctgaaggttg atatggtttt gagcgagcct
     8221 ttggataaag cggtagttga tgtttctaag ctcaacttta atgatgtcaa ggctatgaag
     8281 aaaatcaccc agacttatcg cggtggttgt gcggattcct gctgggctta tgcggttggt
     8341 caggtctctg aggaggttca aaacttgatg gacgtgacta aggaatgttt gtaccgcggt
     8401 atcgagcaag cagttgttgg caatcgtatc ggtgatattg gtgcagccat tcaagaatat
     8461 gcagaaggtc ttggctacgg tgttgttcgt gacttggttg ggcacggcgt tggaccaact
     8521 ttccatgaag agccgatggt tcctcattat ggaactaaag gtcgtggtct tcgcttgcgt
     8581 gaaggtatgg ttttgactat cgagcctatg attaatacag ggacttggga aatcgatacg
     8641 gatatgaaga ctggctgggc tcacaaaaca cttgatggtg gcttgtcttg tcaatacgaa
     8701 caccaatttg tcatcaccaa agatggaccg gttattttga ccagtcaagg tgaagaaggg
     8761 acctattaat tctcggtgtg gtcgtgaata atagatgaat gaggaaggag gagagaatga
     8821 agaaaaccaa aatagtcgaa ggtttgaaaa cattctgctc aaccttcttt tctttttatc
     8881 gttctgctga tagcgatgta acaagtgttg cagtagccta ctatttgtta atttctattt
     8941 tccctattct tctaactctc gcgaatttac tgccatatta tccatttgat gtggatatga
     9001 ttttatcggt tgtagctgaa tttgtgccag acaagctcta tccttcggtt tcatctttta
     9061 tcacttctgt attaacaaag ccgtcgtcat cgtggttagg gatttcaatt ctgacaactc
     9121 tttggaccct gtcacgtagt atgactattt tgcagaaggc ctttaataag gcttatggca
     9181 tcaatgaaca ccgtgatttt attattgggc acttgattgg catattttta ggaattggtc
     9241 tgcaggtaat tatcctctta agtattacgc ttttgacttt cgggcaggca gttttttctt
     9301 atattaataa gctggttcct attgaagacg cctggctgaa gggacttctt agtcaaacac
     9361 agttagtagg tttactggct ctgtttgctg ccttggttat gctttatttc tttttgccaa
     9421 atgttcggat aaaaaaagtt cgatatgttt ttccaggaac gttgtttgtt ctgttgacga
     9481 tgacttctat tggaaagtta ttttcgattt atgttgataa ttatgctaat aagttgctgg
     9541 attttagaat agtaacagct gtcgtctttc ttgtttttat gctttggttc atttttatgg
     9601 ctcaggtact catcattggt gcaatgatta atgctacggt tcaaagtatg caggtagaag
     9661 agtttcatgc tagagatggg gatattgttt ctatcttgaa taggctaaag gcaagattta
     9721 cagcgataga taaagaatgg gagtgagaaa gaactctat
//
LOCUS       DASFQD010000092         9726 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.093, whole genome shotgun sequence.
ACCESSION   DASFQD010000092 DASFQD010000000
VERSION     DASFQD010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 9726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9726
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.093"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            125..427
                     /gene="gatC"
                     /locus_tag="U1021_001687"
     CDS             125..427
                     /gene="gatC"
                     /locus_tag="U1021_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017644687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEM4712204.1"
                     /translation="MKISEAEVRHVAKLSKLEFSDQETAEFATSLSKIVDMVELLNEV
                     DTTGVAVTTTMADRKNVLRADIAQKGESREELFKNVPESQDNFIKVPAILDGGGDA"
     gene            427..1893
                     /gene="gatA"
                     /locus_tag="U1021_001688"
     CDS             427..1893
                     /gene="gatA"
                     /locus_tag="U1021_001688"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014295200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEM4712205.1"
                     /translation="MTFNNKTIDELHDLLVKKEISATELTKATLEDIKSREGAVDAFL
                     TITEDAALAQAAALDEKGIDADNVMAGIPLAVKDNISTKGILTTAASKMLYNYEPIFD
                     ATSVSQAYAKDMIVVGKTNMDEFAMGGSNENSAFKPTKNAWDQTKVPGGSSGGSAVAV
                     AAGQVRLSLGSDTGGSIRQPAAFNGIVGMKPTYGRVSRFGLIAFGSSLDQIGPFSQTV
                     KENAQLLNVISGHDVKDATSTINEIADFTSKIGQDIKGMKIALPKEYMGEGIDPQVKE
                     TILKAAKHLESLGAIIEEVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDA
                     TNLDEIYVKTRSQGFGEEVKRRIMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFEKVFA
                     DYDLILGPTAPTVAFGLDTLNHDPVAMYLADLLTIPVNLAGLPGLSIPAGFVEGLPVG
                     LQLIGPKYSEETIYQVAAAFEATTDYHKQQPVIFGGAN"
     gene            1893..3332
                     /gene="gatB"
                     /locus_tag="U1021_001689"
     CDS             1893..3332
                     /gene="gatB"
                     /locus_tag="U1021_001689"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017770317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEM4712206.1"
                     /translation="MNFETIIGLEVHVELNTNSKIFSPSSAHFGEDPNANTNVIDWSF
                     PGVLPVLNKGVVDAGIKAALALNMDIHKEMHFDRKNYFYPDNPKAYQISQFDEPIGYN
                     GWIEIELEDGSTKKIRIERAHLEEDAGKNTHGTDGYSYVDLNRQGVPLIEIVSEADMR
                     SPEEAYAYLTALKEIIQYTGISDVKMEEGSMRVDANISLRPYGQEKFGTKTELKNLNS
                     FNYVRKGLQHEVERQAKILRSGGQIQQETRRYDESTGETILMRVKEGSADYRYFPEPD
                     LPLYEVDDSWIEEVRAELPVFPKARRAHYVENLGLTAYDAGQLTSTKALSDFFEAAVA
                     AGGDAKQVSNWLQGEVAQFLNAEGKTIEQIALTPENLVEMIALIADGTISSKIAKKVF
                     VHLAKEGGSAKAYVEKAGLVQISDPAVLIPIIHQVFADNEAAVADFKSGKRNADKAFT
                     GFLMKATKGQANPQVAQQLLAQELAKLLD"
     gene            3441..4788
                     /gene="dgt"
                     /locus_tag="U1021_001690"
                     /pseudo
     CDS             3441..4788
                     /gene="dgt"
                     /locus_tag="U1021_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646466.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dNTP triphosphohydrolase"
     gene            complement(4847..5845)
                     /locus_tag="U1021_001691"
     CDS             complement(4847..5845)
                     /locus_tag="U1021_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM4712207.1"
                     /translation="MVTIKDIAKQAHLSSATVSRVLKGDLTLSVSQETRDRIFNLAQD
                     LGYTKHLKKQAPQQKGTIGIVQWYTESEELADLYYYSIRASIEQTASLLGYQIVRSFN
                     DLTNPLLQGLDGIIAVGKFSSGQIAELTNLSSKLIFVDSDTLTEGFSCVTTDFEHSVQ
                     TVIDHFHSQGLTDIGLLVGQEETTDGHQLPTDPRLTAFRTYLGSLGILQEDYIYQGKF
                     STQSGYELMSQAIADLGDQLPTAFFMANDTLAVGALRALQERQIAVPERVQLITFNDT
                     AITRQVYPALSSISVFTEEMGQEAMQLLDRVIASPQPHHPRKIKLGTQLVIRESSY"
     gene            5978..7150
                     /locus_tag="U1021_001692"
     CDS             5978..7150
                     /locus_tag="U1021_001692"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002275277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HEM4712208.1"
                     /translation="MNTEQLKQAFLDVFGQEADATFFSPGRINLIGEHTDYNGGHVFP
                     AAITLGTYGAARKRDDQLLRFYSANFEELGIIEVDLNNLVFDKADNWTNYAKGVLKFL
                     QEAGHSIDTGMEVFVYGNIPNGSGLSSSASLELLIGIIAEELYGLELTRLDLVKIGKQ
                     TENHFIGVNSGIMDQFAIGMGADQRAIYLDTNSLEYELVPLDLGDHVIVIMNTNKRRE
                     LADSKYNERRAECEKAVEELNAVLTIQTLGELDEWTFDQYSYLIKDENRIKRARHAVL
                     ENQRTLQARKALEEGDLATFGRLVNASHVSLEHDYEVTGLELDTLAHTAWEQEGVLGA
                     RMTGAGFGGCGIAIVHKDKVEAFKENVGKTYTEVVGYAPSFYVAEIAGGSRVLSRK"
     gene            7160..8641
                     /gene="galT"
                     /locus_tag="U1021_001693"
     CDS             7160..8641
                     /gene="galT"
                     /locus_tag="U1021_001693"
                     /EC_number="2.7.7.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose--hexose-1-phosphate
                     uridylyltransferase"
                     /protein_id="HEM4712209.1"
                     /translation="MMAGLVDRFVEQVIANSDFEEMDALYLRNRVLALVGDQVLTVQT
                     DLEDLIELKDELLAHGVRTGFVGELLEEQDMVGSCLMDLMTPNPSQVNRDFWQTYQDS
                     PEQAIGDFYELSKRNDYIKMAAIAKNIYYQVSTEYGDLEITINLSKPEKDPKSIAAAT
                     KAEASNYPKCLLCMENEGYQGRINHPARANHRIIRLELGQEKWGFQYSPYAYYNEHAI
                     FLNQEHVPMVISPRTFEQLLDLLDLLPGYFVGSNSDLPISGGSILTHNHYQGGRHSFA
                     MEKAPIERQLVFDGFESVSAGIVKWPMSVIRLSSADKPSLLGLATKILEKWRSYSDDN
                     VQIKAETDGTPHHTITPIARKRGDLYELDLVLRDNQTSEEFPDGIYHPHPDVQHIKKE
                     NIGLIEVMGLAILPPRLKAELAEVEKFLLGQDSQVADYHQPWAESLKTAHPDVTEETV
                     EQVVRESVGQIFARVLEDAGVYKRTPEGQAAFLRFVEFVGLAT"
     gene            8716..9624
                     /locus_tag="U1021_001694"
     CDS             8716..9624
                     /locus_tag="U1021_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEM4712210.1"
                     /translation="MAEKRFGILITLIAGIAWGLSGVSGQYLMSRGVSVDMLTSLRLL
                     VSGFFLVGLAYATAKEQLLIVLKNRKALLGIFVFAMLGLVLNQMAYLQAIYHTNAGTA
                     TVLQYLCPILVLAYTCLKNREKPSGIELISIILAVAGTFLIATHGKLDELAVTPIGLF
                     WGIFSAFTYALYIILPGKLIRQYGSITVIGLGMLMGGFVVTLGLQTWQHRLPIDGGSF
                     LGLLGIVGVGTIFAYTAFLKGVSMVGPVNGSLLASIEPIASVFFAVWLVNEQFYAIDF
                     VGMLFILLAVLLISLKDILVAQKSIG"
BASE COUNT         2723 a         1753 c         2430 g         2820 t
ORIGIN      
        1 tttgcaattt aaagaacgga tttttaggag gaaattggta acatattagg tcatttctac
       61 ctttgtctgg ggctggaaat atggtataat gagaagatag atttccatta ggaggaaagt
      121 aagaatgaag atttctgaag ctgaagtccg tcacgttgcc aagctgtcta agctggaatt
      181 ttcggaccag gaaacagcgg aatttgcgac aagtttgagc aagattgtcg atatggttga
      241 attgctcaat gaagtagata cgacaggtgt tgcggtaacg accactatgg ctgaccgtaa
      301 gaatgtcttg cgggcggata ttgcccaaaa aggtgagagc cgtgaggagc tctttaaaaa
      361 tgtgcctgaa tcacaagata actttatcaa ggtaccagct attctagacg ggggaggaga
      421 tgcctaatga cttttaacaa taaaaccatt gatgaattgc atgacctcct tgtcaagaag
      481 gagatttcgg ctacggagtt aaccaaggca actttggaag acattaagag ccgtgaggga
      541 gcagtggatg ctttcttgac tatcacagaa gatgcggctt tggcgcaggc tgctgccctt
      601 gatgaaaagg gaattgatgc ggacaatgtt atggcgggga ttcctttggc agtcaaggac
      661 aatatctcta ctaaggggat tttgactacg gcagcttcaa aaatgctcta taactacgag
      721 ccgattttcg atgcgacatc agtttcccaa gcctatgcca aggatatgat tgttgttggt
      781 aagaccaaca tggatgagtt tgccatgggt ggttctaatg agaactctgc cttcaaaccg
      841 accaaaaatg cttgggacca gacaaaagtt cctggtggtt cttcaggtgg ttcggcagtt
      901 gcagttgctg ctggtcaggt tcgtttgtca ctggggtctg acacaggtgg ttctatccgc
      961 cagcctgcag cctttaatgg tatcgttggg atgaaaccga cttatggaag ggtgtcacgt
     1021 ttcggtttga ttgcctttgg ctcatctctt gaccagattg gtccattttc acagacggtt
     1081 aaggaaaatg cccagttgct caatgttatc tctggtcatg atgtcaagga tgcaacatca
     1141 actatcaatg aaattgcaga ctttactagc aagattggtc aagacattaa aggcatgaaa
     1201 attgctttgc cgaaagaata catgggcgaa gggattgatc cgcaggtcaa ggaaactatt
     1261 ctcaaggcgg ctaagcactt ggaaagcttg ggggcaatca ttgaagaagt tagtctgcca
     1321 cattctaagt atggggttgc tgtttactac atcatcgctt catcagaagc gtcttctaac
     1381 ttgcagcgtt ttgacggtat ccgctatggt ttccgtgcag aagatgcgac aaacttggat
     1441 gagatttacg tgaaaacccg tagccaaggt tttggtgagg aagtcaaacg tcgtattatg
     1501 ttagggacat ttagcttatc atcaggttac tacgatgcct acttcaagaa ggctggtcag
     1561 gtgcggacct tgattatcca agattttgaa aaagtctttg cggactatga tttgattttg
     1621 gggccaactg ctccgaccgt tgcctttggt ttggacacgc tcaaccatga ccctgtggct
     1681 atgtacttgg cggacttgtt aacaattcct gtaaacttgg caggtcttcc tggtctttct
     1741 attcctgctg gttttgtaga aggcttgcca gttggtttgc agttgattgg tccaaaatat
     1801 tcagaagaga ccatttacca agtggctgct gcctttgaag cgacaacaga ttaccacaag
     1861 caacaaccag tgatttttgg aggtgctaac taatgaactt tgaaacgatt attggtctag
     1921 aagtccatgt ggagttgaat accaactcga aaattttctc accttcatct gctcattttg
     1981 gtgaggatcc aaatgctaat accaacgtga ttgactggtc cttcccaggc gtccttccag
     2041 ttcttaacaa gggtgttgtg gatgctggta tcaaggctgc cttggccttg aacatggata
     2101 ttcacaagga aatgcacttt gaccgtaaga actatttcta tcctgataac cctaaagcct
     2161 atcagatttc ccagtttgac gagccgattg gctacaatgg ttggattgag attgagctag
     2221 aagatggttc aaccaagaaa atccgtatcg agcgtgccca cttggaagag gatgctggta
     2281 agaataccca cgggacagac ggctattctt atgtagacct caaccgtcaa ggagtgccac
     2341 tgattgagat tgtatcagaa gccgatatgc gttcgcctga agaggcctat gcctatttga
     2401 cagccctcaa ggaaattatc caatacactg gcatttcaga tgtcaagatg gaagaggggt
     2461 ctatgcgcgt ggatgccaac atctctcttc gtccctatgg tcaagaaaaa tttggtacca
     2521 agactgagtt gaaaaacctc aactccttca attatgtgcg caagggcttg cagcatgaag
     2581 tagaacgtca ggccaaaatc ttgcgttctg gtggtcaaat ccagcaggaa actcgtcgtt
     2641 acgatgaatc tactggtgaa accattctca tgcgtgtcaa ggagggttca gctgactacc
     2701 gttatttccc tgagccagac ctgccactct atgaggttga tgatagctgg attgaggaag
     2761 ttcgtgcaga attgccagtc tttccaaagg ctcgccgtgc tcactatgtg gagaacttgg
     2821 gcttgactgc ctatgatgct ggtcagttga cgtctaccaa ggccttgtct gacttctttg
     2881 aagcagcagt ggcagcaggt ggcgatgcca aacaagtttc taactggttg cagggtgagg
     2941 tggctcagtt cctcaatgct gaaggtaaga ctattgagca aatcgctttg acaccagaaa
     3001 acttggttga gatgattgcc ttgattgcgg atggaaccat ttcatctaaa attgctaaga
     3061 aagtctttgt tcacttggct aaggaaggtg gttctgctaa ggcttatgtt gagaaggctg
     3121 gtttggtaca gatttcagac ccagcagtcc tcattccgat tatccaccaa gtctttgcgg
     3181 ataatgaagc agccgtagct gacttcaagt ctggcaaacg caatgcagac aaggccttta
     3241 caggcttctt gatgaaagcg actaagggac aagccaatcc ccaagttgct caacaactct
     3301 tggctcagga attggctaag ttgttggatt agttttaaaa ctatagaata caaaaatcac
     3361 tcaaaaagag tggttttttg ttgactaaaa taataattat tatcatcatg atatagaggt
     3421 atgaggggga ataaaaagat atgtcaaaag acttcgatga ttttttacga gaacatgagg
     3481 agaatgtcaa taagttaaag aaacgtgata aagaaactga gtcggataag gaaagagcaa
     3541 gagatgaatt ttctagagat tattccaggg taatctattc taattccttt agacggcaac
     3601 aagggaaaat gcaactgttt gccgttaatg gtagagcttt tcacaggaac aggctgacac
     3661 atagttttga agtggcacag attgtaaggg ggattgttga ttatttgaaa aaaatacatc
     3721 taataatatt gatatagatt tcaattcgat gtctgtcgtt gttgaaactg gtgcacttgt
     3781 acacgacatt ggcaatcccc catttggtca tcatggagaa agaattttaa atgatttggc
     3841 aaaggatatt ggttttgaag gaaatgccca agggttacgg gtattaaaaa atattgaaaa
     3901 aaagtctcca aatcataaag gcttaaactt aacatataga accctagctt caattctaaa
     3961 atattatgtt ccatatagaa aatcacgaaa gactgagaag ttcatataca aagaagatta
     4021 tgaggaattt aaaaagagat ttaaagaaat ggatgtgttt gtgagaacaa ttgatgttca
     4081 aattgttgat ttggcagatg aaattgctta ttgtgcacat gacttggaag atgcattggc
     4141 gagtaactac ttcaccattg atcaatttgt atttttgttg gaacagaaat tgggagaaga
     4201 tcaaacatta gaggatttta aggaatggat tgaagaggca aaaaataagg caaaaagaag
     4261 taaatccaat gatgattatg atttttattt tagacgagaa ttgctttcta ttattgtgaa
     4321 caaattcatt gaggacatag aagttgtaaa acttaagaaa agtgataagg aaaaattagg
     4381 gaatgatcaa gacaaagaac tagggctcgg tcattataaa aacttgctgg tgcattgaag
     4441 aaaacgattt tcgaaggcgt aacaaattct gacgatatta ttttatatga aaatgttggg
     4501 acgaaagtgt tgactagttt atttgattta ttcatgaacg aagaatataa tcggaagagt
     4561 tttttgatgc cgatcgaata tcgatttgaa aaagacgata cccaaagtga taagaaaaga
     4621 aaagtactag attatatttc tgccatgatg gacacttacg caattgagat gtatataaaa
     4681 cattttggta cagatccgtt cttagagaaa tatgatgcag ctatattcaa gaaaggaact
     4741 ggtaaaaagc taatagagtg tttagcacaa aatttcttac ataaatagcc atatgtttaa
     4801 gaaaaccgag agttcgtgct gaattctcgg gttttcttat gcacttttag taagaactct
     4861 cccgtataac tagctgggta cctagtttaa tcttacgggg atggtggggc tgcggactag
     4921 caatcacacg gtctagcagc tgcatggctt cttgccccat ttcctcggtg aagacactta
     4981 tagaagacag ggctgggtag acctggcgcg tgatggctgt atcgttaaag gtgatgagtt
     5041 gaactctttc tggcactgcg atttgacgct cttgaagtgc tcgaagggcg ccgacagcca
     5101 gggtatcatt agccatgaaa aaggcagtgg gtagctggtc gcctaggtct gcaatagcct
     5161 gactcatcag ctcataaccc gactgggtgg agaattttcc ttggtatatg tagtcttctt
     5221 ggagaatacc caaggagcct agataggtcc gaaaggcagt caggcgggga tctgttggca
     5281 gttggtggcc gtctgtggtt tcttcctgtc caaccaatag gccaatgtct gtcaaacctt
     5341 gcgaatggaa gtggtcaata actgtctgaa cagagtgttc aaagtcagtc gtgacgcagg
     5401 agaatccctc ggtcagtgta tcagaatcca caaagattag cttggaagac aagttggtca
     5461 gctctgctat ttgcccagaa gaaaatttgc caactgcgat gatgccgtcc aatccttgga
     5521 ggaggggatt ggtcaagtcg ttgaaggagc ggacgatttg gtagcccaag aggctggcgg
     5581 tttgctcgat gctagctcgg atagagtagt agtagaggtc agccagctct tcactctccg
     5641 tataccattg gacaatgccg atggtgcctt tttgttgagg agcttgtttt ttgaggtgtt
     5701 tggtgtagcc caggtcctgt gccaagttga aaatgcggtc gcgggtttct tggctgacgg
     5761 atagggtcag gtctcccttg agaacgcggg aaacggtggc agaggaaagg tgggcttgtt
     5821 ttgctatgtc tttgattgta accatgttct tctcctgttt atttgtctct agtatagcat
     5881 aaaagataaa attagtaaaa atttagtaaa aatattgact tttaaattgt tgagttgtac
     5941 aataaaagaa aacgattaca aaatctagga ggttcttatg aacacagaac aactcaagca
     6001 ggcctttctc gatgtgtttg gtcaagaggc agatgcgact ttcttctcac caggtcggat
     6061 taatttgatt ggtgagcaca cggactacaa tggtggtcat gttttccctg cggctattac
     6121 cttggggacc tacggggctg ctcgcaaacg tgacgaccag cttttgcgtt tttattctgc
     6181 taactttgaa gaacttggaa ttatcgaagt ggatttgaac aatctggtct ttgataaggc
     6241 agataactgg accaactatg ccaagggtgt tctcaaattc ttgcaagaag cagggcacag
     6301 cattgataca ggtatggaag tctttgttta cggtaacatt ccaaatggtt caggtttgtc
     6361 atcatcagct tccttggaac tcttgattgg catcatcgca gaagagttgt atggacttga
     6421 attgacgcgt cttgatttgg tgaaaattgg gaaacaaacg gaaaatcact ttatcggtgt
     6481 caattctggc atcatggacc agtttgcgat cggtatggga gcggaccaac gtgccattta
     6541 tttggatacc aatagcttgg agtatgaatt ggtgccccta gatttgggtg accatgtgat
     6601 tgtcatcatg aacaccaaca aacgtcgtga attggcagac tctaagtata atgagcgtcg
     6661 tgcggaatgt gaaaaagctg tggaagaatt gaatgcagtc ttgactattc aaactctagg
     6721 agaattggat gagtggacct ttgatcaata tagttatttg attaaagatg agaaccgtat
     6781 caagcgtgct cgccatgctg tcttggaaaa ccaacggacc ttgcaagctc gtaaggcctt
     6841 ggaagaagga gatttggcta cctttggtcg tctggtcaat gcttcccatg tttctttgga
     6901 gcatgattat gaagtgacag gtctagaatt ggataccttg gctcacacag cttgggagca
     6961 agaaggagtt cttggtgctc ggatgacagg agctggcttc ggtggctgtg gtattgctat
     7021 tgtccacaag gataaggtgg aagcattcaa agaaaatgtc ggcaagacct atacagaggt
     7081 cgtgggctat gcaccaagct tctatgtagc ggagattgct ggaggctctc gcgttttatc
     7141 tcgaaaatag attggagaaa tgatggctgg attggtggat cgttttgttg agcaggtcat
     7201 tgccaacagt gattttgaag aaatggatgc tctttacctg cgcaatcggg tcttggcttt
     7261 ggtgggagac caggttctga ctgttcaaac agatttagag gacttgattg aattaaaaga
     7321 tgaattattg gctcatggag ttcgaactgg ttttgtgggt gaattgctgg aagagcagga
     7381 catggttggg tcttgtttga tggatttgat gacaccgaat ccgagtcagg tcaatcgtga
     7441 tttttggcag acctatcagg acagtccaga gcaagcgatt ggtgacttct atgaattgag
     7501 caagcgcaat gactatatca agatggctgc gattgcgaaa aatatctatt atcaagtttc
     7561 gacagagtat ggggatttgg aaatcacaat caatctgtct aaacctgaga aggatcccaa
     7621 gtctattgca gctgctacga aagctgaagc aagcaattat cccaaatgcc tactctgtat
     7681 ggaaaatgag ggctatcagg gtcggattaa ccatccagca cgcgccaacc accgcattat
     7741 tcgcttggag cttggacagg aaaagtgggg cttccagtat tcgccctatg cttactacaa
     7801 tgaacatgct attttcctaa atcaggaaca tgtgccgatg gtcattagtc cgcgaacatt
     7861 tgagcagctc ttggacttgt tggatttgtt gccaggctat tttgtcggtt ccaactctga
     7921 tttacctatc tcgggtggct ccatcttgac ccacaatcac tatcagggtg ggcggcacag
     7981 ttttgccatg gaaaaggcgc cgattgagcg ccagctggtc ttcgacggct ttgagtccgt
     8041 ttcggcagga attgtcaaat ggcctatgtc ggtgattcgc ttgagttcgg cagataagcc
     8101 atcgcttctt ggtttagcga ctaagatttt ggaaaaatgg cggagctact cagatgataa
     8161 cgttcagata aaggctgaga cggatggaac tcctcatcat accatcaccc cgattgctcg
     8221 gaaacgagga gatttgtacg agctggattt ggttctccgc gacaatcaga cctcagaaga
     8281 gtttccagat ggcatctacc atccacatcc agatgtgcaa catataaaga aagaaaacat
     8341 cggcttgatt gaggtaatgg gcttggcgat tttacctcca cgcttgaagg ccgaattggc
     8401 tgaagtagaa aaattcttac tgggtcaaga tagtcaggtg gctgactatc atcagccttg
     8461 ggcggaaagc ctgaaaacag ctcacccaga tgtgacagag gaaactgtcg aacaagttgt
     8521 tcgtgagtca gtgggacaaa tttttgcgcg tgtattggaa gatgcagggg tctacaaacg
     8581 aacaccagaa ggacaggcag cctttctacg attcgtagaa tttgtaggtt tagcaacata
     8641 attgcaagaa agagtgggac ggtgtcctgc tcttttggta taatgaaagt attcatagtg
     8701 tgagaaggag atataatggc ggaaaagaga tttgggatac tgattacatt aatagcaggt
     8761 atagcctggg gcttgtctgg agtgagtgga cagtacttga tgtcacgtgg tgtttcagtg
     8821 gatatgctta cctccctgcg tttgttggta tcgggattct ttctcgttgg cctggcttat
     8881 gctacagcga aagaacagct gttgatagtg ttgaaaaata gaaaagcctt gttgggaatt
     8941 tttgtttttg cgatgttggg tctggttctt aaccagatgg cttatttaca agccatctat
     9001 cataccaatg ctggaacggc tacggtttta caataccttt gccctatctt agtcttggct
     9061 tatacctgtt tgaaaaatag ggaaaaacca tcagggattg agttgatttc aattatctta
     9121 gccgtagcag gaactttttt gattgcgact catggaaaat tagatgaatt ggcagtgact
     9181 ccaatcggtt tgttctgggg aatcttttca gcctttactt atgcgctata tattattttg
     9241 ccaggtaaat tgatccgtca atacggcagt ataacagtga ttggtttagg gatgttaatg
     9301 ggtggttttg tagtcacgct tggtttgcaa acttggcagc atcgtcttcc tattgatggt
     9361 ggaagtttcc tgggcctgtt aggtattgtc ggagtcggga cgatttttgc ctatactgcc
     9421 tttcttaaag gcgtcagtat ggttggtcct gtcaatggca gtcttttggc ctcgattgag
     9481 ccgattgcat ctgtcttttt tgcagtatgg ttggtcaatg aacaatttta tgcaattgat
     9541 tttgttggaa tgttgtttat tttacttgct gttttgctta tttctttaaa agatatattg
     9601 gttgcccaaa agagtattgg ttaatatact ctttttctac catttgtcaa gtccatcaag
     9661 gtatttgacg aaaaatattt tgagttcaat agtcaaaata aggaaattgt tttattttgg
     9721 actaca
//
LOCUS       DASFQD010000093         9522 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.094, whole genome shotgun sequence.
ACCESSION   DASFQD010000093 DASFQD010000000
VERSION     DASFQD010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 9522)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9522)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9522
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.094"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            105..305
                     /locus_tag="U1021_001695"
     CDS             105..305
                     /locus_tag="U1021_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEM4712211.1"
                     /translation="MSLGALALGLACLGVSIGEGLLVASYLSSTARQPEMQSKLMAGV
                     FLGVAFIEGTFFVTLAMTFVLK"
     gene            342..1058
                     /gene="atpB"
                     /locus_tag="U1021_001696"
     CDS             342..1058
                     /gene="atpB"
                     /locus_tag="U1021_001696"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEM4712212.1"
                     /translation="MEEHLSPTLTLGPVTFDLTMVLVSVITISIIFLLVFWASRRMEL
                     KPKGKQNVLEYVYELTINFTKGNLGDAEAKRYSLFFFTVFTFLLVANNLGLMTKLETA
                     EGHNLWTSPTANMAYDFGLATIATVFCHVEGIRRRGFKAYLKSFVTPWAMAPMNILEE
                     VTNLVSLALRLYGNIYAGEVLVSLLLQLSQQSALAYPIAFALNVVWTAFSVFISCLQG
                     YVFIMLVSMYLNKKISSESE"
     gene            1076..1582
                     /gene="atpF"
                     /locus_tag="U1021_001697"
     CDS             1076..1582
                     /gene="atpF"
                     /locus_tag="U1021_001697"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEM4712213.1"
                     /translation="MATTITMQSSTILGNFILVTVSFAVLIILIRVFAWDKITGIFEE
                     RANKIANDIDAAEEKLTAAANLVQQREDELVQGRIESQKIIQDAVERAKLEKKRILEQ
                     ADVEIQGLKQKAQLEIEAEKREAQENLRVQVAELAVDLASKIILEDLDQQAHSNLIDR
                     YLDKLGDK"
     gene            1583..2116
                     /locus_tag="U1021_001698"
     CDS             1583..2116
                     /locus_tag="U1021_001698"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEM4712214.1"
                     /translation="MNARENAIVQKYALSFVEKVSDHADIWDMYDQISDLISIIHDSK
                     LNRILLSATVSREEKADFVRTVRQSSFWQINDLIEDVIRDGHADLLLETLERVQLQIS
                     KFKNEFEARVVSVYPLTEPQKERLRHLVEQRFSLRVRNITEELDQSLLGGFIVTVNHK
                     VIDASVRTQLKDIRKKL"
     gene            2120..3640
                     /locus_tag="U1021_001699"
     CDS             2120..3640
                     /locus_tag="U1021_001699"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011889023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEM4712215.1"
                     /translation="MESGVLLINAQEISALLKQQIEGFQPDFDYTETGVVTYIGDGIA
                     RAQGLDNAMSGELLVFENGTIGMAQNLETNDVGIIILGQFTDIREGSVVRRTGKIMEV
                     PVGSALIGRVINPLGQPVDGLGEIRTSKTRPIEYPAPGVMQRKSVNEPLQTGLKAIDA
                     LVPIGRGQRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLR
                     QYGALDYTIVVTASASQPSPLLFLAPYAGVAMAEEFMYEGKHVLIVYDDLSKQAVAYR
                     ELSLLLRRPPGREAYPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAY
                     IATNVISITDGQIFLKDDLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLA
                     SYRELEAFTQFGSDLDAATQAKLNRGRRTVEVLKQPLHKPLPVEKQVLILYALTNGFL
                     DSVPIDDILAFEEELYAYFDLHYDGLLDVIRTTKDLPDTDELNAAIQAFKDQSVFK"
     gene            3652..4530
                     /locus_tag="U1021_001700"
     CDS             3652..4530
                     /locus_tag="U1021_001700"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000301235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEM4712216.1"
                     /translation="MAGSLNEIKSKIASTKKTSQITGAMQMVSASKLAKSEQLAQSFQ
                     IYASKVRQITTDLLRGELMASDTSNPMLIRRPVQKSGYIVITSDSGLKGSYNSSILKA
                     VMGMIEQDHDSKDEYEIIAIGSMGADFFRARGINPVFELRGLADNPSFEEVQKIISKS
                     VEMYKNELFDELYVCYNHHVNSLTSQVRVQQMLPVEDLDHNEADGYTATFELEPNREV
                     ILEQLLTQYAESTIYGAILDAKTAENAAGMTAMQTATDNAKNVINDLTIQYNRARQAA
                     ITQEITEIVAGASALE"
     gene            4550..5956
                     /gene="atpD"
                     /locus_tag="U1021_001701"
     CDS             4550..5956
                     /gene="atpD"
                     /locus_tag="U1021_001701"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016398931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEM4712217.1"
                     /translation="MSSGKITQVVGPVVDVAFAAEDKLPEINNALVVYKNDDSKQKVV
                     LEVALELGDGVVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDL
                     EESFPADFEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVG
                     KTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEP
                     PGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQP
                     TLATEMGQLQERITSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQ
                     LGIYPAVDPLASSSRALAPQIVGEEHYAVAMEVKRVLQRYQELQDIIAILGMDELSDE
                     EKTLVGRARRIQFFLSQNFNVAEQFTGMPGSYVPVAETVKGFKEILDGKHDHLPEDAF
                     RNVGSIEDVVAKAAKMKF"
     gene            5966..6382
                     /locus_tag="U1021_001702"
     CDS             5966..6382
                     /locus_tag="U1021_001702"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEM4712218.1"
                     /translation="MGQMTVQIVTPDGIKYDHHAAFVLVKTVDGEMGVYSGHEELIAV
                     LEIGEMKVRRVDDENHVDWIAVNGGIIEVNKDIITVISDSAERERDIDISRAERAKLR
                     AERELEEAQTARNIDMEMRATVALQRAINRIRVGKH"
     gene            6442..6666
                     /locus_tag="U1021_001703"
     CDS             6442..6666
                     /locus_tag="U1021_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1146 domain-containing protein"
                     /protein_id="HEM4712219.1"
                     /translation="MVISILQFFSHILFIYLAHHLLVTTVDWSRWLKVTGDNQRKINL
                     LILFLAIALGYLVSTFFLELLMMGRSFANM"
     gene            6691..7974
                     /gene="murA"
                     /locus_tag="U1021_001704"
                     /pseudo
     CDS             6691..7974
                     /gene="murA"
                     /locus_tag="U1021_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637806.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
     gene            7967..8158
                     /locus_tag="U1021_001705"
     CDS             7967..8158
                     /locus_tag="U1021_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEM4712220.1"
                     /translation="MDKDNLSYVGKNLILVAVVLLIAILVFILGLMVGYGVIGDGDNV
                     FAVLSPAKWQELIGKFTGK"
     gene            8188..9027
                     /locus_tag="U1021_001706"
     CDS             8188..9027
                     /locus_tag="U1021_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HEM4712221.1"
                     /translation="MAKKNVKKQAMSLLSLLATIVVVAGGYLLSDNKSSNVADYSYYV
                     NQSKASEGTPSQELASSVLTEDVKKQLGNSIEWNGAGAFIINGNQTDLDASVASVPYG
                     DNKTKTVQGETVPTVANALLAKSTRQYKDREEIGNGRTSWTPAGWHQIHDLTGEYDHA
                     VDRGHLLGYALIGGLSGFDASTSNPKNIAVQTAWSNQANDQTSTGQNYFESQIRRALD
                     KNKRVRYRVTLVYAESEDLVPVGSHLEAKAADGSLEFNVFIPNVQSGLSINYHSGEIA
                     VNQ"
     gene            9214..>9522
                     /locus_tag="U1021_001707"
     CDS             9214..>9522
                     /locus_tag="U1021_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM4712222.1"
                     /translation="MEKHVEQRVEDVTYNKAKLWQIILFAMNNSSTNIYLVAFTFVTY
                     LSTGVLGLAALFVSQLMGYIRIFDGFIDPTIGVIIDKTDTKFGKYRPILVLGNIITAA
                     S"
BASE COUNT         2727 a         1696 c         2267 g         2832 t
ORIGIN      
        1 ttacaaaaaa cgaattaaac gcttacaatg gcggtatttt cttgacaaat agatgtttta
       61 ggagtatcct tacatggtat taaattttaa aaggagaatt cgttatgagt ttaggcgcat
      121 tggcccttgg attggcctgt cttggtgtaa gtatcggtga gggactgttg gtggcttcat
      181 accttagttc gactgcacgt caaccagaaa tgcaaagtaa attgatggct ggtgtatttt
      241 tgggtgttgc ctttatcgag ggaactttct tcgtaaccct ggctatgaca tttgtcttga
      301 aatagtagaa aatagagaaa tagaaaaggg gggaacctcc attggaagaa catttaagtc
      361 caacccttac ccttggtccc gtaacctttg acctgaccat ggtattggtt tctgtcatta
      421 ccatttccat tattttctta cttgtttttt gggctagtcg tcggatggag ctcaagccta
      481 aaggaaaaca gaatgttttg gagtacgttt acgaattgac catcaatttt acaaaaggga
      541 atcttggcga tgcggaagca aagcggtatt ccttgttctt ctttacagtc tttacttttc
      601 ttttggttgc caataatcta ggtttgatga ccaaattgga aacagcagaa ggacataatt
      661 tgtggacttc tccaacggcc aatatggctt acgatttcgg tttggcaaca attgcaacag
      721 tattttgtca tgttgagggt attcgtcgtc gcggtttcaa ggcatacctc aaatcttttg
      781 tgacaccctg ggctatggct ccaatgaaca ttttggaaga agtgaccaac cttgtgtcgc
      841 ttgctcttcg tctgtacggt aacatttatg ctggtgaagt gcttgtctct cttcttctac
      901 aattatctca acaaagtgca cttgcatatc caattgcctt tgctctgaac gttgtttgga
      961 cagcattttc tgtattcatt tcatgcttgc agggatatgt atttatcatg ttggtatcta
     1021 tgtacttaaa taaaaaaatc agtagtgaga gtgaatagga aagggaaaga caactatggc
     1081 aacaactatt acaatgcaat ctagtaccat tcttggaaac tttatcttgg taacagtatc
     1141 atttgcagta cttattattc ttattcgtgt ttttgcatgg gataaaatta caggtatttt
     1201 tgaagaacgt gccaataaga ttgcgaacga tattgatgct gcagaagaaa aattaacagc
     1261 agcagcaaac cttgttcaac aacgtgaaga tgagttggta cagggacgta ttgaaagtca
     1321 aaagattatt caagacgcgg ttgaacgcgc aaaactagag aaaaaacgta ttcttgagca
     1381 agcagatgtt gaaattcaag gattgaagca aaaagctcaa ttggaaattg aagctgaaaa
     1441 acgtgaagca caagaaaact tgcgtgttca agttgctgaa ttggcagttg atcttgcaag
     1501 caaaattatt ttggaagatt tggaccaaca agctcatagt aacttgattg accgttattt
     1561 ggacaaacta ggagacaagt agatgaacgc tagagaaaat gccatcgtgc aaaaatatgc
     1621 tctatcattt gttgaaaaag tcagtgatca tgcagatatt tgggatatgt atgaccagat
     1681 ttctgacttg atttccatca ttcatgatag taagctgaat cgaatcttgc tgtcagcgac
     1741 agtatcgaga gaagaaaagg ctgactttgt aaggacggta cgtcaatcta gtttctggca
     1801 aatcaatgac ttgattgaag atgttattcg tgatggtcat gcagacttgc ttcttgaaac
     1861 ccttgagcgt gtccaattac aaatcagtaa atttaaaaat gaatttgaag cccgtgtggt
     1921 ttcagtctat ccgttgacag aacctcaaaa agagcgtctc cgtcacttgg tagaacaacg
     1981 attttccttg cgtgtacgca atatcacgga agaacttgat caaagtctcc tcggtggttt
     2041 tattgtaacg gttaaccata aggtaatcga tgcaagcgtt cggacacagt tgaaggacat
     2101 tagaaaaaaa ctttaaaaaa tagaaagtgg tgttcttttg attaatgcac aagaaattag
     2161 cgctttacta aaacaacaaa ttgaaggctt tcagcctgac tttgactaca cagagactgg
     2221 tgtcgtaacc tatatcggtg acggtatcgc ccgtgcgcaa ggtcttgaca atgccatgag
     2281 tggagagctt ttggtatttg aaaatggcac cattggtatg gcacaaaact tagaaaccaa
     2341 cgatgttggt atcatcattc tcggacaatt taccgatatt cgtgaaggtt cagttgttcg
     2401 tcgtactggt aaaattatgg aagtaccagt tggttcggct ttgattggtc gtgtcatcaa
     2461 cccacttggt caacctgtgg atggtcttgg tgaaattcgt actagtaaga ctcgtccgat
     2521 tgaatatcca gcaccaggtg ttatgcaacg taagtcggtt aatgaaccgc ttcaaactgg
     2581 tcttaaggct attgacgctt tggttccgat tggtcgtggt cagcgtgaat tgattatcgg
     2641 tgaccgtcag acagggaaga catctgtagc tattgatgct attctcaacc aaaaaggcca
     2701 agacatgatt tgtatatatg tggctatcgg tcagaaagag tcaactgttc gtactcaggt
     2761 tgaaaccctt cgtcaatatg gtgctttgga ttacacaatc gtagtaactg catctgcttc
     2821 acaaccgtct ccattgcttt tcttggctcc ttatgctggt gttgcgatgg cagaagagtt
     2881 catgtatgaa ggcaaacacg tcttgattgt ttacgatgat ttgtcaaaac aagcggtagc
     2941 ttaccgtgaa ttatctctct tgcttcgtcg tcctccgggt cgtgaagcct atccagggga
     3001 tgtattctac ttgcacagtc gtttgctaga gcgttcagca aaggtttcag atgaattggg
     3061 cggtggctcc attacagctc taccatttat cgaaacacaa gcgggagata tttcagctta
     3121 catcgcgacc aacgtgattt ctatcacgga tggacaaatc ttcttgaagg acgatttgtt
     3181 caactcaggt atccgtccag ccattgatgc gggttcttct gtatcacgtg taggtggctc
     3241 tgcacagatt aaggccatga aaaaggttgc aggtaccctt cgtatcgact tagcttctta
     3301 tcgtgaatta gaagccttta ctcaatttgg ttcggatttg gatgcagcaa ctcaggccaa
     3361 actcaaccgt ggtcgtcgga ctgtggaagt attgaaacaa ccattgcata agccacttcc
     3421 agttgaaaaa caggttttga ttttgtatgc tttgacaaat ggcttcttgg attcagtgcc
     3481 aattgatgat attttggcat ttgaagaaga actgtacgca tattttgatt tgcactacga
     3541 tggtcttttg gatgttattc gtacaacaaa agatcttcct gatacagatg aattgaatgc
     3601 tgctatccag gctttcaaag accagtctgt ctttaagtaa aggagtgaat aatggcaggt
     3661 tctctcaatg aaatcaagtc aaaaattgca tcaactaaga aaaccagtca aatcaccggt
     3721 gccatgcaga tggtttcggc ttctaaatta gccaaatcag agcaattagc gcaatccttt
     3781 caaatctacg ctagcaaggt tcgtcagatt acaacggacc tcttgcgtgg agaattgatg
     3841 gcttcagata caagcaatcc aatgctgatt cgccgtccag ttcaaaaatc tggttatatt
     3901 gtcattacct ctgacagtgg actaaaaggt tcttataatt ccagtatttt gaaggctgtg
     3961 atggggatga ttgaacagga ccatgactca aaagatgagt atgagattat tgccattggt
     4021 agtatgggag ctgatttctt ccgtgctcgt ggtatcaatc ctgtctttga attgcgtggt
     4081 ttagcagaca atccaagttt tgaagaggtt caaaaaatca tttctaagtc tgttgagatg
     4141 tacaagaatg aactctttga tgagttgtat gtttgttata accaccatgt caatagtttg
     4201 accagtcagg tgcgtgtaca acagatgctt cctgtagagg atttggacca caatgaagca
     4261 gatggttata cagctacctt tgagttggaa ccaaaccgtg aggttatttt ggaacaactc
     4321 ttgactcaat atgcagaatc aactatttat ggagcgattt tggatgccaa aactgctgaa
     4381 aatgcagcag gtatgacagc catgcagaca gcgacggata atgctaagaa tgtcattaac
     4441 gatttgacaa tccaatacaa tagggctcgt caggcagcga ttactcagga aattactgag
     4501 attgtagctg gtgcctcagc ccttgagtaa tagaaataga ggaaatagaa tgagttcagg
     4561 caaaattact caggttgtcg gaccagttgt agacgttgcg tttgcagcag aagataaact
     4621 tcctgagatt aacaacgcac tcgttgtata taaaaatgat gattccaaac aaaaagtcgt
     4681 gcttgaagtg gctttagaac ttggtgatgg cgttgtacgg accattgcca tggaatcaac
     4741 ggatggattg acacgtggga tggaagttct cgatacaggt cgtcccatct ctgttccagt
     4801 cggtaaagaa acgctgggtc gtgtcttcaa tgtgttggga gataccattg accttgaaga
     4861 gtcttttccg gcagattttg aacgtgagcc tatccataag aaagcgccgg cttttgacga
     4921 attatctact tcaagcgaaa ttttggaaac ggggattaag gttatcgacc tcctagcacc
     4981 ttatctaaaa ggtggtaagg ttggtctctt cggtggtgcc ggtgttggta aaaccgttct
     5041 tatccaagaa ttgattcaca atattgccca agaacacggt ggtatctctg tatttaccgg
     5101 agttggcgag cgtacccgtg aagggaacga tctttactgg gaaatgaaag aatcaggtgt
     5161 tattgaaaaa acggccatgg tatttggtca gatgaatgag ccaccaggag ctcgtatgcg
     5221 tgttgctctt actggtttga ccattgcgga atacttccgt gatgtggaag ggcaggatgt
     5281 tcttctgttc atcgataata tcttccgttt cactcaggct ggttcagaag tgtctgccct
     5341 cttgggtcgt atgccatcag ccgttggtta tcagccaaca cttgcgacgg agatgggaca
     5401 attgcaggag cgtattacct caaccaagaa gggttctgtt acatctattc aggctattta
     5461 cgtacctgcg gatgactata cagacccagc tccagcgaca gccttcgctc acttggattc
     5521 aacaactaac ttggaacgta agttgactca gcttggtatc taccctgcgg tggatccatt
     5581 ggcttcgtca tcacgtgcac ttgctccaca aatcgttggt gaagagcact atgcagtagc
     5641 tatggaagta aaacgtgtcc ttcaacgtta ccaagaattg caagatatta ttgccattct
     5701 cggtatggat gaattgtcag atgaagagaa gaccttggtt ggtcgcgctc gtcgtatcca
     5761 attcttcctc tctcaaaact tcaacgttgc ggagcaattt acaggtatgc caggttctta
     5821 tgtgccagta gctgaaacgg tgaaaggctt taaggaaatc ttggacggca aacacgacca
     5881 tctaccagaa gatgccttcc gaaatgttgg ttcaattgag gatgtggtcg ctaaagctgc
     5941 taaaatgaaa ttctagaggt ggcttatggg acaaatgact gtacaaatcg taacaccaga
     6001 cggtatcaaa tatgaccatc atgcagcatt tgttttggtc aaaacggttg atggtgagat
     6061 gggtgtctat tctggacatg aagaactgat tgcagttttg gaaatcggtg aaatgaaagt
     6121 gcgtcgtgtt gatgatgaaa accatgtaga ctggattgcg gtcaatggtg gaatcattga
     6181 agtcaacaag gatattatta cggtcatttc tgattccgct gagcgggaac gggatattga
     6241 tattagtcgt gcggaacgtg ccaaattgcg cgcggaacgt gaattggaag aagcacagac
     6301 tgctcgtaat attgatatgg agatgcgtgc aacagtcgcc ctccaacgtg cgataaatcg
     6361 tattcgtgtt gggaaacatt aatctatatg ggattgaact tggttcagtt ccatttttta
     6421 atttcatggt ataatggaaa catggtaatt tcaattttac agttttttag tcatatattg
     6481 tttatctatc tggctcatca tctcttggtt acaacagttg attggtcacg gtggttgaag
     6541 gtgacggggg acaatcagcg taaaatcaat ttgctgattc tctttctggc aatagcactg
     6601 gggtacttag tctcgacttt ctttttagaa ttgttgatga tgggacgctc ttttgcaaat
     6661 atgtgattta agataagaaa aggataagaa atggatacaa ttattgttac aggtagtaaa
     6721 aacggtttga aaggacaggt tgagattgag ggggcgaaga atgccgttct gcctttattg
     6781 gcagcaacag ttctagcaag tcaagggtaa accaaattga ctcaggttcc tattttgtct
     6841 gatgtctata caatgaataa tgttgtacgt ggtctgggag ttcgtgtgaa atttgacgag
     6901 gaaacaaaga ctatcgatat tgatgcaaca ggtaaacttg gtagcgaaac tccttataag
     6961 tatgtgagtc aaatgcgcgc ctctattgtt attcttggtc cgattttggc acgcaatggt
     7021 tatgctaagg tttctatgcc aggaggttgt acaattggta gccgtccaat tgatttgcat
     7081 ttgaagggct tgcaggcact tggtgccaag attaaacaac gtgcgggtta tattgaggcg
     7141 agtgcagaga aattgcaggg ggctcatatc tatcttgatt tcccaagtgt tggggctacg
     7201 caaaatttga tgatggctgc aactctggcg cagggtacaa cggtattaga aaatgcagcg
     7261 cgagaacctg aaattgttga cttggctatt ttcttaaaca aaatgggggc caaagttaag
     7321 ggagcaggta cagagacgat tacgattact ggtgtagaag aattgactgg cgcagaacat
     7381 caagtggtgc aagatcgtat cgaagcgggt acctttatgg tggcagcggc aatgactggt
     7441 ggcgatgtct tggtcaagga tgctgtctgg gagcacaacc gtccacttat ttctaagatg
     7501 ttggaaatgg gagttgaggt gacggaagaa gctgaaggga ttcgagttcg ttcgcaagtg
     7561 gataagctta aacctgtaac agtaaaaact ttgccacacc caggcttccc aacggatatg
     7621 caggctcaat ttacagctct aatggcagtt gcaaagggtg aatctaccat gattgaaaca
     7681 gtatttgaga atcgtttcca gcatttggaa gaaatgcgtc ggatggattt gcattcggaa
     7741 attttacgag atacagctat catcacggga ggacttgctc tgcaaggtgc tcaggttatg
     7801 tctactgatt tacgagcaag tgccgctttg attctggctg gtttggttgc tgaaggtgag
     7861 acgattgtag gtaaattaac gcacttagat cgaggttact atcgttttca tgagaaatta
     7921 gctgctttag gtgcaacgat tgaacgtgtg agtggagaag atgaaaatgg ataaggataa
     7981 tcttagctat gttggtaaaa atttaatctt agtagcagtt gttttgttga ttgctatttt
     8041 ggtgtttatt ttaggattaa tggttggtta cggtgtcata ggagatggag acaatgtatt
     8101 tgcggtgttg tcaccagcta agtggcaaga actaatcggt aaatttacag gaaagtaggc
     8161 tggacctgct tttttgatgg agagaaaatg gcgaagaaaa atgtaaaaaa acaagcaatg
     8221 agtctgctca gcttattggc tacgattgtt gtagtagcgg gtggctatct tttaagtgat
     8281 aacaagagca gtaacgttgc tgattattcc tattatgtca atcagtctaa ggcaagtgaa
     8341 ggcacaccta gtcaggaact ggctagttcg gtattgacag aagatgtaaa aaagcaactg
     8401 gggaattcga ttgaatggaa tggcgctgga gcatttatta ttaacggtaa tcaaacggat
     8461 ttagatgcat cggttgccag tgttccttat ggtgataata agacaaaaac agtccaggga
     8521 gaaacggttc caacggtagc caatgcgctt ttagctaaat ctacacgtca gtataaggac
     8581 cgtgaagaaa taggaaatgg tcggacttct tggacacctg cgggttggca tcagatccat
     8641 gatttaactg gagaatatga ccatgcagtg gaccgtggtc acctcctagg ttatgctttg
     8701 attggtggat tgtctggctt cgatgcttca accagcaatc ctaagaatat tgcagttcaa
     8761 acagcttggt ccaaccaagc taacgaccaa acttcaactg ggcagaatta ttttgaaagt
     8821 cagattcggc gggccttgga taaaaataag cgtgtccgct atcgtgtgac cttggtgtat
     8881 gctgagagtg aagaccttgt tcctgtcgga agccatctag aggcaaaagc agcagatggt
     8941 agcttagagt tcaatgtgtt cattccaaat gtgcagagtg gtctcagtat caattatcat
     9001 agtggggaaa ttgcagtaaa tcaataaata gtcagatgaa ttcttcctcg ctaaatcaaa
     9061 tatatcagac gattttcacg tgaaatcgtc tttttttgcg tgtaattaaa aatatttaca
     9121 aaaacagttg acaaatcatc tgatgaatat tagaatatag ttaaagaaaa cgcttacgac
     9181 tttgtcgtag aaaacattta ggaggaattt ccaatggaaa aacatgttga gcaacgtgtc
     9241 gaagacgtta cttataacaa agccaagtta tggcaaatca tattatttgc gatgaacaat
     9301 tcatcgacga atatttactt ggttgctttt actttcgtga cttatttatc gacaggtgtg
     9361 cttggtcttg cagccctgtt tgttagtcaa ctcatgggct atattcgtat ctttgatggt
     9421 ttcattgatc ctacaatcgg agttatcatt gataaaacgg atactaagtt tggtaaatat
     9481 cgtcctattt tggttttggg gaatatcatt acagcagctt ct
//
LOCUS       DASFQD010000094         9084 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.095, whole genome shotgun sequence.
ACCESSION   DASFQD010000094 DASFQD010000000
VERSION     DASFQD010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 9084)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9084)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9084
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.095"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(65..244)
                     /locus_tag="U1021_001708"
     CDS             complement(65..244)
                     /locus_tag="U1021_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002961120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712223.1"
                     /translation="MTCSYCGASNTILCKQPHGYASVTPADKKMAFNGQTLYHDICKN
                     CGTVVRSFIKEPEKL"
     gene            complement(249..467)
                     /locus_tag="U1021_001709"
     CDS             complement(249..467)
                     /locus_tag="U1021_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018030174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4712224.1"
                     /translation="MANIITNLKEYRKAKKISQQELAQLVGVRRETIVHLENNRYNPS
                     LEMALKIAEIFDCHVEELFQLKKEAEND"
     gene            complement(469..1041)
                     /locus_tag="U1021_001710"
     CDS             complement(469..1041)
                     /locus_tag="U1021_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018167100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712225.1"
                     /translation="MLKKYAWPLASLILTGAIWFLTPASDPTWIKNSIFAGFLIYLLL
                     LFLFISKLPKPDPDEPFYFGLSEKIYTVTLLAAMGIYGKGIWVITPATNPSWIKDVFL
                     GFGLFLLMAFFLYFAFKKVDEKPDDRFYTNLAKAACLSLCLVLLSLMILTIITFFQPF
                     TLTAGMILIFSATMILAFDFAFFFFEKRGG"
     gene            1345..2097
                     /locus_tag="U1021_001711"
     CDS             1345..2097
                     /locus_tag="U1021_001711"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002985521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEM4712226.1"
                     /translation="MSRKPIIAGNWKMNKNPQEAQAFVEAIAGKLPAGDKIEAAIAAP
                     AVDLNALLWFAKDSELKVAAQNCYFEDAGAFTGETSPKVLAEMGVNYVVIGHSERRDY
                     FHETDEDINKKAHAIFRNGLTPIICCGESLETYEAGKAVEFVGAQVSAALKDLTAEQV
                     ASLVIAYEPIWAIGTGKSATKDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVNPS
                     NVAEYMACPDVDGALVGGASLEAESFLALLNF"
     gene            complement(2150..2959)
                     /gene="yidA"
                     /locus_tag="U1021_001712"
     CDS             complement(2150..2959)
                     /gene="yidA"
                     /locus_tag="U1021_001712"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase"
                     /protein_id="HEM4712227.1"
                     /translation="MSIKLVAIDIDGTLLNSQHQITAEVHSAIQEAKKAGVKIVIATG
                     RPISGVQAILEELNLTEAGDYVITFNGGLVQDAATGEDIIKDTLTYEDYLDIESAARK
                     LRLPMHASTKEGIYTANRNIGKYTIYESTLVSAPIFYRTPEEMADKEIIKTMMVDEPE
                     ILDAAIPLLPTSLTEKYNVAKSAPFYLEITPKTVNKGQAIIHLAEKLGLTMDQTMAIG
                     DQENDRPMLEVVGNPVVMENGNPELKKIAKYITKSNDESGVAHALREWVLK"
     gene            complement(2949..4262)
                     /locus_tag="U1021_001713"
     CDS             complement(2949..4262)
                     /locus_tag="U1021_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEM4712228.1"
                     /translation="MIEKVFRDPVHNYVHVDHELIYKLINTKEFQRLRRIKQLGTTSY
                     TFHGGEHSRFSHCLGAYEIARRITQKFEDKYPQIWDTNESLLTMVTALLHDVGHGAYS
                     HTFERLFDTDHEEMTCAIITSPETEINALLKQVSPEFPDKVASVIKHTYPNKQVVQLI
                     SSQIDVDRMDYLLRDSYFTGANYGEFDLTRILRVIRPTENGIAFKESGMHAVEDYVLS
                     RYQMYMQVYFHPASRSMEVLLQNLLNRAKLLYTGEQEFFARTSPRLLPFFEHRIRLTD
                     YLSLDDGVMNTYFQSWIDGPDRILSDLAQRYINRKVLKSITFKAEEEEALDRLRSLVA
                     DVGFDPEYYTAIHHNFDLPYDIYRPNAEKKRTQIEIYRKDETLVELSSLSPIVHSLSG
                     TIHGDSRFYFPKEMLEETGIFAPQIADFNSHIHNDHFIIGESNEH"
     gene            4361..5248
                     /locus_tag="U1021_001714"
     CDS             4361..5248
                     /locus_tag="U1021_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEM4712229.1"
                     /translation="MNNQIILLTIQVFIVALILWMLYTILSYAKKHDISLKEKFWTGF
                     GIGYVTDLLDTLGIGTFATTTTMFKLTKLVEDDRKIPATMTTAHIIPVLVEALLFITI
                     VEVDMVTLIAMAAAAFTGAFVGAKVTQKWDTKKVQRILGILLIIAACFMVYRMITNPG
                     ADLTNEVKGLTGWKLAVGIAFDFMVGMLMSMGLGNYAPELIFFSLMGISPAVALPVMM
                     LNAAMIMTAGAKQFIQSGRVNWPGVPGIIVGGVLGVLTAAFFLSNLDINNLKILVVFI
                     AAYTGFTLLRSSFVTRIKK"
     gene            5260..5646
                     /locus_tag="U1021_001715"
     CDS             5260..5646
                     /locus_tag="U1021_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1934 domain-containing protein"
                     /protein_id="HEM4712230.1"
                     /translation="MDIHLRNEIDLDGQIEVVDQQFQVEVKEKDGNLYLIYSNDEAEK
                     VVIKCDEEELVMTRFSTPKSIMRFISGKEAIVTIPTPLGIQHFVTDTKRYQLNRSDQS
                     VQLQYELKGLENQQLFASYDLEISWK"
     gene            6122..8809
                     /locus_tag="U1021_001716"
     CDS             6122..8809
                     /locus_tag="U1021_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010922034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HEM4712231.1"
                     /translation="MSKEQKRDLFYTQSEEQVLSSMGSSLDGLSSDEASKRLADYGRN
                     ELDEGEKRTLLAKFLDQFKDLMIIILIAAAILTVITEGSHGLTDAIIILAVVILNAAF
                     GVYQEGQAEAAIEALKNMSSPVARALRDNHVVEVDSKDLVPGDIVLLEAGDVVPADMR
                     LLEANSLKIEEAALTGESVPVDKDLSAVLAEDAPIGDRVNMAYQNSNVTYGRGLGVVT
                     NTGMYTEVGYIAGMLANADETDTPLKQNLHQLSKVLTYAVLVIAAVTMAVSVFVRGEG
                     ILPALMTSVALAVAAIPEGLPAIVTVVLSLGTQVLAKRNSIIRKLPAVETLGSTEIIA
                     SDKTGTLTMNQMTVEKVYTNGQLVDAKEALDASNTTLRVMNFANDTKVDPTGKLIGDP
                     TETALVQFGLDQNFDVREVLVSEPRVAELPFDSTRKLMSTVHQQAAGNFFVAVKGAPD
                     QLLKRVTQIEENGTIRPITDADKQAILATNKDLAKQALRVLMMAYKYVDAIPELESDV
                     VENDFVFSGLVGMIDPERPEAAEAVRVAKEAGIRPIMITGDHQDTAEAIAKRLGIIDP
                     NDTEDHVFTGAELNELTDEEFQKVFKQYSVYARVSPEHKVRIVKAWQNDGKVVAMTGD
                     GVNDAPSLKTADIGIGMGITGTEVSKGASDMVLADDNFATIIVAVEEGRKVFSNIQKT
                     IQYLLSANTAEVLCIFLATLFGWDVLEPVHLLWINLVTDTLPAIALGVEPAEPGVMQH
                     KPRGRNSSFFSGGVLSSIIYQGILQTALVLGVYGFALLYPEHAGDNHAIHADALTMAY
                     VTLGLIQLVHAFNVKSVYQSIFTVGPFKNKLFNWSIVAAFLLLMATVVIPGFNTFFKV
                     SILTPTQWMVTVIGSGLMVVVVEIVKFVQRKLGLDEKAI"
BASE COUNT         2544 a         1684 c         2080 g         2776 t
ORIGIN      
        1 aagggagcgg agaagaactc ttcttggatt ggtcgagttc tgtcctactc ccttgttgcc
       61 ttttctacaa tttttcgggt tccttgataa aggaacggac cacggtgccg caatttttgc
      121 agatgtcatg ataaagggtt tgaccgttaa aggccatttt tttatccgca ggagttacgc
      181 tagcatagcc gtggggctgt ttacatagga tagtattgga agctccgcaa taggagcaag
      241 tcatggtttt agtcattttc tgcctccttt ttgagttgaa agagttcttc gacatggcag
      301 tcaaaaattt ccgcaatttt caaggccatc tcgagagagg gattgtagcg gttgttttcc
      361 aggtggacaa tggtttcccg acggacacca accagttggg ccagttcctg ttggctgatt
      421 ttctttgctt ttcggtattc tttgagattg gtgatgatat tggccatctt aaccacctct
      481 cttttcaaag aagaaaaagg caaagtcaaa ggcgagaatc atagtggcgc tgaaaatcag
      541 aatcatacca gccgtgagag tgaagggctg gaagaaggta atgatagtaa gaatcattag
      601 gctgagaagg acaaggcaca ggcttaggca agcggccttg gccagattgg tatagaagcg
      661 atcgtctggc ttctcgtcca cctttttaaa agcaaagtag aggaagaaag ccatcaacaa
      721 gaagagtcca aatcctagga agacatcctt gatccagctg ggatttgtag cgggagtgat
      781 gacccaaatg cctttaccat agattcccat agcggctaag agtgtaaccg tatagatttt
      841 ttcagacaaa ccaaaataga agggctcatc tgggtctggc ttaggaagtt tggagatgaa
      901 aagaaagagg agaagcaggt agatcagaaa gcctgcaaat atgctgtttt ttatccaggt
      961 cggatcggaa gcaggggtca gaaaccagat agccccagtt aagatgaggg aggccagagg
     1021 ccaagcgtat tttttaagca tgagaatcat cctttattat tttttgagct agcttcaatt
     1081 cgtcattttt aaaatgttat ttatttctaa cttcttatgt tataaatata tcacaatcac
     1141 aaaaaactgt caagcaaaat gttaattttt tataacattt tacaacgcgg gaagaattat
     1201 tgtcatcaat gtgctgctag aggactaatt taactttcaa tgattcccag agacttttat
     1261 cagtatttct tataattggc tttaattata gatgaaacta tgctataatg gagtttgtaa
     1321 aataaaaaag aagaggtatg tgaaatgtca cgtaaaccaa tcattgctgg aaactggaaa
     1381 atgaacaaaa accctcaaga agcacaagct tttgttgagg cgattgcagg taaattgcct
     1441 gctggtgaca agattgaagc agctatcgca gctccagctg tagatttgaa cgctctcttg
     1501 tggttcgcta aagattctga attgaaagtt gcagctcaaa actgctactt tgaagatgct
     1561 ggtgccttca ctggtgaaac atctccaaaa gtattggctg aaatgggtgt taactatgtt
     1621 gttatcggtc actcagagcg tcgtgattac ttccacgaaa ctgatgaaga tattaataaa
     1681 aaagctcatg caatcttccg taacggtttg actccaatca tctgttgtgg tgagtcactt
     1741 gaaacttacg aagctggcaa agcagtagaa tttgtaggtg cacaagtttc tgcagctttg
     1801 aaagacttga ctgctgaaca agtagcatca cttgttattg cttacgagcc aatctgggca
     1861 atcggtactg gtaaatcagc tactaaagac gatgcacaaa acatgtgtaa agctgtccgt
     1921 gacgttgttg ctgctgattt cggtcaagaa gttgcagaca aggttcgcgt tcaatatggt
     1981 ggttctgtaa acccatcaaa cgttgctgaa tacatggcat gtccagacgt tgatggtgcg
     2041 cttgttggtg gtgcttcact tgaagcagaa agcttcttgg cattgttgaa cttctaataa
     2101 caaaagcatc ggattttgaa ttcgatgctt tttttgatat tttaagaggc tatttcagta
     2161 cccattctct cagagcgtgg gctacaccgc tctcatcatt tgacttcgta atgtatttgg
     2221 cgattttctt caattcagga tttccgtttt ccatgacaac aggattacca acaacttcca
     2281 acattggacg gtcattttct tggtcaccga tggccatggt ttgatccatt gttagtccaa
     2341 gcttctcagc tagatgaatg atagcttgtc ccttgttaac agttttaggg gtgatttcca
     2401 aataaaatgg tgctgatttt gctacgttgt acttctcagt caagctggtc ggtagaagtg
     2461 gaatagcagc atcaagaatt tctggctcat caaccatcat tgttttgatg atttccttat
     2521 cagccatttc ttcaggagtg cgatagaaaa tgggtgcact tactagtgtt gattcgtaaa
     2581 tggtgtattt accgatgtta cggttggcag tatagatacc ttccttggtg ctggcatgca
     2641 ttgggagcct gagtttacgg gcagcagatt cgatgtcgag ataatcctca taagtcaagg
     2701 tatctttgat aatatcttca ccagttgctg catcttggac taagccaccg ttaaaagtga
     2761 tgacgtagtc acctgcttct gtaagattga gttcttctaa aattgcttga acaccggaaa
     2821 tggggcgacc agtagcaata acaattttaa cgcctgcttt ttttgcttct tggattgctg
     2881 agtgtacttc agctgtaatt tggtgttgac tatttagtag tgtaccatca atatcgatgg
     2941 cgacaagttt aatgctcatt tgattctcca attataaaat gatcgttatg tatgtggctg
     3001 ttaaaatcag ctatttgagg tgcgaaaatt cctgtttctt ctaacatttc ttttgggaaa
     3061 tagaagcggc tatcgccatg gattgtgcct gataaggaat ggacaattgg tgatagagag
     3121 gatagttcta ccaaggtttc atctttgcga taaatctcaa tttgagtccg tttcttttct
     3181 gcattcggtc ggtaaatgtc atacggcaaa tcaaagttgt ggtgaatagc agtatagtat
     3241 tctgggtcaa acccgacgtc tgcgaccagg ctacgcaggc ggtccaaagc ttcctcttct
     3301 tcggccttga aagtgatgga tttgagcact ttcctattga tatagcgctg ggctaagtca
     3361 gataatatac gatctggtcc atctatccat gattgaaagt aagtattcat aactccatca
     3421 tccagactga ggtagtcggt tagacggata cgatgctcaa aaaaaggtaa tagccgaggt
     3481 gaagttcgtg caaaaaactc ctgttcacca gtatatagta gtttggcacg attgagtaaa
     3541 ttctgcaata ggacttccat agagcggctt gctggatgaa aatagacttg catgtacatc
     3601 tggtagcggc tgagaacgta gtcttctact gcatgcatac cagattcttt gaaggcaatt
     3661 ccattttctg tcgggcgaat gacacgtaat atcctagtta ggtcaaattc accatagttc
     3721 gcacctgtga agtaggaatc tcgtaataga taatccatcc ggtcaacatc aatctggctc
     3781 gaaatgagtt gaacgacctg tttatttgga taggtgtgtt tgataacact agcaaccttg
     3841 tctggaaact caggtgaaac ttgtttcaac agagcattga tttccgtttc tggactagta
     3901 ataatagcac aggtcatttc ctcatggtct gtatcaaata gacgctcgaa ggtatgagaa
     3961 taggctccgt gtccgacatc atggagtagc gcagtaacca tggtcagtag ggactcattt
     4021 gtatcccaga tttgtggata cttgtcttca aatttttgag taatccgtct ggcgatttcg
     4081 taggcgccaa ggcagtgcga aaagcggcta tgctcgccac catggaaggt ataggaagta
     4141 gtccctagtt gcttgatgcg gcgtagtcgc tgaaattctt ttgtattgat aagtttataa
     4201 atcagctcat gatcaacatg tacatagtta tgaactggat cgcgaaatac tttttctatc
     4261 atagtttcat tataacaaaa aagggagata aattcctgat ttttctaaaa cacaaggata
     4321 ttgctatgta cccaatggaa tcttttggta taatggagaa atgaataatc aaattatctt
     4381 attaactatt caggtcttta ttgtagccct gattctttgg atgctttaca caattctatc
     4441 ctatgctaaa aagcacgata tttctctaaa agagaaattt tggacagggt ttggtatcgg
     4501 ttatgttact gatttgctag acaccttggg gattggaacc tttgcaacga caaccactat
     4561 gtttaaactg acaaagttgg tggaagacga tcgtaaaatt cctgcgacca tgacaacggc
     4621 gcacatcata ccagtcttag tagaggcgct attgtttatt acgatagttg aggttgatat
     4681 ggtcactctg attgctatgg cagcagcggc atttacgggt gcctttgttg gtgccaaggt
     4741 aactcaaaaa tgggatacaa agaaagttca acgaattctt gggattttac taattattgc
     4801 agcctgtttc atggtctatc gcatgattac taatcctggc gcagatctta ccaatgaagt
     4861 aaagggctta actggttgga aactggctgt tggtattgcc tttgatttta tggtgggaat
     4921 gctgatgagt atgggactgg gtaactatgc tcctgagtta attttcttct cattgatggg
     4981 aattagtcca gcggttgctc ttccagttat gatgttgaat gctgctatga ttatgacagc
     5041 tggtgccaag cagtttatcc aatcaggacg agtaaactgg ccaggagttc caggaatcat
     5101 tgtcggtggg gtgctaggtg ttttgacagc tgctttcttc ctatcaaatt tggatattaa
     5161 taatttgaaa attttagttg tcttcattgc agcgtataca ggctttactc tgcttcgttc
     5221 atcctttgtt actaggatta aaaaatagta ggaggaatta tggatattca tttacgaaat
     5281 gaaattgatc tggacgggca gattgaggta gtggatcagc aatttcaagt ggaagttaag
     5341 gaaaaagatg ggaatcttta tctcatttat agtaacgatg aagctgaaaa agttgtcata
     5401 aaatgtgacg aagaagagtt agtgatgaca cgtttttcca ctccgaagtc tattatgcga
     5461 ttcatttctg gtaaagaagc tattgtgacc attcctacac cgttaggaat ccagcatttt
     5521 gtgaccgata caaaacgtta ccaattaaac cgttcggatc aaagtgtcca gttgcaatat
     5581 gaattaaagg gattggagaa ccagcagctt tttgcttcct atgatttgga aatctcgtgg
     5641 aaataatctc ttatttccag aaaaatattc ttgaatttct tgggattttt gatataatag
     5701 ttaacaaatc gagggagtag ctagcggaaa attccgtgat attgtcgtca atccgacttg
     5761 tttccggcaa tatattaaat agcgagactt gttttagaac ctgtcttcgc aagtaaggta
     5821 tttttagata agagatagtt ttttgtctat caaggcagtt ttttgaagga atactgactg
     5881 tatttcaaaa aaaactaata ctcaatgaaa atcaaagtca ggctaggcga cgccgatgca
     5941 gattgaacta aagttcatca attcaagtca acaacgcctg agtttgattt tcgaagagta
     6001 taaagatgag tgacagaaaa ctagccctag atagaagtgc cgagctgtga agagaggttc
     6061 tcattaaaca ggtctctttt ttatttgtta ggtaaaaaag ggaccgagaa ggagaaggaa
     6121 attgtcaaaa gaacaaaaac gcgatttgtt ttatacacag agcgaagagc aagtattgtc
     6181 aagcatgggg tcttctttgg acggtttgtc tagtgatgag gcaagcaaac gtctagcaga
     6241 ctacggtcgt aacgaattgg atgagggtga aaaacgcaca ctcttagcta aattcttgga
     6301 tcagttcaaa gacttgatga ttatcatttt gattgcagca gcaatcttga cggtgattac
     6361 agaaggttca cacggtttga cagatgccat tatcatcttg gccgtggtta tcttgaacgc
     6421 tgcctttggt gtttatcaag agggtcaagc tgaggcagct attgaggcgc taaaaaacat
     6481 gtcaagccca gttgcgcgtg cgcttcgtga caatcatgta gtcgaagttg attctaaaga
     6541 cttggtacca ggtgacatcg tcttgcttga agcaggtgat gttgtccctg ccgatatgcg
     6601 tttgttggaa gctaactccc tcaaaatcga agaagcagct cttacaggtg agtctgtacc
     6661 agttgataaa gatttgtcag cagttttggc tgaagatgca ccgatcggtg accgtgtcaa
     6721 catggcctac caaaactcaa acgttactta cggacgtggt cttggtgtgg ttacaaatac
     6781 aggtatgtac acagaggttg ggtacatcgc tggcatgctt gctaatgctg atgagactga
     6841 tacaccattg aaacaaaact tgcaccagct atcaaaagtc ttgacatacg cagttcttgt
     6901 aattgcagcg gtaacgatgg ctgtttcagt cttcgtacgt ggtgaaggta tcttgcctgc
     6961 tcttatgact tctgtagctc ttgcggttgc ggccattcca gaaggtttgc cagctattgt
     7021 aacggttgtc ctttcacttg gtactcaagt attggctaag cgtaactcga tcatccgtaa
     7081 gttgcctgct gttgaaacac ttggttcaac tgaaatcatc gcatcagata aaactggtac
     7141 tttgactatg aaccagatga ctgttgaaaa agtctataca aacggtcaat tggtggatgc
     7201 taaagaagct ttggatgcaa gcaatacaac gcttcgtgtt atgaactttg ccaacgatac
     7261 aaaagttgac ccaactggta aattgatcgg tgacccaact gaaacggcac ttgttcaatt
     7321 tggtttggat caaaactttg acgttcgtga agtcttggta tctgagcctc gtgtggctga
     7381 attgccattt gactcaacac gtaaattaat gtcaactgtt catcaacaag ctgctggaaa
     7441 cttctttgta gctgttaaag gtgccccaga ccaattgctc aaacgtgtaa cgcaaattga
     7501 agaaaatggg acaattcgtc cgattaccga tgcggataaa caagccattc ttgccactaa
     7561 caaggacttg gctaaacaag cccttcgtgt cttgatgatg gcatacaagt atgttgatgc
     7621 tattcctgaa ttggaatctg acgttgttga aaacgacttt gtcttctcag gtttggttgg
     7681 tatgattgac cctgagcgtc ctgaagcggc agaagctgtt cgtgttgcta aggaagctgg
     7741 tatccgtcca atcatgatta cgggtgacca ccaagataca gctgaggcga ttgcaaaacg
     7801 tcttggtatc atcgatccaa atgatacaga agaccatgta tttacaggtg cagagctcaa
     7861 cgaattgacg gatgaagagt tccaaaaagt cttcaaacaa tactcggtat acgctcgtgt
     7921 atctccagaa cataaggttc gtatcgttaa ggcttggcaa aatgatggta aggttgttgc
     7981 catgactggt gacggtgtta acgatgcgcc atcacttaag acagccgaca tcggtatcgg
     8041 tatgggtatc actggtacgg aagtttcgaa aggtgcctct gatatggtcc ttgcagatga
     8101 caactttgca actatcattg tggcggttga agaaggacgt aaggtcttct caaacatcca
     8161 aaaaaccatc cagtatctct tgtcagccaa cactgctgag gtattgtgta tcttccttgc
     8221 taccctcttt ggttgggacg tattggagcc agttcatctt ctttggatca atttggtaac
     8281 agatacactt ccagcgattg cccttggtgt tgaacctgct gaaccaggtg ttatgcagca
     8341 caaacctcgt ggtcgtaact caagcttctt ctcaggtggt gtcttgagtt cgattatcta
     8401 tcaaggtatc cttcaaacag cacttgtctt gggcgtatat ggttttgcac ttctttaccc
     8461 agagcatgct ggagataacc atgccattca tgcggatgct cttacgatgg catatgttac
     8521 tcttggattg attcagttgg tgcatgcctt caacgttaag tctgtttacc aatctatctt
     8581 taccgttggt ccattcaaga acaaactctt taactggtct atcgtagctg ccttcttgct
     8641 cttgatggcg actgttgtga ttccaggatt caataccttc ttcaaggtat ctatcttgac
     8701 accaactcaa tggatggtaa cagtaatcgg ttcaggtctc atggttgtcg ttgtagaaat
     8761 tgttaagttt gttcaacgta agttgggatt ggatgaaaaa gctatctaat atagttattc
     8821 ggcttatctt ttattacttc gttaactcgc cttgccgtac ttcagtacag cctgcgcctc
     8881 gttgccttgt actaaaagca aactgaagac tatatcattt gaaaaagctc agatttagtg
     8941 gtctgagctt ttttctgtac tgataatgta ttttgggaag atttcttgtc ccaataaagt
     9001 aatggctagt gctagtatga ggaggatggt tttgacaaga gttggtaagt taaacagtaa
     9061 ggctattggt acgatagcca agct
//
LOCUS       DASFQD010000095         8846 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.096, whole genome shotgun sequence.
ACCESSION   DASFQD010000095 DASFQD010000000
VERSION     DASFQD010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 8846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8846
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.096"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..556)
                     /locus_tag="U1021_001717"
     CDS             complement(<1..556)
                     /locus_tag="U1021_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000191296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reticulocyte binding protein"
                     /protein_id="HEM4712232.1"
                     /translation="MTQEQLLEMLRARLPRDQILLESFLRYQAVHFDEDWDSLIQNFT
                     TQRGIVTSPVQVVRFETEVFAFVEASPFDGVTDLSSYTQTFGQAGLKKLHQLSSDEKA
                     LVIEVALFNLATRFHLLDQEGAYQSISVASLLDKSKAANLVNVYRVANNLSDRISRDI
                     EQFLLTYEPELISTQETVEEREGAA"
     gene            complement(606..1157)
                     /locus_tag="U1021_001718"
     CDS             complement(606..1157)
                     /locus_tag="U1021_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014294879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712233.1"
                     /translation="MAWNYDTISKTLSDMALENYEDMVKAFLAMELSIKNKSLLDTLY
                     QDFRSIDDLSLVSDDLRLRADGYQEQLQEEVTDLLDKLYRTGEGASFIMEVIASNNIF
                     ETLSQYEVLNEEDYSSFTLETLQDIIQKELSLTSQDYFGDVTYLALQKDLLDQKSHFL
                     QQYVTTLMDKLPQEKDQSALVLD"
     gene            complement(1141..1332)
                     /locus_tag="U1021_001719"
     CDS             complement(1141..1332)
                     /locus_tag="U1021_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003093624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEM4712234.1"
                     /translation="MEPKNIYTRDSDQDGLTDAQELALGTNPFSSDTDSDGLTDLEEV
                     QQGLNPIRQRKESSYGLEL"
     gene            complement(1333..6237)
                     /locus_tag="U1021_001720"
     CDS             complement(1333..6237)
                     /locus_tag="U1021_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006739811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4712235.1"
                     /translation="MTKQCHHHFLVNQEKAEKHVFRKSKKYRTLCSVALGTMVTAVVA
                     WGGQVAQADEVVTPSQGKTVQLTENPATNLPEAQPTPVAEQTNSLASTGQSHGAITVT
                     VPHDVVTQAVNQATTEGVTTVQDQPMDLGNTTSASETSKQLDKAEADAAKQAEAITQV
                     TNTYKADKAAYEQDKTRVEQGNAALAVSHKEATQAGNALNSSVDTMVSEVKTQDKSAN
                     VTITTQTVTSGDGSTVSGYQDYTSAVAAIDKQNKDNLSKYESKKKDADAIVAKNLLIQ
                     KANEDGVAKAKADNEAIDKRNQAGQKAVDDENKAGQAAVDAHNKDQQKLVTDREAEIT
                     EITKRNKEKEEAAKKENDAIDAYNAKEMERYKRDLAEISKGEEGYISQALAQALNLNN
                     GEPQARHSADTRNPNRIVAKGDAMLGGYSKILDSTGFFVYDTFKTGETLSFTYQNLQN
                     ARFDGKKITKVAYDITNLVSPAGTNAVQLVVPNDPTEGFIAYRNDGTGNWRTDKMEFR
                     VKAKYFLEDGSQVSFTKEKPGVFTHSSLNHNDIGLEYVKDTSGKFVPINGSTIQVTNE
                     GLARSLGSNRASDLKLPEEWDTSYSKYAYKGAIVSTVTSGNTYTVTFGQGDMPQNVGL
                     SYWFALNTLPVARTVKPYSPKPHVTPKLEPVPEPVKVVPKTFNPKTFTPEPPVSFKEK
                     PLEKVTQPSLTLTKVTLPKEPKPEPLPKAPQVPTVHYHDYRLTTTPEIVKEVINTDQV
                     NLHDKTVAKDSTVIYPLTVDAFSPNRAKTTSLTFEDYLPAGYAFDKEKTQAENGNYTL
                     SFDAAKNFVTLTAKEALLQEVNKDLTKSYQLVAPKLYGSLQNDGATYSNSYQLLINKG
                     TPNAYTVTSNVVTVRTPGDGTTTSRIEPQKKNENEDGVVINDTVVALGTTNHYRLTWD
                     LDQYKGDRSSKETIARGFFFVDDYPEEVLDLVDKGTGITTPDGKAVSGITVKAYASLS
                     EAPKDIQDKLAHAKISPKGAFQVFMPNDNQAFYDQYVKTGTSLNLVTKMTVKDSLYGQ
                     TKTYRNKAYQVDFGNGYETDEVTNTLVSPTPKKQNLNKDKVDINGKPMVVGSQNHYTL
                     SWDLDQYRGIKADKAQIAQGFYFVDDYPEEALLPDDAGIQLVTTDGKAVSGVTVKTYT
                     SLSEAPKPLQAALSKRKIAPKGAFQVFMAEDPQAFYDSYVTKGQNITIITPMTVRESM
                     LNSGKSYDNVAYQVDFGQAYETNTVTNHVPKVTPHKTNTNKEGVSIDGKTVLPNTVNY
                     YKIVLDYSQYKDLVVTDDVLAKGFYMVDDYPEEALSLNADGIQVMDKAGTLVKGISVK
                     AYASLSEAPKVVQDAMAKRQFTPKGAIQVLSADDPKAFYEAYVNTGQTLVVTLPMTIK
                     NELTKTGGKYENTAYQIDFGLAYVTETVVNNVPKLDPQKDAVIDLSQKEKSLDGKEVA
                     LNQVFNYRLVGALIPGNRATPLIEYRFDDDYDESHDDYNGVYKAYTLVDVTLKDGTVL
                     PKGTEVTKYTLQHVDTSKGTVTISFDQEFLEKLAEESEFQADVYVQMKRSASGEVENT
                     VLHTVNGYTISSNTVKTTTPEPEPPTPNQPTPPQPPIPTQEPPVPASVLPNTGESQSL
                     LALVGGGLLLGLAYGLSKRKMEDN"
     gene            complement(6504..7097)
                     /locus_tag="U1021_001721"
     CDS             complement(6504..7097)
                     /locus_tag="U1021_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001012715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712236.1"
                     /translation="MNGDLLKLAAKNFEPLLKKKITIELGRKGQKTVLDILFSKDHFF
                     HLAGLHKLNDIHFSHKKSSLVFDDILDDRINSDLLESSLYYDKKGVRSRLEILSYLYD
                     GFTKPNLVVRKAKNFPIKGSKLRWSYLVEFYIDDMRLGEFFIDNYRSGHSNEFIGVSI
                     FEKSQKDYTVNQTKFTILSIYETDTVSGNREVLFTRM"
     gene            complement(7342..>8846)
                     /locus_tag="U1021_001722"
     CDS             complement(7342..>8846)
                     /locus_tag="U1021_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000656693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HEM4712237.1"
                     /translation="DLKELSEEGAYLALQELDNPFQNQTEDDALTMTVRYGYEVIDDK
                     PTLHHHIILEAKENQVIVAPMDGKVSLDGENIIITSGKGLNKAQLTLFNSHSGRVTDG
                     QKVKAGKVIGQTKDGAGLKVTYQKVDDDSEKLVYVNPAFYFPKVIQLQTTILPTIGQF
                     GGDEFSRAKAIYEYLKSQGATNQAIAAILGNWSVESSINPKRAEGDYLSPPVGATDSS
                     WDDEGWLSLNGPAIYNGRYPNILRRGLGLGQWTDTADGSRRHTLLLEYAKGKNQKWYD
                     LGLQLDFMLHGDNPYYTNWLKDFFKNSGSPASLAQVFLIYWEGNSGDKLLERQTRATE
                     WYYQIEKGFSQPNGGTAQSDPKALEAVRGDLYDKSIPGGGDGMGYAYGQCTWGVAARI
                     NQLGLKLKGRNGEKIPIISTMGNGQDWVATAARLGGDTGKQPKAGAIISFAGGGHGSP
                     TEYGHVAFVEKVYPDGSFLISETNVNGNPNYTFRKLSGVDSTISFAYTTK"
BASE COUNT         2330 a         1927 c         1771 g         2818 t
ORIGIN      
        1 cagctgcacc ctctctttcc tctaccgttt cctgggtgct tattagttca ggttcataag
       61 tgagaagaaa ctgttcaata tcacggctaa tacggtcaga caaattattg gccactcgat
      121 agacattgac caaattagca gctttgcttt tatccaaaag agaagctacc gaaatggact
      181 gataggcgcc ttcttggtct aagagatgaa agcgagtggc taggttaaag agggctacct
      241 caatcaccaa ggctttctca tcacttgata attggtgtaa cttctttaat ccagcttgac
      301 caaaggtctg tgtgtagctg cttaggtccg tcactccatc aaaggggctt gcctctacaa
      361 aagcaaaaac ttctgtttca aagcgaacca cttgaacagg tgaggtgact attcctcttt
      421 gggttgtaaa attttggata aggctatccc aatcctcatc aaaatggact gcttgatagc
      481 gtaaaaagga ttccaaaaga atctggtcac gtggcaatct tgcccgcaac atttcaagta
      541 attgttcttg agtcatatgt tcctccaatt aaaaaggggc tgagaggtat tctcagccca
      601 ctgctttagt ctaggaccaa ggcgctttgg tctttttctt gtggtaactt atccattaaa
      661 gttgtcacat actgttgtaa gaaatggctt ttctggtcta acaaatcttt ctgcagggcg
      721 agataggtca catctccaaa ataatcttga ctcgttaaag acaactcctt ttggataatg
      781 tcctgcaagg tctctaaggt gaaagacgag taatcctcct cattcaaaac ctcatactga
      841 gaaagggtct caaaaatatt gttggacgca atcacttcca taatgaaact agctccctca
      901 cctgttcgat agagtttatc caagaggtcc gtcacttctt cttgaagctg ttcctgataa
      961 ccgtctgctc ttaggcgcag gtcatcacta actaaagaca agtcatcaat gctcctaaag
     1021 tcttgataga gcgtatcaag aagtgacttg tttttgatac ttaactccat ggctaaaaag
     1081 gctttaacca tgtcttcata gttttctagt gccatatcag agagagtttt tgaaatcgtg
     1141 tcataattcc aagccataac tgctctcctt acgctgtcga attggattca agccttgttg
     1201 gacttcttca aggtctgtca gtccgtcact atccgtatca ctgctaaaag gattagtccc
     1261 taaagctaac tcttgagcat ccgttagacc atcttggtct gaatctcttg tgtaaatgtt
     1321 tttgggttcc atttagttgt cctccatttt gcgtttagaa agtccgtaag ctaggcctaa
     1381 aagaagtcct ccaccgacaa gcgccaagag ggattgactc tctcctgtat ttggtaagac
     1441 acttgctgga actggtggtt cttgtgttgg aataggtggt tgaggtggtg ttggttgatt
     1501 cggagttggt ggctctggtt caggagtagt tgttttaacc gtgtttgaac tgatggtgta
     1561 gccattgaca gtatgtaaca ccgtattttc tacctctcct gaagcactcc gtttcatttg
     1621 cacgtaaaca tctgcctgaa actcggattc ttctgctagt ttttcaagga attcctgatc
     1681 aaaactgatg gtaaccgtac cttttgacgt gtcgacatgt tgtagcgtgt acttcgtcac
     1741 ttctgtccct tttggtaaaa ccgttccatc ttttagagtc acatctacta aggtataagc
     1801 cttgtaaaca ccattatagt cgtcatggct ttcatcgtaa tcatcgtcaa agcgatactc
     1861 gatgagtggt gtcgcacgat tgcctggaat aagtgctccc accaaacggt agttaaagac
     1921 ctgattcaag gcaacttctt ttccatcaag gcttttctcc ttttgtgata aatcaatcac
     1981 cgcatctttt tgtgggtcta gttttggcac attattgacc actgtctctg tcacataagc
     2041 caaaccaaag tcaatctgat aagcggtgtt ttcatacttc ccaccagtct ttgtcagctc
     2101 attcttaatg gtcattggaa gggtcaccac taaggtttga ccagtattaa cataagcctc
     2161 atagaacgct tttggatcat cagcgcttaa aacttgaatg gctccttttg gtgtgaactg
     2221 gcgtttggcc atagcatctt gaaccacttt aggcgcttct gacaatgagg cataggcttt
     2281 caccgaaatc cctttgacaa gagttcctgc cttatccatc acttggatac catctgcatt
     2341 gaggctaagc gcttcttcag ggtaatcatc caccatgtaa aaaccttttg caagaacatc
     2401 atcggttacg accaagtcct tgtactgact gtaatcaaga acaatcttat aataattaac
     2461 ggtatttgga agaacggtct tcccatcaat agacacgcct tctttattgg tattagtttt
     2521 atgtggtgtt acttttggca cgtgattcgt taccgtattg gtttcatagg cttgtccaaa
     2581 gtctacttga taagctacat tgtcataaga ctttcctgaa ttaagcatag actcacggac
     2641 agtcatagga gtgatgatgg tgatgttttg acccttcgtt acataagaat catagaaggc
     2701 ttgcggatct tctgccataa agacttggaa ggctccttta ggcgcaatct tgcgttttga
     2761 aagagctgct tgcaggggtt taggggcttc tgataagctc gtataagttt ttaccgtaac
     2821 acctgacact gctttgccat cagttgtcac aagttgaatg cctgcatcat ctggtaatag
     2881 agcttcttcg ggataatcat ccacaaagta aaagccttgt gcaatctgag ccttatcagc
     2941 cttaatgcca cggtattggt ccaagtccca tgacaaggta tagtggttct gtgaaccgac
     3001 taccatcggt tttccattga tgtccacctt atccttatta aggttttgtt ttttaggtgt
     3061 tgggctaaca agggtattgg tcacctcatc ggtttcatag ccattcccaa aatccacttg
     3121 gtaagccttg tttcgataag tcttcgtctg accataaaga ctatctttga ccgtcatttt
     3181 ggtgacaagg tttaaagaag ttcctgtttt gacatactgg tcatagaaag cctgattatc
     3241 attaggcata aagacttgga aagccccttt tggagaaatc ttagcatgag cgagtttatc
     3301 ttgaatgtct ttaggagctt ctgacagcga cgcataagcc ttaacagtaa tccctgatac
     3361 ggctttgcca tcaggagtgg tgatacctgt ccccttgtct actaagtcca acacttcttc
     3421 tgggtagtca tctacaaaga agaaaccacg agcaattgtc tctttagaag acctatcgcc
     3481 tttatattga tctaaatccc aggtcaaacg gtaatgatta gttgttccta aagccactac
     3541 cgtatcgtta atgaccacac catcttcatt ttcatttttc ttctgcggct caatacggct
     3601 agtggtcgtt ccatcaccag gcgttcgcac cgtcacgaca ttggaagtca cggtataagc
     3661 atttggggtt cccttattga tgaggagctg ataactgttg gaataggttg ctccatcatt
     3721 ttgaaggcta ccgtaaagtt tcggagccac cagttggtaa gacttggtga ggtctttatt
     3781 gacctcttga agcaaggctt ccttggcggt caaggtcaca aagttcttag cagcatcaaa
     3841 gctaagggta taatttccat tttctgcctg cgttttttcc ttgtcaaaag catagcctgc
     3901 tggaaggtaa tcttcaaagg tgaggcttgt ggttttggct cgattgggag aaaaagcgtc
     3961 tacggttaaa gggtaaatga ccgttgaatc ttttgcgacc gttttgtcat gaaggttcac
     4021 ttggtcggta ttgataactt ccttaacaat ttcaggagtc gttgtcagac gatagtcgtg
     4081 ataatgaacc gtgggcactt gtggtgcttt tggtaacggt tctggtttag gttctttagg
     4141 caaggtcacc ttggtgagtg tcaaactagg ctgagtaact ttctctaatg gtttttcctt
     4201 aaagctcaca ggtggctctg gcgtaaaggt ctttgggtta aaggtttttg gcacgacttt
     4261 aactggttct ggaactggct ctaactttgg tgtcacatgt ggttttggac tataaggttt
     4321 aaccgtccgt gcaactggta gggtgtttaa ggcaaaccaa taagagagac caacattttg
     4381 gggcatatcc ccttgaccaa aggtcactgt ataggtgttg cctgatgtaa ccgttgagac
     4441 aattgctcct ttataggcat acttactgta agaagtatcc cattcttcag gaagcttcaa
     4501 atcactggca cggtttgacc caagtgaacg agccaaacct tcgttagtca cttgaatggt
     4561 tgagccattg ataggaacaa acttacctga tgtgtctttt acatactcta aaccgatgtc
     4621 attgtgattg agtgaggaat gagtaaagac acctggtttt tccttggtga agctgacttg
     4681 agatccatct tctaagaaat acttggcctt gacacgaaac tccatcttgt ctgttcgcca
     4741 attgcctgtc ccatcattac ggtaggcgat aaagccttct gttgggtcat ttggtacgac
     4801 taactgcacg gcattagttc cagctggaga aacaaggtta gtaatgtcat aggctacttt
     4861 tgtgattttc ttaccatcaa agcgagcatt ttgaagattt tgataggtaa aggaaagggt
     4921 ttctcctgtt ttaaaggtgt cgtagacgaa gaaaccagta gaatctagga ttttagaata
     4981 cccaccaagc atagcgtcac ccttagcaac gatacgatta ggatttctgg tatcagctga
     5041 atgtcgtgct tgcggttctc cattattcaa gttaagtgcc tgagcaagag cttgagagat
     5101 atagccttcc tctccttttg aaatctcagc taaatcccgt ttatagcgct ccatttcttt
     5161 ggcgttgtag gcatcaatgg catcattttc tttcttggcg gcttcttctt tttccttatt
     5221 gcgtttcgtg atttccgtaa tctcagcttc acggtctgtg actaatttct gttggtcttt
     5281 attgtgggca tcaacagcag cttgacctgc cttgttttca tcatccactg ctttttgtcc
     5341 agcttgattg cgtttatcaa ttgcttcatt atcagccttt gccttggcaa ccccgtcctc
     5401 atttgccttt tggattaaga gattctttgc gacaatggca tctgcatctt ttttctttga
     5461 ttcgtattta gatagattgt ccttattttg cttatcaata gcagctaccg cagaggtata
     5521 atcctgatag cctgaaacag ttgagccatc tcctgatgtt acggtttgag ttgtaatagt
     5581 tacgttcgca gacttgtcct gagtcttcac ttctgaaacc atagtatcta ctgaactatt
     5641 caaggcgttt ccagcttgag tggcttcttt atgactaaca gccaacgcag cattcccttg
     5701 ttcaacacgt gttttatctt gttcataagc agctttatct gctttatagg tattggttac
     5761 ctgagtgatg gcttcagcct gcttagcagc atccgcttcc gccttatcca attgcttact
     5821 ggtctcactc gcagaagttg tatttcccaa gtccataggt tggtcttgaa cagtagtaac
     5881 tccttcagta gttgcttgat tgacagcctg tgtcacaaca tcatgaggaa ccgtaaccgt
     5941 gatagcccca tgtgattgac cagttgacgc aagactattc gtttgttcag caactggagt
     6001 tggctgagct tctggtaagt tggtcgcagg attttctgtt agctgaacgg ttttaccttg
     6061 ggaaggtgtt accacttcgt cagcttgtgc tacttggcca ccccaagcga caacagctgt
     6121 caccatggtt ccaagagcta ccgagcagag cgtacggtac ttcttacttt tacggaagac
     6181 atgcttttct gctttttcct gattgactaa aaagtgatga tgacattgtt tggtcataaa
     6241 aagtccttct tttcttttga taagtagtaa caatctgtca ctctctcctc atcataaaaa
     6301 agacgacttg attttggtat cacatcaaaa aaggacaaag aaaaaaagcc atcggtagca
     6361 gtaccgatag cctctatgaa tacttataaa caaaagggga ggactgacgc atcagatcca
     6421 cccagacgtg actagcacgc cccaattcga taaccaaatg ataaaacctt ttccctactt
     6481 tgtcaaccta gatgctagga gaactacatt ctagtgaaaa gcacctctct atttcctgat
     6541 acagtatcag tttcatagat tgaaagtatt gtaaacttcg tttggttcac agtataatct
     6601 ttttgagatt tttcaaaaat actgacacca ataaattcat tagaatgacc acttcgatag
     6661 ttatcaataa aaaactcacc tagacgcatg tcatcaatgt aaaattccac caaataactc
     6721 catcttaatt tactaccttt gatggggaaa ttctttgctt ttctaacgac aagattaggt
     6781 tttgtaaagc catcatataa atacgacaaa atttctaaac gtgacctaac ccctttttta
     6841 tcataataca acgaagattc taataagtca gagttaatcc ggtcgtctaa aatatcatca
     6901 aaaactagag aagatttttt atggctaaaa tgtatatcat ttagtttatg aagtccagct
     6961 aagtgaaaga aatggtcttt tgaaaacaga atatctaaaa ccgttttctg tccttttcta
     7021 ccaagttcaa ttgtaatttt cttttttaat aaaggttcaa aattttttgc tgctaatttt
     7081 aataagtcac cattcatagt aatctttcta cgaaaaaagg attcatacga atcctttcat
     7141 cgagtgtttt cattgttggc tcgaggtgtt cacacacaac cctactaaag caaacactac
     7201 cagtcaaacc aaccgaccaa taatgcttaa cgcttagtaa atactcttgt tatctacaca
     7261 tatagtataa cctaactact tcctaatgtc aattaaaaca tcatataaag atttatctaa
     7321 agatgtattc ttccaaaaaa tttatttcgt tgtataggca aagctaattg tactatcgac
     7381 tcctgataat ttacggaatg tatagttagg attaccatta acattggtct ctgagataag
     7441 gaaagagcca tctgggtaaa ccttctcgac aaaggcgaca tgaccgtatt ctgttggcga
     7501 tccatgacct cctcccgcaa aggaaataat cgctcctgct tttggttgct tgcctgtatc
     7561 tcctccaaga cgtgctgctg ttgccaccca atcttgacca ttacccatgg tactgatgat
     7621 tgggattttc tcaccgtttc ggcctttgag tttcaatccc aattggttga tacgagcagc
     7681 tactccccac gtacattgcc cataggcata gcccataccg tcacctccac ctggaatgga
     7741 tttgtcataa aggtctcctc gaactgcttc cagcgctttt ggatcacttt gagcagttcc
     7801 accatttggt tggctaaagc ctttctcaat ttggtaatac cactctgtag ctctcgtttg
     7861 acgttctagg agtttatcac cactatttcc ctcccaataa atgagaaaga cttgggcaag
     7921 actggctggg ctacctgaat ttttgaaaaa gtcttttaac cagttggtat agtaaggatt
     7981 gtccccatgg agcataaaat ccagttgtaa gcctaagtca taccacttct gatttttccc
     8041 tttggcatac tctaataata aagtatgtct gcgtgaccca tctgcagtat ctgtccattg
     8101 ccccaagcct aagccacgtc ttaaaatatt cgggtacctg ccattataga tagctggacc
     8161 attaagggac aaccagccct catcgtccca agaactatcc gttgccccaa caggaggcga
     8221 taagtagtcg ccttcagctc gtttgggatt gattgaggat tctactgacc agtttcctaa
     8281 aatagccgca atcgcttgat tagtcgcccc ttgactcttc aaatactcat agatagcttt
     8341 ggctctcgaa aactcatcgc ctccaaattg accaatagtc gggagaatgg tcgtttggag
     8401 ttgaatgact ttaggaaagt aaaaggctgg attgacgtaa accagtttct ctgaatcatc
     8461 gtcaaccttt tgataggtca cttttagacc agcaccatcc ttggtttgac caatcacttt
     8521 ccctgctttg actttttggc catctgtcac tcgaccacta tgactattaa atagggtcag
     8581 ctgagcttta ttcagtccct tacctgacgt gatgataatg ttctctccat ctagggaaac
     8641 cttaccatcc atgggagcca caatcacttg attttcttta gcttctagaa tgatatgatg
     8701 atgaagcgtt ggcttgtcat caatcacctc ataaccataa cgaactgtca tggtaagcgc
     8761 gtcatcttca gtctgatttt ggaaaggatt atccaattct tggagggcaa ggtaggcgcc
     8821 ttcctcactt aattccttta agtctt
//
LOCUS       DASFQD010000096         8669 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.097, whole genome shotgun sequence.
ACCESSION   DASFQD010000096 DASFQD010000000
VERSION     DASFQD010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 8669)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8669)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8669
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.097"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..1751
                     /locus_tag="U1021_001723"
     CDS             <1..1751
                     /locus_tag="U1021_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEM4712238.1"
                     /translation="LASFPNPEFYLKQATRQPTYQTPERIYLFEETNEALHLPRGILA
                     KLQEIFEMVTIRDNRNSLSPIQISFKGRLRFEQELALADLLASENGLLCAETGFGKTV
                     LGAALIAQRKCRTIILVHNRQLLEQWLERLGEFLEIEEEEAVRYTPSGRVKVIGHIGQ
                     YGASKKWRSKLVDVVMIQSLFQLDAISDFLSDYDMMIVDECHHVTALQFEKVVAQFAG
                     QYLYGLTATPERKNGHQPIVFQRIGPILHTAQSGQYDFKKRLPLHLTSFGKLDLEQSN
                     STNFASLNDWLAKDLHRNTLIVQDIFKLYQEKRNILVLVNRREHIELLEKLLIEKEMP
                     NIFCLSGASKRRDTKELLKKISELDKNSPFVLISTGKYIGEGFDMPKLDTLILAAPLS
                     WKNNLIQYAGRLHRPYQGKTEVRIVDYLDIHVPYLERMYQKRQIAYRKMAYQVGEKEQ
                     TQVFYSGRNYEEKFREDLLNTRSTVSLQLHSFTSSRIQELLGLLRGKQVVIHASKNHK
                     LSEWITGVNSDNVKVKLVPERVSTTIILLDKSIVWYGNLSPFVYHSDDQASLLRLESQ
                     SIAEELLEKFENSNIK"
     gene            1866..2588
                     /locus_tag="U1021_001724"
     CDS             1866..2588
                     /locus_tag="U1021_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712239.1"
                     /translation="MEKEVFTPDQSQSIVDAILKGYKSYLDERIEKRRTMHVSAGYAW
                     TKANHIDDALATANLNFIDKFELKHAGQSWEFLEFNSENQLLGRVCFVLKGLTRLRQV
                     FPTAVKSGKGYLFDYAQINTSYLENLSRNTDESTLFPVQMELFDDNLFELLNRSEQSI
                     NNFFFITYQADELHHLTNIQVIMPDSRTGKLIEIQNLSTFISTSNVDFNDEKYQKLQG
                     LSEIDDVADFEIIPRLASEKEA"
     gene            2602..3756
                     /locus_tag="U1021_001725"
     CDS             2602..3756
                     /locus_tag="U1021_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HEM4712240.1"
                     /translation="MFNGSRLEELRLLNGLTRADLARELEVTEQAIWQFETGVTLPKM
                     KNKIAMARFFQVEVDYFDAVDKNGSFSLSRIAFRNADLEAKKNIHIQMVYLEKMNQMI
                     DYLENFVSIPNQIIYQLVDSIEQKLQQHESLEFIADHAREVLVVSVDNANLLYSLEKS
                     GIYISERLINGNADAYSAWSRNGRPFIVLGPGKSAVRRNFDLAHELGHLLLHNQVDFE
                     ELSKEELEEKEKEANQFASYFLLPRKQFLMDFVNIVGKRVSNPDQYILLKKRFGVSIQ
                     ALEYRAYKLGLLTPQQNSYFYRQISKKGYKAVEPLDLEIPLKKPSKIRSILDVILSNN
                     LLTLSDIERNQRVSKNFISQLFSFDVKFFDKYLLQLDKFDNVIPLFSRKQ"
     gene            3771..4829
                     /locus_tag="U1021_001726"
     CDS             3771..4829
                     /locus_tag="U1021_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEM4712241.1"
                     /translation="MNKINSYKIHLPSLIPFGFILSDNRYTYREVFMEGQFEAVVEVD
                     EAGQLSSYVWDCEMEEVYTAHLVTAPAGAFVGQLREAYQSILARVEEACCIALPFSKD
                     QSNRLAQLIKEQWGDLPDYPFAKLPTYGAFRHPNNNKWYALVSQIPRDKLDGSGSQEE
                     VEIVNLKVDGREIAELLSQSGLFPAYHMSKKSWVSVLLDDTVEDQTVFALLEKSRYLV
                     GPKSYKAAQGPDYWVIPANPKVYDIDTEFAENKVVYWAQKSTIQAGDIVAIYVTAPVQ
                     AIRYVCRVLGANLENHGESDIPTEKQLMQVELLAQFSDDVLPRARMMDLGVRAVRGPR
                     RLTEGVIEVLTSEVKNLH"
     gene            4914..5906
                     /locus_tag="U1021_001727"
     CDS             4914..5906
                     /locus_tag="U1021_001727"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016502595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HEM4712242.1"
                     /translation="MKKSFIHQQEEISFVKNTFTQYLKDKLEIVEVQGPILSRVGDGM
                     QDNLSGVENAVTVNVKLIPDATYEVVHSLAKWKRHTLARFGFNEGEGLFVHMKALRPD
                     EDSLDPIHSVYVDQWDWEKVIPDGRRNLAYLKETVEQIYKAIRLTELAVEARYDIESV
                     LPKKITFIHTEDLVKNFPDLTPKERENVVAKEYGAVFLIGIGGELADGKPHDGRAPDY
                     DDWTSPSEAGYKGLNGDILVWNEALGSAFELSSMGIRVDEEALKRQVAITGDEDRLEF
                     DWHRALLNGLFPLSIGGGIGQSRLAMFLLRKKHIGEVQSSVWPQEVRDSFENIL"
     gene            6041..7888
                     /gene="typA"
                     /locus_tag="U1021_001728"
     CDS             6041..7888
                     /gene="typA"
                     /locus_tag="U1021_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEM4712243.1"
                     /translation="MTKLREDIRNVAIIAHVDHGKTTLVDELLKQSQTLDERTQLDER
                     AMDSNDIEKERGITILAKNTAVAYNGTRINIMDTPGHADFGGEVERIMKMVDGVVLVV
                     DAYEGTMPQTRFVLKKALEQNLTPIVVVNKIDKPSARPEEVVDEVLELFIELGADDDQ
                     LEFPVVYASAINGTSSLSDNPDDQEETMAPIFDTIIEHIPAPVDNSDEPLQFQVSLLD
                     YNDFVGRIGIGRVFRGTVKVGDQVTLSKLDGTTKNFRVTKLFGFFGLERKEIQEAKAG
                     DLIAVSGMEDIFVGETVTPTDAVEALPVLRIDEPTLQMTFLVNNSPFAGREGKWVTSR
                     KIEERLLAELQTDVSLRVDPTNSPDKWTVSGRGELHLSILIETMRREGYELQVSRPEV
                     IIKEIDGVKMEPFERVQIDTPEEYQGSVIQSLSERKGDMLDMVSTGNGQTRLVFLVPA
                     RGLIGYSTEFLSMTRGYGIMNHTFDQYLPVVPGEIGGRHRGALVSIDQGKATTYSIMR
                     IEERGTIFVNPGTEVYEGMIIGENSRENDLTVNITTAKQMTNVRSATKDQTAVIKTPR
                     ILTLEESLEFLNDDEYMEVTPESIRLRKQVLNKAERDKAAKKKKLATEE"
     gene            7906..8154
                     /locus_tag="U1021_001729"
     CDS             7906..8154
                     /locus_tag="U1021_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3165 family protein"
                     /protein_id="HEM4712244.1"
                     /translation="MFYLILAIMLVLFYIFVAPRNIKGTMNLIAAVFLLVALAIALVL
                     GFLRIMQFPKEIWVGLLMILIGFWAMRDIYQLNDDTKF"
BASE COUNT         2622 a         1577 c         1931 g         2539 t
ORIGIN      
        1 agctggcatc ttttcctaac cctgaatttt atctaaaaca agcgaccaga caaccaacct
       61 atcagactcc agaacgcatc tatttatttg aagaaacaaa cgaagccttg catcttccaa
      121 gaggaatact tgctaagcta caggaaatct ttgaaatggt aactattagg gacaatcgca
      181 acagtttgtc tccgattcag atttctttca aagggaggtt gcgttttgag caggaacttg
      241 ctttggcaga tttattagct agtgagaatg gtttgctatg tgctgaaaca ggtttcggga
      301 agacagtttt aggggcagcc ttgattgccc agaggaaatg tagaacgatt atcttagttc
      361 acaatcgtca actgttggag cagtggttgg aaaggttggg tgaattttta gagattgaag
      421 aggaagaggc agttcgctat actccttcag ggcgtgtaaa agtaataggg catattgggc
      481 aatatggggc ttctaaaaaa tggaggagta aattggtgga tgtggttatg attcaatccc
      541 tcttccaatt ggacgctatt tccgactttt tgtcggacta cgatatgatg attgtggatg
      601 aatgccatca tgtgacagcc ttgcagtttg aaaaagtagt tgctcaattt gctggtcaat
      661 atctatatgg cttaacagca acgccagagc gtaaaaatgg acatcaaccg attgtctttc
      721 aacgcattgg tccaatttta catactgctc aatcaggtca atacgatttt aaaaagaggt
      781 taccactcca tctaacatct tttgggaaat tggacttgga acagtcgaat agtacgaact
      841 ttgcatccct taatgattgg cttgccaaag atttacatcg caatactttg atcgtgcaag
      901 atattttcaa actatatcaa gaaaaacgaa acatccttgt cttagtcaat cgacgggaac
      961 atatagaatt attggaaaag ctacttattg aaaaagaaat gcccaatata ttttgtctga
     1021 gtggagcgag taaaagaaga gatacgaaag aactcctgaa aaaaatcagt gagctagata
     1081 agaatagtcc ctttgtcctc atttcaacag gaaagtatat tggcgagggc ttcgatatgc
     1141 caaagttgga tacactaatt ttggcagctc ctttgtcttg gaaaaataat ctcatacagt
     1201 atgcagggcg gcttcaccgt ccctatcaag gcaaaactga ggtgagaata gtcgattatc
     1261 tagatataca cgttccttat cttgaaagaa tgtaccagaa acgtcagata gcctatcgaa
     1321 aaatggccta ccaagttgga gaaaaggagc aaacccaagt attttatagt ggtaggaatt
     1381 acgaggagaa atttagagaa gatttgctga acacacgttc aacagtctct ttacaattgc
     1441 attcgttcac ttctagtagg attcaagaat tattgggatt gctccgagga aaacaagtgg
     1501 ttattcatgc ctccaaaaac cataagttaa gcgagtggat aacgggggta aatagtgaca
     1561 atgtaaaggt gaagcttgta ccagaaaggg tcagcacaac gatcatccta ttagacaaaa
     1621 gtatcgtttg gtacggcaat ttatcgcctt ttgtttatca ttcggatgac caagccagtt
     1681 tgttgaggtt ggaaagtcaa tctattgctg aagaattgct tgaaaaattt gagaattcaa
     1741 atattaaata aaaaaatccg aatactgttc tgttcggata tttctttaaa aaaagaacta
     1801 tatttgtatt aaaatttaat attttgtata aaaatatgat aaaatattga gaaatggagg
     1861 tgcatatgga aaaagaagtg tttactcccg atcaaagtca atctattgta gatgctatac
     1921 tgaagggata caagtcctat cttgatgagc gaattgaaaa gagaagaaca atgcatgttt
     1981 ctgctggtta tgcttggact aaagctaatc atatagatga tgctcttgcg actgcaaacc
     2041 taaattttat tgataaattt gagttgaaac atgcgggtca atcttgggaa tttttagaat
     2101 ttaactcaga aaatcaacta ttaggacgtg tatgttttgt tttaaaaggt cttactcgct
     2161 tgcggcaggt ttttccaaca gcagtaaaaa gtggaaaggg ctatttattt gactatgctc
     2221 aaattaatac aagttaccta gaaaatcttt caaggaatac cgatgaaagt acgcttttcc
     2281 ctgttcagat ggagttgttt gatgacaatt tatttgaact tttgaatcgg tctgaacaat
     2341 ctatcaataa ctttttcttt atcacatatc aggctgatga attacatcac ttgaccaata
     2401 ttcaagttat catgcctgat tcaagaactg ggaaattgat tgaaattcaa aatttatcaa
     2461 catttatttc tacaagtaat gtcgatttta acgatgaaaa atatcaaaag ttacaaggct
     2521 tatcagagat tgatgatgta gctgattttg agattatacc acgtctcgct tcagaaaaag
     2581 aagcttagaa aggcaaaaaa aatgttcaat ggttcaagac tggaagaatt acgacttctg
     2641 aatggcctta cacgtgcaga tttggcaaga gagcttgaag tgaccgaaca ggctatatgg
     2701 caatttgaaa ctggagttac acttccaaaa atgaaaaata agatagcaat ggctcgtttt
     2761 tttcaggttg aagttgacta ttttgatgct gttgataaga atggttcatt ctcactaagt
     2821 cgcattgcct ttcggaatgc agaccttgag gcaaaaaaaa acatccatat ccaaatggta
     2881 tatttggaaa aaatgaatca aatgatagat tatttggaga actttgtatc cattcctaat
     2941 caaataattt accagttagt tgatagtatt gagcaaaaac ttcagcaaca tgaatcactt
     3001 gagtttattg ctgatcatgc tagagaggta ttggtagtat cagttgataa tgccaatctc
     3061 ctctatagtt tagaaaaatc tgggatatac atttcagaga gattaatcaa tggaaatgcg
     3121 gatgcctata gtgcttggtc acgtaatggt cgacctttta tcgttttggg acctggaaaa
     3181 tcagcggtac gacgtaattt tgatttagca catgaactag ggcatctact cttgcacaac
     3241 caagtagatt ttgaggaact gtcaaaagaa gaattagagg aaaaagagaa agaagccaat
     3301 caattcgcct cctatttcct gttacctagg aaacaatttt taatggattt tgtgaatatt
     3361 gtaggtaagc gtgtcagcaa tcctgatcaa tatatcttgt taaaaaaacg ttttggtgtc
     3421 tcaattcaag cgcttgaata tagagcctac aagcttggct tactgactcc acagcaaaat
     3481 tcttatttct atcggcagat ttcaaaaaaa ggatataaag cagttgagcc actagatttg
     3541 gaaattccct taaagaaacc aagtaaaatc agaagtatct tagatgtcat cctttcaaac
     3601 aatcttttaa ctctgtcaga tattgaacga aatcagaggg tgtcaaagaa ttttatcagt
     3661 caattatttt catttgatgt gaaatttttt gataagtatt tgcttcaatt agataagttt
     3721 gataatgtaa ttccattgtt ttctagaaaa caatgatggg gagtagagta atgaacaaaa
     3781 tcaattctta caaaatccac ctcccctctc tcatcccttt cggttttatc ctctccgaca
     3841 atcgttacac ctaccgtgag gtgttcatgg aggggcagtt tgaggcggtg gtggaggttg
     3901 atgaggctgg tcagctgtcg tcctatgtct gggattgtga gatggaggag gtctataccg
     3961 cccatctggt gactgcgcca gcaggggctt ttgtggggca gttgcgtgag gcttatcagt
     4021 ccattttggc tcgggtagag gaagcctgct gtatcgctct gccattttcc aaagaccaaa
     4081 gcaaccgtct agcccagctc atcaaggagc agtgggggga cctgcctgat tatccctttg
     4141 ccaagttgcc gacctatggg gcttttcgcc accccaacaa taataagtgg tatgccctgg
     4201 tcagtcagat tccgagggac aagctggatg ggagcggttc tcaagaagag gtggaaattg
     4261 tcaatctcaa ggttgacggt cgggaaatag cagagctgct gagtcagtcg ggcctcttcc
     4321 ctgcctacca tatgtcgaag aagagctggg tgtcggtctt gctggatgat acggtggagg
     4381 accagacggt gtttgccctc cttgagaaaa gtcgttattt ggtgggaccg aaatcctaca
     4441 aggcggcgca agggcctgat tactgggtta ttccagccaa tcccaaggtc tatgatatcg
     4501 ataccgaatt tgcggaaaat aaggtagtct attgggcaca aaaatcaacc attcaagccg
     4561 gggacatcgt agccatctat gttacagcgc cggtacaggc cattcgttat gtttgtcgtg
     4621 tcttaggagc gaatttagaa aatcacgggg aatcagacat tccgacagaa aagcaactca
     4681 tgcaggtgga attgcttgct cagttttccg atgatgtttt gccgagagcg cgcatgatgg
     4741 acttgggagt cagggcggta cgtggtccta gacgcttgac agagggcgtg atagaagtac
     4801 tgacatccga agtgaaaaac ctccattaaa ttatcagaat atttaataaa aagactttac
     4861 aagtgggtaa aaaagagtat aataaggtgt ataaatttac gaggaggtaa ggtatgaaga
     4921 aaagcttcat tcatcagcaa gaggagattt ctttcgtcaa aaatacattc actcagtatt
     4981 tgaaagacaa gttagaaatc gtagaagtgc aaggaccgat tttgagtcgt gtcggggatg
     5041 gtatgcagga taatttgtcc ggtgtggaga atgcggttac tgttaatgtg aagttaattc
     5101 cagatgcgac ctatgaagtg gttcactcac ttgctaagtg gaagcgtcat accttggctc
     5161 gattcggttt taatgaggga gaagggctct ttgttcacat gaaggctctt cgtcctgacg
     5221 aggattcctt ggatcccatt cactcggtgt atgtggatca gtgggactgg gaaaaggtta
     5281 ttcctgatgg tcgtcggaat ttagcttact tgaaggaaac ggtagagcag atttacaagg
     5341 ctatccgtct gaccgaattg gcagttgaag ctcgttatga cattgagtct gttttgccta
     5401 agaaaatcac ctttatccac acagaggacc tggtcaagaa cttcccagac ttgacaccaa
     5461 aagagcgtga gaatgtggtt gccaaagaat acggtgcagt tttcctaatt ggtatcggcg
     5521 gtgaactggc agatggaaaa ccacatgatg gacgtgcacc agactatgat gactggacaa
     5581 gcccatctga agcaggctac aaaggactca atggggacat cttggtttgg aacgaagcac
     5641 ttggttcagc ctttgagttg tcctcaatgg ggattcgtgt ggatgaagaa gcgctgaagc
     5701 gccaggttgc tattacaggt gacgaggacc gtttggaatt tgattggcat cgtgcccttt
     5761 tgaatggtct cttcccgctt tcaatcggtg gcggtatcgg tcaatcccgt ttggccatgt
     5821 tcttgcttcg taagaaacat atcggtgaag ttcaatctag cgtatggcca caggaagtgc
     5881 gagatagttt tgaaaatatt ttgtaagagg ttgattttca atctcttttc tttttcttct
     5941 caatcaactg cctgaaaaca tttacaacaa gattatctgt gatttttgcg ccaaactgtg
     6001 atatactttt ttagttaaat taaaatatac agaggatatt atgacaaaac ttagagaaga
     6061 catccgtaac gttgctatta ttgcccacgt tgaccacgga aaaacaaccc tcgttgatga
     6121 attattaaaa caatcccaaa cattggatga gcgtacgcaa ttggatgagc gtgccatgga
     6181 ctcaaatgat attgagaaag agcgtggtat caccatcctt gcaaaaaata ctgccgtagc
     6241 ttataacggt actcgtatca acatcatgga cacaccggga cacgcggact tcggtggtga
     6301 ggttgagcgg atcatgaaaa tggttgatgg tgtagtcctt gtcgtggatg cttatgaagg
     6361 aaccatgcca cagactcgtt tcgtattgaa aaaagcgctt gaacaaaact tgacacctat
     6421 cgtggttgtg aataagattg acaaaccatc tgctcgtcct gaagaagtag tggatgaagt
     6481 gcttgaactc ttcatcgaac ttggggcaga cgacgatcaa ttggaattcc cagttgtcta
     6541 tgcgtcagcg attaatggta cttcttcatt gtctgacaat ccagatgacc aagaagaaac
     6601 aatggcacca atctttgata ccatcatcga gcatatccca gctccagttg acaactcaga
     6661 tgagccattg cagttccaag tttcactttt ggactacaat gacttcgtag gtcgtatcgg
     6721 tatcggtcgt gtcttccgtg gtacagttaa agttggtgac caagttaccc tttctaaact
     6781 agatggcaca acgaaaaact tccgcgttac aaaactcttt ggtttcttcg gtcttgagcg
     6841 taaagaaatc caagaagcta aagcgggtga cttgattgcc gtttctggta tggaagacat
     6901 cttcgtaggt gagacagtaa caccgacaga tgcagttgag gcacttccag ttcttcgtat
     6961 cgatgagcct actcttcaaa tgactttctt ggtgaacaac tcaccatttg caggtcgtga
     7021 agggaaatgg gtaacttctc gtaagattga agagcgtctc ttggctgaat tgcaaacaga
     7081 cgtatctctt cgtgtagatc caaccaattc accagataaa tggactgttt caggtcgtgg
     7141 tgaattgcac ttgtctatct tgattgaaac catgcgtcgt gaaggctatg agcttcaagt
     7201 atcacgtcca gaagttatca tcaaggaaat cgacggcgtg aaaatggagc catttgagcg
     7261 cgtgcaaatc gatactcctg aagaatacca aggttctgtt atccaatccc tatctgagcg
     7321 taagggtgat atgttggata tggtttcaac tggtaatggc caaactcgtc ttgttttcct
     7381 tgtgcctgcg cgtggtttga ttggttattc tacagaattc ctttcaatga ctcgtggtta
     7441 tggtatcatg aaccatactt tcgaccaata cttgccagtt gttcctggtg aaattggtgg
     7501 tcgtcaccgt ggtgcccttg tctctatcga ccaaggtaag gcaacgactt actctatcat
     7561 gcgtatcgaa gaacgtggta ccatctttgt caacccaggt actgaagtat acgagggaat
     7621 gatcatcggt gaaaactctc gtgaaaatga tttgactgtt aatatcacga ccgctaaaca
     7681 aatgaccaac gttcgttcag cgacgaaaga tcaaacagcg gttattaaga caccacgtat
     7741 cttgactctt gaagaatcac ttgaattctt gaatgatgac gagtacatgg aagtcacacc
     7801 agaatccatt cgtcttcgta agcaagtctt gaacaaggca gagcgtgata aggctgctaa
     7861 aaagaaaaaa ttagcaactg aggaataatt tctaggagaa gaagcatgtt ttatttaatc
     7921 ctcgccatca tgttagtact tttttatata tttgtggcac ctcgcaatat taaggggact
     7981 atgaatttga ttgcggcagt atttttactg gtagcattag cgattgcctt ggtacttgga
     8041 tttttaagaa tcatgcaatt tccaaaggaa atttgggttg gtctactaat gattctgatt
     8101 ggtttttggg cgatgcggga tatttatcaa ttaaatgacg atacaaaatt ttagcagagt
     8161 ctttgatttt tgaataccgt aatacgatat tactaaggaa ttttatccag ctttttggac
     8221 agtagtggca atctattagc taaagaaatt atattctgtg atacatcttg aagaagctct
     8281 cgttatttat aataaatgac aagcgcattt tcaaggtgtt tttatgtaga taaattttaa
     8341 tactcaatga aatccccaaa atagcaagtt cttagtacag tcatttaaat taactctgat
     8401 acatcgccgc tttcggcttg ccgtactcta cgaaagtgac tcgtttcgca agtcttattt
     8461 ccaacctaga acagcctcta ggctgttcta gctacctgca cctcagttcc ttgtctgaaa
     8521 gctaattcat tcgaccatac aaggcaatga gctgccgcca ccaacttttg tcaacatctt
     8581 agcaattcgt gttgtacagt ctgaagctga tctctataat tgacgggagt gggaaagaca
     8641 tccatacatt aaagtaatta aagataaat
//
LOCUS       DASFQD010000097         8666 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.098, whole genome shotgun sequence.
ACCESSION   DASFQD010000097 DASFQD010000000
VERSION     DASFQD010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 8666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8666
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.098"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..340)
                     /locus_tag="U1021_001730"
     CDS             complement(<1..340)
                     /locus_tag="U1021_001730"
                     /inference="COORDINATES: protein motif:HMM:TIGR04224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec-dependent serine-rich glycoprotein
                     adhesin"
                     /protein_id="HEM4712245.1"
                     /translation="MKHKRFNKDFDEVGRKSRVKMHKSGKNWIRTVMSQLSLLRVIRG
                     KGQETVSVPLVDSSERLESQRYQYLKAILASGAAVTGAAVMTSAFGEEQVAAVEQQLE
                     ETTDTLIDKDH"
     gene            769..1417
                     /locus_tag="U1021_001731"
                     /pseudo
     CDS             769..1417
                     /locus_tag="U1021_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939615.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
     gene            complement(1448..2083)
                     /gene="serB"
                     /locus_tag="U1021_001732"
     CDS             complement(1448..2083)
                     /gene="serB"
                     /locus_tag="U1021_001732"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEM4712246.1"
                     /translation="MTTGLLVMDVDSTLILEEGIDLLGEEAGLGAQVAVITERAMRGE
                     LDFEEALRERVALLKGLPVSVFDRIIKKIHFTPGAAELVSELKMRGYKVAVVSGGFHE
                     TVDRLAAQLELDYVRANRLEVVDGVLTGQVLGEIVTQDTKKACLEEWAAENGLSLSQT
                     IAMGDGANDLPMIQRAGIGVAFCAKPIVQEQAPYQINEKNLYKLIEILDSK"
     gene            complement(2135..3859)
                     /gene="ezrA"
                     /locus_tag="U1021_001733"
     CDS             complement(2135..3859)
                     /gene="ezrA"
                     /locus_tag="U1021_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation ring formation regulator EzrA"
                     /protein_id="HEM4712247.1"
                     /translation="MPTGTIILIVSIVIILIIAYVACLIVRKRNDNLLVALEERKEEL
                     FNLPVNEEVEAVKALHLIGQSQVSFREWNQKWIDLSLNSFADIENHLFEAEGYNNAFR
                     FVSAKNAIDSIDSQIDLIEEDIASIRHGLMELKEQEEKNSGRVKHALNLFDSLQEAVR
                     ENPDSYGETLPELEKQLKNIEVEFSEFVMLNSSGDPIEASEILDKAEEHMIALNQIMD
                     RIPSLIKRVTKDFPEQLEDLESGYRKLVEQNYLFTEANIESQFQNIRVSIRENTALIV
                     SFDLDAAEAENEGIQAKIDHLYKVFNREIEANKEAVKISKNLPKFLEHVVQNTQLLDE
                     ESQRLNATYLLADSKLSRINQLKARLESIEIVVTESVEDIENPQVAYSILKERLDHSL
                     ASLKEIEEEQLVLADYLKSQELSENTARKKSTLYINKLHTLKRYMEKRNLPGIPAEFL
                     TNFFRTSDHVEALIAELDYKRINIEVVNRLLENATYDMNQLEELAYLIVQNATLTEQL
                     LQYSNRYRSFDESVQKAFNRSLSIFEKDFDYQAAFEEISFALETVEPGVTERFVRSYE
                     KTREAIRY"
     gene            complement(3948..5900)
                     /gene="gyrB"
                     /locus_tag="U1021_001734"
     CDS             complement(3948..5900)
                     /gene="gyrB"
                     /locus_tag="U1021_001734"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015604652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEM4712248.1"
                     /translation="MTEEIKDLQEKAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEG
                     LHHLVWEIVDNSIDEALAGFADKIEVYIEPDNSITVIDNGRGIPVDIQEKTGRPAVET
                     VFTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSTQLDVHVYKNGQVYFQEYKRGEVV
                     ADLEVVGETDRSGTTVHFTPDPEIFTETTEFDFAKLNKRIQELAFLNRGLNLSITDKR
                     EGVEQTKEYHYEGGIASYVEYLNENKDVIFETPIYTEGEMDDITVEVAMQYTTSYHEN
                     VVSFANNIHTHEGGTHEQGFRTALTRVINDYAKKNKILKENEDNLTGEDVREGLTAVI
                     SVKHPGPQFEGQTKTKLGNSEVVKITNRLFSDAFAEFLLENPQIARRIVEKGILASKA
                     RIAAKRAREVTRKKSGLEISNLPGKLADCSSNDATKTELFIVEGDSAGGSAKSGRDRE
                     FQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGFGADFDVSKARYQKLVIMTD
                     ADVDGAHIRTLLLTLFYRYMRPVVEAGYVYIAQPPIYGIKVGSEIKEYIQPGVNQEQE
                     LQDALERHSTGRSKPTIQRYKGLGEMDDHQLWETTMNPENRLMARVSVDDAAEADKIF
                     DMLMGDKVEPRREFIEENAVYSTLDV"
     gene            complement(6082..6621)
                     /locus_tag="U1021_001735"
     CDS             complement(6082..6621)
                     /locus_tag="U1021_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEM4712249.1"
                     /translation="MTRVAVVLADGFEEIEALAPVDVFRRAHFDCQIVGLDSHEVEGS
                     HGIRVQTDQVFDGDLSSFDLIVLPGGMPGSVHLRDSESLITELQRAVASGKSVAAICA
                     APIVLDKAGLLDSRHYTCFPGKEKDITSGIHLEEDVVVDGPIITSRGAGTSLDFAYKL
                     VDLFGGDGESLAQTMVYHS"
     gene            complement(6635..7864)
                     /locus_tag="U1021_001736"
     CDS             complement(6635..7864)
                     /locus_tag="U1021_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEM4712250.1"
                     /translation="MRKLMKNRGTIDSRVDYSLILPVFFLLVVGIISLYIAVSQDYPD
                     NVVQMVGQQIAWIGIGTVAAFLVMFFSTKFLWQITPYLYVLGLGLMVLPLFFYSPDLV
                     ASTGAKNWVTIGGMTLFQPSEFMKIAYIIMLSRVIVTFHKYYPNRKIREDFMLIGYMT
                     LFTIPVLILLALQKDLGTSLVFVAIFSGMLLLSGVSWKILLPTALTGIVLVGGFMLIF
                     ISPGGTTFLHNLGMDTYKINRIAAWLDPFKNAQSTTYQQAQSLVAIGSGGLKGLGFNK
                     TNLLIPVRESDMIFTVIGEDFGFIGGTVLIGLYLLLIYRMLRVTLKSNNRYYTYISTG
                     YIMMLLFHVFENVGAATGLLPLTGIPLPFISQGGSSMVSNLIGIGLVLSMGYQSRLAD
                     EKETNRSRRYRKITIKR"
BASE COUNT         2625 a         1921 c         1478 g         2642 t
ORIGIN      
        1 catgatcttt atcaatgagt gtatccgtag tttcttcaag ctgttgctct actgctgcta
       61 cttgctcctc accaaaagcc gatgtcatga cagccgctcc tgtgacggct gcccccgaag
      121 ctaatatagc tttcaggtac tggtaacgtt gactttctaa tcgttctgaa ctatctacaa
      181 gaggtactga aactgtttcc tgtccttttc ctcgaataac acgcaaaaga ctgagctgag
      241 acatgacagt ccgaatccag tttttacctg atttatgcat tttaacacga ctcttacgtc
      301 cgacttcatc aaaatctttg ttaaatcgtt tatgtttcat gttgactcct agtatataaa
      361 tttaattcct aaaaatatat actacatatc ctacgcaagt tacaaagaga gccataaaaa
      421 aacattgcat atatatatat atatatatcg taggtagaat gaattcattc taccataatt
      481 gatagaacat ttcaagcaaa ttaatttttg cttcttagaa gctatattca caagtgaagt
      541 gcttgtatat aagaaatatg gtgatttcaa ttagaaaaag gacaatcttg agttatgctg
      601 tcagtaaccc gctcccacaa taactttagg gttctcaaat tgataaaatt aggtgcatcc
      661 tattcctaat tcaatttact atattagtat agcacgctcc tattcagctt tcaataaatc
      721 ttttctgttt ttcatcgtct gtgttatact gaaagaaagg agataagtat gtatcaaact
      781 atattatttg acttagatgg aactcttact gattctggac aaggaatctt aaactccgtc
      841 gcctacgcac tagaaaaaat gggaattgaa gaaccagata caaccaattt aaaccgattc
      901 atcggccccc actctatgaa tctttttcac gattctacca actcagccct gaagatacac
      961 aaagtgcagt tgatactttc cgtgtctatt ttaaagaaaa aggaatgttt gaaaatcaac
     1021 tctatcctgg aatcatccct ctgcttgaag aattgaaaac ggctggaaaa acactagtaa
     1081 ttgctacctc aaagccagaa atatttgcca aacagattct agaacatttt ggtatcgctc
     1141 actactttgt tgtcattgcc ggtgctagtc tggatagtag tcgcatcagt aaggcggacg
     1201 tcatcggcta tgctataatc aattagaagc atttccaaaa catgctgtga tgattggaga
     1261 tagggaacat gacattgaag gagcacgcag gcaccaactt cccgccatcg gtgttcttta
     1321 cggctatggg aacaaacagg aatttgaaaa ggctggggcc accatgatag tcgaaaccat
     1381 ccaagatttg aaaaggattt tactgacaac agaatagaag aaaagccagc actcagctga
     1441 cttctcatta tttactatct aaaatctcta ttagtttata gagatttttt tcatttattt
     1501 ggtagggcgc ctgttcttgg acaatcggtt tagcacagaa agctactcca attcctgctc
     1561 gttgaatcat tggtagatca tttgctccat cccccatggc aatcgtttga gatagactca
     1621 gcccattttc tgccgcccat tcttctaaac atgctttttt agtatcttgc gttacaattt
     1681 cccccaacac ttgtccagtc aatactccat ctactacttc taatcgatta gcccgaacat
     1741 agtctaactc taactgtgca gctagtcgat cgactgtttc atgaaacccg cctgaaacta
     1801 ctgctacctt atagcctcgc atttttaatt ctgagactaa ttctgctgct ccaggcgtaa
     1861 agtggatttt tttgataatt cgatcaaaca cagaaacagg cagtcccttt aacaacgcca
     1921 cacgttcacg taaggcttcc tcaaaatcca attccccacg catagcacgt tcggtaatta
     1981 ctgcaacttg cgctcctaaa ccggcctctt ctccaagtaa atctattcct tcttccaaaa
     2041 ttaatgttga atcaacatcc ataactaata atccagttgt catctccgat attcctttca
     2101 aagtataaaa ataaaaagcc aaatggcttt ttatctagta gcgaatggct tcgcgagttt
     2161 tttcgtatga acgtacaaaa cgctctgtta caccaggttc aactgtttcc agagcaaatg
     2221 aaatttcttc aaatgctgct tggtaatcaa aatccttttc aaaaattgat aatgaacggt
     2281 tgaatgcttt ttgcacactt tcatcgaatg aacgataacg gttagagtat tgtagcaact
     2341 gctctgttaa agtcgcattt tgcacaatca aatacgccaa ctcttccaat tgattcatat
     2401 catacgttgc attttccaac aaacggttaa caacttcgat attgattcgt ttatagtcta
     2461 actcggcaat caaggcttcc acatgatcgc tcgttctaaa gaagtttgtt aaaaattcag
     2521 ctggaattcc tggaaggttg cgtttttcca tataacgctt aagggtatgc aatttgttga
     2581 tataaagtgt agatttctta cgcgctgtgt tctctgacaa ttcttgtgat ttcagatagt
     2641 cagctaaaac aagctgctcc tcttcgattt ctttcaaact tgccaatgaa tgatccaaac
     2701 gctctttcaa aatagaatat gcaacttgtg gattttcaat gtcttccaca ctttctgtaa
     2761 caacaatttc aatcgattcc aaacgagctt taagctgatt gatacgtgaa agtttgctat
     2821 ctgccagcaa gtaagttgcg tttaggcgtt ggctttcctc atccaagagc tgtgtatttt
     2881 ggacaacatg ctccaagaat tttggcaagt ttttactaat cttaacagct tccttatttg
     2941 cttcgatttc acgattgaag actttataca aatgatcaat ttttgcttga attccctcat
     3001 tttcagcttc tgcggcatcc aaatcaaagg aaacaatcaa agcagtattt tcacgaattg
     3061 aaacgcgaat attttggaac tgtgactcga tgttagcttc tgtgaacaaa taattctgct
     3121 caaccagttt acgataaccc gactccaaat cttccaattg ctctgggaaa tcttttgtaa
     3181 ctcgtttaat caaacttgga atgcgatcca tgatttgatt gagagcaatc atatgctctt
     3241 cagccttatc aaggatttca gaagcttcaa tcgggtcacc tgaggaattg agcatcacaa
     3301 attcagaaaa ctcaacttca atatttttca attgtttctc aagttctggt aacgtctcac
     3361 cgtagctatc tggattttca cgaacagctt cctgcaaact atcgaacaag tttaacgcat
     3421 gttttacgcg accagagttt ttctcttctt gctccttcaa ctccatcaaa ccatgacgga
     3481 tagaggcgat gtcttcttca attaaatcaa tttggctgtc gatactgtcg atagcattct
     3541 ttgcactcac aaagcgaaag gcattgttat aaccttctgc ctcaaagaga tgattttcaa
     3601 tgtcggcaaa tgaattgagc gacaaatcaa tccatttttg attccattca cggaatgaca
     3661 cctgactttg accaatcaaa tgaagtgctt tgacagcttc gacttcttca ttaactggaa
     3721 ggttaaatag ctcttcctta cgttcttcca atgcaaccaa aaggttgtca tttcgtttac
     3781 gaacaatcag gcaagctaca taggcaatga ttaaaataat aacaatcgaa acgattaaga
     3841 tgattgttcc tgtaggcatg taaatctcct tagctcatag taattactag aaaatatcgc
     3901 ttaattatac cataaatctc tagtatatgc acttgttttt ttagttttta gacatccaat
     3961 gttgaataaa cagcattttc ctcgataaac tctcgacgag gttcaacctt atcccccatt
     4021 agcatgtcaa aaatcttatc ggcttctgcc gcatcatcaa ctgaaacgcg tgccatgaga
     4081 cgattttcag gattcatcgt agtttcccac aactgatgat catccatttc tcccaaacct
     4141 ttgtaacgtt gaatcgttgg cttggaccgt cccgtactat gtctttctaa ggcatcttgc
     4201 aattcttgct cttgattaac cccaggttga atatattctt ttatctcact tccaaccttg
     4261 ataccgtaaa taggtggttg agcgatatat acgtatcccg cttctacaac aggacgcatg
     4321 tagcggtaaa ataatgtcag aaggagtgtc cgaatatggg caccatcgac atcggcatct
     4381 gtcataatga ctaatttttg ataacgtgcc ttgctaacgt cgaaatcagc accaaagcca
     4441 gttcccatag ctgtaaatag actacggatt tcttcgttgg ccaaaatctt gtccatgctg
     4501 gctttttcta cgttcaaaat cttaccacga atcggtaaaa tagcctgaaa ttcacggtcg
     4561 cgaccggatt tagctgaacc accggctgag tccccctcaa cgatgaaaag ctctgtcttc
     4621 gttgcatcat ttgaggaaca atccgctaac ttacctggga gatttgaaat ctcaagaccc
     4681 gatttcttac gagttacctc acgcgcacgc ttagcagcaa tacgcgcctt gcttgccaag
     4741 atcccttttt caacaatccg tctagcaatc tggggattct ccaaaagaaa ttctgcaaag
     4801 gcatcagaga aaaggcgatt ggtaattttg accacttcac tattcccaag ttttgtctta
     4861 gtttgtccct caaattgagg acctgggtgc ttaacagaaa tgaccgctgt caagccttca
     4921 cgcacatcct caccagtcaa attatcctca ttttctttga gaattttatt tttcttggcg
     4981 tagtcgttga taacacgtgt cagagctgta cggaatcctt gctcatgggt accaccttca
     5041 tgtgtgtgaa tattgttggc gaaactaact acgttttcat gataactcgt cgtatattgc
     5101 atggcaacct caacggtaat atcatccatc tccccttctg tatagatagg ggtctcaaaa
     5161 atgacatcct tgttctcatt aagatactca acgtaggaag caataccacc ttcatagtga
     5221 tattcctttg tttgctctac tccctcacgt ttgtccgtaa tagagagatt taaaccacga
     5281 tttaggaagg ccaattcttg gatccgctta tttaattttg caaagtcgaa ctcagtcgtc
     5341 tcagtaaaaa tttctgggtc aggtgtaaaa tgtacagttg taccagaacg gtctgtttct
     5401 ccaacaacct ccaaatctgc aacgacttca cctcgtttat actcttggaa atagacctga
     5461 ccatttttgt agacatggac gtctagctga gtagataggg cgtttacgac tgatgaacct
     5521 acgccgtgca atccccctga gaccttataa ccgcctccgc caaatttacc acctgcatgg
     5581 agcactgtaa agacagtttc taccgctgga cgaccagttt tttcctgaat atctaccgga
     5641 atcccacgtc cattatcaat aaccgtgatg gagttatctg gctcaatata aacttcaatt
     5701 ttatccgcaa aaccagccag cgcctcatcg attgagttgt cgacaatttc ccaaaccaag
     5761 tgatggagac cttctttaga tgttgagccg atatacatcc ctggacgcat tcgaacagct
     5821 tcaagacctt ccaagacttg aatctgactg gcatcatatt cttgagcctt ctcttgtaaa
     5881 tctttgattt cttctgtcat ttcttttcct tattttctat ttgttgctcc ttaaaaatag
     5941 aaaagccaat ccatcttgat aaaagcgaaa catattttta gagcaaaaat cattctaacg
     6001 aatacccttt attataccat attttctaat attttgatag aaaaaagaag aggaaacatt
     6061 agctccatct tcttcattac tttaactatg ataaaccatt gtttgagcta ggctttctcc
     6121 atctccacca aataaatcaa ccaatttata ggcgaaatcc aaacttgttc cagcacctcg
     6181 gctagtgata attggaccat caacgaccac atcctcttcc agatgaatac ctgacgtaat
     6241 gtctttttct ttccctggga aacatgtata gtgacgacta tctaacaaac cggccttatc
     6301 cagaacaatc ggagccgcac agattgctgc tactgatttt cctgatgcaa ccgctctttg
     6361 caattccgta atcagggact ctgaatctct aaggtgaaca gaacctggca ttcctcctgg
     6421 taaaacaatc agatcaaagg aagacaggtc tccatcaaag acttggtcag tttgaacacg
     6481 aataccgtgc gatccctcca cttcatgact atctaaacca acaatctgac agtcgaaatg
     6541 agctcgacga aatacatcta caggggccaa tgcttcgatt tcttcaaaac catcggctaa
     6601 aacaaccgca actcttgtca tataaaccaa ctttctaacg ttttatcgta atttttctat
     6661 agcgacgtga tcgatttgtt tccttctcat cagctagtcg tgactgatac cccattgaca
     6721 gcactagacc aataccaatc agatttgaaa ccatggacga accaccttgg gagataaacg
     6781 gcaaaggaat acctgttaaa ggcaacaaac ccgttgcagc gccaacattt tcaaacacat
     6841 ggaacaagag catcatgata tagccagttg atatgtaggt gtagtatcga ttgtttgact
     6901 tcaacgttac ccgcagcatt cgataaatga gcaacaagta tagtccaatc aataccgtcc
     6961 caccaataaa accaaagtcc tctccaatca ccgtaaaaat catatcactt tctcgaaccg
     7021 gtataagaag atttgtttta ttgaaaccta gtccttttaa gccaccactt ccgatagcta
     7081 ccaaactttg agcttgctgg taggtcgttg attgggcatt tttaaaggga tcaagccagg
     7141 ctgcaatacg attgatttta taagtatcca tccccaaatt gtggaggaat gtcgttccac
     7201 caggagaaat aaaaatcagc ataaatccac caaccaaaac gatccccgtt aaggcagtcg
     7261 gtaatagaat tttccaagaa actcctgata atagaagcat tccgctaaag attgctacaa
     7321 atactaagga agttcctaaa tctttctgta aggccaacaa aatcaagact gggatagtaa
     7381 acagtgtcat ataaccaatc aacataaaat cctcacgaat ttttcgattt ggataatatt
     7441 tatgaaaggt gacaatcacc cttgacaaca taatgatgta ggctattttc ataaattcgg
     7501 atggttgaaa aagagtcatt ccaccaatcg ttacccagtt ttttgctccc gttgacgcta
     7561 ctaagtctgg actgtagaaa aacaaaggca ataccataag tcctagccca agtacgtaca
     7621 agtaaggtgt gatttgccac agaaacttag tggaaaagaa catgaccaaa aaagctgcca
     7681 ctgttccaat tcctatccaa gcaatttgtt gaccaaccat ctgtacaaca ttatctggat
     7741 aatcttgact aaccgcaatg tagagagaaa taatccccac aactaataaa aaaaagaccg
     7801 gtaaaataag cgagtagtct actcgactat cgattgttcc cctatttttc atcaatttcc
     7861 tcatactttc acttcaaatt cttactcgtt ccattatagc agaaatcatc tctcattgaa
     7921 actaaaaatc tagttacatc agtggggata cgatttatac tcaacgaaaa tcaaaagtag
     7981 cctaggaaag aagtcgaaga tagaactggg gttcatcgag gctcttgaca acggataatt
     8041 ttgattttcg aagagtatta ctagtgcaca aatcataaaa tacgtatcaa ggctttcagc
     8101 tattctttaa ataattacta tattaagtat agaaaaggct acttgtaatt ctgtttgtgt
     8161 ctgcgtattg tcgtaagctg cctgtgtggt atgccagcca atagttaagg gcttttttag
     8221 ttttatcata acaaaaaggt aggatataag tttattctgc cttttattgt tattctacga
     8281 tgttacggaa aaacgccaac cccagcaggt cggcgcgtgg aaatatacaa attgattgac
     8341 atataaccta taatgggggt ataatcatgg tgtaaagaat tgttgtgagg acaattctag
     8401 cactaaatca aaaaagcccc caacgtgcca gcgttgaggg tttttgtttg cccctgtttg
     8461 gggttagtcg tcgttatcgt ctaaataata cttaactact tcagtcaaga tattaaccaa
     8521 taacggcgct agaatacttg tgaggataag tctagcaact aaatcacctc ccttcagtaa
     8581 attcaagggg ggcttgtata tcttatcaga taatttattt tgttgtcaaa ttctccccgc
     8641 ttacacatgg taacatgtaa gcaacc
//
LOCUS       DASFQD010000098         8635 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.099, whole genome shotgun sequence.
ACCESSION   DASFQD010000098 DASFQD010000000
VERSION     DASFQD010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 8635)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8635)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8635
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.099"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(337..624)
                     /locus_tag="U1021_001737"
     CDS             complement(337..624)
                     /locus_tag="U1021_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1905 domain-containing protein"
                     /protein_id="HEM4712251.1"
                     /translation="MSKVYEFEATIHSVPDKGGAYVIFPYDIREEFGKGRVKVHATFD
                     EHPYDGSIVNMGVKDEAGNICYIIGVQKAIRVAIGKQAGDRVQVTIQERME"
     gene            complement(633..1286)
                     /locus_tag="U1021_001738"
     CDS             complement(633..1286)
                     /locus_tag="U1021_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009754918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HEM4712252.1"
                     /translation="MDIVELEKRLLALAEKEQAQPMKAYMKNNFEFLGVRTPDRRKVA
                     KQFFKDFKAQGINWDFVEACWASPYREFQYIAIDYLVTKKKDLVLADLPRLKKLAQTK
                     SWWDSIDGLDKLVGKIVMDNPEAKQTILEWSLDDDFWLRRIAIDHQLLQKEKTDTELL
                     EKIIINNLNQTEFFINKAIGWSLRDYSKTNPDWVRDFLDKYSSQMAGLSIREASKYI"
     gene            complement(1288..1785)
                     /locus_tag="U1021_001739"
     CDS             complement(1288..1785)
                     /locus_tag="U1021_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEM4712253.1"
                     /translation="MIDIRSARIEDAADLVAIYAPYVEKTAITFETEVPTVEAFASRI
                     EKTLEKFPYLVAVEEGKIVGYAYASTYYARAAYDWTVEFSVYVQKEARGKGIGNLLYT
                     ALEEELTARGFKNFLACIALPNPASIALHEKKGYQQVAHFKKVGYKFGTWHDIVWLQK
                     SLVGD"
     gene            complement(1786..2403)
                     /locus_tag="U1021_001740"
     CDS             complement(1786..2403)
                     /locus_tag="U1021_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5052 family protein"
                     /protein_id="HEM4712254.1"
                     /translation="MKWNKKLALVAVLVTSLVTLSACQSISNWWKNTKEEWIGLEMTV
                     RTYDENSQLIDEMSGRSLSISRNQEFDSVDAEGYSNADSSVLKVTLGNYEIDHVGSSL
                     IAAEEGLEDLYAKYQTTVDIANYDRAIPLVNHMVSSLKNDFTGKAKVVLIRSQNGTPL
                     ATYVGDKVSLYASDAPKTSELLIDGKRLIIYRCDYTIYDRELLEN"
     gene            complement(2572..2869)
                     /locus_tag="U1021_001741"
                     /pseudo
     CDS             complement(2572..2869)
                     /locus_tag="U1021_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018030341.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="STAS-like domain-containing protein"
     gene            complement(2959..4833)
                     /locus_tag="U1021_001742"
     CDS             complement(2959..4833)
                     /locus_tag="U1021_001742"
                     /inference="COORDINATES: protein
                     motif:HMM:NF024700.1,HMM:NF025844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM4712255.1"
                     /translation="MKEKLIEGVKNLVDKVNQISVISYTSNDSVIFESLKSNFNQICS
                     NFMYEIEGSNIDFFYNDEQINVYFEGVYNEINSSLQYSLEHLNSYNFPYSVGDLVTFK
                     SIIDQASSIFENIRYTLLKYENIPLLNELISESQTVILVGKNGVGKSTLIDDLKNDKF
                     HNLFCIPAQKYLYVTDLSNARVDNIDGIHQLFTNSPLKVKTTFSYIGADGDPYKIFSL
                     ILNFVMREHQMSKSDYNSPTKSKLDIIISLFSSIFENISLRTDSMNGTIEAEKFSRYS
                     INSLSDGEKSALFYISCAVLAKENTVFVIDEPETHLNIAICNKLWDLILDYRQDCKFV
                     FVSHNSDFISGRVNPRIVWCKKYVNNTDFDLQPLNNLEVDFSRQLLIELVGSRKPILF
                     CEGTIESIDYQLFNILYSDRYLIKPVGGHFDVVNNVRALNKLTPQGIEGIGVIDRDFH
                     TVEKLEKYKNEKIFSIPVNEIEMLLMHESVVRAVLDDANTDMTFEDVKKALKNKLSSR
                     LDFITGISIKNKLEEILSIENIKNKEDGEVQIKLLIKKLSPIVQEFDTEKEKNQQILD
                     SGDYAKWLSICNLKSEVTIGLMNSFESDYQFRALNKIKKNNDLQQILKDFIALPEIGE
                     "
     gene            complement(4854..5078)
                     /locus_tag="U1021_001743"
     CDS             complement(4854..5078)
                     /locus_tag="U1021_001743"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712256.1"
                     /translation="MSNQSAGTIMKNISQTTLSEICIAIANKEIQKMFSKQVRSLLDV
                     IENNIKQNQELTQLRDWLLPMLMNGQVRVE"
     gene            complement(5341..6117)
                     /locus_tag="U1021_001744"
     CDS             complement(5341..6117)
                     /locus_tag="U1021_001744"
                     /inference="COORDINATES: protein motif:HMM:NF013579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEM4712257.1"
                     /translation="MSEWKKYKLSEIYTMSSGISSSKSQAGQGSPFLSFSTVFNNYFI
                     PENLKDLMLTTKEEQERFSIIEGDVFLTRTSETLDELALSSVALNNYPFATYSGFLKR
                     LRPKNKIKVYPKFIAFYLRSSYFRKTIINHTNMTLRASFNESMFSYLEVYLPDYDEQV
                     RIGDFLYKLNQKITLNNQINEELEAMAKTLYDYWFVQFDFPDENGKPYKSSGGKMVYN
                     DQLKREIPEGWGVSSWGRYVNLEMESTMKNLRQGTRFQKL"
     gene            complement(6110..7726)
                     /locus_tag="U1021_001745"
     CDS             complement(6110..7726)
                     /locus_tag="U1021_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002914305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HEM4712258.1"
                     /translation="MEEHYIVQVQSQVQGLFDDLKAVFTHAGLGGEAGEYKLLTQSFL
                     YKFLNDKFLYEALIVDNRYDYQGLLDLSEEDYNWFLDDIGTKTAHLKPEQLIESLHRQ
                     QNQADFAEIFEQILNQIAIDNNAIFSVHTDGGTDIRLFDQRLITDTISDASKRNEVAA
                     SIINLLARVKFDQQIFSQGFDFFSTLFEYMIKDYNKDGGGKYAEYYTPHSVAKIIAAI
                     LVGNDQPSNVKIYDPSAGSGTLLMNLASQIGTDRTSVYSQDISQKSSNLLRLNLILNG
                     LQHSIHNIVQGNTILNNRHAEKMDYIVSNPPFKLDFSEWRDQVESLPNSSERFFAGVP
                     KIPNKKKESMAIYQLFIQHIIHSLKEDGQAAIVLPTGFITAQSGIDKKIRQHLVDEKM
                     LAGVVSMPSNIFATTGTNVSILFIDKKNKDDVVLIDASNLGTKVKEGKNQKPVLSPDE
                     ENQIIQTFINKEVVEDFSVKVSYEEIKDKNYSLSAGQYFDIKIDYVDISPEEFEEKMQ
                     GYQDRLASLFAQSHELEKEIAEQLRRVRYE"
     gene            complement(7731..>8635)
                     /locus_tag="U1021_001746"
     CDS             complement(7731..>8635)
                     /locus_tag="U1021_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEM4712259.1"
                     /translation="SPEEVQEQLASSNRVLMNYPTDNLEFFGRAIDEVKDRKELIALR
                     KSLETIRQYYNMARLHGYHDIVKQVNMGEIASLLNMLSRRLLTLSLLEKPDSFSSQQL
                     LNLAMSETSFSFTKIKEEELRLAANDLDDIRRRVANGINLRRDEKDPEWVSLYEELQR
                     ILNKHMTQEVEGYSLSTIKETKKAYQSLFDSVEDYKTRMNRLAMNFGGDNMSARAFKH
                     ITQSTVVSDFPAIYQVLKGTKPLIDYQIGLNQGILENEAYLVAQIRQLAREEMMKTEV
                     GKQLKRVDYDKLIRSLMEVYEGEY"
BASE COUNT         2585 a         1774 c         1461 g         2815 t
ORIGIN      
        1 cacctaaaag gtgggcaagg gcatcgtttc cgatgagaat agaaggttca cacaactatt
       61 caaggtccgc tcctgcgttt caattaaatg aagacctccc tagcgtcgaa gggagtggga
      121 aagaactcaa cttgtcaacc aagagttcgt cttcccaccc ccgcacagtt aattaggtca
      181 gatttggagt ataaaatacg aacaaatctg ccaatcaacc actgcgctga gatgttgacg
      241 cgaactctta gaagtgtgct gaaccttaat cccacccact actcggctca tcgcatgaat
      301 ctattctacc ataatctcaa ggatttgcaa gcctgattac tccattcgtt cttgaatggt
      361 tacttgtact ctatcaccag cctgttttcc aatagccact cgaatagcct tttgaacgcc
      421 aataatataa cagatattgc ctgcttcatc cttaactccc atatttacga ttgaaccatc
      481 ataaggatgt tcatcaaaag tcgcatggac ttttactctg cctttgccaa attcctctcg
      541 aatatcataa ggaaagatga cataggctcc tcccttatct ggaacagagt ggatagttgc
      601 ttcaaattca tatactttag acaaaattcc tcctaaatgt acttactggc ttcacgaatg
      661 gatagacctg ccatttgaga actatattta tcaagaaaat cccgcaccca gtcaggattg
      721 gttttggaat aatctcgcaa actccagcca atcgccttgt taatgaaaaa ttcagtttga
      781 ttgagattgt taatgataat tttctcaaga agttctgtat ctgtcttttc tttttgcaag
      841 agttggtggt caatagcaat tcgcctcaac cagaaatcat catcaaggct ccattccaaa
      901 atggtctgct tggcctctgg attgtccatt acaatcttac ccactagctt gtccagtccg
      961 tcaatactat cccaccatga ctttgtctga gcaagctttt tcaaacgggg taggtcggct
     1021 aaaaccaaat cctttttctt tgtcaccaga taatcaatag cgatatactg aaactcacga
     1081 taggggctag cccaacaagc ctctacaaaa tcccagttaa ttccctgagc cttgaaatct
     1141 ttgaaaaact gcttggcaac ttttcggcgg tcaggcgttc gtacacccaa gaattcaaag
     1201 ttgtttttca tataggcttt cattggctgt gcctgctctt tttctgctag ggccaacaat
     1261 cgtttttcca attctacaat atccatttta gtcacctaca agagactttt ggagccagac
     1321 gatatcatgc caagtgccaa atttatatcc aactttttta aaatgagcca cctgctgata
     1381 tcctttcttt tcatgcaagg caatggaagc aggatttggt aaggcaatgc aggctaaaaa
     1441 gtttttgaac ccacgcgcag tcaattcctc ctccaaagca gtgtagagca aattcccaat
     1501 cccttttcca cgtgcttctt tttgaacata gaccgaaaat tctaccgtcc aatcataggc
     1561 tgcacgtgca taataggtcg atgcataggc atatcccact atctttccct cttcgactgc
     1621 gaccagatag ggaaacttct ccaaggtctt ttcaattcga cttgcaaagg cttcgacagt
     1681 cggtacttct gtttcaaagg taatagcggt cttttctaca taaggagcat aaattgccac
     1741 aaggtctgca gcatcctcta tccttgcgga acgaatgtct atcatttagt tctccaataa
     1801 ttctctatca taaattgtat aatcacagcg gtagataatc aaccgcttgc catcaattaa
     1861 gagttcagaa gtcttaggtg catcagatgc ataaagagat actttatcac ctacataagt
     1921 agcaagcggg gttccgtttt gcgaacgaat caaaaccacc tttgccttac ctgtaaaatc
     1981 atttttgaga ctagatacca tatggttaac aagcggaatt gcacgatcgt aatttgcaat
     2041 atctactgtg gtctgatatt tcgcatacaa gtcttccaaa ccttcttctg ctgcaatcaa
     2101 ggatgaaccg acatggtcaa tttcataatt accaagtgtg actttcaaaa cagacgaatc
     2161 cgcattggaa tagccttcgg catccaccga gtcaaattcc tgattccgcg aaatcgaaag
     2221 ggacctacca gacatttcat ctattaactg agaattttca tcgtatgtcc gtaccgtcat
     2281 ctccaaacca atccattctt ccttggtatt tttccaccaa tttgaaatcg actgacaggc
     2341 agacaaggtg actaggctgg ttactaatac agcaacaagt gctaactttt tattccattt
     2401 catataaaac ctccaatggt tgatacctta ttgtaacatg gaagagtcag ggttggataa
     2461 aaatagctat ttttaacgat taggagcttc ataattgtaa gaaaaaaacc acaaaatgcg
     2521 gtttctgtaa cttaagatga ctcagtttgg agtatctaca ctgtctcaat attaggccat
     2581 gctaatacga cttacttcaa aagcaaaacg ctctttaatg agtgaattga tttgcacatt
     2641 tgaatctaca aaagttaaag atttctttat ttcactaaaa agagtaatct tgtaacaaat
     2701 tgataaaagc cgaattaaca aacgaagtgc tgacataaga tatcgaatcg aatgagacag
     2761 caacgaattg accactgtcc aaataatttt ttaatgtctc tagtaaaact aatcttgact
     2821 cattatcaga gtacttacta acaatatctt ttacattgat agttaccatt caaattcctc
     2881 ctcttcttct aggtcatagc gatattcatt agatatatca ataccgtgtg ttcgtcaaat
     2941 tgtaatctaa tagttggatt attccccaat ttctggtaag gcaatgaaat cttttagtat
     3001 ttgttgaaga tcattattct tctttatctt atttaatgct ctgaattgat agtcactttc
     3061 aaaactattc attaaaccaa ttgttacttc actcttcaaa ttacagatag aaagccattt
     3121 agcataatct ccggaatcaa gaatttgttg atttttttct ttttctgtat caaattcttg
     3181 cacaattggg gaaagttttt taataagaag tttaatctga acctccccat cctctttatt
     3241 ctttatattt tcaatagata atatttcctc caatttattt tttattgaaa tacctgttat
     3301 aaaatcaagt ctactagata gtttgttttt caaagccttc ttaacatctt caaaagtcat
     3361 atcagtattg gcatcatcca gtacagctct aacaacggac tcatgcatca ataacatttc
     3421 tatttcattg acaggaatag aaaaaatttt ctcattttta tatttttcca atttttcaac
     3481 agtatgaaaa tcacgatcaa ttactccaat tccctcaatg ccctgtggcg tcaatttatt
     3541 tagtgccctt acattattaa caacatcaaa gtgtcctccg acaggcttta tcaagtaacg
     3601 atctgagtat agaatattga acagttgata gtctatactt tcgatagttc cttcgcaaaa
     3661 taagattggt ttacggctac cgactagttc gatcaatagc tgtctgctaa aatctacctc
     3721 taagttattt aatggttgta aatcaaaatc agtattattt acatattttt tgcaccaaac
     3781 aattcgcgga tttactcgac cggaaataaa atcactattg tgagaaacaa aaacaaactt
     3841 gcaatcctgg cgataatcta aaatcaaatc ccacagtttg ttacaaattg caatgtttaa
     3901 atgggtttct ggctcatcaa tcacaaaaac cgtgttttct tttgcaagaa cggcacatga
     3961 aatgtagaaa agagcacttt tttcgccatc actcagagaa ttgatactat acctgctaaa
     4021 tttctcggct tcaatggttc cattcattga gtccgttcgt aagctaatat tttcaaaaat
     4081 tgatgaaaat aaagaaataa ttatatctaa ttttgatttt gtaggagaat tgtaatctga
     4141 tttagacatt tgatgctctc gcatgacaaa attgagaatt aaactaaaga ttttataggg
     4201 atctccatct gctccgatgt aggaaaaagt tgtttttact tttagggggc tgttagtaaa
     4261 taattgatga atcccatcaa tgttatctac tctcgcattg gacaaatctg taacataaag
     4321 gtatttttga gcaggaatac aaaaaaggtt atgaaattta tcgtttttta aatcatcaat
     4381 aagtgttgat tttccaactc cattcttccc aaccaatata acggtttgtg attcgctaat
     4441 tagttcgttg agcaaaggta tgttttcata tttcaataat gtatatcgaa tattctcgaa
     4501 aatactgctc gcttgatcta ttatcgactt aaatgtaact aaatcaccta cggagtaagg
     4561 gaagttgtaa ctattcaaat gttcaagtga atattgaaga gatgaattaa tttcattata
     4621 aactccttca aagtaaacgt ttatttgttc atcattataa aagaaatcaa tattgctacc
     4681 ttcaatttca tacataaaat tagaacatat ttgattaaaa ttacttttta aactttcgaa
     4741 tattacagaa tcatttgatg tatacgaaat gacgctaatt tgattaacct tatcaactaa
     4801 attctttact ccttcaatca acttctcttt catctattcc tccatcttaa atatcattcc
     4861 accctcacct gtccattcat cagcattggc aagagccaat cacgaagttg ggtcagttct
     4921 tggttttgtt ttatattatt ttcaattaca tctaaaagac ttctgacttg ctttgaaaac
     4981 atcttctgaa tttctttatt agcgatcgca atgcaaattt ctgaaagtgt agtttgagaa
     5041 atatttttca ttatagttcc agcagattga ttagacatta gcatttcaat attcttagat
     5101 gataaaatac ataataaaat agattcaaat tggcaacagt tgcgccaata ataaaacctg
     5161 aataaattgt gttagctgga atatcagaga ctatcctagt cgccccagga attccactgc
     5221 gagttatcag aattgttcta tctgtaacaa ggtaactttc aatacgtctt ctatctaaag
     5281 taattgagtc caaatcataa gtagtaacaa aagtactaga atttgaaatg ttccgtacgt
     5341 ttacaatttt tgaaagcgtg tcccctgtct cagatttttc atagttgatt ccatttctaa
     5401 attcacatat ctcccccaac tgcttactcc ccacccttct gggatttctc gtttgagttg
     5461 gtcgttatag accattttac caccggagga cttatagggc ttgccatttt catcagggaa
     5521 atcaaactgc acaaaccaat aatcataaag ggttttggcc atagcctcca actcttcgtt
     5581 gatttggttg ttcagagtga ttttttggtt aagtttataa aggaaatcac caattctaac
     5641 ttgttcatca taatcaggta gatagacttc taaatatgaa aacattgact cattgaaact
     5701 cgctcttaaa gtcatatttg tatgatttat gatcgttttc ctaaaataag aacttcgtag
     5761 atagaatgca ataaatttcg gatatacttt aatcttattt ttgggtctta atctttttaa
     5821 aaatccacta tatgtagcaa atggataatt attaagagct acggatgata aggctagctc
     5881 atctaaagtt tcactcgttc tagttagaaa aacatctcct tcaattattg aaaatctttc
     5941 ttgttcctct tttgtagtta acattaaatc ttttaaattc tctggaataa agtaattatt
     6001 aaatacagtt gagaatgaaa gaaatggtga accttggcca gcttgagatt ttgacgagga
     6061 aattcccgaa ctcattgtgt atatttctga taatttatat tttttccact cactcatacc
     6121 tcaccctcct cagctgctct gctatttcct tttccaactc atgtgattga gcaaagaggc
     6181 tggctaagcg gtcttggtag ccttgcattt tttcttcaaa ttcttctggg ctaatatcaa
     6241 cgtagtcaat cttgatgtca aagtactgac ctgcactgag ggagtagttc ttatccttaa
     6301 tctcctcata gctaaccttg acagagaagt cttcaacaac ctctttgtta ataaaggttt
     6361 ggatgatttg gttctcttca tcagggctaa ggacaggctt ttggttcttg ccttccttga
     6421 ccttggtccc aagattagaa gcgtcaatca agaccacatc gtccttattc ttcttatcga
     6481 taaagagaat ggacacgttg gttcctgtcg tcgcaaagat attggacggc atggacacaa
     6541 cccctgccaa catcttctca tcgaccaggt gctgacggat tttcttgtca atacctgact
     6601 gagcagtgat aaatcctgtc ggcaagacaa tagctgcctg cccgtcttcc ttaagactat
     6661 ggatgatatg ctggataaag agttggtaga tggccatact ctcttttttc ttgttgggaa
     6721 tctttggcac accagcaaaa aatcgttcac tgctatttgg caggctttct acctgatctc
     6781 gccactcaga aaaatctagt ttgaacggag gattggacac gatataatcc atcttctccg
     6841 catgacgatt gttgagaata gtatttccct gtacaatatt gtgaatggaa tgctgcaagc
     6901 cattgagaat caagttgagt cgcaagagat ttgaagactt ttgtgaaata tcctgactat
     6961 acacactggt acggtcagtt ccaatctgac tggccaggtt catcaagaga gtccccgaac
     7021 cagcagaagg atcatagatt ttgacattac ttggttgatc atttcccacc aaaatggccg
     7081 cgatgatttt ggcaacagag tgaggtgtgt agtattccgc atactttccc ccaccgtctt
     7141 tgttatagtc cttaatcatg tactcaaaca aggtggagaa aaagtcaaag ccctgtgaaa
     7201 aaatctgctg gtcaaactta acacgcgcca agagattgat aatagaagct gccacttcat
     7261 ttcgcttgct ggcatctgaa atcgtatccg taatcaagcg ttgatcaaag aggcgaatat
     7321 ctgttccacc atccgtatgg acagagaaaa tagcattgtt gtcaatagca atctgattga
     7381 gaatctgttc aaagatctca gcaaaatctg cttggttctg ttgacggtgt aagctttcaa
     7441 tcaattgttc aggttttaga tgagcagttt tagtcccaat atcatctaaa aaccagttat
     7501 aatcttcttc agacaagtcc aaaagacctt gatagtcata gcgattgtca acaatcaagg
     7561 cctcatacaa aaacttgtca tttaagaact tgtaaaggaa ggactgggtc agaagtttgt
     7621 actcccccgc ttctcctccg agtcctgcat gggtaaagac ggcttttagg tcatcaaaca
     7681 agccttggac ttgactctgc acctgcacga tataatgttc ttccatttgt ttaatattct
     7741 ccttcataga cttccattag ggaacgaatc aacttatcat aatcgactcg tttgagttgc
     7801 ttccctactt ctgttttcat catttcttca cgggccagtt gcctgatctg cgctaccaaa
     7861 taggcttcgt tttccagaat gccttgatta agaccgattt gataatcaat cagaggtttg
     7921 gtgcctttta gaacctgata aatagctggg aagtcactga caactgttga ttgggtaatg
     7981 tgcttaaagg cacgggcaga catgttatct ccaccaaagt tcatggccaa gcgattcatt
     8041 cttgttttat agtcttctac tgaatcgaat aaactttgat aggctttttt ggtttcttta
     8101 atggttgaga gactatatcc ttctacttcc tgtgtcatgt gcttgtttag gatgcgttga
     8161 agctcttcat aaagacttac ccattctgga tctttttcat ccctccgcaa attgatacca
     8221 ttggccacac ggcgtcggat atcgtccaaa tcattggctg ccagtcgtag ttcctcttcc
     8281 tttatcttgg taaaactaaa gctagtctca gacatggcta gattcaatag ttgctgactg
     8341 gaaaaactat ctggtttttc taacaagctc aaagtcaaga ggcggcggga cagcatattt
     8401 aaaaggctag caatttctcc catattgacc tgtttgacaa tatcgtggta gccatgcaaa
     8461 cgtgccatgt tgtagtactg acgaatggtt tcaagagatt ttcggagggc gattaactct
     8521 ttcctatcct tgacttcatc gatggctctt ccgaaaaatt ctaagttatc tgtcggatag
     8581 ttcattagaa ctcggttaga gctcgctagc tgttcctgga cttcttctgg ggaca
//
LOCUS       DASFQD010000099         8600 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.100, whole genome shotgun sequence.
ACCESSION   DASFQD010000099 DASFQD010000000
VERSION     DASFQD010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 8600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8600
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.100"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            27..278
                     /locus_tag="U1021_001747"
     CDS             27..278
                     /locus_tag="U1021_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HEM4712260.1"
                     /translation="MKQIKNRLKKHMFWIGLISLVLMLVDNVLFCYFNIECSRTLNQI
                     EQTICIILSILVFLGVLNNKPDVKVEDIIKNGMSSKNQQ"
     gene            628..1383
                     /locus_tag="U1021_001748"
     CDS             628..1383
                     /locus_tag="U1021_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEM4712261.1"
                     /translation="MIMKRTILLCLPTILLLAACHQNTNQANTTKNSSTVVSTTSSQS
                     ASITSEQSTSSSTSAETNQEVTSTETQVNFNGYYYSVQGKYGEVIIANKKHPLAADYA
                     PGENPEALAAFQRLIADMQALGFGVSNNYSGFRSYETQASLYQSYVNQEGQAAADRYS
                     ARAGYSEHQTGLAFDLLDTSGNLLEEPNASQWLATNAHLYGFIVRYLPGKESSTGYMA
                     ESWHVRYIGQEATDIYNSGLTLEEYFGVPGGDY"
     gene            1472..1915
                     /locus_tag="U1021_001749"
     CDS             1472..1915
                     /locus_tag="U1021_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM4712262.1"
                     /translation="MLKAMEVYLVTNGNGLEAIEFYKNSLGATVEQGNLFKDFLPDCP
                     AELENYVMNAQFRLNGQRFMLSDNNPEMPYTVGDNITVALITDDAETAQELYSKLSVD
                     ATAINMELQAVPWSPAYGNVTDKFGISWQINAEVEGYGQEYYAEN"
     gene            complement(1938..3548)
                     /locus_tag="U1021_001750"
     CDS             complement(1938..3548)
                     /locus_tag="U1021_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEM4712263.1"
                     /translation="MSKSIIWELVKINILYSNPQLLASVKKKQSKRKDASFSAYKSVL
                     LQQVFMVLSFGLLYSVFFMGVDYSQSIGFFSLQLALFTIIAIVYGFTGFFSVFYDSKD
                     TKLYLALPLKPQEVFLAKILSAQGMVLPFLMPCLSLLLITYWQIGGPLLALASIPSFL
                     ILWILVNLVNLIIMHFVGEVLTKSPRKTLISTILMTGSSLLAFAALMFLQSQQTVSLE
                     SGGFVDFPIIPIFAGFHYLVSHTISLETLLHFGLPLILMFGLIVFAFKTVIPNYFNQV
                     LAIENASTKRTNNAKSAKIPSNLNQALVKHHLSTLKDSNLMVQTMIQPIIMGVALFPS
                     FSRFTENGGLSSVGWDFFGIALLAGFLLGSLFAGSTTFIGVAMSLEKENYHFIRTLPI
                     SFRKFIIQKFWVLAAVQFALPTLLYFALALGFMKVKLILAVFFTVGIIISALLTGQIY
                     YWRDQRLLMLNWQNSNQLFGRGAGQWLIAGSIIGTMFLGAIILVVSIILAGTIGAAYV
                     SSALMTLLFVLSAALQLYIYKAYWQKLK"
     gene            complement(3545..4288)
                     /locus_tag="U1021_001751"
     CDS             complement(3545..4288)
                     /locus_tag="U1021_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712264.1"
                     /translation="MIQFDHITKTYGETIALDDLNLTIESGEIFGLIGHNGAGKTTTI
                     SLLTSIIEASYGTISVDGLNLEENRDEVKKRIAYVPDSPDIFLHLTAFEYWHFMGKVY
                     GVQKDTVDDRIAKLSSLFDMTARQHEPIDSFSHGMRQKTIIIGALIPNPDIWILDEPL
                     TGLDPQASFDLKQMMKEHAQSGHTVLFSTHVLSVAEQLCDRIAILRKGQLIFVGSLDE
                     LKSQYPDKDLETIYLELAGRQQVKAGEEV"
     gene            4529..6313
                     /gene="uvrC"
                     /locus_tag="U1021_001752"
     CDS             4529..6313
                     /gene="uvrC"
                     /locus_tag="U1021_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEM4712265.1"
                     /translation="MNDLIKHKLELLPDSPGCYLHKNKYGKIIYVGKAKNLRNRVRSY
                     FRGAHDTKTEALVSEIADFEFIVTDSNIEALLLEINLIQENKPRYNIMLKDDKSYPFI
                     KITKERHPRLIITRQIKKDGGQYFGPYPDVGAANQTLKLLERLYPFRKCKLPENKYCL
                     YYHLGQCLAHGENLPSLSDYDKMAKEVAQFLTGHDDKIVKEVQDKMKAAAGNLEFEKA
                     AEYRDVLQSISTLRTKQRVMAHDLQNRDVFGYYVDKGWMCVQVFFVRQGKLIERNVNL
                     FPYYNDADEDFLTYIGQFYRDQQHLIPSEVLIPQDIDQEAVEALVDTKVIKPQRGEKK
                     QLINLATKNARVSLEQKFNLLEKNLEKTYGAVENIGQLLGIPTPVRIEAFDNSNIMGT
                     SPVSAMVVFENGVPNKKEYRKYKIKTVEGPDDYASMREVLQRRYSRVLRDDLTPPDLI
                     IIDGGQGQVNVAKQVIEQELGMSIPIAGLQKNDKHQTHELLFGNPLEVVELPRNSQEF
                     FLLHRIQDEVHRFAIEFHRQVRSKNSFSSKLDGIEGLGPKRKQALMKHFKSIGNIQSA
                     SLQEIAEAGVPYKVAELVKENLSSKDEI"
     gene            6370..6498
                     /locus_tag="U1021_001753"
     CDS             6370..6498
                     /locus_tag="U1021_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4044 domain-containing protein"
                     /protein_id="HEM4712266.1"
                     /translation="MAFGEEKHKKTTFEKVTLVIVVVMVVATLAGLILPAINALMN"
     gene            6703..8016
                     /gene="obgE"
                     /locus_tag="U1021_001754"
     CDS             6703..8016
                     /gene="obgE"
                     /locus_tag="U1021_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000061643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEM4712267.1"
                     /translation="MSMFLDTAKIKVKAGKGGDGMVAFRREKYVPNGGPWGGDGGHGG
                     NVVFVVDEGLRTLMDFRYNRRFKADDGEKGMTKGMHGRGAEDLIVRVPQGTTVRDADT
                     GKIITDLVENGQEFVIAHGGRGGRGNIRFATPKNPAPEISENGEPGEERNLELELKVL
                     ADVGLVGFPSVGKSTLLSVITAAKPKIGAYHFTTIVPNLGMVRTKSGESFAVADLPGL
                     IEGASQGVGLGTQFLRHIERTRVILHVLDMSASEGRDPYEDYIAINNELETYNLRLME
                     RPQIIVANKMDMPEAEEHLEEFKKKLAANYDEFEELPQIFPISGIAHQGLENLLEATA
                     ELLEKTPEFLLYDESDFQEEEAYYGFNPDEPEFAISRADDASWMLSGDKLEKLFTMTN
                     FDRDESVMKFARQLRGMGVDEALRARGAKDGDIVRIGKFEFEFVD"
     gene            8390..8554
                     /locus_tag="U1021_001755"
     CDS             8390..8554
                     /locus_tag="U1021_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712268.1"
                     /translation="MGDKPISFKDKDGNFVSAADVWNAEKLEELFNRLNPNRKLRLER
                     ERLAREQEKE"
BASE COUNT         2648 a         1586 c         1967 g         2399 t
ORIGIN      
        1 tttatacatc aaaaaggagt atagatatga aacaaataaa gaatcgtttg aaaaaacata
       61 tgttttggat tggactcatt tcgttggtat tgatgctcgt tgataatgtc ctattttgtt
      121 attttaatat tgaatgtagt cgtaccttaa accaaatcga gcagacgatt tgtatcatcc
      181 ttagtattct tgtattttta ggagtgctaa ataataaacc ggatgtgaag gtagaagaca
      241 tcataaaaaa cggtatgtca tctaaaaatc aacaataatg tttgtttaga aactactgat
      301 gaggtatcaa gttgtactta cagttcagta tctctagcta atactaattt ttcaaaatgc
      361 agtcagtatt tcctaaaaaa ctattttgta tataaatcac tttacttgtg aatacgatta
      421 tttaacatca tatatgtcca ccagtcgaaa ggctggtgtt tcaatttatg gcatgtatgt
      481 tatcgtgaat accactactt gaaggaaaag aatcgagaga aattcaatga acactaaaaa
      541 tatcgatagt agttaaaatc acaagccgtc gttagacgga gttttatgat tgtgctacaa
      601 tagacataat tataagagaa cggggtgatg ataatgaaac gtactattct gttatgcttg
      661 ccgacaatac tgttactagc agcatgtcat caaaatacaa atcaggccaa tactaccaaa
      721 aattcgtcaa cagttgtttc gactacttca agtcagtctg cttcaataac ttcggagcag
      781 tcaacaagca gctctacatc ggcggaaacg aatcaagaag taacaagtac agagactcag
      841 gtaaatttta acggttacta ttatagtgta caaggaaaat atggcgaagt gattatcgca
      901 aataaaaagc atccgcttgc agctgattat gcaccgggcg aaaatcctga agccttagca
      961 gcttttcaac gattaatagc agatatgcag gcgctaggat ttggtgtctc caataactat
     1021 agtggatttc gttcctatga aactcaggca agtctctacc agtcttatgt aaatcaggaa
     1081 ggacaagcag cggcagatag gtattctgca agagctggat atagtgaaca tcagacagga
     1141 ttagcctttg atttattgga tacaagtggt aatttattag aagaacccaa tgcttctcag
     1201 tggttggcta cgaatgcaca tctatatggc tttattgtcc gctatcttcc aggaaaagag
     1261 tctagcacag gctatatggc agaatcctgg catgtgcgat atattggtca agaagcgaca
     1321 gatatttaca attcaggctt gaccttggaa gaatattttg gtgtgccagg tggagactac
     1381 taattttaca tttagtcaga aataagtcga aaaatttgtc cgtataacta actcgtgata
     1441 taataaacca tcataatttt ggaggtccat catgcttaaa gcaatggaag tatacttggt
     1501 tactaatggt aatggtttag aagccatcga gttttataaa aattctcttg gggcaacagt
     1561 tgagcaagga aatctattta aagatttctt accagactgt cctgctgaac tagaaaatta
     1621 cgtgatgaat gcacagtttc gtttgaatgg tcaacggttt atgttgtcag acaacaaccc
     1681 agaaatgcct tatacagtag gtgacaatat tacagttgcg cttatcacag acgatgctga
     1741 gacagcgcag gaactataca gcaagttatc cgtagatgca actgctatca atatggaact
     1801 tcaagcagtt ccttggtctc ctgcctatgg taatgtaaca gacaagtttg gtatctcttg
     1861 gcaaatcaat gctgaagtag aaggctacgg tcaggaatat tacgcagaaa actaaaatag
     1921 attggacaac gtccaatcta ttttagtttt tgccaataag ctttgtagat ataaagttga
     1981 agagcagcag atagaacaaa tagtaaggtc atcaaggctg agcttacata agctgcacca
     2041 atagtgccag ctaatatgat gctgacaact agaataatgg ctccgagaaa cattgttcct
     2101 atgatcgatc cagcaatcaa ccattgaccc gctccgcgac caaataactg gttactattt
     2161 tgccagttga gcatgaggag tcgttggtca cgccagtaat aaatctgacc agttagcagg
     2221 gctgaaatga tgatgccgac tgtaaagaag actgctagaa tgagtttgac tttcatgaaa
     2281 cctagagcca aagcaaagta aagtagagtt ggtagtgcga attgcacggc agccaatacc
     2341 cagaattttt ggataataaa ttttctgaaa cttataggaa gcgttcgaat gaaatgataa
     2401 ttttcctttt ccaatgacat ggccactccg atgaaggttg tagaaccagc aaatagactg
     2461 ccaagcaaga atccagctaa tagagcaata ccaaagaaat cccatccaac tgaacttaga
     2521 ccaccatttt ccgtgaaacg gctaaaactt ggaaaaagcg ccactcccat gatgattggt
     2581 tgtatcatgg tttggaccat gaggttgcta tctttaagag tagataggtg gtgtttcact
     2641 aaagcctgat tgagattgct aggaatcttg gcagacttag cattattggt ccgttttgtc
     2701 gaagcatttt caatcgccaa aacttgatta aagtagttgg gaatgacagt tttaaacgca
     2761 aacacaataa gtccaaacat caaaatgaga ggaagtccaa aatgaaggag tgtttctagt
     2821 gatatagtat ggctgaccag gtaatggaat ccagcaaata tgggtatgat aggaaaatca
     2881 acaaagccac cggattcgag tgaaacggtc tgctgagatt gcaggaacat gagcgcagca
     2941 aaagccagca aggaagaacc tgtcatcagg attgtagaaa tcaatgtttt acgagggctt
     3001 tttgtcagaa cttccccaac aaagtgcatg ataatcagat tgactaaatt aactaaaatc
     3061 cagagaatca aaaaggaagg aatggaagct aaggcgagga gcggaccgcc aatttgccag
     3121 taagtgatta gaagtaaaga cagacacggc atgaggaagg gtaggaccat cccttgtgca
     3181 gagaggattt tagcgaggaa gacttcttgt ggcttcaggg gaagtgctaa atacaacttt
     3241 gtatccttac tatcgtagaa aacggagaag aaacctgtaa aaccgtagac aatggcaata
     3301 atggtaaaga gcgctagttg cagagaaaag aaaccgatgg actgactata atctactccc
     3361 atgaaaaaga cagaatagag aagtccgaaa ctcaaaacca taaatacttg ttgcaagagg
     3421 acacttttat aggctgaaaa ggaggcgtct ttgcgcttac tttgtttctt cttgacggaa
     3481 gctagaagtt gagggttgga ataaagaata ttaatcttta ctagttccca aatgatggat
     3541 ttactcatac ttcctcacct gccttcactt gttggcgccc agctaattcc aaatagatgg
     3601 tctccaaatc tttatctgga tactgtgatt tgagttcatc aagacttcct acgaaaatga
     3661 gttgcccttt tcggagaata gcaatgcggt cacagagttg ttcagccact gaaaggacgt
     3721 gtgtagaaaa tagaacggtg tgaccagatt gagcatgttc tttcatcatt tgttttaggt
     3781 cgaatgaagc ctgaggatcc agtccagtta ggggttcatc caaaatccaa atatcagggt
     3841 tagggatcaa tgcaccaata ataatggttt tctgacgcat accgtgtgaa aaactatcaa
     3901 taggctcatg ctggcgcgct gtcatatcaa atagactaga tagtttagcg atacggtcat
     3961 caactgtatc cttttgtaca ccatagacct tacccataaa gtgccagtat tcaaatgctg
     4021 ttaagtgtag gaagatgtct ggcgaatctg gaacataggc tatccgtttc ttgacttcat
     4081 cgcggttctc ctctaggttt aaaccatcaa cagagatagt tccataactg gcttcgatta
     4141 tcgaagtcaa tagactgatt gtcgttgttt ttcctgcccc attgtgacca attaaaccga
     4201 aaatctcgcc actttcaatt gtcaaattta ggtcatcaag tgcgattgtt tcgccgtatg
     4261 tttttgtgat atggtcaaat tgtatcatag taacctcctt gttattcgtg aactaaaagt
     4321 aggggcttgc taagtagtcc aagccgtatt ccaaatgttc ttcgaataat atatacaatt
     4381 aattacattt attatactgc ttaattagta caaaagcaat agtttctatc aatatttttg
     4441 tagtatggat gtggatatat tccaagaagt cgagtataaa aaggaatgca ataagctcga
     4501 ttatcagaaa atttgctata atagacctat gaacgatttg atcaagcaca agttggagtt
     4561 gctgccggac agtcctggct gttacctcca taaaaacaag tacggtaaga ttatctatgt
     4621 gggcaaggct aaaaacctgc gtaatcgggt gcggtcttat tttcgtggtg cccatgatac
     4681 caagacagag gccttagtgt cagagattgc ggactttgaa tttatcgtaa cggattctaa
     4741 tatcgaggcg ctcttgttgg aaatcaatct gatccaggag aacaagcctc gctataacat
     4801 catgctcaag gatgacaagt cctatccctt tatcaagatt accaaggaac gtcatccgcg
     4861 actaattatt acacggcaga ttaagaagga tggtggtcag tattttggtc cctatccaga
     4921 tgtgggtgcg gccaaccaga ccctcaaact attggagcgc ctctatcctt tccgcaagtg
     4981 taaattgcct gagaacaagt attgtcttta ctaccatttg ggacaatgtt tggctcatgg
     5041 ggaaaacctg cccagtctgt ctgactatga caagatggcc aaggaagtgg cccagttctt
     5101 gacgggtcat gatgataaga ttgtcaagga agtgcaggac aagatgaagg cggctgctgg
     5161 caatttggaa tttgaaaagg ctgcggaata tcgtgatgtc cttcaatcca tttcaaccct
     5221 acggaccaag caacgagtga tggctcatga cttgcaaaac cgcgatgtct ttggttatta
     5281 tgtagacaag ggctggatgt gtgtgcaggt tttctttgtt cggcagggga aactgattga
     5341 gcggaatgtc aatctttttc catattataa tgatgcggac gaagactttt tgacctacat
     5401 cggtcagttt tacagggacc agcaacattt gattccctct gaggtcttga taccgcagga
     5461 tattgaccaa gaagccgtag aagctctggt agataccaag gtcatcaagc ctcagcgtgg
     5521 cgagaagaag caactcatca atctggcaac caagaatgcg cgtgttagtc tggagcagaa
     5581 gtttaatctc ctggagaaaa atctggagaa gacttacggt gcagtggaga atatcggtca
     5641 gttgctgggg attccgacgc ctgtgcggat tgaggccttt gacaactcca acatcatggg
     5701 caccagccct gtgtcggcta tggtggtctt tgaaaatggg gtgcctaata aaaaagaata
     5761 ccgcaagtac aagattaaga cggttgaggg gccagatgat tatgcctcta tgcgtgaagt
     5821 gctgcaacgc cgttatagtc gggtcttgag ggacgatttg acaccgcctg atttgattat
     5881 cattgacgga ggtcaggggc aggtcaatgt cgccaagcag gtcatcgagc aggagttggg
     5941 tatgtccatt cccattgcag gtttgcagaa gaatgacaag caccagaccc acgaattgct
     6001 ctttggcaat ccgctggaag tggtggagtt gccacgtaat tctcaggaat ttttcctcct
     6061 gcatcggatt caagatgagg ttcaccgctt tgctattgaa tttcatcgtc aggttcggtc
     6121 aaaaaattcc ttctcatcta aattggacgg catagaaggt ttgggaccaa aacgcaaaca
     6181 ggctttgatg aagcatttca agtctattgg caatatccag tcggccagtc tacaagaaat
     6241 cgcagaagca ggtgtgccgt ataaggtggc ggagttggtc aaggaaaacc tttcttcaaa
     6301 ggatgagatt tgaaaacatt cccataatgt gttagaataa actatcaatg actaaataag
     6361 gagaaagcaa tggcttttgg tgaagaaaaa cacaaaaaaa caacatttga gaaagtgact
     6421 ttagtaatcg ttgtcgtgat ggttgtcgcg acattggctg gcttgatttt accagctatt
     6481 aatgcattga tgaattaaga acctgtattt acagttcggc acttttatct aaggttggtt
     6541 tttaagctgt tcatcgttag ttttttcaaa atacagtcag tattctctca aagaacgacc
     6601 ttgattagct aaaaaacttc tcttatatat aagcacttcg cttgtgaata gaggtctaaa
     6661 acgcttttaa gcgttttttt ctaggaaaga atagggtaaa ttatgagtat gtttttagat
     6721 accgccaaga ttaaggtcaa ggcaggtaag ggaggcgatg ggatggttgc cttccgtcgt
     6781 gaaaagtatg taccaaacgg cggtccttgg ggcggtgatg gtggtcatgg tggaaatgtt
     6841 gtcttcgttg tagatgaagg cttgcggacc ttgatggact tccgttacaa tcgtcgcttt
     6901 aaggctgatg atggtgaaaa agggatgacc aaaggtatgc acggtcgagg agcggaagat
     6961 ttaattgttc gtgtaccgca gggaacaact gtgcgtgatg ctgatacggg taaaattatt
     7021 acagacttgg ttgaaaatgg tcaagaattt gtcattgctc acggtggtcg tggtggtcgt
     7081 ggaaatattc gttttgcgac acctaagaat ccagcgcctg agatttctga aaatggagaa
     7141 ccaggtgagg agcggaacct tgaattggaa ttaaaagtac tagctgacgt tggtcttgtt
     7201 ggttttccgt cagttggaaa atcaacgctt ctcagtgtta ttacagcagc taaacctaaa
     7261 attggtgcct accattttac aaccattgtg ccaaatttgg gaatggttcg gaccaaatct
     7321 ggcgagtcat ttgcagtggc tgatttgcct ggcttgattg aaggtgctag tcaaggtgtt
     7381 ggattgggaa cgcaattcct acgtcatatt gagcggacac gtgttatctt gcatgttttg
     7441 gacatgtcag caagtgaagg ccgtgatcct tatgaggact atatagccat caacaatgaa
     7501 ttggaaacct ataatcttcg tttaatggag cgccctcaga ttatcgtcgc caacaagatg
     7561 gacatgccag aggcagagga acatttggaa gagttcaaga aaaaattggc agccaactat
     7621 gatgagtttg aagaattgcc acagattttc ccaatttctg gtattgctca ccaaggtctg
     7681 gaaaatctac tagaagccac agccgagttg cttgagaaaa cgccagaatt cttgctctac
     7741 gacgaatcag atttccaaga agaagaggct tactatggct ttaatccaga tgaaccagaa
     7801 tttgcaatca gtcgtgcaga cgatgcaagt tggatgctat ctggtgacaa gctggaaaag
     7861 ctcttcacca tgaccaactt cgatcgcgac gaatctgtca tgaaatttgc tcgtcagtta
     7921 cgtggaatgg gtgtcgatga agccctccgt gcgcgtggtg ccaaagacgg cgatatcgtc
     7981 cgtattggca agttcgaatt tgagtttgtt gattaacgta gcagtttgac tgcaagttaa
     8041 cttgctagtc aaactacgcc aagtcctagg gggaccttgg ctagctacct tactaacttc
     8101 acccaaatgg tagtatcgac catttgggtt ccatgtcgta acgttggaaa cacacttaaa
     8161 tcctaaagga cttgatgtga tacggtagcc gctatggcgg actacctacc aaccttacta
     8221 attccgcaca ggcagtggta tcgactgcct gtactccata tcgtaacctg tccggtaagt
     8281 tagtctagta tgaacttaga aattcgagag cagactatag ctttacaaat tttgttcagt
     8341 tggtgacagt cgtttgtgag caatcgaaaa aaaatagttg gaggtctgta tgggtgataa
     8401 gccaatatcc ttcaaggata aagatggaaa ttttgtttca gcagccgatg tttggaatgc
     8461 tgaaaaatta gaagaactct ttaacaggct caatcccaat cgcaaactcc gtttggaacg
     8521 tgagcgtttg gcaagagagc aagaaaagga ataacgtcaa aatctgcttg ttgtatcaga
     8581 aaacaggcag atttttttaa
//
LOCUS       DASFQD010000100         8390 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.101, whole genome shotgun sequence.
ACCESSION   DASFQD010000100 DASFQD010000000
VERSION     DASFQD010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 8390)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8390)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8390
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.101"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            82..552
                     /locus_tag="U1021_001756"
     CDS             82..552
                     /locus_tag="U1021_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HEM4712269.1"
                     /translation="MKLQNLQVGQSYLVKDCLTQDDIRKHLAHLGLKVGEEIRIISKT
                     KTNAIFQVKASRLALDREIIESLVLIEKSATEIINLSEAPIGSSAKVMDIYATGALRR
                     RLMDMGLTKNIQLFLKKVAPLGDPIEITLRGYELTLRKSEAQMIGVQITSEVGK"
     gene            549..2693
                     /gene="feoB"
                     /locus_tag="U1021_001757"
     CDS             549..2693
                     /gene="feoB"
                     /locus_tag="U1021_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HEM4712270.1"
                     /translation="MTKHIALAGNPNSGKTTLFNLLTGTNQRVGNWPGVTVERKSGTI
                     KKRKHLLIQDLPGIYSLSPYTPEERVARDYLIADQPAAILNVLDATNLERNLYLTLQL
                     LEMGLPIVIALNMTDALKSQGRSINSDQLSYQLGVPVQPISALKKLGISQLLHEVEKI
                     TNQQAEPIYPQYDKQFEAGLAQVIDLLSDSIPNHQKRFYAIKLLEQDQVILDQLQLNA
                     QDMLDLTEIIAILEKIYADDMEAIIVNQRYQFIEKITELVTKDSDKAFNLSDNIDRLV
                     TNRFLALPIFAAVMWLTYFLSIQTVGTMGTDWVNDVLFGELVPGLIQANLDRFEIAGW
                     LQSLVLDGIIAGCGAILGFVPQIFVLFVCLGILEDIGYMSRVAFVMDRIFRRFGLSGK
                     SFIPMLISTGCGVPGVMASRTIENEQDRKITIMTATFMPCSAKLPIISLVASAFFPDN
                     PWIAPSAYFVGMAAIVLSGMALKKTKQLGGVASPFIMELPSYHLPKLSTVLRYAFDKA
                     LSFIKRAGTIIFVTNIIIWFSSSYNWSLQMVETDESILASIGHSFSLLFAPLGFGNWR
                     ATVAAITGLLAKETVIATFGILYKLGETTEENPELWGLLQQDYTALSAYSFLVFNLLC
                     APCFAAIGAIHREMGEAKWTWIAIGFQTGLAYASSLVIYQVGLVLIYGQLPTVWTFIA
                     IFLIITAIYSLVKKPANTLPIVTLKTLEKGEY"
     gene            2693..2845
                     /locus_tag="U1021_001758"
     CDS             2693..2845
                     /locus_tag="U1021_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FeoB-associated Cys-rich membrane protein"
                     /protein_id="HEM4712271.1"
                     /translation="MPTLILFLIIVILFSLAIRSLINGKGSCGDCSCDCTIKQEMNES
                     SHHRHP"
     gene            complement(2898..3827)
                     /locus_tag="U1021_001759"
     CDS             complement(2898..3827)
                     /locus_tag="U1021_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4712272.1"
                     /translation="MSNRFFRHFIESLKSLKRNGWMTIAAISSVAITLTLVGLFASVI
                     LNTAKLASDLEQNVRINVYLRANSTDQAETIVNEAGETVANPDYLKVYNQITALENVQ
                     SVTYSSKDEQLQKLTATLGETWNLFQGDANPLYDAYIIDTTDPNYVKSVAAEIAKIDG
                     VTEVRDGEVETERIFKLADLVRTWGLAATGLLLFTAVFLISNTIRITIISRSREIQIM
                     RLVGAKNSYIRGPFLWEGAWVGFLGAILPSVLVYSLYKMIYTSVNASLASQDLSLISM
                     NVFVPGMIGALFVIGIIIGSLGSVISMNRYLKI"
     gene            complement(3820..4512)
                     /gene="ftsE"
                     /locus_tag="U1021_001760"
     CDS             complement(3820..4512)
                     /gene="ftsE"
                     /locus_tag="U1021_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012130521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEM4712273.1"
                     /translation="MGIIEMKDVSKKYGNGTTALRGVSVNVEAGEFTYIVGPSGAGKS
                     TFIKLLYREEKLDKGSLKVGKFDLAKIKKRDVPLLRRSVGVVFQDYKLLPKKTVFENI
                     AYAMEVIGEKPRNIKKRVMEVLDLVGLKHKIRSFPNELSGGEQQRIAIARAIVNNPKV
                     LIADEPTGNLDPENSWEIMNLLERINLQGTTILMATHNSQIVNTLRHRVIAIEDGRVV
                     RDEAEGEYGYDE"
     gene            complement(4654..5749)
                     /gene="prfB"
                     /locus_tag="U1021_001761"
     CDS             complement(join(4654..5676,5678..5749))
                     /gene="prfB"
                     /locus_tag="U1021_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775232.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEM4712274.1"
                     /translation="MDTAEIRQKIEELGKKLTSFRGSLDLEGLEEEIAILENKMTEPD
                     FWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAEDESVRDELVEKLAE
                     LDKTMTAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFTV
                     ETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVE
                     VMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRT
                     QYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDH
                     RTGYEVAQVDKVMDGDLDGFIDAYLKWRIS"
     gene            complement(5784..6911)
                     /gene="queG"
                     /locus_tag="U1021_001762"
     CDS             complement(5784..6911)
                     /gene="queG"
                     /locus_tag="U1021_001762"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEM4712275.1"
                     /translation="MNIKEEIIKLSQEIGISKIGFTTADDFAYLEKSLRASQEEGRSS
                     GFEHKNIEERIRPKLSLESAKTIISIAVAYPRHLPVKPQKTQYKRGKITPSSWGLDYH
                     YILQDKMERLARGIERLTDGLEYKAMVDTGALVDTAVARRAGIGFIGKNGLVISKEFG
                     SYMFLGELVTNLDIEPDQPVDYDCGDCNRCVAACPTSCLLGDTTMNARRCLSFQTQDK
                     GMMDLEFRKKIKTVIYGCDICQICCPYNKGISSPPVVEIDPELAEPELIPFLDLSNGQ
                     FKEKFGMIAGSWRGKNILQRNAIIALANNNDRSAIPKLLEIIDKKQNPVHMATAIWAL
                     GQLVKHPNDEMVSFIAGISSDNDDVIAEQMAFLNMVKDLQM"
     gene            complement(6952..7440)
                     /locus_tag="U1021_001763"
     CDS             complement(6952..7440)
                     /locus_tag="U1021_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEM4712276.1"
                     /translation="MQTKKMSMFLFFAYLLLLTWMIVFKMDLSIVYGRYGYASINLIP
                     FAGTAVYDGVLDFPEILFNIVSFIPFGIYMEMLFRKASWVANLCLIMLVSLCFEVLQY
                     LLLLGVADITDLLANGLGGAIGINIMYVLTSIWREKAYVRMNIFCFVLTFFVILITYL
                     AM"
     gene            complement(7609..8025)
                     /locus_tag="U1021_001764"
     CDS             complement(7609..8025)
                     /locus_tag="U1021_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HEM4712277.1"
                     /translation="MNYLQNYILSKSSYLPSDKLFILQKELEDLDDEALNVLMMVEMR
                     QPLVALILAIFFGEFGVDRFYVGNKELGFAKLIAFAVSFVTLFILIGFLLFLGLYLWK
                     FIDCFLIMRACKEANFERLMLQIHQYKAFQHSNQTF"
     gene            8159..>8390
                     /locus_tag="U1021_001765"
     CDS             8159..>8390
                     /locus_tag="U1021_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712278.1"
                     /translation="MRVIIHYPKPTKQLSSQKLPLLVDGKIAGTVTQGKILSLPITQP
                     SVTLSIRGDKKSSIQVKEGDRVQIVENSKYFIL"
BASE COUNT         2594 a         1958 c         1446 g         2392 t
ORIGIN      
        1 aataagccat tcctaaaaat tgtctgacac ttttaaggaa ttgtgctata ctattgttat
       61 aaaaatcaca aaggaaacga tatgaaactg caaaaccttc aagttggaca atcttattta
      121 gtcaaagatt gtctaacgca agatgatatt cgtaaacact tagcacactt gggtttaaaa
      181 gtcggagaag agattcgcat catttcaaaa accaagacca atgctatttt ccaagtcaag
      241 gcaagccgtc tagccctaga cagagaaatt atcgaatctc tggttttaat agaaaagtca
      301 gctacggaaa taatcaatct atccgaggca cctattggta gctcagctaa ggtcatggat
      361 atctatgcaa caggtgcact ccgtcgtcgc ctcatggata tgggacttac aaagaacata
      421 cagctatttc tcaaaaaagt cgctcccctg ggcgatccaa tcgaaattac cttgagagga
      481 tacgagctga cactacgcaa atccgaagcg caaatgattg gtgttcaaat cacaagcgag
      541 gtggggaaat gacaaaacac atcgcccttg caggaaatcc aaatagcgga aaaacaactc
      601 ttttcaacct cctaacagga accaaccaac gtgtcggtaa ctggcctgga gtcaccgttg
      661 aaagaaaatc tggaacgatc aaaaagcgaa aacatttact aattcaagat ttaccaggta
      721 tctactcgct gtctccctac acaccagaag aacgggttgc cagagattat ttgatagcgg
      781 accaaccagc tgctatcctc aacgtccttg atgcaacaaa cttggagcgg aatctctatc
      841 tgaccttgca gttattagaa atgggcctcc ctattgttat cgccctcaat atgacagacg
      901 ccctgaaaag tcaaggtcgc tcaataaaca gcgaccaact ctcctatcaa ctgggagttc
      961 ctgtacagcc tatcagtgca ctaaaaaagc taggtatatc ccagctcctc catgaagtag
     1021 aaaaaattac caatcaacaa gctgagccaa tctatcctca gtatgacaaa caatttgaag
     1081 ccggtctcgc ccaagttatt gacctattat cggattccat cccaaatcat caaaaacgct
     1141 tctacgccat taagctactc gaacaagacc aagtcattct agaccaattg caactaaatg
     1201 cacaagacat gcttgatttg accgaaatca ttgccatttt ggaaaaaatt tacgcagacg
     1261 atatggaagc cattatcgtc aatcaacgct accaatttat cgagaaaatc acagaactgg
     1321 tcacaaaaga cagcgataag gcttttaacc tgtctgataa catagaccga cttgttacca
     1381 atcgttttct tgccctccct atctttgcgg cagtcatgtg gctgacctac ttcctgtcta
     1441 ttcaaacggt aggtacaatg gggactgact gggtgaatga tgtcctcttc ggagagcttg
     1501 ttccaggcct tattcaggca aatctagatc gatttgaaat cgctggctgg ctacaatctc
     1561 tggtccttga tggcattatt gcaggatgcg gagccattct aggttttgta ccacaaattt
     1621 tcgtcctctt cgtctgcttg ggaatcttgg aagacatcgg ctatatgagc cgagtcgcct
     1681 ttgtcatgga taggattttt agacgttttg gtctatcagg caaatccttt attcccatgt
     1741 tgatttccac aggctgtggc gttcctggag tcatggcaag ccggactatt gaaaatgaac
     1801 aggaccgaaa aatcaccatt atgacagcaa ccttcatgcc ctgttctgcc aaacttccta
     1861 tcatttcact ggtagccagt gctttctttc ctgacaatcc ttggattgct ccaagcgcct
     1921 attttgtcgg tatggctgcc atcgtcctat ccggaatggc actaaaaaag accaagcaac
     1981 ttggtggagt cgcaagcccc tttatcatgg aattaccatc ttatcactta ccaaaactca
     2041 gtacggttct ccggtatgca ttcgataagg cacttagttt tatcaaacga gctggtacca
     2101 ttatatttgt gaccaacatc attatttggt tcagcagttc ctataattgg tctttacaaa
     2161 tggtagaaac agatgagagt atcttagcct ccattggaca cagtttttct ctcctctttg
     2221 ccccacttgg tttcggaaat tggcgagcaa ctgttgcagc cattacaggt ctcttagcca
     2281 aggaaaccgt cattgccacc tttggtatcc tctataaatt aggagaaaca accgaagaaa
     2341 atcccgaact ctgggggctt ttacaacaag actatacagc gttatcagcc tactccttcc
     2401 tagtcttcaa tctcctctgt gcaccttgtt ttgcagctat tggtgccatt caccgtgaaa
     2461 tgggagaagc caagtggaca tggattgcta tcggtttcca aacaggttta gcctatgcaa
     2521 gtagtttggt tatctatcag gttggtcttg tacttatcta cggacaatta ccaaccgtct
     2581 ggacatttat cgctatcttt ctaattatca cagccatcta cagcctagtg aaaaaaccag
     2641 ccaatactct tccaatcgtc acgctaaaaa cattagaaaa aggagaatat taatgcccac
     2701 acttatcctc tttctcatca tcgtcatctt attttctctt gcgattcgca gtctcatcaa
     2761 tggaaaagga tcctgcggag attgttcctg cgactgtact attaagcaag agatgaacga
     2821 atcttctcac catagacatc cataacaaaa aggtctgcct cattattgtg cagacctttt
     2881 tacatgtagc ttgtctatta aatttttaag taacggttca tggaaatgac tgatcccaag
     2941 gaaccaataa taataccaat tacaaaaagt gcgccaatca ttcctggaac aaagacattc
     3001 atactaatca gagacaaatc ttgactagca agactagcat ttactgaagt atagatcatc
     3061 ttataaagag aatagactag aacagaaggt aaaatagctc cgaggaaccc tacccaggca
     3121 ccttcccaga ggaatggtcc acggatataa ctgtttttag caccaaccag acgcataatc
     3181 tgaatttcac ggctacgaga aataatggta attcgaatag tattggaaat caagaagacc
     3241 gcagtaaaga gcaataaacc agtcgctgcc aatccccaag tccggactaa atcagccaac
     3301 ttgaaaatac gctctgtctc tacttcacca tctcgaacct ctgtaacacc atcaatttta
     3361 gcaatctctg cagccacaga tttaacataa tttggatctg ttgtatcaat gatgtaagca
     3421 tcgtaaagtg gattggcatc tccttggaat aagttccaag tttctcccaa ggtagctgtt
     3481 aatttctgca actgttcatc cttacttgaa taagtaacag attgtacatt ttctaaggct
     3541 gtaatctgat tgtacacctt tagataatct ggattagcta ccgtctctcc tgcttcgttc
     3601 acaatcgtct cagcttgatc ggttgagttc gctctcaaat acacattgat gcgtacattc
     3661 tgttccaaat ccgaggcgag ctttgctgtg ttcaaaataa ctgaagcaaa tagaccaacc
     3721 aaggtaaggg taatggctac agatgaaatg gctgcaatcg tcatccaacc atttcgcttc
     3781 aaactcttca atgactcaat aaagtgtcta aaaaatcgat tactcatcgt atccatattc
     3841 tccttccgct tcatcacgta ctacacgacc atcttcaatc gcaataacac gatgacgaag
     3901 tgtatttaca atctgactat tgtgtgtcgc catcaaaatc gttgtcccct gcaaattgat
     3961 tcgctccaat agattcatga tttcccaaga gttttcaggg tccaagttac cagttggctc
     4021 atcagcaatc aatactttag gattatttac aatggcacgg gcaatagcaa tccgctgttg
     4081 ctcaccacct gaaagttcat ttgggaaaga acgaattttg tgcttcaaac caaccaaatc
     4141 taaaacttcc attacacgtt tcttgatatt ccgtggtttc tcaccgataa cttccatcgc
     4201 ataggcaata ttttcaaaga cagtcttttt aggtaagagt ttgtaatctt ggaaaaccac
     4261 tcctacacta cgacgcagaa gaggaacatc tctcttttta atttttgcaa ggtcaaactt
     4321 accaaccttt agactcccct tatcgagctt ttcctcccga tacaagagtt tgataaaggt
     4381 tgacttacct gcaccagaag gacctacaat gtaggtaaat tctcccgctt caacattaac
     4441 tgatactccg cgaagggcag tcgttccgtt tccatatttc ttggaaacgt ctttcatttc
     4501 tattattccc ataggatttc ctgtcttaga cagtcctttc tttagatttg agaacgtttt
     4561 ttcaaaatac agtccgtatt ctttaaaaaa acttccttga tgagcgaaaa actatctctt
     4621 atttacaagc acttcacttg taaatacagg ttcttagcta attcgccatt ttaaataagc
     4681 atctataaag ccgtccaagt ctccgtccat aaccttatcg acttgagcca cctcataacc
     4741 agtacggtgg tcttttacca tagtataagg cgtaaagaca taggaacgaa tctgacttcc
     4801 ccaagtaatt tcttttttat ctcccttgag tgagtctact tctgccgctt tcttctcctg
     4861 ctccaattga tacaatttag cctgcaagag tttcattgca cggtctcggt ttccatactg
     4921 agtacggtca actgtggact gagtaacaat ccctgtcgga atgtgcgtca atcgaacacc
     4981 cgttgagacc ttgttgacgt tctgtccacc agcaccacct gaacggaagg tatccatctt
     5041 cacttcatca tctctgattt caatttcaat ggtatcgtcc aactcaggca ttacctctac
     5101 agatgtaaag gaagtatgac gacgcttagc tgagtcaaaa ggtgagatgc gcaccaaacg
     5161 atgaacaccc atttctgact taagcaagcc ataggcgttt ggaccagtaa agcttagagt
     5221 cacggactta atacctgcct catcaccagc ttgataatcc aaggtttcaa ctgtaaaacc
     5281 tttggcattt ccataacgct gatacatccg caggagcatt tctccccagt cttgtgcctc
     5341 ggtaccaccc gaacctggat ggatttccaa gatagcgtta ttgtgatcat agggttctga
     5401 caagagcaag gtcatttcgt aagcagtcat ggttttgtcc aattccgcta acttttcaac
     5461 caactcatcc cgcacagact catcttctgc tagaaaatcc agcaaaattt cagattcatc
     5521 atataaatcc aacatctgat ggaaatttcc ataagtattt tttaattcat tcaactcctg
     5581 agacgtcttc tgggctgcca aattatcatt ccagaaatct ggctccgtca tcttgttctc
     5641 aagaatggca atctcttctt ccagaccttc taagtcaaag agacccccta aaagaagtta
     5701 attttttgcc aagttcttca atcttttggc gaatttctgc tgtatccata tacacctcat
     5761 ttttattcat aatctttatt atatcacatt tgcaagtcct tgaccatgtt gagaaaggcc
     5821 atttgctctg ctatgacatc atcattgtct gatgaaatac ctgcgataaa ggaaaccatc
     5881 tcatcattgg gatgtttgac caattgcccc aaggcccaga tagccgtcgc catgtggaca
     5941 ggattttgtt tcttatcgat gatttctagg agtttgggaa tggcagagcg gtcattgtta
     6001 ttagctaagg caatgatggc attgcgctgg agaatatttt tcccccgcca agaacctgca
     6061 atcataccaa atttctcctt gaattgtcca tttgacaagt ccaagaatgg aatcagctca
     6121 ggctcagcca attctgggtc aatctccacc acaggtggac tagaaattcc cttgttgtaa
     6181 ggacaacaaa tctggcaaat atcacaacca tatatgaccg tcttgatttt cttacgaaac
     6241 tccaagtcca tcataccctt atcctgggtc tgaaaggaca agcaacgacg ggcattcatg
     6301 gtcgtatcac ctaatagaca agacgtcgga caggctgcaa cacagcgatt acaatcgcca
     6361 caatcataat ctactggttg atctggttcg atgtccaggt tggtcactaa ttctcctaga
     6421 aacatatagg aaccaaattc cttagaaatg actagcccat tcttaccgat aaagccaatt
     6481 cctgctcttc tggcaacagc tgtatccacc aaagctcctg tatctaccat agccttgtat
     6541 tccaaaccat ccgtcagtct ctcaattccc cgtgccaaac gctccatctt atcttgcaag
     6601 atatagtgat aatcaagccc ccatgaacta ggggtaatct tcccacgttt gtattgggtc
     6661 ttctgcggtt taacaggcaa atgtcgagga taagctaccg cgatagaaat gatggttttg
     6721 gcagattcta acgacagttt gggacggata cgttcttcaa tattcttgtg ttcaaatcct
     6781 gacgaacgcc cttcttcctg actagcacga agtgatttct ccaaataagc aaaatcatca
     6841 gccgttgtaa aaccaatctt cgagattccg atttcctgag ataatttaat aatctcttcc
     6901 ttaatattca ttatattcat tttagcaaac tttggatata tttagcaaga cctacatagc
     6961 taaataagtt attaatataa caaaaaacgt tagcacaaaa caaaaaatat tcatccgaac
     7021 ataggccttc tcccgccaaa tactggtcaa gacatacatg atattaatac cgattgctcc
     7081 ccctaagccg ttagccagta aatcagttat atctgcaacc ccaagtaaaa gaagatattg
     7141 cagaacctca aagcagagac tcactaacat aatcaaacat agattagcca cccacgatgc
     7201 cttgcgaaat agcatttcca tataaatacc aaagggaata aaacttacaa tattaaatag
     7261 aatttctgga aaatccagca ctccatcata gaccgctgtt cctgcaaacg gaattaagtt
     7321 tatactagca taaccatagc gtccatatac gatgctcaag tccatcttaa agacaatcat
     7381 ccaagtaagt aaaaggagat aggcaaaaaa taaaaacata ctcattttct ttgtctgcat
     7441 agaaattttc ctctcaacta gcatatttta tcattatatc ataaattctg ttctataaat
     7501 tgtcacttct gtgacaaagc tcattccata ttacaagtac tttacagcct actaaaaaca
     7561 gaaaaggaag acactaccaa gcctcccctt attcccaaaa atatcttatt aaaatgtctg
     7621 attgctatgc tgaaaagcct tatattgatg gatttgtagc atcaaacgct caaagttcgc
     7681 ttccttacat gctcgcatga tcaagaagca atcaataaac ttccacaaat aaagtcccaa
     7741 aaataacaag aacccaatca agataaatag cgtaacaaaa gatactgcaa aagcaatcag
     7801 cttggcaaat cccaattctt tattcccgac ataaaaacgg tcgacaccaa actcaccgaa
     7861 gaaaatagcc aaaataagag cgacaagagg ttgacgcatc tcaaccatca taagaacgtt
     7921 taaagcctca tcatctaaat cttctagttc tttttgcaga atgaataact tatcagatgg
     7981 taaataactg cttttactta aaatataatt ctgaagataa ttcatataaa ctcctacctc
     8041 ttcaaaatta tagcagtttc ttattcttca agcaagcctg taggggaaaa cagtgtcaga
     8101 aatcgtttac atttttttct tttttgctat aatgaaacta gattacaagg aggttcatat
     8161 gagagttatt attcattatc caaaacctac caaacaacta tcctcccaaa aacttccgct
     8221 cctggtagat ggaaaaattg ctgggacagt tactcaaggt aaaattctaa gcttaccaat
     8281 tacacaacca tctgtcacac taagcattcg aggggataaa aaatcaagca ttcaagttaa
     8341 agaaggcgat agggtccaaa tagtggagaa tagcaagtac ttcattctct
//
LOCUS       DASFQD010000101         8003 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.102, whole genome shotgun sequence.
ACCESSION   DASFQD010000101 DASFQD010000000
VERSION     DASFQD010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 8003)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8003)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8003
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.102"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            93..374
                     /locus_tag="U1021_001766"
     CDS             93..374
                     /locus_tag="U1021_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000371962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712279.1"
                     /translation="MDIDQLLELLKLKLGISTTLRDKPLEKILDAVISELSQTFGVEL
                     DSKRADHEMFVVDFAAYRYEGGVDMPRHLQWRLHNLQVSSKGETSDVES"
     gene            361..660
                     /locus_tag="U1021_001767"
     CDS             361..660
                     /locus_tag="U1021_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016356241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head closure protein"
                     /protein_id="HEM4712280.1"
                     /translation="MWNHEITLIANKITGKDKLKQNIIEEVKTVLLCRKKSITRSEFY
                     QANQAGIRPSLVVDIHSFEYDNQELAEFGGKRYRIIKTYPVDIETIELTLTEKLS"
     gene            657..1016
                     /locus_tag="U1021_001768"
     CDS             657..1016
                     /locus_tag="U1021_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000060159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HEM4712281.1"
                     /translation="MSLTGDLANEIAKAMAEYSEEIEDKIDLIAEDVVNEAVNELKAT
                     SPKRHGKYARNWRFKKNAKGSYVIYNAAPTYRLTHLLENSHLLRNGGRSKAQPHIKPV
                     EEKVKENFEKRIKELGR"
     gene            1013..1336
                     /locus_tag="U1021_001769"
     CDS             1013..1336
                     /locus_tag="U1021_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001847815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712282.1"
                     /translation="MKLSEFADILEQAGLPVTYRAYQEGNVPDMPYLVYFESNPIVNS
                     ADNKRNHEIKSVVVELAFERKDEDLEERLEELWSNHELFFEAQEETFIETERLYVKPY
                     TVYLY"
     gene            1349..1924
                     /locus_tag="U1021_001770"
     CDS             1349..1924
                     /locus_tag="U1021_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006150474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM4712283.1"
                     /translation="MENKVTYGLKNVHVAPITNISAETGVLTYGEIFRFPGAMEITLE
                     PKGESGAIQADDIDYHFMNANEGYEGKWKVPHIIDQFATKILGEIKDTETGVLTEKGD
                     AEPTPFALMFEFSGDKNKTRHVLYYCSASRPATGSKTKSGTSVNERELTFNASPRPLD
                     TVVKRSVTSADKKEVYDNWFKQVYEPVAVSR"
     gene            1936..2355
                     /locus_tag="U1021_001771"
     CDS             1936..2355
                     /locus_tag="U1021_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001227145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712284.1"
                     /translation="MRKIIPIGDQEYELATNGYTPIAYKEEFGKDYFQDLFSMLNSQA
                     LLSELDKLEPGQELQASDIDMSVLADFDMTFFNRLFWTFAKSANPRIKPYAQFFMEME
                     EFPVQEIGRDLMEMLNASMQTKKKQTRQNLQAMKSLQ"
     gene            2663..5416
                     /locus_tag="U1021_001772"
     CDS             2663..5416
                     /locus_tag="U1021_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000918321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HEM4712285.1"
                     /translation="MASNIKGIKIEIDGDTQPLQKALKDVNKNATEATKELRQIDKAL
                     KFDTGNVTLLTQKQEVLQQQVSNTKEKLETLRQAQAQVEKQFQNGDIGADQYRAFQRE
                     LETTQNVLKGYENKLENVNRALANNGQAVETNVSQLNNLQSEQSQLASEMDKVTSAFK
                     LQESELGQNASESEKVALAQKKIAAQSEIVEKQISNLEKQLSLTKKEYGENSTEANKM
                     EAELNQAKTALNNLNNEMNETKSAANGAQDGLEGMTKIARAEALQNVSEKLSAVSDKL
                     LEVGTDAMEAAAQVQASNAQFRTVFGDMESQARQSLNAIGDEMDIVPERLQGSFTQMA
                     SFAKTSGMETADALDLTTRATRAAADGAAFYDKSIEEVTENLQSFLKGNYENDAALGI
                     SATETTRNAAANKLYGKSFNELSEAQKQLTLLQMVEDGNALSGALGQAARESDGLENV
                     LGNLKQSGTNALAAIGQPILEMLIPVFQSLADIVNNVATWFTNLSPTIKNIVVIIGML
                     VVAVGTLLPIILAVVSGFQLLMGGLAGLSVGIMPLIGIIAGVIAGIVLLVVAIKELWQ
                     NNEGFRTAVTEIWNAIMSVINTIVQQISDFVMSIWETLSTWWAENQELIRATAETIWN
                     AIQSVIQTVMSILGPLIEASWNNIQLVISTVWEVIKTVVETAINVVLGIITAVMQIIN
                     GNWSGAWETIKGVFSTVWNGIQSIVQTLLSAIQSYIGNVMSGISGTISNIWNAISGTV
                     SNILNGISNTVSNIWNGIKNSISNAINGAKDVVSNAINAIKGFFNFEFKWPHIPLPHF
                     SISGSINPLDWLKGGLPKIGVEWYAKGGILTKPTAFGMNGNNLMVGGEAGNEAILPLN
                     DKTLGAIGRGIAQTMGGSTPTINITITGNVVREEADITKIANQVAQRIADELQRKTQL
                     RGG"
     gene            5419..6141
                     /locus_tag="U1021_001773"
     CDS             5419..6141
                     /locus_tag="U1021_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006150465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM4712286.1"
                     /translation="MIRHNELVIDGVKTSSFPFKVIVHESPSVTLGDSKTNLLEHDGI
                     SGAIVQTNKHRGLIEKSYTIYLVKPTEEQLNKFMSLFIREKFWLENERVKTTRLWCYK
                     ASATDAEQEKPGLYVTKVTFTCHPTKFFKGTDSQTLTGNGVLKVQGSALAFPKITVVG
                     QSASETSFTIGNQVIKLEKLSESLVMVNDPDNPSFKTASGKLIKWAGDFITVDTAKGQ
                     NVGVVLGPGIQSLKFETVWGWA"
     gene            6142..7323
                     /locus_tag="U1021_001774"
                     /pseudo
     CDS             6142..7323
                     /locus_tag="U1021_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001918212.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
BASE COUNT         2483 a         1576 c         1926 g         2018 t
ORIGIN      
        1 gaacctgaac ttccagaggg cgacaagcct gctgatgaat cagtagagaa accaaagcgg
       61 aagcgtacca ctaagaaagc agaggaatag tcatggacat tgatcagcta ttagaactgc
      121 ttaaactgaa gctaggcatt tcaaccactc tcagggataa gccgttggag aaaattcttg
      181 atgccgtcat ttctgaatta tcacagactt tcggtgttga attggattct aaaagagctg
      241 atcatgagat gtttgtggtt gatttcgctg cttatcgcta tgaaggtggt gtggacatgc
      301 cgcgtcatct tcaatggcga ttacacaatc tgcaagtttc atcaaaagga gagactagcg
      361 atgtggaatc atgaaatcac tctgatagca aataaaatca ctgggaaaga caaattgaaa
      421 cagaacatca ttgaggaagt caagactgtt ctgttgtgtc gcaagaagtc aattaccagg
      481 tcagagtttt accaagccaa tcaggcaggc attcgtccaa gcctagttgt cgatattcac
      541 agttttgagt acgacaatca agagttggct gaattcggag gtaaaagata ccgcatcatc
      601 aagacttatc cagttgatat tgaaactatt gaattgacct tgacggagaa attatcatga
      661 gcctaactgg tgatttagcc aacgagattg ctaaggcaat ggcagaatat tccgaagaaa
      721 tcgaggataa gattgaccta attgcagaag atgttgtgaa tgaagctgta aatgaactaa
      781 aggccaccag tccaaagagg catggtaaat atgctagaaa ctggcgattc aagaagaacg
      841 caaaagggtc ttatgtgatt tacaatgctg caccaactta ccgacttact cacttactgg
      901 aaaacagtca cttgttacga aatggtggcc gtagtaaagc acaacctcat atcaaacctg
      961 tcgaggagaa ggtcaaagaa aactttgaaa aacggattaa ggagcttggt cgatgaagct
     1021 atcagaattt gcagatatct tggaacaggc tggtttgcct gtaacctatc gagcatatca
     1081 agagggaaat gtccctgata tgccttacct tgtgtatttt gaatctaatc ctattgtcaa
     1141 ttctgccgac aataaaagaa accacgaaat taagtcagtg gttgttgagt tggcatttga
     1201 gagaaaggat gaggatttgg aggagcgttt ggaagagcta tggtctaacc atgagctctt
     1261 ttttgaagct caagaagaaa cttttattga gactgaaagg ctctatgtca agccttacac
     1321 agtctatctc tactagagga ggaatgacat ggaaaataaa gtgacctatg gtctgaaaaa
     1381 tgtacacgtt gcaccaatta ctaatattag tgctgagaca ggggtgctga catacggaga
     1441 gattttccgt ttccctggtg caatggaaat tactcttgaa ccaaaagggg aatcaggtgc
     1501 tattcaagca gatgatattg attatcactt catgaatgcc aacgaaggtt atgagggtaa
     1561 atggaaagta cctcacatca ttgatcaatt tgctaccaaa attcttggtg aaatcaaaga
     1621 cactgaaact ggtgtattga ctgaaaaagg cgatgccgag ccaacaccgt ttgccttgat
     1681 gtttgaattt tcaggggata agaataagac ccgacatgtg ctctattatt gctctgctag
     1741 tcgtccagca actggctcta agacaaagag cggtacaagt gtcaatgagc gagaattaac
     1801 tttcaatgct agcccacgtc cgctcgatac tgtagtgaaa cgctcggtca cttcagcaga
     1861 caagaaagaa gtctatgata attggttcaa gcaagtctat gagccagtcg cagttagcag
     1921 ataaggaggt cctacatgcg taaaatcatt ccgattggtg atcaggagta tgaattggcc
     1981 acaaatggct atactccgat tgcctacaag gaagagtttg gtaaggacta tttccaagac
     2041 ctattctcaa tgttgaacag tcaagcactc ttgtctgagc ttgataagtt ggaacctggt
     2101 caggaattgc aagcgagtga tattgatatg tcggtccttg ctgactttga tatgacgttc
     2161 ttcaatcgtc ttttctggac ctttgccaag tctgccaacc ctcgtatcaa gccttatgct
     2221 caattcttca tggaaatgga agaattccct gtccaagaaa tcggtcgaga cctgatggaa
     2281 atgttgaatg cgagtatgca gacaaaaaag aaacagactc gtcagaatct gcaagcgatg
     2341 aaatctttac agtagaatcc tatctctctt gttgcaagga gactggttta tccattgatg
     2401 acctgaagca tatttcaatc ggaatggctt tggactacca gacggattat gtgaatttac
     2461 gcagtaaaga taagggtggc gaaagaaaag ctactcaaga agattttgac aacttttaag
     2521 aaattagcag tgctgagaga gtgatcctag ggtcaagttc cttgtagtaa gtggattttc
     2581 ggtcatagat gagcttgtaa gctctgctat ttttcgtttg aggtgggagg gtaggcaatt
     2641 ttcaaaggaa aggaggaaac aaatggcaag taacatcaaa ggaattaaga ttgaaattga
     2701 tggggacacg caacccttgc agaaggctct gaaagatgtc aacaagaacg ccactgaagc
     2761 tactaaggag ctgagacaga ttgacaaggc tttgaagttt gatacaggca atgtaacctt
     2821 gctgacccag aaacaggaag tcttacaaca gcaggtatca aataccaagg agaaacttga
     2881 aactctgaga caagcccaag cacaggtgga gaagcaattc cagaatggag acatcggagc
     2941 tgatcagtac cgtgctttcc aacgtgaact ggaaactact caaaatgtcc tcaagggtta
     3001 tgagaataag cttgaaaatg tcaatagagc tctggccaat aatggtcaag ctgtagagac
     3061 caatgtcagc caactgaaca acctacagag tgagcagagc cagttagcat ccgaaatgga
     3121 caaagtgacc agtgctttta aactacaaga gagtgagctc ggtcagaacg cttcagagtc
     3181 tgagaaagtc gcccttgctc agaagaagat tgctgctcaa tccgagattg tcgaaaaaca
     3241 aatctcgaac cttgagaaac aactgtcctt gacaaaaaaa gagtatggtg aaaactcaac
     3301 tgaagctaac aagatggaag ctgagttgaa ccaggctaag acagctctca acaatctcaa
     3361 taatgagatg aacgaaacca agtcggctgc aaatggtgct caggacggac ttgagggaat
     3421 gacaaaaatt gcaagagcgg aagccttgca aaatgtcagc gaaaaactaa gcgctgtttc
     3481 agataagttg cttgaagttg gcacagatgc catggaggca gctgcacagg ttcaggcaag
     3541 caatgctcaa tttcgtaccg tatttggcga tatggaaagt caggcaagac agtctcttaa
     3601 cgctatcggc gatgagatgg acatcgttcc tgaacgactg caaggctcat ttactcaaat
     3661 ggcatccttt gctaagacat caggaatgga aactgctgac gctcttgatt tgactactcg
     3721 agcaacaaga gcagctgctg acggtgccgc tttctacgat aagtccattg aggaagtgac
     3781 ggaaaactta cagtccttcc tgaaagggaa ttatgaaaat gatgcagctt tgggtatatc
     3841 agcaactgag acaactcgaa acgctgctgc aaacaaactt tatgggaaat catttaatga
     3901 gctgagtgaa gcccagaaac agttgacttt gcttcaaatg gtggaagacg ggaatgcact
     3961 ttcgggagct cttggtcagg ctgcaaggga atcagatggc cttgagaacg ttttggggaa
     4021 cttgaaacaa tcagggacga atgcccttgc tgcaattggt cagccaatcc ttgaaatgct
     4081 cattccagta tttcagtcat tagcagatat tgtcaataat gtagcaactt ggttcaccaa
     4141 tttatccccg acaattaaga atattgttgt aattattgga atgcttgtcg tggccgtagg
     4201 tactctactg ccaattattt tagccgtagt ttctggattc cagctactta tgggaggttt
     4261 agcaggacta tccgtaggta tcatgccact gatagggatt attgccggtg taatagctgg
     4321 catagttctc ttagtagtag caatcaagga actatggcaa aacaacgaag gtttcagaac
     4381 ggctgttaca gagatatgga atgccattat gtctgtcatc aatacgattg tgcagcaaat
     4441 atctgatttt gtgatgtcta tttgggagac cttgtctacc tggtgggctg aaaatcagga
     4501 attgattcgg gcaaccgctg agacgatttg gaatgccatt caatccgtca ttcagactgt
     4561 catgagcata cttggtccgc ttattgaagc tagttggaac aacattcagc tggtcatttc
     4621 aacagtttgg gaagttatca agactgttgt tgaaacagcc ataaacgttg tcctgggcat
     4681 tatcacagca gtcatgcaga tcatcaatgg aaactggtct ggtgcttggg aaacgataaa
     4741 gggagtattc tcaactgtct ggaatggtat tcagagcatt gttcagacgc ttctatccgc
     4801 tattcaatca tatattggaa atgtgatgag tggtatatct ggtacgattt caaacatttg
     4861 gaatgcgatc tcaggaaccg tcagcaacat cctcaacggg atatcaaaca cggtttcaaa
     4921 catctggaat ggtatcaaga atagtatttc caatgccatc aacggtgcaa aagatgtggt
     4981 ctcaaatgct atcaatgcta tcaaaggatt ctttaacttt gagtttaagt ggcctcatat
     5041 cccattacca cattttagta tatcaggctc cattaaccca ctagattggt taaaaggtgg
     5101 attacctaaa attggtgttg aatggtatgc gaagggaggc atcttgacca agccgacagc
     5161 atttggtatg aacggtaaca atcttatggt tggcggtgag gcaggcaatg aagctatctt
     5221 accgcttaat gataagacgc tcggagccat tggccgtggt atcgctcaga caatgggagg
     5281 tagtacacca actatcaata tcacgatcac tggcaatgtt gtccgtgagg aagctgatat
     5341 caccaagatt gctaatcaag ttgctcagcg tatcgcagat gagctacaac gtaaaacaca
     5401 attgagagga gggtaaacat gattagacat aatgaattag tgattgacgg tgtaaagaca
     5461 tcgtcttttc ctttcaaagt gattgtgcat gagtcccctt ccgtcacgtt gggagatagc
     5521 aagaccaatc tgctggaaca tgacggcatc agtggagcga ttgtgcagac taacaagcac
     5581 cgggggttga ttgaaaaatc ctacacaatc tatcttgtca agccaacaga ggagcaattg
     5641 aacaagttca tgagcttatt catccgtgaa aagttttggc ttgagaatga gcgtgtgaag
     5701 actacacggc tctggtgcta caaggcaagc gctacagatg cggaacaaga gaaacctggt
     5761 ctttatgtga ccaaggtaac ctttacttgc caccctacta agtttttcaa aggcacagac
     5821 agccagacct tgactgggaa tggggtttta aaggtacaag ggtcagctct tgcttttccg
     5881 aagattacag tagttggtca gagcgcttct gagacatcgt ttacgatagg taaccaagta
     5941 attaaacttg aaaagctctc agaatcgctt gtgatggtca atgatcctga caatcctagc
     6001 tttaagacag ctagcggcaa gctcattaag tgggctggag attttatcac ggttgatact
     6061 gctaaagggc agaatgtcgg tgtggtattg ggaccaggga ttcagtcatt gaaatttgaa
     6121 acagtttggg ggtgggcata gttgctttat ttacttgata aggatgtcaa gacagtcaaa
     6181 tggaatggca ttccgctaca cgaagctagc tctgctattg tcaaagaaga agtcaacggc
     6241 gattttgtat tgactgtccg ctatcctatc actgattcaa gtatctatca gcttatcaaa
     6301 gaggatatgc tgataaaggc acctgcacct gtgctgggtg ctcagctctt ccgcatcaag
     6361 aaacctgttg agaacgatga tagtctggac atcaccgcct accatatcac tgacgatgtc
     6421 atgcaacggt ctatcaatcc tgttagtgtt gttggtcaag gttgtgctat ggctctctct
     6481 caaatggtcc aaaatgctaa gacggacctt gggacttttt cgtttacaag cgacatcatg
     6541 gatagtcgga cctttaacac gacagatgca gagactcttt actcagtcct attggacggt
     6601 aaacacagta ttgttggaac gtgggagggt gagcttgtcc gtgataactt tactctgact
     6661 atcaagcgta gccgtggggc tgaccgaggg gttgtcatca cgacacacaa gaacctcaag
     6721 tcctatcagc gtaccaaaaa ctcccaaagc gtggtcacta ggatacacgc taagtcaact
     6781 tttaaggctg aaggtgctga ggaagaaaca accatcaacg taacagttga tagtccactt
     6841 atcggaaatt atccatacat caacgaaaaa gattatgaga ataataacgc taagacagtg
     6901 gatgagctga gaaagtgggc agaagctaag tttaagcacg agggtatcga caaggtatca
     6961 gatgctattg agattgaagc ctatgagctt gacgggcaag ttatccatct aggtgataca
     7021 gttaacatca agagcaggaa acacaacgtt gatatttaca aaaaggctat tgcttacgag
     7081 ttcaacgctt taacggaaga atacatctcc atcacgtttg atgataagcc tggggtagga
     7141 ggtactggtg tatctagtgg cgtgtctaat gctgccgatg tgatcttgaa tgccaatcga
     7201 aacgctcaag atgtcgctat cgagcgagct atccgaaatg ctaaccaagc ctttgacgcc
     7261 gaatttgaca agcgtgttga atccatcaac gacggcatcg aacaagctca agctgaagct
     7321 gaacgtcacg ctgacgctat taagcaagct attgatactg aaatcactca agtcaaccaa
     7381 tccatgcaag cacaatcaca ggaacacgac agacaggtcg cagatatatt gtccaaaact
     7441 cagtctgtcg agtcgcttgc caaccaagcc aagtcggatg ctgctagtgc attggctaga
     7501 gccaaccagg tcaagaccga agctatcgca gatgcgaggg ctcaggttgc gacggttagt
     7561 caggcgctaa acactgccaa gtccgaactg cagacggcaa tcgctagtgc agaccaaaag
     7621 gctagagata gccaagcaag tgctacagct ttgcgaaacg acctcaactt gcaagcgagc
     7681 aagattttgg agcaagcacg agcacagacg gctttgacca atcgtgtgtc gatagtcgaa
     7741 actctggcag atggaacgag gtcaacagtc gcagaactct ctaaaaccgt ttctaaggcg
     7801 actggagaca tcactagtgt taacagtcga accaagaccg tagaagacac tctgagccaa
     7861 acgaggaccc aatatgaggc tctgacgcag actgtcaata ctcagacagg acagattgag
     7921 agtatcaatc gcaagactgc tgacttgcag agtggcatag atggggtgac ggagcggttt
     7981 gagagtttga ggatagaaga caa
//
LOCUS       DASFQD010000102         7962 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.103, whole genome shotgun sequence.
ACCESSION   DASFQD010000102 DASFQD010000000
VERSION     DASFQD010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7962)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7962)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7962
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.103"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(193..1389)
                     /gene="tuf"
                     /locus_tag="U1021_001775"
     CDS             complement(193..1389)
                     /gene="tuf"
                     /locus_tag="U1021_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014335040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEM4712287.1"
                     /translation="MAKEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLARRLPSSV
                     NQPKDYASIDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQM
                     DGAILVVASTDGPMPQTREHILLSRQVGVKHLIVFMNKVDLVDDEELLELVEMEIRDL
                     LSEYDFPGDDLPVIQGSALKALEGDSKYEDIVMELMNTVDEYIPEPERDTDKPLLLPV
                     EDVFSITGRGTVASGRIDRGTVRVNDEIEIVGLQEEKSKAVVTGVEMFRKQLDEGLAG
                     DNVGVLLRGVQRDEIERGQVISKPGSINPHTKFKGEVYILTKEEGGRHTPFFDNYRPQ
                     FYFRTTDVTGSIKLPEGTEMVMPGDNVTIDVELIHPIAVEQGTTFSIREGGRTVGSGM
                     VTEIEA"
     gene            complement(1745..2728)
                     /locus_tag="U1021_001776"
     CDS             complement(1745..2728)
                     /locus_tag="U1021_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti sigma factor C-terminal domain-containing
                     protein"
                     /protein_id="HEM4712288.1"
                     /translation="MNMKTFEIATKKSKKKHLWKTVGLSILGLLLITGATLKTLQILT
                     ANNGEKIYQEHELLSQVAYPNIEYSTYYYKATSLFAGAVHADRHKDLAGVPVAFGDYE
                     YHYDWLGTYLNFSQDGPSYKGEIAYDRQTWSKLPLFYNTEKVDTDDFATVPSQELSLV
                     KDMSNQLVEVAITFDKKYSFGDLQTMLPQNLKKNWYWIGTASKKNTADFRIDQLFGFQ
                     GEALKVYEPDAELPAEAATWNPLTPMKKIAEQYNHYIGEYALVTDVKTFLDKFGKTDF
                     SKQEEIDQLEFAGIILTGKAEDFAQLEGKDWIYASSIGASIPIQPYYQLHH"
     gene            complement(2709..3212)
                     /locus_tag="U1021_001777"
     CDS             complement(2709..3212)
                     /locus_tag="U1021_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEM4712289.1"
                     /translation="MSIKLDQYEKEIIGIAEEISYYLQKSGATFSDSQDIAQDVLVKI
                     LEAELVLPFDKLRAWLYRSAVRAYIDKYRRDKRYHEILQKEFFTPENFLVYDQEDYEE
                     LYQAVADLPAKYQHVIDLYYFQDMSVKEIAHILGYSQSLVKINLYRGRKLLAKNLKEK
                     GYEYENF"
     gene            complement(3327..6023)
                     /gene="ppc"
                     /locus_tag="U1021_001778"
     CDS             complement(3327..6023)
                     /gene="ppc"
                     /locus_tag="U1021_001778"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000058210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEM4712290.1"
                     /translation="MAIQKLENYNNKEAIREEVTILTSILEEVAAQMMPAETFAKIVE
                     LSQLSRQDDYQALIAIISQLNNDELAVISRYFAVLPLLINISEDVDLAYEINHQNNID
                     QDYLGKISTTIDMVSKQENAAEILEKLNVVPVLTAHPTQVQRQSMLDLTKHIHELLRR
                     YRDVKLGLLNKNKWEDELRCYIEIIMQTDMIREKKLKVTNEITNVMEYYNSSFIKAVT
                     KLQREYKRLAAEKGIVLNNPRPITMGMWIGGDRDGNPFVTAETLKLSALTQCEVIMNY
                     YDEQLYKLYRNFSLSTSIVNVSTAVKMLADLSEDSSVYRENEPYRRAFHYIQMKLANT
                     RDYLVHNKPSDARYSNVAEFKADLLAIKQSLVENKSMALLKGDFTELLEAVEAFGFYL
                     ASIDMRQDSSIHEASVAELLASARIVEDYSSLSEEAKCHVLLKQLETDPRILSATHMP
                     KSEQLEKELAIFAAARELKDKLGEEIIKQHIISHSESVSDLLELAVLLKEVGLVDVDK
                     ARVQIVPLFETIEDLDNAPDTMRQYLQLDLAKRWIAGNKYYQEIMLGYSDSNKDGGYL
                     SSGWTLYKAQNELMQIGQDYGVNITFFHGRGGTVGRGGGPSYDAITSQPFGSIKDRLR
                     LTEQGEVIGNKYGNKDAAYYNLEMLVSATLDRMVTQMITDPNEIDGYRETMDEIVSDS
                     YRIYRDLVFNNPHFYDYFFAASPIREVSSLNIGSRPAARKTITEIGGLRAIPWVFSWS
                     QNRVMLPGWYGVGSSFKRFIDKHPDNLSKLQKMYESWPFFRSLLSNVDMVLSKSNMNI
                     AFEYAKMCESEEVRNIFHVILDEWQLTKEIILSIEQNDELLAELPFLKASLDYRMPYF
                     NVLNYIQIELIHRLRRGELSKEQENLIHITINGVATGLRNSG"
     gene            complement(6044..7258)
                     /locus_tag="U1021_001779"
     CDS             complement(6044..7258)
                     /locus_tag="U1021_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEM4712291.1"
                     /translation="MKIDKRQLLNYSILIPYLILSVIGLVMVYSTTSATQIINGRNPF
                     RTVINQAGFWIVSLVAIYTIYRMKLSFLRKKAVIYSVILVEVFLLAISRLFTPINGAH
                     GWIPLPIAGTLQPAEYLKLIIIWYLAHEFAKQQADIRTYDYVSLIKGSWIPKEFTDWR
                     VVSLLLLGLVATLPDLGNATIIVLIMVVMISVSGIAYRWFSTAILGIVVASTVILGTI
                     RILGVETVEKIPLFGYIARRFAAYFDPFGNATNSGLQLTHSYYAMSNGGWLGRGLGNS
                     IEKKGYLPEAHTDFAFSIVIEELGFVGASLILALLFFLIIRIIIVGVRARSPFNAMMA
                     LGMAGMLLIQTFVNIGGISGIIPATGVTFPFLSQGGSSLLIISIGIGFVLNIDASEKR
                     RLIEEEIERTLI"
     gene            complement(7395..7760)
                     /locus_tag="U1021_001780"
     CDS             complement(7395..7760)
                     /locus_tag="U1021_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4430 domain-containing protein"
                     /protein_id="HEM4712292.1"
                     /translation="MKKISIMLTVVFSLFLAACTNTTEKQSESAIEVTLQITTKDKEN
                     RQEVTAEEGDSVMDVLKEHHDIVEDNGLITEIDGVSQDTSTNTYWMYKVNGQMADKGA
                     KDLTVANGDEIEFYLETFE"
BASE COUNT         2373 a         1722 c         1461 g         2406 t
ORIGIN      
        1 tttaatccac tacctcacga tagtcagact tgcgaatcgc tactggtttc atcggtagca
       61 ggtacctacg gaggacctac acttctgatg tacgacatgc ctgtcatatt agaaaacccc
      121 actagccgag gctagtgggg tccaatgtta agttgtctga cttaaattgt tatttctggg
      181 aactcaatcg aattaagctt cgatttctgt aaccatacct gaaccaacag tacgtccacc
      241 ttcacggata gagaaagtag taccttgttc aacggcgatt gggtggatca attcaacgtc
      301 gatagtaacg ttatcaccag gcattaccat ttcagtacct tctggcaatt tgattgaacc
      361 agtaacgtca gttgtacgga agtagaactg tggacggtag ttgtcgaaga atggagtgtg
      421 acgtccacct tcttctttag taaggatgta aacttcacct ttgaatttag tgtgtgggtt
      481 gatagaacct ggtttagaga taacttgacc acgttcgatt tcatcacgtt gtacaccacg
      541 aagaagcaca ccaacgttat cgccggcaag accttcgtca agttgtttac ggaacatttc
      601 aacaccagta acaactgctt tagatttttc ttcttgaaga ccaacgattt cgatttcgtc
      661 gttgacacga acagtaccac ggtcgatacg tcctgaagct acagtaccac gaccagtgat
      721 tgagaatacg tcctcgactg gaagcaacaa tggtttgtca gtgtcgcgtt ctggttctgg
      781 aatgtactca tcaacagtgt tcatcaattc cataacgatg tcttcgtact tagagtcacc
      841 ttcaagagct ttaagagctg aaccttggat aactggaaga tcatcacctg ggaaatcgta
      901 ttctgaaaga aggtcacgga tttccatttc aaccaactca agcaattctt catcgtcaac
      961 caagtcaact ttgttcatga agacgataag gtgtttaaca ccaacctgac gtgaaagaag
     1021 gatgtgctca cgagtttgtg gcattggacc gtcagttgaa gctactacaa ggatagcacc
     1081 gtccatctga gcagcaccag tgatcatgtt tttaacgtag tccgcgtgtc ctggagcgtc
     1141 gatgtgagca tagtgacgtt tttcagtttc atactcaacg tgtgcagtgt tgatagtgat
     1201 accgcgttcg cgttcttctg gagcagcatc gatagacgca tagtcttttg gttggttaac
     1261 tgatgaaggc aagcgacgtg ccaatacagt tgtgatagct gctgtcaaag tagttttacc
     1321 gtggtcaacg tgtccaattg taccaatgtt aacgtgtggt ttactacgat cgtatttttc
     1381 ttttgccatt ttggtaaaag cctccaataa aatatatttt atagatagac agtaggcaat
     1441 acagtctaac tttaccttac tattctatca aattgtagca gaattgcaag cattttctat
     1501 cgttttttat tttatccatt ttctgcaagg gctattagct tcgcttataa ctttttttat
     1561 catcccattt taacctatta ctcaactaaa aacacctcac ttccatagga atattgatgt
     1621 taccatagct acaaggtgcc acaaatacga gactactgca acagaccttt ctccattcag
     1681 tcatcctacg actacctgac aagcctcttg ctataggtgt agaaaatata ttgactattt
     1741 tcacttaatg atgcagttga taataaggct gaataggaat ggacgcgcca atactagaag
     1801 catagatcca gtccttgcct tccaactgag caaagtcttc tgctttgccc gttaggataa
     1861 tgcctgcgaa ctccaactga tcaatctctt cttgtttaga gaagtccgtt ttaccaaatt
     1921 tgtccaagaa agttttgaca tctgtaacga gtgcgtattc ccctatataa tgattatact
     1981 gttctgctat ttttttcatc ggtgttaaag gattccatgt cgctgcctct gctggtaatt
     2041 cagcatctgg ttcataaacc tttagagcct ctccttgaaa accaaacaac tgatcaatgc
     2101 gaaaatcagc tgtgttcttc ttagaagctg ttccgatcca gtaccaattc ttttttaaat
     2161 tttgaggaag catggtctgc aagtctccaa aactatattt tttatcaaaa gtgatggcta
     2221 cttctactag ctgattggac atgtctttca ctagagaaag ttcttgactg ggaacagttg
     2281 caaagtcatc tgtgtcaact ttctccgtat tatagaagag agggagtttt gaccaggttt
     2341 gacgatcata ggcaatttct cccttataag aaggtccatc ctgagaaaaa ttcaaatacg
     2401 ttcccaacca atcatagtgg tattcatagt caccaaaggc aactggaacc cctgccaagt
     2461 ctttgtggcg atctgcatgg acagctccag caaatagaga ggtcgcttta taatagtagg
     2521 ttgagtattc aatgtttgga taggcaactt gtgacaataa ttcgtgttct tgatagattt
     2581 tttcaccatt attggcagtc aaaatctgta aggtcttcaa ggtcgctccc gttatcagca
     2641 agagccctaa tatagataga ccaaccgttt tccataagtg ttttttctta cttttctttg
     2701 ttgcaatttc aaaagttttc atattcatac cctttctctt ttaagttttt tgctagaagt
     2761 tttcgaccgc ggtaaagatt gattttcacc aaactctgac tatatcctaa gatatgggca
     2821 atctctttga cactcatatc ctgaaaataa tacaggtcaa tgacatgctg atacttggct
     2881 ggcaggtctg caacagcttg atagagttcc tcataatctt cttggtcata gaccaaaaaa
     2941 ttttcaggtg taaaaaactc cttttgtaaa atttcatggt agcgcttgtc tcgcctgtat
     3001 ttgtcaatgt aagcccgaac tgccgaacga taaagccagg ctcgtaattt atcaaaagga
     3061 aggacaagtt ctgcttctaa aattttcact agtacatcct gggctatatc ctggctgtct
     3121 gaaaatgtgg cgcctgattt ttgcaggtag taggaaatct cctctgcaat accaataatt
     3181 tctttttcat attgatctag tttgatactt atcccctcct ttcactgata aaacgaatga
     3241 aaatgtgttt ggttacacct tttttctacc attatatctt tttagacctc aaaaaaacaa
     3301 cctccgaaga agttgtttta tgtctattaa cctgagttgc gcaaacctgt tgccacaccg
     3361 ttgatggtaa tatgaatgag attctcttgt tctttgctca attctccacg acgaagacga
     3421 tgaattaatt caatctgaat atagttaagt acgttgaaat acggcatgcg ataatcaaga
     3481 ctggctttta ggaacggtag ttctgctaaa agctcatcat tttgctcgat tgacaaaatg
     3541 atttctttgg tcaactgcca ttcatctaaa atgacatgga agatatttcg tacctcttcg
     3601 ctttcacaca ttttagcata ttcaaatgcg atattcatat tggatttaga caataccata
     3661 tccacgtttg atagaagtga acggaagaat ggccaagatt cgtacatttt ttgtaactta
     3721 gacaaattat cagggtgctt atcaataaag cgtttgaaac ttgaaccaac tccataccaa
     3781 cctggcaaca tgacacggtt ttgtgaccag gagaataccc atggaatcgc acgcaaacca
     3841 ccgatttctg tgatggtttt tcgagccgca ggacgtgagc caatgttcag acttgatact
     3901 tcacgaattg gactagcggc aaagaaataa tcataaaaat gtggattatt gaacacaaga
     3961 tctctataaa tacgatagct atctgataca atttcatcca tggtttcgcg atagccatcg
     4021 atttcatttg gatcggtaat catttgtgta accatacggt caagcgttgc agataccagc
     4081 atttctaaat tataataggc tgcgtctttg ttaccgtatt tattgcctat cacttcgcct
     4141 tgttctgtca aacgaagccg gtccttgatg gaaccaaatg gctgagatgt aatcgcatcg
     4201 taggaaggac caccaccacg accaacagta cctccacgac cgtggaagaa ggtgatgttt
     4261 actccgtagt cttgaccaat ttgcatcaat tcattctgtg ctttgtagag tgtccagccg
     4321 gaggataggt agccaccatc cttgttggaa tctgagtagc caagcatgat ttcttggtag
     4381 tatttattgc ctgcaatcca acgtttcgct aaatctaatt gcagatattg acgcatggta
     4441 tcaggtgcat tatctaagtc ctcgattgtc tcaaaaagtg gaacaatctg aacacgggcc
     4501 ttatcgacat ctactagacc aacttctttt aataggacag ctaattccag taaatcagaa
     4561 acactctccg agtgtgaaat aatatgttgc ttgatgatct cctcacctag cttatctttc
     4621 aattcacgcg cagcagcaaa gatggccaat tctttttcta attgttctga ctttggcatg
     4681 tgcgttgcag aaagaatgcg tggatcagtt tccaactgtt tcaaaagaac atggcattta
     4741 gcttcctcag ataaactgga gtagtcttct acgatacggg cagaggccaa tagctccgca
     4801 acacttgctt catgaataga agagtcttgg cgcatatcga tactagctag gtagaaacca
     4861 aacgcttcga ccgcttcaag taattctgta aaatcacctt tcaatagcgc cattgattta
     4921 ttttcgacca aagattgttt gatggctaat aaatcagctt taaactcggc tacattacta
     4981 tagcgagcat ctgacggctt attgtgaact agataatctc ttgtatttgc aagtttcatc
     5041 tgaatatagt gaaaagcacg acgataaggc tcattttcac ggtagacaga actatcttca
     5101 gataaatccg ccagcatctt aaccgctgta gatacattta caatggaagt tgagagcgaa
     5161 aaattccgat agagtttata gagttgctca tcgtaataat tcataataac ttcacactga
     5221 gtcaaggcag acagcttcaa ggtctctgca gtaacaaatg gatttccatc acggtctccc
     5281 ccaatccaca tacccattgt aattggacga ggattattta agacgattcc tttctcagcg
     5341 gccaaacgtt tgtattcccg ctgcaactta gtgacagcct taataaagga agaattgtaa
     5401 tactccataa cgtttgtgat ttcgttggtt accttcaact tcttctcacg aatcatatcc
     5461 gtctgcatga taatttcaat gtaacaacgg agctcatctt cccatttgtt tttattgagc
     5521 aagcccaatt ttacatcgcg ataacgacga agcaactcat gaatatgctt ggttaaatca
     5581 agcatagact ggcgttgaac ctgagtagga tgggctgtca agactggaac aacattcaac
     5641 ttttcaagga tttcagctgc attttcttgt ttggaaacca tatcaattgt tgttgaaatc
     5701 ttaccaagat aatcttgatc aatattgttt tgatggttga tttcataggc caagtcaaca
     5761 tcttctgata tattaatcaa aagtggcaaa acagcaaagt atctagaaat aactgctagt
     5821 tcatcattat tcaactgact gataatagca atcaatgcct gataatcatc ctgacgagac
     5881 agttgagata attctacaat tttagcaaaa gtctctgcag gcatcatttg ggctgctact
     5941 tcttccaaaa tagatgttag aatcgttact tcttcacgga ttgcttcctt gttgttatag
     6001 ttttctaatt tttgaatagc catctcctac ctctttccta tctctaaatt agcgtacgct
     6061 ctatttcttc ttcaattaat cgacgttttt cactagcatc aatattcaaa acaaacccta
     6121 tcccgatgga aataatcaaa agactcgatc caccctgtga caagaagggg aaagttaccc
     6181 ccgtcgcagg aataattcct gaaattcctc cgatattgac aaatgtttga atcagaagca
     6241 tacctgccat tccaagtgcc atcatcgcat taaatggact acgagcacgg acgcctacaa
     6301 taataattcg aataatcaaa aagaacaata aggctagaat taaactagct ccgacaaaac
     6361 cgagttcttc aatgacaatc gaaaacgcaa agtcggtgtg ggcctctggt agatacccct
     6421 ttttctcaat cgaatttccc aagccacgtc caagccatcc accgttactc atcgcatagt
     6481 aagaatgagt caattgaaga cctgaattgg tggcattacc aaatggatca aaataggccg
     6541 cgaaacgacg agcaatataa ccaaagagcg gaattttttc caccgtttct acacccaaaa
     6601 tacgaatcgt ccctagaata actgttgagg cgaccacaat tcccaaaatc gctgttgaaa
     6661 accagcgata ggcaatccca ctcacactaa tcatcacgac cataatcagc acaataatcg
     6721 tcgcatttcc caagtctggc agtgtcgcaa ctagaccaag gaggagcaga ctgaccaccc
     6781 gccaatctgt aaactctttc ggaatccaac ttcctttaat caacgataca tagtcataag
     6841 tccgaatatc cgcctgttgt tttgcaaact catgtgccag ataccaaatg ataattaatt
     6901 tcaaatattc tgccggctgc aaggttcctg cgattggcag aggaatccag ccatgagccc
     6961 cgttaatcgg agtaaacaac cgagaaatag ctaacagaaa tacttctacc aaaataaccg
     7021 aatagataac ggctttcttg cgtaaaaaac ttaatttcat acgataaatc gtatagattg
     7081 ctaccaagct gacaatccag aatcctgcct ggttaatcac tgttctaaat ggatttctac
     7141 cattaataat ttgcgtagca ctggttgtcg aatagaccat gaccaaccca atcaccgata
     7201 agatgagata gggaatcagt atggagtaat tcaacaactg gcgtttgtca atcttcattg
     7261 cttatccaac cttcttcgaa tatagctctt attatagcat actttgtata aaaatactta
     7321 tcactttcta agttgctctg caaacattcg gaactaactt ttgtcgacaa gaaaaaggcc
     7381 gaagcctttc atatctattc aaatgtttca agataaaatt caatttcatc cccattcgca
     7441 actgtaaggt ctttcgcccc tttatcagcc atttggccat taactttata catccagtat
     7501 gtattggtac tcgtatcttg gctaacacca tcaatttctg ttatcaaacc attgtcttct
     7561 acaatgtcat ggtgttcttt aagcacatcc atgacactat caccttcttc cgcagtcact
     7621 tcctgacgat tctctttgtc cttggttgta atctgcaaag tgacttcgat agccgattca
     7681 ctctgtttct cagtagtgtt tgtacaagca gccaagaaga gcgagaagac aaccgtcaac
     7741 ataatactaa tttttttcat ttataaaatc tcctaaaaat ataatcaata attggataaa
     7801 acaaaactgt tgaagcagcg tgtaaactat caaagactag accattaagc cagaagacga
     7861 taggggaagt cccaaactgt gtagcagata aaaaacttat cgttagccca tacaaaaaga
     7921 caagaatccc cgccagaaga ctctgtagcc acaagggaat gt
//
LOCUS       DASFQD010000103         7925 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.104, whole genome shotgun sequence.
ACCESSION   DASFQD010000103 DASFQD010000000
VERSION     DASFQD010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7925)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7925)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7925
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.104"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(462..1703)
                     /locus_tag="U1021_001781"
     CDS             complement(462..1703)
                     /locus_tag="U1021_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEM4712293.1"
                     /translation="MRKFLLTLTTVIALFFTSTPILAEDFSVAAKHAIAVEVSSGKIL
                     YEQDAETKASIASISKTLSIYLVYEAMAKGEITLDTMVDISDYPYSLTSNTELSNVNL
                     DERSYSVRDLLNASLITSSNSAIIALAEKIAGSEAAFVDRMKAKVQEWGITDAKIVNV
                     SGLDNTDLGENIYPGSSPEDVNMFSALDVAIIARRLILDYPQVLDITSLNAYDFGGYT
                     YYSTNQMLSDGTHARGGVDGLKTGTSNSAGSSFLATTQQAGMRIITVVLNATDGLTSP
                     ENRFVATNDLMNYVYSNFSLVTLVKKGEAFEDSKINVFNGEKETSPVVAAADLTVVQR
                     NQTDNVPTATFTTDIKEIDAPLKAGTLVGKLQLKDQDLIGKGYISEQASVDMIIPSDM
                     KEASWPFSWWNQFVRYVNEKL"
     gene            1918..3711
                     /locus_tag="U1021_001782"
     CDS             1918..3711
                     /locus_tag="U1021_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM4712294.1"
                     /translation="MKKTTKLFALAGITLLSASVLAACGAKSSSSSSEQNLSFPSEVK
                     QDGTAVADAQLKYAFVSATTSSGLLIDELTENTTDSTFGGMVDISMFGYDGDRKLDDS
                     GLAKAEFDVKGKKITVSLTGKDYKWSDGEPFTINDYIFTIKSMASKDYTGVRFDDRFL
                     NIVGMEEYVAGTASDISGIKKVDDYTVELTVKEMSPSMMYAGGDVPAYIQPEHIYKDI
                     PVADWEKSEYSRTSKLVGMGPWKIKEIVNGESITYVPNEYFFKGTTPKTSSLKIDIVS
                     PDTIVSEMKAGNYDIADMPVDQLDSYKDASNLNIVGSLDSAYEYISFNFGKYDESAKK
                     NVMDENAKMNDVKLRQAIAYAIDTKTAGESLYNGLYHPANSLIISFFGDIHDSELEGY
                     SYDPEKAKKLLEEAGYKDVDGDGIREGKDGKEFKITFAARKRTEANEALVQQYIAWWK
                     EVGLNVELYTGRTVEGKSFYNSVQANDAAIDMYAGGWSTGYDPNPTGLWGPIAAFNMS
                     RFVSDENTKLLNAISSTESFDDKKNVENYKAWQKYAHEQAFAIPTFESESITALNKRV
                     KNYDSNYGSASGKGIALENIELTADKGVAAE"
     gene            4089..5087
                     /locus_tag="U1021_001783"
     CDS             4089..5087
                     /locus_tag="U1021_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712295.1"
                     /translation="MATEKPLLDIKDLHVGFRIGDDYFDAVDGVDISLQKNEILAIVG
                     ESGCGKSTLATTIMGLHNPLNTKITGSIQYNDIELIGMDEAKYNTVRGNDIGMIFQDP
                     LASLNPLMTIGAQIDEALFYHTDLDTNARTERVLELLAQVGIPNPKRTFKQYPHELSG
                     GMRQRIIIAMALSCKPPIIIADEPTTALDVTIQAQILDLLNDIQAETGSGIILITHDL
                     GVVAETADRVAVMYGGQFVEVAPVEELFTNPKHPYTRSLLKSNPQSGSEGGDLHVIEG
                     IVPPITKMVRKGCRFAPRIPWIGAEAHEENPSMHEVGPNHFVRCTCHETFYFEGEA"
     gene            5090..6031
                     /locus_tag="U1021_001784"
     CDS             5090..6031
                     /locus_tag="U1021_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712296.1"
                     /translation="MGFIEVKDLKVHYPIRSGFFNRVTDHVYAVDGVNIEFEEGKTYG
                     LVGESGSGKSTIGKAIIGLERATSGQIIYEGQDVTNKSRGKKGNFNRDVQMIFQDSLS
                     SFNPKKRILDIIAEPIRNFDRLSPDEEKKKVLQLLDTIGLNEEALIKYPHEFSGGQRQ
                     RIGVARALASNPRLIIADEPVSALDLSVQAQVLNYMKRIQDEFKLSYLFISHDLGVVQ
                     HMCDELFIMYRGRFVETGNKNDIYNNPQHIYTKRLLSAIPTIDPLNRLKNKEKRLAAE
                     KEYQEMQGQYYDENGRVYDLRSFSETHQVALPEGGQN"
     gene            6033..6989
                     /locus_tag="U1021_001785"
     CDS             6033..6989
                     /locus_tag="U1021_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010750774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4712297.1"
                     /translation="MWKTVLRRLLMMIPQIIILSVIAFFVAKMMPGDPFTGLIDPNID
                     PAIIEQKRIAAGYYDPIPVQYFRWVGNLLQGDFGQSVIFKQPVVDVIMQRLNNTIWLS
                     LLTMVLTYLIALPLGMIAGRYQNSLADKIIGVYNFLTFSTPTFVFAILMLWMFGFSLG
                     WFPTRGSIDGGVEGFAAILSRLHHMILPAITMAILSTTVTIQYLRTGIIDAKSQDYVR
                     TARAKGVPERVVYNRHIFRNSILPIASFLGYELTGLIGGSIFIENIFTYPGIGQLFYN
                     SISSRDYSVILALLLIFGMGTLLGTLISDIIMSIVDPRIRVK"
     gene            7003..7905
                     /locus_tag="U1021_001786"
     CDS             7003..7905
                     /locus_tag="U1021_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4712298.1"
                     /translation="MSKENKKQVQSASTPPGGFRVIAREFMKDRLALTSLIILVTVLL
                     AVFIGALLLDQEQVMKVNLLGRYLEPGVNGYILGTDEGGKDIFGQLIIGARNSIIIGF
                     TITIITSIVGISIGLISGYYGGRLDGFLMRIVDFIMILPVTMLIIVFVTVIKNYTIYH
                     FILIMSAFYWTAKARLFRTRTLSEASLDYVNASKTLGTSDFMIMFREILPNLSSLIIV
                     NLTLNFAGNIGIETSLTYLGFGLPSTVPSLGTLIANARNADILENKTWIWLPAAIFIL
                     VMMLCINYVGQAFQRAADAKQRLG"
BASE COUNT         2347 a         1427 c         1691 g         2460 t
ORIGIN      
        1 aaatagagag cgacggaagt cgctcttctt tgtaaattta gcaaactagt ctgggagact
       61 agattaccct actgacatcg cttccttaca ggaagcgaca tataatacgg agttccgcag
      121 gaactctctc caactcaatc tccaaccgag gttggagata aagagcgacg gcagtcgctc
      181 ttctttataa ccttataaca atttcgtacc ttccacgctc gtcgttttct gtaagaaaac
      241 gatatgtagc taggagtttc gtagaaactc tctccaaccg aggttggaga gagagagcga
      301 cggtagtcgc tcttctttgt aattcagata accttgtgac tcaaatagct ttaaagccat
      361 tcaaacctgt caaactcccc actgaagtag tagataagga atagcggatg tcactctgcg
      421 ataaaaaata gtatgtcgaa aatcgttcga catactattt tttataattt ttcattgaca
      481 tagcggacaa attgattcca ccaagagaaa ggccaggacg cttctttcat atcgctaggg
      541 ataatcatat cgacactagc ttgctcggaa atataacctt ttccaatgag atcttgatct
      601 ttcagttgca gtttgccaac cagggtccct gctttgaggg gagcatcaat ttcttttata
      661 tccgttgtga aagttgcggt ggggacatta tcagtttgat ttcgttgaac aacagttaaa
      721 tctgctgctg caacaacagg acttgtttct ttttcgccat tgaaaacatt tattttacta
      781 tcttcaaaag cttcaccttt ttttactagc gtaacaagcg aaaagttaga ataaacatag
      841 ttcattaaat catttgtcgc gacaaatcga ttttctggag aggtcagccc atcagtagca
      901 ttcaatacta ctgtgataat gcgcatacca gcttgttgag ttgttgcaag aaaacttgaa
      961 cctgctgagt ttgaggtccc tgtttttaag ccgtcaaccc ctccacgagc gtgagtacca
     1021 tcgcttagca tttggttggt gctatagtaa gtgtagccac caaaatcgta ggcgtttagt
     1081 gaggtaatgt cgagtacctg aggataatcg agtatcaatc gtcttgcaat gatagcaaca
     1141 tctagggctg aaaacatatt tacatcttca ggactggagc ctggataaat attttcaccc
     1201 aagtcggtat tgtctagtcc ggatacattg acaatctttg cgtcggtaat tccccattct
     1261 tggacttttg ctttcattcg atccacgaat gcagcttcgc taccggctat tttttctgcc
     1321 agagcaataa tagcactatt ggatgatgtt attaaagaag cgtttaatag gtctcttact
     1381 gaataggaac gttcatcaag gttgacgttg cttaattctg tattagaagt gaggctatag
     1441 ggataatcag aaatatctac catagtatct aaagtgattt caccctttgc cattgcttcg
     1501 tagaccaggt aaatgctcaa tgtcttactg atagaagcaa tgcttgcttt ggtttcggca
     1561 tcttgctcat acaagatttt gccgctactt acttcaactg cgatagcatg cttagctgca
     1621 acagaaaaat cttctgccaa aataggtgtg gaagtgaaaa aaagagcaat aactgtagtg
     1681 agtgttagta aaaatttacg cataatcatt cctttggctg ttattttgtt ctattatatc
     1741 acaagaaatg tgagaaaaat ttggaaaaaa tatgtaaaaa ataagaaaat gctgaaaaat
     1801 tatgttttta caaaattttc tgacaaaaaa gactttattt aagaaaattt tatgatataa
     1861 ttatttttat aagacatagt aatcagtgtc aaagaaaaag aaaaacagag gtgttttatg
     1921 aaaaagacaa caaaactctt tgccttagca ggtatcacac tcttatctgc atctgtttta
     1981 gcagcttgtg gtgctaagtc gtcatcaagt tcatcagaac aaaacttgtc attcccatct
     2041 gaagtaaaac aagatggaac agcagtcgca gatgctcaat tgaaatatgc atttgtttca
     2101 gctacaactt catcaggtct cttgattgac gagttgactg aaaatacaac tgactcaaca
     2161 tttggtggaa tggttgatat ttcaatgttt ggttacgatg gagatcgtaa gttagatgat
     2221 tctggtcttg ctaaagctga atttgatgta aaaggtaaga aaatcactgt tagtttgaca
     2281 ggtaaagatt acaagtggtc agatggtgag ccatttacaa tcaatgacta catctttact
     2341 atcaagtcaa tggcaagcaa agactataca ggtgttcgtt ttgatgatag attcttgaac
     2401 attgtgggta tggaagagta tgttgcagga acagcatcag acatctctgg tattaagaaa
     2461 gttgacgact acacagtaga attgactgta aaagaaatgt cgccttcaat gatgtatgcg
     2521 ggtggtgatg tcccagctta tatccaacca gaacatatct ataaagatat ccctgttgca
     2581 gactgggaaa agagcgagta ctcacgtaca tctaaacttg ttggtatggg accttggaaa
     2641 atcaaggaaa tcgtaaacgg tgagtctatc acttacgtac caaacgaata cttcttcaaa
     2701 ggtacaacgc caaaaacaag ctcattgaag attgacatcg tatctccaga tactattgtt
     2761 tctgaaatga aagctggtaa ctatgacatc gcagatatgc ctgttgacca gttggattca
     2821 tacaaggatg cttctaactt gaatatcgtt ggttctttgg actcagctta tgaatacatt
     2881 tcatttaatt ttggtaaata tgacgagtct gctaagaaaa acgtcatgga tgaaaatgct
     2941 aagatgaatg atgtgaaact tcgtcaagca attgcctatg cgattgatac taagacagct
     3001 ggtgagtcat tgtacaatgg tctttaccac cctgcaaact cattgattat ctcattcttc
     3061 ggcgacattc atgattcaga gttggaaggc tattcatacg atcctgaaaa agcgaaaaaa
     3121 ctcttggaag aagctggcta caaagacgta gatggcgatg gtatccgtga aggtaaagat
     3181 ggtaaagagt tcaagattac ctttgcagct cgtaaacgta cggaagcaaa cgaagcactt
     3241 gtacaacaat acattgcttg gtggaaagaa gttggcttga acgttgaact ttacacagga
     3301 cgtacagttg aaggtaagtc gttctataac tcagttcagg ctaatgatgc tgctattgat
     3361 atgtatgctg gtggatggtc aacaggttac gatccaaacc caacaggact ttggggtcca
     3421 atcgcagcct tcaacatgtc acgtttcgtg tctgatgaaa atactaagtt gttgaatgca
     3481 atcagctcaa cagaatcatt tgacgataag aaaaatgttg agaactataa ggcttggcaa
     3541 aaatatgctc acgagcaagc atttgctatt ccaacatttg aatctgagtc aatcacagcc
     3601 cttaacaaac gtgtgaaaaa ctatgattct aactatggtt cagcttcagg taaaggtatc
     3661 gctcttgaaa atatcgaact tacagctgat aaaggtgtag cggcagaata gttttataaa
     3721 gaagataata gaatctgaaa aagccaactt gcttggcttt tttcagattg ctattggaat
     3781 tttctgataa ttatggtata gtagactcag tacacaaaaa atgagtcact actaacaaaa
     3841 actcaagatg gatcacatta acctactcaa tttctaattg agacagtaat agggatggtc
     3901 ttgatttatg attggatata gtacattttt tacttctggg taaccgctat caaacgataa
     3961 ttgatagaaa tatgttattc tagagtagtt atataaagtc agttaatcaa acattatatg
     4021 aacttgataa tcgtaaggat attgaattga ttgagcttga ttagctggca cataaaggag
     4081 gaaaaagcgt ggctaccgaa aaaccgcttt tagacattaa agatttacac gtcggtttcc
     4141 gtattggaga tgattatttt gacgctgttg acggtgttga catctcattg caaaaaaatg
     4201 aaattttggc aattgtaggg gaatctggtt gtggtaaatc aactttggca acgaccatta
     4261 tgggcttgca taaccctttg aataccaaaa tcacaggaag tatccagtac aatgatattg
     4321 aattgattgg tatggatgaa gccaagtaca atacggtacg tggtaatgat attggtatga
     4381 ttttccaaga tcctttggct tctttgaatc cattgatgac gattggtgca cagattgatg
     4441 aggcgctgtt ctatcacact gatttggata ccaatgctcg tacagagcga gttttggaac
     4501 tcttggctca ggtaggtatt ccaaatccta agcggacatt taaacagtat ccacatgagc
     4561 tttcaggtgg tatgcgtcag cgtatcatta ttgcgatggc cttgtcttgt aaaccgccaa
     4621 ttattattgc ggacgaaccg acaacagcct tggatgttac aattcaagca caaatcttgg
     4681 atctcttaaa tgatattcaa gcggagacag gttcgggtat tattttgatt acccatgact
     4741 tgggagtagt tgcagaaact gctgatcgtg tggctgtcat gtacggtggt cagtttgtcg
     4801 aagtagcgcc agtagaagaa ctctttacca atccaaaaca tccatataca cgttcgctct
     4861 tgaagtcaaa tcctcaatca ggtagcgaag gaggcgatct tcatgttatt gaaggtattg
     4921 tgccgccgat tacaaaaatg gttcgtaagg gttgccgttt tgctccacgt attccgtgga
     4981 ttggagcaga ggctcatgaa gagaatccga gcatgcacga ggtaggtcca aatcactttg
     5041 ttcgttgtac ctgccatgag acattctatt ttgaagggga ggcctaatag tgggatttat
     5101 tgaagtaaaa gatttaaaag tccattatcc aattcgtagt ggcttcttta accgtgtgac
     5161 ggatcatgtc tatgctgtcg atggcgttaa tattgagttt gaagaaggaa aaacctatgg
     5221 tttggtaggt gagtcaggtt ctgggaaatc gaccattggt aaggcaatta tcggtttaga
     5281 gcgtgccact tctggtcaga ttatctatga aggacaagat gtaaccaaca aatcacgtgg
     5341 taaaaaagga aactttaatc gtgatgttca aatgattttc caagattctc tttcaagttt
     5401 taacccgaaa aaacgtattt tggacatcat tgcagaacca atccgtaact ttgaccgttt
     5461 atctccagat gaagaaaaga aaaaagttct tcaactcttg gatacaatcg gtctaaatga
     5521 agaagctctg attaaatatc ctcacgaatt ctcaggtggt caacgccaac gtatcggtgt
     5581 tgctcgtgct ttggctagta atcctcgttt gattattgca gatgagccgg tttctgcctt
     5641 ggatttgtct gtgcaggcac aggtcttgaa ttatatgaaa cgtatccaag atgagtttaa
     5701 gctcagctat ctctttattt cccatgacct cggtgttgtg caacacatgt gtgatgaatt
     5761 gttcatcatg tatcgcggac gtttcgtaga aacaggaaat aagaacgata tttataataa
     5821 tccacaacac atttatacta aacgtttgtt gtcagctatt ccaacgattg acccactcaa
     5881 tcgattgaag aataaagaaa agcgtttggc tgctgaaaaa gaatatcaag aaatgcaagg
     5941 tcaatactat gatgaaaacg gtcgtgtgta cgatttgaga tccttctcag aaactcatca
     6001 agtagccctt ccagaaggag gtcagaacta agatgtggaa aacagtatta cgtcgtttac
     6061 tcatgatgat tccgcagatt attattttga gtgtcattgc gttctttgtt gcgaagatga
     6121 tgccggggga tccctttaca ggattgattg accccaatat tgatccagca atcattgaac
     6181 aaaaacggat tgcggcaggt tattatgacc caatccctgt tcagtatttc cgttgggtag
     6241 gcaatctttt gcaaggagat tttggtcaga gtgttatttt taaacaacca gttgttgatg
     6301 ttatcatgca acgtttaaac aacactattt ggttgtcttt attgacgatg gtgttgactt
     6361 atttgattgc ccttccattg gggatgattg caggtcgtta ccaaaactcg cttgcagata
     6421 aaatcattgg cgtgtataac tttttgacat tttcaactcc aactttcgtt tttgctatcc
     6481 ttatgctttg gatgtttggc tttagtttgg gttggttccc aacacgtggg tcgattgacg
     6541 gtggtgtaga aggatttgca gccattctca gtcgcttaca ccatatgatt ctgccagcga
     6601 ttacaatggc aattttgtca acaacagtaa ctattcaata tcttcgtacg gggattatcg
     6661 atgcgaagag tcaggactat gttcgtacag ctcgtgccaa aggtgttccc gagagagttg
     6721 tttataaccg tcatatcttc cgtaattcta tcttgccaat tgcatctttc ttgggctatg
     6781 aattgacagg attgattggt ggttctatct tcattgaaaa tattttcact tatccaggta
     6841 tcggtcagtt attctataac tctatttcta gtcgtgacta tagtgtcatc ttggctttgt
     6901 tgttgatatt tggtatgggt accttgttgg ggacattgat ttcagatatt atcatgagta
     6961 tcgtggatcc acgtatccgt gtgaaataga aggaggagta aggtgagtaa agaaaataaa
     7021 aaacaagtac aatctgcttc aactcctcca ggtggcttcc gtgtcatcgc gcgggagttt
     7081 atgaaggatc gacttgcatt gacctcatta attatcttag tgacggttct cttggcagtc
     7141 tttatcggag cgcttctgtt ggatcaagaa caagttatga aagtcaacct tttgggacgt
     7201 tacttggaac caggtgttaa cggctatatc ttggggacag atgaaggtgg taaagatatc
     7261 tttggtcagc tgattatcgg tgctcgtaac tcgatcatta tcggttttac cattacgatt
     7321 attactagta ttgttggtat ctctatcggt ctgatttctg gttattacgg tggtcgtttg
     7381 gacggattct tgatgcgtat tgtcgatttc atcatgattt tgccagtgac tatgttgatc
     7441 attgtgttcg tgacagttat caagaactat acgatctatc acttcattct catcatgagt
     7501 gccttttatt ggacggccaa ggctcgtcta ttccgtacaa ggactttgtc agaggcaagc
     7561 ttggattatg tcaatgcatc aaaaacattg ggaacaagcg acttcatgat tatgttccgt
     7621 gaaattttac caaacttaag ttcattgatt atcgttaact tgaccttgaa ctttgcggga
     7681 aatatcggta ttgagacttc gttgacttat cttggtttcg gtctaccatc aacagtacca
     7741 agtttgggta ccttgattgc caatgcccgc aatgcagata ttttggaaaa caagacatgg
     7801 atttggttgc cagcagccat cttcatcctt gtgatgatgc tctgtatcaa ctatgtcgga
     7861 caagctttcc aacgtgcagc agatgctaag cagcgtttag gttaattgtg aaaagggttc
     7921 ctttg
//
LOCUS       DASFQD010000104         7894 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.105, whole genome shotgun sequence.
ACCESSION   DASFQD010000104 DASFQD010000000
VERSION     DASFQD010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7894)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7894)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7894
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.105"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            70..738
                     /locus_tag="U1021_001787"
     CDS             70..738
                     /locus_tag="U1021_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEM4712299.1"
                     /translation="MTYSQDYLDDLLVRMAYHSSGIEGNTISLPETVSIILESTLPGK
                     HKSIREFYEIENHKQAFQALLFALDNGEELSLGLVKDIHALLMDRLQHDRGQFKSVQN
                     AIIGATFKTASPEETPFLMQQWVDNANYRLGLPLEIAELLEVLADVHIQFERIHPFSD
                     GNGRTGRLILMFQSMLKLGAPVLISKEDRALYMELLAEQDVTGLSQLLKRSLEFEQER
                     KNQF"
     gene            819..1343
                     /locus_tag="U1021_001788"
                     /pseudo
     CDS             819..1343
                     /locus_tag="U1021_001788"
                     /inference="COORDINATES: protein motif:HMM:NF013579.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
     gene            1388..2977
                     /locus_tag="U1021_001789"
     CDS             1388..2977
                     /locus_tag="U1021_001789"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HEM4712300.1"
                     /translation="MSKTIQAITNQIWSMANELRGNMDASEYKNYILAFMFYRYLSEH
                     QERFLVEDEIISPAPGETVQDAYAREAVGNDLVEYLENTASHLGYAIAPEDTWARLVA
                     KIDNSEIVASDYQTIFDHFNANVELNQDAMEDFRGVFNDINLGDSRLGNSTVARAKSL
                     NSIVKLIDSIEYKNDEGKDILGEIYEYLIGQFAASAGKKGGEFYTPHQVSKILAKIVT
                     LGLEKSDTSFSVYDPTMGSGSLLLTVRNELPQGQHIKFYGQEMNTTTYNLARMNLMMH
                     QVGYSNMILNNADTLESDWPDGVDELGINQPRSFDAVVANPPYSAKWDNRESKLKDPR
                     FMEYGKLAPASKADFAFILHSLYHLNNTGTMAIVLPHGVLFRGAAEGHIRKLIIEKNY
                     LDAVIGLPANLFYGTGIPTTILVFKKNRQTKDVFFIDASKEFEKGKNQNHLSDDMVEK
                     IVETYHNRQSVDKYAHLASIEEIVENDYNLNIPRYVDTFEEEEEIDLGQVTQQLEQDR
                     LEIRALEDKIRQQLKTLGVDF"
     gene            complement(3027..4301)
                     /gene="serS"
                     /locus_tag="U1021_001790"
     CDS             complement(3027..4301)
                     /gene="serS"
                     /locus_tag="U1021_001790"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000884256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEM4712301.1"
                     /translation="MLDIKRIRTDFDGVAAKLATRGVAAETLADIKELDAKRREILVT
                     VEELKAERNTVSAEIAQAKRNKENADDKIAAMQKLSAEVKNLDAQLLEIDEKLNAILT
                     VLPNTPHDSVPVGADEEENVEVRRWGTPREFTFEPKAHWDLGENLDILDWERGAKVTG
                     ARFLFYKNLGARLERALYNFMLDEHIAEGYQEIITPYMVNHDSMFGTGQYPKFKEDTF
                     ELADTNFVLIPTAEVPLTNYYRNEILEEKDLPIYFTAMSPSFRSEAGSAGRDTRGLIR
                     LHQFHKVEMVKFATPEQSYDELEKMTANAENILQKLGLPYRVLALCTGDMGFSAAKTY
                     DLEVWIPAQNAYREISSCSNTEDFQARRAQIRYRDAADGKVKLLHTLNGSGLAVGRTV
                     AAILENYQNEDGSVTIPEVLRPYMGGVDVIKP"
     gene            complement(4516..4890)
                     /locus_tag="U1021_001791"
     CDS             complement(4516..4890)
                     /locus_tag="U1021_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF956 family protein"
                     /protein_id="HEM4712302.1"
                     /translation="MAQSLNKHVELSTTGVSYLSLAGGTVGKFLLGDQALEFYADNNV
                     ENYVQIPWTSIIQIGANVSNRKISRHFEVYTDSGKFLFASKDSGKILKIAREHIGNEK
                     VVKLPTLLQILGQKISNLFAKK"
     gene            complement(4954..5865)
                     /locus_tag="U1021_001792"
     CDS             complement(4954..5865)
                     /locus_tag="U1021_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000136863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter family
                     subunit IID"
                     /protein_id="HEM4712303.1"
                     /translation="MTEKIQLSVKDRKAICWRSTFLQASWNFERMQNLGWAYTMVPAI
                     KKLYTKKEDQIAALKRHMEFFNTHPYVAAPIVGVTLALEEERANGADIDDAAIQGVKI
                     GMMGPLAGIGDPVFWFTVRPILGALGASLAVSGNILGPILFFGLWNAIRMGFLWYTQE
                     FGYKSGKEITKDMSGGILQDITKGASILGMFILAVLAQRWVSIGFNFTVSEVPLSEGA
                     YIEWDKLPEGYEGIQKAFELVGQGLSQTPTKVTTFQQNLNGLIPGFMHLLLTFLCMWL
                     LKKKVSPITIIVGLFAFGIVARLFGIM"
     gene            complement(5887..6699)
                     /locus_tag="U1021_001793"
     CDS             complement(5887..6699)
                     /locus_tag="U1021_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001280330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HEM4712304.1"
                     /translation="MSDISIISAILVVVVAFLAGMEGVLDQFQFHQPIVACTLIGLVT
                     GNLTAGVMLGGTLQLVALGWSNIGAAIAPDAALASVAAAIILIKGGDFSATAISVAQG
                     LAIPLAVAGLFLTMLVRTASVALVHGADAAAERGDFGALERYHLIALSLQGLRIAVPA
                     ALLLAIPTEAVQDALESMPAWLSGGMNVGGGMVVAVGFAMVINMMATREVWPFFAIGF
                     ALAAVSQLTLIALGAIGVSLAFIYLNLSKKGGNGDGGGAGSNDPIGDILEDY"
     gene            complement(6749..7741)
                     /gene="manX"
                     /locus_tag="U1021_001794"
     CDS             complement(6749..7741)
                     /gene="manX"
                     /locus_tag="U1021_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002308759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HEM4712305.1"
                     /translation="MSIGIIIASHGEFAAGIHQSGSMIFGEQDKVQVVTFMPSEGPDD
                     LYAKLNAAVDAFDADDEILVLADLWSGSPFNQASRVAGENPDRKFAIITGLNLPMLIQ
                     AYTERMINAAAGVEEVAANIIKEAKDGVKVLPEELQPTEAAPVADVATTATQGAIPPG
                     TVIGDGKLKINLARIDTRLLHGQVATAWTPASKADRIIVASDTVAQDDLRKQLIKQAA
                     PGNVKANVVPIKKLIEVSKDPRFGNTHALILFETPQEALEAIEGGVEIKELNVGSMAH
                     STGKTMVNTVLSMDKDDVATFERLRELGVKFDVRKVPNDSPKDLFDLINKADVK"
BASE COUNT         2298 a         1624 c         1769 g         2203 t
ORIGIN      
        1 cagttggatc atctgaaact gttgaaaaag gcgctgttac agcagatgtt tatatagaaa
       61 gaggtcagta tgacatattc gcaggattat ttagatgacc ttctggtacg aatggcctat
      121 cattccagcg ggattgaggg gaataccatt tcactgcctg agacggtttc gattattttg
      181 gaaagcacgc tacctggcaa gcacaagagt atccgtgaat tttacgagat tgaaaatcac
      241 aaacaagcct tccaagctct gctatttgcc ttagataatg gggaagagct gagtttggga
      301 ctggttaagg atattcatgc cttgttgatg gaccgtctcc agcatgatcg ggggcagttt
      361 aagtcggtgc aaaacgctat tattggtgcg accttcaaga ctgcatcgcc agaggaaacg
      421 ccttttctta tgcaacagtg ggtggacaat gccaactatc gcttggggtt gcctttggaa
      481 atagctgagc tgttagaggt attggcagat gtgcatattc agttcgagcg tattcaccca
      541 tttagtgatg ggaacggtcg gacaggacgg ctgattttga tgtttcaaag tatgctcaaa
      601 ttgggagcac ccgtactgat tagtaaggaa gatcgagctc tttatatgga gttgctagcg
      661 gaacaagatg tgactggatt atcccaatta ctcaaacgct ccttggagtt tgaacaagaa
      721 cgaaaaaacc agttttaagt cgaattttca gaaagcaact ttcaattgga actattattt
      781 ttgcctgaaa atacaatgaa agccctactt tcacaactac ttggaaacag cgtaagtttt
      841 ctgatttagc agaagttcgt aggggactaa catattctcc atcagctata cgaagccacg
      901 gtgtgcgtgt gttacgttct tcaaatatta acgaagatac atttgttttt ggagaggatg
      961 atgttttcgt cgataaaagt gtagtaaaaa ttcccttagt ggaagaaggg gatatattaa
     1021 taacctctgc taatggttcg agtagattag tgggcaaaca ttctattatc aaaggtttgc
     1081 ctagtaattc cgcaatacat ggtggtttta tgttattagc atcatctaaa gtaccatgtt
     1141 ttctcaatgc atttatgagt tcaatttggt atcacaagtt tattggtttg tatgttgcgg
     1201 gaggaaatgg agcaatcgga aacttgaata agagtgacct agatgagcag attgttttag
     1261 tccccaccct ccctgaacaa gcagccatcg gcagcttctt ctccgaccta gatcagctta
     1321 ttactcttca tcagcgaaaa tgagatttcg agtaaaaaat gaaacaacat gaaaggatta
     1381 caaaaacatg tcaaaaacta ttcaagccat taccaatcag atttggtcta tggccaatga
     1441 attgcgaggg aacatggatg cttcggaata taagaactat atcctagcct tcatgttcta
     1501 tcgctaccta tctgagcatc aagagcgttt cttggtggaa gatgaaatta tcagtcctgc
     1561 tccaggagaa actgttcagg atgcctatgc acgagaagca gttgggaatg acttggtgga
     1621 gtatttggaa aatacagctt ctcaccttgg atacgcgatt gcaccagaag atacctgggc
     1681 aagactggta gccaaaattg ataacagtga gattgtagcg agtgactacc agacgatttt
     1741 cgatcatttt aacgccaatg tagaactcaa tcaggatgct atggaagatt tcagaggcgt
     1801 ctttaatgac atcaatctag gtgactctcg tttgggcaat tcaacggttg cgcgtgcaaa
     1861 atccttgaac agtattgtga agctgattga cagcattgag tataaaaatg atgaaggaaa
     1921 ggatattctg ggggaaatct atgagtatct tattggacag tttgccgctt cggcaggtaa
     1981 aaaaggtgga gaattttata ccccgcatca agtaagtaag attttagcca agattgttac
     2041 tttaggtttg gaaaaatcag atactagctt ctctgtttac gatccaacca tgggttcagg
     2101 gtctttgcta ctaacagtgc gtaatgaact acctcagggc cagcatatca aattctatgg
     2161 ccaagaaatg aacacaacta cttataactt ggcgcggatg aacctgatga tgcatcaggt
     2221 cggctacagc aatatgattt tgaataatgc tgatacctta gaaagtgact ggccggacgg
     2281 ggtggatgaa cttggaatca atcagccacg tagttttgat gcggtcgtcg caaacccacc
     2341 ctactctgct aaatgggaca atcgtgagtc caaactgaag gatccacggt ttatggaata
     2401 cggtaagtta gcaccagctt ctaaagcgga ctttgccttt atcttacaca gtctttatca
     2461 tctgaataat acagggacca tggccattgt tttaccacac ggagtgctct ttaggggagc
     2521 agcagaaggt catattcgca aactgattat tgagaaaaat tacctggatg cagttattgg
     2581 cttgccagct aacctgtttt atggcacagg cattccaacc actattctgg tcttcaaaaa
     2641 aaatcgtcag accaaggatg tcttctttat cgatgcgagc aaggagtttg aaaaagggaa
     2701 gaaccagaat cacctttccg atgacatggt agaaaaaatt gtagagacct atcacaatcg
     2761 tcagtctgtt gacaaatatg ctcatttggc atcaatagaa gaaattgtag aaaacgacta
     2821 caatctaaat attcctcgtt acgtcgatac ttttgaggaa gaggaagaga ttgatctcgg
     2881 gcaagtaacg caacaactag aacaagatag actagagatt cgggctctag aagataagat
     2941 tcgtcaacaa ttaaagactt tgggagtaga tttttagata aatgaaaaga gcgagtagaa
     3001 ttttcctcgc tctttctttg tatatcttaa ggcttaatca catcaacccc acccatgtat
     3061 ggacggagaa cttctggaat ggtgacagaa ccgtcttcat tttgatagtt ttcaaggatt
     3121 gccgcaaccg tacgacctac tgctagacca gatccgttga gggtgtggag caatttgact
     3181 ttgccgtcag cagcatcgcg gtagcggatt tgggcacggc gagcttggaa atcttctgtg
     3241 ttggaacagc tggagatttc acggtaggca ttttgggctg gaatccagac ttccaagtca
     3301 taggttttgg cagctgagaa gcccatatcg cctgtacaga gggctaaaac gcggtaaggt
     3361 aagcctagtt tttggagaat attctctgcg tttgctgtca ttttttccaa ttcatcataa
     3421 gactgctccg gtgtagcaaa tttgaccatt tcaaccttgt ggaattggtg gaggcgaatc
     3481 agaccacggg tgtcacgacc agcagaacca gcttcagaac ggaaagacgg gctcatggct
     3541 gtgaagtaga ttggcaggtc tttttcttcc aaaatctcgt tgcggtagta gtttgtcaat
     3601 ggtacttccg cagttgggat gaggacgaag ttggtatccg ccaactcaaa ggtatcttcc
     3661 ttgaattttg gatattgtcc agtaccaaac atagagtcat ggttgaccat gtaaggtgtg
     3721 atgatttcct ggtagccttc tgcgatatgc tcgtccaaca tgaagttgta gagggcacgc
     3781 tccaagcggg cacccaagtt tttgtagaag aggaagcggg caccggttac ttttgcccca
     3841 cgttcccagt ccagaatatc caagttttcg cccaagtccc agtgtgcttt tggctcgaag
     3901 gtaaattcac gcggagttcc ccaacgacga acttctacgt tttcttcttc atccgcacca
     3961 acaggaacag aatcatgtgg cgtatttgga agaacagtga gaatagcgtt caatttttca
     4021 tcgatttcca aaagctgagc gtctaagttt ttcacttccg cagacaattt ctgcatagca
     4081 gcaatcttgt catccgcatt ttccttgttg cgttttgctt gggcaatctc tgctgaaact
     4141 gtgttgcgct ctgcttttaa ttcttctaca gtgaccaaga tttcacggcg ttttgcatcc
     4201 aattccttga tgtctgccaa ggtttcggca gccacaccac gagtagctaa tttggcagcc
     4261 actccgtcaa aatctgtacg aatacgtttg atatctagca tagatgtctc ctttagaata
     4321 aaaaacacag aatgagagat gctggagcga tagttaccgc ggttccatcc agcttcacat
     4381 tctgtgcact ttaagtatgt catttttagc caacggtaga atttcatatc ccttgtttat
     4441 ctgctcacag cgaccgcaga ctttctgaaa aacgcctgat attacttatc cgtttgtttt
     4501 attatacttg attttttatt tttttgcaaa tagatttgag attttctgtc ctagaatttg
     4561 caggagagtt ggcagtttga caactttctc attgccaata tgttcacgag caatttttag
     4621 aattttacca gaatctttag aagcaaaaag gaatttgccg ctatcagtat agacttcgaa
     4681 gtggcgactg atttttctat tggaaacatt ggcaccaatc tgaatgatag atgtccaagg
     4741 gatttgaaca taattttcaa cgttgttatc agcataaaat tccagagctt gatctcctag
     4801 caggaactta ccaaccgttc cacctgcaag actgagatag gaaacgcctg ttgtggatag
     4861 ttcgacgtgt ttatttaatg attgtgccat agttacctca tttcttgttt tattatacca
     4921 taaaaccccg catgagcggg gtttcttaat ggattacata attccaaata ggcgagctac
     4981 gataccgaat gcaaacaaac caacgatgat agtgattgga gaaacttttt tcttcaacaa
     5041 ccacatgcat aggaaggtaa gaagcaagtg catgaagcct gggataagac cgttcaagtt
     5101 ttgttggaaa gtagtaactt tagttggagt ttgtgacaaa ccttgaccaa ccaattcaaa
     5161 ggctttttgg ataccttcgt agccttctgg caatttatcc cactcgatgt aagcaccttc
     5221 tgagagtgga acttcagaaa ccgtgaagtt gaagccgata gatacccaac gttgagcaag
     5281 tacagcaagg atgaacatac cgaggataga agccccttta gtgatgtctt ggaggatacc
     5341 acctgacata tctttagtga tttctttacc tgatttgtaa ccaaactctt gagtgtacca
     5401 taggaagccc atacggatag cgttccaaag accgaagaag aggattgggc caaggatgtt
     5461 acctgacaca gcaagtgaag cacctagggc accgaggata ggacgtactg taaaccagaa
     5521 tactgggtcg ccgataccag cgagaggtcc catcataccg attttcacac cttggatagc
     5581 agcatcatcg atgtcagcac cgtttgcacg ctcttcttca agggcaagtg ttacaccgac
     5641 gataggtgca gcaacgtatg ggtgggtgtt aaagaattcc atgtggcgtt taagagccgc
     5701 aatttgatct tctttcttag tgtaaagttt tttgatggct ggaaccattg tgtaagccca
     5761 acccaagttt tgcatacgct caaagttcca tgatgcttga aggaaggttg aacgccagca
     5821 aatcgcttta cgatctttta ctgaaagttg aattttttct gtcatgattg tgttcttcct
     5881 ttcttcttag tagtcttcta ggatgtcgcc gattgggtcg ttagaaccag ctccgccacc
     5941 gtcaccgttt ccaccttttt tagaaaggtt aaggtagatg aaggcaagag atacaccgat
     6001 agcaccaagt gcgataagtg tcaactggct aacagcagca agagcgaaac cgatagcgaa
     6061 gaatggccat acttcgcgag tagccatcat gttgataacc atagcgaaac ctacggcaac
     6121 aaccatacca ccaccgacgt tcataccacc tgacaaccaa gctggcatag attcaagagc
     6181 atcttgaaca gcctcagttg ggatagcaag aagaagggca gcaggaacag caatacgaag
     6241 accttgaagt gaaagggcaa tcaagtggta gcgctcaagt gcaccgaaat caccacgttc
     6301 tgcagcagca tcagcaccgt gtacaagggc aacagatgca gtacgcacaa gcattgtaag
     6361 gaaaagacct gcaacagcaa gagggatagc aagaccttga gcaactgaga tagcagttgc
     6421 tgagaagtca ccacccttga tcaagatgat agcggcagca acagaagcaa gggcagcgtc
     6481 tggtgcaatc gcagcaccga tgtttgacca gccaagggca acaagttgga gagttcctcc
     6541 aagcataaca cctgctgtaa ggttaccggt aacgagaccg atgagagtac atgcaacgat
     6601 tggttgatgg aattggaatt ggtcaaggac accttccata cctgcaagaa aggccacgac
     6661 aacgaccaaa attgcagaaa taattgaaat atctgacata gttataatcc tttcatattt
     6721 ctgataatca cacagtgtta atcagttatt atttaacatc tgccttgtta atcaagtcaa
     6781 acaaatcttt tggtgaatcg tttggaactt tacgaacatc gaatttgaca ccgagttcac
     6841 gcaagcgttc aaaggttgca acatcgtcct tatccataga aagaacagtg ttcaccattg
     6901 ttttacctgt tgagtgagcc atcgaaccaa cgttcaattc cttgatttct acaccacctt
     6961 cgattgcttc aagagcttct tgaggtgttt caaagagaat caaagcgtgt gtgttaccga
     7021 agcgaggatc tttagaaacc tcaatcagtt tcttgatagg aacgacgttt gctttaacgt
     7081 ttcccggagc cgcttgcttg atcaattgtt tacgaaggtc atcttgtgcc actgtatctg
     7141 aagcgacgat gatacggtca gctttagaag caggagtcca agcagtagcg acctgaccat
     7201 gcaagagacg agtatcaata cgagccaagt tgattttcaa cttaccatca ccgataacag
     7261 ttcctggagg gattgcacct tgtgtagcag ttgttgctac atctgctaca ggagcggctt
     7321 cagttggttg tagttcttct ggaagaacct tcacaccatc cttggcttcc ttaataatgt
     7381 ttgccgcaac ttcctccacg ccagcagcag cgttaatcat acgctctgtg taagcttgga
     7441 taagcattgg caagtttaga ccggtgatga tagcaaactt acgatctgga ttttcaccag
     7501 ctacacggct tgcttggttg aatggagaac cactccaaag gtcagccaaa accaagattt
     7561 catcatcggc atcgaatgcg tccacggcag cattgagctt agcatataaa tcatctggtc
     7621 cttcacttgg catgaaagta acaacctgta ctttatcctg ttcgccaaag atcattgaac
     7681 ctgactgatg aataccagca gcaaattcgc catgacttgc aataatgatt ccaatactca
     7741 ttattgatcc tcctaaattt ttcttgttca tgtaaaaacc attgaatggg ctttcatgtt
     7801 cgaactataa cattataaaa cgttttcagt gcatttgtca agagaaatta tgttaaaagt
     7861 gcaaaatgtt tccaaaagct aaattcccaa agta
//
LOCUS       DASFQD010000105         7877 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.106, whole genome shotgun sequence.
ACCESSION   DASFQD010000105 DASFQD010000000
VERSION     DASFQD010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7877
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.106"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            379..3204
                     /locus_tag="U1021_001795"
     CDS             379..3204
                     /locus_tag="U1021_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase"
                     /protein_id="HEM4712306.1"
                     /translation="MIPIQQHGKRWLILTLTLSTSVLALASIGASQPVVFADENLHLQ
                     SQKNTNKIEVLDWKTFSKKLSEYSSNQRQFHVLKLGFENRLGTLSTREELEEFGKNNN
                     FLVINGKVTQNIHDFPHILVMNKGDVIAHNEEDYHNQMRELRFSGNGDLHNSMEPKRI
                     HALFKIELDSNKRQLLNAAGLGTAENSLKNINGMTIYSHGLTVDNKYYEDYSKYTHNS
                     VKNINVTKERFIANDDLIHKLIESSEAMKQSSERDKVKAFVQYVANHTTYDWEAANKA
                     VQNYADINYYLGSDLFAVTERQKAMCVGFSTTAARAFNMLGLPAYVVVGKNAEGVPHA
                     TARVYYDKKWHTIDGTGFITDITDSNKHQRSAKYSEKHFSTIGEDSYDVVEAGQEPKA
                     ERNYMIIDSNYESWAMKQKTADLLLFNKEKSLVGLDHIAYVEPTYITENKKNHLLDIY
                     KALKGKVEEAKATDTDDKDDKQEGYNRVLQFVNSDIDKLSTLSKITEEEFKALENSMD
                     LARVFLGQMNAKAGKEFSEGETYQSYLKNRQKNNTNSDDDRNRNELQENQANSDEVAQ
                     NSKAASAPSVNSAQRSEELEGTTSTQETISAAPSQQTPAPKALQAKTELEDKTETSSL
                     GNTEMVSPSSETAQNTVDSKEESDAKLPYVEPSSKESSEAQVNTVSSPQVSSASPTSS
                     ETISTDVATAVSESSVVESNSAPQTSLEITPTEVAAEAPEASVVESNSAPQTSLEPTP
                     TEEVTEAPEASVVESNSASPTSAETNSTEVVVAKQEVADSLVSAPQTSSASLTLEVPK
                     NEYLDEKADATMPNGVEANTHEAVSVPTSDIRVQNVGSAAVPQPQSLSATVLREAIST
                     VEPVSVATSSQERSAVVGEVKVPASLERSNNSVKEEKVVDSNTTIENQETEKKEVLTS
                     ENVLNSLVTIWVALSTSFFMRYFSRGK"
     gene            3524..6049
                     /gene="secA"
                     /locus_tag="U1021_001796"
     CDS             3524..6049
                     /gene="secA"
                     /locus_tag="U1021_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEM4712307.1"
                     /translation="MVTNVLRSLIENDKGELRKLEKMADKVFSYADEMEALTDEQLQA
                     KTAEFKERYNNGESLDDLLYEAYAVVREGARRVLGLYPYKVQVMGGIVLHNGDVPEMR
                     TGEGKTLTATMPVYLNALSGQGVHVVTVNEYLSTRDATEMGELYSWLGLSVGINLAAK
                     SPLEKREAYNCDITYSTNSEIGFDYLRDNMVVRAEDMVQRPLNYALVDEVDSILIDEA
                     RTPLIVSGAQGSETNQLYFLADNLVKSLTTEDYIIDIPSKTIGLSDSGIDKAEKFFKL
                     DNLYDIENVAITHFLDNALRANYIMTYDIDYLVNEDQEVMIIDPFTGRTMEGRRYSDG
                     LHQAIEAKEGVPVQNESKTSASITYQNLFRMYKKLSGMTGTGKTEEEEFREIYNIRVV
                     PIPTNRPIARVDHEDLLYPSLEYKFNAVIADVKRRYEKGQPVLVGTVAVETSDLISQK
                     LVAAGVPHEVLNAKNHYREAQIIMNAGQRGAVTIATNMAGRGTDIKLGPGVRELGGLC
                     VIGTERHESRRIDNQLRGRSGRQGDPGESQFYLSLEDDLMKRFGSERIKVFMERMNLT
                     EEESVIKSKMLTRQVESAQKRVEGNNYDSRKQVLQYDDVMREQREIIYRQRHDVITAD
                     RDLAPEIKAMMKRTIERQVAGHFLGSKDEAIDGIIKFAHANLVDDDTLSKATFEAMNQ
                     KEIVEELYERALRVYDSQVKKLRDEERVREFQKVLILRVVDNKWTDHIDALDQLRNAV
                     SLRGYAQNNPIVEYQSEAFTMFNDMIGAIEFEVTRLMMKAQIHDNIERERTSQEAHTT
                     AVKNIMPNQSHAMQENVSFEGVDRNDPCPCQSGKKFKNCHGRK"
     gene            6164..6523
                     /locus_tag="U1021_001797"
     CDS             6164..6523
                     /locus_tag="U1021_001797"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEM4712308.1"
                     /translation="MIVGHGIDLQEMEAIESARIKHQGFPKKILTEKEFERYQSLSGR
                     RQLEYLAGRWSAKEALTKALGRGIGKIGFHDIEILNTSKGVPYVTKSPFDGNIWLSIS
                     HSGNFVQASVILEEKDD"
     gene            6516..7619
                     /locus_tag="U1021_001798"
     CDS             6516..7619
                     /locus_tag="U1021_001798"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011226530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEM4712309.1"
                     /translation="MIESEHRPTQIRVNLDAIAENFEQVMTNLPPKTEAFAVVKANAY
                     GHGAVAVAKKLSSQAAGFCVSNLDEALELRKVGIEHPILILGVVPVRFLPVAHQLNIS
                     VTVASLDWLQDAKDLEADLSGLTVHLKLDTGMGRIGFRKIADLLQAIAILEELEYDIE
                     GVYTHFATADEVDQAHFESQLSVFKEFLDVLPITPRWIHASNSATSIWHADTVFNLVR
                     LGNILYGLNPSGRVLELPFDVQPALSLVSEIVHVKQVEAGTTIGYGATYHSTDSEWIA
                     TVPIGYADGLVRSLQGLSVLVDGQACEIVGRISMDQITIRLPHAYPLGQKVTLIGQDG
                     DKTISVQEWADRIGTINYEVVCLLTDRLPRIFE"
BASE COUNT         2493 a         1403 c         1744 g         2237 t
ORIGIN      
        1 tcttcaattt aagcttttga gccgaaacag ctcctcaaaa actaacgatg actataaaag
       61 attagagttt gccattgttg gagttcatcg ggtatgaaaa agagaaacga gttccacaac
      121 ttttgatgat tattcataag caaggttgaa aatcttttta ttggtgatag tgtagtgata
      181 ttttttaacc agaggaaagt tgttgtttct caattgtatg aaaacgctat atctaaagta
      241 atgatgctga gacactaaag tctataaaaa caggaaaagc acagatagat agcagaaaaa
      301 agatagttaa aagtgttaca attggggtgc aaattttagg ctgggaaatt attctcagaa
      361 gtattatatg gaggacttat gattccaatt caacagcatg gtaagcgctg gcttattttg
      421 acacttaccc tttctacttc agttcttgcg cttgcatcta tcggagcatc acaaccggtt
      481 gtttttgcag atgaaaactt acatttacaa tcacaaaaaa acaccaataa aatagaggtt
      541 ctggactgga aaacattttc taaaaaattg agcgaatact cctcgaacca acgacaattt
      601 catgttttga aattgggatt tgaaaatcgt cttgggacat tatcaactcg ggaagaattg
      661 gaagaatttg gtaaaaacaa caattttttg gtaatcaatg gtaaagttac tcaaaatatt
      721 catgactttc cacatatcct tgttatgaac aagggtgatg ttattgcaca taatgaggaa
      781 gattatcata atcagatgag agagttgagg ttttcgggca atggcgactt acataatagt
      841 atggagccaa aacggattca tgcactattt aagattgaac ttgactccaa taaacggcag
      901 ttattaaatg ctgcgggtct aggaactgct gagaatagtt tgaaaaatat taatggaatg
      961 actatttact cgcatggtct tacagttgat aataagtact atgaggatta tagtaaatat
     1021 actcataatt cagttaaaaa tataaacgtt accaaagagc gttttatagc aaatgatgac
     1081 ttgattcata agttgataga gtcctcagaa gctatgaagc aatcaagtga acgcgataaa
     1141 gttaaggcat ttgttcagta tgttgccaat catacaacat atgattggga agctgctaat
     1201 aaggctgttc aaaattatgc agacatcaat tactacttag gatcagattt gttcgcggtt
     1261 actgaacgtc agaaagcgat gtgtgtaggt ttcagcacta ctgcggcccg tgcatttaat
     1321 atgttagggc ttcctgctta tgttgttgtt gggaaaaatg cagaaggagt cccgcatgct
     1381 acagcgcgtg tttattatga taaaaagtgg cacaccattg acggtacagg ttttattaca
     1441 gatattactg attctaataa gcatcagcgc tcagctaaat atagtgaaaa acacttttct
     1501 actatcggtg aagatagtta tgatgttgtt gaggcaggac aggagcctaa ggcggagcgt
     1561 aactacatga ttattgatag taattatgag agttgggcta tgaaacaaaa aacagcagac
     1621 ttactgttgt tcaacaaaga aaagtccttg gttggtttgg atcatattgc atatgttgag
     1681 ccaacttata taacagaaaa taagaaaaat catttgctag acatctataa agctttgaaa
     1741 ggtaaggtag aagaagcgaa agcaacggat acagatgata aagatgataa acaagagggg
     1801 tataatcgtg ttttacaatt tgtcaattct gatattgata aattgagtac tctctccaag
     1861 attacggaag aagaatttaa agcactcgaa aattcaatgg atttagctcg agtgttcttg
     1921 gggcaaatga atgcgaaggc tggaaaagaa ttttcggaag gagaaactta tcaaagttat
     1981 ctaaagaatc gtcagaaaaa taacacaaat tcggatgatg atagaaaccg aaatgaattg
     2041 caagaaaacc aagctaattc tgatgaagtc gcccaaaatt ccaaggctgc ttcagctcca
     2101 agtgttaatt ctgcacagcg atcagaggag cttgaaggaa ctacttcaac acaggaaaca
     2161 atctcagctg ctccttctca acaaacacca gctcctaagg cactacaagc taaaactgag
     2221 ttagaggata aaacagagac ttcatcttta ggaaatacag agatggtttc accgagttca
     2281 gaaacagctc agaatacagt tgattctaag gaagaaagtg atgctaaatt accatatgtt
     2341 gagccttcat ccaaagaatc gagtgaagcg caggttaata cagtttcctc tccacaagta
     2401 agttcagcat ccccaacttc atcagaaact atttctacag atgtggcaac agcagtatcg
     2461 gaatcaagtg tagttgagag taattcagca cctcaaactt cattggaaat aactcctaca
     2521 gaggtggcag cagaagcacc ggaagcaagt gtagttgaga gtaattcagc acctcaaact
     2581 tcattggaac caactcctac agaggaggta acagaagcac cggaagcaag tgtagttgag
     2641 agtaattcag catccccaac ttcggcggaa actaattcta cagaggtggt ggtagctaaa
     2701 caagaagtag ctgactcact ggtttctgct ccacaaacaa gttctgcttc acttacttta
     2761 gaggttccta aaaatgaata tttagacgag aaagcagatg caactatgcc aaatggagtt
     2821 gaagcaaata ctcatgaggc agtttctgtt ccgacatcag atattcgtgt tcaaaatgtt
     2881 ggttcagccg cggtgcctca acctcagtct ttatctgcta cagtacttag agaagcaatt
     2941 tcaacagttg agcctgtaag cgttgcaact tcttctcaag agagaagtgc agtagttggt
     3001 gaggtgaaag tgcctgcctc tcttgaacgt agtaacaatt ctgttaagga agaaaaagtg
     3061 gtagattcaa atacaacaat tgagaatcaa gagacagaga aaaaagaggt ccttacttcg
     3121 gaaaatgtac ttaatagctt agtaacaatt tgggtagctt tatctactag tttcttcatg
     3181 agatattttt ctcgaggaaa ataatatatt aacacaggtt aaagatgacg tttatctttg
     3241 tgtagaaaat tattcatgtg agcttttatt aattgaataa tatgataact gagcttttaa
     3301 tgaatttcta aatctccgat atatcgcaga ttcctcattt aaaattttat aaatttttca
     3361 cctcctagga gttattgtga ctaggaggtg ttttgtggta aaaatagtaa tattaagcta
     3421 gcattttcac ttatttaggc tgtatcctag tgccaaacct tgaaaattgc ctaattttct
     3481 gctacaatat gttattgact aaaactgaaa taggatgaat gatatggtaa caaatgtact
     3541 tcgttctctc attgaaaatg ataagggaga gctaagaaaa cttgagaaaa tggcagacaa
     3601 ggtcttctcg tatgccgatg aaatggaagc gctgactgat gaacagttgc aagctaagac
     3661 agcagaattt aaggagcgat acaataacgg tgaatccctc gacgatcttt tgtacgaagc
     3721 ttatgcggta gtccgtgaag gagctcgtcg cgtattgggc ctctatccct acaaggttca
     3781 ggttatggga ggaatcgttc ttcacaacgg tgacgttcca gaaatgcgta caggtgaagg
     3841 taaaactctg actgcaacga tgcctgttta tttgaatgcc ttgtctggtc aaggtgttca
     3901 cgtagtgacg gttaacgagt atctttctac tcgtgatgcg actgaaatgg gtgaattgta
     3961 ttcatggctt ggtctatcag ttggtatcaa cttagctgct aaatcaccct tggaaaaacg
     4021 tgaggcctat aactgcgata ttacttattc gaccaactca gagattggtt ttgactacct
     4081 ccgagacaat atggttgttc gcgcagaaga catggttcaa cgtcctctca attatgcctt
     4141 ggtcgatgaa gttgactcaa tcttgattga cgaagctcgt acgccgttga ttgtatctgg
     4201 tgcacaaggt tctgaaacaa accagttgta tttcttggca gacaatcttg ttaaatcttt
     4261 gacaacagaa gattacatca ttgacattcc atctaagacg attggtctgt ctgattcagg
     4321 tattgacaaa gcagagaaat tcttcaagtt agataacctc tacgatattg aaaatgtagc
     4381 cattacccat ttcttggata atgcacttcg tgccaactac attatgacct atgatattga
     4441 ctatctggtc aatgaagacc aagaggtcat gattattgat ccatttacag gtcgtacgat
     4501 ggaaggtcgt cgttattctg atggacttca ccaagccatc gaagctaagg aaggtgtacc
     4561 ggttcaaaac gagtctaaga caagtgcctc tattacctac caaaaccttt tccgtatgta
     4621 taaaaaatta tcagggatga cgggtactgg taaaacagaa gaggaagaat tccgtgaaat
     4681 ctacaacatc cgtgtcgtac caatcccaac caaccgccca atcgcgcgtg ttgaccacga
     4741 agatttactc tacccaagtc tagaatacaa attcaatgcc gttattgctg atgtgaagag
     4801 acgctatgag aaagggcaac ctgtcttggt cggtacagtt gcggttgaaa cttctgattt
     4861 gatttctcaa aaattggtag ctgcaggtgt ccctcacgaa gtattgaatg ctaaaaacca
     4921 ctatcgtgaa gcgcagatta ttatgaatgc tggtcagcgt ggtgcggtca ctattgcgac
     4981 caacatggcg ggacgcggta ccgatattaa gttaggtcca ggtgtacgtg aacttggtgg
     5041 gctatgtgtt attggtactg agcgccatga aagtcgtcgt attgataacc agcttcgtgg
     5101 acgttcaggt cgtcaaggtg acccaggtga atcacaattc tatctatctc tcgaagatga
     5161 cttgatgaaa cgctttggtt cagaacgcat caaagtattt atggagcgta tgaatctaac
     5221 agaagaagag tccgttatca agtctaaaat gttgacacgt caagttgaat ctgctcagaa
     5281 gcgtgtggaa gggaacaact acgattcacg taaacaagtc cttcaatatg acgatgtgat
     5341 gcgtgagcaa cgtgaaatca tctatcgcca acgccatgat gttattactg ctgaccgtga
     5401 tttggctcct gaaatcaaag caatgatgaa acggacgatt gaacgccaag ttgctggtca
     5461 cttccttggt tcgaaagatg aagctattga tggaattatc aaatttgcgc atgcaaatct
     5521 cgttgacgat gataccttga gtaaagctac ttttgaagca atgaatcaga aagagattgt
     5581 cgaagagctc tatgaacgtg ctttgagagt ctatgattcg caagtgaaaa aattacgcga
     5641 tgaagaacgt gtacgcgaat tccagaaagt tcttatcctt cgtgttgtgg ataacaaatg
     5701 gacagaccat attgatgcct tggatcaatt gcgcaatgca gtcagtcttc gtggatacgc
     5761 tcaaaacaat ccaatcgttg aatatcaatc agaagcattt actatgttca acgatatgat
     5821 tggggctatc gagtttgaag taacccgctt gatgatgaag gcgcaaattc atgacaatat
     5881 tgagcgtgag cgcacaagtc aagaagcaca tacgacagct gttaagaata ttatgccgaa
     5941 ccaatcgcat gcaatgcagg agaatgtatc ttttgaaggt gttgatcgta atgatccatg
     6001 cccatgccag tctggtaaga aatttaaaaa ttgtcacggc cgtaaatagg aatgacgcgt
     6061 ggactggacg gctgtccagt ccttttgcaa tttttagaca agtcactaga gtcagttcgt
     6121 ttatgttaat aaatgaaatg gctatgcaaa aggagaccga ttaatgatag taggacatgg
     6181 cattgacctt caggagatgg aggcgattga aagtgccaga atcaaacacc aagggtttcc
     6241 caaaaagatt ctcacagaga aagaatttga acggtatcaa agtctgtccg gtcgccgtca
     6301 gttagaatat ttagctggac gttggtcagc caaagaagcg ctgaccaagg ccttggggag
     6361 aggtattggt aagataggat ttcatgatat tgaaattctg aataccagca aaggagttcc
     6421 ctatgtgacg aagagtccct ttgatgggaa tatttggctc agcattagcc attcaggaaa
     6481 ttttgtacaa gctagtgtga ttttggagga gaaagatgat tgaaagtgaa catcgaccca
     6541 cgcaaattcg ggttaactta gatgcgattg cggaaaattt cgagcaagta atgaccaact
     6601 taccccctaa gactgaagca tttgctgttg ttaaggcgaa tgcttatggt catggagctg
     6661 ttgcggtagc gaaaaagtta tctagtcaag cagctggttt ttgtgtttcg aatttggatg
     6721 aagcattaga gttacgtaaa gtaggtatcg agcatcctat cttgatttta ggagtggttc
     6781 ctgtacgttt tttaccagta gctcatcaac tcaatatcag tgtgacagtt gccagtctgg
     6841 actggttgca agatgcaaaa gacttagagg ctgatttatc tggtctaact gtccatctta
     6901 agctagatac tggcatgggg cggattggtt ttagaaaaat agctgatttg ctacaagcga
     6961 ttgctatcct tgaagaatta gagtatgaca ttgaaggagt ctatactcat tttgctactg
     7021 cggatgaggt tgatcaggcg cacttcgaga gtcaactgtc tgtttttaaa gaatttttgg
     7081 atgttctacc aattactccg cgctggattc atgccagcaa ttcagcaaca agcatttggc
     7141 atgctgatac agtatttaac ctggttcgtt tgggaaacat tctttatgga cttaatccaa
     7201 gtggacgagt actagaactc ccgtttgatg ttcaaccagc tttatctctc gtatctgaaa
     7261 ttgttcatgt aaaacaggtt gaagctggca caacaattgg ctacggagct acttatcaca
     7321 gcaccgattc agaatggatt gcgaccgttc cgataggata tgcagatggt ctcgtacgaa
     7381 gcttacaagg tttatcagtc ttagtcgatg ggcaggcctg tgaaattgta gggcgtattt
     7441 cgatggacca gatcaccatt cgcttaccgc atgcttatcc acttggtcaa aaagtcaccc
     7501 taatcggtca agatggagat aaaacgatct ctgttcagga gtgggctgat cgcatcggaa
     7561 ccataaatta cgaggtggtt tgtcttttga cagatcgcct acctcgaatt tttgaataac
     7621 agcgatggta aaagtgacga taatccgcct ttttcactag aatagaaagc taaaatatta
     7681 gagaggtatt acctagagat tgtctataat acaaatatcg tcatttagtt gacttttatt
     7741 actgcgacgt acggaggctg ggcaaaaagc ccaggaccac tactcagagt tcgtgtcaac
     7801 atatcagcgc agtggttgat tggcagattt gttcgtgttt tgcactccaa atctggcctc
     7861 tacgactgat gcgaaca
//
LOCUS       DASFQD010000106         7725 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.107, whole genome shotgun sequence.
ACCESSION   DASFQD010000106 DASFQD010000000
VERSION     DASFQD010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7725
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.107"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(68..388)
                     /locus_tag="U1021_001799"
     CDS             complement(68..388)
                     /locus_tag="U1021_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1292 domain-containing protein"
                     /protein_id="HEM4712310.1"
                     /translation="MAHHHDHEHDHNHDERELITLVDDQGNETLFEILLTIDGQEEFG
                     KNYVLLIPASAEEDENGEVEIQAYSYIENENGTEGDLQPIPEDATAEWDMIEEVFNSF
                     MEEE"
     gene            complement(400..819)
                     /gene="ruvX"
                     /locus_tag="U1021_001800"
     CDS             complement(400..819)
                     /gene="ruvX"
                     /locus_tag="U1021_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEM4712311.1"
                     /translation="MRIMGLDVGSKTVGVAISDPLGFTAQGLEIIPINEEKGEFGLER
                     LTELVEQYKVDKFVVGLPKNMNNTIGPRVEASQAYGDLLTERYKLPVDYQDERLTTVA
                     AERMLIEQADISRGKRKKVIDKLAAQLILQNYLDRTF"
     gene            complement(819..1085)
                     /locus_tag="U1021_001801"
     CDS             complement(819..1085)
                     /locus_tag="U1021_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002885737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IreB family regulatory phosphoprotein"
                     /protein_id="HEM4712312.1"
                     /translation="MGFTEETVRFRLDDTDKQEISKTLTSVYRSLEEKGYNPINQIIG
                     YVLSGDPAYIPRYNDARNQIRKHERDEIIEELVRYYLKGNGIDL"
     gene            complement(1185..1583)
                     /gene="spx"
                     /locus_tag="U1021_001802"
     CDS             complement(1185..1583)
                     /gene="spx"
                     /locus_tag="U1021_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017768833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator Spx"
                     /protein_id="HEM4712313.1"
                     /translation="MIKIYTVSSCTSCKKAKNWLNAHQLSYNEHNLAKEAITKEEILN
                     ILTKTENGIASIVSSKNRYAKSLDFDIEELSVNEVIDLITSNPRILKSPILIDEKRLQ
                     VGYKEDDIRAFLPRAVRNVENAQARMRAAL"
     gene            complement(1819..2970)
                     /gene="recA"
                     /locus_tag="U1021_001803"
     CDS             complement(1819..2970)
                     /gene="recA"
                     /locus_tag="U1021_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001085741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEM4712314.1"
                     /translation="MAKKPTKKLEDITKKFGDERKKALDDALKSIEKDFGKGAVMRLG
                     ERAEQKVQVMSSGSLSIDIALGAGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKDGG
                     IAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSV
                     AALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTVAIFINQLREKVGVMFG
                     NPETTPGGRALKFYASVRMDVRGNTQIKGTGDKKDQNVGKETKVKIVKNKVAPPFKEA
                     VVEIMYGEGISRTGELIEIGSNLGIIQKAGAWYSYNGEKIGQGSENAKKFLADNPAIF
                     DEIDRKIRVHYGLIEADGVEEVATEEAPVVAEEIQDVILDLDGGIELED"
     gene            complement(3022..4203)
                     /locus_tag="U1021_001804"
     CDS             complement(3022..4203)
                     /locus_tag="U1021_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HEM4712315.1"
                     /translation="MKAELIAVGTEILTGQIINTNAQFLSEKCAELGIDVYFHTAVGD
                     NEQRLLSVLEVAGKRSEIVILCGGLGPTEDDLTKQTLAAFLGRNLVFDELAMAKLDRF
                     FASRPGRVRTPNNERQAQIVEGSQALQNPAGLAVGGMIEQDGVTYIVLPGPPSELKAM
                     FSESLLPLLSQSQQQLYSRVLRFFGIGESQLVTVLADLIDKQTDPTLAPYAKVGEVTL
                     RLSTKATSQEEANLRLNQLEEKILQHDKLREYFYAYGEENSLVQTVAERLVEKNKSIA
                     IVEQGTGGLLQAELSLALADQPYFSGGKVIGQLGTESGRLSEEADCIRQELQADLGLA
                     VSVLIKPESTEDNVLAKVYLTLATTSGISQKEIDLGGYSWQYLRQLACLQAWDFVRNT
                     L"
     gene            complement(4240..4809)
                     /locus_tag="U1021_001805"
     CDS             complement(4240..4809)
                     /locus_tag="U1021_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEM4712316.1"
                     /translation="MSRCAWVNPNNPLYIAYHDEEWGNPLHDEQALFELLCLESYQAG
                     LSWEIVLNKRQAFCSAFFNYDIQKVATMTDSELDSLLTNPDIIRHKAKLYATRANAQA
                     FLRVQEEFGTFDTYLWEWVNFTSIDNPVKSFRELPTKNDLSERISKDLKKRGFKFVGP
                     VCIYSYLQAAGLLNEHEETCEIGKKLRTN"
     gene            complement(5063..5653)
                     /gene="ruvA"
                     /locus_tag="U1021_001806"
     CDS             complement(5063..5653)
                     /gene="ruvA"
                     /locus_tag="U1021_001806"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000271492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEM4712317.1"
                     /translation="MYDYIKGILTKITAKYIVVETHGVGYILQVANPYAYSGQVQQEV
                     TVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGIGPTTALAIIAVDDNDGLVRAIE
                     QKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQQVAPSSENIALDEAMEAME
                     ALGYRPAELKKIKKFFEGTNDTAENYIKSALKMLMK"
     gene            complement(5692..7629)
                     /gene="mutL"
                     /locus_tag="U1021_001807"
     CDS             complement(5692..7629)
                     /gene="mutL"
                     /locus_tag="U1021_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEM4712318.1"
                     /translation="MSHIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIE
                     ISVEEAGLKMIQITDNGEGIAPDEVALALRRHATSKIKNQSDLFRIRTLGFRGEALPS
                     IASVSHMIIETATADSAHGLHLEAKGGVIEKEEPVSRPVGTQITVSDLFYNTPARLKY
                     VRSQQAELSHIVDVVNRLSLAHPEIAFALVNEGRELIRTAGTGKLRQAISGIYGIASA
                     KKMVEIEAEDLDFQISGYVSLPELTRANRNYISIFINGRYIKNFLLNRVILEGYGSKL
                     MVGRFPLAVISIEIDPYLADVNVHPTKQEVRISKEKELMTLIREAISQALKEQDLIPD
                     ALENLAQSSTRPKVKAEQGTLPLREPKIYYDTIKQDFFLKPDVVAEDVKPLEEDRQEI
                     VESPVENKPTSVQFAERQTAESTDPEHPNLSTKELAKLADKLDQEETSTFPELEYFGQ
                     MHGTYLFAQGKTGLYIIDQHAAQERVKYEYYREKIGQVDNSAQQLLVPYIFEFPQNDA
                     LDLVHKMDAFRQVGVNLEEYGANQFILREHPIWMKEEEIESGIYEMCDMLLLTDQVSI
                     KQYRAELAIMMSCKRSIKANHALDDYSARDLLRQLSYCQNPYNCPHGRPVLVHFSKSD
                     MEKMFRRIQENHTSLRELGKY"
BASE COUNT         2094 a         1822 c         1425 g         2384 t
ORIGIN      
        1 agatccactg gaccttaatt cgctttcttg ttttcaggct catgataaaa aggtccactg
       61 gaccttttta ttcctcttcc ataaagctgt tgaagacttc ttcaatcata tcccattctg
      121 ctgttgcgtc ttctgggata ggttgcaaat cgccttctgt gccattctca ttctcgatgt
      181 atgagtaggc ttggatttca acttctccgt tctcatcttc ttctgcactt gcaggaatca
      241 agagaacata gttcttacca aactcttctt gaccgtcaat cgtcaataag atttcaaaaa
      301 gtgtttcgtt accttggtcg tctaccaaag taatcaattc acgttcgtcg tggttgtggt
      361 cgtgttcatg gtcatgatga tgtgccatta gaatctcctt taaaatgttc tatctaaata
      421 attttgtaaa atcagctgag ctgctaattt atcgataact ttcttgcgtt ttcctcggct
      481 gatatccgct tgctcaatca gcatccgttc tgctgcaaca gttgttaaac gttcatcctg
      541 ataatcaact ggaagtttat aacgctcagt caataaatca ccgtaagctt gactagcttc
      601 cacacgtgga ccaatagtat tattcatatt cttcggcaag cctacaacaa atttatcaac
      661 cttgtactgt tctacaagtt cggtcaaacg ctccagaccg aattcgccct tttcttcatt
      721 gattgggatg atttccaacc cttgggccgt gaaacctaac ggatctgaaa tggctacacc
      781 aactgtcttg gaaccgacgt ctaatcccat tattctcatt agaggtcaat cccattccct
      841 ttcaaatagt agcgcaccaa ttcttcaatg atttcatctc gttcatgctt acgaatctga
      901 ttgcgagcat cattatagcg aggaatataa gcagggtccc cacttaatac atagccaatg
      961 atttggttaa tcggattata gcccttttcc tctagcgaac gataaacact agtcaatgtt
     1021 ttgctgattt cttgtttatc tgtatcatct aggcgaaaac gaacggtttc ttcggtaaat
     1081 cccatactta caccttcttt ccctattttt tacattatat cacaaatttt aattattctc
     1141 aaaaaatgcg caaaaagaac cccaaaagag tccttttgta catcttatag agctgctctc
     1201 atacgagctt gagcattttc aacattgcgc actgcacgtg gcaagaaagc gcgtatatca
     1261 tcttctttat agcccacttg aagtcgtttc tcatcaatca agattggact cttcaaaata
     1321 cgtgggttag aggtaattaa atcaatgacc tcgttcacac tcaactcttc aatatcaaag
     1381 tccagactct ttgcataacg gttttttgac gatacgatac ttgcaatacc attctctgtt
     1441 tttgttaaga tgtttaggat ttcttcctta gtaatggctt ccttcgcaag attatgctca
     1501 ttataagata attggtgagc atttaaccaa tttttcgctt tcttacaaga agtacaacta
     1561 gatacagtat aaattttaat catgtagtca ctcctttgct acattttatt aagcacatta
     1621 tagactatta tatcataaat tccctcggtc tgcagaccta ttttttaaaa aaactttaaa
     1681 ttttggggta aaaattcggt ttttattaga aaaaagcctg gaatctccag actttttcgt
     1741 tcttatacta aacaacttcg tacataccta taacagatac gcaccaatag ttcaatatta
     1801 aatctatttt gttaggaatt aatcttctaa ttcaataccg ccatcaagat ctaggataac
     1861 atcttggatt tcttccgcaa caacaggagc ttcttcggtc gcaacttctt caactccatc
     1921 tgcttcaatc aagccataat gaacacgaat cttgcggtca atttcatcaa agattgctgg
     1981 attatctgct aagaatttct tagcattttc agaaccttgg ccaatttttt ctccattata
     2041 tgaataccaa gcacctgctt tttggatgat gccgaggttg ctaccaatct caatcaattc
     2101 acctgtgcga gaaattcctt caccgtacat gatttcaaca acagcttctt taaatggtgg
     2161 cgccaccttg ttcttcacga tcttcacctt ggtttcctta ccaacgtttt gatctttctt
     2221 gtcgcctgtt cctttgattt gtgtgtttcc acgaacatcc atacgaacag atgcatagaa
     2281 tttaagcgca cgtccaccag gggttgtttc agggttacca aacatgacac cgactttttc
     2341 acgcaattgg ttgatgaaaa tagctactgt cttagttttg ttgatggatg caccgagttt
     2401 gcgcatggcc tgactcatca tgcgagcctg caaaccaaca tgactatcac caatatcgcc
     2461 atcaatttct gcacgtggta caagggctgc aaccgagtca acaacaacca aatcaaccgc
     2521 accagagtcg atcagcttgc ctgcaatttc aagaccttgt tcccctgagt ctggctggga
     2581 caagagtaac tcatcaatat tgacaccaag agctgctgca taggctggat ccaaggcatg
     2641 ctccgcatcg ataaaggcag caataccacc atctttctgg gcttgagcta ctgcgtgtag
     2701 agcaacagtt gtcttacctg agctctctgg accgtaaatc tcaatgatac gacctttcgg
     2761 atagccaccc gctccaagcg caatgtcgat tgacaaacta cctgagctca tgacttgaac
     2821 tttttgttca gcacgctcac caagacgcat aacagcaccc ttaccaaaat ctttttcaat
     2881 tgattttagg gcatcatcca gcgctttttt acgctcatcg ccaaatttct ttgtaatatc
     2941 ttctaatttc ttagttggtt tcttagccaa tgattttctc ctcttttctt agtcaaacta
     3001 ttatagcaaa tatctgctat ttcacaaagt gtttcgtaca aaatcccagg cctgcagaca
     3061 agcaagctgg cgaaggtatt gccacgaata accacctaaa tctatctctt tttgggaaat
     3121 acccgaggtc gtagccaaag tgagatatac ttttgcaagt acgttgtcct ctgttgattc
     3181 cggtttgata agcacagaca cagccaaacc caaatcagct tgcagctcct gccgaatgca
     3241 gtcagcttcc tctgatagcc tgcccgattc tgtccctagc tgaccgatga cttttcctcc
     3301 gctaaaatac ggctgatcag ccaaagccag gctcaattca gcttgcaaga gaccacctgt
     3361 cccctgttcg acgatggcta tgcttttatt cttttccacc aatcgctctg ctactgtctg
     3421 taccagacta ttttcctcac cgtaagcata gaaatattct ctcagtttat catgttgtaa
     3481 gattttttct tccaactgat tcaaacgtag atttgcctct tcttggctgg tcgctttggt
     3541 ggacaagcgt aaagtcacct ctccaacttt tgcataagga gcaagagttg ggtctgtctg
     3601 cttgtcaatc aagtccgcca aaacagtcac taactggctt tcaccaatgc caaaaaaacg
     3661 taggacacgc gaataaagtt gctgctgaga ttgggacagt aaaggtaaga gactctcaga
     3721 aaacatggcc ttgagctcac ttggtgggcc aggcaaaaca atataggtta caccatcttg
     3781 ctcaatcata ccaccaacag ctaaaccagc tggattctgt agcgcctgac ttccctccac
     3841 aatctgtgcc tgacgttcat tatttggtgt acggacacga cctgggcgac tggcaaagaa
     3901 acggtctaat tttgccatag ccaactcatc aaacacaaga tttctaccta agaaggctgc
     3961 caaggtctgc ttagtcaagt catcttctgt tggccccagt cctccacaga gaataactat
     4021 ctcactacgc ttgccggcta cctccagtac agacaaaagc ctctgttcat tatctccaac
     4081 agctgtgtgg aagtaaacat caattcccag ctctgcacat ttctccgaaa ggaactgagc
     4141 attggtatta atgatttgtc ctgtcaaaat ctctgtaccc acagcgatta gttctgcttt
     4201 catattcctc ctctgtctag ggtgcgattg ctcgctcatc taattagttc gtaatttctt
     4261 tccaatctcg caagtttctt catgttcatt caacagacct gcagcctgca aataggagta
     4321 aatacagaca ggccctacaa acttgaaacc tcgtttcttc aaatcttttg aaatccgctc
     4381 agacaagtcg ttcttggtcg gcaattctcg gaaggacttg acagggttgt cgatagatgt
     4441 aaagttaacc cattcccaaa gatacgtatc aaacgtaccg aattcctcct gtactcgaag
     4501 aaaggcctga gcattggcgc gggtagcgta cagctttgcc ttatgacgaa tgatgtctgg
     4561 attggtcaga aggctatcta actcgctatc tgtcatggtc gcaacctttt gaatatcata
     4621 gttgaaaaaa gcagagcaaa aagcctggcg tttattgaga acaatttccc aggaaagtcc
     4681 tgcttggtag gattccaagc aaagtaactc aaacagagcc tgctcatcgt gaagcggatt
     4741 gccccattct tcatcatggt aagcaatata aagtggattg ttgggattga cccaagcaca
     4801 acgggacata gaaactcctt ttcgtgaata actaaagtgc gaatcaggat aaactgactg
     4861 aaacacggct acgatacttt gtaaaattgt caaactgaat cctaaatatc accgaataac
     4921 gcagttgaca tctggcaaaa ggcttcgtca aaactcgcct tttacctagt tgtcattgcg
     4981 gaggtctcac aacgaaattt ctagcaaaat ttctgttcgg ccgtctattt tgctttgtat
     5041 cgcttaacgc cttagtatcc tattacttca tcagcatttt aagggctgac ttgatgtagt
     5101 tttctgcggt gtcgttggtg ccttcaaaga atttcttgat tttcttgagt tcggctggtc
     5161 ggtagccaag agcttccatg gcttccatag cttcatcaag agcgatattt tcactggatg
     5221 gtgctacttg ttgaacagga cccgcttctt cgctcatgac aaacttgcct tccaagtcca
     5281 aaatcatctg ctgggctgtt ttcttgccaa tctttggaaa cttggtcagg taggtaatgt
     5341 ttttctgctc aatagcacga acaagtccat cattatcatc aacagcaata atagccagag
     5401 ctgttgttgg cccaatacct gatactgaaa tcagactcag aaagacggat ttttcatttt
     5461 ctgtagcaaa tccgtagagc aaatgagcgt cttcacgaat cacctgatga gtatagacag
     5521 tcacttcttg ctgaacttgt cctgaatagg cgtagggatt agcaacctgc aagatatagc
     5581 ctactccatg cgtttctacc acaatgtatt ttgcagttat ttttgttaaa attcctttaa
     5641 tatagtcgta catatacttc ctttactaat gtgtcaactt tttcaactat gttaatactt
     5701 gcccaattca cgcaaactcg tgtgattttc ttgaatgcga cggaacattt tttccatatc
     5761 cgatttgcta aaatgtacta agactgggcg gccgtgcggg cagttatagg gattttggca
     5821 gtaagacaat tgtctcaata aatcacgcgc cgaataatca tccaaggcat gattggcctt
     5881 gattgaccgt ttacaagaca tcatgatggc cagttctgcc cgatactgct tgattgacac
     5941 ctgatccgtc aagagcaaca tgtcgcacat ctcataaatg ccagactcaa tctcctcttc
     6001 cttcatccaa ataggatgtt cacgcagaat aaattgatta gctccatatt cttctaagtt
     6061 gacaccaact tgacggaagg catccatttt gtggacaagg tcaagggcat cattctgcgg
     6121 aaattcaaaa atatacggca ccaataactg ttgagctgaa ttgtcaacct gaccaatttt
     6181 ctcacgatag tattcgtatt tgacccgctc ttgtgcggca tgctggtcaa tgatatacag
     6241 tcctgttttt ccttgtgcaa aaagataggt gccgtgcatt tgaccaaaat attccaattc
     6301 tgggaaggtt gaggtttctt cttggtctag tttgtctgct aatttggcca actctttagt
     6361 actcaagtta gggtgttctg ggtctgtact ttcagctgtc tggcgttctg caaattgaac
     6421 agaggtaggt ttattttcga caggcgactc aacaatctct tgcctatcct cttcgagagg
     6481 tttgacatcc tcagcgacaa catctggttt taaaaagaag tcttgcttaa tcgtatcata
     6541 atagattttt ggctctctga gtggtaaggt gccttgctct gcttttactt ttggtcgagt
     6601 acttgactga gctaaattct caagagcatc tggtatcaag tcctgctctt taagtgcttg
     6661 actaatcgcc tctcgaatca aggtcatgag ttctttttcc ttggagatgc gaacttcctg
     6721 cttggtcgga tgcacattga catcagcaag ataggggtca atttctatag aaatgactgc
     6781 caatggaaag cgtccaacca tcaacttact gccgtaacct tccaaaatta ctcgattcag
     6841 caaaaaattc ttgatatagc gaccgttgat gaaaatggaa atgtagttgc ggttggcacg
     6901 agtcaactct ggcaaggaaa cataacctga aatctgaaaa tccagatctt ctgcctcaat
     6961 ttcaaccatt tttttggcag aagcaatccc ataaatccct gaaattgcct gacgaagttt
     7021 ccctgtccct gcagttctaa ttaattctcg tccttcgttt actaaggcaa aggctatttc
     7081 cggatgagct agactcaatc gatttacaac atcaacaata tgtgataatt cagcctgttg
     7141 actgcgaacg tatttgagac gagcaggggt attgtaaaat aaatccgaaa cagtaatctg
     7201 cgtaccaact ggacgactaa ctggctcctc tttctcgatg acaccacctt tggcctccaa
     7261 atgaagtccg tgtgcagagt ctgccgtagc tgtctcaatg atcatatgac tgacagaagc
     7321 aatggagggc agagcttctc cacgaaaacc gagggtgcga atacgaaaca aatccgattg
     7381 attttttatc ttactggtgg cgtgacggcg gagggcaagc gctacttcat caggggcaat
     7441 cccctcaccg ttatccgtaa tttgaatcat tttgaggcca gcctcttcaa cactaatttc
     7501 aatctgacta gcccctgcgt caatggaatt ttccaccaac tccttaacca cactggctgg
     7561 tcgctcaatg acctcaccag ccgcaatctg gttggctagt atttctggta gttcaataat
     7621 atgtgacatc atttctccta catttcttta ataatttttc ccgaatgctt atttttccat
     7681 tataccacat atccactttc cctccttttc ccagataggc taaag
//
LOCUS       DASFQD010000107         7691 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.108, whole genome shotgun sequence.
ACCESSION   DASFQD010000107 DASFQD010000000
VERSION     DASFQD010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7691)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7691)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7691
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.108"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..510)
                     /locus_tag="U1021_001808"
     CDS             complement(<1..510)
                     /locus_tag="U1021_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1273 domain-containing protein"
                     /protein_id="HEM4712319.1"
                     /translation="MDTKSLLVTGYRHTDLGIFSEKDPRLHIIKSAIRRNFIRFLEEG
                     VSWFILTGQLGFEYWSLEVLEDLRAEGYQLSIATIFPFENHGEQWNEANQAKLARFKQ
                     VDFVKYAYPRYENPGQFRDYNQFLLDNTAGCYLFYDSENETNLKYLYHMVLKKEGYNK
                     KTLTFEELNE"
     gene            576..1193
                     /gene="recU"
                     /locus_tag="U1021_001809"
     CDS             576..1193
                     /gene="recU"
                     /locus_tag="U1021_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RecU"
                     /protein_id="HEM4712320.1"
                     /translation="MVNYPHKVSKKINRTSPISSQRVNFANRGMSFEAAINDSNQYYL
                     AHDIAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQASTTDYSGVFKRHYIDFEAKET
                     RQKASMPMKNFHAHQIEHMKQVVKQGGICFVLLHFSTLKETYLLPATHLIEFYQVDMG
                     SKSMPLTFIRQYGFEIQMGRFPSIPYLEIVEKNLLGGESFENYNN"
     gene            1162..3348
                     /locus_tag="U1021_001810"
     CDS             1162..3348
                     /locus_tag="U1021_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEM4712321.1"
                     /translation="MVNLLKTTTIKKALLITANILLAGAIIACLAGAALVVYYIQSAP
                     ELTEESLTATVSSKIYDKNGNLIADLGAEKRSSAKTEEIPTDLVNAIVAIEDQRFFNH
                     RGVDVIRIAGSLINNLSGGRLQGGSTLDQQLIKLTYFSTSVEDQNLKRKIQEAWLATQ
                     LERRNTKQEILTYYINKVYMSNGNYGMKTAALAFYGKELKDLTLPQLALLAGMPQAPN
                     QYDPYTNPEDAKERRDLVLAEMLEEKYIDNTQYEQAVLTPVTDGLQPLSTAAAYPAYM
                     DNYLKQVVEEVEAKTGYNLLTTGMDVYTNVDPAAQQQLWNIYNTDMYVSYPDDLLQVA
                     STVVDVSNGKVVAQLGSRKQETNVSFGTNQAVETNRDFGSTMKPITDYAPAFENGIYT
                     STADLILDGPYNYPGTTTPVNNWDKQYYGNISVKTAIQYSRNVTAVKALEATGLENAL
                     KFLNSVGIAYPDIHYSNAISSNTSDTSSKYGASSEKMAAAYAAFANGGTYYAPQYVNK
                     IVFSDGTVTEYAPKGTKVMSAETAYMMTDMMKAVMSYGYGLNASVSGVPMAGKTGTSN
                     YTDSETDTILASIPEANYSYMVVPDENFVGYSSQYAMAVWTGYTNRMTPILDNSMRIA
                     TDVYHNMMLFMHSDYTATDWEMPSGLVRYGSNYYLRGSRSLSNAYNTYTSSSTSSSSS
                     TETSETAEATTTSSEASSGTSTETATSSTETATTGNNPATGQTDGQ"
     gene            3407..4120
                     /gene="rsmG"
                     /locus_tag="U1021_001811"
     CDS             3407..4120
                     /gene="rsmG"
                     /locus_tag="U1021_001811"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004260112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEM4712322.1"
                     /translation="MKPEVFYKTLADQGIQLSDQQKHQFHRYFQLLVEWNEKINLTAI
                     TEESEVYLKHFYDSIAPILQGHIQNEPLRLLDIGAGAGFPSLPMKIIFPQLDVTIIDS
                     LNKRINFLHLLAKELELEGVHFYHGRAEDFAQDKNFRAQFDLVTARAVARMQILSELT
                     IPYLKLNGKLIALKASSAEDELTQAKNALNLLFAKVIENHDYTLPNGDPRTLTIVEKK
                     KETPNKFPRKAGMPNKRPL"
     gene            complement(4162..4365)
                     /locus_tag="U1021_001812"
     CDS             complement(4162..4365)
                     /locus_tag="U1021_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEM4712323.1"
                     /translation="MVQGTVKWFNAEKGFGFIAQENGPDVFAHFSEIQSDGFKSLEDG
                     QKVTFEVEQGQRGLQATNITKIG"
     gene            complement(4525..5359)
                     /locus_tag="U1021_001813"
                     /pseudo
     CDS             complement(4525..5359)
                     /locus_tag="U1021_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646498.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
     gene            complement(5356..7029)
                     /locus_tag="U1021_001814"
     CDS             complement(5356..7029)
                     /locus_tag="U1021_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712324.1"
                     /translation="MKKIIEFKDFTFKYQAQQEPTLKDIQLTIYQGEKVLIIGPSGSG
                     KSTIGQCLNGIIPNIYKGEHSGSLLLDGQEAFNLSVYDKSLLVSTVLQDTDGQFIGLS
                     VAEDLAFALENDMESQVVMKQKVGDWAERLSLTDLLAHRPQDLSGGQKQRVSLGGVLI
                     DESPILLFDEPLANLDPKSGQDTIDLIDRLHKQEGTTTIIIEHRLEDVLYRQVDRVVL
                     INDGRILFNGGLDDLLRTSLLQENGIREPLYLSTLRALGYPIAQAEHLSSVWEIDIEA
                     LNIASLLTLHFENGEKESLLEVKHLHFSYPNKQVLTDIQLTIHKGERLAIVGKNGAGK
                     STLAKVLCGFIQGEGEILWKGQSIKEDSVKERAERIGYVLQNPNQMISQTMIFDEVAL
                     GLRVRGVTEEEIEHRVHHILKVCGLYPFRNWPISALSYGQKKRVTIASILVLNPEIIL
                     LDEPTAGQDQRHYREMMEFLDQLNAQGHTIVMITHDMQLMLDYSDRAVVVVDGQIIED
                     ASPAEILSDDMVIERANLKETSIFHLAERLGVNPLELTTFYMQEERRGR"
     gene            complement(7141..7458)
                     /locus_tag="U1021_001815"
     CDS             complement(7141..7458)
                     /locus_tag="U1021_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HEM4712325.1"
                     /translation="MAGRFYEAIVFAVATFGDIKSATLPEGGNLILMQADSFAQRVPF
                     QVVASGNEVLISLNVASRKEVDRLIERVEANGGQIIGCPTDARGFYGASFTDLDGIIL
                     MRL"
BASE COUNT         2435 a         1680 c         1381 g         2195 t
ORIGIN      
        1 ctcattcaat tcttcaaagg taagcgtttt tttattatat ccttctttct ttaagaccat
       61 gtgatataaa tatttcaaat tggtttcatt ttcagaatcg taaaataaat aacaacctgc
      121 cgtattatcc agtaaaaact ggttatagtc tctaaattgc cctgggtttt catagcgtgg
      181 ataagcatac tttacaaaat caacctgctt aaaccgtgct aactttgctt ggttagcctc
      241 attccactgt tcgccatgat tttcaaatgg aaatattgtt gcaatactca gttgataccc
      301 ctcggctcgt aaatcttcta agacttctaa ggaccagtat tcaaaaccca attgacctgt
      361 cagtataaac caactaacac cctcttctaa aaaacgaata aaattcctac gaattgcaga
      421 tttaataatg tgcagtcgag gatctttttc tgaaaaaatt cccaggtctg tatgtctata
      481 acctgttacc aaaaggctct tagtatccat ttcttgtact cttttcgcta attatggtat
      541 aatatgctga tattatttta tcaagaagga gttctatggt caattatcct cataaggtgt
      601 caaaaaaaat caatagaacc agtcctattt catcccagcg agtaaacttt gctaatcgcg
      661 gaatgtcttt tgaggccgct atcaacgata gcaatcaata ttaccttgcg cacgatattg
      721 ctgtcattca caagaagcca actcccgtgc aaattgtaaa agttgattac cccaaacgga
      781 gccgtgctaa gattgtcgaa gcatactttc gacaggcatc taccacagac tactctggtg
      841 tttttaaaag acattatatt gattttgaag cgaaagagac acgccaaaaa gcatccatgc
      901 ccatgaaaaa ttttcatgcg catcagatcg aacacatgaa acaggttgtt aaacaaggtg
      961 gcatttgttt tgtccttctt cacttttcaa cattaaaaga aacctatctc ttgccagcca
     1021 ctcatttgat cgaattttat caagtagaca tgggtagtaa gtcgatgcct ctaaccttta
     1081 ttcgacaata cggctttgag attcaaatgg ggcgtttccc cagcatccca tatctggaaa
     1141 tcgttgaaaa aaatctatta ggtggtgaat cttttgaaaa ctacaacaat taaaaaagct
     1201 cttctaatca ctgcaaatat tttactggcg ggggctatca ttgcctgcct ggccggagct
     1261 gcattggttg tttactacat ccaaagcgct ccagaattga cagaagaatc tttgacagca
     1321 actgtgtcaa gtaaaattta cgataagaac ggaaatctta ttgcagattt aggagcagaa
     1381 aaacgttcga gtgccaagac tgaagaaatt ccaacagact tggtaaatgc gattgtcgca
     1441 atcgaagacc aacgcttctt caatcataga ggggttgacg ttattcgtat tgcgggttcc
     1501 ctgattaata acttgagcgg aggacgtttg cagggtggct cgacacttga ccaacagctt
     1561 atcaagctga cttatttctc gacatccgta gaagatcaaa atctaaaacg gaaaattcaa
     1621 gaggcttggc tggctactca attggaacgc cgcaatacca aacaagagat tttgacctac
     1681 tacatcaaca aggtgtatat gtcaaatggt aattacggta tgaagactgc tgctcttgct
     1741 ttttatggaa aagagttaaa agatttgact cttcctcaat tagctctttt agcaggaatg
     1801 ccccaagcgc caaaccaata tgatccttat accaatccag aagatgcaaa agaacgtcgc
     1861 gatttggtat tggctgagat gctggaagaa aagtacattg ataataccca gtatgaacaa
     1921 gctgttctaa cacctgtaac agatggtttg caaccactat ctactgcagc tgcttatcct
     1981 gcttatatgg acaactatct gaaacaagtc gttgaagaag ttgaagcaaa aacaggttac
     2041 aacttgctga caacagggat ggatgtctat acgaacgtcg atcctgccgc ccagcagcaa
     2101 ctttggaata tctacaatac agatatgtat gtcagctatc cagatgattt attacaggta
     2161 gcttcaacgg ttgtggatgt ttctaatggt aaagtcgttg cgcaattagg tagtcgtaaa
     2221 caggagacaa acgtctcgtt tggtaccaac caagccgttg aaaccaaccg cgactttggt
     2281 tctacaatga agccaatcac agactatgct cctgcttttg aaaacggcat ttatacatct
     2341 acagcagatt taatcttaga cggtccttat aactatcctg gtacaacaac tcctgtcaat
     2401 aactgggata aacaatacta tggcaatatc tctgttaaga ctgctattca gtattctcga
     2461 aatgttacag ccgttaaagc attggaagct acaggcttag aaaatgcctt gaaatttttg
     2521 aatagcgttg gtatcgctta ccctgatatt cattactcta atgctatttc aagtaataca
     2581 tccgatacta gcagtaagta tggagcaagt agtgaaaaaa tggctgctgc ctacgctgct
     2641 tttgccaatg gtggtactta ctacgctcca cagtatgtca ataaaattgt ctttagtgat
     2701 ggaacagtaa cagaatatgc tcctaaaggg accaaagtca tgtctgccga aacagcctac
     2761 atgatgaccg atatgatgaa ggctgttatg tcttacggtt atggattaaa cgcttctgtt
     2821 agtggagttc ctatggcagg taaaacaggt acatcaaact ataccgatag cgaaacagat
     2881 actattctag cttcaattcc agaagcaaat tatagctaca tggtcgttcc tgatgaaaac
     2941 ttcgttggat attctagtca gtatgcaatg gctgtttgga ccggatacac caatcgtatg
     3001 actcctatcc ttgataacag catgcgaatt gcaacagatg tctaccacaa tatgatgctc
     3061 tttatgcatt cggactatac agctaccgat tgggagatgc caagcggact cgtacgttac
     3121 ggttccaatt actatctcag aggtagtcgc tcactatcca atgcttataa cacgtacact
     3181 agctctagta caagttcttc tagttcgact gaaactagtg aaacggccga agcgacgaca
     3241 acatcaagcg aagcatcatc tggaacttcc accgagactg caacttcttc aactgaaact
     3301 gcaacaacag gaaacaatcc tgcgacggga cagacagatg gtcaataaga aaattcccag
     3361 actcttctgg gtttttcttt tgcttaaatt atgataagat aagattatga agcctgaagt
     3421 attttataaa accttggcag accaaggtat tcaattaagc gaccaacaaa aacaccaatt
     3481 tcatcgctat ttccaactat tagtggaatg gaatgaaaaa atcaatctga cagctattac
     3541 cgaggaaagc gaagtctatc tgaagcattt ctacgattct atcgctccaa tcctacaagg
     3601 ccatattcag aacgaacctc ttcggctttt agatattgga gctggagctg gatttcctag
     3661 cctacctatg aagattatct ttccgcaact agatgttacc atcattgatt ctcttaataa
     3721 acgaattaac tttttacatt tgcttgccaa agaactagag ctcgaaggtg ttcatttcta
     3781 tcatggtcgt gcagaagact ttgcacaaga taagaacttc cgtgcacaat ttgaccttgt
     3841 cacagcacgc gcagttgccc gcatgcagat tctttctgaa ttgactattc cttatttgaa
     3901 gctcaacgga aaattaatcg cactcaaggc gtccagcgca gaagatgaat tgacccaggc
     3961 aaaaaacgca ctcaatctcc tcttcgcaaa agtcatcgaa aaccacgact atactcttcc
     4021 aaatggcgac cctcgaacat tgaccatcgt cgaaaagaaa aaggaaactc caaataagtt
     4081 tccacgcaaa gctggtatgc caaataaaag acccctttaa acataagaag agcgagtttc
     4141 actaagaaac ccgctctttt attatccaat ttttgtaata ttggttgctt gaagaccacg
     4201 ttggccttgc tccacttcaa atgtcacttt ctgaccatct tccaacgact taaaaccatc
     4261 tgattgaatt tcagaaaagt gcgcaaatac atctggaccg ttttcttgag caataaaacc
     4321 aaatcccttt tctgcattaa accatttaac tgtaccttgt accatttgtg ttacctcttt
     4381 ttatttattt gtaaaactta gcaagaggaa aaacaaaaga tgaaactgat acttaaactc
     4441 taaatttatt tacattccct actgtaacag tatatttcct atatgtcaac gataaagggt
     4501 tgataagccc aataaactca ataatcatcg ccacggatta tagaatcgac cctgattaac
     4561 aaaaaataga tagattgtca cgactactag agcaagaata aatagcaaga cagcgtaatc
     4621 tattctctgt agaggctgtt gggtatacca tgttcttttt ttattttttc caaaacgccg
     4681 caattccata gccgttgaaa tcgtatcaat cctctccaag gagctgaaaa tcaaaggaat
     4741 gacaagggat agattccctt ttatacgatc catcaatttt cctttcctgg acaattccaa
     4801 accacgcgct tcttgagaca ttcgaatcgt ataaaactct tcttgaatat ctggaatata
     4861 acgcatggtc aaacttactg cgtaagcaac tttgtaggat accccaattt gattcaagct
     4921 ggaagcaaac tggctaggat gagtggtcat gagaaagata atcgctaaag gaactgtaca
     4981 aaaatacttc aagagaagat tcaccagata aaatgcttgc tgactcgtca aggaataaac
     5041 tcccagacct gatagcaagg gagtgcctgc tccgtaaagt tccactccat accgtggtgc
     5101 aaacaagtga accatcaggg cattcattgc agcaaaaaat gatcgtcaga attaaaacaa
     5161 gagagatttc tttataacga atccctgaca ttttgaacaa ggctagagaa aatactgcga
     5221 taaaaagaat caagcgggta tcataagtaa tcatagcaag aatggaaact atgagaaaaa
     5281 agagtaattt actgacagcc gataaactat gaataaagcc agttcctgga tggtaaccaa
     5341 ttagtttttg ttgactcatc ttcctctcct ttcttcctgc atataaaacg tcgttaattc
     5401 caagggatta actcccaacc tctccgccaa gtgaaaaatt gatgtttctt ttaaattggc
     5461 tcgctcaatc accatatcat cagataaaat ttctgctgga ctggcatctt caataatctg
     5521 cccatccacc acaacaacag ctctatctga ataatctagc atgagttgca tgtcatgggt
     5581 aatcatgaca atggtgtgcc cttgagcatt taattggtcc aaaaactcca tcatttcccg
     5641 ataatgccgt tgatcttgtc ctgctgttgg ctcatctagc aaaataattt ctggattgag
     5701 aaccaagata gatgctatcg ttacccgttt tttctgccca taggaaagtg ccgaaatcgg
     5761 ccaattacga aacggataca ggccacatac tttcaagata tggtgaactc ggtgttcgat
     5821 ttcttcttct gtcacccctc gtacgcgcaa accaagagca acctcatcaa agatcatcgt
     5881 ttggctaatc atttggttgg gattctgaag aacataacca atccgttctg ctcgctcttt
     5941 gacagaatct tctttgattg actgcccctt ccagagaatc tcaccctcac cctgaataaa
     6001 accacaaagc accttggcta aagtagattt cccagcacca ttttttccaa caatagctag
     6061 acgctctccc ttatgaatcg tcagttgaat atctgtaaga acttgtttgt taggatagga
     6121 aaaatgaaga tgcttgactt ctaacaaaga ctctttctct ccattttcaa agtgtagagt
     6181 cagtagagat gctatattca aagcctcaat atcaatttcc caaactgagg agaggtgttc
     6241 tgcctgcgca atcggatatc ctaaggcgcg aagagtcgat agatataagg gttcacggat
     6301 gccgttttcc tgtaacaatg aggtacgtaa taaatcatcc agtcctccat tgaacaaaat
     6361 ccgaccatca ttaatcaata caactcggtc cacctgacga tacagtacgt cctctaaacg
     6421 gtgttcgata ataatggttg tggtcccttc ttgcttgtgc agacggtcaa tcaaatcaat
     6481 cgtatcttgg cctgatttgg ggtctaaatt agcaagtggc tcatcaaaca acaaaatagg
     6541 actctcatca ataagaactc cgcccagact gacacgttgc ttttgacctc cagataaatc
     6601 ttgtggtcga tgtgccagca aatcggtcaa agacagtctt tctgcccaat ctcctacttt
     6661 ttgcttcatc accacctggc tttccatgtc gttttccaag gcaaaagcta ggtcctcggc
     6721 aactgataaa ccaatgaatt gaccatctgt atcttgaaga accgttgata cgagcaagga
     6781 cttatcataa actgaaagat taaacgcttc ctgaccatcc aatagtaaac ttccgctatg
     6841 ttcccccttg taaatattgg gaataatacc attaagacat tgtccaatcg tcgactttcc
     6901 tgaaccagat gggccaataa tcagaacttt ctctccctga taaatcgtta actgaatatc
     6961 ttttaaagtg ggttcctgtt gcgcttggta tttaaatgta aaatctttaa actcaatgat
     7021 ttttttcata ggactattat agcgtaaatt gactctgaaa aaaaggaaga atcatcagtt
     7081 tctccctttt caaataagtt catctatgat tctagagcag atgaattcta ccttcttgcc
     7141 tcacaatcgc attaaaatga taccatcaag gtccgtaaaa cttgctccat aaaagccacg
     7201 ggcatctgtc gggcatccta taatttgccc gccatttgct tcaacacgct ctataagtct
     7261 atccacttct ttcctactcg ccacattaag cgaaatcaag acttcattgc cactcgctac
     7321 tacctgaaat ggtacgcgtt gagcaaagct atctgcctgc atcaaaatca agttgccacc
     7381 ctcgggcaaa gtcgcagact taatatctcc aaacgtcgca actgcaaaaa cgattgcttc
     7441 ataaaaccga ccagctattc aaggtctgct actgctaata ctcaatgaaa atcaaaagtg
     7501 accgaggaaa cgaagccgaa gatagaactg aagttcatca aagcaagttg acaacggata
     7561 atgttgattt tcgaagagga taagttcatc caaaatgact tcatctcctt ctcttttcta
     7621 attgataggc ttcgtataga atggactgaa gaaaatagca agaattctga ttgcacaaaa
     7681 aaattgcact g
//
LOCUS       DASFQD010000108         7503 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.109, whole genome shotgun sequence.
ACCESSION   DASFQD010000108 DASFQD010000000
VERSION     DASFQD010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7503
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.109"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            134..3352
                     /locus_tag="U1021_001816"
     CDS             134..3352
                     /locus_tag="U1021_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002917476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SP_1767 family glycosyltransferase"
                     /protein_id="HEM4712326.1"
                     /translation="MKKIICLIGDKGYLLQLTTCLKSIFRFNRQCNIYIFNQDIPQEW
                     FLSIRDIATQFDSQIHDIRLFDSELAQNWPTHDHISHMSYARYFIPKYIPEDRVLYLD
                     SDTLVCQSLDSLCSLDLQGYPLAAVPDPSGIEFNAGVLVIDNKKWRKEQILEQLIQTT
                     QAEQAIKEANPDYLFNGDQTVLNKVFAHNWLELDKVENLQVGHDMVAFYSNWTNHFSQ
                     STAFPRIIHFTTRHKPWSTFSSHRYRDLWWTFAMTDWSDLASIQLEDFQQLQTGFNAF
                     TFTNSESLEQIETLVQACPDITFHIAAYTNMGLPLLKLNVYHNVRLYQSIVGPTLDKL
                     IEHCQIYLDINHGDKPLHIIQSIKDRNIPILAFESTTSPDSQARVFSSEQVENMVAFL
                     QEVEASQKESSVKKTIVLAANYAYNTQVLTTIKSICYHNRNVTFYLINSDFPSEWFTG
                     LNKKLAPLDSRIINGRVNSQLLEGYQTNISYTVFLRYFIPQLVAEERVLYLDCDLVVS
                     QDLTPLFTMDMQGYPLAAVKDLGGQVYFNEHVFNSGVLLIDNKQWKEENMTRHLIEMT
                     NEWHDKVIQDDQSILNMVFKDRWLALENNYNFVTIHQMFSDYPLDHPTYPAVIHYLTE
                     RKPWSIYTQSLFRDLWWFYHDLEWTDIQKQEPLPRMEKLQVEKPKPTAFIYTYSEGLE
                     GIEFLLENLPQWTFIIASPVMVSDRLASLLRYDNLVLASNLIGLTCVVEDLVGQSTVL
                     LDINYDGEVEHIIERFHTLNKPVYSLPQTQHGQQGQIAFSQVQELALALERLANKVDG
                     SGNTDSPTVIGISETIDYLLKHQSSLARFGDGEMDIIAGNSIPYQDYDANLAKELKEI
                     MSQSSSETFVVCLSDVFEKQERYTESAQNFWKHHLEHYKDYYQEICQADWYGSTFISR
                     PYMDLVDKEPSAGYFAQLKQIWQDKDILIVEGKHSRSGIGNDLFDNAKSIQRIICPAK
                     NAYQNFQQIKEATLQYGKDRLILAMLGPTAKVLAYQVAKENLQIIDIGHIDSEYEWFK
                     VKATHKIKFNHKHTAEHNFDQDIVLQEDSTYASQIILDLSES"
     gene            3358..5439
                     /locus_tag="U1021_001817"
     CDS             3358..5439
                     /locus_tag="U1021_001817"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012745.1,HMM:NF013652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM4712327.1"
                     /translation="MHNSNPIHIAFSVAGKYADYLGTTIYSILKHNSDNTIHFYILYQ
                     EIETEYRQNLEKLLLHFPNATIRFLKIENNYLNQIKPAKDGLHVSTYYRFLLTELLPE
                     LDKVLYLDVDVLVRGNIKPLWDTDISSVSLGVSREIDIYAGAPDHVTSIGLEDHHNYF
                     NAGVILFNLNKLRVEQLDKVLLETAVAKSPDLRFGDQDILNMIFKDDTTLFSYIYNFT
                     NWRLMWPEISDQPGIILHFSGSGKTKPWNNKHQTFDYLGPYIDEYRKYRLEYYHLIAS
                     NKSKVAVVVELHDREEHLKECIDSIIRQSYTNLDILLLDDQANEHCRKIAQEYCTIDQ
                     RISFTAPHSVTRAERYQTIAEKTAANYILFVRESDILEEDCIKYLVEKAEYGNTDLVL
                     SNYFVFDSNDGVFYFHEPIKNGDALQKQDLESLSNKQQNYLEHLWGKLFTTEYFLENI
                     PSYRGNLLLSDFYAAPSLTYLPRADYIYREDKTEKISVIVTAYNVAPYIEECVTSILN
                     QTYQNIEIILVNDGSTDETAKICDKLASQDNRIKVIHKENGGASDAKNVGVKHANGEY
                     ITLVDGDDVIDKELVATLYHHVKQEQADIAMGHYYIYDENDGKFYYFHIDDQTNFEVI
                     TPTQAVIRQTNWGKYNNANYIITVCKLIKKTCFQGVKFPFGRKFDDDATTHKLFIKAN
                     KIVQINIYIYI"
     gene            5459..5695
                     /locus_tag="U1021_001818"
     CDS             5459..5695
                     /locus_tag="U1021_001818"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase family 2"
                     /protein_id="HEM4712328.1"
                     /translation="MTSGFQLSWVDDFIPIYEEKIADCLLAQIPLKDIRLRYINILRD
                     YKQYLEYQQLTDTKQYELILQKLQFAKLEQTDSE"
     gene            5974..6972
                     /locus_tag="U1021_001819"
     CDS             5974..6972
                     /locus_tag="U1021_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEM4712329.1"
                     /translation="MKVHITNLYGQSPLSVALMAQHMVTDIAKKLDIKEIGIYSFNAD
                     GESVENLAIRFDGMNAAVGNGDVIIFQAPSWNGTHFDHEYLKRLRIYSGIKIVIFIHD
                     IPPLMFSTNFYLMEKTIEMYNMADLIIAPSQKMLDLLYQHGLRVTNTLLQNMWDHKTD
                     IWLEKPAFHRVVNFTGNPQRFHFVDDWQFATPLNLFAPEYYPTKPNNVSYKGWKYSLT
                     LLEELNKNGGFGLVWSQGEDAEYYNLNVSYKLSTYIAAGLPVIAPRSLSNAHYISEYK
                     LGFLVDSLEEANAIVSTITEEEYRSLLDSLWNFRELITKGYFAQKLLTDAVHQVMI"
     gene            6986..>7503
                     /locus_tag="U1021_001820"
     CDS             6986..>7503
                     /locus_tag="U1021_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM4712330.1"
                     /translation="MDDLISVIVPVYNVEKYLSQCLESIINQTYKNIEILLINDASTD
                     NSKQICQHYAQLDSRIKLFNKPENRGVSDSRNWGIENCVGEYIIFIDSDDYIEYNFIE
                     KLYEVSISEYADIVVGEYYRYIENQGNFLIHVHNIIKEELSKHDCIDKIFLAHTDIFN
                     FPVAKLIKKNLF"
BASE COUNT         2437 a         1646 c         1281 g         2139 t
ORIGIN      
        1 cgtgtcaaga ctccgtcctt tcttcctttt ctcgtaattg tgtgatataa ttttcaatat
       61 atgatatgac atctgcttat acctgattaa ctagcacaac gggtaactac tacatttttc
      121 aaaaggatat ttcatgaaaa aaatcatttg cttaatcgga gataaaggct acctgctgca
      181 attgactact tgcctcaaat ctatttttcg ctttaaccgc caatgtaaca tttatatctt
      241 taaccaagat atccctcagg agtggtttct ctctatcaga gacattgcta cacaatttga
      301 cagtcaaatc catgacattc gtctctttga tagcgagtta gctcaaaatt ggccgaccca
      361 cgaccatatc agccatatga gctatgctcg ttactttata ccaaagtaca ttccagaaga
      421 tcgcgttctt tacctagaca gcgatacctt ggtctgtcaa tcccttgact ctctctgctc
      481 cctagacctt caaggctacc cacttgctgc tgttccagat ccttcaggaa ttgagtttaa
      541 cgctggtgtc ctcgtcattg ataataagaa atggcgtaag gaacaaattc tcgagcaact
      601 cattcaaaca acccaagctg aacaagccat aaaagaagca aatccagatt accttttcaa
      661 cggagaccaa actgtcctca acaaagtatt tgcccataac tggctcgaat tagacaaggt
      721 agaaaatcta caagttggtc acgatatggt cgccttttac agcaactgga ccaaccattt
      781 ctcacagtca acagcatttc cacgtatcat ccacttcact actcgacaca agccttggag
      841 taccttcagt tcacaccgtt accgagatct ctggtggaca ttcgctatga cggactggtc
      901 tgatttagcc agtattcagc tagaagattt ccagcagctc cagacaggtt ttaatgcctt
      961 tacctttacc aattcagaat cactcgaaca gattgaaacc cttgttcagg cttgtccaga
     1021 tatcaccttc cacatcgcag cctatacaaa catgggttta ccactgctca agctcaatgt
     1081 ctaccataat gtgcgactct atcagtccat tgtcggtcca accttggata agctcatcga
     1141 acattgccag atttatctag atatcaatca tggcgacaag ccacttcata tcatccaatc
     1201 catcaaagac agaaatatcc ctattcttgc ctttgaatca accactagcc ctgatagtca
     1261 ggcaagagtc ttttcatcag aacaagttga aaatatggta gcattcttac aagaggtaga
     1321 agccagccaa aaagaaagct ccgtcaagaa aaccatcgtg ctagcagcta attatgcata
     1381 caatacacaa gttttaacca ctattaaatc catctgctac cataatagaa acgtaacctt
     1441 ctacctcatc aatagcgatt tcccatcaga atggtttaca ggcttgaata aaaaattggc
     1501 tccactggat tcacgcatta tcaatggcag ggtcaatagc cagttgctag aaggttatca
     1561 aacaaatatt agttatactg tctttctacg atactttatc ccccaattgg tagctgaaga
     1621 acgagtcctc tatcttgatt gtgacctagt ggtttctcaa gacttaacac cgctatttac
     1681 aatggatatg caaggctatc ctctggctgc tgtcaaagat ttaggaggcc aagtctattt
     1741 caatgagcat gtctttaact cgggtgttct tctcatagac aataaacaat ggaaagagga
     1801 gaacatgacc agacatttga ttgaaatgac aaatgaatgg catgacaagg tcatacaaga
     1861 cgatcaaagt attctaaaca tggtcttcaa agatcgctgg ttagcacttg aaaacaacta
     1921 taatttcgta accatacacc aaatgttttc agactatcca cttgatcatc caacctatcc
     1981 agccgttatc cactatttga ccgaaagaaa accttggagt atctatacgc aatccttgtt
     2041 tagagatttg tggtggtttt atcatgactt ggagtggacc gacatccaaa aacaggagcc
     2101 tctcccacgt atggaaaaac ttcaggtaga gaaacctaaa cccactgcct ttatctacac
     2161 ctacagcgaa gggctagaag gaattgaatt tctcttggag aatcttcctc aatggacctt
     2221 tatcatcgca tcacctgtca tggtttccga ccgactagct agtctattac gttatgataa
     2281 tctcgtcctt gcatccaatc tcatcggcct gacctgtgtc gttgaagatt tggttggtca
     2341 atcaactgtc ttactagaca tcaattacga cggcgaagtt gaacatatta tcgaacgatt
     2401 ccataccctc aataaaccag tctactccct accacaaacc cagcatgggc aacaaggtca
     2461 gattgctttc agccaagtgc aggaacttgc tctagcctta gaaagactgg ccaataaagt
     2521 agacggatca gggaacaccg attccccaac agtcatcgga atttccgaaa ccattgacta
     2581 cctcttaaaa caccaatcct cccttgctcg atttggtgat ggagaaatgg acatcattgc
     2641 cggtaatagc atcccttatc aagactacga tgcaaacttg gccaaagagc ttaaagaaat
     2701 catgtctcaa tccagctcag aaactttcgt cgtttgtcta tcagatgtct ttgaaaaaca
     2761 agaacgttat actgaatctg ctcaaaactt ctggaaacat cacttagaac actacaagga
     2821 ctactaccaa gaaatctgtc aagcagactg gtacggctct accttcatct ctcgccctta
     2881 tatggacttg gttgacaagg agccctcagc tggatatttt gcacagctaa aacaaatttg
     2941 gcaagataaa gatattttaa ttgtcgaagg caaacactct cgttctggta ttggaaatga
     3001 tttattcgat aatgctaaat ccattcaacg cattatctgc ccagcaaaaa atgcctacca
     3061 aaacttccag cagattaaag aagcgactct ccaatatgga aaagaccgat tgattctagc
     3121 aatgctaggt ccaactgcaa aagtgctggc ctatcaagtt gctaaagaaa atttgcaaat
     3181 cattgacatc ggccatattg attccgaata cgaatggttc aaggttaaag caacacataa
     3241 gataaaattt aaccataaac atactgcaga acataatttt gaccaagata ttgttctcca
     3301 agaagacagc acctatgctt cacaaattat tctagattta tcagaaagtt aagaaatatg
     3361 cacaattcca atcctatcca catcgccttt tctgtggcag gaaagtatgc ggattattta
     3421 ggtactacca tttactctat cttaaagcat aatagcgata acactattca tttctacatc
     3481 ttatatcaag aaatcgagac agagtacaga cagaatcttg aaaaactgct tttgcacttc
     3541 ccaaatgcaa cgattcgttt cttaaaaatc gaaaataatt acctcaatca aattaaacct
     3601 gcaaaagatg gtctacacgt ctcgacttac tatcgttttt tactaacaga actcctacca
     3661 gaactagaca aagtacttta cttagacgtc gatgtactgg tacgtggaaa catcaaacca
     3721 ctttgggaca cagatatatc ttccgtttct ttaggtgtct ctcgagaaat tgatatctac
     3781 gcaggtgcac ccgatcatgt gacctctatc ggtcttgaag accatcacaa ctatttcaat
     3841 gctggcgtta tcttatttaa cctcaacaaa ctacgggttg agcagctgga taaggtactt
     3901 ctagagacag ccgtcgcaaa aagtcctgat ctgcgttttg gtgaccagga tattctcaat
     3961 atgattttta aagatgatac caccctattc agctatatct acaattttac caactggcgt
     4021 ctcatgtggc cagaaatcag cgaccaacct ggtatcatcc ttcacttttc tggctcaggt
     4081 aaaacaaaac catggaataa taagcaccaa acctttgact atcttggtcc ctatattgat
     4141 gaataccgca agtatcgctt ggaatactac catctgattg cttctaataa gtctaaagta
     4201 gctgtggtcg tagagcttca tgaccgtgag gaacacctaa aagaatgtat cgacagtatt
     4261 attcggcaat cctataccaa ccttgacatt ctattactcg atgatcaagc aaacgaacat
     4321 tgtcgtaaga ttgcacaaga atattgcacg atagatcagc gtatctcttt cacagctcca
     4381 cacagcgtta caagagcaga aagatatcaa acaattgctg aaaaaacagc agcaaactat
     4441 attctattcg tccgtgagag tgacatttta gaagaagact gcatcaaata tctagtagaa
     4501 aaagctgaat acggaaatac tgaccttgtt ttatcaaact actttgtttt tgacagcaat
     4561 gatggcgtat tttactttca cgaacctata aaaaacgggg atgcactaca gaagcaggac
     4621 ttagaaagtc ttagtaacaa gcaacaaaac tatctggaac atctttgggg aaaactcttc
     4681 actactgagt acttcttaga aaatattcca tcttatcgtg gaaacctatt actatcagac
     4741 ttctatgctg ctccttcact tacctacctt ccacgtgcag actacatcta ccgagaagat
     4801 aaaaccgaaa aaatcagcgt tattgtaaca gcctataatg ttgcgccata catagaagaa
     4861 tgtgtcacga gtatcttaaa tcaaacctat caaaatatag aaatcatcct tgttaacgac
     4921 ggatcgacag atgaaactgc caaaatctgc gataaactag caagccaaga caatcgtatc
     4981 aaggttatcc ataaagaaaa tggcggagct tccgatgcta aaaatgtcgg tgtcaaacat
     5041 gctaatggcg aatacattac tctagttgac ggtgacgatg ttattgacaa ggaactcgtg
     5101 gcaactctgt atcaccatgt taagcaagaa caagctgata tagccatggg gcattattat
     5161 atatatgatg aaaatgatgg gaaattttat tattttcata ttgatgatca aacaaacttt
     5221 gaagtcatca ctcccactca agctgtcatc cgtcagacca actggggaaa atataataat
     5281 gccaactata ttataaccgt ctgtaagctg ataaagaaaa cttgtttcca aggtgtcaaa
     5341 tttccttttg gtcgcaaatt tgacgatgat gcaacaaccc ataagctctt cattaaagca
     5401 aataaaattg ttcaaatcaa catatatata tatatatagg agacgaaaaa atagtatcat
     5461 gacatctggt tttcaactat cttgggttga tgattttatt ccaatctatg aagaaaaaat
     5521 tgcggattgc ctccttgctc aaatcccatt aaaagatatt cgattacgct acatcaatat
     5581 tttaagagat tacaagcagt acttggaata ccaacagctc acagatacca aacagtatga
     5641 acttattttg caaaagttac aatttgcaaa gttagaacaa acagactcag aataaaaacc
     5701 tgtattcaca gttcagtgct tccatctaag gctagttttt cagctagtca tcgctagttt
     5761 tttcaagata caatcagtat ttcctcaaaa tcactgcctt gatgagcaaa aaactatctt
     5821 ttaaataaaa gtactttact tttgaataca ggttctaaga ctgaacaaaa tccagcttgg
     5881 ttatagtcct gaactgctac aaaacatcgc aactgtttta catgctgaat ttaatccttt
     5941 tggtatctaa ctctaaagaa agtaggaaat agtatgaaag ttcacattac caacctctac
     6001 ggccaatcgc ctctgagtgt cgcactcatg gctcaacata tggttacaga tattgccaaa
     6061 aagttagaca tcaaggaaat cggtatttat agtttcaatg ccgatggcga aagcgttgaa
     6121 aatctggcta ttcgatttga tggcatgaat gctgctgtag gaaatggcga tgttatcatt
     6181 ttccaagcac ctagctggaa tggtacccac tttgaccatg aatacctcaa acgtctgaga
     6241 atttattctg gcataaagat tgtcatcttt attcatgaca tcccacctct catgtttagt
     6301 accaacttct atctgatgga aaagaccatc gaaatgtata acatggctga tttgattatc
     6361 gcaccgtctc aaaagatgct ggacctgctc taccagcatg gccttcgtgt caccaatact
     6421 cttttgcaaa atatgtggga tcataaaaca gatatctggc ttgaaaaacc tgcctttcac
     6481 cgtgttgtca acttcacggg aaatccgcaa cgtttccatt ttgttgacga ctggcagttt
     6541 gccacaccgc tcaatctctt tgcgccagaa tattacccaa ccaaacccaa caacgtttcc
     6601 tataaagggt ggaaatacag tctcactttg ctagaagaac tgaataaaaa cgggggcttt
     6661 ggtctggtct ggtcacaagg agaagatgca gaatactaca atctcaacgt ttcctacaaa
     6721 ttaagcacct acatcgcagc aggtctacct gtcattgccc cacgtagcct ctccaatgcc
     6781 cactatattt ccgaatacaa gctggggttc cttgtcgata gtctggaaga agccaatgcc
     6841 atcgtttcca ctatcactga ggaagaatac cgttccctcc ttgattctct ttggaatttc
     6901 cgagaactga ttacaaaggg ctactttgct caaaagctac tgactgatgc ggttcatcag
     6961 gttatgattt aggaggagac acagtatgga cgatttaatt tcagttatcg ttcccgtcta
     7021 caatgtggaa aaatatttat cacaatgttt ggaaagcatc atcaatcaaa cttataaaaa
     7081 tatagaaata ctcttaataa atgatgcttc taccgataac agtaaacaaa tctgtcagca
     7141 ctatgcccag ttagacagtc gaattaaact attcaataaa cctgaaaaca gaggagtgtc
     7201 tgattctcga aactggggaa ttgaaaactg tgtgggtgag tatattatct ttattgatag
     7261 cgacgattac atcgaataca actttataga aaaattatac gaagtatcta tatctgaata
     7321 tgccgatatt gtggttgggg aatattatcg ctatatcgaa aatcaaggaa actttctcat
     7381 ccatgtacac aatatcatta aagaagaatt atccaaacat gattgtatag ataaaatatt
     7441 tcttgctcat acagatattt ttaattttcc tgttgctaag ctcattaaga aaaatctatt
     7501 ttt
//
LOCUS       DASFQD010000109         7452 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.110, whole genome shotgun sequence.
ACCESSION   DASFQD010000109 DASFQD010000000
VERSION     DASFQD010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7452
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.110"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            76..348
                     /locus_tag="U1021_001821"
     CDS             76..348
                     /locus_tag="U1021_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbG family protein"
                     /protein_id="HEM4712331.1"
                     /translation="MFEKKNRTCLTVYLHYNRDARKLSQYGDIVYHSKRLRYVFVYMD
                     QELVEATILKLKKERFVKKVVPSYIKELDQNFVGNLWRDEEPSVVG"
     gene            479..1648
                     /locus_tag="U1021_001822"
     CDS             479..1648
                     /locus_tag="U1021_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4712332.1"
                     /translation="MKTRKFAVALATFASAALLAACGNVSTTNTSAAGSSVGDTFKIG
                     YNLELSGAVSSYGQTEEKGANLAVKEINAAGGIDGKKIEVITKDNKSETAEAATVATS
                     LASEGANVVIGPATSGASAASIPALTSAGVPMITPSGTQTNLVVNDKGEVQEYFFRTT
                     FTDGYQGQIMAKYATENLSAKKVVLYFDNSSDYGKGVAEAFKKAYTGEIVSEITFASG
                     DKDFQAALTKLKDKEFDAIIMPGYYNETGTIVKQARGLGIDKPILGSDGFDSPQFTEL
                     ATASAASNVYYLSGFVTSASEKAKAFYDAYVKEYNEEPSMFSALAYDSVYMAAEAAKG
                     AADSAAVKANLAALKDFKGVTGTMSVDKEHNVIKSVYVVSLTNGEESSVDTISID"
     gene            1854..2741
                     /locus_tag="U1021_001823"
     CDS             1854..2741
                     /locus_tag="U1021_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002897070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEM4712333.1"
                     /translation="MLQQLVNGLILGSVYALLALGYTMVYGIIKLINFAHGDLYMMGA
                     FMGYFLLNNLNFIADGGTRFFVALILAMVGTAILGVVIEFLAYRPLRNSTRIAALITA
                     IGVSFFLEYTMIKFFTADVKAFPQAIEAVTFNLGPVSVTNIQLIILGVSLALMVALQL
                     IVKRTKMGKAMRAVSVDSDAAQLMGINVNRTISFTFALGSALAGAAGVLLGLYYNQIE
                     PLMGMTPGLKAFVAAVLGGIGIIPGAALGGFVIGIIETFTYVIEFDTFRDAIVYTVLI
                     IILLVRPSGILGKNVKEKV"
     gene            2744..3691
                     /locus_tag="U1021_001824"
     CDS             2744..3691
                     /locus_tag="U1021_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002914606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEM4712334.1"
                     /translation="MKQNLKVNAIWLAILLAGFGLIQGLVSAGILNFYYIQIVQQIGI
                     QIILAVGLNLIVGFSGQFSLGHAGFMAIGAYAVGILGKMMPTYGGFAIALIVGMLISG
                     AVALLVGIPTLRLKGDYLAIATLGVAEIIRILIINGGSVTNGAAGIMSIPLFTSWPLV
                     YIFVIITTLVTVNFLCSPMGRATISVREDEIAAESVGVNPTFVKVSAFVFGAMTAAIA
                     GGLHAGYVGTIVPKDFAFMTSVNVLIIIVLGGLGSITGTFVAAIVLGILNVFLKSYSD
                     ISMIIYSLALILLMIFRPGGLLGTKEFSVAALLKKKEVK"
     gene            3691..4455
                     /locus_tag="U1021_001825"
     CDS             3691..4455
                     /locus_tag="U1021_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002913097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712335.1"
                     /translation="MALLEVKDLTKNFGGLTAVGDVTMELHEGELVGLIGPNGAGKTT
                     LFNLLTGVYEPSEGTISLAGTILNGKAPSKIASLGLGRTFQNIRLFKNMTVLENVLIG
                     LGNHGKSEVFASFFRLPAFYKNEEALKTKAIELLKIFYLDGDADTLAKNLPYGQQRRL
                     EIVRALATEPKILFLDEPAAGMNPQETAELTQLIRKIKEEFGITIILIEHDMSLVMEV
                     TERIYVLEYGRLIAHGTPEEIRNNKRVIEAYLGGEA"
     gene            4455..5165
                     /locus_tag="U1021_001826"
     CDS             4455..5165
                     /locus_tag="U1021_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000062217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712336.1"
                     /translation="MAMLEVKNLSVNYGVIEAVKDVSFEVNEGEVVTLIGANGAGKTS
                     ILRTISGLVRPSAGTISFLGNEIQKVPARKIVADGLSQVPEGRHVFAGLTVMENLEMG
                     AFLRNNREENQANLKKIFARFPRLEERKNQDAATLSGGEQQMLAMGRALMSQPKLLLL
                     DEPSMGLAPIFIQEIFDIIQDIQKQGTTVLLIEQNANKALAIADRGYVLETGKVVLSG
                     TGKELLASEEVKKAYLGG"
     gene            5340..6075
                     /locus_tag="U1021_001827"
                     /pseudo
     CDS             5340..6075
                     /locus_tag="U1021_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775267.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
     gene            6183..6773
                     /locus_tag="U1021_001828"
     CDS             6183..6773
                     /locus_tag="U1021_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712337.1"
                     /translation="MKLRKVSFILVTFVIGLLSLSSVKAETSMFVPVGQQNVPGVEVA
                     PFRTGSDSIHVHVGSFGYVATYINGERLKVEPVKHELKCPSYTTENCQTKEWYTSGER
                     ADGSGDYVVKLNKKLEEGDVVTLKFADDGNLYFGQLVYKSEKKRVEQTQKEQEDEYAD
                     ALFKRSIEEEENKTWRDRIKDTFQDAWWNFKGWWNS"
     gene            6923..>7452
                     /locus_tag="U1021_001829"
     CDS             6923..>7452
                     /locus_tag="U1021_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEM4712338.1"
                     /translation="MTVIEQIEQLKKEKLELLTVLCGEDIGQYQIAKDLLLRKLDFDA
                     ADLGFAYFDMSEADYHQVDLDLVALPFFSDEKVVILDYFADLTTDKKRHLTDDELKQF
                     EAYLENPVETTRLVILAPGKLDSKRRLVKLLKRDGLVLEANPLKEMDLKNHFQKEIMR
                     LGLQMGGEVFQYLLEKS"
BASE COUNT         2173 a         1279 c         1684 g         2316 t
ORIGIN      
        1 ttacaggtag ttggagcttt tcatttatca ttgaaaacgg tataatatag aaagagaatt
       61 tttagaggag aagacatgtt tgagaagaaa aatcgcactt gcttaactgt ctatttacac
      121 tacaatcgtg atgcacgtaa actcagccaa tatggagata ttgtttacca ttccaaacgc
      181 ttgcgatatg tttttgtgta tatggatcaa gaactagtag aagctaccat attaaaattg
      241 aaaaaggaac gttttgtaaa aaaagtggtt ccttcataca ttaaggaatt agaccaaaac
      301 tttgtaggta atctatggag agatgaagaa ccatcagtcg taggatagtc ggaattagca
      361 ggtatgtatt ccctgctaat tttttatttt aaaatttttt tcttttttgt tgacaatttt
      421 cagataattc agtatattag atacatcgta aaatttaaga aagatttaag gagttttcat
      481 gaaaacaaga aaatttgcag tagcgcttgc tacatttgcc tctgcagctc tactcgctgc
      541 atgtggtaat gtttcgacaa ccaatacttc agccgcaggt tcttctgtag gtgatacgtt
      601 taaaattggc tacaacttgg agttgtcagg tgctgtttca tcttatggtc aaacagagga
      661 aaaaggtgcc aaccttgccg tgaaagaaat caatgctgcg ggtggtattg acggcaaaaa
      721 aatcgaagtg atcacaaaag acaacaagtc tgaaacagca gaggcagcta ctgttgcaac
      781 aagcttggca agtgaagggg caaacgttgt gattggtcct gctacatcag gagcttcagc
      841 agcctctatt ccagcattga catctgctgg tgttcctatg attactcctt caggaactca
      901 aacaaacttg gttgtgaacg ataaaggtga ggtccaagaa tacttcttcc gtacaacctt
      961 tacagatggg tatcaaggtc aaattatggc taaatacgct actgagaacc tgtcagctaa
     1021 gaaagttgtt ctttactttg acaactcttc tgattatggt aagggtgtag cagaggcgtt
     1081 caagaaagca tacacaggag aaatcgtttc agaaatcaca tttgcttctg gcgataaaga
     1141 tttccaagct gctttgacaa aattgaaaga taaggaattt gatgcaatca tcatgcctgg
     1201 ttactacaat gaaacaggta caattgtgaa gcaagcacgc ggtttgggta ttgacaagcc
     1261 aattcttggt tcagatggtt ttgactcacc acaatttact gaattggcaa ctgcatcagc
     1321 agcatcaaat gtttactacc tttctggatt tgtaacatca gcaagcgaaa aagcaaaagc
     1381 attctatgat gcctatgtga aagaatacaa tgaagagcca tcaatgttct cagctttagc
     1441 ttacgactcg gtttacatgg cagcagaagc agcaaaaggt gcagctgatt cagcagcagt
     1501 gaaggctaat cttgcagctc tgaaagactt taaaggtgtg actggtacaa tgtctgttga
     1561 caaagagcac aatgtcatta aatcagttta tgttgttagt ttaacaaacg gagaagaatc
     1621 atctgtagat actatctcta ttgactaata gtggatgaaa agagggaatt ccctcttttt
     1681 cacttgtcag aatgtataga atagtataca tgcggatata aaatttgggt tggttaaatt
     1741 ttctgtaatt ttaatgatta aactctctgt ctaacttgct tattttcaga aaattttgta
     1801 taatgtaaca atgctattga gctcgaaaaa tatttagaaa gattggtgaa cctatgcttc
     1861 aacaacttgt caatggtttg attcttggtt ctgtttatgc ccttttggcc cttggttata
     1921 ccatggtgta cggaattatc aaactcatta acttcgccca tggtgatttg tatatgatgg
     1981 gtgcttttat ggggtacttc ctattaaata atttaaattt tattgcagat ggtggaacgc
     2041 gtttctttgt tgctctcatt ctagcgatgg tagggacggc tattctcggt gtagttatag
     2101 agtttttagc ctatcgtcct ttgcgtaatt caacgcgtat agcagctttg attacggcta
     2161 tcggtgtatc cttcttctta gaatacacta tgattaaatt ctttacagca gacgtaaaag
     2221 cctttccaca agcaatcgaa gctgtgactt ttaaccttgg tccagtttct gttacgaata
     2281 tccagttgat tattcttggt gtatcgcttg cgttgatggt tgcacttcaa ttaattgtca
     2341 aacgtacaaa aatggggaaa gccatgcgtg cggtctctgt agatagcgat gcagctcagc
     2401 ttatggggat caatgtaaac cgtacaatca gctttacttt tgctcttggg tcggctcttg
     2461 cgggtgctgc gggtgttctc ctaggtctct actacaacca gattgagcct ttgatgggga
     2521 tgaccccagg tttgaaagcc tttgtagcgg cagtattggg cggtatcggt attattccag
     2581 gtgctgcgct tggtggcttc gttatcggta tcatcgaaac attcacctat gtgattgaat
     2641 tcgatacttt ccgcgatgcg atcgtatata ctgttttgat catcatcctc ttggtgcgtc
     2701 caagtggtat tcttggtaaa aatgtgaaag agaaggtgta accatgaagc aaaatttaaa
     2761 agttaatgcg atttggttgg ctatcttatt ggctggtttt ggacttattc aaggtcttgt
     2821 atcagcaggg attctgaatt tttactacat ccagattgtt cagcaaatcg gtattcaaat
     2881 tatcttggca gttggtttaa acttgattgt tggtttctca ggtcaatttt cacttggtca
     2941 tgctggtttt atggctattg gtgcttatgc agtaggtatc cttgggaaaa tgatgccaac
     3001 ttatggtgga tttgctatcg ccttgattgt tgggatgtta atctcaggtg cagtagctct
     3061 tttagtcggt attccaaccc ttcgtttgaa aggtgactac cttgcaattg cgactctcgg
     3121 tgttgcagag attattcgta ttttaattat caatggtggt agtgtaacga atggtgcagc
     3181 aggtattatg tctattccac tctttacaag ctggccttta gtttatattt ttgtaatcat
     3241 cacaaccttg gtgacagtta acttcctatg tagtccaatg ggacgtgcta caatttctgt
     3301 tcgtgaggat gaaattgcgg cagaatctgt aggtgtcaat ccaacatttg ttaaagtttc
     3361 agcctttgta tttggtgcta tgacggcagc cattgcaggt ggtctccatg caggatacgt
     3421 tgggacaatt gttccgaaag actttgcctt tatgacctcc gttaacgttt tgattatcat
     3481 cgtattgggt ggtttgggct ctatcacagg tacctttgta gcagccattg tacttggtat
     3541 tttgaacgta ttcctcaaga gttactctga tatttcaatg attatctatt cattagctct
     3601 tattctcttg atgattttcc gtcctggagg tcttttggga acgaaggaat tcagcgtagc
     3661 agctctactc aagaagaagg aggttaagta atggcattac ttgaagtaaa agatttaacc
     3721 aagaacttcg gtggcctgac tgccgttggt gacgtgacca tggaacttca tgaaggagaa
     3781 ttggttggtc ttatcggtcc aaatggtgct ggtaaaacga ctcttttcaa cctcttaaca
     3841 ggtgtttatg agccaagcga ggggacaatt tctcttgcag ggactatttt gaacggtaaa
     3901 gcaccatcaa aaattgcttc gcttggtcta ggtcgtactt tccagaacat tcgtttgttc
     3961 aaaaatatga ccgttttgga aaatgttttg attggtcttg gcaaccatgg taaatcagaa
     4021 gtatttgcaa gtttcttccg tcttccagca ttctataaga atgaagaagc gttgaaaaca
     4081 aaagcgattg aacttttgaa aatcttctat ttggatggag atgcagatac attagctaaa
     4141 aaccttcctt acggtcaaca acgacgtttg gaaatcgttc gtgcccttgc gactgaaccc
     4201 aaaattcttt tcttggatga gccagcggct ggtatgaacc cacaagaaac ggcagaattg
     4261 acccaactca tccgtaaaat caaagaagaa tttggcatta ctatcatctt gatcgaacac
     4321 gatatgagct tggttatgga agtaacggag cggatatacg tattggagta cggtcgtttg
     4381 attgcccatg gtacaccaga agaaattcgt aataacaagc gtgtaattga agcctacctt
     4441 ggaggtgaag cttaatggca atgttagaag taaaaaatct ttccgttaac tacggtgtta
     4501 tcgaagctgt taaagatgtt agctttgagg ttaatgaagg tgaagttgta acacttatcg
     4561 gcgctaatgg tgctggtaaa acctctatcc ttcgtactat ttcaggactt gttcgtccat
     4621 cagctggaac gatttctttc cttggaaatg agattcaaaa agttcctgct cgtaaaatcg
     4681 ttgcggacgg tttgtcgcaa gttccagaag gtcgacatgt ctttgcaggc ttgactgtta
     4741 tggaaaactt ggaaatgggt gccttccttc gcaacaatcg tgaagaaaac caagcaaact
     4801 tgaaaaaaat ctttgctcgt tttccacgtt tggaagaacg taaaaaccag gatgcagcta
     4861 ccctttcagg tggggagcaa cagatgttgg ccatgggacg tgccctaatg agccaaccaa
     4921 aactcttgct ccttgatgaa ccatcaatgg gcttggctcc gatctttatc caagaaattt
     4981 ttgatatcat ccaagatatt caaaaacaag gaacaactgt cctcttgatt gagcaaaatg
     5041 ccaacaaagc tctcgctatt gcagatcgtg gctatgttct agaaacagga aaagttgtcc
     5101 tctcaggaac aggaaaagaa ctcctcgcct cagaagaagt caaaaaagca tatctgggtg
     5161 gctaaaaagg tctgggggac ctttttaggt tggaaatgag aaccgctggt aagcggtttt
     5221 ctttatatca aggtctgggg gaccttttta ggtggaaata gggagtgttc tctcatgtta
     5281 ttgctatcta tgcagtggtc ttcaaatata gtataatgaa tgtatatttg gaggtttgta
     5341 tgattaaagt tgaagagatt ttatcgactc tatcaccgaa tcaaaaggtt aactatgata
     5401 aagtgtttca aaaaatggca agcacgtggc aggaagctgg gcttcgaccg aaaattctca
     5461 tgcatgtctg ttgtgcccca tgctcgacct atacattgga gtacttgact caatatgcag
     5521 atgtaaccat ctattttgcg aattccaata ttcatccaaa ggcggaatac cagcggcggg
     5581 cagccgtgac ggcccagttt gtcaaagaat ttaatcagaa aactggacag tcggtaggct
     5641 atctagaagc tgactatagc cctcaggaat ttttcaagaa aactcagcat cttgccaatg
     5701 agccagaggg aggagatcgg tgtaaggttt gctatgatta tcggttggat aagactgcgg
     5761 agaaggcagt tgagcttggc tttgacaatc agtccacata agaattcgca gaccatcaat
     5821 gctgctggga ttgaggtgca gaaattatac ggtacccagt atcttccgag tgactttaag
     5881 aaaaatggag gctatcagcg ttcagttcaa atgtgtgaag agtatgacat ttatcgccag
     5941 tgctattgtg gctgtgtcta tggggccaat gcccaaggtg tcaatctcgt acaggtaaaa
     6001 aaagaagcct tggaattttt aaaaacgcac agagattatt cccacattcc tttcaaggtg
     6061 ttggataaga attgagtttt tgagtttagt ttttacttaa ggagcgtttt ttcttgcttt
     6121 ctctatgaaa ttggtatata ctaattccgg ttaatatatt gtactactag gagaaaagca
     6181 aaatgaaatt gagaaaagta tcgtttattt tagttacctt tgtcatcggt ttactatcgt
     6241 tatcaagtgt aaaggcggag acttcgatgt ttgtaccagt aggtcaacag aatgttccgg
     6301 gggtagaagt agctcctttt agaactggtt cagactctat ccatgtccat gttggttcat
     6361 ttggttatgt tgctacatat ataaatggag aacgattgaa ggtcgagcct gtaaagcatg
     6421 aactcaagtg tccgagttat actacagaga attgccaaac taaagagtgg tatacaagtg
     6481 gggaacgtgc ggacggcagt ggagattatg ttgtaaaatt gaataagaaa ctcgaagaag
     6541 gtgatgttgt tacattaaaa tttgcagacg atgggaattt gtattttggt caattagtat
     6601 ataaaagtga aaagaagcga gttgaacaga ctcaaaagga acaagaggat gagtacgcag
     6661 atgccttgtt caaacgttct attgaggaag aagaaaataa gacttggaga gatcggataa
     6721 aggatacttt tcaagatgct tggtggaatt tcaaagggtg gtggaatagc taacaaagga
     6781 actgctattt ggaaaatagg tcatttggag tgattatcaa ttaatttttt ctaccttcct
     6841 gatataaatt tcaatgaaag agtccagact ttatgtctag gctctttttg tggtacaatg
     6901 agaaaagaat tttgaggttt ttatgacagt tattgaacag attgaacaat taaaaaaaga
     6961 gaaattagag cttctgaccg ttttatgcgg tgaagacatc ggacaatacc aaatagcgaa
     7021 agacttactt ctgcggaagc ttgattttga tgcggcagat ttaggttttg cctattttga
     7081 tatgtcggag gctgattatc atcaggtaga cttggactta gttgctcttc ccttcttttc
     7141 agatgaaaaa gtagtgattc ttgattattt tgcagattta acgacagata aaaaacggca
     7201 tttgacagat gatgaactca aacagtttga ggcctatttg gaaaatcctg tcgaaacaac
     7261 acgtttggtc attctagcac cgggtaagtt ggacagtaag cgtcgtctgg tcaaactcct
     7321 caaacgagat ggactagtat tagaagccaa tcctctgaag gagatggatt tgaaaaatca
     7381 tttccaaaag gagataatgc gtcttggatt gcagatggga ggagaggttt ttcaatatct
     7441 tttagaaaag tc
//
LOCUS       DASFQD010000110         7327 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.111, whole genome shotgun sequence.
ACCESSION   DASFQD010000110 DASFQD010000000
VERSION     DASFQD010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7327
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.111"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(222..986)
                     /locus_tag="U1021_001830"
     CDS             complement(222..986)
                     /locus_tag="U1021_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4712339.1"
                     /translation="MKRLLRRIRPTKPLKELTWIDLIIITTILCGNAIYTSTMQWIAS
                     FSATETVETGVLSFSPADNWWALANQGKLFLFALVYLLIRNYDFKQLKVKLEWTVLLW
                     GPLIFIGAGLISDLTFTAFSYIPGLSGGYNFLGYLPYYDWNIMTVLNRFLAVDYSTVI
                     YSLFNGFYEEFFFLGLLLSTDKKKRSLVLLFSTIVRISFHTYQGMVSALVIGVAFGLF
                     YYYMYTRKNDNLLPYFLGHALADMVGTSFFTLFIAG"
     gene            complement(1065..1748)
                     /locus_tag="U1021_001831"
     CDS             complement(1065..1748)
                     /locus_tag="U1021_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjG family noncanonical pyrimidine
                     nucleotidase"
                     /protein_id="HEM4712340.1"
                     /translation="MHYKHLLFDLDHTLLDFSRGEEVALTQFLTAMEVEDIQAFKEVY
                     RPLNQGMWKDLEKGNITKKELINTRFSRTFAHFGRQVDGREMALRYQEFIGRQGQIFT
                     GADKLLQELTHRGYQIYAATNGVTYIQKNRLLHSLIQSYFKEVFISEQMGTQKPATDF
                     YEKIAEQIAGFQFAQALMIGDSLTADIQGGNNAGMDTVWYNPTHKINNSKAVPTYTIH
                     SYQELLDLL"
     gene            complement(2370..3167)
                     /locus_tag="U1021_001832"
     CDS             complement(2370..3167)
                     /locus_tag="U1021_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM4712341.1"
                     /translation="MNQISISNLEFSYHPDKKILKGLNIILDERSTAIIGQNGAGKTT
                     FVKLLKGLIRPTAGKIMLNGQDLSEQSVAKIAKSIGLIFQNPDDQIFKHTVLDEIMFG
                     PLQMGMTHSQAEQAARKTMSLLGLDGFDKVNPYDLGLSDRKMVSIAAIVAMDTQVVIF
                     DEPTIAQDDAGKKQIQSVIQLLREQGKIVISILHDMDFVAETFERALVFAQGEVLLDG
                     SVREVFSQKDVLEKAYLSQPTTMQLCQALGYDDVFLTPEEFIAYKQE"
     gene            complement(3154..4017)
                     /locus_tag="U1021_001833"
     CDS             complement(3154..4017)
                     /locus_tag="U1021_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM4712342.1"
                     /translation="MAHIKIENLKYQYPFAEKLALDGITCEIRPGEFIGVIGRNGSGK
                     STFCQSLTGLVPNFYRGSYGGKVWIDQSEVKRVEVDDLCQKVGSVFQNPFNQITGSKA
                     TVYEEIAFGLENFGVPKEEMEVRIEESLRLLDIEEYRDRAPFDLSGGQMQRMAIASIM
                     AMKPEVIILDEPTSQLDPQGSEAVFKAIQSLSKQGITVIMVEHKVEKIAAYSDRVMLL
                     DQGKLIAMDTPQAVFSRPDLEKYGVVAPTFTRICKQLGMKLPGSSYYPVTLEEASQLL
                     AKNKGEMYESN"
     gene            complement(4017..4781)
                     /locus_tag="U1021_001834"
     CDS             complement(4017..4781)
                     /locus_tag="U1021_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HEM4712343.1"
                     /translation="MKTMSLFEDKNSFLNNLSPLTKMLYVLATILIPIIAGDLAVFSI
                     TILLSVVLLAHSKVLRQTLPILSVSGFVILTVGIIQGLFRSGNVTPVFQLGPVIFYKE
                     GLLFAAEIALNVCNIILAFCVLILTTKSSDMIEELVRKGFSPRMGYVFVSLFQLIPQM
                     TSRMATITDAQRSRGMETEGSMLVRLKAFLPLVSPVIMSSFIDTRERAIALEVRGFNS
                     KSKKTFINPPIRSQFDRLIQIFCIFGVVLAIVWRVL"
     gene            complement(4792..5403)
                     /locus_tag="U1021_001835"
     CDS             complement(4792..5403)
                     /locus_tag="U1021_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HEM4712344.1"
                     /translation="MNWRNNNPLSLKFNTAALVLIPAGVGINYIGKLIAGVLKLPLWL
                     DSIGTCLSACLAGPIVGAVVGIMNNLIYGLTVDPISTVYALTNAALGIAVGLLAYYGS
                     MKNIRGALFTGIVAGFAAVLVSTPLNMIFWGGTTGNLWGDLVYAGLLAQKFPVWFASF
                     MDEIVVDIPDKIVVLLLVLSLYKSLPKSLLSLYQSNSVIKNLD"
     gene            complement(5408..6154)
                     /locus_tag="U1021_001836"
     CDS             complement(5408..6154)
                     /locus_tag="U1021_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside phosphorylase"
                     /protein_id="HEM4712345.1"
                     /translation="MVLQPDIRCDIEQGARYAILPGDPQRVDRVAEFLDSVEFIAFNR
                     EHKTMRGSYKGVPVLVTSTGMWGASTGIAVEELARIGVECMIRIGSCGALQPEMQMGD
                     LVILNGAVRDEGTSRAYVDPIFPVVPDPDVLFALRGTAMNQGFAHHVGIARSHDSFYI
                     DNELEVDHFWSKKGVLAGDMESAALFTIGSLRGIKTGSILNTVALYDGELKDEINQYV
                     SGENRVTQGEKNEILTTLEAIVMLEKQRKG"
     gene            complement(6166..6845)
                     /locus_tag="U1021_001837"
                     /pseudo
     CDS             complement(6166..6845)
                     /locus_tag="U1021_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775052.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
BASE COUNT         2367 a         1570 c         1095 g         2295 t
ORIGIN      
        1 ataaaaatac attttaacat aaataaacca ttaattcaaa aaaatatggg ataaaaaata
       61 tgataaagta atcgaaattt gactgaacag attaaatata tcagcacaat aaaacgggtg
      121 atgataccga gttgatagaa actacatatc atcatccgtt tgtcagctgt agggagaaag
      181 aaattttatc cgattagctt gatgtccgtt cttcacattg tttaccctgc aataaacaat
      241 gtgaagaaac ttgtaccaac catatccgca agagcatgtc ctaagaaata tggcaataaa
      301 ttatcatttt tccttgtgta catgtagtaa tagaaaaggc cgaaggctac accaataaca
      361 agagcagata ccattccttg ataggtatgg aaagatatac gtacaattgt tgaaaagagt
      421 aagaccagcg aacgcttttt cttatctgta ctcaacaata agcctaagaa aaagaactct
      481 tcatagaagc cattaaacaa ggaatagata actgtgctgt agtcaacggc taggaaacgg
      541 ttgagcactg tcattatatt ccagtcatag taaggcaagt atccgaggaa attataccca
      601 ccagacagac ctggaatata tgaaaaagct gtaaatgtca aatcgctaat caggcccgca
      661 ccaatgaaaa tcagtggtcc ccagagtaga acggtccatt ctaattttac ttttagctgc
      721 ttgaaatcat aattccgaat caataaatac accagggcaa acaggaataa ttttccttga
      781 ttggctagag cccaccaatt atcggctgga ctaaacgaca gaactcctgt ttcaacggtt
      841 tctgttgcgg aaaatgatgc tatccattgc atggttgagg tataaatagc attaccacat
      901 aaaatcgttg tgataataat caaatctatc caagtgagtt cttttagggg ctttgttgga
      961 cgaatgcgtc tcagtaatct tttcactttt tcctccttat atttttgtat atattctttc
     1021 tgtataatta tatactaaaa tccttataag tttcttaaaa tatcttataa caaatctaat
     1081 aattcttgat agctatgaat ggtataggtt ggaactgcct tactattatt tatcttgtga
     1141 gtcggattat accaaacagt atccatacca gcattatttc cgccttgaat atctgctgtc
     1201 aaactgtctc caatcattaa ggcttgggca aattgaaaac ctgcaatctg ctctgctatt
     1261 ttttcataaa aatcagtcgc aggcttttgc gtccccatct gctcagaaat aaatacttct
     1321 ttaaaatacg attgaatcag tgagtgaagc aagcgatttt tctgtatata ggtcacgccg
     1381 ttggtcgctg cataaatctg gtagcctcgg tgtgtcaatt cctgcaaaag cttatctgca
     1441 cctgtaaaaa tttgtccctg ccgcccaata aattcttggt agcgcaaggc catctccctt
     1501 ccatcaactt gccgaccaaa gtgggcaaag gtccgtgaaa agcgggtgtt tattagctct
     1561 ttctttgtaa tgttcccttt ttccaaatcc ttccacatgc cctgattgag cggtcgatag
     1621 acttctttaa aagcttgaat atcttcaacc tccatagctg tcaaaaactg ggttaaggct
     1681 acttcttctc cacggctaaa atcaagaaga gtatgatcaa gatcgaataa taaatgtttg
     1741 tagtgcaatt ttgggatttt cctctctaaa aacaccctct atttgagtga aatcaattcg
     1801 tttctaatct atagtgatca tcgtaaaatt catttttaag aaccgctcct ttttaaaccg
     1861 cttagcctca gatatatctt ggctttctgt attttatcgg cagatagccc ttatatcagt
     1921 gtgtattatc ttgatagata gcacaactaa gtactcaagt atagacatct tattgataaa
     1981 gtttttgaat tcaactagat ctttatagta ataattatat catactaaaa aatacaaagg
     2041 ctataatttt ccatcaaagt ttcaatgtga aatatttacc ctctatccac aaatcaagtc
     2101 ttctaaatta aatggaaaaa tatatacatt tgtaaaatta taaaattttc tgattcaaat
     2161 ttttaattta caaatttata gtgatacaga aaggagaacc tcgtccgctt caaaaagatt
     2221 aaaagaatag aaacagaact acctcaatct gcaatctctc acaaacttag aattagacta
     2281 atatcgttca ataattagga agcagtatag aataacatta taaaaaccaa gcggttacca
     2341 ggaatctcct agattgtaat ttaagtacat cactcctgtt tgtaagctat gaactcttcg
     2401 ggagtgagaa aaacgtcatc atagcctagt gcttgacata attgcatcgt ggttggctga
     2461 gatagatagg ctttttcaag gacatctttc tgtgaaaaaa cctctcgaac acttccatct
     2521 aacaaaactt ctccttgtgc aaagacaagg gcacgttcaa acgtttctgc tacgaagtcc
     2581 atatcatgca aaatggaaat aactattttt ccttgttctc tcaacaattg tatcaccgat
     2641 tgaatctgtt tttttcctgc atcatcttga gcaatcgttg gttcatcaaa aatcacaacc
     2701 tgtgtatcca tagcaactat tgcagcgatt gacaccattt ttctatcgga taatcctaag
     2761 tcgtagggat ttaccttgtc aaatccatct aagcccagca aggacatagt ttttctagct
     2821 gcctgttctg cttgagaatg agtcatgccc atttgcaatg gtccaaacat aatttcatct
     2881 aataccgtat gtttaaaaat ttggtcatct ggattttgaa aaatgagtcc aatactttta
     2941 gcaattttag cgacagattg ttcgcttaaa tcttgtccat ttaacataat tttaccagcc
     3001 gtcggacgaa taaggccttt cagtaacttt acaaatgtag tctttccagc accattttgt
     3061 ccaataatcg ccgtcgaacg ctcatctaaa ataatattca acccttttaa tattttttta
     3121 tccggatgat aggaaaattc taagttacta atactaattt gattcataca tttccccctt
     3181 attctttgcc aacaactgac tagcttcctc aagtgtcaca ggataatagg aacttcctgg
     3241 tagcttcatg cctaactgct tgcatattct agtaaaggta ggtgctacaa ctccatactt
     3301 ttctagatct ggtcgagaaa acacggcttg tggtgtatcc atggcaatta gttttccctg
     3361 atcaagcaac attacccggt cactgtaagc tgcgattttt tcaaccttat gttccaccat
     3421 aattacagtg atgccttgct tacttaaaga ctgaatagct ttgaaaactg cctcactacc
     3481 ttgtggatcg agttgagaag ttggctcatc taaaataatg acctctggtt tcatcgccat
     3541 aatgctagca attgccattc gttgcatttg tcctcctgac aagtcaaacg gagctcgatc
     3601 acggtactct tcaatgtcca acaaacgtaa actttcctca attcgaactt ccatttcttc
     3661 ttttgggact ccgaaattct ccaaaccgaa agcaatttct tcatacacag tcgccttaga
     3721 acctgtaatt tgattaaatg gattttgaaa aacgcttccg actttttggc acaagtcatc
     3781 aacctctacc ctcttcactt cggattgatc aatccatacc tttcctccat acgaaccacg
     3841 gtaaaaattc ggaacaagtc ctgttaatga ttgacagaat gtcgattttc cagaaccatt
     3901 tcgaccaatt accccaatga attcacctgg acgaatctca cacgtgatgc cgtctagagc
     3961 caacttttca gcaaagggat attggtattt tagattttca attttaatat gtgccattat
     4021 agaaccctcc agacaattgc tagcacaact ccaaaaatgc agaaaatttg aatcaatcga
     4081 tcaaattgcg aacgaatcgg tggattgata aatgtctttt tagattttga attaaatcct
     4141 cgaacctcta aggcaattgc gcgttctctc gtatcaataa aagaactcat aattacagga
     4201 gagaccaatg gcaaaaaagc ttttagccga accaacatcg aaccttctgt ttccatccca
     4261 cgacttcttt gtgcatccgt aattgttgcc attcggctcg tcatctgagg gattaattgg
     4321 aacaaggaga caaacacata tcccattcga ggtgagaagc cttttctaac taattcttca
     4381 atcatgtccg acgattttgt cgttaaaatc agaacacaga aagctaaaat aatattacat
     4441 acatttaaag caatctcagc tgcaaatagc aagccttcct tataaaaaat gactggacct
     4501 aattgaaaaa caggcgtgac attaccactt ctaaacaatc cttgaataat tcctaccgtt
     4561 aaaataacaa acccagatac actcagaatt ggtaaggtct gccttaacac tttagaatgt
     4621 gctaacaaaa cgacacttaa aagaattgta atgctaaata cagctaaatc acctgcaata
     4681 atcggtatca gaatggtcgc aagcacatac aacatcttag ttaacggaga caaattattc
     4741 aaaaatgaat tcttgtcttc aaacaaactc atcgttttca tggagacctc cttaatctag
     4801 gttcttaatc acactattac tttggtaaag cgatagtaga ctctttggta aactcttata
     4861 caagcttagc acaagtaata atacgactat tttatctgga atatctacca ctatttcatc
     4921 cataaacgat gcaaaccaaa ctgggaattt ttgagctaat agacctgcat aaaccaagtc
     4981 tccccataaa tttccggttg taccacccca aaagatcata ttcaatggcg ttgataccaa
     5041 gactgctgca aatccagcaa caattcctgt aaataaggca cccctgatgt tcttcatact
     5101 accgtaataa gccaataaac cgactgcaat tcctagggct gcattggtta aggcataaac
     5161 tgtagaaatc ggatccaccg ttaatccata aattaaatta ttcataattc ccacaacagc
     5221 acctacaatt ggaccagcca aacaagccga taaacaagtt ccaatcgaat ctaaccaaag
     5281 tggtaatttg agaacccccg caatcaattt accaatataa ttaatcccaa cccctgccgg
     5341 aatcaacact aaagctgcag tattaaactt caatgataat ggattattat ttctccaatt
     5401 catgattcta tcctttcctt tgtttttcta gcatcacaat cgcttccaat gtcgtaagaa
     5461 tttcattttt ttcaccttgt gtcacacgat tttcgccaga cacatattgg ttgatctcat
     5521 ctttcaattc accatcatat agtgccactg tatttaaaat ggagcccgtt ttaatcccac
     5581 gtaggctacc aatagtaaat aaagctgcac tttccatgtc tccagctaat acaccttttt
     5641 tagaccaaaa atgatcaact tccaactcat tatcaatata aaaactatca tggcttctag
     5701 caattccaac gtgatgggca aaaccttggt tcatagcagt tcctcgtaag gcaaataaaa
     5761 catcagggtc tggaaccacc ggaaaaattg gatcaacata cgccctagaa gtcccctcat
     5821 cacgtacagc cccattcaaa atgaccaaat ctcccatctg catctccggt tgcaatgctc
     5881 cacatgagcc aatccgaatc atacattcca caccgatacg tgccaactct tctaccgcga
     5941 ttcctgttga agcaccccac atccctgtag aggtaactaa cactggaacc cccttatagc
     6001 ttccacgcat tgttttgtgt tcacgattga atgctataaa ttctacacta tctaaaaact
     6061 ctgctactct gtccaccctc tgtggatcgc ccggcaatat ggcgtatctt gcaccttgtt
     6121 ctatgtcaca acgaatatct ggttgtagta ccatctttct ttctcctaat ctagtaaact
     6181 cgttaaagct tggtggtcca atagttgaat cttaccatga cctaaatcga tgatttgctt
     6241 ttctttaaat tcttttaaca atcgattgat actccgttgg gtaaccgcca tctcttgact
     6301 caatctttcc gaattaaact gtaatgatgc taattttttt cctccaaatt gctccagcaa
     6361 atagtatgca agtcgagtcg ctgtctaaga tcatatagac tattgcgctt catacgatta
     6421 cacatacgat aggaattttc acaaatcttc ttaataaaca aactactaaa gttttgatct
     6481 aatgccatcc aactcgaaag tgtatcttta tctatttcca aagcgataat atcaccaact
     6541 cctttcacat aactaatata cggaacttgt tgaaatattt ccatttctcc aatcaagtca
     6601 ccagactgac tacaacaaag aaaatatttt ttcccatttt ccgattccga gtaaacattg
     6661 accctcccct caacaataat atacatatac tgatagatct ccccttgctc caactcaaat
     6721 tcaccatctt cgaatctctt gacatgtatt ttacgcaaga tttcatatgg gcaaagcttt
     6781 agtaatgaat atacatctgg attcatctcg attatatcca atagtagatg cattttcaaa
     6841 atcatacacg ctcctttctt tattgttacc acaacaatga taacgctttc ttttttgcaa
     6901 gtaaaggaat tccgtccgat tcaatagcaa aaaaacatat ccaatgtcat aatacacaaa
     6961 cattttaagg acaaatgtct tcttgtttta cgatttgttc cagatttcta agccatactt
     7021 tataaataaa ttttgataaa atcttcctaa ttccaagagc ttttaaactc taatttgtat
     7081 tacttaactt ctactcattt cgaatgatga atgtttgtat tgctaaatgc ggattccatt
     7141 acaaaagatg attttatttt ttgtgaagta gtcagatttt ctgaaatatt taacacttat
     7201 ttatataaca taataaaatt gcgctatttt taaggctttt gatttttgta aagtagaaaa
     7261 actatttttc ttgccactaa tatcaactaa gaattcgttt taatatcaaa tgaaaagacc
     7321 caaattg
//
LOCUS       DASFQD010000111         7267 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.112, whole genome shotgun sequence.
ACCESSION   DASFQD010000111 DASFQD010000000
VERSION     DASFQD010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7267
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.112"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(205..1329)
                     /locus_tag="U1021_001838"
     CDS             complement(205..1329)
                     /locus_tag="U1021_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM4712346.1"
                     /translation="MKRKRTNKPQHMRRKRKTPIMKNNKKMLYTSSLALSLFSTGMIS
                     TNVLAIEWAPRTVSEISPEIVQEEGKMTYTVQYGDTLSAIASAMNIDMDLLAKINQIA
                     DVNLIFPDTVLTTTVDLTTNQVTQVEIEAPVQGNTNETVQATVDLTTNQVTVEDTVVP
                     LDQISSVTDSAPVEEVVEQPVAEASVEEVVEQPVAEASVEEVVEQPVVEAPVEEVVEQ
                     PVVEAPVEEVAEQPVVEAPVEQPVVETPQVTALSTTTTSTSAYDVGLQPQVAAFRAEV
                     ANAFGITSFSGYRPGDSGDHGKGLAIDFMVPQSSALGDQVAAYAVVNLASKNINYIIW
                     KQRFYAPYDSIYGPAYTWNLMPDRGSVTENHYDHVHVSFN"
     gene            complement(1672..2655)
                     /locus_tag="U1021_001839"
     CDS             complement(1672..2655)
                     /locus_tag="U1021_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM4712347.1"
                     /translation="MEVQMKYKWATLGTGVIANELVQALQDMGGNLYSVANRTYDKGV
                     EFAQKYGIEKVYREIDEVFEDPEVDIIYISTPHNTHINYLRKALKAGKHVLCEKSITL
                     NSEELAEAIQLAEENQVILAEAMTIFHMPIYRQLSEVVASGKLGDLKMIQMNFGSYKE
                     YDMTNRFFNKNLAGGALLDIGVYALSFVRWFMTEKPSQVLSQVKLAPTGVDEQVGILL
                     SNDAGEMATTALTLHAKQPKRGTIAYDKGYIELYEYPRGQKAVITYTEDGSQEVIEAG
                     ETARALSYEVADMEKAVAGIENTMHLAFTQDVMEIMTQLRKEWGLVYPEEM"
     gene            2740..3630
                     /locus_tag="U1021_001840"
     CDS             2740..3630
                     /locus_tag="U1021_001840"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000146880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HIII"
                     /protein_id="HEM4712348.1"
                     /translation="MNTVVLKASAQQKQAMMAHYDRYRQTSKNPYIEAFFKLTGASLS
                     IYTSGKVVFQGEMAEQEAGVWGYEPESSGQTTIPGQNLPMIGTDEVGNGSYFGGLAVV
                     ASFVRPEDHAFLKSLGVDDSKKMTDQKICQIAPLLKEKIPHQALLLSPKKYNEVIEQG
                     YNAVSVKVALHNQAIFLLLQKGVQPEKIVIDAFTSSQNYQKYLKKEANQFANPVTLEE
                     KAEGKYLAVAVSSIIARAMFLENLVQLGQLVGMNLPSGAGSKSDQVAASILKQYGMAG
                     LNQTAKLHFANTQKAQKLLK"
     gene            3640..4269
                     /gene="lepB"
                     /locus_tag="U1021_001841"
     CDS             3640..4269
                     /gene="lepB"
                     /locus_tag="U1021_001841"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEM4712349.1"
                     /translation="MGAIQKTKRSPLVAFLAEWGIFLLFMAAFFASRYFIWNPVSVDG
                     HSMDPTLQHQEKLIMLKTTSIDRFDIVVASETDSDGKEKLIVKRVIGMPGDTIRYEND
                     VLYVNDQKVDEPYLDEYLAAFQKDKLQEVYSYNKQFQAVAQSAEAFTQDANGYVDFTV
                     TVPEGQYYLMGDDRLVSLDSRSVGTFSRENIKGEVVFRMWPLNRIGTVD"
     gene            4333..6822
                     /locus_tag="U1021_001842"
     CDS             4333..6822
                     /locus_tag="U1021_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RecD-like DNA helicase"
                     /protein_id="HEM4712350.1"
                     /translation="MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVT
                     GTIADVIEGEDYRFYGNLVTHPKYGQQLQISRYERSKPTSAGLVKYFSSEHFKGIGRK
                     TAEKIVELYGEDTIDKILAEPEKLTQITGLSSKNMQAFVEKLRLNYGTELILAKLAEY
                     GIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRF
                     RAGMLFSLIHRSMETGDTYVEARDLLEATLELLEKSRHTELDPAAVAKELTGLIADDK
                     VQQEGTKIFDNSLYFAEHGIHTNLTRLMGKNGFKPFPRADVEAAIAELESISSLTYDN
                     IQKEAIVQAITNPLFILTGGPGTGKTTVINGIIAVYAILHKIDLTRNREECPVLLAAP
                     TGRAARRMNELTGLPSATIHRHLGLVEGQEESYRDDYLDADFIIVDEFSMVDTWLANQ
                     LFQNISSQTQVLIVGDAEQLPSVSPGQVLADLLKIDKLPSITLERIYRQSDDSTIVTL
                     ASQIRQGALPSDFREKKADRSYFEAQNEQIPALIERIVGAAIKSGIPANEVQILAPMY
                     RGAAGIDQLNTMTQALLNPLEEGELEFLHNEQAFRQGDRVIHLVNDAEANVFNGDLGY
                     ITDLLPAKYTDSKQDEITINFDGSEVTYPRNEWYKITLAYAMSIHKSQGSEFQVVILP
                     ITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAVKNAGTVRKTYLVPRFQGEMA
                     EQESKESLIKKDESKTATTTQTQPPTQPDRKEQVKVVKENNQQLSLLDQDQPKKTSPQ
                     PTEYILTVDNLLTIDPMIGIEQADIEEFFKA"
     gene            complement(6861..>7267)
                     /locus_tag="U1021_001843"
     CDS             complement(6861..>7267)
                     /locus_tag="U1021_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEM4712351.1"
                     /translation="LAVIAIADKVKETSRQAVQALQTMELEVVMLTGDNEKTAQAIAK
                     EVGIEQVVSQVLPDDKANQVKFLQEQGKTVAMVGDYDHAFGKSYGVLMREWNLLARAV
                     FVLNADNEIVYVEYLDNVNEHPDYKAALEAVK"
BASE COUNT         2048 a         1801 c         1486 g         1932 t
ORIGIN      
        1 tttggtacat cgccactttc ggcttgccat actctacgaa agtgacttgt ttcgcaagtc
       61 ttattttcaa cctagaacag cctctaggct gttctagcta cctgcacctc agttccttgt
      121 ctgaaagttc attcattcga ctatattact acatataaag caataaccgt ttcagataag
      181 gctgaaacgg ttatttttgt aagtctaatt aaaagataca tgcacatgat cgtagtggtt
      241 ttctgtaacg ctaccacggt ctggcatcag attccatgta taggctggac catagatact
      301 gtcatacggc gcatagaagc gctgtttcca aatgatgtag ttgatatttt tagaagctaa
      361 gtttacaact gcataagccg ccacttgatc cccaagtgct gaactttgtg gtaccatgaa
      421 gtcaattgcc aatcccttac catggtcgcc agaatcacca ggacggtaac ctgagaaaga
      481 agtaataccg aaggcattag ctacttctgc gcggaaggct gctacctgag gttgcaaacc
      541 gacatcataa gcacttgtac ttgttgtagt ggttgatagg gctgtcactt gtggagtttc
      601 aactacaggc tgttctacag gtgcttctac gacaggttgt tctgcaactt cctctacagg
      661 tgcctcaacc acaggttgct ctacaacttc ctctacaggc gcttctacta caggttgctc
      721 tacaacttcc tctacagacg cttctgctac aggctgttct acaacttcct ctacagacgc
      781 ttctgctaca ggttgctcca caacttcctc tacaggtgct gagtcggtaa ctgatgaaat
      841 ttgatccaac ggaacaaccg tatcctcaac cgttacttga ttggttgtta ggtcaacagt
      901 tgcctgaacg gtctcatttg tgtttccctg aacaggagct tcaatctcaa cctgagtcac
      961 ttgattggtt gttaggtcaa cagtcgtcgt cagtaccgta tcagggaaaa tcaagttgac
     1021 atctgcaatt tgatttattt tcgccagcaa gtccatatca atattcatag ctgaggcgat
     1081 ggcagataag gtatctccat actgaacagt ataggtcatc tttccttctt cttgtacaat
     1141 ttctgggcta atttcagaaa cagtacgtgg agcccattcg atggctaaaa catttgtcga
     1201 aatcatccct gtactaaaga gggaaagagc caatgaagat gtgtataaca tcttcttatt
     1261 gtttttcatg atgggtgttt ttctcttgcg acgcatatgt tgtggtttat ttgttctctt
     1321 acgtttcata atcttattcc ttctttattt ttgagatggt tctatcttac ctaaattaaa
     1381 tctgaaaaac aagccttcaa cctttctttt aaataaactg tctccactat gtaatcttag
     1441 gacttttctg tcacacaatc aatataaatg tcatctgact gtcatattat tagataatac
     1501 tcaatgaaaa tcaaaaacag actcggagat gcagatagaa ctaacgttca ccaaatcaag
     1561 tcaacaacgt ctggattttc gaagactata attaaaaaat aagagtaagg cagtaatcca
     1621 acaattggct actagctcac tctcatttct attttcggat tagtcaagat cctacatttc
     1681 ttcaggataa accaagcccc attctttacg gagttgggtc ataatctcca taacatcttg
     1741 ggtaaatgct aggtgcatgg tgttttcgat gcctgcgaca gctttttcca tatccgccac
     1801 ttcataagaa agggccctgg ctgtctcgcc cgcttcgatt acctcttggc taccgtcttc
     1861 agtataggta atgactgctt tctgaccacg tgggtactcg taaagctcga tgtagccttt
     1921 atcgtaggca atagtgcccc gttttggctg tttggcatgg agggtcaggg cggtggtcgc
     1981 catttctcct gcatcattgc tgagcaaaat ccctacctgc tcatccacac ctgtcggagc
     2041 caatttgacc tgagacaaga cctggctagg cttttccgtc ataaaccaac ggacaaagga
     2101 cagagcgtag acaccaatat ccaagagggc accgccggcc aagttcttat tgaaaaagcg
     2161 gttggtcatg tcgtattcct tgtagctgcc aaagttcatc tgaatcatct tcaaatctcc
     2221 cagcttgcca ctggcaacca cttcgctcaa ctgacgatag attggcatgt ggaaaatggt
     2281 catggcttct gccaggataa cctgattttc ttctgccagt tgaatggctt ctgctaattc
     2341 ttctgaatta agcgtaatag acttttcaca gaggacatgc tttccagcct tcaaagcttt
     2401 tctcaaataa ttgatatggg tattgtgagg cgtagaaata tagataatgt ctacttcagg
     2461 atcctcaaac acttcatcga tttctcgata aactttctcg atgccatatt tttgcgcaaa
     2521 ttccacaccc ttgtcatagg tacggttggc taccgaataa agatttcctc ccatatcctg
     2581 caaggcctga accaattcgt tggcaatgac acctgttccc agagtcgccc atttatactt
     2641 catttgcact tccatagtgt acctcacttt cttctaccat tatagtaaat tccacccttt
     2701 tctgcacact ctaactagca tttgtgttac aataagaaca tgaataccgt tgtactaaag
     2761 gcctctgccc agcaaaaaca agccatgatg gctcactatg accgctatcg gcagaccagc
     2821 aaaaatcctt acatagaagc atttttcaaa ctgaccggtg ccagcctgtc catctacact
     2881 tctggaaaag tcgtttttca gggggaaatg gcagagcagg aagcaggggt ctggggctat
     2941 gagccagaaa gctctggaca gacgaccata cctggtcaaa acctgcccat gattggtacc
     3001 gatgaggttg gaaacgggtc ttattttgga ggtttggcag tcgttgctag ttttgtccgc
     3061 ccagaagacc atgcctttct caagtcgctt ggtgtggatg attctaagaa aatgacagac
     3121 caaaaaatct gccaaatcgc tcctctctta aaagagaaaa tcccccacca agctctgcta
     3181 ttgtcaccga aaaaatacaa cgaagtcatc gagcaaggct acaatgcggt gtctgtcaag
     3241 gtggccctac acaatcaggc tattttccta ctcttgcaaa agggtgtcca gcctgagaag
     3301 attgtcattg atgccttcac ttccagtcaa aattatcaaa agtacttgaa gaaggaagcc
     3361 aaccaatttg ccaaccccgt cactctagaa gaaaaggctg agggcaagta tctggctgtg
     3421 gcagtatctt ctatcattgc tagagctatg tttttagaaa atcttgtcca gcttggtcaa
     3481 ctagttggga tgaatctgcc gtctggtgcg ggcagtaaat ccgaccaagt cgcagcaagc
     3541 atcttaaaac aatatggtat ggctggtctc aaccaaactg ccaaactcca ctttgccaat
     3601 acgcaaaaag cacaaaaatt attgaaatga ggaaaaaata tgggagcaat ccaaaaaaca
     3661 aaacgctcac cactagtcgc cttcttagct gaatggggca tctttttact gtttatggca
     3721 gctttttttg ccagtcgata ctttatctgg aatcctgtct ctgtcgatgg ccattccatg
     3781 gacccaacgc ttcaacacca agaaaaactc atcatgctaa aaacgacctc tatcgaccgc
     3841 tttgatattg ttgtagccag tgagacagac agcgacggca aggaaaaact gattgtcaaa
     3901 cgtgtgattg gtatgccagg tgacaccatt cgctacgaaa acgatgtcct ctatgttaac
     3961 gaccaaaaag tggacgagcc ttacttagat gaatatctag ctgcattcca gaaagataaa
     4021 cttcaagaag tctattctta caacaaacaa ttccaagctg tggcccaatc tgctgaagct
     4081 ttcacacaag atgccaatgg ttacgtagac tttaccgtga cagtaccaga aggacaatac
     4141 tacctgatgg gagatgaccg ccttgtctca ctagatagtc gtagtgtagg aacattttcc
     4201 cgtgaaaaca tcaaaggaga agttgtcttt cgcatgtggc ctctcaaccg tattgggact
     4261 gttgattaat acaaacaagt ttggagcaat ccgttccaaa cttctttttc attattattg
     4321 gaactaaact ctatgaacga agtgtatttt accggcacta ttgaccggat tatttttgaa
     4381 aatcctagta atttttataa aatccttctc cttgaaatcg aggagacaga cgcagactat
     4441 gatgactacg aaattattgt gaccggaacg attgccgatg tcattgaagg agaagactat
     4501 cgtttctatg gcaatctggt cacccatccc aagtatggtc agcagctgca aatttcgcgt
     4561 tacgaacgca gcaagcctac ctcagctggt ctggtcaagt atttctccag cgagcatttc
     4621 aagggaattg gacgcaaaac agctgaaaaa atcgttgagc tctatggcga agataccatt
     4681 gataagattt tagctgaacc tgaaaaacta acccaaatca caggcctatc cagcaagaac
     4741 atgcaggcat ttgtcgaaaa actccgcctc aattatggaa ccgagttgat cttggcaaaa
     4801 ctagccgagt atggcattcc caataaattg gcctttcaaa tccaagacca gtataaggaa
     4861 aaaacacttc agattattga agaaaatccc tatcaactgg tcgaagatgt ccaggggctc
     4921 ggctttacca ttgccgatag gattgcggaa aatctaggaa ttgccagtga ttcaccccaa
     4981 cgttttcggg ctggcatgct ctttagtctc attcatcgct ccatggaaac aggcgatacc
     5041 tatgtggagg ccagagactt gctggaagca acccttgaac tgctggaaaa atcccgccat
     5101 acagagctgg accccgctgc tgttgccaaa gaattgacgg gactgattgc agacgacaag
     5161 gtacagcaag aaggcacaaa gatttttgac aacagcctct actttgccga acatggtatc
     5221 catacaaacc taactcgcct gatgggaaaa aacggcttca agcccttccc acgcgcagac
     5281 gtcgaggctg ccatagcaga gctggaaagc atatcttctc tcacctacga taacattcaa
     5341 aaagaagcca ttgtccaagc cattaccaat ccgcttttca ttctgacagg cgggccaggg
     5401 actggaaaga caaccgttat caacggtatt atcgcggtct atgccatctt gcataagatt
     5461 gacctgactc gcaaccgaga agaatgccca gtcctcctag ccgctccaac tggacgagca
     5521 gccagacgga tgaatgaatt gacagggctg ccttccgcca ccatccaccg ccatctcggt
     5581 ctggtagaag gacaggagga atcctaccgt gatgattatt tggatgccga ctttatcatc
     5641 gtggatgagt tttctatggt agatacttgg ttggcaaacc agctcttcca gaatatctcc
     5701 tcccagaccc aagttctgat tgtcggcgat gccgagcaat tgccttctgt cagccccggt
     5761 caagtacttg ctgacctctt gaaaattgac aagctgccca gcattactct agaacgtatc
     5821 tatcgtcaat ccgatgattc gaccattgtt accctagcca gccagattcg acagggtgct
     5881 ctgcctagcg attttcgtga gaaaaaggct gaccgttcct attttgaagc ccagaatgaa
     5941 caaattccag ccctgattga gcgcattgtc ggcgcagcca tcaagtcagg tattcctgca
     6001 aacgaggtac agatcctcgc tcccatgtac cgtggggccg caggcatcga ccaactcaac
     6061 actatgaccc aggccctgct caatccactg gaagagggag agttagaatt cctgcataac
     6121 gagcaagcct tccgccaagg cgaccgggtc attcatttag tcaacgatgc cgaggccaat
     6181 gtcttcaatg gtgatttagg ctacatcacc gacctccttc ctgccaagta caccgactcc
     6241 aagcaggacg aaattaccat caacttcgac ggtagcgagg tcacctatcc ccgaaacgaa
     6301 tggtacaaga ttaccctggc ctatgccatg tccatccaca agtcccaagg cagcgagttt
     6361 caggtagtca tcctccccat cacccgcacc agccaccgta tgctccagcg caatctggtc
     6421 tacaccgcca tcacccgctc caagagcaag ctcatcctcc taggcgaaat ctccgccttc
     6481 gactacgccg tcaaaaacgc cggcaccgtc cgaaaaacct atctggtccc acgtttccaa
     6541 ggggaaatgg cagagcagga aagcaaggaa agcctgatta aaaaagacga aagcaaaaca
     6601 gctacaacca cgcaaaccca gccccctact cagccagaca gaaaagaaca ggttaaagta
     6661 gtcaaagaaa acaaccaaca actctccctt cttgatcaag accagccaaa aaaaacaagt
     6721 ccccaaccca cagaatacat tttgactgta gacaacctac taaccatcga ccccatgatt
     6781 ggcatagaac aggcagatat tgaagaattt tttaaagcat aaaaaccagc aagtcagtag
     6841 atgaacaccg ttatattctt ttatttgaca gcctctaaag ctgctttata atctgggtgt
     6901 tcgttgacat tgtctaggta ttctacgtag acgatctcat tgtcggcatt aaggacaaag
     6961 accgcacgcg ccagcaaatt ccactcccgc atgagcacac cgtaggattt tccaaaggca
     7021 tggtcatagt cccctaccat ggcaactgtc ttgccctgtt cttgtaagaa cttgacttgg
     7081 ttggccttgt catctggcag gacctgactg accacctgct caatgccgac ttccttggca
     7141 atagcctggg cagttttttc attatctcct gtcagcatga caacctctag ttccatggtt
     7201 tgcagagcct ggacagcctg acggctggtc tcttttactt tatcagcaat ggcaatgact
     7261 gctagta
//
LOCUS       DASFQD010000112         7056 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.113, whole genome shotgun sequence.
ACCESSION   DASFQD010000112 DASFQD010000000
VERSION     DASFQD010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7056
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.113"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            111..452
                     /locus_tag="U1021_001844"
                     /pseudo
     CDS             111..452
                     /locus_tag="U1021_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028534.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase"
     gene            528..788
                     /locus_tag="U1021_001845"
     CDS             528..788
                     /locus_tag="U1021_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEM4712352.1"
                     /translation="MEAIVYSHFRNHLKDYMKKVNDEFEPLVVVNKNPEEDIVVLSKS
                     EWDSLQETLAVARNTYLSQKVLRGMAKVKTGQTQERNLIEAD"
     gene            790..1047
                     /locus_tag="U1021_001846"
     CDS             790..1047
                     /locus_tag="U1021_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Txe/YoeB family addiction module toxin"
                     /protein_id="HEM4712353.1"
                     /translation="MGIHFTDDAWEDYLYWQGQDKKTLKRINKIIKDMQRHPFEGIAK
                     PEPLKYDYQGAWSRRIDAENRLIYMVEADRLCILSLKDHYR"
     gene            1061..1591
                     /locus_tag="U1021_001847"
     CDS             1061..1591
                     /locus_tag="U1021_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
                     /protein_id="HEM4712354.1"
                     /translation="MKKVVLLRGVTPVGKNKIPKMSYLAEILTEAGLTSVQTYIQSGN
                     VVCETDILDEELSRLIHQTIKEKIGAELAIIVKHQMELTQAVAENSFGEGYDPSRVHL
                     VFTNDEINGEKLNKLLHQDFGDEELRLGSQCLYMYLPRDARKKKLNTNYLEKQLDITA
                     TMRKLSVISRLSEMAK"
     gene            1575..2483
                     /gene="rsmA"
                     /locus_tag="U1021_001848"
     CDS             1575..2483
                     /gene="rsmA"
                     /locus_tag="U1021_001848"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEM4712355.1"
                     /translation="MKWRNKKQERTHMRIADKNVTRAVLERHGFTFKKSFGQNFLTDT
                     NILQKIVNTAEIDQNVNVIEIGPGIGALTEFLAENAAEVMAFEIDDRLIPILADTLGR
                     FDNVTVVNQDILKTDLQTQIQNFKNPDLPIKVVANLPYYITTPILMHLIESKIPFSEF
                     VVMMQREVADRISAEPNTKAYGSLSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKM
                     VRREQPLVSVKDEDFFFRVSKASFVHRRKTLWNNLTNHFGKSDEVKDKLTRALGMAEL
                     EASVRGEALSMADFARLSDSLQEVGL"
     gene            2846..4576
                     /locus_tag="U1021_001849"
     CDS             2846..4576
                     /locus_tag="U1021_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712356.1"
                     /translation="MLKKLLKKHPDIVAVTVFFLFSLTLLLPQILSKAVVTGDDIVFH
                     YNRFYDTAMQIKSGDFSYIMSLHGYQQSGRIVNALYGPYLAYLQGALLLLAGTWYRYQ
                     LLSNLLLGVLSATSLYFLMREVKVRYSLSVGLSMFFVTTYSVQYWWVAQGFSSWGVAL
                     FPLCLIPAVRFLKTGKVPIFLMAGAVGLMLQIHMLSALFLILAYAILFSIGWLKSQDK
                     WNVMKDVLFSVGVFLILTVNIWLPLLYVNATNELAAPFINKKFIQSTVTWSKAYFLYF
                     PYSLPIIFATFLYFMLKKWKKQSVILRGLTVTFLVFFIFSTNLFPWQLFAGKGIGLVD
                     LIQFPFRFFLYANALLLTIVGLQLTDYEVRKKLFLGLTILSTIIGVGFTWDQYNQAVN
                     DQYNKAEFLQDMLHTTLYGTTEELRASLHSKNLGEFVQLVQKSTPDYVPVLSEKEENV
                     RAVNEAKSRYDRYRDQIILPNQQFNKQVFGDSLKISWSANQSEEIQIPIVIYRDSELT
                     LNGKRLGKMDYYLSTIGVPTVTSQKGKNTLILSYKQQWWLLPVIFISLTGWILWSIYY
                     TFIYRKSNIS"
     gene            4589..7033
                     /locus_tag="U1021_001850"
     CDS             4589..7033
                     /locus_tag="U1021_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEM4712357.1"
                     /translation="MKQIKLKATKQFILVMVMTVLLAMGRALLLSDVSFPLWFIPLPL
                     IAYLIFTFYVLVLLDKYEKFIKTKTFAKYVSYFLGFLYLVNLVYRLNAKKYQPWNIFR
                     NNLFQFELLLMLALPVLLAFLWRKKTGIREKLSQWSANHLVPDGYLLLTSLLSLSPLA
                     ISYWKDSHYESLVEKGSYIEFFSQTPLFAPIHFIGTYIFLRYLHKAFVEFKANRTNVH
                     SMLFISLALATLSHIGYQASMAGGTGSYFTRHLFPGVIIFQIACLLFLNIIISLVINR
                     QILSVAVIAGLNVTLIAANFLKFRYRSEPLTPNDFKWVGNLGMILSFISLRVVLVSLV
                     FIVLLVFIYRRIHKKYFQGKIVASIWKRLAGVSVIVSLILGMGWAIRNEKDHKIAGWI
                     PILSQVNNWRNVDWKGYAFVARYRTLSFLWLQQLSKTSMEMPENYSEKTMKAIVKKYT
                     ALAEEINAERTGQLTDQTVIYILSESLADPRRIPGVTLSQNVLPNIEYIMSQTTSGLM
                     KSDHYGGGTANIEFQVYSGLPFYNYSSSISSVYLDVAPNMKKLPSISDLYPADNRIAI
                     HPYYDTSYNRNSIYKQLGIEQFYTLNSAKYPLTVTAEDYQGNFVSDKKTYDLILEQVR
                     SGTNTFVSAITMQNHVQWNSAEPASITASGESFTAEENENLNSYVRLLSFTDQATRDF
                     LDQLKTLDKKVTVVFYGDHLPGLYPESAFVTDPSAQYKTDYFVWSNFETEDYHYDLVN
                     SSDMNALMLETTNNKVSPYYALLTEVLHKDRVGQAERDAKVAEELKLVQYDLSTGKGY
                     LLKYKDFFKVATETTE"
BASE COUNT         1999 a         1382 c         1538 g         2137 t
ORIGIN      
        1 gttgaagagg agacttgaat cgtatcaagt ctctttcttg ataggttgat ttgtgataca
       61 attagtgtga aatctagtaa ataaatagtg tcagttactt gacataagag ggccatgttg
      121 agcacgggga gagtattgtc tcctctgtcg tccgcgaggt caaagaagaa acaggcttga
      181 cggtatccaa tctcgaactc tgtggcattc aaaactggac ggatccgact gaccactatc
      241 gttatctggt attttgctat aaaactagtc atttttcagg ttctattcaa tcttcagatg
      301 agggggaggt cttctggagt gaccgtgcag aattgaagaa tgttcaactg gctgacggct
      361 ttgaaaccat gctggaaatc tttgaacagc cacagctgac ggagaatttt tactggtttg
      421 aagacggcga gtggaaggtg gagaatcgct aaagagttgt acaataagtt tgacaactct
      481 ttttttctgt gctatagtaa gcctagaaat gatgagaggt attgcttatg gaagctattg
      541 tatattccca ttttcgaaat cacttaaagg actatatgaa aaaggtcaat gacgagtttg
      601 aacctttggt cgtggttaat aaaaatccag aggaagatat tgttgtactc tcaaagagtg
      661 agtgggatag tttacaagaa accctcgctg ttgctcggaa cacttatctg tctcaaaaag
      721 tcctacgtgg tatggctaaa gtcaaaacgg gacaaaccca agaacgaaac ctgatagagg
      781 cggactaaca tgggaatcca ttttacagac gacgcctggg aagactatct ttattggcag
      841 ggtcaggata agaaaacact gaagagaatc aataagatta tcaaggatat gcagcgacat
      901 ccttttgaag gcattgccaa accagaacct ttgaagtatg attatcaagg tgcctggtct
      961 cggagaattg atgcggagaa tcggttgatt tatatggtgg aagctgatcg gttgtgcatc
     1021 ctgtcgctaa aggatcatta taggtgaggg ggattaacaa atgaaaaaag tcgtcctcct
     1081 tcgaggtgtt acccctgttg gcaagaataa aattcccaag atgtcttact tggcggaaat
     1141 tttgacggaa gctggtttaa cttctgtcca aacctatatt caaagcggaa atgttgtttg
     1201 tgaaacagat atattagatg aagaactcag tcggcttatc catcaaacca ttaaagaaaa
     1261 aataggtgca gagttagcga tcattgtcaa acatcagatg gagttaacac aagcagttgc
     1321 tgaaaattct tttggtgagg gctatgatcc ttctcgtgtt catttggtct ttaccaatga
     1381 tgagataaat ggtgaaaaat taaacaaatt attgcaccaa gactttggcg atgaggagtt
     1441 gcgtctggga agtcaatgtc tatacatgta tcttccgaga gatgctcgaa agaaaaaact
     1501 aaataccaat tatttagaaa aacagctgga cattacagcg acgatgagaa aactaagtgt
     1561 tatttcacga ttgagtgaaa tggcgaaata aaaaacaaga aagaacacac atgagaatcg
     1621 cagacaaaaa cgttactcgt gccgtcctgg aacgccacgg gtttaccttt aagaaatcct
     1681 ttggtcagaa ctttttgacc gatactaata ttttacagaa gattgtgaac acggcagaga
     1741 ttgaccagaa tgtcaatgtc atcgaaatcg gtcctggaat tggagccttg actgagtttt
     1801 tggcggagaa tgccgccgag gtcatggcct ttgagattga cgaccgcctg attccgattt
     1861 tggcggacac cttgggtcgc tttgacaatg tgactgtggt caaccaagat atcctcaaga
     1921 ccgacctgca gacccagatt cagaacttca agaatccaga tctgcctatc aaggtcgtgg
     1981 ccaacctgcc ctactacatc accaccccta tcctcatgca cctgattgag agcaagattc
     2041 ccttcagcga gtttgtggtc atgatgcagc gggaggtggc cgaccgcatt tctgctgagc
     2101 caaacaccaa ggcctatggc agcctgtcca ttgcggtcca gtactacatg actgccaagg
     2161 tggctttcat cgtgcctcgc accgtctttg tgcccgctcc aaacgtggac tccgccattc
     2221 tcaaaatggt tcgccgcgag caacctctgg tgagcgtcaa agatgaagat ttcttcttcc
     2281 gagtgtccaa ggccagcttt gtgcaccgcc gtaagaccct gtggaacaac ctgaccaacc
     2341 attttggcaa gtccgacgag gtcaaggaca agctgacgcg ggcacttggc atggcagagc
     2401 tggaagccag tgtccgtgga gaagcacttt ccatggctga ctttgcacgt ttgtctgata
     2461 gccttcagga agttggttta taagcaagta ttgattgcgg agaaatctgc aatcaatctt
     2521 tattttacct aaaaccattt tcaatctatc ttgtccgttg acagtggggg gaaagcttgt
     2581 tatactggga gttgataaat tttaaggaat tattgtctgc aaatgagcag aatagtaaga
     2641 acccgtattc acagttcagc acttctactt aaggatagtt tttaagctag tcatcgttag
     2701 ttttttcaaa gtacagtcag tattctctca ataaaactgc cttgattagc gaaaaactat
     2761 ctcttattga taatcacttc acttctgagt acaggttctt acaaaaacaa gagaggggtt
     2821 ccctcttttt ttatgaaggt atcttatgtt aaaaaaatta ctgaaaaagc atccagatat
     2881 tgttgcagta actgtatttt ttcttttttc gctcaccctt ctattgccac agattttgtc
     2941 aaaagcagtg gtgacaggag acgatattgt ttttcattat aatcgttttt atgatacagc
     3001 tatgcaaatt aagtcaggag atttttctta tataatgagc ttgcatggct atcagcaatc
     3061 tggaaggatt gtcaatgctc tatatggtcc atatctagcc tatttgcaag gagccttgct
     3121 gttgttggcc ggaacttggt atcgatatca actactgtct aatcttcttt taggagtttt
     3181 gagtgccact tcgctttatt ttctaatgcg agaagtgaaa gtacgctatt ctctatctgt
     3241 tgggttatcc atgtttttcg tgactaccta ctctgttcaa tactggtggg tagctcaagg
     3301 attttcaagt tggggagtgg ccttatttcc gctttgcttg attccagcag ttcgattcct
     3361 aaaaactggt aaagttccta tttttctgat ggcaggagct gtagggttaa tgttgcagat
     3421 acacatgctg tcggctctgt ttctcatctt agcctatgca attctttttt caattggttg
     3481 gttaaaatcg caagacaaat ggaacgtaat gaaagatgta ctgttttcgg ttggagtttt
     3541 tctgatttta actgtaaata tctggttacc cttattatat gtaaatgcaa caaatgaatt
     3601 agcagcacca tttataaaca aaaagtttat tcagtcaaca gttacctggt ctaaggctta
     3661 tttcttatac tttccatact ctctaccaat catttttgca acctttcttt attttatgct
     3721 gaaaaaatgg aagaagcaat cggtgatatt gagggggctg acagtaactt ttctggtatt
     3781 ttttattttt tcaacaaatc tttttccgtg gcaactattt gctggtaaag gtattggatt
     3841 agtggattta atccaatttc cctttagatt ctttttgtat gctaatgctt tacttctgac
     3901 gattgttggt cttcaattaa cagattacga agtacgtaaa aagttgtttt tggggttgac
     3961 aatcttatct accataattg gtgttggttt tacttgggat caatataatc aagcagtcaa
     4021 tgaccagtac aacaaagcag aattcttaca agatatgctt catactactc tatacggaac
     4081 aacggaagaa ttacgtgcat ccttgcattc aaaaaattta ggtgagtttg ttcaactggt
     4141 tcagaaatca actcccgact atgtgccggt gttatctgaa aaagaagaga atgttcgtgc
     4201 ggtaaatgag gctaaatctc gttatgatcg ttaccgtgac cagattattt tacctaacca
     4261 gcaatttaat aagcaagttt ttggggatag cttaaaaata agttggtcag caaatcaatc
     4321 agaggaaatc caaataccga ttgttattta ccgagatagt gaattgacat tgaatggaaa
     4381 gaggttaggg aagatggatt attatctttc cactattggt gtgccaacgg ttaccagcca
     4441 aaaagggaag aacaccctaa tcctctccta taagcaacaa tggtggttat tgccagttat
     4501 ctttatcagt ttgactggct ggatactttg gtcgatttat tataccttta tctaccgaaa
     4561 atcaaatatt tcctaagaga gaaatgctat gaaacaaatc aaactcaagg caaccaagca
     4621 atttattctg gtcatggtaa tgaccgtctt gctggctatg gggcgagccc ttttactgag
     4681 tgatgtatct tttccactct ggtttattcc cctacccttg attgcctatc ttatttttac
     4741 attttatgta ttggtcttgc ttgataaata tgagaaattt ataaagacca aaacctttgc
     4801 caagtatgtc agctattttc taggttttct atatcttgtc aacctggtct atcggctcaa
     4861 tgccaagaag tatcaaccct ggaatatttt ccggaataat ctctttcaat ttgagcttct
     4921 attgatgttg gctcttcctg tattgttggc atttttatgg cggaagaaga cgggaattcg
     4981 agaaaaatta agccagtggt cagccaatca cttggtacca gatggctatt tgctcttgac
     5041 cagcttactc tcgctcagtc ctctagccat atcttactgg aaagatagcc attatgagag
     5101 tttggttgag aaaggttctt acatagagtt tttcagccag acaccgctgt ttgcacctat
     5161 tcattttata gggacctaca tttttcttcg ctatcttcat aaggcatttg tagagtttaa
     5221 ggccaatcga accaatgtcc acagcatgct ctttatcagt ttggcactgg ctacgctatc
     5281 gcatattggt tatcaggctt ctatggctgg gggaacgggt tcttatttca cacgtcatct
     5341 ctttccgggt gttattatct ttcaaattgc ctgcctctta ttcctaaata ttatcattag
     5401 cttggtcatc aaccgtcaaa tcctatcggt tgctgtgatt gctggtctaa atgtgacctt
     5461 gatagcggct aatttcctca aattccgcta ccgttcagag ccattaactc ccaatgattt
     5521 caaatgggtc gggaacttgg ggatgattct cagcttcatc agtctacgtg ttgtcttggt
     5581 atcgctcgtc tttatagtcc tccttgtgtt tatctaccga cgtattcaca agaagtactt
     5641 ccaaggaaag attgtcgctt ctatctggaa acggctggca ggagtttcag ttatcgtatc
     5701 cttgatttta ggaatgggtt gggcgattcg caatgaaaaa gaccataaga ttgctggctg
     5761 gattcctatt ctttctcagg tcaataactg gcggaacgta gactggaagg gttacgcctt
     5821 tgtggctcgt tatcgcacac tttcattcct ctggttgcag caactcagta agaccagtat
     5881 ggaaatgcct gagaattact ctgagaagac catgaaggct attgtgaaga agtacaccgc
     5941 cttggctgag gaaatcaatg cagagcggac aggtcaattg actgaccaga cggtaatcta
     6001 cattcttagt gagagtttgg ctgacccgcg tcggattcca ggtgtaaccc ttagtcaaaa
     6061 tgtccttcca aatattgaat acatcatgag ccagactacc agcggcttga tgaagagcga
     6121 ccactatggt ggtgggactg ccaatatcga gtttcaggtc tatagtggtc tgcccttcta
     6181 caattacagc tcatccattt cttcagtcta tctggatgtg gcgccaaata tgaagaagtt
     6241 gccaagtatc agtgacctct atccagcaga taatcgtatc gccatccatc cttactacga
     6301 taccagttac aaccgaaatt ctatctataa gcagctgggg attgagcaat tctacactct
     6361 caatagtgcc aagtatcctc ttactgtgac ggctgaggat tatcagggga attttgtcag
     6421 tgacaagaag acctatgact tgattttgga gcaggtacgt tcaggaacaa atacattcgt
     6481 ttctgccatt accatgcaaa accatgtgca gtggaactct gctgagcctg caagtattac
     6541 agcttcgggt gaaagcttca cggcggaaga aaatgaaaac ctaaatagct atgttcgttt
     6601 gctgtccttt acggatcagg caaccagaga ttttctagac cagcttaaga ccttggataa
     6661 aaaggtgacc gttgtctttt acggcgacca tctgccaggt ttgtatcctg agtcagcttt
     6721 cgtgacggac ccaagcgcgc agtataagac agattatttc gtgtggagta attttgaaac
     6781 agaagactac cattatgatt tggtcaattc tagcgacatg aatgcactga tgctggagac
     6841 gaccaacaac aaggtcagtc cttactatgc cctcttgaca gaagtgctcc ataaggaccg
     6901 agtaggacag gctgagcgag atgcgaaagt tgcagaagag ctcaaactgg tccaatatga
     6961 cctatccaca ggaaaaggct accttttgaa atacaaagat tttttcaaag tagcgactga
     7021 aacgacagaa taaaaatagg ggagtgggaa agaact
//
LOCUS       DASFQD010000113         7045 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.114, whole genome shotgun sequence.
ACCESSION   DASFQD010000113 DASFQD010000000
VERSION     DASFQD010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 7045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7045
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.114"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..174)
                     /locus_tag="U1021_001851"
     CDS             complement(<1..174)
                     /locus_tag="U1021_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4712358.1"
                     /translation="MILSKRFKNRRKELGFTQKELAEGICEQSLISRVEKLGVAPTSD
                     ILFALSQRLQVSMD"
     gene            complement(311..1249)
                     /gene="msrB"
                     /locus_tag="U1021_001852"
     CDS             complement(311..1249)
                     /gene="msrB"
                     /locus_tag="U1021_001852"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEM4712359.1"
                     /translation="MKEIYLAGGCFWGMEGYFSQIDGILDTSVGYANGQVETTNYQLL
                     KQTDHAETLYLAYDETRIHLREILLYYFRVIDPFSVNQQGPDKGRQYRTGIYYTDEAD
                     LPTIEQVMTEQASLFGGRPLAVEVEPLAHYIPAEDYHQDYLKKNPKGYCHIDLGQAKI
                     PLIDVADYQKPDQQVLKDSLTDLQYQVTQEAATERPFENEFWNSDQAGIYVDITTGEP
                     LFLSTDKFDSGCGWPSFTKPISKEVATYFQDLSHGMNRIEVRSRAGHAHLGHVFDDGP
                     RDKGGLRYCINSAALRFISREEMGEAGYGLFLDLLK"
     gene            complement(1289..2818)
                     /locus_tag="U1021_001853"
     CDS             complement(1289..2818)
                     /locus_tag="U1021_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEM4712360.1"
                     /translation="MSTISYKPLNLYRQFKTAAQEFPNVAIYFDQPYASFPELGLENT
                     YQTVFEAIQRRAAQFAAADIGYGDKVVLYKSPAFDTYLLAVAVTALGAVPVMISYHLP
                     SSNLDVFAERLEKSFIVYDQETEERVAGMTRTDLVTKVFLPQVLVQEADTFEENLLPE
                     DVIQYMTHTSGTTGVPKLICHTAQTMGWRVAWQQTIFDKMTERGLLAFHISPVHSRYN
                     IGVSSAIGLGFPLYPLSSARKDDVERALALHRPSALETHPNNFVQWARLAKEKPEVFS
                     SIRYYHSTFDAINIGTLRTFLEASKEQHPVFMQVYGQSECGPMILRYHRLENLGTVSG
                     RDMGIGLEGYTEARITDAQGNPLPAGENGHIQFLSKGRAVTYYKEDARFQENVYGAWW
                     DSGDYGCMTPEGTLLLKDRQVDLIEHIDSNLALEDLLLDKLDFLSEVVIIRDVNGAPQ
                     PIIALAEDAEMNWEAWWAMVADLPLLKEPILMAYDDIPRTATMKVQRLKMEAEMKEKN
                     L"
     gene            complement(3135..3449)
                     /gene="trxA"
                     /locus_tag="U1021_001854"
     CDS             complement(3135..3449)
                     /gene="trxA"
                     /locus_tag="U1021_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEM4712361.1"
                     /translation="MVQVITDANFEVETQEGIVLVDFWAPWCGPCRMQAPILEQLADE
                     VDEDELRIYKMDVDENPNTARQFGIMSIPTLLFKKDGQVVKQVAGVHTKDQIKTILAE
                     IG"
     gene            complement(3821..4474)
                     /locus_tag="U1021_001855"
     CDS             complement(3821..4474)
                     /locus_tag="U1021_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4712362.1"
                     /translation="MIIRKYQTSDEKGWVYCKALSYLFSPFFDDRETEKPELMTDVYD
                     YRVEWVAEVDGQIVGLIDIDIYTEECSQSYIYAPSKRTAYFTNLAVHPDFQGQGIAQV
                     LFEKAEQELREQGVEKLAIFTREDDAANHLYQKWGGEVVCSDYLVVGAPQDVPTFRFG
                     IDLERGRLSFSDMEGQPVPYYLREGVYVVSEEAGLDLFDIEDVYQELTYVVDLTEKS"
     gene            complement(4498..6831)
                     /locus_tag="U1021_001856"
     CDS             complement(4498..6831)
                     /locus_tag="U1021_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HEM4712363.1"
                     /translation="MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVQRIQ
                     QAFDELTDIAQIFVENPYFSLSATSDIGPAMRRLELDTDLNIAELLAVKKVLEVSKSL
                     LDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
                     AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTV
                     YIEPRAVVTLNEEISHLRAEERHELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRA
                     KHLFAREHQAVVPKLSEKQDIALLNVRHPLIAKPVPNDLYFGSQLTAIVITGPNTGGK
                     TIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHT
                     VQILAEADQDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYG
                     IETSGIENASMEFDTNSLRPTYKFMQGVPGRSNAFEIARRLGLSDIIIQSAQSWTDTD
                     SDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENELNKARL
                     EAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAK
                     IQREAKVGDDIIVTAYGQRGTLTNQLKDGRWEAQVGLIKMTLAKDEFELVKAEKAEQP
                     KKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFIDQALLNNLAQVDIVHGIGTG
                     VIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK"
BASE COUNT         1924 a         1643 c         1443 g         2035 t
ORIGIN      
        1 gtccatagac acctgtaagc gttgtgataa ggcaaataat atatccgatg taggagcaac
       61 tcctaatttt tcaactcgac taatcaaact ctgctcacaa attccctctg caagttcctt
      121 ttgagtaaag ccaagttcct ttcttctatt tttaaaacgt ttactaagaa tcattttcat
      181 atcctttctg tatatttaca tcttaaataa aatccctata taaatcattt tatcaaaatt
      241 atcttttcta acatactatt tcgacacaaa aagcctattc tttgcgaata gactttctgc
      301 gttcctaaat ttatttaagc aaatctaaaa acaggccata tcctgcttct cccatctctt
      361 ctcttgatat aaaacgaagg gctgcagagt tgatacagta acgtaatcca cccttgtcac
      421 gcggtccatc atcaaagaca tggcccagat gagcatgtcc agcccgactg cggacttcaa
      481 tacggttcat gccgtgggaa agatcttgga aataagtcgc aacttccttg ctgattggct
      541 tggtaaagga gggccagccg catcctgagt cgaatttgtc tgttgagaga aagaggggct
      601 cgccagtcgt aatatcgacg tagataccag cttggtcgct attccaaaac tcattttcga
      661 agggtctttc cgtcgctgcc tcctgagtga cttgatactg gaggtcggtc aagctgtctt
      721 ttaagacttg ttggtctggc ttttggtagt ctgcaacatc aatcagaggg atttttgcct
      781 gcccaagatc gatatggcag taccctttgg gatttttctt gagataatcc tgatggtagt
      841 cttcggcggg gatgtaatgc gcgagtggct ccacttcaac ggctaggggg cgtccgccaa
      901 agaggctagc ctgctccgtc atgacctgct cgatggtcgg caaatcagcc tcatctgtgt
      961 aatagatacc agtccgatac tggcgcccct tgtcaggtcc ctgctgattg acagagaagg
     1021 gatcaatgac gcggaaatag tagaggagaa tttcccgcaa atggatacga gtctcatcat
     1081 aggctagata gagtgtttct gcgtgatctg tttgtttgag gagttgataa ttggtcgtct
     1141 ccacctgtcc attggcatag ccaacgctgg tgtcaagaat accatcaatc tgggaaaagt
     1201 agccttccat tccccagaaa caaccgcctg ctagataaat ttctttcatg tgaactcctt
     1261 cttatctgca agcgtggttt cgtcaccctt acagattttt ttctttcatt tctgcttcca
     1321 ttttgaggcg ttgaaccttc atggtcgcag tacgtggaat gtcgtcataa gccatcaaga
     1381 tgggttcttt caatagtggt agatctgcaa ccattgccca ccaagcttcc cagttcatct
     1441 cagcatcttc tgccagagca ataatcggct gcggtgcacc attgacatcg cggataatca
     1501 cgacttctga taaaaagtcc aatttatcca gcaataaatc ttccaaagct agattgctgt
     1561 cgatgtgctc aatgaggtca acctgacggt cttttagaag cagtgtaccc tctggagtca
     1621 tgcatccgta gtcaccacta tcccaccaag caccgtacac attttcttgg aaacgggcat
     1681 cttctttgta gtaggtcacc gcacggcctt ttgacagaaa ctggatatgt ccgttttctc
     1741 cagctgggag aggattccct tgggcatctg tgatgcgtgc ttctgtgtaa ccttccagac
     1801 caatccccat atctcgtccg ctaactgttc ctagattttc caaacgatgg taacgtaaaa
     1861 tcattggacc acattcactt tgaccataaa cctgcataaa gactggatgt tgctctttag
     1921 aagcctccaa gaaggtgcga agcgtaccaa tattgatggc atcaaaggtg gaatggtaat
     1981 aacgaatgct actaaagacc tctggttttt ccttggccaa tcttgcccat tggacaaagt
     2041 tgttaggatg ggtttccaga gcacttggac ggtgaagagc aagcgcccgt tcaacatcat
     2101 cttttcttgc agaagaaagc gggtagaggg ggaatcctag tccaatcgcc gacgacacgc
     2161 cgatattata gcgtgaatga acaggtgaga tatggaaggc cagcaagcct ctctccgtca
     2221 tcttgtcaaa aatagtctgt tgccaagcta ctcgccagcc catggtctgt gctgtgtggc
     2281 agattagttt tggaacacct gtcgttcctg aagtatgggt catgtactga atgacatctt
     2341 ctggcaggag attttcttca aatgtatctg cttcttgcac taggacttgg ggtaaaaata
     2401 cctttgtgac caggtcagtt cgggtcattc ctgctacacg ttcttccgtt tcctggtcgt
     2461 agacaatgaa agacttttcc aatcgctccg caaacacatc taaattcgaa gatggcaaat
     2521 ggtaggaaat cataacagga acagcaccca atgccgttac cgctactgct aacaaatagg
     2581 tgtcaaaagc tgggctctta tacagaacca ccttgtcccc atagccaata tctgctgctg
     2641 caaattgggc agctcttctt tgaatggcct caaaaactgt ttgataggta ttttccaatc
     2701 ctaattcagg gaaggaggcg tagggttggt caaaataaat ggcaacattt ggaaactctt
     2761 gagctgctgt tttaaactga cgataaagat ttaatggttt gtaactaata gttgacatat
     2821 ctaacctttc taaaatgaca atgataaggt tattataaca tcttgtgcca accttcacaa
     2881 tcttatatct tagcaaatat cgtcatttag tttttctttt attgcttcga caatcgagga
     2941 aatatcgttt ccatatttcc aacttcaaac actccactgg tgtgtttgaa ctcgccttgc
     3001 atcagttatg cctgcggctg tcgacgcaaa ctttgttcgc ttagtactaa aagactatat
     3061 tagaaaataa tcacaaaagt aagtctgatt ataaaaaaac aagtagtcaa tccaccactt
     3121 gctttcattt tcaattaacc aatctctgcc aatatagttt tgatttgatc tttcgtgtgg
     3181 acaccagcaa cttgtttcac aacctgtcca tcttttttga acaaaagagt tgggatagac
     3241 atgattccaa actgacgagc tgtgtttgga ttttcatcaa catccatctt gtaaatacgc
     3301 aattcatctt cgtccacttc atctgccaat tgctccaaaa ttggtgcttg catacgacaa
     3361 ggaccacacc atggtgccca aaagtcaaca aggactatgc cttcttgtgt ttcaacttca
     3421 aagtttgcat ctgtaataac ttgaaccata attttctccg tttctgtttt tctactatca
     3481 ttctacacca aaaaaaaaca gaaagcgaat ttttgctacg gaagagaaat gagttaaacc
     3541 tatctataaa aatttcagtt gtaaaaacaa atgggtaaag ccaaacttgt ccacaacgat
     3601 acaagcgaga aatgaaaaat tgttttgctt atcaaatcca attgtaacaa tgagacaagg
     3661 tgacggagta ggtgctacgg gaaaaagagg ggagatagat gtgtcgagaa aatagtgact
     3721 tggaaaaacg tattggtcaa gccaaactag accgcaggga aacgaggggg aactcacgta
     3781 cctgatttat ttacaaaaag agaaaaaagt tgaaaatgtt tcaacttttt tctgttaaat
     3841 ccaccacata ggttaattct tgatagacat cttctatgtc aaagagatcc aagccagctt
     3901 cttcactgac tacataaaca ccttctctca aatagtaggg aactggctga ccttccatat
     3961 ctgaaaagga caatctacct cgctctaaat caattccaaa gcggaaggtt ggaacatctt
     4021 gtggcgctcc gaccactaga taatccgaac agactacctc accaccccat ttctgatata
     4081 aatggttggc tgcgtcatcc tcacgagtaa agatggctaa tttctctaca ccttgctctc
     4141 tcaactcctg ctctgctttt tcaaaaagca cctgggcaat gccctgccct tgaaaatcag
     4201 ggtgaactgc taggttagta aaataagctg ttcgcttact tggtgcgtaa atataagact
     4261 ggctgcactc ttccgtgtaa atatcgatgt caattagacc aacgatttgc ccgtccactt
     4321 cagccaccca ttccacacga taatcataaa cgtctgtcat tagttcgggt ttctctgttt
     4381 ctctatcatc aaagaatgga gagaagagat agctgagtgc cttacagtaa acccagcctt
     4441 tttcatcact ggtttgatat tttctgataa tcataagaat ctcccatcgg ttgattacta
     4501 tttaaacgtc acaatagtac agcctgatcc acctgcattt tgtggggcat agccgaactc
     4561 cttgacctgc ttgtttcggc gtaggtactt ggtcacccct tctcggatga cacctgtacc
     4621 tataccgtgg acaatatcga cttgggctag gttattgaga agggcctgat cgataaattc
     4681 atccagctcc atcatagcct cttcgtagcg tttgccacgg agatctaagc gggcttttgg
     4741 tcctcgtaca ttggcacgtt tgactgtgtg aacctggcgt ttcttaggct gctctgcctt
     4801 ctccgccttg actaactcaa actcatcttt ggccaaggtc atcttaatca agccaacctg
     4861 agcttcccaa cgcccgtcct tgagctgatt ggtcaaggtc ccgcgttgtc cataagctgt
     4921 aacgataatg tcatcgccca ccttggcttc cctctgaatt ttagctttct tcagaacctt
     4981 gtttttagac agatccacca cttcaggcgc caactttttc agctctgcct tggcttcgat
     5041 aatctggtgg ggcttaagac tagctgcagc atggagattt ttgagaatat cctcgctttc
     5101 tgccaatgcc atatctacaa tttccttggc ttccaagcgt gccttgttga gctcattttc
     5161 cctctcacga ttgagctcgt catagagctt gcggagggct cggttcatct tgtaattttc
     5221 ttgctccaca tcacgaatct tatccagacg ctgacgactt tcaaccgtct gactttccaa
     5281 tttctcgata atgcggttca catcgctatc tgtatccgtc caagattggg ctgactggat
     5341 aataatatca gatagaccaa gacggcgagc aatttcaaag gcattggagc gaccaggaac
     5401 accctgcata aacttatagg tcggacgcag gctattggta tcaaactcca tgctggcatt
     5461 ttcaatacca gaggtttcta tcccgtaggc cttaagctca gggtagtggg tggtcgccat
     5521 ggtcttgatc ccccgcagac gaaggtcatc caaaatagcc attgccaagg acgcaccctc
     5581 ctgcggatct gtcccagctc ccaactcatc aaatagaatg agggaatctt gatccgcctc
     5641 cgccaaaatc tgtaccgtgt gggtcatgtg actggagaag gtcgataaac tctgctcgat
     5701 ggactgttcg tctccaatgt ccgcaaaaat ttctttgaag atagctaccc gactgccctt
     5761 gtcagccaag ataggcaaac cagactgggc catcagatgg gtcaatccca aggtcttaag
     5821 catgatggtc ttaccacctg tgttgggacc tgttatcacg atagccgtca actgactacc
     5881 gaaataaagg tcatttggta caggcttagc aatgagcgga tgtcgaacgt tgagaagagc
     5941 aatatcctgc ttctcagata gtttgggtac aactgcttga tgttcacgtg caaagagatg
     6001 cttagcacgg acgaaatcaa tatgcccgat aagccaggca ttgttacgga tcacaccact
     6061 atgcggacgg agcatatccg ataattcctg caggatacgg ttgagctcat ggcgttcttc
     6121 tgcacgtagg tgactgattt cttcgttcaa ggtcaccact gcccgcggct caatataaac
     6181 cgtcgagcca gaagcggaga tatcatggac tacacccgca atcttattgc gataggtatt
     6241 tttaacagga aggacattgc gtccattacg gcttgccaaa atactatcgg acagcatgtc
     6301 gcccttggtc ttcaaaatat cctgcatgac ctgacgaact tgatcttcag cttcacggat
     6361 ttttcttcta atacgagcca gcttttctga ggcaaaatcc tctacaaaac cagcatcatt
     6421 gatggactgg agggagccct gtaaatgtgg aaaaagctca atcttctcaa agagtttatc
     6481 cagctggcta agactgacat tttccagatt tccataaaaa tccaagagag atttagaaac
     6541 ttccaagacc tttttaacag ctaataattc agcgatattg aggtctgtat ccaattccaa
     6601 acgacgcatg gctggaccaa tgtcactagt agctgacaga ctgaaatagg gattttccac
     6661 aaaaatctgc gctatgtctg tcaactcgtc gaaggcctgt tggatacgtt ggacttccac
     6721 catgggctcc aactgtcgta attcttcaaa gccctgttcc gtcaagagat agggctcaat
     6781 tttttgtctt accttgtgaa attcaagggt ttcaataatt ttattattca tatgttccta
     6841 cttagtcttt tccttagctt tatctcatta tcaaaacaat aaaagataaa aatatagtct
     6901 ttcccaatct cttacattaa agttataaca gtcaactaat actcaatgaa aatcagaatc
     6961 agacttgctc caaaggttcg gggaaccttt agagctatgc gggggtggga gtttaaaagg
     7021 tctgggagac cttttaaagt gggag
//
LOCUS       DASFQD010000114         6819 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.115, whole genome shotgun sequence.
ACCESSION   DASFQD010000114 DASFQD010000000
VERSION     DASFQD010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6819)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6819)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6819
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.115"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            23..688
                     /locus_tag="U1021_001857"
     CDS             23..688
                     /locus_tag="U1021_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM4712364.1"
                     /translation="MKTFCQGMKWLGRKLWVLLRAFGLLLIAVLPDAILEVSTSQLAQ
                     WGAALVSFVIIVFMYWRAEKNGIKIWDRSFLTWKGLGLVVLTFAVAQLFKHLGYYIME
                     LQGIEETSNELELTKLLENIPFWLAFVRIACQAAISEEIIVRGYLFKKLFEKYKILGI
                     VVSGLIFAFLHGPTDLGSWIIYASPGFLLAYLYYKTDYLIYPIAVHFINNAWSVLAFY
                     YFQ"
     gene            complement(769..1695)
                     /locus_tag="U1021_001858"
     CDS             complement(769..1695)
                     /locus_tag="U1021_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4712365.1"
                     /translation="MNLSKEKQLFHHYYANWLRIYKEGAIREVTLKKYRMTLQWLIRL
                     APSLLLEDLNRVRYQELINSYAKTHERQTTMDFHHQLKGAILDAVDEGIIERDPTRKV
                     IIKGRLPRKKKTKYLNQFELHQLIQELRLGEELNWDWLILLIAKTGIRFSEALALTTQ
                     DFDFHRQLLTIDKTWNYKGDGGFLPTKNKSSIRKIQLDWQTSTQFANLLQHTQPDDLL
                     FVKKERIYNSTINAILEKRCLSANLPVITIHALRHTHASILLFAGVSIASVARRLGHA
                     SITTTQKTYLHIIRELENQDVDLIMRSLSGLC"
     gene            1789..2391
                     /locus_tag="U1021_001859"
     CDS             1789..2391
                     /locus_tag="U1021_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEM4712366.1"
                     /translation="MKNFKERKIMKLEELAHFTGGSLQVRLDTTSWEDARDYILYNQQ
                     HHQLDGYEVIEEVIDSRTVTTDREVTLLEEGDLLFSLLSGKAVLVRAEHAGLLYTQNY
                     IKIEPIAKLDKVFLLYLINESSAIRRQFYQSLQGSEVMKYTVKQLKSLQLGALPPLDS
                     QQKLGKIYLDGLVLRQKRQAYAQGDFLRLTYLLKEVYAHE"
     gene            2384..5590
                     /locus_tag="U1021_001860"
     CDS             2384..5590
                     /locus_tag="U1021_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEM4712367.1"
                     /translation="MNELAFETELIQYITTGTITQPEHLEGLEWSVSDSSTLYAVKSK
                     LWTYEPSIKTTEQLWENFRNILWQHNQHRLDKPLSDTEFAQVKQIISDLKTPYEAGQF
                     LYGISGVSELEITLDDGRHTFLTVFDQRKIGGGDTVYQVVNQIRRAPKIPGRRECIFD
                     TTLLINGLPIIQIEEKKDTIDVDKALNQMHQYIQERQYTDIFSTLQILVAIAPNNVRY
                     MANTTAEKFNKDFAFHWQRKSDGSKVRNWKEFADSMLSIPMAHQMTTNYMILDGTPQK
                     QMLKVMRPYQVYATQAVIEGIKKVDFELGCNKVGYIWHTTGSGKTITSFKTAWLASRM
                     PKVDKVVFLVDRIALTNQTKDDYLAYDPEAGENSFGSIRETQNTTALARQLTSKDSGI
                     IVTSVQKLDTLVKRKSFKSPDKHIVFIVDEAHRSTGGDSFAGIQKAFKKAAWIGYTGT
                     PNLDDTGASLRTQDIFGPLLHAYTIKNAISDRNVLGFKVDFETTIDQEKLKTTYLPDF
                     YRQKYPKWTSAQIEEKIANLSPDDMDDAVTSSIYDENPEHVRLVVEDVFKHWANRSGS
                     GRYNALFTTHVGGGRASTPMAMMYFREFQRINQLHREQGGLVLKVGVTFALNTQNNDS
                     MVESNTGLLEAITIYNTEFGTSFGLSDVASYTEDLVSRLNRTAKDKNYLDLVIVVDQL
                     LTGFNAPELNTLYVDRTLKGASLIQAYSRTNRVEDMDKKPFGRVVNYRWPAHNEKLMN
                     QALAIYADDSAANLSEAEQKNNNEKNGLVAKPFKEVFAEVKQTVDQLRELTGDFNDIP
                     KSEKKREAMLELLRAYNQGLSKLKQYQPEEVDGVIEGFDYNQPDRFIESLGMSVEEEK
                     LLTTVLANELKRTLAKEQKVSIHQIELKMTHIKEVTIDYDKLTELVELLLNQVHEEKM
                     VEAAATRDELDRFASGLEDLNYADQIRQTGDAIYRGDFPTQDMNFAYPVKGIDSQKII
                     QEASHVYIDKKLFAFRIQWGLTEHIRNQELRELLARHRYGQNDLDDTGHLRTLIKEAS
                     RDYQTWAEDDAVKGLSKIQYRNQLRQALYDLADDLVGQ"
     gene            5698..6576
                     /locus_tag="U1021_001861"
                     /pseudo
     CDS             5698..6576
                     /locus_tag="U1021_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027693.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
BASE COUNT         2087 a         1204 c         1552 g         1976 t
ORIGIN      
        1 tgtatcagaa taggggattg atatgaaaac attttgtcaa gggatgaaat ggcttggtcg
       61 aaaactttgg gtattactga gagcgtttgg tttgttatta attgctgttc ttccagatgc
      121 tattttagag gtatctactt ctcaattagc ccagtgggga gcagccttag tatccttcgt
      181 gattattgtc tttatgtact ggagagctga gaagaatggt atcaagattt gggatagaag
      241 ttttttaact tggaaaggtc ttggtttagt tgtcttaaca ttcgcggtag ctcagctgtt
      301 taaacacctt ggctattaca ttatggaact tcaggggatt gaagaaacca gcaatgagct
      361 tgaattgaca aagttattag aaaacattcc attttggtta gcctttgtta gaattgcctg
      421 tcaggcagcg atttcagagg agatcattgt cagaggctat ctattcaaaa agctatttga
      481 aaagtacaag attctaggaa ttgtagtatc tggtttgatt tttgctttcc tgcatggacc
      541 aacagatttg ggttcatgga ttatttatgc tagcccaggt ttcttgctgg cttacctcta
      601 ctataaaaca gattatctga tttacccaat agcagttcat tttatcaata atgcctggtc
      661 ggtgctggct ttctactatt ttcaataagc ataaagaaaa gacgattccg tttggagtcg
      721 tcttttgcta ttgtcagtac aagccttgtc acgatagaga taggaatgtc aacaaagtcc
      781 tgatagtgac cgcataatta aatcaacatc ttggttttcc aactcacgaa tgatatgaag
      841 ataggttttt tgggtcgttg ttatgcttgc atgaccaagt cgtctagcaa cacttgcgat
      901 agaaaccccg gcaaataata aaatagatgc atgggtgtgt cgcagggcgt gaatggtgat
      961 gacaggaaga tttgcactta ggcaacgctt ttcaagaatg gcattgatgg tagagttgta
     1021 aatccgctct ttcttcacga aaagtaggtc atcgggttgg gtgtgctgca ataagttggc
     1081 gaattgggtg ctggtttgcc agtcgagttg gatttttcga attgaagatt tattttttgt
     1141 aggtaaaaat ccgccgtctc ctttataatt ccatgtttta tcaatggtca atagctgtct
     1201 gtgaaaatca aaatcttgag tagtgagagc aagggcttct gagaatcgaa tacctgtttt
     1261 agcaattaat aagatgagcc aatcccaatt cagctcctct ccgagacgta attcttgtat
     1321 caactgatga agctcaaatt ggttgaggta ttttgtcttt ttctttcgag gaagtcttcc
     1381 tttgataatc accttacgtg tcgggtctcg ttcaataatt ccttcatcta cagcatctaa
     1441 aatagctcct ttcaactggt gatgaaaatc catggttgtc tgtcgttcat gtgttttagc
     1501 atagctgtta atcaattctt ggtaacgaac ccgattcaaa tcttccaaca acagactagg
     1561 agctagtctg ataagccact gcaatgtcat tctatatttc ttgagagtga cttctcgaat
     1621 ggctccttcc ttgtaaatcc gtagccaatt tgcataatag tgatggaaaa gctgtttttc
     1681 ttttgataag ttcatggcag aacctccttt ttaattttta aaaattacat aatttattga
     1741 cagatttccg aggagatgct atacttattt tagcgaaaaa atgtaattat gaaaaatttc
     1801 aaagaaagga aaattatgaa actagaagaa ttggctcact ttacgggagg tagtttacag
     1861 gttcgcttgg atactaccag ctgggaagat gctagagact atatcctcta caatcagcaa
     1921 catcatcaat tggatggtta tgaggtgata gaagaagtga tagatagtcg gaccgtgacg
     1981 acagatagag aagtgacctt gctcgaggag ggagacttac tctttagttt actatcgggg
     2041 aaggctgttt tagtgagagc ggagcacgca ggcttactct atacacagaa ctatatcaaa
     2101 attgagccca ttgcaaagct ggataaggtc ttcttgctgt atctgatcaa tgaatcctcg
     2161 gctattagac ggcagtttta ccaaagctta caggggagtg aggtaatgaa atatacagtc
     2221 aagcaactga aaagtttaca gctaggcgcc ttgcctcctt tagatagtca gcagaaacta
     2281 ggaaagattt atttagatgg attagtctta cggcagaagc ggcaagctta tgcgcaagga
     2341 gattttttac ggctaacata tttgttaaag gaggtttacg cacatgaatg aattagcatt
     2401 tgaaacagaa ttgattcaat atattacgac agggactatt acacagccgg agcacctaga
     2461 aggtctagaa tggtctgtta gtgattcttc gaccctgtat gcagtcaaat ctaaactgtg
     2521 gacttatgag ccgagtatca agacaacgga gcaattatgg gaaaattttc gtaatattct
     2581 ctggcaacac aaccaacatc gattggacaa acccttgagc gataccgagt ttgctcaggt
     2641 caagcagatt atttcagatc tgaaaacacc ttatgaggct ggtcagtttt tatatgggat
     2701 tagcggtgtt tccgaattgg aaattacact tgatgatgga cggcatacat ttttgacagt
     2761 attcgaccaa cgtaagatag gcggtgggga cactgtctac caagtggtga accaaattcg
     2821 tagggctcct aaaatccctg gacgacgaga atgtatattt gatacaacct tgttgattaa
     2881 tggcttacct attattcaga ttgaagagaa aaaggatacg atagatgtag acaaggcatt
     2941 gaaccaaatg catcaatata tccaggaacg gcaatatacg gatatttttt ctaccttgca
     3001 gattctagtc gctatcgccc ccaacaatgt tcgctatatg gccaatacca ctgcggagaa
     3061 atttaataag gactttgctt tccactggca gcgtaaatct gacggtagta aggttcggaa
     3121 ttggaaagaa tttgcggatt ccatgctcag cattcctatg gcccatcaga tgacgaccaa
     3181 ctacatgatc ttagacggga caccgcagaa acaaatgctg aaagtcatgc gtccctatca
     3241 agtttacgcc actcaggcgg tcattgaggg gataaaaaaa gtcgattttg aattaggctg
     3301 taacaaggtt ggttacatct ggcatacgac aggctcaggg aagacgatca ctagttttaa
     3361 aacagcttgg ctggcaagtc gaatgcccaa ggtagacaag gttgtctttc tagtggatcg
     3421 tatcgctttg accaatcaga ctaaggatga ttatctggct tatgatccag aagctgggga
     3481 gaatagtttt ggcagtattc gagaaactca aaataccaca gccttggcac ggcagttgac
     3541 tagtaaggat agtgggatta tcgttacttc tgtgcaaaaa ttagatacac tggtgaagag
     3601 aaaatccttc aaatcaccag ataagcatat cgtgtttatc gttgacgaag ctcaccgctc
     3661 aactggtgga gatagttttg cagggattca aaaggccttt aagaaagcgg cttggattgg
     3721 ctatacagga actcccaact tagatgatac aggtgctagt ctacggacgc aagatatttt
     3781 tggccctctt cttcatgcct acactattaa aaatgccatt agtgatcgca atgtactagg
     3841 gtttaaggtg gattttgaga caaccatcga tcaggaaaaa ctaaaaacaa cttacttgcc
     3901 agatttttat cggcaaaaat acccgaagtg gacaagtgca cagattgaag aaaagattgc
     3961 caatctaagt ccagatgata tggatgatgc ggtgacttct agcatctatg atgaaaatcc
     4021 agagcatgtt cgactggtag tcgaagatgt cttcaaacac tgggcaaatc gctccggcag
     4081 tggccgttac aatgccttat tcaccaccca cgtaggtgga ggcagggcct ccacacccat
     4141 ggctatgatg tatttccgag agtttcaacg aatcaatcaa ctgcatcgag agcaaggagg
     4201 tctggtcttg aaggtgggag tgacctttgc cttgaatact caaaataatg atagcatggt
     4261 cgagtcaaat actggtttgc ttgaagctat tacgatctat aacacagaat ttgggacgtc
     4321 ctttggcttg tcagatgttg cttcttatac agaggacctg gttagtcgcc ttaatagaac
     4381 agccaaggac aagaactact tagatttggt gattgtcgtg gatcagttgt tgacaggttt
     4441 caatgctcct gagctcaata ctctttatgt tgaccgaacc cttaaaggag ccagtcttat
     4501 ccaggcctat tctcgtacca atcgtgtgga ggatatggat aaaaaacctt ttggacgggt
     4561 ggtcaattac cgctggccag ctcataatga gaaattgatg aatcaggcct tggccatcta
     4621 tgcagatgat agtgctgcca atttatcaga agcggaacaa aaaaataaca atgaaaaaaa
     4681 tggactggtg gctaagcctt tcaaggaagt atttgcggaa gtcaaacaaa cggtcgacca
     4741 attgagagag ttgacgggtg attttaatga tattccgaag tctgagaaaa agcgtgaggc
     4801 tatgttagaa ttgctccgtg cttacaatca aggattgtct aagctgaaac agtatcagcc
     4861 agaggaggtt gatggggtga ttgaaggatt tgattacaat cagccggacc gctttattga
     4921 aagtttggga atgtctgtag aggaagaaaa acttttgacg acagtcttag ccaacgaatt
     4981 gaaacgaacc ttggcgaaag aacaaaaagt tagcattcac caaattgaac tcaagatgac
     5041 tcacatcaag gaagtgacaa ttgactacga taaattgacc gaactggttg agctcttgct
     5101 gaatcaggtt cacgaagaga agatggtaga agccgcagct accagggatg aattggatag
     5161 atttgcaagc ggtttggaag acctcaacta tgctgaccag atccgtcaaa caggggatgc
     5221 aatctatcga ggtgattttc cgacacaaga tatgaacttt gcttatccag tcaaggggat
     5281 tgatagtcag aagattatcc aagaagcctc gcatgtttat attgacaaga agctctttgc
     5341 tttccgaatc caatggggct tgacggaaca tatccgcaac caagaactac gagagttgtt
     5401 ggcgagacat cgatatggtc agaatgactt ggatgatacc ggacacttac gtaccttgat
     5461 aaaagaagct agtcgcgatt accagacctg ggcagaagat gatgctgtta aaggcttgag
     5521 taagattcag taccgcaatc agttgagaca agcactatat gatttggccg acgacttggt
     5581 tggtcaatag gttgcgattt tgttggatga tagcgtataa tagaatggaa atcgtccgaa
     5641 aaattgcaaa aataactttc aaaaataaaa caaaaagaaa gtagaaaagg agggactatg
     5701 acaaaagaaa aatcaaccgt accacgattg cgcttccccg gattcacgta cgcttggaaa
     5761 cagcgtaagt tgggggaggt ggcggacttt tccataaaaa caaactcact ttctagagat
     5821 aagttatcat cgtattatta tgaagttcag aacattcatt atggggatat tttaacaaaa
     5881 tatgacgcta ttttagatgt atgtaacaaa gaacttccat caattattgg aagtacgatt
     5941 tcagactttg cagatgcttt acttattgaa ggagatattg ttttcgcgga tgcggcagaa
     6001 gactcgactg ttgggaaagc tgttgaagtt cgaaatttta agggtaaaaa tgttgtttct
     6061 ggtttacata cgatagttgc taggccgaaa gttccttatg ccccctacta tttaggttat
     6121 ctaattaatt caactgcata ccataatcaa attttacctt taatgcaggg gacaaaagtg
     6181 agctcaatta gtaaggctaa tttaaaatcc acgacagtag tgttccccac cctccccgag
     6241 caagaagcta tcggcagctt cttctccgat ctagatcagc ttattactct tcatcagcga
     6301 aaattagatg atgttaaaga attgaagaag gctttgttac agaaaatgtt tccgaaaggg
     6361 aatggaaacg attttcctga gctaagattc ccagaattta cggacgcttg gaaacagcgt
     6421 aagttggggg aagttgcgga aaaaattagt caaaaaaatc tagatagaca gtatgtagaa
     6481 acttttacaa attctgctga attcggtatc atttctcaga gggatttctt tgaaaaaaat
     6541 atctctagtt tggataatat aagtggatac tatattgtga gtcctgatga ttttgtatat
     6601 aatccaagga tttcaaattt agctccagtt ggtccaataa agcggaataa attgggaaga
     6661 gtgggggtta tgtcgcctct ttatactata tttagatttt cagatataca tttggatttt
     6721 gtagagaagt attttgacac aacaatttgg catagatata tggagctgaa tggggatagt
     6781 ggagctcgct cagatagatt tgccattaaa gattcagtt
//
LOCUS       DASFQD010000115         6744 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.116, whole genome shotgun sequence.
ACCESSION   DASFQD010000115 DASFQD010000000
VERSION     DASFQD010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6744
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.116"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(18..812)
                     /locus_tag="U1021_001862"
     CDS             complement(18..812)
                     /locus_tag="U1021_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HEM4712368.1"
                     /translation="MDKLILGRYIPGDSIIHRLDPRSKLLAMFGFLLMIFWANNLVTN
                     ALLIAFVLGMVVLSRIRLSFFINGLKPMIGIILFTTFFQVFFTPGATILWEFWIFKLS
                     VEGLQQAAIIFVRFVLIIFFSTLLTLTTTPLSLADGIESGLAPLKKFKVPVHEIGLML
                     SMSLRFVPTLMDDTTRIMNAQRARGVDFNEGNLIQKVKSVIPILIPLFASSFKRADAL
                     ATAMEARGYQGGDGRTKYRILEWKLADTLAILVMLALAGLLFILKK"
     gene            complement(805..1647)
                     /locus_tag="U1021_001863"
     CDS             complement(805..1647)
                     /locus_tag="U1021_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter ATPase"
                     /protein_id="HEM4712369.1"
                     /translation="MGIDLQEVSYTYQAGTPFEGRALFGVDLEIVDGSYTALIGHTGS
                     GKSTILQLLNGLNVPTEGRVVIDDVVITATSENKDIKQVRKKVGLVFQFPESQVFDET
                     VLKDVAFGPQNFGVSQEEAETIAREKLALVGIDESLFERSPFELSGGQMRRVAIAGIL
                     AMEPSILVLDEPTAGLDPAGRQELMDIFKKLHESGMTIVLVTHLMDDVANYADFVYIM
                     EKGKLVRSGKPVDIFQEVDFLESIQLGVPKITKFAANLERRGFVFERLPITIEEFTGM
                     VTHG"
     gene            complement(1623..2459)
                     /locus_tag="U1021_001864"
     CDS             complement(1623..2459)
                     /locus_tag="U1021_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter ATPase"
                     /protein_id="HEM4712370.1"
                     /translation="MMNIIEVKNLKYKYNQEDEQYTLNDVSFHVKQGEWLSIIGHNGS
                     GKSTTVRLIDGLLEAESGDIYIDGDALTIDNVWDKRRLIGMVFQNPDNQFVGATVEDD
                     VAFGLENQGIPLEEMRSRVDEALELVGMTDFKTREPARLSGGQKQRVAIAGVVALRPK
                     IIILDEATSMLDPEGRLDLIKIVREIKERHGMTVISITHDLDEVALSDRVIVMKNGQV
                     ESISTPNELFMREDLVDLDLDRPFTTELASSLRQTGLDLPLRYFTEEELEETLWELIS
                     KK"
     gene            complement(2456..2995)
                     /gene="pgsA"
                     /locus_tag="U1021_001865"
     CDS             complement(2456..2995)
                     /gene="pgsA"
                     /locus_tag="U1021_001865"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEM4712371.1"
                     /translation="MKKENIPNALTIGRILVIPIFILLLTVWDSTISHVLAALIFALA
                     SITDYLDGYLARKWQVVTNFGKFADPMADKILVMTAFIMLVELGFAPAWVVAIIICRE
                     LAVTGLRLLLVENGGTVLAAAMPGKIKTFSQMFAVIFLLLHWNVVGQITLYIALFFTL
                     YSGYDYFKGASFLFKDTFK"
     gene            complement(3005..3862)
                     /locus_tag="U1021_001866"
     CDS             complement(3005..3862)
                     /locus_tag="U1021_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4712372.1"
                     /translation="MRQKSIGEVLRTAREGRGWTFVDLQRITKIQAKYLQALEYNDFD
                     FIANSDDVQSILKAYAEALELDADVLLDAYETNSLVKYYEDGEEELRSSELKRSYKVR
                     KRKKNSYLPLIYLLLATGLIIIFVTYIVYSRLQNRASITPTTTSYSIVEQSVSEASSG
                     TETSSTEQAQSNSTSSSSSAIENVTISGTGSNIVATLKTVTYPVEVTVTAKNTTSWIS
                     LSDTLLEGGVTLTPDNPTVTTTIEEGVTSTTLVLGVVKGVEVSVGGQKLDLSALTADT
                     GSITINFEQ"
     gene            complement(3944..5227)
                     /locus_tag="U1021_001867"
     CDS             complement(3944..5227)
                     /locus_tag="U1021_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEM4712373.1"
                     /translation="MKLVEKKYPYMKESVFYGKVDNGLTVILLPKVDFHETYGILTTN
                     FGGIHTRFTLANGKSVVYPAGIAHFLEHKLFETENEEDIMNEFAKLGASANAYTSFRQ
                     TSYLFSTTQKVLESLSLLQSFVREPYFTEDNVEREQGIIEQEIEMYQDDADYRLFTGI
                     LSSLYPESPLAYDIAGTVESIAAITADDLHENFDVFYHPSNMNLFVIGNFDLEAVWKQ
                     ISSYQVAQMDNPAQSFELAGIQKLPIQEHLSEQFEVSTPKLAVGLRGNDEVDKETIQK
                     YRLSLQFLFAMLFGWTSKRYQQLYEQGKIDSSFQFQLEVTPEYHYLIISGDTQEPITL
                     SSILMKALRKFEDDADVTEDHLQLLKNEMYGDFIRSLNSLEFTASHFVSQYSEYENVF
                     DIPQMIQSLQLDDIREAGRRFIDHCDMTDFTIFPK"
     gene            complement(5224..6477)
                     /locus_tag="U1021_001868"
     CDS             complement(5224..6477)
                     /locus_tag="U1021_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEM4712374.1"
                     /translation="MKLQEGVDLHFIDTDQFTTNRIRIRFAAEMSEATVAGRVLVANI
                     FEMGNQEFQTAQAVRRRLAELYGAQFSTSVSKRGRVHCVDVTISYVSPRHLPENEDIT
                     VEILDFLYTCIFRPLKKGRGFDSQIFEVEKTNLINFLQSEIEDNFYHADVEMSKLFYK
                     DPSLQIPRVGRLDLVEKETAESTFQIYRNMLRMDKIDIFVLGKVDREQVKRKLEDFGF
                     TYRNPKLELEYNQEYSNITQEKIERKQARQSILELAYHLQVVYNDVNYPALMVFNGLL
                     GAFSHSKLFMNVREKESLAYTIGSQVSIFSGMLKVYAGISHENRLRVMKLISKQLLDL
                     KCGKFTEEELELTKNMLIHSATLAQDRQNNLIEQVYNQVTLGNRNLSWLDWIEAIKSV
                     SIEDVIRVGQMINLQAVYFMEGTEE"
BASE COUNT         2169 a         1530 c         1005 g         2040 t
ORIGIN      
        1 tttctagcgt tttttactta ttttttcaat ataaataaga gtccggctaa agctaacata
       61 actaaaattg ctaacgtatc tgctaacttc cattccaaaa tccggtactt ggttctccca
      121 tcgccgcctt gatacccacg cgcctccatc gccgttgcaa gagcatctgc cctcttaaaa
      181 cttgatgcga ataacggaat caaaatagga ataactgact ttaccttctg aataagattt
      241 ccctcattaa agtccactcc acgagctctc tgagcattca taatccgagt ggtatcatcc
      301 atcaaggtcg gtacaaaacg caagctcatg gacaacatca aaccaatttc atgcacagga
      361 actttaaatt tcttcaaagg tgcaagcccc gactcaatac catcagccaa gctaaggggt
      421 gtcgtcgtca aggtcaatag ggttgagaag aaaataatca aaacaaagcg aacaaaaata
      481 atcgccgcct gttgcaaccc ttctacagat aatttaaaaa tccaaaactc ccatagaatg
      541 gtcgctccag gtgtaaagaa aacctgaaag aaagttgtaa atagaataat tcctatcatc
      601 ggtttcaaac cattaataaa aaatgataag cgaatacgtg ataaaacaac cattcctaaa
      661 acaaatgcta tcaacaaggc attggtgacc aaattattgg cccaaaaaat catcaataga
      721 aatccaaaca ttgctaaaag cttacttctt ggatccaagc gatgaataat tgaatcccca
      781 ggaatatagc gacctaaaat taatttatcc atgtgtcacc atccccgtaa attcttcaat
      841 tgtaatagga agacgttcaa atacaaagcc tcttctctcc aaattagctg caaacttagt
      901 aatcttaggc actcccaact gaatactctc taaaaaatct acctcttgaa aaatatcgac
      961 tggtttacca gaacggacca gctttccctt ttccataatg taaacaaaat cagcatagtt
     1021 agccacatcg tccatcaaat gagttaccaa aacgattgtc atgcctgatt catgaagctt
     1081 tttgaaaata tccatcaatt cctgacgacc cgcaggatcc aatccagccg ttggttcatc
     1141 caaaactaag atacttggtt ccattgccag aatcccagca atagctaccc gacgcatttg
     1201 accaccagat agttcaaaag gactacgctc aaacaagctt tcatcaattc caaccaaggc
     1261 caacttttca cgcgcaatcg tttcagcctc ttcctgagaa actccgaaat tttgtggacc
     1321 aaaagcaacg tcttttaaga ccgtttcatc aaacacttga ctttcaggaa attggaacac
     1381 caaccccact ttcttcctga cttgcttaat atccttattt tcagacgtcg ctgtaatcac
     1441 aacatcatca ataactactc ttccttctgt tggtacattt aatccattca agagttgtaa
     1501 aatcgttgat ttgcccgaac ccgtatgccc aataagggcc gtgtaagagc catcaacaat
     1561 ctccaaatcc acaccaaaaa gcgcacgccc ctcaaaagga gtgccagctt gataggtata
     1621 gcttacttct tggagatcaa ttcccataaa gtttcctcta attcttcctc tgtaaaatag
     1681 cggagcggta aatcaagtcc agtctggcgc aaagatgaag ccagttctgt cgtaaacggt
     1741 ctatccaagt ctaaatctac caaatcttct cgcataaata gttcatttgg agtgctaatt
     1801 gattcaacct gtccattttt catcacgata actcgatcac tcaatgcaac ctcatccaaa
     1861 tcatgtgtta tagagataac cgtcatacca tgacgctcct taatttcacg gacaatttta
     1921 atcaagtcga gacgaccttc tggatccaac atagacgtag cctcatccaa aataataatt
     1981 tttggacgca aggcaaccac tccagcaatc gccaccctct gcttctgacc accagataaa
     2041 cgagcaggct cacgtgtttt gaaatcagtc attccaacca attccaaagc ttcgtcaact
     2101 cgactacgca tctcctccaa agggattccc tgattctcta aaccaaatgc aacatcatct
     2161 tcaactgtag cacccacaaa ttggttatct ggattttgaa aaaccatacc aatcaagcgt
     2221 cgcttatccc atacattatc aatggttaag gcatcaccgt caatataaat atcacctgat
     2281 tcagcttcca acaaaccatc aatcaaacga actgttgttg atttacccga accattatga
     2341 ccaataatag atagccactc tccctgtttc acgtgaaacg aaacatcatt tagagtatat
     2401 tgctcatcct cttggttgta tttatatttt aaatttttta cttcaataat attcatcatt
     2461 taaatgtatc tttaaacaag aaggacgcac ccttgaaata atcatagcca gaatataggg
     2521 tgaagaaaag tgcaatatag agtgttattt gccccacgac gttccagtgt aagagcagga
     2581 aaataactgc aaacatctgt gaaaatgttt tgatttttcc tggcatagcc gcagctagaa
     2641 ctgttcctcc attttccacc aagagtagac gaagacctgt cactgccaat tcacgacaaa
     2701 taataattgc aactacccaa gctggagcaa agccaagctc tacaagcatg ataaatgctg
     2761 tcatcaccaa aatcttatct gccatcggat ccgcaaattt tccaaagttt gttacaacct
     2821 gccatttacg agccaagtag ccgtctagat aatccgtaat actagctaat gcaaaaataa
     2881 gtgctgctaa gacatgacta attgttgaat cccaaacggt cagtaacaag ataaaaattg
     2941 gaattaccaa aatcctacct atcgtcaatg cattgggaat attttctttt ttcatataaa
     3001 acctttattg ttcaaaattt attgtaattg agcctgtatc tgctgtcaag gctgatagat
     3061 ctaacttttg accacctaca cttacctcaa cccctttaac aacaccaaga acaagtgtag
     3121 tagaagtcac tccttcttca atagtagtag ttactgttgg attatcaggt gttagtgtaa
     3181 cgcccccctc taacaaggtg tcagaaaggc tgatccaact cgttgtattt tttgctgtta
     3241 cagttacttc tactggataa gtcactgttt taagggtcgc aacaatgtta gaacctgttc
     3301 ctgaaatagt cacattttct atagcggaac tacttgaact cgttgaattt gactgcgcct
     3361 gctcagtaga actcgtctct gtgccactac ttgcttcaga tacagattgc tcaactatac
     3421 tatatgacgt tgtagtaggc gtaatagatg ctctattttg gagcctgcta taaacaatat
     3481 aagtcacaaa aataataatc aaccccgtcg caagtaataa gtaaatcaac ggaagataag
     3541 agttcttttt acgtttacga accttatagc ttcttttcaa ttctgaagag cgtagttctt
     3601 cttctccatc ttcataatat ttcactaaac tattggtctc gtaagcatcc agtagaacat
     3661 ctgcatctaa ttccaaagcc tcagcatatg cttttaaaat agactgaaca tcatctgagt
     3721 ttgcaataaa atcaaaatca ttgtactcaa gtgcctgcaa atatttagct tggatttttg
     3781 ttatccgttg caagtcaaca aatgtccaac cccgtccttc tctggctgtt ctaagtactt
     3841 cccctatact cttttgtctc ataatatcct ctctctatcg cccatcatgt acagtatact
     3901 attctaacaa aattccaaag aaatttcgac gggttgcgcc cacttatttt ggaaaaatcg
     3961 tgaaatctgt catatcacag tgatcaataa agcgacgacc tgcctctctg atgtcatcta
     4021 actgaagact ttgtatcatt tgaggtatat caaaaacatt ttcatattct gaatactgag
     4081 aaacaaagtg actagctgta aactcaagag aatttaagct acgaataaaa tctccataca
     4141 tctcgttttt caacaattgt aaatgatcct ctgtcacatc tgcatcatcc tcaaatttcc
     4201 taagtgcttt catcagtata ctagaaagcg taatgggttc ttgagtatct cccgagataa
     4261 tcaaatagtg gtattcaggt gtaacctcta attggaactg gaaagaagaa tcaatttttc
     4321 cctgctcgta taactgttga tagcgttttg aagtccaacc aaacaacatg gcaaataaaa
     4381 attgtaaact aagccgatat ttctgaatag tctccttatc aacctcgtca tttccccgta
     4441 aaccaacagc caattttggg gtagatactt caaattgttc tgagagatgt tcctgtatcg
     4501 gcaacttttg gatacctgcc aattcaaacg actgagctgg attatccatc tgagctactt
     4561 gataacttga aatttgtttc caaactgcct ctaaatcaaa attaccaata acgaataaat
     4621 tcatgttact tggatgataa aacacatcaa aattctcatg taaatcatcc gcagtaattg
     4681 cagcaattga ttcaactgtc cctgctatat cataggccaa aggactttct ggataaagcg
     4741 atgatagaat tcccgtaaac aagcgataat ctgcatcatc ttgatacatc tcgatttctt
     4801 gttcaataat cccctgttct ctttctacat tgtcttctgt aaaatacggt tctcgaacaa
     4861 aagattgtaa aagtgataga gactccaata ctttctgagt cgttgaaaat aagtaactag
     4921 tctgtctaaa actggtataa gcatttgcgc ttgctcccaa tttagcaaac tcattcataa
     4981 tatcctcttc attctcagtt tcaaacagct tatgttctaa aaaatgtgca atccctgcag
     5041 gataaacaac acttttacca ttagccaatg taaatcgagt atgaataccc ccaaaatttg
     5101 tcgttagaat tccatatgtc tcatggaaat ctactttagg aagcaaaata actgtcaacc
     5161 cattgtcaac tttcccataa aagacagatt ctttcatgta aggatacttc ttctcaacta
     5221 acttcattct tctgttccct ccataaagta aacagcctgt aaattaatca tctgtcctac
     5281 tcgaatgaca tcctctattg ataccgattt gatagcctca atccaatcta accaacttaa
     5341 atttctattt cctaaggtaa cttgattata tacttgttct atcaaattat tctgcctatc
     5401 ttgagccaag gttgctgaat gaatcaacat gttttttgtc aactctaatt cttcttctgt
     5461 aaacttacca cattttaaat caagtagttg tttactaatt aacttcatta ccctgagtct
     5521 gttttcatgg ctaattccag catagacctt cagcattcct gaaaaaatag aaacctgact
     5581 gccaattgta taggccaaac tttctttctc acgaacattc ataaataact tcgaatggga
     5641 gaaagcaccc agtagaccat taaataccat caaagccgga tagtttacat cgttgtaaac
     5701 tacttgtaaa tgatatgcca attccaaaat ggactgcctt gcctgtttac gctcgatttt
     5761 ttcttgcgtg atgtttgagt attcctgatt atattctaac tctaattttg gatttctata
     5821 agtaaaacca aaatcttcaa gttttctttt gacttgttct ctgtcaacct tccctaagac
     5881 aaatatatca attttatcca tacgcaacat attccgataa atctgaaaag ttgattctgc
     5941 tgtttctttt tcaaccaaat caagcctacc gacgcgtgga atttgaagag agggatcttt
     6001 ataaaaaagc ttactcattt caacatctgc atgataaaaa ttatcttcta tctctgactg
     6061 aagaaaattg attaaattcg ttttttcaac ctcgaaaatc tggctatcaa atcctcgccc
     6121 ctttttcagt ggtctaaata tacatgtgta taaaaaatca agaatctcca ctgtaatatc
     6181 ctcattttct ggtaagtgac gaggactgac atatgaaatt gtcacatcta cacagtgcac
     6241 cctaccacgt ttcgaaactg aggtcgagaa ctgagcacca tacaattctg ccaatcttct
     6301 ccgaacagcc tgagcagtct gaaattcttg gttacccatt tcaaaaatat ttgcaactaa
     6361 cacacgacca gcaactgtag cctcactcat ttcagctgca aagcgaatac gtatacgatt
     6421 tgtcgtaaac tgatctgtat caataaaatg aagatctact ccctcttgta atttcatcgt
     6481 cttcctcttt caaacattgt accttccatt ataccatttt gtgataaggt atgcttggct
     6541 ttagcatttg attgctttac acgcctttat agttgatttt actggatttt ttgaaaaatg
     6601 tgtaaacttt ataaagcgtt acattttcct agaaagtcca caaaaaggtg aacaaatttt
     6661 acaaataaaa aaaggttatc aaagggcgat aacctaaaaa ttttatgagt tcagcaggca
     6721 agtactagcg tagtgatcag ctac
//
LOCUS       DASFQD010000116         6543 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.117, whole genome shotgun sequence.
ACCESSION   DASFQD010000116 DASFQD010000000
VERSION     DASFQD010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6543)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6543)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6543
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.117"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..286
                     /locus_tag="U1021_001869"
     CDS             <1..286
                     /locus_tag="U1021_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEM4712375.1"
                     /translation="QGWQYQHEVYHRFLASKGIRPSMSRKGTSTDNSMMESFFGVLKT
                     EMFYGFEKNFKSLDQLEQAITEYIFYYNNKRIKTKLKGLSPVQYRTKSFQ"
     gene            405..1274
                     /gene="rfbA"
                     /locus_tag="U1021_001870"
     CDS             405..1274
                     /gene="rfbA"
                     /locus_tag="U1021_001870"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002276675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEM4712376.1"
                     /translation="MKGIILAGGSGTRLYPLTRAASKQLMPIYDKPMIYYPLSTLMLA
                     GIKDILIISTPQDLPRFKDMLGDGSELGISLLYAEQPSPDGLAQAFIIGEEFIGDDNV
                     ALILGDNIYHGNGLTKMLQRAASKEKGATVFGYQVKDPERFGVVEFDADMNAISIEEK
                     PEEPKSNFAVTGLYFYDNDVVEIAKNIKPSPRGELEITDVNKAYLDRGDLSVELMGRG
                     FAWLDTGTHESLLEAAQYIETVQRLQNVQVANLEEIAYRMGYITKEQVYELAQPLKKN
                     EYGQYLLRLIGEA"
     gene            1274..1867
                     /locus_tag="U1021_001871"
     CDS             1274..1867
                     /locus_tag="U1021_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018029578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HEM4712377.1"
                     /translation="MTENFFGKTLAARPVEAIPGMLEFDIPVHGDNRGWFKENFQKEK
                     MLPLGFPESFFAEGKLQNNVSFSRKNVLRGLHAEPWDKYISVADGGKVLGTWVDLREG
                     ETFGNTYQTVIDASKGIFVPRGAANGFQVLSDFVAYSYLVNDYWALELKPKYAFVNYA
                     DPSLDIKWENLEEAEVSEADENHPFLKDVKPLRKEDL"
     gene            1867..2352
                     /locus_tag="U1021_001872"
     CDS             1867..2352
                     /locus_tag="U1021_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEM4712378.1"
                     /translation="MFQAFLEIAEQLNKLGITPLLMGSVGLERRTGRDWQARDLDIHV
                     PSDPRGWEAPDEERIYRADELIVLMNQLGYVLVDRHEHEFHKDGLSVEFGGLHSLPEF
                     AGVELEDLEELETVGVRYYLPTLEQYLKIYQASSKDSYRAENNNQKDFAKIAYLKEIL
                     R"
     gene            2541..3587
                     /gene="rfbB"
                     /locus_tag="U1021_001873"
     CDS             2541..3587
                     /gene="rfbB"
                     /locus_tag="U1021_001873"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002884100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEM4712379.1"
                     /translation="MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN
                     KANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTN
                     FIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSP
                     YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLY
                     GEGKNVRDWIHTNDHSTGVWAILTKGHMGETYLIGADGEKNNKEVLELILEKMGQPKD
                     AYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSQGLEETIQWYTDNQDWWKAEKE
                     AVEANYAKTQEVIK"
     gene            3642..4493
                     /gene="rfbD"
                     /locus_tag="U1021_001874"
     CDS             3642..4493
                     /gene="rfbD"
                     /locus_tag="U1021_001874"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019780653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HEM4712380.1"
                     /translation="MILITGANGQLGTELRYLLDERGVEYVAADVAEMDITDADKVDA
                     FFAEVKPSVVYHCAAYTAVDMAEDEGKELNYKINVTGSENVAKAAAKYGATLVYISTD
                     YVFNGDLPVGKEWQVDDQPDPQSEYGRTKRKGEEAVEKFADKFYTVRTAWVFGNYGKN
                     FVFTMQNLAENRDTLTVVNDQHGRPTWTRTLAEFMVHLVDTKQAFGYYHLSNDAAEDT
                     TWFDFATEILKDTNTKVLPVDSSQFPAKAKRPFNSTMSLDKAKATGFVIPTWQEALEA
                     FYKQEKK"
     gene            4510..5553
                     /locus_tag="U1021_001875"
     CDS             4510..5553
                     /locus_tag="U1021_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4712381.1"
                     /translation="MKKKAIVKSLLMSGIFLALLGGATLLSGAVPVVAAETSQSTTYH
                     LTDDEKVAVREYIQAKMTIDMQEYRLAFLEGMMEEMASGSAEAAWDEEIADLKANLTA
                     EQVVVLDELEANLIGSIAQHYHYLFETLTVAGKSGREEAAAIVSKYESEDDASTPEAE
                     LAALKYAREVIVELLNKESAAIDNYIAYAEATGQELAGLLESGNSNLESITSATIGYG
                     QALATASQPKFPYDFSEMDRQIAELTASLQSKVEDKSTANIENTGAQTSQSVTNDSND
                     LQDVPGQGGGQISDVATGKGNISEAGQKKVIPNDNAKVLPKTSGKSSLPLTVLGLITI
                     FAGWLLTKKQEEK"
     gene            5591..>6543
                     /locus_tag="U1021_001876"
     CDS             5591..>6543
                     /locus_tag="U1021_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GBS Bsp-like repeat-containing protein"
                     /protein_id="HEM4712382.1"
                     /translation="MFLHVKYIKEMFVKKRTLLFLSLCASALNAQLVQADMVNAPSSQ
                     VSSSQVAETGGQLSVVDEAGQIKAILSNIQGEIIGVTAQFSSETNSGITVTFSMDEQG
                     RYVAVLDRSAFAEEDQVFSLKLTAQLTDGSFQTLSDYSFEWKKDVVSAAEKPTALDNS
                     DATPSKIEEEATSTTTSSTVNSSLTAGATSSTSNSLTRSSSNTIAGSSNGSTSVPSAR
                     VSTASSSVNVTQPTGTITIENRNDAQGTFDVRVTNVSSPKDIASVILPTWSQTDDLRW
                     YEAKRQADGSYKLTVNKKDHKYRTGTYTVHLYYKDSSGGLTG"
BASE COUNT         2022 a         1259 c         1488 g         1774 t
ORIGIN      
        1 ccaaggttgg caataccaac atgaagtcta tcaccgtttt cttgcaagta aaggcatacg
       61 tccttccatg tctcgcaagg gaaccagcac agataatagc atgatggaat ccttctttgg
      121 cgtcttgaaa acagaaatgt tttacggatt tgagaaaaat ttcaagtctc tggatcaact
      181 ggagcaagct atcaccgagt atatttttta ctacaacaat aaacgcatta aaacaaaact
      241 aaaaggactt agtcctgttc agtacagaac taaatccttt caataatatt ttttgtctaa
      301 ctttttgggg tcagtacagt tgtgtcacag gcttttttct tatgacaata tctttaaaaa
      361 tatggtataa tgaactgata ttaatttagg gaaggtactc ttatatgaaa ggtattattc
      421 tagctggtgg gtcaggtaca cgcttgtatc ctttgacgcg cgcagcttca aaacagttga
      481 tgccaattta cgataaacca atgatctatt atccattgtc aacattgatg ttggctggaa
      541 tcaaagatat tttgattatt tcaactccgc aagatcttcc acgttttaag gatatgttag
      601 gagatggttc tgaacttgga atttcacttt tatatgcaga acaaccaagt ccagatggtt
      661 tggcgcaagc ctttattatc ggtgaagaat ttatcggtga tgacaatgta gccttgattc
      721 ttggtgataa catctaccac ggaaatggtt tgaccaagat gttgcaacgt gctgctagca
      781 aagaaaaggg agcgactgtc tttggttatc aagtaaaaga tccagaacgg tttggtgttg
      841 ttgagtttga cgctgatatg aatgccatct ctatcgaaga aaaacctgaa gagccaaaat
      901 cgaattttgc tgttactggt ctttatttct atgacaatga tgttgtggag attgcgaaaa
      961 atatcaagcc ttcacctcgt ggcgagttgg aaatcacaga tgtcaacaag gcttacttag
     1021 atcgaggtga tttatcagtt gaattgatgg gccgtggatt tgcttggttg gatacaggta
     1081 cgcatgaaag cctcttggaa gctgcacagt acatcgaaac ggttcaacgt ttgcaaaacg
     1141 ttcaagtggc taacttggaa gaaattgctt accgcatggg ctacattaca aaagaacaag
     1201 tgtatgaatt ggcacaaccg cttaagaaaa atgaatacgg acaatacttg ctccgtttga
     1261 ttggagaagc ttaatgacag aaaacttttt cggtaaaaca ctagcagctc gcccagttga
     1321 agctattcca ggaatgttag aattcgacat tcctgttcat ggcgacaacc gtggctggtt
     1381 caaggagaac ttccaaaagg aaaaaatgtt gcctctcggc tttcctgaaa gcttctttgc
     1441 agaaggaaaa ttgcaaaata atgtttcttt ctcccgcaaa aacgttcttc gtggtcttca
     1501 cgcagagcct tgggataaat acatttcagt agcagacggc ggtaaggtct tgggaacttg
     1561 ggttgatcta cgtgaaggcg aaaccttcgg taatacctac caaaccgtta tcgatgcttc
     1621 aaaaggtatc ttcgttccgc gcggagcagc caatggtttc caagttttgt cagatttcgt
     1681 ggcttacagc tacttggtta atgactactg ggctttggaa ctcaaaccta agtatgcctt
     1741 cgtcaactac gctgacccta gcctcgacat caagtgggaa aacctagaag aagcggaagt
     1801 ttcagaagca gatgaaaacc acccattcct caaggacgtc aagcctttga gaaaagagga
     1861 cctctaatgt ttcaagcctt tttggaaata gcagagcagt taaacaagtt aggaatcact
     1921 cccttgttaa tgggttctgt cggtctggaa aggcggacag gacgagattg gcaggcaagg
     1981 gatcttgata ttcatgtgcc cagtgaccca cggggatggg aagcgccaga tgaggagcgg
     2041 atttaccgtg cagatgagct gattgttctg atgaatcaac ttggctatgt cctggttgat
     2101 cgtcatgaac atgaatttca taaagacggc ttatctgttg aattcggagg cctacattca
     2161 ctgcctgaat ttgctggtgt agagctagaa gatttggaag aactagaaac agtaggtgtt
     2221 cgctattacc taccgacact tgaacaatac ctgaaaatct accaagcttc ttcaaaagat
     2281 tcctaccgtg cagaaaataa caatcaaaaa gactttgcta agattgctta cttgaaggaa
     2341 atcttgaggt aaaaaagcga gcgaagcgag cagttctgtg tgtcatcgcc gtagtgagaa
     2401 gctcctttgc tttgctaagg agcgggggaa accatgagac cttaggctca tggtttagta
     2461 atgaaacacc ttggtggttg cttacgaccc cactacctaa gatgacacac aaaaaagaaa
     2521 aaaacttttc ggagaaaaaa atgtctcaat ttaaaaatat tatcgtgact ggtggagctg
     2581 gtttcatcgg ttcaaacttt gtacactatg tatataacaa tcatccagac gttcacgtaa
     2641 ctgttttgga taaacttact tatgcaggaa acaaggctaa cttggaagct attcttggtg
     2701 accgtgttga gctggttgtt ggcgacattg cagatgctga gttggttgac aaattggctg
     2761 ctaaggcaga tgccatcgtt cactatgcgg cagaaagcca caacgacaac tctctcaacg
     2821 atccaagccc atttatccat accaacttta tcggtactta cactttgctt gaagcggctc
     2881 gtaaatacga catccgtttc caccatgtat cgaccgacga agtatacggt gaccttcctt
     2941 tgcgtgaaga tttgccaggt catggcgaag gtccaggcga gaaatttact gcggaaacca
     3001 actacaaccc atcatcacct tactcatcaa ccaaagctgc ttcagacttg attgtcaaag
     3061 catgggtgcg ttcatttggt gtcaaagcaa ctatctcaaa ctgttcaaac aactatggtc
     3121 cttaccaaca catcgagaaa tttatcccac gccaaatcac caatatcttg gcaggtatta
     3181 agccaaaact ttacggtgaa ggtaaaaacg tccgtgactg gattcatacc aacgaccact
     3241 cgactggtgt ttgggcaatc ttgacaaaag gccatatggg tgaaacttac ctaatcggtg
     3301 ctgacggtga gaagaacaac aaagaagtgc ttgaattgat tcttgaaaaa atgggtcaac
     3361 caaaagatgc ttacgaccac gtgactgacc gtgcaggaca cgatttgcgc tatgctattg
     3421 acgcaagcaa acttcgtgac gagcttggtt ggacaccaca attcacagac ttctctcaag
     3481 gtttggaaga gactatccag tggtatacag ataaccaaga ctggtggaaa gctgaaaaag
     3541 aagctgttga agccaactat gctaagacac aggaagttat taaataagat tattaaaggc
     3601 tagggctctt gcccaagcct ttcttgaaat aaggagcaaa tatgatttta attacaggtg
     3661 caaatggtca gttgggtaca gaattgcgtt atctcttgga tgagcgtggt gttgagtacg
     3721 ttgccgctga cgtagcagaa atggacatta cggatgcaga taaagtagat gccttctttg
     3781 cagaagtaaa gccaagcgtt gtataccact gtgcagccta cacagctgtt gatatggcag
     3841 aggatgaagg caaggaactc aactacaaga ttaacgtaac aggttctgag aatgttgcta
     3901 aagcggcagc taaatacggt gcaacccttg tctatatctc aacagactat gtcttcaatg
     3961 gtgatttgcc agtcggcaaa gagtggcaag tagatgacca accagatcct caatctgaat
     4021 acggtcgcac caagcgcaag ggtgaggaag cagttgagaa atttgctgac aaattctaca
     4081 ctgttcgtac tgcttgggtc tttggtaact acggtaaaaa ctttgttttc actatgcaaa
     4141 atcttgcgga aaaccgcgat actttgacgg ttgtcaatga ccaacacggt cgcccaactt
     4201 ggacccgtac ccttgcggaa ttcatggtac acttggtgga caccaagcaa gcatttggct
     4261 actaccactt gtcaaacgat gcagcagaag atacgacttg gtttgacttc gcgacggaaa
     4321 tcctcaagga taccaacacc aaggtattgc cagtggattc tagccaattc ccagccaagg
     4381 caaaacgtcc attcaactca accatgagtt tggataaggc aaaggcgaca ggttttgtca
     4441 tcccaacttg gcaagaagct ttggaagcat tttacaaaca agaaaagaaa tagtttacag
     4501 gagatgtgta tgaaaaagaa agcgattgtt aagtcgttgt tgatgtcagg aatttttctg
     4561 gctttactag gaggtgctac attactgtcc ggagctgttc cagttgtagc agcagagaca
     4621 agtcaaagta cgacctatca tttaactgat gatgaaaaag ttgccgtacg tgaatatatt
     4681 caagctaaaa tgactatcga tatgcaagaa tatagattgg cgtttcttga gggaatgatg
     4741 gaagaaatgg cttcgggtag tgctgaagct gcgtgggatg aagaaattgc agacttgaag
     4801 gcaaacttaa cagcagagca agttgttgtt ttagatgaac tcgaagcaaa tttaattggt
     4861 agcatagccc aacattacca ttacttattt gagacactta cagtcgctgg aaaaagcgga
     4921 cgagaagaag cggcggctat agtttctaag tacgagtctg aagatgatgc aagtactcct
     4981 gaagccgaat tggctgcatt gaaatacgct agagaagtta tcgttgaact actgaataaa
     5041 gagtcggcag cgattgataa ttatattgct tatgcagaag caactggaca agaattagct
     5101 ggattattgg aaagtggaaa ctctaattta gaatctatta catctgcaac tataggatat
     5161 ggtcaagctc ttgcaactgc ttcgcaacca aaatttccgt atgacttttc agaaatggac
     5221 cgacagattg cagaactaac tgctagtcta caatcaaaag tcgaggataa aagtacagct
     5281 aatattgaaa atactggggc acaaacaagt caaagcgtta caaatgactc aaatgatttg
     5341 caagatgttc caggtcaagg gggcggtcag atttctgatg tagctacagg caaaggcaat
     5401 atttccgaag caggtcagaa aaaggttatc ccaaatgata atgctaaggt attgccaaaa
     5461 acttcaggga aatctagtct tccattaact gtactaggac tcataacaat ttttgctggt
     5521 tggttattga caaagaagca agaagaaaaa tagaagatta gtgtaattgc atctattttg
     5581 agaaatatag ttgtttttac atgtgaaata cataaaggag atgtttgtga aaaaaagaac
     5641 gttattattt ctttctttgt gtgcatccgc gttgaatgct cagcttgttc aagcggatat
     5701 ggtaaatgcc ccatctagtc aagtttcttc atctcaggtt gctgaaactg gcgggcagtt
     5761 atctgtcgtt gatgaggctg gtcagattaa agctattcta tcgaacattc aaggggaaat
     5821 tattggtgtt acagcccagt ttagctctga aacaaatagc ggcattactg tcacattctc
     5881 aatggatgag cagggtagat acgtagcggt tttggatcgg tctgcatttg cggaggaaga
     5941 ccaagtcttt tcgctgaagt taacagcaca attaacagat ggaagttttc agaccttatc
     6001 agattatagt ttcgagtgga agaaggatgt cgtaagcgcg gctgagaagc ctactgcttt
     6061 ggataatagt gatgcaactc cgtctaaaat tgaggaggaa gcaacttcga ctactacaag
     6121 ctcaacggtt aattctagtt tgacagcagg tgcaacaagt agtacttcga attcgctgac
     6181 aagaagttct tcaaatacga ttgcaggaag ttcgaatggc tctacaagtg ttccaagtgc
     6241 tcgagtcagt acagcttcca gttcggtcaa tgttacacag ccaacaggta ccatcacaat
     6301 tgaaaatcgt aacgatgccc aaggtacctt cgatgttcgt gttactaatg tttcatcacc
     6361 gaaagatata gcaagtgtta tcttacccac ttggtcccag acggatgatt tacgttggta
     6421 cgaagcaaag cgtcaagcag acggcagtta taagttaact gttaataaga aggaccataa
     6481 gtatcgtaca ggtacctaca cggttcattt atattataag gactcaagtg gtggtctaac
     6541 agg
//
LOCUS       DASFQD010000117         6449 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.118, whole genome shotgun sequence.
ACCESSION   DASFQD010000117 DASFQD010000000
VERSION     DASFQD010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6449)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6449)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6449
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.118"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..919
                     /locus_tag="U1021_001877"
     CDS             <1..919
                     /locus_tag="U1021_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4712383.1"
                     /translation="HFLQSDQVRQSLPVAFEQLHQTVEENGQRKNLSISLYISDRRDF
                     GNQVSLESSTGQPIKLSDRGIVLTEKLAQIYGVSVGDKLSLTLEDKEVSVRVEAVADM
                     YAGHFIYMTDSYYEQVTGKQKTANAYLVQLKDSQLGHIQTLASQLLAMPAVRSLVQNT
                     SLIDMLTTIAGSLQTIMTILVILSILLGLVILYNLTIINMSERIRELSTIKVLGFHNK
                     EVTMYIYRETIALSLIGMLVGLVGGIYLHKLLLAMIGSDSIRFNPSVGLEVYLIPILA
                     ISGILAALGWYVNHHLRKVDMLEALKSVD"
     gene            1072..2388
                     /locus_tag="U1021_001878"
     CDS             1072..2388
                     /locus_tag="U1021_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712384.1"
                     /translation="MCYNHLMKKISDLGLTGRKLVREGLILVFIGIGFLIAGWQFPGL
                     ILRFVHAGLFFLALYELSMTFFRKKKSSESVIALVGKAVLFGILASLDLAVQIPLYFA
                     AIFVGIYQLFTALINFITFYLYRKDGVQPRIRYLIDGIWLSLLGSASLFVSGTQLVVQ
                     TIVIGGYLILYGLTNLRDGFLFEEAIEQQNLKRHVRLPLPLFLAALIPRMTLQKVNDY
                     LADNKGQTAQSIYNRHKEIAELPALEVFVHVGEEGFGAVGHVDLSYKGQVYGYGSYDV
                     LSERLGGAIGDGVLFKAERQAYIDFCNQEGMTMLGYQLSLTPEQEEAVEARLAEIDNL
                     LLPWNPSPEKVSKTADGQPIEMYAYRMKEEIGAALFKFKKSKFKTYFVLSTNCVLLAD
                     SVIGQAGTDVLGLRGFIAPGTYQSYLDQEYEKPYSLVVAKNIYYRK"
     gene            2473..5109
                     /gene="polA"
                     /locus_tag="U1021_001879"
     CDS             2473..5109
                     /gene="polA"
                     /locus_tag="U1021_001879"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEM4712385.1"
                     /translation="MKKNKLLLIDGSSVAFRAFFALYNQIDRFKNANGLHTNAIYGFN
                     LMLDHMMKRIEPTHILVAFDAGKTTFRTEMYADYKAGRAKTPDEFREQFPFIRQMLDA
                     MGVKHYELDQYEADDIIGTLDKMAERTDIPFDVTIVSGDKDLIQLTDENTVVEISKKG
                     VAEFEEFTPAYLMEKMGITPTQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLTEFGSL
                     DGIYENIDSMKASKMKENLIADKEQAFLSRTLATIDTNAPIEIGLDDIVYQGPKLEEL
                     GQFYDDMGFKQLRDQLGTTSSQEEAVLDFQIVTEISPAMLKQDQFFYFEILGENYHRE
                     DLVGLAWGDKDKIYVGGPELLDSPVLRDFLENQTIKTYDFKRGKVLLDRKEITLPPAT
                     FDSRLAKYLLSTVEDNSLTTIANLYGQTSLVPDEAVYGKGAKLDLPEREIFFPHLARK
                     VQVLIETEEPMLTKLEENQQLDLLFDMELPLANVLAKMEIAGIKVEAETLKAMQSENE
                     VLIDQLTKEIYELAGQEFNINSPKQLGTILFEEMGLPLEYTKKTKTGYSTAVDVLERL
                     APIAPVVSKILEYRQITKLQSTYVVGLQDAILEDGKIHTRYVQDLTQTGRLSSTDPNL
                     QNIPVRLEQGRLIRKAFVPSLENSVLLASDYSQIELRVLAHISQDKHLIEAFQQGADI
                     HTSTAMRVFGIEKAEDVTPNDRRNAKAVNFGVVYGISDFGLSNNLGITRKEAKAYIDT
                     YFERFPGIKNYMETIVREARDKGYVETIYKRRRELPDINSRNFNVRNFAERTAINSPI
                     QGSAADILKVAMINLDKALTEAGLATRMLLQVHDEIVLEVPVAELETVKAMVKETMES
                     AISLSVPLIVDENEGPTWYEAK"
     gene            5122..5877
                     /locus_tag="U1021_001880"
     CDS             5122..5877
                     /locus_tag="U1021_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEM4712386.1"
                     /translation="MKKIVLCIGLCSLLLAGCGKTAQKAEKTPASSGEEFSTTLPILQ
                     EKQDTTNEQFNVLANAELVAVNSTPPADETQKGHKIYAANNGVAEKDENGNIKEYFRY
                     YDVPSTWTINAENTQDETVAAVYDVKEGSSNYMVQLYNINAFNQSPLEDGRNMTPEEL
                     EARMLETNHSFSEKTVVTINGQEWQVGRQLLTDQKLARLTFYRMESTAAYDDSVVVGS
                     IYYSLDPGTDKDRTNLKKVIGQVKDVVYQIAKK"
     gene            5997..6434
                     /locus_tag="U1021_001881"
     CDS             5997..6434
                     /locus_tag="U1021_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEM4712387.1"
                     /translation="MSYSFQNPSQDIIFDYLKNAKTIAVVGLSSREETAAYRVSKLMQ
                     EAGYKIIPVNPKAAGGTILGELVYSSLAEIDQPIDIVDVFRRSEFLPEVAQEFIQSNA
                     KVFWAQLGLESQEAEKLLRQAGRNDIVMNKCIKIEYLEMKEQY"
BASE COUNT         1928 a         1272 c         1435 g         1814 t
ORIGIN      
        1 acattttctt cagtcagatc aggttcgcca atccttgcca gtggcttttg aacagctcca
       61 tcaaacggtg gaagaaaacg gtcagagaaa gaatctatcg attagtctct acatttcaga
      121 ccgtcgggat tttggaaatc aagtcagtct ggaaagttcg acaggtcagc ctattaaact
      181 gagtgacagg gggattgttc tcacagaaaa attggcgcaa atctacgggg tctctgttgg
      241 tgataagtta tcactgacct tggaagataa ggaagtttca gtcagggtag aggctgtggc
      301 tgatatgtac gcagggcatt ttatctatat gacagatagc tactacgaac aagtgaccgg
      361 caagcagaag actgccaatg cctatctggt tcagttgaaa gacagtcagt tggggcatat
      421 tcagactctt gcaagtcaac tcctagcgat gccagcagtc agaagtttgg ttcaaaatac
      481 ttctcttata gacatgctta ccacgattgc aggctcgctt cagaccatca tgaccattct
      541 agtcattcta tccatcttgc ttggcttggt tattctttac aaccttacaa ttatcaatat
      601 gtccgaacgg attcgtgaat tatccaccat caaggtactg ggcttccaca ataaagaggt
      661 gaccatgtac atctatcgtg aaaccattgc cctttcgctg attggtatgt tggttggact
      721 ggttggtggt atttatctcc ataagctcct tcttgccatg attggttcgg acagtatccg
      781 cttcaatcca tctgtcggac tagaagtcta tctcattcct atcttagcca ttagtggaat
      841 tttggctgct cttggttggt acgtcaatca ccatctgaga aaggtggata tgctggaggc
      901 tttgaagtca gttgattaaa acagtctggg aatagactgt tttaacccga gcctaaaaac
      961 acgaaagcgg atagtctgta ttgtgaacta atttgaaata tgagaaacac agctataaag
     1021 caaaaaaaat cctagtgcat ctaggatttt tctgtaaaca caagtctaga agtgtgctat
     1081 aatcatctca tgaaaaaaat aagtgattta ggattaacag gtcgaaaatt agttagagaa
     1141 ggtctaatct tagtcttcat cggtattgga tttttaattg ctggttggca atttccagga
     1201 ctgattcttc gatttgttca cgcaggttta ttctttttgg ctttatatga attgagcatg
     1261 acatttttca gaaagaagaa atcaagtgaa agtgtcattg cgctagttgg gaaggctgtt
     1321 cttttcggga tcctagccag tctcgattta gctgttcaaa ttcccctcta tttcgcggct
     1381 atttttgttg ggatttatca actttttaca gctcttatca atttcattac tttttaccta
     1441 tatcgaaaag atggggtaca gccacggatt cgctatttaa tagatggaat ttggttatcc
     1501 ttactaggtt cagcttccct atttgtgtca ggcacacagc tggttgttca aacaattgtc
     1561 atcggaggtt atctgatctt gtatggacta actaatctgc gtgatggttt cttgtttgag
     1621 gaggcgattg agcaacaaaa tcttaagcgc catgtccgtt tgcccctacc tttatttttg
     1681 gcagctttga ttcctcgtat gaccctgcaa aaagtcaatg attacttggc ggataataag
     1741 ggacaaacgg ctcagtctat ctacaaccgc cacaaagaaa ttgcggagct tccagcatta
     1801 gaagtctttg tacacgttgg ggaagaaggg ttcggagcag ttggacatgt tgatttgagt
     1861 tacaaaggac aggtttatgg ttatggttca tacgatgtcc tgtctgagcg tttgggtggt
     1921 gcgattggtg atggagtctt gttcaaagca gagcgccaag cttatattga tttctgtaac
     1981 caggaaggta tgaccatgtt gggttatcag ctaagcctga cacctgaaca ggaagaagca
     2041 gttgaggctc gattggctga aattgataat ctgctcttac cttggaatcc aagtcctgaa
     2101 aaagtatcga aaacggcaga cggccagcct atcgaaatgt atgcctatcg aatgaaagag
     2161 gaaattgggg cagcactttt caaatttaaa aaatcaaaat tcaaaaccta ctttgtcctc
     2221 tcaaccaact gcgtcctttt ggctgattca gtaatcggtc aagcaggaac agatgtccta
     2281 ggcttgcgcg gcttcattgc tccaggaacc taccaatctt acctagatca agaatatgag
     2341 aaaccttata gtttagtagt cgcaaagaac atttattatc gaaaatagaa atcctagtca
     2401 ctgactggga ttttctgtta tttcagctct ctaagtccca caaaactccc ccatccatgc
     2461 tataatagag acatgaaaaa aaataaatta ctactcatcg atggctcttc cgtagccttc
     2521 cgtgccttct ttgcacttta taaccaaatt gaccgcttca agaatgccaa cggtctgcat
     2581 accaatgcca tatacggctt caatctcatg ttggaccaca tgatgaagcg gattgagccg
     2641 acccacattc ttgtggcttt tgatgctgga aagaccactt tccgtacgga gatgtatgca
     2701 gactataagg caggtcgtgc caagactcca gacgaattcc gtgaacaatt tccctttatc
     2761 cgtcagatgt tggatgccat gggggtcaaa cactatgagc tggatcagta cgaggcggac
     2821 gatattatcg gtaccttgga caaaatggca gagcggacag acattccctt cgatgtgacc
     2881 attgtcagcg gtgacaagga cttgatccag ctgactgatg agaacaccgt agtcgaaatt
     2941 tccaagaaag gcgtagccga attcgaagaa tttaccccag cctacctcat ggaaaaaatg
     3001 ggcatcactc ccactcagtt tattgacctc aaggctctaa tgggcgataa gtccgataat
     3061 atccctggcg tgaccaaaat cggtgaaaaa acaggtctaa aactcctgac agaatttggt
     3121 tctttggatg gtatctacga aaacattgac agcatgaagg catctaagat gaaagaaaac
     3181 ctgattgcgg ataaggaaca agcatttctt tctcgaaccc ttgccaccat tgacaccaat
     3241 gctccaatcg aaattggtct ggatgacatt gtttatcaag gtccaaagct agaagaacta
     3301 ggacaattct acgatgatat gggcttcaag caattaaggg atcagttagg tacgaccagc
     3361 tcgcaagagg aagcggtact cgatttccaa atcgtaacgg aaatcagccc cgctatgctc
     3421 aaacaagacc agtttttcta ttttgaaatc ttgggtgaaa attatcaccg agaggatttg
     3481 gttggtttag cttggggaga taaggataaa atctatgtcg gagggcctga gctacttgat
     3541 agtccagtct tgcgtgactt tttagaaaac caaaccataa aaacctatga ctttaagcgt
     3601 ggaaaagttc ttcttgaccg aaaagagatt acgctacctc cagctacttt cgatagtcgt
     3661 ctagccaaat acttgctttc caccgttgag gacaattccc taacaaccat tgcaaacctc
     3721 tatggtcaga ccagccttgt tccagatgag gcagtttatg gcaagggtgc taagttagac
     3781 ttgccagaac gcgagatctt tttcccacac ttggcacgta aggttcaggt tttgattgag
     3841 acagaagagc cgatgttgac caaattagaa gaaaatcagc aattagatct tttgtttgac
     3901 atggagttac cactggcaaa tgttttagct aagatggaaa ttgcgggtat taaagtggaa
     3961 gctgagactc tcaaagctat gcaatctgaa aacgaagttt tgattgacca gttgaccaag
     4021 gaaatctatg aactagctgg tcaggaattt aatatcaatt cgcctaagca gcttgggacc
     4081 attctctttg aagagatggg attaccgttg gaatatacca agaaaaccaa gacaggctat
     4141 tcaacagcag tagatgtctt agaacgatta gcaccaattg caccagttgt ttcaaaaatc
     4201 ttggaatacc gtcagattac caagcttcaa tcaacttatg tagtcggctt gcaggatgcc
     4261 attttagaag atggtaagat ccatacccgc tatgtacagg atttgacaca aacaggtcgc
     4321 ctatcttcga cggaccctaa cttgcaaaat attcctgttc gtctagaaca agggcgcttg
     4381 attcgtaagg catttgtgcc atcgcttgaa aatagtgtcc ttttagcatc ggactattca
     4441 cagattgaat tgcgcgtctt ggctcatatt tctcaggaca agcatttgat tgaggccttc
     4501 cagcaaggtg cagatattca cacttcgaca gctatgcggg tcttcggtat cgaaaaagct
     4561 gaggatgtga caccaaatga ccgtcggaat gccaaggctg taaacttcgg tgtcgtctat
     4621 ggtatttcag atttcggtct atccaataac ttggggatta cacgtaagga agctaaagcc
     4681 tatatcgata cctattttga acgcttccca ggaattaaga attacatgga aaccattgtt
     4741 cgtgaggcac gtgataaggg ttatgtagag acgatttaca aacgccgtcg tgaattacca
     4801 gatataaact ctcgcaattt taatgtccgt aattttgcgg aacgaacagc catcaactca
     4861 ccaattcaag gttcggccgc agatattctc aaagtagcca tgattaatct cgacaaggct
     4921 ttgactgaag caggtcttgc gacacgtatg ttattgcaag tacacgatga gattgttttg
     4981 gaagtcccag tggcagagct agaaacggta aaagccatgg taaaagagac catggaatca
     5041 gcgattagcc tgtctgtacc attgattgtg gatgaaaatg agggaccgac atggtatgaa
     5101 gctaagtaag aaaggaagag tatgaaaaag atagttcttt gtattggtct atgtagtctt
     5161 ctgctcgcag gttgtggaaa aacagcgcag aaggcagaga aaacaccagc ttcctcaggg
     5221 gaagagtttt caaccacttt accgattttg caagaaaagc aggatactac gaacgaacag
     5281 ttcaatgttc tagcaaatgc agagcttgta gctgttaata gtacaccacc tgctgacgaa
     5341 acacaaaaag gccacaagat ttatgcggcc aataatggtg ttgctgaaaa agatgaaaat
     5401 gggaatatca aggaatattt ccgttattat gatgtgccat ctacttggac aattaatgca
     5461 gaaaatactc aggatgagac agtcgctgca gtctatgatg ttaaagaagg ttccagcaat
     5521 tacatggtcc aactctataa tatcaatgct tttaatcagt ctccattgga agacggtcgc
     5581 aatatgacgc cggaggaatt agaagcacgg atgcttgaaa caaatcattc tttcagtgaa
     5641 aagacggttg tcacaatcaa tggtcaggaa tggcaggttg ggcgacagtt attaacagat
     5701 caaaaattag ctcgtctgac tttttatcgg atggaatcaa cagctgctta tgatgactcc
     5761 gtggttgtgg gttcaatcta ttattcctta gatccaggaa ccgataaaga tcggaccaac
     5821 cttaaaaagg ttatcgggca agttaaggat gtcgtgtacc aaattgctaa aaaataatca
     5881 aggtagacaa gctataatca gtaacgagtt gaaattgaca agattgtgtt atagcacacc
     5941 ttattcatta agcttttatt gagtctaaca tttaatatac attaaaggag gtctctatgt
     6001 cttattcctt ccaaaatcct agtcaggaca ttatctttga ctatctgaaa aatgctaaga
     6061 ccattgcagt ggtcggtttg tctagtcgag aagagacagc agcctaccgc gtttccaagc
     6121 tcatgcagga agcgggctat aaaattattc cagttaatcc caaggctgct ggtgggacta
     6181 ttttaggcga gttggtctat agtagtctag cagagattga ccaacctatt gatattgtag
     6241 atgttttccg tagaagtgaa tttttaccag aggtagcaca ggaatttatc cagtcgaacg
     6301 ccaaagtttt ctgggctcaa ttgggtttag aaagtcaaga agcagaaaaa ctattgcgtc
     6361 aggcaggccg taacgatatt gtcatgaata aatgtatcaa gattgaatat cttgaaatga
     6421 aagaacaata ctaatagagg ctgggcaga
//
LOCUS       DASFQD010000118         6446 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.119, whole genome shotgun sequence.
ACCESSION   DASFQD010000118 DASFQD010000000
VERSION     DASFQD010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6446
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.119"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            8..493
                     /locus_tag="U1021_001882"
                     /pseudo
     CDS             8..493
                     /locus_tag="U1021_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636750.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            628..1194
                     /locus_tag="U1021_001883"
     CDS             628..1194
                     /locus_tag="U1021_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017647560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712388.1"
                     /translation="MKPKKNIIVPIKIVPRTGTHTFDDVIEQGYCRRLSKYIPDAVIG
                     GFYIYNSKDALPYAKKLKNTIYGKNLSVGYLARLLDVWHRACQLFHITTGSCLADDIF
                     TSKKINNESYYYRGNISDFITDKILDRVQENHRSFSRKANKDIIFAVECEFDVNPDFY
                     HYVINRLGWTKFKYSYLVKAVAGALSEA"
     gene            1246..1482
                     /locus_tag="U1021_001884"
     CDS             1246..1482
                     /locus_tag="U1021_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712389.1"
                     /translation="MKIYKFMFNITYPALVISLYIIFQMKGTMSPWFDTLFVAGGFLV
                     IPLLLLLLGYLSENDHGGTDNEANQAESCSTSEV"
     gene            1439..2803
                     /locus_tag="U1021_001885"
     CDS             1439..2803
                     /locus_tag="U1021_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001242574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsK"
                     /protein_id="HEM4712390.1"
                     /translation="MKLIKLNHAVRVRFNPYIITSKRLFLSRVGMDLFLGMLLINTWV
                     SPYSIPIKSVLSLIFIGIICSIEKFFKSVFISKIQNILYVRESLFDMLIGLNLYEESD
                     NVVTNSATLNFEILPNNIVMVEVPLFGNKFLKLLKNLDEYLIPTLGLPLISKQEFPDY
                     VIYRLGNIEEIQQYVFNSHTLTKEFFEDIPSPIIKLSNTQQFSLKSNTNLGIYGRTGT
                     GKTIALQWYLFNALAKGCGTTDHTYLGVVDGKGADLFALGKLLQEELGEQIAVGSSPQ
                     MLAKLSREFVDIMNERFEIIERNSTLNADAYDLEMTPNFLFVDELASIRDSCGSSKQG
                     KELWNEILQNLGLIARKGRQAGCHLCLSTQDPNAENIPVELRNQISAVLYLGNIGDDR
                     LKMAFSMCELENVPTISDRKGEALFYADGLNSAEPVLTIVPFVDVKTKQDFLQVVRNI
                     LPNY"
     gene            3103..3522
                     /locus_tag="U1021_001886"
     CDS             3103..3522
                     /locus_tag="U1021_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712391.1"
                     /translation="MTYNMTDTTLKIGQLDLDMTQFEVPKKIVILSAKVNNRYNEVNG
                     EKIKTEEVTKITCTALDADKVKVLTEMGISTDDLKAINLEIVGNVDKVATLAQNESLL
                     NVPIELVKPKVRLAWNMARSNWAGVKLVCEDIKILGA"
     gene            3527..4543
                     /locus_tag="U1021_001887"
     CDS             3527..4543
                     /locus_tag="U1021_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HEM4712392.1"
                     /translation="MNTVRIDYFAVTVKNISPESVLTDILLIPLEDFTLNNWGINKYQ
                     RHYACSEIKVYFNEDRTSMGVFIELKGQGCRQYEEFLDGNENNWIALIGRLYQYSVNF
                     TRLDIAHDIFDGSLDVQRVYDYCKKGLCISKAKHFEYHEKSVLENGERVGETVAIGSR
                     GNQQWCIYNKRMEQLSKQELVEYPSWIRAELRCWQDKANIIAEQLFLKRPLSSIYFEA
                     INGHYRFVKPNATDTNRWRRKKVKWWLDYLKTENQTVLSVERTKPTLRQSEAWTEKQV
                     AKTLAKVYTAKYQAYDVQKAEDYIQGLLKEGLSRLTDNDEKDIEQYIREQNSSPLWGQ
                     KKTT"
     gene            4604..4810
                     /locus_tag="U1021_001888"
     CDS             4604..4810
                     /locus_tag="U1021_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3173 domain-containing protein"
                     /protein_id="HEM4712393.1"
                     /translation="MIATVNKNDLVALGFSEGTSKRIIRQGKELLIARGFRVYQNKRV
                     GTIPASIATELLGFDVSLGAHHDS"
     gene            4800..5933
                     /locus_tag="U1021_001889"
     CDS             4800..5933
                     /locus_tag="U1021_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000155506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEM4712394.1"
                     /translation="MTVKKAKNGTWTVDISDGFHPVTKKRIRIIRKGFKTKKEALELE
                     QYIRVVELKEKRFDFLVTTDMLFDILEEEDRQNNRKISYISTQRNNYERHIKPYFINT
                     NLNKLSYEHIFEFREYLKIKPKKQNDSSTLSHNTVNKIMILLKKIFDTGVRKSLIDKN
                     PVENIRKLPISKPTINFWNVEEFNEFRKLITSDEISYDLFFTIAFFTGMRLGEIVALT
                     WYDINLITNSIHITKTAYFVNGTNHINSTKTRAGTRRITINHKLARMLADWKEKQKDL
                     LKEFTTDTENLQVIQSTPLPMTKNMIDKKFKQILARNDYLKKIRIHDLRHSHASLLIN
                     QGEDYLVVKERLGHASITTTIDTYSHLYPSKQKTLANKLDDIF"
     gene            complement(6020..6103)
                     /locus_tag="U1021_001890"
     tRNA            complement(6020..6103)
                     /locus_tag="U1021_001890"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6067..6069),aa:Leu,seq:caa)
     gene            complement(6115..6186)
                     /locus_tag="U1021_001891"
     tRNA            complement(6115..6186)
                     /locus_tag="U1021_001891"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6152..6154),aa:Gln,seq:ttg)
     gene            complement(6198..6270)
                     /locus_tag="U1021_001892"
     tRNA            complement(6198..6270)
                     /locus_tag="U1021_001892"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6235..6237),aa:His,seq:gtg)
     gene            complement(6278..6348)
                     /locus_tag="U1021_001893"
     tRNA            complement(6278..6348)
                     /locus_tag="U1021_001893"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6314..6316),aa:Trp,seq:cca)
     gene            complement(6356..6436)
                     /locus_tag="U1021_001894"
     tRNA            complement(6356..6436)
                     /locus_tag="U1021_001894"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6400..6402),aa:Tyr,seq:gta)
BASE COUNT         2235 a         1042 c         1262 g         1907 t
ORIGIN      
        1 taacagaatt ttttattttg gaattttttt ggtatttttg cttgacaaat tcaggaaaaa
       61 tgataaaatt taggtagacg attatataaa ggagctggtt attatgagat tgcaattgag
      121 attatctcaa gatgctaaaa taattctaga aaaagaaaag cttaagcgac tagaaaataa
      181 tggtgtaatt gctacttatg gagatatcat tgaagaaatt tgcaaaaatt ttagagagag
      241 attaaacgaa atagattggc tatttgtaaa aaatcaacct ttatatgaaa aggtaatttc
      301 ttcttacacc tctctatcac cttctgcatt aacattatct gatgaaacga tacttgtctt
      361 agatgagtta acagctattc tcaattctat acttaatatg aagcgaacag tgtatcgttc
      421 atttactgta agaataattt taaaagcatt tgctttagaa caaaaagata ttagtattag
      481 ttatgttgac taatatttat attttacagt attgggtaga cgattatata aaaaggagaa
      541 aaaatatgaa ttctagagct tcaccaatac ttatttaaga atactgactg tgacaataaa
      601 atagagaaag agaaatgagg taataatatg aagcctaaaa agaatatcat agtaccaata
      661 aagatagtcc caagaactgg aactcatacc tttgacgacg ttatcgaaca agggtattgc
      721 cgtaggctat caaaatacat tcccgatgca gttattgggg gattctacat atacaattca
      781 aaagatgcat taccatatgc aaaaaagctt aaaaatacta tttatggtaa gaatttatcc
      841 gttgggtatc tagcgagatt gcttgatgtg tggcatagag cttgtcagtt attccatatt
      901 acaacaggtt catgtttggc tgatgacatt ttcacttcaa aaaaaattaa caatgagtcc
      961 tattattaca ggggcaatat ctcggatttt atcactgata agattctaga ccgtgttcaa
     1021 gagaatcacc gctccttctc aagaaaagcc aataaagata ttatttttgc tgttgaatgt
     1081 gaatttgatg taaatcctga cttttatcat tatgttataa atagactagg gtggactaaa
     1141 tttaaatata gctacttagt taaggctgtt gcaggggcgt tatccgaggc ttagaattaa
     1201 ggggagctac cccctcccct tttggtttta tgaaaggaaa ttattatgaa aatttataaa
     1261 tttatgttca acataaccta tcctgctcta gttatttctt tgtatattat attccagatg
     1321 aaagggacga tgtctccgtg gtttgatact ttgtttgtag ctggaggttt tttagttatt
     1381 ccacttttat tgttattgtt gggttattta tcagaaaatg accacggagg gacagataat
     1441 gaagctaatc aagctgaatc atgcagtacg agtgaggttt aatccttata taataacctc
     1501 taaaagattg tttttgagca gagtcggaat ggatttattt ttaggaatgt tattgataaa
     1561 cacttgggtt tctccatact caattcctat taaatcagtg ctttcattga tatttattgg
     1621 aataatttgt tctattgaaa aattttttaa gtctgttttt atatcaaaaa ttcaaaatat
     1681 actgtatgtt agagaatctc tatttgatat gctgattggt ctaaatttat acgaagaaag
     1741 tgataatgta gtaaccaata gtgcaacatt aaactttgaa atcttgccca ataatattgt
     1801 aatggtcgaa gtaccattgt ttgggaataa gtttttaaaa cttcttaaaa acctagacga
     1861 gtatcttata ccaacattag gactgcctct aatatcaaaa caagaattcc ctgattatgt
     1921 tatttataga ctcggtaaca tagaagaaat tcaacagtat gttttcaata gccatacatt
     1981 gactaaagaa ttttttgaag atattcctag tccaataatc aagctatcaa atactcagca
     2041 atttagtcta aaatcaaata ctaatctcgg gatttacggt cgaacaggaa cagggaagac
     2101 aatagctcta caatggtact tatttaatgc actggctaaa ggttgtggca ctactgacca
     2161 tacttatttg ggagtggttg atggtaaggg cgctgattta tttgcccttg gtaaacttct
     2221 tcaagaagaa ttaggggagc aaatagcagt aggctcttca cctcaaatgt tagcaaaatt
     2281 atcaagagaa tttgttgata ttatgaatga gcgttttgaa attattgagc gaaacagcac
     2341 actaaatgca gatgcctatg acttagaaat gacaccaaac tttctatttg ttgatgaact
     2401 cgcttctatt cgtgatagtt gtggttctag taaacaaggt aaagagctat ggaatgaaat
     2461 tctgcaaaac ttaggcttga ttgcacgcaa aggacggcag gcaggttgcc acctctgcct
     2521 tagtacccaa gacccaaatg cagagaatat tcctgttgaa cttagaaacc aaatatcagc
     2581 agttttatac cttggaaata taggggacga ccgattgaaa atggctttta gtatgtgtga
     2641 actggaaaat gttcctacaa tttcagatag aaaaggcgaa gcactctttt atgctgacgg
     2701 tttaaattct gctgagcctg tacttactat cgtcccgttc gtcgatgtta aaacaaaaca
     2761 agatttttta caggtagtta gaaatatact gccaaactac taatgacggt ctttcggact
     2821 agagaaatag ggacgattgc ccagggggca gaatcgagcg gagcgttcct cttttcgcta
     2881 gtccgaaaga gcccaccgac tgctttcttt gcaggaggtc ggaaaaatac cccagtacta
     2941 atagggggtg cacacataca tgaaatgtac tctaaaccct tgatacgtaa ggggttacgg
     3001 cttgttggtt ataccgaagt cattgaaacc cttgtgggag aagggattga gtcgcttttc
     3061 gtgtaggata cgactttttg aatagaaaat ggagtaatta ttatgactta caatatgaca
     3121 gatactaccc ttaagattgg gcaacttgat ttggatatga cacagtttga agtgccgaaa
     3181 aaaattgtta ttctatctgc taaagtaaat aataggtata acgaggttaa tggcgagaaa
     3241 atcaaaactg aagaagttac gaaaatcact tgtactgccc ttgatgccga taaagtgaaa
     3301 gttctaactg aaatgggaat ttctactgat gacttgaaag ctatcaacct agaaattgta
     3361 ggtaatgtag ataaggttgc tacgctcgct caaaatgaat cacttttgaa tgttccgatt
     3421 gagttggtta agccgaaagt tcgtttagct tggaacatgg cacgaagtaa ctgggcaggt
     3481 gttaaattag tatgtgagga cattaaaatt ctaggagcat aaccctatga atacagtcag
     3541 aattgattat tttgcagtaa ccgttaaaaa tatttctcca gaaagtgttt taactgatat
     3601 tcttttaatt cctttagaag atttcacatt aaataattgg ggaataaaca agtaccagcg
     3661 acattatgct tgttctgaga ttaaagtgta ctttaatgag gatagaactt caatgggggt
     3721 ttttatcgaa ttaaaagggc aaggttgtcg ccaatatgaa gaatttttgg acggtaacga
     3781 aaataattgg atagctttga taggtcggtt gtatcagtat tcggttaatt ttactcgctt
     3841 agatattgct cacgacatat ttgacggtag tttagatgtt cagcgagtat atgactattg
     3901 caagaaaggt ttatgtatct cgaaagcaaa gcattttgag tatcatgaga aatctgtctt
     3961 agaaaatgga gaacgagttg gagagacggt tgctataggt tccagaggta atcaacaatg
     4021 gtgtatctac aataaacgta tggaacaact tagcaagcaa gagcttgtag aatatccctc
     4081 atggattcgt gcggaactta gatgttggca ggataaggcg aatattattg cagagcaatt
     4141 gtttctaaag cgtcctctgt catctatcta ttttgaagct atcaatggtc actatcgttt
     4201 tgtgaaacca aatgcgacag atactaatcg ttggagaaga aaaaaggtca agtggtggct
     4261 agactatcta aagaccgaaa atcagactgt tttgagcgtt gagagaacta agcctacatt
     4321 acggcagtca gaggcttgga cagagaaaca agttgcgaag acattggcaa aagtctatac
     4381 agcaaaatat caagcctatg atgttcaaaa ggcagaggac tacattcaag gtctactaaa
     4441 agagggcttg tcaaggctaa ctgataatga tgaaaaggat atagagcaat atattcgaga
     4501 gcagaatagt tctcccttat ggggacaaaa aaagacgact tgaaaacaag tcgcctctaa
     4561 aaattaacta actagattat aacaaaagaa aggaaagtgt ccaatgatag caaccgtaaa
     4621 taagaatgac ctagttgccc ttggtttctc tgaaggaact tctaaacgta tcatcagaca
     4681 ggggaaagag cttctaatag caagaggatt tagggtttat caaaataagc gtgtcggaac
     4741 tatccctgct tctatcgcta ctgaattact tggttttgac gtttctttag gtgctcatca
     4801 tgacagttaa gaaagcaaaa aatggaactt ggactgttga tatttctgac ggcttccacc
     4861 cagttaccaa aaagcggata cgaatcattc gtaaaggttt caagacaaag aaagaagctt
     4921 tagagttaga acaatatatc cgtgttgttg agttaaaaga aaaacgtttt gattttttgg
     4981 taacaaccga tatgctcttc gatatacttg aggaagaaga ccgacaaaat aacagaaaaa
     5041 tcagttatat cagcacacaa agaaacaact atgagcgaca tatcaaacct tacttcataa
     5101 atacaaactt aaataaatta tcttatgagc acatttttga atttcgagag tatctcaaaa
     5161 taaagcccaa aaagcaaaac gatagctcta cgttaagtca taatacagtc aataaaataa
     5221 tgatactcct caaaaagatt tttgatactg gtgtaagaaa gtcattgata gataaaaatc
     5281 cagttgaaaa tataagaaaa ttgcctatta gtaagccaac tataaatttt tggaatgtag
     5341 aagaatttaa cgaatttaga aaacttatta caagtgatga aataagttac gacctattct
     5401 ttacgattgc cttttttact ggcatgcgat tgggcgagat agttgcgtta acttggtacg
     5461 atataaactt aatcactaat agcattcaca tcacaaaaac agcatatttt gttaacggta
     5521 caaatcatat caatagtaca aaaactagag caggtaccag acgtattaca atcaatcata
     5581 aattagcaag aatgcttgca gactggaaag aaaaacaaaa agacttactt aaagaattta
     5641 caacagatac agaaaacctt caagtgattc aaagcacacc actaccaatg acaaaaaata
     5701 tgattgataa aaaatttaag cagatactgg ctaggaacga ctatctaaaa aagatacgaa
     5761 tacacgattt aaggcactct cacgcgtctt tacttatcaa tcaaggggaa gattatctag
     5821 tcgtaaaaga acgtcttgga cacgcctcta tcacgactac aatagataca tattcccact
     5881 tataccctag taaacaaaag acattggcga acaaattgga cgatattttt tagaaaatgg
     5941 aattttttgg caacttgaaa aagagcaata gaaaagataa aacaaaagac aaggcttaga
     6001 aaccttgtct ttataactat accggcggcc ggggtcgaac cggcacgtcc ttgcggacac
     6061 tggattttga gtccagcgcg tctgccaatt ccgccacgcc ggcatatagt tgaactgggg
     6121 tagctggatt cgaaccaacg catgagggag tcaaagtccc ttgccttacc gcttggcgat
     6181 accccaatat taaaataggc gagtgagggg aatcgaaccc ccgaatgtca gagccacaat
     6241 ctgatgtgtt aaccacttca ccacacccgc catataacac gggcagtagg aattgaaccc
     6301 acactgaagg ttttggagac cttagttcta cctttaaact atgcccgtaa aggtatggag
     6361 agagagggat tcgaaccccc gaacccgaag gagcggattt acagtccgcc gcgtttagcc
     6421 tcttcgctat ctctccgaaa tacaat
//
LOCUS       DASFQD010000119         6434 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.120, whole genome shotgun sequence.
ACCESSION   DASFQD010000119 DASFQD010000000
VERSION     DASFQD010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6434
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.120"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(96..605)
                     /locus_tag="U1021_001895"
     CDS             complement(96..605)
                     /locus_tag="U1021_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HEM4712395.1"
                     /translation="MERVKRKESLFVESVVEALWELLEDKSFEKISVSELVERAGIGR
                     VTFYRNFSNKEEVLERSFNLELQAWLTERQIDLSDWSDAHLLLALRQFFDFWYEQQDK
                     IRLLTANHLDYLLEEVLDRYFKERLGDMTDDFHLQFIVGGFFRVLKTWVARGCKESPD
                     DIMRLMGEQ"
     gene            749..1498
                     /locus_tag="U1021_001896"
                     /pseudo
     CDS             749..1498
                     /locus_tag="U1021_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646452.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pectin acetylesterase"
     gene            complement(1512..2562)
                     /locus_tag="U1021_001897"
     CDS             complement(join(1512..2120,2122..2562))
                     /locus_tag="U1021_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612110.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEM4712396.1"
                     /translation="MRNLFTRDNLKELKAALKNQAYAPYHRRLQAILLRSEGFSFQKI
                     SDLTGYVPQTVKNQVDKYFKEGLSAVVTETRGGRHRSYLTVEEEQAFFKKILDSSIDA
                     GEMVTTTSLFDAYQEEIGQEVPRQTFYALLKRHGWRKVTPRPEHPRKQMLKQLLRLKI
                     KYTFRTAGKRFKHSRRYNKVRLMYQDEAGFGRISKQGKCWAPQGTRPVVHSRHIREYR
                     YCYGAVDAHTGESFFLIAGACNTAWMNEFLKQLSLIYADDYIVLVMDNAIWHKSRALE
                     VPPNIEFAFIPPYTPEMNPIEQVWAEIRKRGFKNKAFKTLEEVIDKLQEVILSLHWSV
                     LKSIVNRRWTRDVYF"
     gene            2602..2973
                     /locus_tag="U1021_001898"
                     /pseudo
     CDS             2602..2973
                     /locus_tag="U1021_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730134.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pectin acetylesterase"
     gene            2983..4002
                     /locus_tag="U1021_001899"
     CDS             2983..4002
                     /locus_tag="U1021_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM4712397.1"
                     /translation="MKKFKKIILWILGIVASLGIIAYVSVTNHPQLMVGVIQSFMYKE
                     SSPNSYSPLYAPIDGLKENGQYLKSEIAYSKDYPNSFLDITYPDQNFEVDRPILFYFH
                     GGGFFGGSKNMGDPLAASQATYLIDDIVSKGYNVVNVDYALVPDYHFPTPVIQMNQAI
                     AYMKEHAEEYHLNMDNVVLMGSSAGAIMVAQYGSVLANQEYAQLLNIEPSIAKEHVKA
                     LVIDDAPLDYANFSLSTKILVGNYVSETIYLSEEEINDYNPISHVNKDYPASFLLGSE
                     YRTDMVSLNKALKQAGVENELVDPLAEEGLEKPHGFVANLRTDPVSAKAFERLITFIN
                     DRTKE"
     gene            4224..5507
                     /locus_tag="U1021_001900"
     CDS             4224..5507
                     /locus_tag="U1021_001900"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016466710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEM4712398.1"
                     /translation="MSVSFEAKETNRGVLTFTIGQDAIKPELDRVFNKVKKDINLPGF
                     RKGHLPRAVFNQKFGEEALYQDVVNALLPAAYEAAVTEAGLEVVAQPKIDVVSMEKGQ
                     DWTITAEVVTKPEVKLGDYKNLAVSVEATKEVTDEEVDAKIEAARNNLAELVIKEGPA
                     AEGDTVVIDFVGSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHAAGEEVNVEVT
                     FPEDYQVADLAGKPALFVTKIHEVKAKEVPALDDELAKDIDEEVETLDELKAKYRKEL
                     EASKEVAFDDAVESAALELAVENAEIVELPEEMIHEEVHRAINEFLGGMQQQGISPDM
                     YFQITGTTRDDLHKQYEADAEKRTKTNLVVEAVAKAEGFEATEEEINREIEDLAATYN
                     MEVAQVRSLLSPEMLKHDIAVKKAVEVITSTVTVK"
BASE COUNT         1980 a         1277 c         1359 g         1818 t
ORIGIN      
        1 cctcactata cacaaaaaga cttagagtga ctgaaaaaca gttgtctaag tctttttgct
       61 tgcttgggct ggtcaagaat gttgataagc ttgccctatt gctctcccat caaccgcatg
      121 atgtcatcag ggctttcctt acagcctcta gcaacccagg ttttcagcac tcggaaaaat
      181 cctcccacaa taaattgcag gtgaaaatca tcggtcatgt cccccagtct ttctttgaaa
      241 tagcgatcca agacctcctc gagcaagtag tccaaatggt tggctgtcaa taagcgaatc
      301 ttatcctgtt gctcatacca aaagtcaaaa aattgccgta aagctagtaa gaggtgagca
      361 tctgaccaat ccgacaagtc aatctgccgc tcggtcaacc aggcttgcaa ttccaagttg
      421 aaggaccgtt cgagaacctc ttccttatta gaaaagttcc tataaaaagt cactcgaccg
      481 ataccggctc gctccaccaa ctcagacaca ctaatctttt caaaggattt gtcttctagc
      541 aactcccaca gagcctccac gacactctcc acaaataacg actctttccg cttcactctt
      601 tccatgcgaa acgcttcctt tcctttgttt ccttttgggc aaatagcaga gctgggacta
      661 gttttcccac tgttcatctg ctatactaat aaaaaaacga aacacctgtt tctaaaaaat
      721 ataccataaa ggacagaaaa aagaaagtat gaaaaaagtt tggaaaatag tatcagctgt
      781 agtagtcgcc ttagctttgc ttggttttat tgcctataaa atgacctttg gttggtccgc
      841 tccagagctt gttcatcaaa ccccacaagt gaatgaatgg caccgcctca gtcccgaagg
      901 ggttgtagat tctcagggca atcaggcaca cggcctgctt cgtatcggta aagagaagaa
      961 taaggtgatg gtctatttct ttggtggtgg tgtgagtatc aatgaagaga ctgctagtgg
     1021 tggcacacgc tattttgcga ccacaactgg ccatcaagat tatgtcgcaa cttggggaat
     1081 tggaagtccg caggaagaca atccatttaa ggactggact atgattgtgc ttccgtatgg
     1141 gacaggagat tttcatgctg gcacacagaa ttttacttac gtagatgata aaggtaagga
     1201 acaaacgatt tatcatcagg gttataataa tttgtcaagt atattagcag cagctaaacc
     1261 gcacgttggc aatcccgata cacttctggt gactggattt tcagctggcg gatttgcgac
     1321 ctcactgcta gcggatgatg tcatttctca ttttccaaca gcgaaaaatg tcacagttgc
     1381 agtggacagt tcctttttga gacatgataa ctggaaaagt attgcggaaa atgtctggaa
     1441 aacgccgact tctattagtg accgcctgca ttcagataat attgttttag atagcttata
     1501 ctaattaaaa atcaaaaata gacatcccta gtccatcgtc tattaacaat agactttaat
     1561 accgaccaat gcaaactaag tatgacttcc tgtagcttat caatcacctc ttctaatgtc
     1621 ttgaaagcct tgtttttaaa tccacgtttg cgaatttcag cccagacttg ctcaatggga
     1681 ttcatctcgg gagtatacgg agggataaaa gcgaattcga tattcggtgg aacttctaac
     1741 gctctagact tgtgccaaat agcgttgtcc attactaaaa caatatagtc atcagcataa
     1801 attaaagaaa gttgctttag gaactcattc atccaggctg tattgcaggc gccagcaatt
     1861 aaaaagaaag attcgccagt atgagcatcc acggcaccat aacaatatcg gtattctctg
     1921 atatggcgac tgtgtacgac aggacgagtt ccttgtggag cccagcattt cccctgcttg
     1981 ctaatccgtc caaaccctgc ttcgtcctga tacatcagtc ttactttatt atagcgacgg
     2041 ctgtgtttga agcgctttcc tgctgtcctg aatgtatatt ttatttttag acgcaacaat
     2101 tgtttgagca tctgctttct gtggatgttc tggacgtgga gtcactttac gccaaccatg
     2161 gcgcttaaga agggcataaa aggtttgacg tggcacttct tgaccaattt cctcttgata
     2221 tgcatcaaag agcgaggtag tcgtcaccat ctccccagcg tctattgaac tgtctagaat
     2281 tttcttgaaa aaagcctgtt cttcttccac agttagataa ctacggtgtc tcccacctcg
     2341 agtttctgtg acaacagcag ataacccctc tttgaaatac ttatcgacct gattttttac
     2401 agtctggggt acatatcctg ttaaatcgct aattttttga aaggaaaaac cttctgaacg
     2461 taaaagaatg gcttgaagcc gacgatgata cggcgcataa gcttgatttt ttagggctgc
     2521 ttttaactct tttaggttat ctcgtgtaaa taagtttctc atgattctat tatatcatct
     2581 atttttggtt ttgtgtaagt attagtagcc ctccatgaga aacgcgggga tagtgttaag
     2641 atattgtttg atatttccta tcgagatgga attcttcagc aatatcaagc ctatattgac
     2701 caagggaaac tagcagatgc aacagaagag agcagtgagc actttcaaaa agaacttaaa
     2761 aaaatgattc aagaactaca atctcagatt gatggcgtgg gtatttttgt ctggaattac
     2821 gggcaagatg aaaaaactac cgctactcag cacaccacca ttaacttctc aacattcttt
     2881 acccctatgt ctcaagacaa gagtgtggca gaatggctgg atgatgcggt taacggagag
     2941 gtaaagagtt acgggttaga actattagat taggagaata gcttgaaaaa atttaaaaaa
     3001 atcatcttat ggatccttgg gattgtagct agtctcggta tcattgctta tgtgtcggtt
     3061 accaatcatc cgcagttgat ggtcggtgtc attcaatcgt ttatgtacaa ggaaagttca
     3121 ccgaactctt acagtcctct ttatgccccc attgatggtc tgaaagagaa tggtcagtat
     3181 ttgaaaagtg agattgccta tagcaaggac tatcctaaca gctttttaga tattacctat
     3241 ccagaccaaa attttgaagt tgaccgtcca atcctcttct atttccacgg tggtggattc
     3301 tttggaggga gtaaaaatat gggtgaccca ctggctgcca gccaagcgac ctatctcatt
     3361 gacgatatcg tgtcaaaagg ttacaacgtt gttaatgttg actacgcttt ggtgcccgat
     3421 taccattttc caacacctgt gattcaaatg aatcaggcta tcgcctacat gaaggaacat
     3481 gccgaagaat atcacttgaa catggataat gttgtcttga tgggttcatc agcgggtgcc
     3541 atcatggttg ctcaatatgg tagtgtctta gccaatcagg agtacgctca gctattgaac
     3601 attgaaccaa gtattgcaaa agaacatgtc aaggctctgg ttatcgacga tgctccctta
     3661 gattatgcca attttagctt aagcacgaag attttggttg gaaattatgt ttcagaaacc
     3721 atttatctaa gtgaggaaga aatcaatgac tataacccga tttcccatgt gaacaaggac
     3781 tacccagcta gtttccttct gggaagcgag tatcggacag atatggtgtc gctcaataag
     3841 gccttgaagc aagcgggagt tgaaaatgaa ttggtcgatc ctttggcaga agaagggctt
     3901 gaaaagccac atggttttgt ggcgaatttg cgaacagacc ctgtgtctgc caaagcattt
     3961 gaacggttga ttacttttat aaacgataga accaaggaat agtcggagta ttgataagtt
     4021 ggaaactgat ggggatttgt ccaatcaatc tgccgctctg acaaccatgt ttgtactcag
     4081 aaagtctacg ccgaaaaatt ccaaatgaga acaataagtc ccagctctgc catttcccaa
     4141 aagtccgtta taaaatcgtt gaaatccttg tcaattgtgt tataatgaag agtatgcaat
     4201 aaaattttaa ggagaatgac agaatgtctg tatcatttga agcaaaagaa acaaaccgcg
     4261 gcgttttgac tttcacaatc ggtcaagatg ccatcaaacc agaattggac cgcgttttca
     4321 acaaagttaa gaaagatatc aatcttccag gtttccgtaa aggtcacttg ccacgtgccg
     4381 ttttcaacca aaaatttggt gaagaagcac tttatcaaga tgttgtaaat gcattgttac
     4441 cagcagctta tgaagcagcg gttacagaag ctggtcttga agtagttgca caaccaaaaa
     4501 tcgacgttgt gtctatggaa aaaggtcaag actggacaat cactgcggaa gttgtgacaa
     4561 aacctgaagt aaaattgggt gactacaaaa acttggcagt ttcagtagaa gctactaaag
     4621 aagtaacaga tgaagaagtt gatgcaaaaa tcgaagctgc acgcaacaac ttggctgaat
     4681 tggttatcaa agaaggacca gcagctgaag gcgacacagt tgttatcgac tttgtaggtt
     4741 caatcgacgg cgttgaattt gacggcggta aaggtgagaa cttctcactt ggacttggtt
     4801 caggtcaatt catcccaggt tttgaagacc aattggtagg tcacgcagct ggtgaagaag
     4861 tgaacgttga agtgactttc ccagaagact accaagtagc tgaccttgct ggtaaaccag
     4921 ctctcttcgt gacaaaaatc cacgaagtaa aagcaaaaga agtaccagct ttggatgacg
     4981 aattggcaaa agacatcgac gaagaagtag aaacacttga tgagttgaaa gctaaatacc
     5041 gcaaagaatt ggaagcatca aaagaagttg cctttgacga tgcagttgaa tcagcagctc
     5101 ttgaattagc tgtagaaaac gctgaaatcg ttgaattgcc agaagaaatg atccacgaag
     5161 aagttcaccg tgcaatcaat gaattcttgg gtggtatgca acaacaaggt atctcaccag
     5221 atatgtactt ccaaatcact ggtacaactc gtgatgacct tcataaacaa tacgaagcgg
     5281 atgctgaaaa acgtactaag actaacttgg ttgttgaagc agtagcgaaa gcagaaggtt
     5341 tcgaagcaac tgaagaggaa atcaacagag aaatcgaaga cttggcagca acttacaaca
     5401 tggaagtggc acaagttcgt agcttgcttt caccagaaat gcttaaacac gacatcgctg
     5461 tgaagaaagc tgtagaagtg atcacaagca ctgtaactgt aaaataacta tttggacaac
     5521 tcgactctag tcgggttttt tgtttaatca tctttttaat gcgatgtgct gagatgttga
     5581 cacgaactct gagaagcgaa gtcggacttt ttgcctaact tcgttgtaat cgtttttctt
     5641 ttgtttgttt ttgctttgag aaggggcaag taatggtttg taaaaccacg ccaaacgcat
     5701 gaagaaaaaa tcgttttcag aaaacgaaaa tcataaccaa acctcaatca aagtagtaca
     5761 ctagaataga ggtgaactac aatgattgat tttcttttat ccatagaaga gcacaaagaa
     5821 gagtatgata gccgtcaagc atggaaaatc cgctatcctt tatctactat cgtaatggtc
     5881 agatttggag tgtaaaacac gaattgctga gatttgcttc gcaaatctta tctccaacct
     5941 ttaacagtcc actggactgt taaacccaat caaccactgc gctgagatgt tgacacgaac
     6001 tctgagaagc gaggatggac tttctgccca gcctccttac gtcgaagtaa taaaagaaaa
     6061 actaaatgac gatattttat aatttcacac agaggtagtc tttggtaagg gttatcttac
     6121 atattgtcta taactaaaca ttggcaagtc atcatcttga tttaccaatt cattcacttg
     6181 agcttaaaga agactttgtg cttttattgt gtgagaatgt gtcatctctt caaagttttg
     6241 cttgatgtgg tgcaaggtat ttcaaaagaa aaagttgtat aaattggcag ttttagaaca
     6301 agataaaagt aagttgttaa ggatattagc caagttgtca tagtattaac ttgaatgaag
     6361 ttcggtgaaa gtttttagat gtcgctggag gagaagttta tagctaggga tacaaatccc
     6421 cttttcgcgg atag
//
LOCUS       DASFQD010000120         6268 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.121, whole genome shotgun sequence.
ACCESSION   DASFQD010000120 DASFQD010000000
VERSION     DASFQD010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6268)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6268)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6268
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.121"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..204)
                     /locus_tag="U1021_001901"
     CDS             complement(<1..204)
                     /locus_tag="U1021_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HEM4712399.1"
                     /translation="MKQTLKLKNLSCQNCVKHVTNHLLDLDGVEEVKIQLEEQLAEVE
                     TSVAYDLEQYQEVLDDTIYEVEEL"
     gene            complement(439..909)
                     /locus_tag="U1021_001902"
     CDS             complement(439..909)
                     /locus_tag="U1021_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopY/TcrY family copper transport repressor"
                     /protein_id="HEM4712400.1"
                     /translation="MEQTISAAEWQVMRVLWAHPGATSQEIIQALQEGFDWQATTIKT
                     LLGRLRKKNYLRMVKETSKYHYYPLISEEEHLQGQVELLLATICSTKQGQLVENLLDT
                     GTFSQKSLEHLASKIAQLQKTAPEQIACRCLSGQCTCGHHHTLRKSTSDVVDLI"
     gene            complement(1012..2523)
                     /locus_tag="U1021_001903"
     CDS             complement(1012..2523)
                     /locus_tag="U1021_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000724057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     AdcA"
                     /protein_id="HEM4712401.1"
                     /translation="MKKVGLLFLSVSALLLGACGNSTASEDGKLNIVTTFYPVYEFTK
                     QVAGDEANVDLLVKAGTEVHGYEPSAKDIARIQEADAFVYENENMETWVHDVEGSIDT
                     EKVNVISATEGMLLLPGGEEEHEGHDHSEEGHSHAYDPHVWLSPERAITLVENIRDSL
                     VAKYPEKKDAFETNAAAYIEKLDALDAKYSETLSAAKQKYFVTQHTAFAYLALDYGLK
                     QVSITGVAADEDPTPSRLAELTEYINKYGIKYIYFEENASKSVAETLAKETGVQLDVL
                     NPLESLTDEDMKNGKDYISVMEDNLTALEKTTSQEGSEILPEEGAETAQTVYNGYFED
                     SAVKDRTLSDYAGEWQSVYPYLLDGTLDQVWDYKAKIKGGMTAEEYKAYYDTGYKTDV
                     DQINITDNTMEFVVGDKKEKFTYKYVGYKILTYKKGNRGVRFLFEATDANAGNYKYVQ
                     FSDHNIAPVKTGHFHIYFGGESQEKLLEELENWPTYYPVGLTGLEIGQEMLAH"
     gene            complement(2533..3345)
                     /locus_tag="U1021_001904"
     CDS             complement(2533..3345)
                     /locus_tag="U1021_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEM4712402.1"
                     /translation="MFDLSVFHYDFMQRAFLAIIAMSLFSPILGVFLILRRQSLMSDT
                     LSHVSLAGVAFGLVLGISPTLSTVLVVIVAAVFLEYLRTIYKNFMEIGTAILMSTGLA
                     ISLIVMNKSGGKSGLSLEQYLFGSIVTISQEQVIALFTIAVIVIVLTLLFLRPMYILT
                     FDEDTAFVDGLPVRAMSIAFNVVTGVAIALMIPAAGALLVSTIMVLPASIALRLGKSF
                     KAVIFTGMGIGFFGMVMGLLTSYYAETPASASITLIFISIFLLVNVVQKFKK"
     gene            complement(3338..4042)
                     /locus_tag="U1021_001905"
     CDS             complement(3338..4042)
                     /locus_tag="U1021_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEM4712403.1"
                     /translation="MRYITVEDLSFYYDKEPVLEHIHYYLDSGEFVTLTGENGAAKTT
                     LIKATLGILKPKQGKVSIAEKSIKGKKLRMAYLPQQIASFNAGFPSTVYEFVKSGRYP
                     RQGWFRRLTAHDEEHVRISLESVGMWEHRDKRLGALSGGQKQRAVIARMFASDPDIFI
                     LDEPTTGMDAGTKDAFYQLMHHSAKKHGKSVLMITHDPDELNKYADRNIHLVRDQQSP
                     WRCFNVHEADEEVAHV"
     gene            complement(4043..4486)
                     /locus_tag="U1021_001906"
     CDS             complement(4043..4486)
                     /locus_tag="U1021_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent MarR family transcriptional
                     regulator"
                     /protein_id="HEM4712404.1"
                     /translation="MNRIALEIEKYLHEIVLSSENQLEILVGSCQSTVKLTNTQEHIL
                     MLIEKAAYTNTEIAKELNVSQAAITKATKSLVAQGLLVAVRDDKDARIVRFSLTEAAK
                     PIAAEHAHHHAHTLEAYEELLEHYSLEEQESIARFLSELVEKIRK"
     gene            4683..5226
                     /locus_tag="U1021_001907"
                     /pseudo
     CDS             4683..5226
                     /locus_tag="U1021_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377895.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
     gene            complement(5223..6005)
                     /locus_tag="U1021_001908"
     CDS             complement(5223..6005)
                     /locus_tag="U1021_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2971 domain-containing protein"
                     /protein_id="HEM4712405.1"
                     /translation="MKTLYHYTTVETLLLILNYKTLRFKSLLYVDDLLEPSTSDFGNL
                     GGFKYVSCWTDTPNSIPQWTIYSDNMTGVCIGISFDKETDVFLTEKFSLSEYSVPIDM
                     LNALHPLKLGLLVTNNKYVPSLEQIRYTDDVSLITPRVVSSDDKSITINLASSGIYKT
                     TDWSFQNEQRFSFQIFPLPIDLVLELMNANKGDLTEIINSFISVKPKEYFDLDLNLTI
                     FSNMTITFGKRCFAEDKLKVSKFLEDNKFHIPLFDSTVNIKS"
BASE COUNT         2055 a         1432 c          998 g         1783 t
ORIGIN      
        1 caactcttcc acttcataaa tagtatcatc cagcacctct tggtactgtt ctaagtcata
       61 ggctacagag gtttccacct ccgccaactg ctcttccagc tggattttca cctcttccac
      121 cccatccaag tccaagaggt gattggtcac atgcttgaca cagttttggc acgataagtt
      181 tttcaatttc aaagtttgct tcatgttctt tctccttttt tatactcaat gaaaatcaga
      241 ttcagactag cttcaaaggt tcggggaacc tttgaaggtt ggaaataaag cgaacttgtt
      301 cgctacaaaa aggttcgggg aacctttgga ggttggaaat agagcgaacg tcttcgtttc
      361 tccaagagca gatagaaccc tactactttc gcattttcag gtagtaggct gtaaagctcc
      421 acaggagctt tacactcatc aaatcaagtc aacaacgtct gaggttgatt ttcgaagagt
      481 atgatgatgc ccacaggtac attgccccga caagcaccga caagcgattt gctcaggtgc
      541 agtcttttgt agttgggcta ttttactagc tagatgttca aggctttttt gggaaaatgt
      601 ccctgtgtct agcaagtttt caaccagttg cccctgtttt gtggagcaga tggtagctag
      661 taagagctcc acctgcccct gcaaatgctc ctcctcactg atgagaggat aatagtggta
      721 cttgctggtt tccttgacca ttctcaaata gtttttcttc cgcagacgac ctaaaagggt
      781 cttaatagtc gtcgcctgcc agtcaaaacc ttcctgcaag gcctgaataa tttcctgaga
      841 agttgcacca ggatgggccc acaggacccg catgacctgc cactccgcag cagaaattgt
      901 ctgctccaca cattcacctc ccaacaataa ttttctaatt ttagtttaca tttgtagtca
      961 aaaattgtca agaagaaaga ctgaacacct tgcccagtct tctcattatt cttagtgagc
     1021 cagcatctcc tgaccaattt ccaaaccagt caaaccaaca gggtagtatg tcggccagtt
     1081 ttccaactct tccaagagtt tttcttggct ctctccacca aaatagatat ggaagtgacc
     1141 tgttttaaca ggggcgatat tgtggtcgct aaattgaaca tacttatagt taccagcatt
     1201 tgcatccgtt gcttcaaaca agaaacgaac accacgattt ccttttttgt aggtcaaaat
     1261 cttatagccc acatacttat acgtgaattt ttctttctta tctcccacta caaattccat
     1321 ggtattatct gtaatgttaa tttgatcaac atctgttttg tagccagtat cgtaataagc
     1381 cttgtactct tcagctgtca taccaccttt gatcttagcc ttgtaatccc agacctgatc
     1441 tagtgtacca tcaagcaagt atggataaac agattgccac tcacctgcat aatctgaaag
     1501 agtacgatct tttacggcac tatcttcaaa ataaccgtta taaacagttt gcgcagtctc
     1561 agcaccttct tctggcaaaa tttcagaacc ttcttgggaa gttgtttttt caagggcagt
     1621 cagattatct tccataacag aaatataatc cttaccattt ttcatatcct catccgtcaa
     1681 actttcaaga ggattaagaa cgtccaactg aaccccagtc tctttggcaa gtgtttctgc
     1741 aacagatttt gacgcatttt cttcaaaata gatatactta ataccatatt tattaatata
     1801 ctctgtcaat tctgctagac gtgatggagt tggatcctca tccgcagcaa cacctgtaat
     1861 agaaacttgt ttcaaaccat agtccaaagc caaatatgca aatgcagtat gttgtgtaac
     1921 aaagtatttc tgtttcgcag cagataatgt ttcagaatat ttagcatcca aagcatctaa
     1981 tttctcaata taggctgccg catttgtttc aaaagcatct ttcttttctg ggtatttagc
     2041 taccaaacta tcacgaatat tttctacaag tgtgatggca cgctcaggag acaaccatac
     2101 atgcggatca taagcatggc tatgcccctc ctcactatgg tcgtgacctt catgttcctc
     2161 ctcaccacca ggcaaaagca acatcccctc cgtcgcactg ataacattta ctttttcagt
     2221 atcaatcgaa ccttctacat catggaccca tgtttccata ttttcatttt cataaacaaa
     2281 agcatctgcc tcttggatac gagcaatatc tttagctgac ggctcataac catgaacctc
     2341 tgtcccagcc ttaaccaaca gatcaacatt tgcctcatca cctgccacct gcttggtaaa
     2401 ctcataaaca ggataaaagg tcgttacaat attcaacttc ccatcttcag aagctgtgct
     2461 attgccacaa gcccccaaaa gcaaagctga gacagacaag aataataaac caactttttt
     2521 catcttaact ccttattttt taaatttttg aacaacattc accagtaaga aaatactaat
     2581 gaaaatcaag gtaatacttg cactcgctgg ggtttctgca tagtaagaag tcagcaaccc
     2641 catgaccatt ccaaaaaagc caatgcccat cccagtaaag ataacagctt taaaactctt
     2701 accaagtcgc aatgcaatag aagcaggcaa aaccataatt gttgaaacca gcaaagcacc
     2761 tgccgcagga atcattaagg caatggcaac accagtcacc acattgaagg caatggacat
     2821 agctcgcaca ggcaacccat ctacaaatgc cgtatcctcg tcaaaggtaa gaatatacat
     2881 cggacgtaaa aacaacaatg tcagcacgat gacaatcaca gcaatcgtaa acaaagcaat
     2941 tacctgctcc tgactaatgg tcacaatcga accaaacaga tattgttcca gactaagccc
     3001 tgatttcccg ccagatttat tcatgacaat gagcgaaata gccaaaccag tcgacatgag
     3061 gatagccgtc ccaatttcca taaaattctt gtaaattgtc cgcaaatact ctaaaaatac
     3121 agctgccaca ataacgacaa gaacagtcga aagcgtcggt gaaatcccca ataccaaacc
     3181 aaatgcaacc cccgccaacg aaacatgact aagagtatcc gacatcaaac tctgccgtct
     3241 aagtatcaaa aagaccccca aaatgggcga gaacagactc atcgcaatga ttgccaggaa
     3301 agcacgctgc ataaagtcat aatgaaatac agatagatca aacatgggca acctcctcat
     3361 ccgcttcatg aacattgaaa caacgccaag gagactgctg atcacgaacc aagtgaatgt
     3421 ttcgatcagc atacttattc agctcatcag gatcatgagt tatcatcaaa accgactttc
     3481 catgcttctt agccgaatga tgcatgagct ggtaaaaagc atccttggtc cctgcatcca
     3541 tccctgttgt cggttcatcc agaataaaaa tatctggatc agaggcaaac atacgcgcaa
     3601 tgaccgcacg ctgcttctgc ccaccactca aagcacctaa gcgcttatcc cgatgttccc
     3661 acattccaac tgattccaaa ctaatccgaa catgttcctc atcatgggct gtcaaacgac
     3721 gaaaccaacc ttgtcgagga taacgcccgg attttacaaa ttcgtaaacc gtgctcggaa
     3781 aaccagcatt aaaacttgca atttgctgag gtaaataggc cattctcaac ttcttaccct
     3841 ttatactctt ctcagcaata gaaaccttcc cttgtttggg cttcaatatc cccaaagtcg
     3901 ccttaatgag ggttgtcttg gctgcgccat tctcaccagt caaagtcaca aattccccac
     3961 tatcaagata ataatgaata tgttctaaaa ccggttcttt gtcgtagtaa aacgacaagt
     4021 cttccacagt aatatatctc atctattttc taatcttctc cactaactca cttaagaatc
     4081 gagcaattga ctcctgctct tcaagactat aatgttccaa aagctcttca taagcttcca
     4141 aggtatgcgc gtgatgatga gcatgctctg cagcaatagg cttagcagcc tcagtcaaac
     4201 taaagcgaac aatacgagca tccttatcat ctctaaccgc caccaataac ccctgagcaa
     4261 ctaatgactt tgtagccttc gtgatcgcag cctgactaac attcaactcc ttagcaatct
     4321 cagtattagt atatgcagcc ttttcaataa gcatcaaaat atgctcctgc gtattcgtca
     4381 acttcaccgt gctttgacaa gaaccaacca aaatctccaa ttgattctcc gaactcaaaa
     4441 caatctcgtg caagtacttc tcaatttcta atgcaatacg attcataggc atccccttaa
     4501 ccttttaatt aacttgttaa gtataccaca tagaaaacaa aaaaacaagg aaaatatttg
     4561 aaagctaaat tcccaaagta agttctagtc tgactcgaaa actagaaact agactgagat
     4621 gaaaaaataa ggtagaactt gagaacaata aattaaagag tttagttgaa aatggtaaat
     4681 aaaaattact ctttacagtc ctatttttta taggtctaag acttagagaa gcactcgcac
     4741 taacacggca agatatcgac ctttcgagca atacaattca tatcacaaag tctgtatacg
     4801 ttaataaagg tataagccat atcagtgcaa cttaaactaa agcaggaact agaagaaata
     4861 tcatcaataa aaaattaagt caagaactgc aatattggta acagcaacaa aaacatctat
     4921 tagagcaatt tacaagtgat agcatgagcc tacaagtgtt tcaaagtagt cccattacga
     4981 ttacaaaaaa ttcaatagaa agcagtacaa aacaaattct tgaacgtgat gcggctctta
     5041 aaaagatacg catacacgat tttaagcact cacacgcttc tctattgata aatcgagggg
     5101 aaagattatt tagttgtgaa agaaaggcta ggacacgctt ctataacaac tacaatcgat
     5161 acctattctc actggtatcc aagcaagcaa aaagatttag ctgataaatt agatgaccta
     5221 atttaagact ttatatttac agtactatca aataaaggaa tatggaattt attatcctct
     5281 aaaaattttg atactttcaa cttatcttca gcaaagcatc ttttaccaaa cgtaattgtc
     5341 atattactga atatagtcag atttaaatct aaatcaaagt attctttagg tttaacagaa
     5401 ataaaactat taattatttc agtcaaatct cctttatttg cattcattaa ttccaaaact
     5461 aaatctattg gtaatggaaa aatttgaaaa gaaaatcttt gctcattttg aaaactccaa
     5521 tcagttgtct tatagatacc acttgaagct aaattaatag ttatggattt atcatctgaa
     5581 gaaactactc gaggagtgat caatgaaaca tcatccgtat accttatttg ttccaaagaa
     5641 ggcacatatt tattatttgt aactaataag cctaatttta aaggatgtaa tgcgtttaac
     5701 atatcaattg gtacagaata ttcagataaa gaaaattttt ccgttaaaaa gacatcagtt
     5761 tctttgtcaa aactaattcc tatacacact cctgtcatat tatcagaata gattgtccat
     5821 tgtggaatac tattaggagt atcagtccaa caagacacat acttgaatcc acctagatta
     5881 ccaaagtctg aagttgaagg ttctaataga tcatcaacat aaagtaaact tttgaatctc
     5941 aatgttttat aatttaatat cagaagcaat gtttcaactg ttgtataatg ataaagtgtc
     6001 ttcatataat ggctcctcct cttgcttata taacatacta tacaacaaaa cattaagtaa
     6061 tttttagtaa ctcaactgaa aattttatac cctcaaaaca aaaagacaag gcttagaaac
     6121 cttgtctttt aaactatacc ggcggccggg gtcgaaccgg cacgtccttg cggacactgg
     6181 attttgagtt tgaaaccaag gaacttataa ctgctcaaag cctattaaat cgccttttta
     6241 caatgttcat tctgtcgcaa aagtaaca
//
LOCUS       DASFQD010000121         6249 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.122, whole genome shotgun sequence.
ACCESSION   DASFQD010000121 DASFQD010000000
VERSION     DASFQD010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6249
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.122"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..279)
                     /locus_tag="U1021_001909"
     CDS             complement(<1..279)
                     /locus_tag="U1021_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM4712406.1"
                     /translation="MIFEKRKVPLMFFVGMVFLYFPFYYAQYSPNPTAVVLATILFAL
                     VYCSLFYTDHKLYSLLAWFYLIGYIAVMSFWGNLQFSLFIFNLSNMLGW"
     gene            complement(288..1019)
                     /locus_tag="U1021_001910"
     CDS             complement(288..1019)
                     /locus_tag="U1021_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4712407.1"
                     /translation="MKALLQVESIKLSRSLGVFLLSIGMPVVFFLIFSSTVQFDDVAM
                     QKAFIQSYMLTMTGFSMSGFALFTFPTMLAEDRKNSWLTFIQHSPLPIWHYYLSKLVR
                     VLLCFVSSNVIVFAVGGLVKGVEMTAQEWVISALLLLVTSIVFLAIGLLLVQIQSEQT
                     MSVVANLLYFVLAIMGGSWMPVSLFPDWVQRICKLMPSYHANQLVTIYAQEGDFLWKS
                     LLIVLGYAIIFLGIALVLNRKSEQQ"
     gene            complement(1016..1894)
                     /locus_tag="U1021_001911"
     CDS             complement(1016..1894)
                     /locus_tag="U1021_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712408.1"
                     /translation="MIEVQALEKIIKGRTILSNISFEIKSGECVALIGPNGAGKTTLM
                     SCLLGDRKATKGQVLLDGLAPQAQSNKEKVAVLPQENAIPTDLKVKELLRFFQAIYKD
                     SLTDVEIDSLLRFSPEQKNQLAGKLSGGQKRLLAFVICLIGKPKLLFLDEPTAGMDTS
                     TRQRFWEIVHELKDHGVTIFYTSHYIEEVEHTAERILVLHQGRLLRDTTPFAMRSEEQ
                     EKEVTLPIAFAAVVESLAEINEISYKQDTVSFKTRAIEQVWASLQEAGCRISDLEVQN
                     KTLLNSLFDKTREEEL"
     gene            complement(2149..2673)
                     /locus_tag="U1021_001912"
     CDS             complement(2149..2673)
                     /locus_tag="U1021_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HEM4712409.1"
                     /translation="MMKQKYYQSPAEITSFSPRQSVALADTKAVLNQAVADLSVAHSI
                     LHQVHWYMRGRGFMIWHPKMDEYMEEIDGFLDEMSERLITVGGAPFSTLKEFSENSQL
                     KEVPGDYNKTMEEQLERVVEVFRYLAALFQKGFDVSDEEGDSVTNDIFNVAKANIEKH
                     IWMLQAELGQAPKL"
     gene            2875..3087
                     /locus_tag="U1021_001913"
     CDS             2875..3087
                     /locus_tag="U1021_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HEM4712410.1"
                     /translation="MSEEKFDAKLEQLSGSAKEVIGKLTGDKEIEVEGLVEKGIGKAK
                     ELVEDAKDGLEGAINGIKNAFDKEEK"
     gene            3257..3685
                     /locus_tag="U1021_001914"
     CDS             3257..3685
                     /locus_tag="U1021_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HEM4712411.1"
                     /translation="MKKIVFVCLGNICRSPMAEFVMKDLTNQFHIESRATSNWEHGNP
                     IYPGTQKIFQKHKIPYDKTKTSQQISQADFEEFDVIIGMDGNNVRDLQKMAPAHAQNK
                     IFQFAEKSVPDPWYTGDFDETYEMVKKGCQDWLDRLQSFD"
     gene            3823..4245
                     /locus_tag="U1021_001915"
     CDS             3823..4245
                     /locus_tag="U1021_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712412.1"
                     /translation="MKEFKLPSIKWHDITSHFTRPKLEILSLIIILICALSVFTGRIA
                     SKQAITFNNGALQYNGYVVANKMNGQGKLTFDNGDVYEGQFKNGIFHGQGTYTSASGW
                     VYTGQFKNGYADGKGKLTTEGQAIYEGTFKQGIYQYEN"
     gene            4235..6034
                     /locus_tag="U1021_001916"
     CDS             4235..6034
                     /locus_tag="U1021_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEM4712413.1"
                     /translation="MKIKWLSVIRVIGLVFVLLYHFFIKYFPGGFVGVDLFFTLSGYL
                     TTALLIDEFAKHKKIDIVSFFRRRFYRILPPLVLTILLVLPLALLVRNDFIANIGNQI
                     AAALGFMTNFFEILSGGSYENQFSPHLFMHTWTLAIEVQYYLVWAGLVWYLTRISKSV
                     GQLRGSIFLTSISLFSLSFLAMSISSFFVDNFSTIYYSSFTHTFPFFLGSILATIAGI
                     GNTTTAFQQQVNTLTIKQAIGLFLGGLGVELLLLFTLQFSSIWTYLIGFLLSSLATAT
                     MIFAARVLHEKTEDVKEPAIILFFSSISYGIYLFHWPLLIIFTQLTNATIATGLSFVF
                     STILSTISFYILEPYIADKVGSLFGLAIDLKPYKKWLLSSFACLTIVGLGICLFAPKL
                     GSFEQESMVSNLYQAQTQLNTTRSAAENAKATSFEIQKGVIIFGDSVTVRASAAIQTA
                     LPDAQIDGTVSRNLSEIAKLINLYKQNNSLKETVVVALGTNTTDNYQELLDQLVKDFP
                     KGRRLIFVTPYDGNFPPSESISYQTGQYEKELAEKYDYISIADWYQVAKDNPPIWYNT
                     DLVHFNLESNGGEVFAQTIKNAVEAVADAPIKN"
BASE COUNT         1920 a         1334 c         1205 g         1790 t
ORIGIN      
        1 ccagcccagc atattggaca ggttgaagat aaagagggaa aattgcaaat taccccaaaa
       61 gctcatgacg gcgatatagc caatcaggta aaaccaagcc agcagggaat agagcttgtg
      121 gtcggtgtaa aagagggagc aatagaccaa ggcaaagaga atagtcgcta ggacaactgc
      181 cgtcggattg ggactatact gggcatagta aaagggaaaa tagagaaaga ccatgcccac
      241 gaagaacatg agtggtacct ttcttttttc aaatatcatc tgtcacctca ctgttgctcc
      301 gattttctat tcagaactag agcaattcct aagaaaatta tcgcatagcc taggacaatt
      361 agcaaggatt tccagagaaa atctccctct tgggcataga tggtcaccag ctggttggca
      421 tggtagctgg gcataagttt gcaaatccgc tgcacccagt ctggaaagag ggaaacaggc
      481 atccaggagc cacccatgat ggccagaaca aagtagagca agtttgccac aaccgacatg
      541 gtttgttccg actgaatttg caccaagagc aagccaatag ctagaaatac gatagaggtt
      601 actaaaagta agagagccga aattacccat tcttgagctg tcatctctac acccttaacc
      661 aagccaccga ccgcaaagac aatgacattg gaagatacaa agcagagcaa gacccgaacc
      721 agtttggaca ggtaatagtg ccagattggc aggggcgaat gctggataaa ggtcaaccag
      781 ctattttttc tgtcctctgc cagcatcgtt ggaaaggtga aaagggcaaa gcccgacatg
      841 gaaaaacctg tcatggtcag catataggac tggataaagg ccttttgcat ggccacatcg
      901 tcaaactgga ccgtcgatga gaaaatcagg aaaaagacga caggcatgcc gatagatagg
      961 agaaaaactc ccaaacttct ggataattta atgctttcta cttgcagcaa tgctttcata
     1021 attcttcctc ccttgtcttg tcaaataggc tattaagcag ggttttgttc tgaacctcta
     1081 ggtctgaaat ccgacaacct gcctcctgca agctagccca aacctgctca atagctcggg
     1141 tcttaaagct aaccgtgtct tgtttatagc taatctcatt gatttcagcc aagctctcca
     1201 ccaccgccgc aaaagcaatc ggcaatgtca cttctttttc ttgctcctca ctccgcatgg
     1261 caaatggcgt ggtatccctt agtaaccgcc cctggtgcaa aaccaaaatc cgctccgccg
     1321 tatgctccac ttcctcgata tagtggctgg tataaaaaat ggtcacacca tgatccttga
     1381 gctcatggac aatctcccaa aaacgctggc gggtcgaagt atccatgccc gccgtcggct
     1441 cgtccaagaa gagcagcttg ggcttgccaa tcagacagat gacgaaggcc aatagtcgct
     1501 tctgaccacc cgatagcttg ccggccagtt gatttttttg ctctggggaa aagcggagca
     1561 ggctgtcgat ttccacatct gtcagactat ccttgtagat agcttggaaa aagcggagca
     1621 attccttaac cttcaggtct gtcggaatgg cattttcttg tggtaagact gccacctttt
     1681 ccttattaga ctgagcctgt ggagccagac cgtccaacaa aacctggcct ttcgtcgcct
     1741 ttctatcccc caacaaacaa gacataagcg tcgttttccc ggccccgttt ggaccgatta
     1801 aagccacaca ttctcctgac ttgatttcaa aggaaatatt ggacaaaatt gtccgtcctt
     1861 tgatgatttt ttctagtgct tgtacttcta tcatttttct acctcctact tcttgaacat
     1921 cttacataca tagtatatct agaaaaggga agccctacta gaagactttg tcattgactc
     1981 atgtgacaaa tgtcatatta aactcaatga aaatcaaaag tagcttagaa aacgaagtcg
     2041 aagatagttc tggagttcat taaggcaggt tgacaacgga taatcttaat tttcaaagag
     2101 gattaaataa tgcagcaaaa aaagagtcct actggaccct tcatctgttt acaacttagg
     2161 agcttgacca agttctgcct gcagcatcca aatatgtttt tcaatattag ccttggctac
     2221 attgaaaatg tcgttggtta cactgtcacc ttcttcatca ctgacatcaa atcccttttg
     2281 gaaaagagca gctagatagc ggaacacctc taccacacgc tccaattgct cttccatcgt
     2341 tttattgtag tcaccaggaa cttccttaag ctgactattt tcactaaact ctttaagggt
     2401 agaaaatggt gccccaccta cggtgattaa acgctcactc atctcatcca aaaaaccatc
     2461 aatttcttcc atatattcat ccatctttgg atgccaaatc ataaaaccac gtccacgcat
     2521 ataccaatga acttgatgga ggatagaatg ggcaactgac aaatctgcta ctgcctgatt
     2581 caaaactgcc ttggtatcag ccaatgctac tgattgacgt gggctgaagg aagtaatttc
     2641 tgctggagat tgataatatt tttgtttcat catatatcat cctttctttt atttataatt
     2701 attataaata aaagaagaaa aaaatgcaag aattatccct catcctctga cttattggca
     2761 gacaaatccc ttgctatatt aacttatata cgatagacta gtaagtaaga atagtatgtg
     2821 attttctttt tagaaaatca tcgcccccat atgtgtatat caaggaggaa ttttatgtca
     2881 gaagaaaaat ttgacgcaaa actagaacaa ctatctggct ctgcaaaaga ggtaattggt
     2941 aagctgaccg gcgacaagga aatcgaagtt gaaggacttg ttgagaaagg aattggcaaa
     3001 gcaaaagagc tagtcgaaga tgcaaaagat gggcttgaag gtgccattaa cggcatcaaa
     3061 aatgctttcg acaaagaaga gaaataaaca aagagttcaa tatagatagg attggtcgtg
     3121 cattgtttga taatgaacat tacacttaat ttggtctttt acctatagcc cgaacaaaaa
     3181 tatacaagag aggggaactc agacatttac ctgtcgggtc taccttctct tttcttatgc
     3241 cacgaaagga gaatctatga aaaaaatcgt ttttgtctgt cttggaaata tttgtcgtag
     3301 ccctatggct gaatttgtca tgaaagattt gacaaatcaa tttcatattg aaagtcgtgc
     3361 tacttcaaac tgggagcatg gtaatcctat ctaccctgga acacagaaaa ttttccaaaa
     3421 gcacaagatt ccctatgata agaccaaaac ttctcaacaa atctctcaag cagactttga
     3481 ggaatttgat gttatcatcg gtatggacgg caataatgtc cgagatttac agaaaatggc
     3541 accagcacat gcacaaaata agatttttca attcgcagaa aaatccgtac cagacccttg
     3601 gtatactgga gattttgacg aaacctacga aatggtaaag aaaggttgtc aagactggtt
     3661 ggacaggtta cagtcatttg actaagaata agatttccta tgtaatgttt ttgtaatatt
     3721 tgtaaaaaaa tggtaaacta tttctgactg aactgataat ttcttactgt atcctagaaa
     3781 gaactgatta gcgtcggtca aatcttatga aagagtaaaa cgatgaaaga gttcaaatta
     3841 cctagtataa aatggcatga tataacaagt catttcaccc gtccaaaact tgaaatcctc
     3901 tcccttatta tcatcctcat ctgtgccctc tctgtattta cagggcgaat tgccagcaag
     3961 caagccataa ctttcaataa tggcgccctg cagtacaacg gttatgtggt cgcaaataaa
     4021 atgaatggtc aaggaaaatt gacctttgat aatggagatg tctacgaagg acaatttaaa
     4081 aatggaattt tccacggtca aggaacctac acatctgcaa gtgggtgggt ttataccggg
     4141 caatttaaaa acggctatgc cgatggaaaa ggaaaattga ccaccgaagg acaggctatc
     4201 tacgaaggaa cttttaaaca ggggatttat caatatgaaa attaaatggt tatctgttat
     4261 acgtgtgatt ggattagtct ttgtcctact ctatcatttc tttatcaaat atttcccagg
     4321 tggctttgtg ggggttgacc tcttctttac cctgtctgga tatttgacaa ctgccctttt
     4381 gattgatgag tttgcaaaac ataaaaaaat agatattgtc agctttttca gaagaaggtt
     4441 ctatcgcatt ctcccccctc tggttttaac gattcttttg gttcttccac ttgctctact
     4501 tgtccgcaat gatttcattg ccaatatcgg caatcagata gccgctgcgc tcggattcat
     4561 gacaaacttc tttgaaattc tatcaggtgg tagttacgag aatcaatttt cacctcatct
     4621 atttatgcat acttggacac tagccataga agttcagtat taccttgtct gggctggttt
     4681 agtttggtat ctgactcgca tctcaaaaag tgtggggcaa ctacgtggat caatttttct
     4741 aacatctata agcctcttct cgctaagttt tttagcaatg tctatctcaa gtttctttgt
     4801 agataatttc tcaaccattt actactcgag cttcacacat accttcccat tcttcctcgg
     4861 aagcattctc gcaaccatcg ctggtatcgg aaatacaaca actgccttcc agcaacaagt
     4921 gaatacattg actatcaaac aagctatagg tctgtttctt ggaggactag gagtagaact
     4981 tcttcttctc tttactcttc aattcagttc catctggacc tatctaattg gttttcttct
     5041 atccagttta gctacagcaa ctatgatttt tgctgctcgg gtacttcacg agaaaaccga
     5101 agatgtcaaa gaacctgcaa ttatcctctt cttttcaagt atttcttatg gtatctacct
     5161 cttccattgg cccttgctca ttatctttac acaactgaca aatgccacta tcgctacggg
     5221 attatccttt gttttttcta ctatcctatc aactatttcc ttctatattc tagaaccata
     5281 tattgctgat aaagtaggaa gcttgtttgg attagcaata gacttaaaac cctataaaaa
     5341 atggcttctt agcagctttg cttgcttgac catagttggc ttaggtatct gtctgtttgc
     5401 accaaaatta ggaagttttg aacaagagag tatggttagc aatctttatc aagctcagac
     5461 ccaactaaat acaacacgat ctgctgctga aaacgctaaa gctactagtt ttgaaattca
     5521 aaaaggagtt atcatctttg gcgattctgt tactgttcgc gcaagtgctg ccatacagac
     5581 cgcgctacca gatgcacaga tcgatggaac tgtcagtcga aatctctctg aaattgctaa
     5641 attgataaat ctttataagc aaaataatag cttgaaagag actgtagttg tagccctagg
     5701 tacaaatact acggataatt atcaggaact actagaccag ctagtcaaag attttcctaa
     5761 aggacgtcgc cttatttttg tcactcctta cgatggaaac ttccctccga gcgaatccat
     5821 ttcttatcaa actggtcaat acgagaaaga attggctgaa aaatatgatt acatttccat
     5881 tgcagactgg tatcaagttg caaaggataa tccaccaatt tggtacaata ccgaccttgt
     5941 tcatttcaat cttgaaagta atggaggcga agtcttcgcc caaacgataa aaaatgctgt
     6001 tgaagccgtt gctgatgctc caatcaaaaa ctagatttat acatcatcat cctctgagaa
     6061 tttctcggag gatttttgca cgattttccg ataaatccag cgcgaactct aagaaatggc
     6121 gctgtgcctg agctcagtct caataaatct tgtgaaataa gccacttcta caacggatgg
     6181 caaagcgaag atgacaagtt aaaactccta ccttttacag taggagttgg tgtcaaattg
     6241 actattttt
//
LOCUS       DASFQD010000122         6097 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.123, whole genome shotgun sequence.
ACCESSION   DASFQD010000122 DASFQD010000000
VERSION     DASFQD010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 6097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6097
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.123"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(156..1823)
                     /gene="dnaX"
                     /locus_tag="U1021_001917"
     CDS             complement(156..1823)
                     /gene="dnaX"
                     /locus_tag="U1021_001917"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002895702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEM4712414.1"
                     /translation="MYQALYRKYRSQTFGEMVGQEVVATTLKQAIEQGKISHAYLFSG
                     PRGTGKTSAAKIFAKAMNCPNQVGGEPCNDCYICQAITEGSLEDVIEIDAASNNGVDE
                     IRDIRDKSTYAPSLATYKVYIIDEVHMLSTGAFNALLKTLEEPTENVVFILATTELHK
                     IPATILSRVQRFEFKSIKVTDIQEHLAAILTKEGLIFDEQALTIIARRAEGGMRDALS
                     ILDQALSLSQDQQVTLEIAEEITGSISLRALDDYVASLCQGDSVTALQHLQTLFDQGK
                     SMSRFATDLLYYLRDVLIVQTGGEDTHLTTGFSENLALEQARIFTMIEMVTRGLADIK
                     SSPQPKIYAEMMTIRLAEDSSPSGAMAELPADLLGQLASLQQQVADLQKQLGQLSSQP
                     STVKPVSRKPQAPKKYRLDTSKVHAILQEAMENPTLARENLTRLQNAWSEIIESLSGA
                     DRALLVGSQPVAANENHAILAFDSPLNAEQTMKRDNLNTMFGNILSKAAGFSPQILAI
                     AQEDWVSIRAEFSAKAKGQKTQEIEKEASPVPEEFGFLADTVEIRND"
     gene            complement(1823..2320)
                     /locus_tag="U1021_001918"
     CDS             complement(1823..2320)
                     /locus_tag="U1021_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEM4712415.1"
                     /translation="MTKQEKISNYQLLLAQLEALLDGETNALANLSNASALLNQALPN
                     SVFTGFYLYDGSELILGPFQGGVSCVHIALGKGVCGEAAAKRQTILVDDVRLHDNYIS
                     CDATALSEIVVPMVKNDQLLGVLDLDSRLVADYDTIDQDYLEKFVALLVEKTDWNFAM
                     FGEKR"
     gene            complement(2385..2654)
                     /locus_tag="U1021_001919"
     CDS             complement(2385..2654)
                     /locus_tag="U1021_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HEM4712416.1"
                     /translation="MSIKQMVSMALVVWNLVVFITYGMDKGKARKNAYRISEKTLLLM
                     SYFGGGLGAWAGGTHFRHKTQKKYFQLAWAIGVLIDAVIMYWMWK"
     gene            complement(2742..3281)
                     /locus_tag="U1021_001920"
     CDS             complement(2742..3281)
                     /locus_tag="U1021_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEM4712417.1"
                     /translation="MPKQRILPHIILGIMGASGQMVTGKQITDYVQRDLGEFWQVAHS
                     QVYPELKRMTKEELITCHAVPGNEKEKQYAMTATGRQILDEWLSIPNEETPQQRDLFS
                     IKMFFIREKDDPRIPGLLQSQIELVTKHLKHLESRKVELFSTKESIQDNYGHYLILTR
                     AIERNRAQLKWLEDTLAEM"
     gene            complement(3283..3912)
                     /gene="udk"
                     /locus_tag="U1021_001921"
     CDS             complement(3283..3912)
                     /gene="udk"
                     /locus_tag="U1021_001921"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HEM4712418.1"
                     /translation="MTQKPIIIGVTGGSGGGKTSVSRAILDNFPNARISMIEHDSYYK
                     NQSHLTFEERILTNYDHPLAFDTDLMIYHISELLAGRSVDIPIYDYTQHTRSEKTYRQ
                     EPQDVFIVEGILVLEDKRLRDLMDIKIFVDTDDDIRIIRRIKRDMEERGRSLDSIIEQ
                     YTSVVKPMYHQFIEPTKRYADIVIPEGVSNVVAIDLINTKVESILRERG"
     gene            3995..4981
                     /locus_tag="U1021_001922"
     CDS             3995..4981
                     /locus_tag="U1021_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM4712419.1"
                     /translation="MLNFGIVGTSDISHRFIEAVHLSGYYQLQAVFSRKLETAAAFSE
                     QYEGVDLYTEWVKFLSAPIDVVYIASPNALHFEQAKAVLVAGKHAIVEKPMVSTPQEL
                     EQLRRVAQENNVFLFEAARNYHEQAQAIIREFLTDKTILGGSFGYAKYSSKMPELLAG
                     QMPNIFSTDFSGGALMDLGVYTLYAAIGILGTPRTARYVAQQLPSSIDLNGSGQLIYD
                     NYIVHIQAGKNITSNLASEIYTNDGTLTLNACQYISSAIFTKHDGEQIVLPIQAAQHP
                     MLEEALEIAQAIKQQNRKLVDQWLTVAESVHQTLYTMRQDAGIIFKADNNEI"
     gene            4971..6053
                     /locus_tag="U1021_001923"
     CDS             4971..6053
                     /locus_tag="U1021_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4712420.1"
                     /translation="MKSKFPSSWTDQLTLLGFDDFTPIQVQAFEPIANGKSLLAISPT
                     GTGKTLAYLWPSLLALTPKKAQQLLILAPNTELAGQIFDVCKAWSETIGLTAQLFLSG
                     SSQKRQIERLKKGPEILIGTPGRIFELIKLKKIKMMNINTIVLDEFDQLFSDSQYQFV
                     EKIINYVPRDHQLIYMSATAKFDRQKIAEDIESIDLSEQKLDNIQHCYMMVDKRERLE
                     TLRKFANIPDFRALAFFNSLSDLGASEDKLLYNGVNAVSLASDVNVKFRKVIIERFKN
                     HELNLLLATDMVARGIDIDNLECVLNFEVPFDQEAYTHRSGRTGRMGKEGLVITLVSS
                     PSELKQLKKYASVQEVILKSQELYKI"
BASE COUNT         1751 a         1437 c         1176 g         1733 t
ORIGIN      
        1 ccattcatag aagagttcgt cttcccaccc ccgcacagtt gattaggtca gatttggagt
       61 gtaaaacacg aacaaatctg ccaatcaacc actgcgctga gatgttgaca ctaactttga
      121 gaagcggtgc tgagcttttt gctcagcctc attttctaat catttctaat ctcaactgta
      181 tctgcgagaa agccaaattc ttctgggact ggactggctt ctttttcgat ttcctgtgtc
      241 ttttgccctt ttgctttcgc tgaaaattca gcacgaatac ttacccaatc ttcctgagca
      301 atagctaaaa tctgtggaga aaaacctgcg gccttgctga gaatatttcc aaacatggta
      361 ttgagattgt cacgcttcat cgtctgttca gcattaagcg gagaatcaaa ggctagaatc
      421 gcatgatttt cattggcagc aactggttga gaaccaacca acaaggcacg atcagcccca
      481 gataagctct cgataatttc actccaagca ttttgcaagc gggtcaaatt ttcacgcgcc
      541 aaggttggat tttccatagc ttcctgcaaa attgcatgaa ccttgctggt atccaatcgg
      601 tacttcttcg gagcctgtgg cttgcgtgaa actggcttaa cagtacttgg ttgactagat
      661 aattgaccta gttgtttctg taaatccgca acttgttgtt gcagactggc tagttgaccc
      721 agtaaatcag ctggcagctc tgccattgcc cccgaaggag aactatcttc agccaaacga
      781 atggtcatca tttcagcgta aatcttgggt tgaggactgg acttgatgtc cgccaagccc
      841 ctggtcacca tctctatcat ggtaaaaatc cgtgcctgct caagagctag attttctgaa
      901 aaacctgttg ttaaatgcgt atcctcacca cccgtctgca cgataaggac atctctcaaa
      961 tagtacaaaa gatctgtcgc aaaacggctc atactctttc cttggtcaaa caaggtttgt
     1021 agatgctgga gagctgtgac actatcccct tgacacagac ttgccacata gtcatccaag
     1081 gcacgcaagc tgatagaacc cgtaatttcc tcagcaattt ccaaggtcac ttgctggtcc
     1141 tgactaaggc tgagagcctg atccaaaatg gatagggcat cccgcatccc cccttctgcc
     1201 cgacgcgcaa tgatcgtcag agcctgctcg tcaaagatta gcccttcctt ggtcaaaatt
     1261 gcagccaagt gctcctgaat gtccgtcacc ttgatggact taaattcaaa tcgttgcacc
     1321 cttgacagaa tggtagcagg aatcttgtgc aattccgtcg ttgctagaat aaagaccaca
     1381 ttttcagtcg gttcttccaa ggtcttcaag agggcattga aggctccagt agacagcatg
     1441 tggacctcgt cgatgatata gaccttatag gtcgcaagac taggtgcgta ggtcgatttg
     1501 tcccgaatat cacggatttc atccacacca ttgttggaag cagcatcaat ctcaatcaca
     1561 tcttccaggc taccttccgt aatagcctga cagatataac aatcgttaca aggctcgcct
     1621 ccaacctgat taggacagtt catggccttg gcaaaaatct tagctgccga tgtcttaccc
     1681 gtaccacgag gacctgaaaa gagataggca tgactgattt tcccctgttc aatggcctgt
     1741 ttgagcgtgg tcgcaaccac ctcctgcccc accatctccc caaaggtctg gcttcggtac
     1801 ttcctatata aagcttggta cattagcgtt tttctccaaa catagcaaaa ttccagtccg
     1861 tcttctcaac caagagagca acgaactttt ctagatagtc ttggtcaatc gtatcataat
     1921 cagctaccaa tctcgaatcc aagtccaaaa cccccagcaa ctggtcgttt ttcaccattg
     1981 gcacaacgat ttctgatagg gctgtcgcat cgcaggaaat atagttgtca tgtagacgaa
     2041 catcgtctac gagaatagtc tggcgcttag ctgcagcctc accgcagaca ccctttccaa
     2101 gtgcaatatg aacacaggaa acgccaccct gaaaaggccc caaaatcaat tcactaccat
     2161 catacaagta aaatcctgta aagacagagt ttggtagagc ttgattgagc aaagcagaag
     2221 catttgatag attggctaaa gcattggttt caccatcaag aagagcttcc aattgagcca
     2281 ataatagttg atagtttgaa attttttctt gttttgtcat aggaacatta tagcatagtt
     2341 aagccgactt ttatagtccg agcgataaag aaaaaggctt gcgcctattt ccacatccaa
     2401 tacataatca ctgcatcaat caatacccct atagcccagg ctagttgaaa atactttttc
     2461 tgtgtcttat gccgaaaatg ggttccacct gcccaggcac ccagcccgcc accaaaatag
     2521 gacatgagta ataaggtctt ttctgaaatc cgataggcgt tctttcttgc cttcccttta
     2581 tccataccat aggtaatgaa gacaactaaa ttccaaacta ctagcgccat actaaccatc
     2641 tgtttgattg acatacattc ctccaattaa gtcacatttc ttcttactct aacataatcc
     2701 aaaacaggac acaaggaaaa acgattcgga aatccgaatc gttacatttc cgccagtgta
     2761 tcctctaacc atttgagctg ggcacggttg cgttcaatag cccgtgtcaa aatcaaatag
     2821 tgtccataat tgtcttggat actttccttg gttgagaaca gctcaacttt acgactttct
     2881 aggtgtttta agtgcttggt gactagttca atttgactct gcaacaaacc aggaatccgt
     2941 gggtcatcct tttcacggat aaaaaacatc ttgattgaaa acaagtctct ttgctgaggc
     3001 gtttcttcat ttggaatgga tagccattcg tctaaaatct gacgaccagt agccgtcatc
     3061 gcatactgct tttccttttc atttccaggt actgcatgac aagtaatcaa ttcttccttg
     3121 gtcatacgtt ttaattctgg atagacttgg ctatgggcaa cctgccaaaa ttcgcctaaa
     3181 tcacgttgaa catagtcggt aatctgcttg ccagttacca tttgaccgct agcacccata
     3241 atccctaata tgatatgagg taatattctt tgcttcggca tcttaaccac gctctcttaa
     3301 tatactctcc accttggtgt taatcaagtc aatagctaca acgttgctga cgccttcagg
     3361 aatgacgata tctgcatagc gcttggttgg ctcgataaac tggtgataca ttggtttcac
     3421 caccgaggtg tactgctcaa tgatactatc taagctacgg ccacgctctt ccatgtctct
     3481 cttaatgcgg cgaatgatac gaatatcgtc atcagtatcg acgaatatct taatatccat
     3541 taaatcccgc aaccgtttgt cttccaatac taaaatacct tccacaataa atacatcttg
     3601 tggttcctga cgataggtct tctctgaacg tgtgtgctga gtgtaatcat aaatcggaat
     3661 atccactgaa cgtcctgcta atagctcact gatatgataa atcatcaaat ccgtatcaaa
     3721 agccagtgga tggtcataat tggttagtat ccgttcttca aaggtcaggt gggactgatt
     3781 cttataataa gaatcgtgtt caatcataga tatacgagca tttgggaaat tatccagaat
     3841 ggcacgcgac acacttgtct tgccaccccc agatccgccg gttacgccaa taataatggg
     3901 tttctgagtc atcatcatct ccttctattt tcaatactat tttaccatga aacatggtat
     3961 aatgaaaagg ataacacaaa agaaatgaga atttatgctt aattttggta ttgttggcac
     4021 ctcagacatc tctcatcgtt ttatagaggc ggtccattta agtggatatt atcagctaca
     4081 ggctgttttc tcccgtaaac tagaaactgc tgctgccttt tcagagcagt atgaaggagt
     4141 cgatttatac acagaatggg taaaatttct ttctgctccc attgatgttg tctatattgc
     4201 cagtccaaat gccctgcact ttgaacaggc aaaagctgtt ctagttgctg gtaaacatgc
     4261 tattgttgag aagcccatgg tttctacacc tcaggaatta gaacaattgc gtcgcgttgc
     4321 ccaagaaaat aatgttttcc tctttgaggc tgctcgaaac tatcacgaac aagctcaagc
     4381 cattatccgt gaatttttga cggataaaac gattttaggt ggttcatttg ggtatgccaa
     4441 atattcttct aagatgcctg aattgttagc cgggcaaatg ccaaatatct tttcaactga
     4501 tttttccggt ggtgctctca tggatttagg tgtctatacg ctctacgccg ctatcggcat
     4561 tttgggaact cccagaacgg cccgctatgt agcacaacag ctaccttcta gtattgactt
     4621 aaatggttcg ggacaactca tttatgacaa ctatatcgtc cacattcaag caggaaaaaa
     4681 tattacgagc aatctagcga gcgaaatcta tacaaatgat ggaacactaa cactcaacgc
     4741 atgccagtat atcagctctg ctattttcac aaaacatgac ggagagcaaa ttgttttacc
     4801 aatccaagcg gcccagcatc ctatgctcga agaagcgcta gaaattgcac aggcaatcaa
     4861 gcaacaaaac cgcaagcttg tggaccagtg gttgactgtg gcagaaagcg tccatcaaac
     4921 actttacacc atgcgtcaag acgcaggaat aatctttaag gcggataaca atgaaatcta
     4981 aatttccctc cagctggacg gaccagctta ccctacttgg ctttgatgac tttactccta
     5041 tccaagtcca ggcctttgag cctattgcaa acggcaagtc ccttctagct atcagcccaa
     5101 caggcacagg aaaaaccctt gcctacctct ggcctagctt attagcacta actcctaaaa
     5161 aagcccaaca attgctcatc ctcgcaccaa atacagagct ggctggtcaa atatttgatg
     5221 tttgtaaggc ttggtcggag acaattgggt tgactgctca actattcttg tctggttcca
     5281 gtcaaaaacg ccagattgag cgactaaaaa aaggaccaga aatcctgatt ggaacacctg
     5341 gtcgtatttt cgagttgatt aaattgaaaa aaatcaagat gatgaatatc aacaccatcg
     5401 tcctagatga gtttgatcag ctattctccg attctcaata tcagtttgtt gaaaagatta
     5461 tcaactatgt acctcgtgac caccagttaa tctacatgag tgcaacagct aaatttgacc
     5521 gtcaaaaaat tgctgaggac attgaaagca ttgatttatc tgagcagaaa ttggataata
     5581 tccagcattg ctatatgatg gtagataagc gtgaacgttt ggaaactcta cgtaagtttg
     5641 ccaatatccc tgattttcgt gctcttgcat tttttaacag cctatcagac cttggtgcaa
     5701 gcgaagataa actactctat aatggtgtga atgcagtttc attggcttct gatgtcaacg
     5761 taaaattccg taaggtcatc atcgaacgtt tcaagaatca cgaactcaat cttctacttg
     5821 ctacagatat ggtcgcacgc ggtattgata ttgataactt agaatgtgtc ctcaactttg
     5881 aagttccttt tgaccaagaa gcctacactc atcgttctgg acgtactgga cgcatgggca
     5941 aggaaggtct tgtcatcact ctagtatcta gtcctagcga actaaaacaa ttgaaaaagt
     6001 atgcctccgt ccaagaagtc attctcaaga gtcaagagct ctacaaaata taataaacaa
     6061 tatacaaaag gcttagaacc agtgtttcta ctaacat
//
LOCUS       DASFQD010000123         5953 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.124, whole genome shotgun sequence.
ACCESSION   DASFQD010000123 DASFQD010000000
VERSION     DASFQD010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5953)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5953)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5953
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.124"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(72..629)
                     /locus_tag="U1021_001924"
     CDS             complement(72..629)
                     /locus_tag="U1021_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4712421.1"
                     /translation="MEIRLAHPNEMEAIVDILEDARAFLATSGINQWQGEYPNKENIF
                     DDILSGRGYVGIVDGKVAAYAAVHRGQEAEYEAIYEGKWQHNHPVYTTFHRIAAADEF
                     RGQGIIQTFLQGLIEGQKGPDFRCDTHEQNKTMQHILKKLGYVYCGKVPIDGERLAYQ
                     KIKQKSERSLYQEISEDDRWLLGNN"
     gene            complement(629..1720)
                     /gene="serC"
                     /locus_tag="U1021_001925"
     CDS             complement(629..1720)
                     /gene="serC"
                     /locus_tag="U1021_001925"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HEM4712422.1"
                     /translation="MTIYNFSAGPAVLPKPVLERAQAEFLDYNGSGMSVLEMSHRSKD
                     FDDIIKGAEATLRELMAIPDNYKVIFLQGGASLEFTMIPLNFAQGKKAYYLVGGSWGK
                     KAYTEAVKLSKTIAFEPILLGSTEDITYAELPTFDKNDIDPTAAYVHLTTNNTIEGTT
                     VYGIPDTNGVPVIADMSSNILAARYNVEDFAMIYAGAQKNIGPAGVTVVIVREDFLND
                     QPMLSSMLDYRIQAENDSLYNTPPAYSIYISKLVFEWVKEIGGVDEMEKINREKSGLL
                     YDYIDQSNFYTNPVRKKEERSVANIPFVSPSEELDAKFVKEATTAGFKNIKGHRSVGG
                     MRASLYNAFPHQGVVELIEFMKKFAAENA"
     gene            complement(2190..3053)
                     /gene="rsmI"
                     /locus_tag="U1021_001926"
     CDS             complement(2190..3053)
                     /gene="rsmI"
                     /locus_tag="U1021_001926"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEM4712423.1"
                     /translation="MKVQKSFKGQTSFGTLYLVPTPIGNLQDMTFRAVQILKEVDIIA
                     AEDTRNTGLLLKHFEVETKQISFHEHNAHEKIPVLIDWLKSGQSIAQVSDAGLPSISD
                     PGHDLVGAAIAEDIPVVALPGASAGITALIASGLAPQPHIFYGFLPRKSGQQKEFFQE
                     KKTYPETQIFYESPYRVADTLENMLTVYGDRQVTVVRELTKLYEEYQRGSISELLEYL
                     EENPLKGECLIIVEGAGEEVYPSADEVDLKAEVEREIASGIKPNQAIKEVAKRYQLKK
                     QEVYDIYHGLG"
     gene            complement(3055..3372)
                     /gene="yabA"
                     /locus_tag="U1021_001927"
     CDS             complement(3055..3372)
                     /gene="yabA"
                     /locus_tag="U1021_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication initiation control protein YabA"
                     /protein_id="HEM4712424.1"
                     /translation="MDKKEIFDALDDFSQNLLTTLAEVDAIKKHLQGVIDENTTLRLE
                     NSKLRERLEKEDKTGHKSSNFGKENLENIYEDGFHICTFSYGQRRDNDEPCMFCVELL
                     NRD"
     gene            complement(3392..4276)
                     /locus_tag="U1021_001928"
     CDS             complement(3392..4276)
                     /locus_tag="U1021_001928"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEM4712425.1"
                     /translation="MKIEELRNLQPNVFQRFVTILEQRRLVHAYLFSGDFASFDMAIF
                     LSQSLFCQEKEGVLPCQKCRSCRLIEANEFSDLTVIAPQGNVIKTDTIRELVKNFSQS
                     GFESNKQVFIIRDAEKMHANAANSLLKVIEEPQSAIHILLLTNQEEAVLPTIKSRTQI
                     IGFPKNIPAMERMLEEEGLLKTQANLLAQLVSSQEEAKKLAENKNFLDLMGQTKKFTD
                     LLLVEPTRAYLQVGILVSLAVEKAEQGRLFDLLSLILSEKMMESANVREKMDAVLKAK
                     KMWQANVSLQNSLEYITL"
     gene            complement(4273..4911)
                     /locus_tag="U1021_001929"
     CDS             complement(4273..4911)
                     /locus_tag="U1021_001929"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004193056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEM4712426.1"
                     /translation="MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGV
                     AIAEEIRNIILNPANTEMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSS
                     IAYQGFGRGLDIGDIHWLNQFATDGLKPDLTLYFDIDTEEGLARIARNADRDVDRLDM
                     EKADMHRRVRQGYLNILEQEPERFVKIDASQPLEAVVADALAVIKKRFAERT"
     gene            5086..5952
                     /locus_tag="U1021_001930"
     CDS             5086..5952
                     /locus_tag="U1021_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM4712427.1"
                     /translation="MVRLKNILLILLGAGLFAFGLNYLIMPNRLFEGGATGLTLIIYY
                     LFHIQPWIMNIVINIPLFILGWKILGKKTLYLSILGTFSVTFWLAIFEKIHFSINLQQ
                     DLILVSILGGILMGLGLGTIFRAGGTTGGSDIIARIGHKFLPYSIGQIILAVDILILT
                     LIVIVFKDLRTVLYTLMMVAIASKVIDFVTEGGYGSKGVMIVSQKSDQLAQAIDCEIE
                     RGVTFIKAQGFYSKADVNMIYSVIYKSQLQEMKELIHRIDPHAFITITDAHEVLGEGF
                     TLDRDKKPIERH"
BASE COUNT         1694 a         1294 c         1066 g         1899 t
ORIGIN      
        1 gctgagatgt tgactcgaac cttgagaagt gatatgaagc tttttcccgg tccttttctt
       61 tctttatttc attaattatt tccgagtaac caacggtcgt cttcactgat ttcctggtaa
      121 agactccgct cgctcttttg cttgattttt tgataggcta gacgttctcc atctattggg
      181 actttaccac aatagacata gcctaatttt tttagaatgt gctgcattgt cttattctgc
      241 tcgtgggtat cacagcggaa atccggtcct ttttgacctt caattaaacc ttgcaaaaaa
      301 gtttgtatga ttccttgacc acgaaattcg tcagctgctg caattctatg aaatgttgta
      361 tatacaggat gattgtgctg ccattttcct tcatatatgg cctcatattc tgcttcttga
      421 ccacgatgaa cggcggcata ggctgccacc ttaccgtcaa ctataccaac gtaacctctg
      481 ccagaaagaa tgtcatcaaa gatattctct ttattaggat actctccctg ccattgattg
      541 ataccagagg ttgctagaaa tgcacgagca tcttcaagaa tatcgacaat agcctccatc
      601 tcatttggat gtgctaatct aatttccatt aagcattctc cgctgcaaat tttttcatga
      661 attcaatcaa ttcaaccaca ccttgatgtg ggaaagcatt atagagcgac gcccgcatcc
      721 cacctactga acggtgacct ttgatgtttt taaaaccagc tgttgttgct tctttgacaa
      781 acttggcatc taattcttca cttggtgaga caaaaggaat gttcgctact gaacgctctt
      841 cttttttgcg aacagggttt gtatagaaat tagactggtc gatatagtca taaagcaaac
      901 cagatttttc acggttgatt ttttccatct catcaacacc accaatttct tttacccatt
      961 caaagacgag tttagaaata tagatagaat aagctggtgg cgtattataa agagagtcat
     1021 tttctgcttg aatacggtag tccaacatgc ttgaaagcat tggttgatca ttgaggaagt
     1081 cctcacgaac aatcaccacc gtcacaccag caggaccaat atttttctga gcgccagcat
     1141 aaatcatggc aaaatcttca acattatagc gagctgctaa gatgtttgaa gacatgtcgg
     1201 caatgactgg cacaccattg gtgtcaggaa taccataaac tgttgttcct tcaatagtgt
     1261 tatttgttgt caaatgcacg taagcagcag ttggatcaat atcattttta tcgaaggttg
     1321 gcaattctgc ataggtaata tcttccgttg atccaagcaa aattggttca aaggcaattg
     1381 ttttagacag cttcacagcc tcagtatagg cttttttacc ccatgagcca cctacaagat
     1441 agtaggcttt cttaccttga gcgaagttga gaggaatcat tgtgaattcc aaagaagctc
     1501 caccttgcaa gaaaataacc ttgtaattat ctggaatggc catcaattca cgaagcgttg
     1561 cctcagcacc tttaataata tcatcgaagt ccttggagcg atgcgacatc tccaaaacgc
     1621 tcattcccga accattgtag tccaagaatt cagcttgggc gcgttcaagt actggttttg
     1681 gcaatactgc aggacctgca gagaagttgt agattgtcat aaaatccctc cattaagtta
     1741 gtctgttcat tatatcacaa atattcagac aattccataa aatatgatta ttttgtaaaa
     1801 acattcggat ttcttatatt tattctactt tctaaagaac ctcttacttt tagccataaa
     1861 cgaggcgctt gcctcacagg gattcatcag gtttcaatga aaattttatg accagatttg
     1921 actgtttggg gagtgtcgcc aattgctatc tgcatattaa tactcaatga aaatcaaaag
     1981 tagcttagct gggatatagt tgaaggctgg aagtatagag aactgtgttc gcgtcattaa
     2041 gccgaagata gaactctgtt cctttctcat ttcaaggtaa cagactgaaa agatccactg
     2101 gagcttttca ctcatcaagg ctcttgacaa cggataattt tgattttcga agagtataag
     2161 cttgcataaa catacaaaaa aactaggtct taacctagtc catgatatat atcgtatact
     2221 tcttgttttt tgagttggta gcgtttggcc acttctttga tagcctgatt aggttttatg
     2281 ccacttgcaa tttccctttc tacctcagcc ttcaagtcta cttcgtcagc agaaggatag
     2341 acttcctcac cagcaccctc gacaataatc aagcattctc ccttaagtgg attttcttcc
     2401 aaatactcta gtaattcgga aatgcttcct ctctggtatt cttcgtataa cttggtcaat
     2461 tctcgaacaa ctgttacctg acgatcacca taaactgtca acatattttc taaggtatct
     2521 gccacacgat atggagattc atagaaaatt tgcgtctcag gataggtctt tttttcttgg
     2581 aaaaattctt tttgctgccc cgattttctc ggtaaaaatc cataaaaaat atgtggctgg
     2641 ggtgccaaac cagatgcaat caaggctgta attcctgccg atgctcctgg aagtgctaca
     2701 acaggaatat cttccgcaat cgctgcccct accaggtcat gaccaggatc cgaaatggaa
     2761 ggcaggcctg catcagaaac ttgcgcaatg gactgaccag atttgagcca atcaatcaaa
     2821 actggaattt tttcatgggc attgtgttca tgaaaggata tttgcttggt ttctacttca
     2881 aaatgtttga gtaggagtcc tgtatttctt gtatcttccg ctgcaattat atccacttct
     2941 ttcaaaatct gaacagctcg gaatgtcata tcctgtaagt ttccaatagg cgttggcacc
     3001 agatataaag tcccaaaact cgtctgtccc ttaaatgatt tttgtacttt catcctaatc
     3061 tcgattcaat aattctacac agaacataca aggttcatca ttatccctac gttgaccata
     3121 agagaaggta caaatatgga aaccatcttc gtaaatattc tccaaattct ccttaccaaa
     3181 gttggaagat ttatggcctg tcttatcttc tttttccaaa cgttcgcgca acttggaatt
     3241 ttccaagcgg agggtcgtat tttcatcaat aactccctgt aaatgctttt tgatagcatc
     3301 cacttctgcc aacgtggtta gaagattctg cgaaaaatca tctagggcat caaaaatttc
     3361 ttttttatcc attatctccc tttcttttat tttacagagt tatatactct agactatttt
     3421 gtagacttac gtttgcctgc cacatcttct tagccttaag aacagcatcc attttttcac
     3481 gtacgtttgc cgattccatc attttctcag ataatatcag actcagaagg tcaaacaaac
     3541 gtccctgctc agctttttcc acagctaaag acactaggat tccaacttgc aaataagcac
     3601 gtgtaggctc caccaagagc aagtctgtaa atttctttgt ctgtcccatc aaatctaaaa
     3661 agtttttatt ttctgctaac tttttcgctt cttcttgact tgaaaccagt tgagctaaga
     3721 gattcgcttg tgtttttaac aagccctcct cttctaacat tcgctccatg gccggaatat
     3781 ttttaggaaa acctataatc tgtgtccgac tcttgatagt aggaaggaca gcttcttcct
     3841 gattggtcaa taataagatg tgaatagctg actgaggttc ttcaatcact tttagcaaag
     3901 agttggctgc gttagcatgc attttctcag catcacgaat aatgaaaacc tgcttattgg
     3961 attcaaatcc agattgtgaa aaattcttaa ctaattcacg tatcgtatct gttttgataa
     4021 catttccctg cggtgcaata acagtaagat ctgaaaactc atttgcttca attagacgac
     4081 aagaccgaca cttctgacaa ggaaggacgc cttctttctc ctgacaaaat aacgattgac
     4141 tgagaaaaat tgccatatca aaactagcaa agtcacctga aaatagatag gcatgcacca
     4201 aacgtctctg ctctaaaatt gtcacaaaac gttgaaatac attgggttgt aagtttctaa
     4261 gttcttcaat cttcatgttc tttctgcaaa ccgtttctta atgaccgcca gagcatctgc
     4321 aacaacagcc tctagtggct gactggcatc aatctttaca aaccgctctg gttcctgctc
     4381 taaaatatta agatagcctt gacgcacccg tctatgcata tctgcttttt ccatatccaa
     4441 gcgatccaca tcacggtcag cattgcgggc aattcgagcc agcccctctt ctgtatcaat
     4501 atcaaaatag agggttaaat ctggctttaa accatctgtt gcaaactggt tgagccaatg
     4561 aatgtcacct atatccaacc cccgtccaaa tccttgatag gcaatagagg aatcgataaa
     4621 acgatcaatc aagagcaatt tcccctgtgc caagggtgga agaatcttct ctttcaaatg
     4681 ctgacgtcgt gctgcaatga acaataacag ctccgtctta tcatccattt cagtatttgc
     4741 agggttcaga ataatattgc gaatttcttc tgcaatagcc accccacctg gctctctagt
     4801 tgtgactact tctggcccca attcctgcaa ggctggcaat aactgttgca ataccgtcgt
     4861 tttccctgcc ccatctggac cttcaaatgt aataaaaaaa ccgtttctca tctttccctc
     4921 gctcttagta ccagtatgca cagttcagca cttcacttgt gaagactggt tcttagatat
     4981 tcattccatt ttaccaaaaa ttagtcaaaa aatcacttga aaattgactt gtttttaagg
     5041 agaaaatctt ttaaaattga tatatacaca tattcggaga tgcttatggt tcgtttgaaa
     5101 aatattttac ttattttgct tggtgcaggg ctatttgcct ttgggctaaa ttatttaatc
     5161 atgcccaatc gtctgttcga gggtggcgca actggattga cgctgattat ttactacctt
     5221 ttccatattc aaccttggat aatgaacatt gtgattaata ttccattgtt catcctcggg
     5281 tggaaaatac tcggaaagaa gactctctat ctcagtatct taggaacctt tagcgttacc
     5341 ttttggttgg ccatttttga aaaaatccat ttttcaatca atctacaaca agatttgata
     5401 ctcgttagta tcctgggtgg gattcttatg ggactaggat taggaaccat cttccgtgct
     5461 ggcggaacga ctgggggaag cgatatcatt gctcgtatag gtcataaatt cctaccttac
     5521 tccattggac aaatcattct tgcagttgac atcctcatcc taactctgat tgttattgtt
     5581 tttaaagacc tccgaacagt tctatatact ttaatgatgg ttgctattgc ttccaaggtt
     5641 attgattttg tcactgaggg cggatatggt agcaaggggg ttatgattgt ttctcaaaaa
     5701 tctgaccaat tggctcaggc tattgattgt gaaatcgagc gtggtgtcac ctttatcaaa
     5761 gcacaaggtt tctacagcaa agccgatgtc aacatgattt actcggtcat atataagagc
     5821 caactccaag agatgaagga gcttattcat cgtattgacc cccacgcatt tatcaccatt
     5881 acagacgcac atgaagtact cggtgaggga tttactttag atcgagataa aaaaccaata
     5941 gaacgccatt aaa
//
LOCUS       DASFQD010000124         5951 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.125, whole genome shotgun sequence.
ACCESSION   DASFQD010000124 DASFQD010000000
VERSION     DASFQD010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5951)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5951)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5951
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.125"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            114..1244
                     /locus_tag="U1021_001931"
     CDS             114..1244
                     /locus_tag="U1021_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEM4712428.1"
                     /translation="MNTSFKEKVILILLSGATLLAVLNWSSIYGAIQQLLGSMNSLFI
                     GAIFAFILNVPMKKLEDQFEKISFLKKSKRSLAIVGVLIGFALIVTGLVVIVLPTLVT
                     TVSELVSVSSTAIPKSVNALTNFLESNGLLSGQIGDQIASFLDQLKNLTLISSLVTQI
                     LSGLVSNVTGIFSNTMTLIMAFFFTLAILGSKEHLQAMTRKFLQATLPEKAVRVVNYI
                     GEVIVDTYDRFLMSQIVEACIIGILVFVSYSLSGIPYASMAGILAGVLSFVPYIGPFS
                     ACLISALFVAVQNPLLALWSIVLFQILQLIEGNVIYPRVVGQSVGLPTLFTLAAALIG
                     GNLFGLLGMVFFTPIFAVVYRLVREWVASRLKKQDELLVESE"
     gene            1316..1807
                     /gene="nrdR"
                     /locus_tag="U1021_001932"
     CDS             1316..1807
                     /gene="nrdR"
                     /locus_tag="U1021_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HEM4712429.1"
                     /translation="MRCPKCQSLKSSVIDSRQAEDGNTIRRRRSCDQCGQRFTTYERI
                     EEKTLVVVKKDGTREQFSREKIFNGIIRSAQKRPVSTDDIDEVVNRIEQKVRAQGDSE
                     IESDVIGNLVMEELVALDEITYVRFASVYRSFKDVGELENLLKQMISKGSKVKPGKKD
                     ETK"
     gene            1794..2945
                     /locus_tag="U1021_001933"
     CDS             1794..2945
                     /locus_tag="U1021_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation/membrane attachment
                     protein"
                     /protein_id="HEM4712430.1"
                     /translation="MKPNDLFAYIKISPFTPDIVSLSQCYQPIIGFDALALYYYFYSF
                     ADQGQGRYKWTVILNHMDFGMNRLEKALDVLTAMGLLELYRADELTGLALQAPLTVKS
                     FLATPLYKNLLARKIGESSMENLLVHQPNQEQNISKTFSQVFTMDGQAPVIFEPKHDF
                     DWSAFKALMAKDKLLFQDEAEDIIALSYIAEQAGWTWLETYRQAKATAIGQTISTKRL
                     QQSRQSLPTESTNLTAQEQAIVREAKSKSSLTFLSFIKEQRKAAVTGTERKCLTDLAN
                     LGLLDEVINVLVLYTFNKVDSANLNEKYAMKLGNDFSYKGIGSAEAAVLYLRELKTGQ
                     AVTKSSQPQKSNVPEWSKEEVVVDNSPEAQARMEALRKRMLENESKGGS"
     gene            2945..3844
                     /gene="dnaI"
                     /locus_tag="U1021_001934"
     CDS             2945..3844
                     /gene="dnaI"
                     /locus_tag="U1021_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaI"
                     /protein_id="HEM4712431.1"
                     /translation="MKSVQDRLSQATNPSPKSYQQLYQEIVSDPEVAAFIKKEGLTQQ
                     EITLSISKFLEYISQRDLFVKRDQAYIAKGYQPVLVMNEGYADVSYLETEELVEYRRL
                     EAIKNRIQLINMPLALKKVTGEDLDFTDINREEVYDAIATFVKHFDEQPKGLYIYGNF
                     GIGKSYLMAYLAHRLSIIHHLSTTMLHYPTFVVDIKNAIKDGSVKERIDEIKMAQVLV
                     LDDIGAEQHSPWVRDDVLQVILQYRMQENLPTFFTSNFSFDDLERHFASGKSGDETWQ
                     AKRVMERIRYLARDLHLKGNNRR"
     gene            3841..4554
                     /locus_tag="U1021_001935"
     CDS             3841..4554
                     /locus_tag="U1021_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003041432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent oxidoreductase"
                     /protein_id="HEM4712432.1"
                     /translation="MNETIDLMLNHTSVRRFTEEPIEAEHLQAIISAGRAASSWKNFQ
                     SYSIIVVQSEEKKQALYDLVPQPAILQAQAILLFVGDHNRASKAAQLHGSDFDVKGTE
                     NLLISSVDASLAGQNALLAAESLGYGGVFIGMIRHKALAIAELFNLPDYTYPIFCIAL
                     GRPAQNHPVKPRLESEAIVFQEEYVEQGMEVIQAYDQVQTEYAGARQTETWSERMVAQ
                     FGQAEQPETKSILEKNKLL"
     gene            4573..5883
                     /gene="der"
                     /locus_tag="U1021_001936"
     CDS             4573..5883
                     /gene="der"
                     /locus_tag="U1021_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018377046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEM4712433.1"
                     /translation="MALPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYA
                     TGEWLNRKFSLIDTGGIDDVDAPFMEQIKHQAEIAMDEADVIVFVVSGKEGVTDADEY
                     VSRILYKTNKPVILVVNKVDNPEMRNDIYDFYSLGLGDPYPVSSVHGIGTGDVLDAII
                     ENLPVQEVEENPDIIKFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTHFT
                     DPEGQEFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIERSDVILMVINAEEGIREYDK
                     RIAGFAHEAGKGMIIVVNKWDTLEKDNHTMKQWEDDIRDQFQYLSYAPIIFVSALTKQ
                     RLHKLPEMIKAISESQNTRIPSAVLNDVIMDAIAINPTPTDKGKRLKIFYATQVATKP
                     PTFVVFVNEEELMHFSYMRFLENQIRKAFVFEGTPIYLIARKRK"
BASE COUNT         1652 a         1174 c         1408 g         1717 t
ORIGIN      
        1 tgagatgttg acacgaactt tgaaaagaga ggttggtctt tttgtccagc ccctctttct
       61 ttttctataa gcgtgtgata aaataatagc caataagtaa gaatggaaaa gttatgaata
      121 catcatttaa agaaaaagtc atattgatac tcttatctgg agcgacattg ttagctgttc
      181 tcaactggtc tagtatttat ggggctattc aacaattatt aggcagtatg aattcgcttt
      241 ttattggagc tatttttgcc tttattctca atgttcccat gaaaaaatta gaagatcagt
      301 ttgaaaaaat ttctttttta aagaaatcca agcggtcttt ggcaattgtt ggagtattaa
      361 ttggatttgc tttaattgtg acaggactag tggtgattgt tcttcctaca ttggtgacga
      421 ctgtttcaga actggtttcg gttagtagca cagccattcc aaaatcggta aatgccctaa
      481 ctaattttct tgaatcaaat ggtcttttgt cgggacaaat cggagaccag attgccagct
      541 ttttggatca gttgaagaat ttaacactta tttcaagttt ggtcacacag attttatctg
      601 gcttggtgtc caatgtgacg gggatttttt cgaatactat gacgttgata atggctttct
      661 tcttcactct agcgatttta gggagcaagg aacacttgca ggcgatgacg agaaagttct
      721 tgcaggctac cttgccagag aaggctgtca gagtagtgaa ctatattgga gaagttattg
      781 ttgataccta tgaccgattc ttgatgagtc agattgttga ggcgtgtatc attgggatac
      841 ttgtctttgt tagttattcg ctctcaggaa ttccttatgc cagcatggct ggtattttag
      901 ctggggtcct atcgtttgta ccttatatcg gtcctttttc agcgtgtttg attagtgctc
      961 tctttgtggc ggtacaaaat ccgctcttgg cactctggtc tatcgtactc ttccagattc
     1021 ttcagttgat tgaagggaat gtgatttacc cgcgcgtggt tggtcaatca gttggtcttc
     1081 cgactctctt taccctggct gcagccttga ttggtggtaa tttgtttggt ctacttggta
     1141 tggtcttctt taccccaatt tttgcggttg tctaccgctt ggttcgtgaa tgggttgcca
     1201 gtcgattgaa gaagcaagat gaattattgg tagaaagtga gtaattctcg ctttctttta
     1261 tttttgtcat ttttatgcta tactgaagtg ataaagttta tgtaggagaa agagtatgcg
     1321 ttgtccaaaa tgtcagagtt tgaaatcaag tgtcattgat agtcgtcagg ctgaagatgg
     1381 caataccatc cgtcgtcgtc gttcctgcga ccaatgtggt caacgtttta ccacctatga
     1441 acggattgaa gagaaaactc tagtcgttgt gaaaaaggac ggaactagag agcagttttc
     1501 acgtgaaaag attttcaatg ggattattcg atctgcgcaa aaacgtccgg tatccaccga
     1561 tgatattgat gaagtggtga atcggattga acagaaggtt cgagcacaag gtgatagtga
     1621 aatagaatcc gatgtcattg ggaatttggt aatggaagaa ttggtcgcat tggatgaaat
     1681 cacctatgtg cgttttgcat cggtttatcg ttctttcaaa gatgttggag agctagaaaa
     1741 tttgcttaag cagatgattt ccaaaggaag taaggtaaaa ccgggaaaaa aagatgaaac
     1801 caaatgattt atttgcctat ataaaaatca gcccgtttac acctgatatt gtcagtctta
     1861 gccaatgcta ccagccgatt atcggttttg atgctttagc gctttattat tacttttata
     1921 gttttgccga tcaagggcaa ggacgttaca aatggactgt cattctcaat cacatggatt
     1981 ttgggatgaa tcgtttggag aaggctctgg atgttctgac tgccatgggg ctcctagaac
     2041 tctatcgtgc agatgaatta acaggtttgg cgctacaagc ccctctgacc gtaaaaagtt
     2101 ttctagcgac acccttgtat aagaacttgt tggcaaggaa gattggggag tcaagcatgg
     2161 agaatctgct tgttcaccaa cccaatcaag aacagaatat ctcaaaaaca ttttctcagg
     2221 tctttactat ggatgggcag gcaccagtta tttttgaacc gaaacatgat tttgactggt
     2281 ctgccttcaa ggcattaatg gctaaagata agcttctttt tcaggatgaa gctgaggata
     2341 ttattgcgct tagttacata gcagagcagg cagggtggac ctggttggaa acctatcggc
     2401 aggctaaagc aacagctatt ggacagacca tctcgaccaa acgcttgcag cagtcacgtc
     2461 agtcattgcc aacagaaagc acaaacctca ctgcccaaga acaagccatt gttcgtgaag
     2521 caaaatcaaa atccagccta accttcctgt cctttatcaa ggagcaacgg aaggcagctg
     2581 tgacaggaac agaacgaaaa tgcttgacgg atttggccaa tttgggtctg cttgacgaag
     2641 ttatcaatgt cttggtcctc tataccttta acaaggtgga ctcagccaat ctaaatgaaa
     2701 aatacgctat gaagctgggc aatgattttt cctacaaggg aattggcagt gcagaggcag
     2761 ctgttcttta cctaagagag ttgaagacag gtcaagctgt taccaagtcg agccagccac
     2821 agaaaagcaa tgtgcctgag tggagtaagg aagaggttgt cgtggataac agtcctgaag
     2881 ctcaggcaag aatggaagca cttagaaaac gaatgttaga aaacgaaagc aagggaggta
     2941 gctgatgaaa tcagttcaag acaggttgtc gcaggcaacc aatccaagtc caaaatcgta
     3001 tcagcaactc tatcaggaga tagtgagtga tcctgaagtc gctgctttta tcaaaaaaga
     3061 aggtttaacc caacaggaaa tcaccctctc catttctaag tttttggaat atatcagcca
     3121 gcgcgacctc tttgtcaagc gagaccaagc ctatattgct aaggggtatc aaccagtttt
     3181 ggtcatgaat gagggctatg cggatgtgtc ctatcttgag acagaagaat tggtcgaata
     3241 ccgtcgtttg gaagctatca agaaccgtat ccagctcatc aatatgcctc tggctctcaa
     3301 aaaagttaca ggtgaggact tggattttac ggatattaat cgtgaagaag tttatgatgc
     3361 tattgctact tttgttaagc attttgatga acagccaaaa ggtctttata tatatggcaa
     3421 tttcggtatt ggaaaaagtt atttgatggc ttatttggct caccgtttat caatcattca
     3481 ccacctctct accaccatgc tccattatcc gacctttgtt gttgatataa aaaatgccat
     3541 caaagatggt tctgtcaagg agcgaattga tgaaatcaag atggctcagg tcttggtgct
     3601 agatgacatc ggagcggagc aacatagtcc ttgggtacgt gacgatgtgc tgcaggttat
     3661 tcttcaatac cgcatgcagg aaaatctgcc gaccttcttt acctccaatt tctcctttga
     3721 tgatttggag cgtcatttcg cctctggcaa gtctggtgat gagacctggc aggccaaacg
     3781 ggttatggag cggattcgct atctggctcg cgatttgcat ttgaaaggaa ataaccgccg
     3841 atgaatgaaa ccattgattt gatgttgaac catacttccg tacgtcgttt tacggaggag
     3901 cctattgagg cggaacattt gcaagctatt atttcagctg ggcgagctgc atctagctgg
     3961 aagaatttcc agtcctattc cattattgtg gtgcagtcgg aggagaaaaa acaggctctc
     4021 tatgacctgg tgccccagcc agctatttta caggcccagg ccattttgct ctttgtgggc
     4081 gaccacaatc gtgccagcaa ggcggctcaa ctccatggtt cagactttga tgtcaaagga
     4141 acagagaatc tcctgatttc ttctgttgat gcgagcctag cagggcaaaa tgccctttta
     4201 gcagctgaaa gcctgggtta tggtggggtc tttatcggca tgattcgtca caaggctttg
     4261 gcaatagcag agctgttcaa cttgcctgac tatacctatc ctattttctg cattgccctg
     4321 ggtcgaccag cccaaaacca tcctgttaaa ccacgtttgg aaagcgaagc cattgtcttt
     4381 caggaagagt atgtggagca aggcatggaa gtcatccaag cctacgacca agttcagacg
     4441 gaatatgcag gagcccgtca gacagaaacc tggtccgagc gtatggttgc ccagtttggt
     4501 caggctgaac aaccagaaac aaagtctatc ttagaaaaga ataaattatt gtaaactaga
     4561 agaggaggag ctatggctct accaactatc gccatcgttg gccgtcccaa cgttggtaaa
     4621 tcaacactat ttaaccgtat tgcgggggaa cgtatttcta tcgtagaaga cgttgaaggt
     4681 gtgacccgtg accgtattta tgctactggt gagtggctca accgtaagtt ttccttgatt
     4741 gatacaggcg gtattgatga tgtggatgca ccgttcatgg aacaaatcaa gcaccaggct
     4801 gagattgcta tggatgaggc ggatgtcatt gtctttgtcg tatcaggtaa ggaaggtgtg
     4861 accgatgccg atgaatacgt atcgcgtatc ctttataaga ccaacaaacc agttattttg
     4921 gttgtcaata aggtcgataa ccctgaaatg cggaacgaca tctacgattt ttattcactc
     4981 ggtcttggag atccttatcc agtatcttct gtacacggta tcggaacagg ggatgtcttg
     5041 gatgctatca ttgaaaatct gccagtccaa gaagtagaag aaaatccaga cattatcaag
     5101 ttcagcttga ttggtcgtcc aaatgttggt aaatccagtt tgattaacgc tattttgggg
     5161 gaagagcgcg tgatcgcctc gcctgttgcg ggaacgaccc gtgatgccat tgatacgcac
     5221 tttacagacc cagaagggca agaatttacc atgattgata ccgcaggcat gcgcaagtct
     5281 ggtaaggtct atgaaaatac ggagaaatac tctgttatgc gtgccatgcg tgccattgaa
     5341 cgctcggatg ttatactcat ggtcatcaat gcagaagaag gcattcgtga gtacgataaa
     5401 cgtattgcag gttttgccca tgaagctggt aagggaatga ttatcgtggt caacaagtgg
     5461 gatacgcttg aaaaagacaa ccataccatg aagcagtggg aagacgatat tcgtgaccag
     5521 ttccaatact tgtcttacgc accgattatc tttgtatcag ccttgaccaa gcaacgcttg
     5581 cacaagttgc ctgagatgat taaggccatt agcgaaagcc agaatacccg tattccgtcg
     5641 gctgttctca atgatgtcat catggatgcc attgccatta acccaacacc gactgacaag
     5701 gggaaacgtc tcaagatttt ctatgcgaca caagttgcga ccaaaccacc gacctttgtg
     5761 gtctttgtca acgaagaaga gctcatgcac ttctcctata tgcgtttctt ggaaaatcaa
     5821 atccgtaagg cctttgtatt tgaaggaaca ccgatttatc tgattgcacg gaaacggaaa
     5881 taaggctggg caaaaagtcc agccacgctt ctcagagttc gggtcaacat ctcagcgcag
     5941 tggttgattg g
//
LOCUS       DASFQD010000125         5923 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.126, whole genome shotgun sequence.
ACCESSION   DASFQD010000125 DASFQD010000000
VERSION     DASFQD010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5923
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.126"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(38..1708)
                     /locus_tag="U1021_001937"
     CDS             complement(38..1708)
                     /locus_tag="U1021_001937"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019803354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEM4712434.1"
                     /translation="MKTDIEIAQSVTLKPITEIVEKVGISFDDIELYGKYKAKLSFDK
                     INAVKDNAPGKLILVTAINPTPAGEGKSTVTIGLADALSKIGKKTMIALREPSLGPVM
                     GIKGGAAGGGFAQVLPMEDINLHFTGDMHAITTANNALSALIDNHIHQGNAVGIDQRR
                     IIWKRVVDLNDRALRKVTVGLGGPLNGIPREDGFDITVASEIMAILCLATDINDLKER
                     LANIVIGYRFDRSPVYVRDLAVEGALTLILKDAIKPNLVQTIYGTPAFVHGGPFANIA
                     HGCNSVLATTTALRLADYTVTEAGFGADLGAEKFLDIKVPNLPKAPDAVVIVATHRAL
                     KMHGGVAKTELSAENVEAVKAGFSNLKRHVENIQKYGIPAVVAINEFVSDTADEIAAL
                     KELCAEIGVPVELASVWANGADGGVELAETVVATIENQAANYQRLYKAEDSLEEKVTK
                     IVTQIYGGSGVVFEKKARNQLTEFAKNGWDKLPVCMAKTQYSFSDDQFALGAPTDFDI
                     TVREFVPKLGAGFIVALTGDVMTMPGLPKAPAALNMDVAADGTAIGLF"
     gene            2212..2907
                     /locus_tag="U1021_001938"
     CDS             2212..2907
                     /locus_tag="U1021_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantothenate--cysteine ligase"
                     /protein_id="HEM4712435.1"
                     /translation="MKLLITSGGTSEAIDQVRAITNHASGNLGKIIAEQALKRGHEVT
                     LVTTRQAVKPDSQKNLTIIEITNVDSLKETLEPLVKSHQALIHSMAVSDYTPVYMTGL
                     DELRATEDSSSLLKKQNTESKISSKDDYQVLFLKKTPKVISYVKKWNPAITLFGFKLL
                     VNVPKEELFAVARQSIERNGADYILANDLKDIGENQHIAYLVDKTREIQAQTKDEIAQ
                     LILNTLEKGEQNG"
     gene            2900..3448
                     /gene="coaC"
                     /locus_tag="U1021_001939"
     CDS             2900..3448
                     /gene="coaC"
                     /locus_tag="U1021_001939"
                     /EC_number="4.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantothenoylcysteine decarboxylase"
                     /protein_id="HEM4712436.1"
                     /translation="MANITLAVTGSISAYKAADLTSQLTKLGHQVTVLMSRSAMDFIT
                     PLTLQSLSKNLVHTDVMIEENPTLIKHIDIAKETDVFLVAPASANTIAKLANGMADNI
                     ITATALALPIGTKKLLAPAMNTNMYLNPATQKNIKTLIEYGFEEIKPREALLACGDFG
                     TGALAEVTDILEKVSNTLDEKK"
     gene            3435..4004
                     /locus_tag="U1021_001940"
     CDS             3435..4004
                     /locus_tag="U1021_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HEM4712437.1"
                     /translation="MKKNKSTQIATIAIFFAVMIVINILSSIIFNILPVPIKPTIVHI
                     PVIIASIIYGPRVGACLGALMGLMSMTHNTIILLPTSYLFSPFVENGNVYSIIIAVVP
                     RILVGITPYFVYKWIKNRKGLFIAGAIGSMTNTIFVLGGIFFLFSSVFDGNIQAMLAT
                     VLGTNSIAEMIISSVLTAALVPTLQKIQK"
     gene            4095..5813
                     /locus_tag="U1021_001941"
     CDS             4095..5813
                     /locus_tag="U1021_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HEM4712438.1"
                     /translation="MTYQETYQTWLDFADLPDYLREELVAMDEKTKEDAFYTNLEFGT
                     AGMRGYIGAGTNRINVFVVRQATEGLAKLVESKGEEAKKRGVAIAYDSRHFSPEFAFE
                     SAQVLAAHGIKSYVFESLRPTPELSFAVRHYNAIAGIMVTASHNPKEFNGYKVYGEDG
                     GQMPPADADALTNFIRAIDNPFAVELADLEASKENGLITVLGEETDVKYLEELNDLNI
                     NPELIAEYGKDMKIVYTPLHGTGEMLARRALAQAGFESVQVVEAQATADPDFSTVASP
                     NPESQAAFALAEELGREVGADVLLATDPDADRVGVEVRQADGSYWNLSGNQIGAIIAK
                     YILEAHKQAGTLPANAALAKSIVSTELVTKIAESYGATMFNVLTGFKFIAEKIQEFEE
                     KHNHTYMFGFEESFGYLIKPFVRDKDAIQAVLMVAEIAAYYRSRGMTLADGIDEIFKE
                     YGYFAEKTISVTLSGKDGAEQIKAIMAKFRDNSPAQFNATDIAVFEDFALQTKTDKDG
                     NIEKLTTPPSDVLKYTLADDSWFAVRPSGTEPKIKFYIATVGETLAEAEEKISNIEKE
                     INEFVG"
BASE COUNT         1782 a         1304 c         1149 g         1688 t
ORIGIN      
        1 aaaaaatccg cctttgagcg gatttttcat attcttgtta gaacaagccg atagctgtcc
       61 catctgccgc cacatccatg ttgagagctg cgggagcttt tggcaaacca ggcatggtca
      121 tgacatctcc tgttaaggca acgataaagc ctgctcctaa ttttggaaca aattcacgga
      181 ctgtaatgtc aaagtctgtc ggcgctccaa gggcaaactg atcatctgag aaactgtact
      241 gggtcttggc catgcagact ggcaacttgt cccaaccatt cttagcaaat tcagtcagct
      301 ggttacgagc tttcttctcg aaaaccacac ctgagccacc ataaatctgc gtaacaatct
      361 tggtcacttt ctcttccaag ctatcctcag ccttgtaaag acgttggtag tttgctgctt
      421 gattttcaat agtagcaaca actgtctcag ccaattcaac accaccatca gcgccatttg
      481 cccaaacact tgccaactcg acaggtacgc caatttcagc gcaaagttcc ttcaacgcgg
      541 caatttcgtc agctgtgtca gatacaaatt cattgatagc aacgactgct ggaataccgt
      601 atttctgaat attttcaacg tgacgcttca agttagaaaa accagctttc actgcctcta
      661 cattttcagc agaaagttct gtcttggcta caccaccgtg cattttaagc gcacggtggg
      721 tagcaacaat gactactgca tccggagcct taggcaagtt cggcaccttg atatctagga
      781 atttctctgc tccaaggtct gcaccaaaac ctgcttctgt tacggtatag tcggccaaac
      841 gcagagctgt tgtagttgca agaactgagt tacagccatg agcaatatta gcaaatggac
      901 ctccgtggac aaaggctggc gtgccataga tggtttggac aaggtttggt ttaatagcgt
      961 ccttcaaaat aagagtcaaa gcaccttcca ccgccaaatc acgcacgtag acaggactgc
     1021 gatcgaaacg ataaccgata acaatatttg ccaaacgttc tttcaagtca ttgatgtctg
     1081 tcgccaagca taaaatcgcc atgatttcag aagctacggt aatatcgaat ccatcttcac
     1141 gcggaatacc attgagcgga ccacccaatc caacagttac tttacgcaaa gcacggtcat
     1201 taaggtccac gacccgtttc cagatgatcc tgcgttggtc aatgcctaca gcatttcctt
     1261 gatggatatg gttgtcaatc aaggctgaaa gagcgttgtt agctgtggta atggcatgca
     1321 tatcgcctgt aaaatgcagg ttgatatctt ccatgggcaa gacttgtgca aaaccaccac
     1381 cagcagctcc gcccttgatt cccataacag gccccaaaga aggctcacgg agggcaatca
     1441 tagttttctt tccaatttta gacaaagcat ccgccagacc aatggttact gttgacttac
     1501 cttcaccagc aggcgttggg ttgatagctg tcaccaagat caatttccct ggcgcattgt
     1561 ctttcaccgc attgatttta tcaaaggaca attttgcctt gtattttcca tagagttcaa
     1621 tatcgtcaaa gctgatacca actttttcaa cgatttctgt gattggtttc aaggttacac
     1681 tttgtgcaat ttcaatatct gttttcatga gagctcctaa tttccttatt ttttatggac
     1741 attataccat accacagctt attttcgcat attttttact atttatgcac taacgtacgg
     1801 aattttcaga aaaactacag gtttctttac ttaaacagat acaaattttt aaaacctgca
     1861 ttctcatcat agctctacac ttccatctaa gactgggttt agttagtttt ttcaaaagag
     1921 agtcagtatt cttttaaaaa ttgccttgat gagcaagcaa acgaccgctt gcataaagca
     1981 cttcacttat atagtctttt agtttacttt tagtacgagg caatgagccg caggcataac
     2041 tgaagttagg caaggcgagt taacgaagta ataaaagaaa aactaaatga cgataataca
     2101 ggcccttata tttttttgta ttagcagcat cattttccag tgtcacagat tgattagcaa
     2161 atcgattagt gcaaacttta cgaaaaatag aaattctagt aaaatatgaa catgaaacta
     2221 ttgattacat caggcggaac aagtgaagct atcgatcaag tccgcgctat tacaaaccat
     2281 gcttctggaa atcttggaaa aatcattgcc gaacaagcct tgaaacgcgg tcatgaagtt
     2341 actcttgtga ctacaagaca ggctgttaaa ccagattctc agaagaattt aaccattatc
     2401 gaaatcacaa atgttgatag tttgaaagaa acattagaac ctttagtcaa atcacatcag
     2461 gccctgattc atagcatggc tgtatccgat tatacacctg tttatatgac tggtttagat
     2521 gaactaagag caactgaaga cagttctagt ctactaaaaa aacagaatac agaaagtaag
     2581 atttcatcca aggatgacta ccaagttctt ttcttgaaaa aaactcccaa ggtcatttcc
     2641 tatgtaaaaa aatggaatcc agctatcaca ctctttggct tcaaactatt ggttaatgtt
     2701 cctaaggagg aattatttgc cgtagctcgc caaagcattg aacgaaatgg cgctgattat
     2761 atacttgcta atgacttgaa ggatattgga gaaaatcaac acattgccta tttggttgat
     2821 aaaacaaggg agattcaagc acagacaaaa gatgaaattg ctcagctcat tttaaatacc
     2881 ctagaaaaag gagaacaaaa tggctaatat cacacttgcc gttactggct ctatttcagc
     2941 ctacaaagca gctgacctaa ctagtcaatt gaccaagctc ggtcatcagg ttacagtcct
     3001 catgagtcgc tctgctatgg acttcatcac acctttgact ctccaatcct tgtcaaaaaa
     3061 tctggttcac acagatgtca tgattgaaga aaatcctact cttatcaagc atatcgatat
     3121 tgccaaagaa acagacgtat ttttagttgc ccctgcttct gccaatacga tagctaaatt
     3181 agctaatggt atggctgaca acattattac ggcaacagct ctggctctgc caattggtac
     3241 taaaaaactg ctggcacctg ctatgaatac taacatgtac ctcaatcctg ctacccagaa
     3301 aaatatcaaa accctcatag agtatggttt tgaggaaatc aaaccgcgtg aagccctgct
     3361 tgcttgtgga gattttggaa ctggggcctt ggctgaggta actgatattt tagagaaagt
     3421 gagtaacacc cttgatgaaa aaaaataaat caactcaaat tgctacaatt gcaatcttct
     3481 ttgctgtcat gattgtcatc aatatattga gttcaattat ttttaatata ttgcctgttc
     3541 caataaaacc caccatcgta catatcccag tcattattgc ttctattata tacgggccac
     3601 gtgttggggc ttgtttgggg gctctcatgg gcttaatgag tatgacccat aatactatta
     3661 tcttactacc aaccagctat cttttctccc catttgttga aaatggtaat gtttattcaa
     3721 tcatcattgc agttgtccca cgtatattag tcgggattac accttatttc gtctacaaat
     3781 ggataaaaaa tcgtaaagga ttatttattg ctggtgcaat tggttcaatg accaatacta
     3841 tttttgtact tggaggtatt ttcttcctct tctcctctgt ctttgatggt aatattcaag
     3901 caatgttagc aaccgtttta ggtaccaatt caattgcaga aatgatcatt tcttctgtat
     3961 taactgcagc gcttgttcca actttacaga aaattcaaaa ataaatatca gaaaatcatg
     4021 tgaaagcgtg atttttcttt tcaaacatgg tataatgaaa gcgtttaata gaaaaatttt
     4081 taaggagata tgcgatgact tatcaagaaa cctatcaaac atggctcgac tttgcggacc
     4141 ttccagatta cttgcgtgaa gaattagtcg caatggatga aaaaacaaaa gaagatgcct
     4201 tctatacaaa tcttgaattt ggtacagctg gtatgcgtgg ctatattggc gctggtacca
     4261 accgcatcaa cgtattcgta gtccgtcaag ctactgaagg tttggcaaaa ttggtagaat
     4321 caaaaggtga agaagctaaa aaacgtggtg ttgccatcgc ttacgattca cgtcacttct
     4381 cgccagaatt tgcttttgaa tcagctcaag ttttggcagc gcatggtatc aaatcttatg
     4441 tatttgaaag ccttcgtcca actcctgagt tgtcattcgc tgtgcgccat tacaatgcca
     4501 tcgcagggat tatggtgact gcaagccaca acccgaaaga attcaacggc tacaaggttt
     4561 acggtgaaga cggcggacaa atgccacctg ctgatgcaga tgcattgacc aactttatcc
     4621 gtgccatcga caatccattt gcagttgaat tggctgacct tgaagccagc aaggaaaatg
     4681 gtttgattac ggttcttggc gaagaaactg acgttaaata tcttgaagaa ctcaatgacc
     4741 tcaacatcaa ccctgaattg attgctgaat acggtaaaga catgaagatt gtctatacac
     4801 cgcttcatgg tacgggtgaa atgttggcgc gtcgtgccct tgcacaggct ggttttgaat
     4861 ctgtccaagt tgttgaagca caagcaactg ctgatcctga cttctctact gtcgcttcac
     4921 caaacccaga gagccaagca gcctttgccc ttgcagaaga actcggccgt gaagtcgggg
     4981 cagatgtcct tcttgcaact gaccctgacg ctgaccgtgt tggtgttgaa gttcgtcaag
     5041 ctgacggttc ttactggaac ctgtctggta accaaatcgg cgctatcatt gctaagtaca
     5101 tccttgaagc ccacaagcaa gcaggtacac ttcctgcaaa cgctgccctt gctaagtcaa
     5161 tcgtatctac tgagttggta actaagattg ctgaaagcta tggcgctacc atgttcaacg
     5221 tcttgactgg tttcaaattc atcgctgaga aaatccaaga gttcgaagaa aaacacaacc
     5281 atacttacat gtttggtttc gaagaaagct ttggctattt gattaaacca tttgtacgtg
     5341 acaaggatgc tatccaggct gtgcttatgg ttgctgaaat tgctgcctac taccgttcac
     5401 gtggcatgac cttagctgac ggtatcgatg aaatcttcaa agaatacggc tactttgctg
     5461 agaaaacaat ctctgttacc ctttctggta aggatggtgc agaacaaatc aaggcaatca
     5521 tggctaagtt ccgtgataac tcaccagcac aattcaacgc tactgacatc gcggtctttg
     5581 aagactttgc ccttcaaact aagacagaca aagatggaaa cattgaaaaa ctcactactc
     5641 ctccatcaga tgtcttgaaa tacaccttgg cagatgattc ttggttcgct gttcgtcctt
     5701 cgggaacaga accaaaaatc aaattctaca tcgcaaccgt tggtgaaaca cttgctgaag
     5761 cagaagaaaa aatctccaac atcgaaaaag aaatcaacga atttgttggg taagagtcac
     5821 ataaattaga aagttcaaac cacccgtcaa acaggtggtt tgaacaaggg ctataagccc
     5881 acatcaccag ccagtgccta aagacgctgg ctttcacttt gtt
//
LOCUS       DASFQD010000126         5911 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.127, whole genome shotgun sequence.
ACCESSION   DASFQD010000126 DASFQD010000000
VERSION     DASFQD010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5911
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.127"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            102..944
                     /locus_tag="U1021_001942"
     CDS             102..944
                     /locus_tag="U1021_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM4712439.1"
                     /translation="MTRYTFSNGVTVPKIGFGTWQIPDGEVAYGAVSYALEAGYRHID
                     TAQIYGNEASVGRAIADSGLAREDIFLTTKVWNDKIGYEDTLASVEESMQKLQVDYLD
                     LLLIHWPNPKAIRDSIGWKERNAQVWKALEELYRAGKVKVIGVSNFMEHHLEALLETA
                     EIIPMANQIMLAPGTPQSELVAYCKAKGILLEAYSPFGTGSLFQSQEAADLAKEAGCS
                     VAQLALAWSLDKGFLPLPKSTSPENIKANLEIDGLAISPTAVAKLDKLEGVKGRLDPD
                     QAEF"
     gene            1026..3182
                     /locus_tag="U1021_001943"
     CDS             1026..3182
                     /locus_tag="U1021_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HEM4712440.1"
                     /translation="MEEKYLKIAQELGVSLKQIDTVLSLTAEGNTIPFIARYRKDVTG
                     NLDEVVIKSIIDRDKALTALADRKATVLAKIEEQGKLTDQLRQAIEEAEKLADVEELY
                     LPYKEKRRTKATVAREAGLFPLARLILQNVADLEEQAASFICEGFDTAQACLAGAVDI
                     LVEAISEDNKLRAWVYHEVQTNSNLTSELKDQEADEKEVFQIYYDFSEKVAKMQGYKT
                     LAINRGEKLGVLKVTFEHNVDKMVRFFELRFPQTNSYIKDVIQQAIKKKILPAMERRI
                     RTELTEEAEEGAIQLFSKNLRNLLLVSPLKGKVVLGFDPAFRTGAKLAVVDQTGKLLT
                     TQVIYPVEPAGQRQIAQAKKDLADLIGQYQVEIIAIGNGTASRESEAFVADLLKDFPD
                     VSYVIVNESGASVYSASELARYEFPDLPVEKRSAISIARRLQDPLAELVKIDPKSIGV
                     GQYQHDVNQKSLSESLDFVVDTVVNQVGVNVNTASPALLAHVAGLNKTISENIVKYRE
                     ENGALTSRQQLKKVPRLGDKAFEQAAGFLRISDATNFLDNTGVHPESYKAVENLLELL
                     AIDHLDEAAQEKLKQVTIADTAEKIGVGQETLKDIVADLLKPGRDLRDDFEAPVLRQD
                     VLDVKDLVVGQELQGTVRNIVDFGAFVDIGVHEDGLVHISRMVKRKRDKNGRQQALPH
                     PSEVLAVGEIVTVWVVEVDIKRNRIGLSLLKPNGSE"
     gene            3169..3594
                     /locus_tag="U1021_001944"
     CDS             3169..3594
                     /locus_tag="U1021_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000778579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family protein"
                     /protein_id="HEM4712441.1"
                     /translation="MDLNKYVQEVSLQDFGKEFQHVAIWNRRLRSTGGRFFPRDGHLD
                     FNPKHLEEQGLEVFRKIVRHELCHYHLYFEKKGYRHGDRDFKELLAAVDGLRYAPKLE
                     QAAKPSLLYTCQSCGQVYQRKRRIDLKKYRCGKCRGNLL"
     gene            3672..4433
                     /locus_tag="U1021_001945"
     CDS             3672..4433
                     /locus_tag="U1021_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712442.1"
                     /translation="MTQKREERLIELYEKGVLTKEEARACFKEMNQEPDFLFVEEKVK
                     LNFTLPSFKVFASSKLKQSYSFEGIESLFLKLSEGRLTLAKSKNNQISVEICYNQDAP
                     EDRLPHLYVEKKCLYFSSGLACRLTISLPQEWMSVLDLELGQADARLDYLPFEDISIR
                     SSRDKKQQDIRLTTCGGYPQHLYVQLAQAPLTLHTGKGQGIRGQIESQSGHVLVNRRK
                     KNSPYQFEKSGNDLLFLKVQTGQGGFYVKGIKDVN"
     gene            4423..4695
                     /locus_tag="U1021_001946"
     CDS             4423..4695
                     /locus_tag="U1021_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HEM4712443.1"
                     /translation="MSIELYKVRQGKIVSGVLAGIAHKLGWESWVTRAIFIAGLLLGK
                     SFLLLIALYIAAAYFLPYKEDRDAERYGTGPRKIKEAEKINKSWFE"
     gene            complement(4845..5786)
                     /gene="manA"
                     /locus_tag="U1021_001947"
     CDS             complement(4845..5786)
                     /gene="manA"
                     /locus_tag="U1021_001947"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase, class I"
                     /protein_id="HEM4712444.1"
                     /translation="MEPLFLTPVMHEKIWGGNRLRTNYHYDIPSDKTGECWAISAHPN
                     GVTTVSNGQYKGRGLDDLYKNEKHLFGNPTDDVFPLLTKILDADDWLSVQVHPDDSYG
                     LAHEGELGKTECWYILEAEDGAEIIYGHNAQSKEELRQQIEAGDWDKLLTHVPVKKGD
                     FFFVPSGTMHAIGKGILILETQQSSDTTYRVYDFDRRDDAGNLRELHIEKSIDVLTIG
                     PVANSTPAHLKAGNLDSTLLVANPFFTVYKWNIQQEIKMEQTVPYLLVSVIEGEGTIQ
                     VGETSYPLQKGSHFILPADVTDWTFTGQMDIIASHTN"
BASE COUNT         1640 a         1142 c         1454 g         1675 t
ORIGIN      
        1 tgagcagaca ctttcgggtg tcttttattt ttaggtcgca ttattttgta ttgattgaca
       61 atttagttta tactggggat agaagaaata ggaggtcttt tatgacaaga tatacgtttt
      121 caaatggtgt aactgttcct aaaattggtt ttggaacttg gcagataccc gatggtgaag
      181 tggcgtacgg tgcggtttct tatgcattgg aagctggtta tcgccatatt gatactgctc
      241 aaatttatgg caatgaagct agtgttggtc gagctatagc tgatagtggc ctagctcgtg
      301 aggacatttt tttaacaact aaggtttgga atgataagat tggctatgaa gatacccttg
      361 cgtcagtaga agaatccatg caaaaacttc aggtggatta tctggatttg ttactgatcc
      421 attggccaaa tccaaaggct attcgcgaca gcattggctg gaaggaacgc aatgcccaag
      481 tttggaaggc attagaagag ctctatcgtg ctggaaaagt gaaagtaatt ggagtttcta
      541 actttatgga acatcatcta gaagctttgc tggaaacggc tgagattatc ccgatggcta
      601 atcagattat gttagctcca ggaactcctc agtcagaatt agttgcttac tgcaaagcca
      661 aagggattct cttggaggcc tatagcccat ttggtacagg aagccttttc caaagccaag
      721 aagcagctga tttggctaaa gaagctggtt gtagtgttgc acagttagcg ttggcttggt
      781 ctttagataa aggctttctc cctctcccga aatcaactag tccagaaaat attaaggcga
      841 atttggaaat tgatggcttg gctattagtc cgacagcagt tgcaaagttg gataaactag
      901 aaggagtaaa aggtcgactt gacccggatc aggctgaatt ttaattagct attgagagca
      961 tgtagtttat ctacgtgctt tttctattga gtcatttgta ccgctttcat gctataatag
     1021 tagctatgga agaaaaatat ttgaaaattg ctcaggaatt gggcgttagt ttaaaacaga
     1081 ttgatacggt tctctctttg acggctgaag gcaacaccat tccctttatc gctcgttatc
     1141 ggaaggatgt gacggggaac ttggacgagg tggtcatcaa gtctattatt gatcgggata
     1201 aggccttgac tgctctcgct gaccgtaagg ctactgtcct tgccaagatt gaagaacaag
     1261 gaaaattgac agaccagctc cgtcaggcta tcgaggaagc ggaaaagttg gcagatgtgg
     1321 aagaactcta cctgccttat aaggaaaaac gtcggaccaa ggcaacggtg gcgcgtgagg
     1381 ctggactgtt cccgctggct cgtctaattt tgcagaatgt ggctgacttg gaagaacagg
     1441 ctgctagttt catctgtgaa ggttttgata ctgctcaggc ttgtttggct ggggctgtgg
     1501 atattttggt cgaagctatc tcagaagaca ataagcttcg ggcctgggtc taccatgaag
     1561 tacagaccaa ttcaaacctt acttcagagc taaaagatca agaagcagat gaaaaagaag
     1621 tctttcagat ttattatgat ttctctgaga aagtggcaaa aatgcagggc tataagactt
     1681 tggccattaa ccgtggtgag aaattaggcg ttctaaaggt tacttttgaa cacaatgtgg
     1741 ataaaatggt tcgtttcttt gagctacgtt ttccacagac caatagctat atcaaggatg
     1801 tgatccagca ggctattaag aagaaaattc tacctgccat ggagcgccgt attcggacag
     1861 aattgacaga agaagcagaa gaaggtgcta tccagctctt ctctaaaaac ctacgaaatc
     1921 tgctccttgt atctcccctc aaaggcaagg ttgtccttgg ttttgaccct gcctttcgaa
     1981 caggggctaa gttggcggtt gtagaccaga ctggaaaact tttgactaca caagtcatct
     2041 atccagttga gccggctggt cagcgacaaa ttgctcaggc aaaaaaagac ttggcagacc
     2101 tgattgggca ataccaagtg gaaatcattg ctatcggaaa tggaacggcc agccgtgaat
     2161 cggaggcttt cgtcgctgat ttgctcaagg atttccctga tgtttcctat gtcatcgtca
     2221 atgaaagcgg agcctctgtc tactcagctt ctgaactggc cagatatgag tttccagacc
     2281 tccctgtgga aaaacgctct gccatttcca tcgcccgccg tctgcaagac cctctggctg
     2341 agctggtcaa aatcgatcct aagtccatcg gtgtcggcca gtaccagcac gatgtcaacc
     2401 agaaatctct gtctgaaagt ctggactttg tggttgatac ggtggtcaac caggtcggtg
     2461 tcaatgtcaa tacggccagt cctgcccttt tggctcacgt tgctggtctt aacaagacca
     2521 tttcggagaa catcgtcaag taccgcgagg aaaatggtgc tctgacctct cgtcagcaac
     2581 ttaaaaaggt gcctcgtctg ggtgacaagg cctttgagca ggcagctggt ttcttgcgca
     2641 tctcagatgc gactaatttt ttggacaata ctggcgtgca ccccgagtct tacaaggctg
     2701 tggaaaacct gttagaactt ctagctattg accacttaga tgaggctgcg caggaaaaat
     2761 taaagcaggt gaccatcgca gatacggcag aaaaaatcgg tgttggtcag gaaaccttga
     2821 aggacatcgt cgcagacttg ctcaagccag gtcgtgattt acgggatgac tttgaagcac
     2881 cagtcctccg tcaagatgtc ttggatgtca aggatttggt agttggacag gaattgcaag
     2941 gtacggttcg caatattgtg gactttggag cctttgtgga tatcggtgtc cacgaagatg
     3001 gtctggtcca catttcacgc atggtcaaac gtaaacggga taaaaatgga cgccaacaag
     3061 ccttgccaca tccaagcgaa gtcctcgccg ttggggaaat cgttactgta tgggtggttg
     3121 aagtggatat caaacgtaac cgaatcggtc ttagcctttt gaaaccaaat ggatctgaat
     3181 aagtatgtgc aagaagtctc cttgcaagac ttcggtaagg aatttcagca tgtagcaatc
     3241 tggaacaggc gattacgctc aacgggtggt cgcttttttc caagggatgg gcatttggat
     3301 ttcaatccca agcatttgga ggagcaaggt ttagaagtct ttcggaagat tgtccgccac
     3361 gagctctgcc actaccatct ctactttgag aagaaaggct atcggcacgg agacagggat
     3421 ttcaaggaat tgttggctgc ggtggacggc ctgcgctatg ctcccaaact ggaacaagct
     3481 gccaagccta gtctgctgta tacctgtcaa tcctgtgggc aagtctacca gcgcaagcgt
     3541 cgcattgatc taaaaaaata ccgatgtggc aagtgtaggg gaaacttact ttgaaagaat
     3601 agagaatcag tcttcgggct gatttttttg tggagaaatg tgatatacta gagtagaatt
     3661 gaggtgagtc tatgacgcaa aagagagaag aacgcttaat tgagttatat gaaaaaggtg
     3721 tcttgaccaa ggaagaggcg cgtgcctgtt ttaaggaaat gaaccaagaa ccagactttc
     3781 tttttgtgga agaaaaagta aaattgaatt ttaccttgcc aagttttaag gtctttgctt
     3841 cctccaaatt gaaacaatcc tatagttttg aagggattga atcactcttt ttaaaattat
     3901 ctgagggacg tctaactttg gctaagtcta aaaataatca gattagtgtg gagatttgtt
     3961 acaatcagga tgcacctgaa gatagacttc ctcatcttta tgtagaaaaa aaatgcctct
     4021 atttcagcag tggcttggcc tgtcgtttga caatcagctt gccacaggaa tggatgtccg
     4081 tattggactt ggagttgggg caggccgatg ctcgcttgga ttacttacca tttgaagata
     4141 tttctatccg cagttcaagg gataaaaaac aacaggatat tcgcttgacg acttgcggtg
     4201 gttatcccca acacttgtat gtgcaactag ctcaggctcc cttgacttta cacactggca
     4261 aaggccaggg aattcggggg cagattgagt cgcaatcagg tcatgtcttg gttaaccgga
     4321 gaaagaaaaa tagtccctat cagtttgaaa aatctggcaa tgatttactt ttcttgaagg
     4381 tacaaacagg tcaagggggc ttttacgtga aaggaataaa agatgtcaat tgaattgtat
     4441 aaagtaaggc aggggaagat agtatctggg gttcttgccg gcatagcgca taaattgggc
     4501 tgggaatcct gggtaacacg cgcgatattt attgcaggtc tcctcttagg caaatccttc
     4561 ctccttctga ttgctctcta tattgcagca gcttattttt taccatataa ggaagatagg
     4621 gacgcggaac gctatggaac aggtccacgt aagataaaag aagcagaaaa gataaataag
     4681 tcttggtttg aataatgcaa aaaaaaactt gagtttaaag gctcaagttt tttgtatgct
     4741 tatactcaat gaaaatcaaa agtagcctag gaaacgaagt cgaagataga acttgagttc
     4801 atcaaggcaa gttgacaacg gataattttg attttcgaag agtattagtt tgtgtggctt
     4861 gcgatgatgt ccatttgtcc tgtaaatgtc cagtctgtca catcggctgg taagataaag
     4921 tggcttcctt tttgaagtgg gtagctggtt tcaccgactt ggatggtacc ttccccttca
     4981 atgacactga caagcaggta aggaactgtc tgttccattt taatttcttg ttggatattc
     5041 catttatata cggtaaagaa gggattggca accagaagtg tcgagtcaag attgcccgct
     5101 ttgaggtggg caggtgtgga gttagcaaca ggtccgatgg tcagtacatc aatcgatttc
     5161 tcaatgtgta gttcacggag gttgcctgca tcgtcacggc ggtcaaaatc atagacacgg
     5221 taggttgtat cactagattg ttgggtttct aaaatcagga ttcccttacc gatggcgtgc
     5281 atggtgccgc ttggtacaaa gaagaaatca ccttttttga cgggtacatg ggtcaacagc
     5341 ttgtcccaat ctccagcttc gatttgctga cggagttctt ctttggattg ggcattatgg
     5401 ccataaatga tttcagcccc atcttcggct tccaaaatgt accaacattc tgtcttgccc
     5461 agttcccctt cgtgagccaa gccatagcta tcatcgggat ggacttggac gctaagccaa
     5521 tcgtctgcat caaggatttt tgttaataat ggaaagacat catctgttgg attgccaaat
     5581 aaatgttttt cattcttata gaggtcatcc agtcctctcc ctttatattg accgtttgag
     5641 actgttgtta cgccatttgg atgggcagaa atagcccagc attcaccagt cttatcacta
     5701 ggaatgtcgt agtggtagtt ggttcttagg cgattgcccc cccaaatttt ttcgtgcata
     5761 acaggtgtga gaaacaatgg ttccatgatt ttctccttag tagtaagtat tgatctatat
     5821 aaagtataac agatttgtta gaaatatgta gcactgggag ggaagtgcat ttaatctgta
     5881 gaagttttgc taattttgtg agaaaaagaa a
//
LOCUS       DASFQD010000127         5804 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.128, whole genome shotgun sequence.
ACCESSION   DASFQD010000127 DASFQD010000000
VERSION     DASFQD010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5804)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5804)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5804
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.128"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(23..574)
                     /locus_tag="U1021_001948"
     CDS             complement(23..574)
                     /locus_tag="U1021_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002268947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HEM4712445.1"
                     /translation="MTKALISIDYTIDFVADEGKLTAGKSAQAISERIAQVTQEAFEN
                     GDYIFFAIDGHEEGDGFHPEAQLFPSHNIIGTQGRDLYGPLADFYQKHKGHARVRWMD
                     KRHYSAFSGTDLDVRLRERGVDTVVLTGVLSDICVLHTAIDAYNKGYRIEVVSSAIAA
                     LTEENHQFALNHLRHVLGATIID"
     gene            complement(576..1364)
                     /gene="codY"
                     /locus_tag="U1021_001949"
     CDS             complement(576..1364)
                     /gene="codY"
                     /locus_tag="U1021_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016399190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-sensing pleiotropic transcriptional
                     regulator CodY"
                     /protein_id="HEM4712446.1"
                     /translation="MTTLLEKTRNITSILKRSEEQLAEELPYNAIAEHLSAIIDCNSC
                     IINSEGEVLGYHMNYETNNDRVEEFFQNKQFPEGYVKAVAQVYDTQVNLPVESELTAI
                     PVESRSTYPNGLTTIAPIHVTGIRFGSLIIWRNDEQFHDDDLILVEIAATVVGIQLLN
                     FQREEDEKNIRRRAAVNMAVNTLSYSEMKAVAAILGELDGNEGQLTASVIADRIGITR
                     SVIVNALRKLESAGIIESRSLGMKGTYLKVLIPAIFDEIKKRDY"
     gene            complement(1516..2730)
                     /locus_tag="U1021_001950"
     CDS             complement(1516..2730)
                     /locus_tag="U1021_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011836593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM4712447.1"
                     /translation="MKQFNKSTKLDDVAYDIRGPVLEEAMRMRANGEQILRLNTGNPA
                     EFGFTAPDEVIRDLIHNARKSEGYSNSKGIFSARKAIMQYCQLKKFPNVDIEDIYLGN
                     GVSELIVMSMQGLLDNGDEVLVPMPDYPLWTAAVSLAGGKAVHYVCDEAAEWYPDLAD
                     MESKVTSRTKAIVLINPNNPTGALYPKEILEGIIDIARRHELIIFSDEIYDRMVFDGA
                     VHIPIATLAPDLFVVTMNGLSKSHRICGFRVGWMVLSGPKKHVKGYIEGLNMLSNMRL
                     CSNVLAQQVVQTSLGGYQSVDELLMPGGRLYEQREFITKAINDIPGLSAVKPKAGLYV
                     FPKIDREMYRVEDDEQFVLDFLKQEKVLLVHGRGFNWKDPDHFRIVYLPRVDELAEIQ
                     EKMSRFLRQYRR"
     gene            2885..3337
                     /locus_tag="U1021_001951"
     CDS             2885..3337
                     /locus_tag="U1021_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015445117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEM4712448.1"
                     /translation="MTQSYKTILVAVDGSKGAELALHKAIHVALRNQARLIIAHVIDT
                     RALHNVIAFDASVYESLEREAELLLEEYKQEALNAGLTDVQIRIEFGNPKTLLAIDIP
                     KETGADLMLLGATGLNAFERLLIGSSSEYIMRHATIDLLIVRDGEKSL"
     gene            complement(3353..3871)
                     /locus_tag="U1021_001952"
     CDS             complement(3353..3871)
                     /locus_tag="U1021_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4712449.1"
                     /translation="MFQSKDDNFNRVKDFHFLMDGETQELPSVYDGQTALHRAGFKVE
                     ELVEFLHAASESEVEFHDFIQQLHQDLDTAVAKVSGKRGFGVSMHDQVDALLDILYFT
                     YGSFVLMGVDPEPIFQIVHTANMGKTFPDGKAHFDPITHKILKPDDWEERFAPEEKIQ
                     EELKRQMKRLDS"
     gene            complement(3873..4718)
                     /locus_tag="U1021_001953"
     CDS             complement(3873..4718)
                     /locus_tag="U1021_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM4712450.1"
                     /translation="MTIKAVFFDIDGTLLTDNRMVSSLTILAINALKEKGILVGLATG
                     RDPRFVLQYMASLGLDLVIAYNGQYIFSREEVIYSQSLEPKQIEQIMEYAQTHHKDLS
                     FGTAKGIFGSKIMSAGTGNFAYRVTRMIPESWAGIINFIFNRLVRWISPQQETNLKGF
                     LFQPIYQLMLLTTERETQSLEVLFPNLSFTRSSPYATDIISKGNSKLSGIVKVADRYG
                     FELDEVMVFGDSNNDFEMLNEIQHSVAMGNGTKKVKQAASFVTDTNNRDGIYKALIHF
                     GVIEG"
     gene            4788..5747
                     /locus_tag="U1021_001954"
     CDS             4788..5747
                     /locus_tag="U1021_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEM4712451.1"
                     /translation="MKKILVLHTGGTISMQANHQGEVASSKINPMTQIDSPLEEIQVT
                     SLDFLNVPSPHIRLEHMMTLYQKIKEEQMNFDGFVITHGTDTLEETAYFLDTMAIPEK
                     PIVLTGAMRSSNELGSDGIYNYRTALRVAADAKSADKGVLVVMNDEIHAAKYVTKTHT
                     TNVSTFQTPTHGPLGLVTKREILYFKTAEPRVRFDLSTVTGTVPIIKAYADMDSILLD
                     SLTASSISGLVIEALGAGNLPPTIIPAIKKLLDQKIPIILVSRCFNGIAEPVYAYQGG
                     GIQLEQDGILFVKELNAQKARLKLLIALNADLEEQSLADYIQG"
BASE COUNT         1859 a         1399 c          916 g         1630 t
ORIGIN      
        1 tttcccactc cacactatac tattagtcaa taattgtcgc accgagtaca tgacgcaaat
       61 ggttaagagc aaactgatga ttctcctccg tcaatgcagc aatggctgat gagaccacct
      121 caatacgata ccccttatta taagcatcaa tagctgtatg aagaacacaa atatcagaca
      181 aaacacccgt caagacaacc gtatctacac cacgctctct tagtcgaaca tccaaatccg
      241 tcccagaaaa agcagaataa tgacgtttat ccatccaacg aacacgcgca tgccctttat
      301 gtttttgata aaaatctgct aaaggaccat acaagtctcg cccttgcgtc ccaatgatat
      361 tatgacttgg gaaaagctga gcttcaggat gaaatccatc cccctcctca tgaccatcaa
      421 tcgcaaagaa aatatagtct ccattttcaa aagcttcttg cgtaacctga gcaattcgtt
      481 cagaaatagc ctgagctgat tttccagcag tcaactttcc ttcatctgcc acaaaatcta
      541 ttgtataatc aatcgaaatc aatgcttttg tcattttagt agtcacgttt cttaatttca
      601 tcaaaaatag ctgggataag aactttcaaa taagtcccct tcattcccaa agaacgactt
      661 tcaataatcc ctgcactctc caacttacgc agtgcattca caatcaccga gcgtgtaata
      721 ccgatacgat ctgcaatcac agaagcagtc aattgcccct cattgccatc caattcaccc
      781 aaaatagctg caactgcctt catttctgag taagacagcg tatttaccgc catattaact
      841 gccgcacgac gacggatatt cttctcgtct tcttcccgtt ggaaattaag taactgaata
      901 ccaactaccg ttgccgcaat ctcaaccaaa atcaaatcat catcgtgaaa ctgctcatca
      961 tttcgccaaa taataagcga accaaaacga attcccgtca catggatagg cgctatcgtt
     1021 gtcagaccat ttggataagt cgatcttgat tcgacaggga tggcagtcaa ctcgctctcg
     1081 acaggcaaat taacctgcgt atcgtaaacc tgcgcaactg cttttacata tccttctggg
     1141 aattgtttat tttgaaaaaa ttcttccaca cgatcattgt tcgtctcata gttcatgtgg
     1201 tatcccaaaa cttcaccttc actattaatg atgcacgagt tgcagtcaat aatagctgat
     1261 aaatgctcag caatggcatt gtaaggcaat tcttctgcca attgctcttc ggaacgcttc
     1321 aaaatagaag taatattccg tgtcttctct aataatgttg tcatattttc ctctttactc
     1381 tgtaattgct ttcagtatag caaaaaatac ataaaatttc aacaattatc agaatattta
     1441 ccgttgttag aaaaatacaa acaattccat tcaagtaaaa agaaaaggct gattaacatt
     1501 cagcccaaaa ttccattacc tacgatattg ccgcaagaat cgtgacattt tttcttgaat
     1561 ttctgccaac tcatccacac gtggtaaata cacaatacgg aaatgatctg gatccttcca
     1621 gttaaaacct cgaccatgga ccaaaagtac tttttcttgc ttgaggaaat ccaatacaaa
     1681 ttgttcatca tcctcaactc ggtacatctc acgatcaatt ttggggaaga catacagacc
     1741 agccttaggt tttacagcag aaagccccgg aatatcatta atcgccttgg taataaactc
     1801 cctttgttca tataagcgtc caccaggcat caagagttca tcaaccgatt ggtagcctcc
     1861 caaagaagtt tgaacaacct gttgagccaa aacgtttgaa cacaaacgca tattggacaa
     1921 catattcaag ccttcaatgt aaccttttac atgctttttc ggaccagata agaccatcca
     1981 acctactcgg aaaccacaaa tacgatgcga tttagacagt ccattcatcg tcacaacaaa
     2041 taaatctgga gccagtgtcg caatagggat atgaacagct ccgtcaaaga ccatacgatc
     2101 ataaatctca tcagagaaaa taatcaattc atgtctacga gcaatatcaa tgattccttc
     2161 taaaatttct ttcggataga gagcaccagt tggattattt ggattgataa ggacaattgc
     2221 tttggttcga gaagtcacct tggactccat atctgccaaa tctggatacc attcagctgc
     2281 ttcatcacaa acatagtgaa cagctttacc accagccaaa ctaactgcgg cagtccagag
     2341 aggatagtct ggcattggca ccaacacctc atcaccatta tctagcaaac cttgcataga
     2401 cataacaatc agctcactca cgccgtttcc aagataaata tcttcaatgt caacatttgg
     2461 aaatttcttt agctgacaat actgcatgat agccttacgt gcagaaaaaa ttcccttact
     2521 attcgaatat ccctctgatt tacgggcgtt atgaatcaag tcacgaataa cttcatctgg
     2581 agcagtaaaa ccaaattctg caggattccc cgtattcaaa cgtaaaatct gctctccatt
     2641 ggcacgcata cgcatggcct cttccaaaac aggcccacga atatcatatg ctacatcatc
     2701 caattttgtt gacttgttaa attgcttcat gtcgtcacct cgactttcta tcttttctat
     2761 tgtactgtaa aagctaaaaa agtacaagaa tcctttacat tttctctcaa aaggcttata
     2821 ataaaaatgt aaggaactac tctacctatt tcgggacaaa gctcttctga aaggagttat
     2881 tattatgaca caatcttaca aaaccatact cgtcgctgta gacggctcta aaggagcaga
     2941 attagctctt cataaagcta ttcatgtcgc actacgcaac caagcacgtc tgattatcgc
     3001 ccatgtgatt gacacccgtg ctctccacaa tgttattgca tttgacgcct ctgtctatga
     3061 atctttagaa agagaggcgg agctcctcct cgaagaatac aaacaagaag ccctcaacgc
     3121 tggtctgacc gatgtacaaa ttcgcatcga atttggtaac cctaaaaccc tattggctat
     3181 cgatattcca aaggaaaccg gtgctgatct tatgttactt ggggcaactg gtctaaatgc
     3241 ctttgaacgt ctcctgatcg gatcctcatc cgaatatatc atgcgccacg caactatcga
     3301 tttactcatt gttcgcgatg gagaaaaaag tttataaacc aaaagacttg atttacgaat
     3361 caagtctttt catctgtctt ttcagctctt cctgaatctt ttcctccggc gcaaaccgtt
     3421 cttcccaatc atcaggtttt aaaattttat gggtaatcgg atcaaaatgg gccttcccat
     3481 ctggaaatgt tttccccata tttgcagtat ggactatctg aaaaattggt tctggatcaa
     3541 cccccatcaa aacaaacgaa ccatatgtaa aataaagaat atccagcaaa gcatctacct
     3601 gatcatgcat cgaaaccccg aaacctctct tgccagatac cttagcaaca gcagtatcta
     3661 aatcctgatg aagttgttga ataaaatcat gaaactcaac ttcagattct gaagctgcat
     3721 gtagaaattc taccaactcc tccactttaa aaccagcgcg atgcaaagcc gtctgtccat
     3781 catacacact gggaagttct tgggtttcac catccattaa aaaatgaaaa tcctttaccc
     3841 tattaaaatt atcgtccttg ctctgaaaca tcttatccct caatcacacc aaaatgaatt
     3901 aatgccttat aaatcccatc acgattattt gtatctgtaa caaaggaagc tgcttgtttc
     3961 acctttttcg tcccatttcc catcgctacc gagtgctgaa tttcattcaa catttcaaaa
     4021 tcattattag aatccccgaa taccataact tcatctaact caaaaccata ccgatctgca
     4081 acctttacaa tacccgataa ttttgaattt cccttactga taatatcagt cgcataggga
     4141 ctcgaacgcg taaaagacaa gttcggaaag agcacctcca atgattgtgt ctccctttcc
     4201 gtcgtcagca acatcagctg atagattggt tgaaagagaa aacctttcaa attcgtttcc
     4261 tgttgaggac taatccaacg taccaagcga ttgaaaataa agtttatgat tccagcccag
     4321 gactccggaa tcatacgcgt cacacgatag gcaaaatttc ctgttccagc actcataatc
     4381 ttactaccaa atatgccttt agcagttcca aaagataaat ccttatggtg agtttgcgca
     4441 tactccataa tttgttcaat ttgctttggc tctaaactct gactataaat aacttcttct
     4501 cttgaaaaaa tatattgacc attataagca atgaccaaat ctagccctaa actagccata
     4561 tactgcaaaa caaaacgagg gtcacgtcct gtagctagac caactaaaat ccccttctct
     4621 ttcaaagcat taatggcgag aatagttaaa ctactaacca tacgattgtc ggtcaataag
     4681 gtaccatcaa tatcgaaaaa tacagccttt atcgtcaacc aactcaccta ctttctaaga
     4741 attatgttac aattagtata tcacactttg aaagaaactg aaaatttatg aaaaaaattc
     4801 tagtactgca tacaggtgga accatttcta tgcaagctaa tcatcagggt gaagttgcat
     4861 cgagtaaaat caatccaatg acccaaattg atagcccact agaagaaatt caagtgacat
     4921 ccttggattt tctcaatgtt ccaagtccac acattcgctt agaacacatg atgactctat
     4981 accaaaaaat caaagaagaa caaatgaact tcgatggttt tgtcattaca catggcacag
     5041 atactttaga agaaactgcc tatttccttg atacaatggc tattccagaa aaaccaattg
     5101 tattgaccgg agctatgcgt tcctcaaatg aactaggtag cgacgggatt tataactacc
     5161 gaacagccct acgtgtggct gctgatgcta aatccgcaga taaaggtgtt ctagtggtca
     5221 tgaacgatga aattcatgct gctaaatatg ttacaaaaac ccataccacc aatgtctcaa
     5281 cctttcaaac accaacccat ggaccactgg gattagtcac caaacgagag attctctatt
     5341 ttaaaactgc tgaaccacgt gttcgatttg acttatcaac agtcacagga acggttccaa
     5401 tcataaaagc ttatgcagat atggactcca ttctccttga ttctctcact gcaagctcaa
     5461 tttccggttt agtcattgaa gcactcggcg ccggaaatct tccgcctacc atcattccag
     5521 ccattaagaa actccttgat caaaagatac ccattattct ggtatctcgc tgttttaacg
     5581 gaattgctga gcctgtctat gcctaccaag gaggtggcat ccaactggag caagacggca
     5641 ttctatttgt taaagaattg aatgctcaaa aagcccgact caaactcctt atcgctctca
     5701 atgcagactt agaagagcaa agcttggcag attacatcca aggttaatcg ctgacgaact
     5761 attcaatatg tcaaaagacc aacacatgtg tgttggcctt tttt
//
LOCUS       DASFQD010000128         5777 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.129, whole genome shotgun sequence.
ACCESSION   DASFQD010000128 DASFQD010000000
VERSION     DASFQD010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5777)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5777)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5777
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.129"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            159..1919
                     /locus_tag="U1021_001955"
     CDS             159..1919
                     /locus_tag="U1021_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003108409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICBA"
                     /protein_id="HEM4712452.1"
                     /translation="MENTSIRVRLQKLGTTLSNMVMPNIGAFIAWGVLTSLFIPTGWL
                     PNETFATIVGPMIKYLLPLLIGYTGGYNVYGQRGGVMGAILTMGVIEGSSVPMFIGAM
                     VVGPFGAWVIKKFDQAIQPKIRPGLEMLVNNFSAGLIGFVLMLVTFKVVGPFVESMTG
                     VVGDGVQAIVDMKLLPLANIIIEPAKVLFLNNALNHGIFTPLGTEQVLEAGKSVLFLL
                     EANPGPGLGILLAYAFFGKGSAKSSSWGAMVIHFLGGIHEIYFPYVLMKPALFLAAIA
                     GGVSGTFVFQTLGAGLAGAASPGSIIAVTLMLPKGDNTFGNALAVYAGVFAGALASFL
                     VASIILKADKSEGESLEAAQAATKAAKAVAKGQAVETVAAEISANSVKQIIFACDAGM
                     GSSAMGASLLRDKVKKAGLDIPVTNKAIANLQDTEYTLIVTQQELADRAAQRTPRAIH
                     VAVDNFLTSPKYDEIVAKLVGQAQEVSPRQVSLDAEAEVDLNYIDEVVFAYGQAQGSA
                     TMGQATLAAIFKNKGIGIPVATVPYDKLTEHNAKNILVVTTIAQQAEVQQVAPNAQLL
                     VVDSLVTTPEYDKIVARMHK"
     gene            1949..3901
                     /locus_tag="U1021_001956"
     CDS             1949..3901
                     /locus_tag="U1021_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019804801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HEM4712453.1"
                     /translation="MLLTKREEQLMKAFLQVGKLSLKEMADILQVSSRTVYRTLSDLT
                     DFLIEHEIDLVKDGKKYYLSGDLSALEDYKTLDSYSPSQRLELMIYQLLTSQEVITNE
                     QFQEQFLVSNVTVIQDIAVIEKRLSDFDLCLVRHKGYGIEGTNSQKRRLLAILLANAI
                     AIQDFWQDNYDNYPSLDKEVVEESRRAFESHQTVLGDIDSKLKQLLIILLSLADNQGE
                     LDHRVGVSKEALDFSQKVFMRLAQASKRFYSIQEIIFFASILDELIIKRQEVPLFRES
                     FDSSFYYNISQLIDSVSRFTKIDFIKDRLLFPLLFNHIRLSLAVPMLFPDHATTNVAY
                     LATQKNPFLHRLVSLVIQDIFPTYLHNEYEYELVTLHFASSLRRSPDIYPIRLLLVTD
                     ERPLTTSVLVSKIKNIAPFVEWIDVQSTTNLSQLNLEHYDYCLTTKPVGQDGLDLIST
                     FPNTQEILDLQETLQAIQENRTVLIREDIKEENHCDLQAYLKASSQVLQSFRLIHLGQ
                     QTSFDEAVVATVGELDHVADRAYLADKLLTRFAVSPLAIPQTNLALIHTQSSQVRHSQ
                     FVIVELENSVSALSMNNQQEAVQRILVMLTPLGVEAEVRELMTAISQSIIENKLYTEI
                     YRTGNQEIIYQLLNSIFTETIKKLEK"
     gene            3903..4340
                     /locus_tag="U1021_001957"
     CDS             3903..4340
                     /locus_tag="U1021_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012961912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM4712454.1"
                     /translation="MELQQNLIKLNQAFTTKEEAIRYCGHQLVQAGHVNEAYIEAMIE
                     RNQELSVYMGNFIAIPHGTDAAKKEVLSSGITIVQVPAGVNFGTEEAPKIAIVLFGIA
                     GVGDEHLEIIQKISIFCADVDNVVKLADAQSEDEVITLLNSVG"
     gene            4354..5490
                     /locus_tag="U1021_001958"
     CDS             4354..5490
                     /locus_tag="U1021_001958"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002963177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HEM4712455.1"
                     /translation="MKQAVHFGAGNIGRGFIGEILFENGFEIAFVDVNETIIDALNQR
                     HAYEIEIAEEGQRHIAVSGVRGINNRLNPEEVVTALATADFVTTAIGSNILPFIAGLV
                     AQGIEARREAGNTQPLDVLACENMIGGSAFLYEEVKKHLSEEGLAYAAEFIGFPNAAV
                     DRIVPAQSHEDPLFVVVEPFNEWVVETQGMKNPNLKLEGVHYEADLEPFIERKLFSVN
                     SGHATSAYTGAHFGATTILEALQNPEVKSKVETVLAEIRSLLIAKWNFDEQALVDYHK
                     VIISRFENPYIVDDIARVARTPIRKLGYDERFIRPIRELRERGLSYDNLLATVSYIFG
                     YKDETDEQSVQLQALLQEKSLPEVVAEVTGLTEPALIEEIVAII"
BASE COUNT         1596 a         1171 c         1298 g         1712 t
ORIGIN      
        1 atagatagat ataaagacga atgtagctgg cttcttgcca atgcattggt ctttttgttt
       61 ttgaagattg ctttgtcaca aaaattgtga caagatttga gttttattgt gtcaagaggt
      121 tttgtataat aaacttacaa aataggagga aaaataatat ggaaaatact tcaattcgtg
      181 ttcgtcttca aaaactgggg acaacgctgt ctaacatggt catgcccaat atcggtgctt
      241 ttatcgcttg gggtgtcttg acctcgctct tcattccaac aggttggttg ccaaatgaaa
      301 cctttgcgac tattgttggc ccgatgataa aatatctctt gccacttttg attggttata
      361 ctggtggtta taatgtttat ggtcaacgtg gtggtgtcat gggtgccatc ttgaccatgg
      421 gggtcatcga gggctcgtct gttccaatgt ttattggagc catggtcgtg ggtcctttcg
      481 gtgcctgggt tatcaagaaa tttgaccaag ctattcagcc aaaaatccgt ccaggtttgg
      541 aaatgttggt taacaacttc tctgctggtt tgattggttt tgtcttgatg ttggtgacct
      601 tcaaagttgt tggtccattc gttgaaagca tgactggcgt ggttggtgat ggtgtacaag
      661 cgattgtcga tatgaaactc ttgccacttg ctaacatcat catcgagcca gctaaggtac
      721 tcttcctcaa caacgccctc aaccacggga tctttacccc gcttggtaca gagcaagtct
      781 tggaagctgg caagtctgtt ctcttcctct tggaagctaa ccctggtcca ggtcttggta
      841 tcttacttgc ctatgccttc tttggaaaag gctctgctaa atcatcttca tggggggcaa
      901 tggtcattca cttcctcggt ggtatccatg aaatctactt cccatacgta ttgatgaagc
      961 cagctctttt ccttgctgct attgctggtg gtgtatctgg tacctttgtt ttccaaacct
     1021 tgggtgcagg tcttgctggt gctgcctctc caggttcaat cattgcggtt accttgatgt
     1081 taccaaaagg tgataataca tttggaaatg cattggccgt atatgctggt gtattcgcag
     1141 gtgctcttgc ttcattcttg gtagcttcta tcatcttgaa agctgacaag tcagaaggag
     1201 aatcattgga agctgctcaa gcggctacaa aagctgcaaa ggctgttgct aaaggtcaag
     1261 cggttgaaac agtcgctgca gaaatctcag caaattctgt taaacaaatt atcttcgcct
     1321 gtgacgcagg tatgggtagc tctgctatgg gtgcttcgct actccgtgat aaagttaaaa
     1381 aagctggatt ggacattcct gttaccaata aggctattgc caacttgcaa gatacagaat
     1441 ataccttgat tgttactcag caagaattgg cggaccgtgc tgctcaacgt acaccacgcg
     1501 ctattcatgt cgcagttgac aacttcttaa cctcaccaaa gtatgatgaa attgttgcga
     1561 aactagtcgg tcaagcccaa gaggtttctc ccaggcaagt aagtttagat gcagaagcag
     1621 aagtagattt gaactatatc gacgaagtgg tctttgccta cggtcaagcc caaggttctg
     1681 ctacaatggg tcaagcaact ctagcagcta tctttaaaaa taaggggatt ggtattccag
     1741 tagccactgt tccttatgat aaattaacag agcacaatgc taaaaatatt ctggttgtta
     1801 ccactattgc ccaacaggca gaggttcaac aagttgcacc gaatgcacaa ctcttggtag
     1861 ttgatagtct agtgactaca ccagagtatg acaaaattgt cgctcgcatg cacaagtaat
     1921 ttttgaaaca atgtagtata ataaagctat gctattaaca aaacgtgaag aacaattgat
     1981 gaaagctttc ctccaagtag ggaagctttc attgaaagaa atggctgata ttttacaggt
     2041 gtcctcacga acggtttatc ggaccttgtc tgatttgaca gattttttga tcgagcatga
     2101 aatcgatttg gttaaggacg ggaagaagta ttatttgtct ggtgatttgt cggctctgga
     2161 agactacaag actttggatt cctattctcc tagtcaacgc ttggaactca tgatctatca
     2221 gctcttgacc agtcaggaag tgataaccaa tgaacaattt caagaacagt tcttagtttc
     2281 caatgtgacg gtcattcaag atattgcagt cattgaaaaa cgcttatcgg attttgacct
     2341 gtgccttgtg cgtcacaaag gttatggaat agagggtaca aatagtcaga aaaggcgact
     2401 tttagctatc cttttagcca atgcgattgc tattcaagac ttctggcagg ataattatga
     2461 caactatcca agtttggaca aggaagtggt agaggaaagt cgtcgtgcct ttgaaagtca
     2521 ccaaactgtt ttgggtgata ttgattctaa actcaagcag ttgctgatta ttctcttgag
     2581 cctagctgac aatcagggag agctagatca tcgagttggc gtttccaagg aagccttgga
     2641 tttttcccag aaggtcttca tgcgtctagc ccaggccagc aaacgctttt acagtatcca
     2701 agaaattatc ttctttgcaa gtatcttaga tgagttgatt atcaagcgac aggaagtgcc
     2761 actcttccga gaaagctttg atagtagctt ctactacaat atctcccagc tgattgactc
     2821 ggtatcacgc tttaccaaaa ttgattttat caaggatcgg cttctttttc ctctgctatt
     2881 taatcacatt cgtttaagtt tggcagtgcc tatgctcttt ccagatcatg ccacgaccaa
     2941 tgttgcttat ctggctaccc agaaaaatcc cttcctacat cgactggtca gcttggttat
     3001 acaggatatc ttcccgacct acttacacaa tgaatatgag tatgaactgg tcaccctgca
     3061 ctttgcatca agcttgcgca gaagtccaga catttatcca attcgtttgc tcttggtgac
     3121 ggacgaaaga ccactgacga caagtgtttt ggtgtcaaaa atcaaaaata tcgcaccatt
     3181 tgtggaatgg attgatgttc agagtacgac aaatctgtca cagttgaatt tagagcacta
     3241 tgattattgc ttgacaacaa agcctgtcgg acaagacgga ctggatttga tttctacctt
     3301 cccaaatacc caggaaattc tggacttgca ggaaactcta caagctattc aggaaaatcg
     3361 tacggtcttg atacgggaag acatcaaaga ggagaatcat tgcgatctgc aggcctattt
     3421 aaaagccagt agccaagtct tgcaatcctt tcgcctaatt catcttggtc agcagactag
     3481 ttttgatgag gcagtagtcg ctactgttgg agagttggat catgtggctg atagagctta
     3541 cttggcagac aaactcttga cccgctttgc agtcagtccg ctggccattc ctcagacaaa
     3601 tctggccctt atacatactc agtctagtca agtaagacat agtcagtttg ttattgttga
     3661 actggaaaac agtgtttccg ccctctccat gaataatcag caggaagcgg tccaacgcat
     3721 tttggtcatg ttgacgcctc taggcgtgga ggcagaagtc cgcgaattga tgacagctat
     3781 cagtcaatcc attatcgaaa acaaacttta tacagagatt taccggacgg gcaatcagga
     3841 aatcatttac cagttgctca attcaatctt taccgaaact atcaagaaat tggagaaata
     3901 acatggaatt acaacagaac cttattaaac taaaccaggc ctttacaacg aaagaagagg
     3961 ctattcgcta ctgtggacat cagttggttc aagctggtca tgtcaatgaa gcctacatcg
     4021 aggcaatgat tgagcggaac caagaattgt ctgtttacat gggcaatttt attgccattc
     4081 ctcatggaac agatgccgcg aaaaaggaag tcctatcatc agggattacc atagttcagg
     4141 tgccagcagg tgtcaacttt gggacagaag aagctccgaa gattgcgatt gtcctctttg
     4201 gaattgcagg tgtgggcgat gagcatttgg aaattattca gaaaatctca attttctgtg
     4261 cggatgttga taacgttgtc aaattagcag atgctcagtc agaagatgaa gtaatcaccc
     4321 tgttgaatag tgtaggataa gggagaagaa gagatgaaac aagcagttca ctttggagca
     4381 ggcaatatcg gacgcggctt tatcggggaa atcctctttg aaaacggctt tgagattgcc
     4441 tttgtcgatg ttaatgaaac cattattgat gcattgaacc agcgtcatgc ttacgagatt
     4501 gaaatagcag aagaaggcca acgccatatt gcagtttcag gggtgcgtgg gattaacaac
     4561 cgtcttaatc ctgaagaagt tgtcacagcc cttgctacag ctgattttgt aacgacagct
     4621 attggatcaa acattctgcc tttcattgca ggtcttgtag ctcaagggat tgaagcccgt
     4681 cgagaagcag gcaataccca accgcttgat gttttggctt gtgagaatat gattggtggc
     4741 tctgcctttc tttacgaaga agtcaaaaaa cacttgtcag aggaaggttt ggcttacgca
     4801 gcagagttta tcggcttccc aaatgcagcg gtggaccgca ttgtcccagc ccaaagtcat
     4861 gaagatccac tctttgtcgt agttgagcct ttcaatgagt gggtggttga aacccagggc
     4921 atgaaaaatc caaacttgaa gctagagggt gttcactatg aagcggactt ggagcctttc
     4981 attgaacgca aactcttctc tgtcaactca ggtcatgcga cttctgccta cacaggtgcg
     5041 cattttgggg cgactactat cctagaagcc ttgcaaaatc cagaggtgaa aagcaaggtt
     5101 gaaactgtgc tggcagaaat ccgtagtctt ctgattgcca aatggaactt tgacgagcaa
     5161 gctttggtgg actaccataa agtcatcatt agccgttttg aaaatcctta tatcgtggat
     5221 gacattgccc gtgtggctcg gacgccaatc cgtaagcttg gttatgacga acgctttatc
     5281 cgcccaatcc gtgaactccg tgaacgtggc ttgtcttatg ataaccttct tgcgactgtc
     5341 agctatatct ttggctacaa ggatgaaaca gatgagcaat ccgttcaact gcaagctctt
     5401 ttgcaggaaa aatccttgcc agaagttgta gcagaagtga caggcttgac tgaaccagcc
     5461 ttgattgaag aaattgtagc tatcatctaa attgcgcctc tagtgtgtgg taggtttaca
     5521 aatgaactaa agcgaacaag ttattctgtt ttgcagaaaa tgaaccttgt tcgcttttca
     5581 ttttgattgc ttttgcaatt ttatacaatt tataggtaaa ttattagaaa attgaaaact
     5641 tttctttgta atacaagata ttttctgcta tactagaacc taatcattct tttaggagaa
     5701 ctttatggat tatgttttgg aagttctgcc cagtctatta aatggtgcgg tagtttccct
     5761 gcaagtattt tttctag
//
LOCUS       DASFQD010000129         5578 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.130, whole genome shotgun sequence.
ACCESSION   DASFQD010000129 DASFQD010000000
VERSION     DASFQD010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5578
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.130"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(11..1147)
                     /gene="dnaN"
                     /locus_tag="U1021_001959"
     CDS             complement(11..1147)
                     /gene="dnaN"
                     /locus_tag="U1021_001959"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000581170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEM4712456.1"
                     /translation="MIQFSINKNIFLQALSITKRAISTKNAIPILSTVKITVTSEGIT
                     LTGSNGQISIEHFISIQDENAGLLISSPGSILLEAGFFINVVSSMPDLVLDFNEIEQK
                     QIVLTSGKSEITLKGKEAEQYPRLQEVPTSKPLVLETKVLKQTINETAFAASTQESRP
                     ILTGVHFVLTENKNLKTVATDSHRMSQRKLVLDTSGDDFNVVIPSRSLREFTAVFTDD
                     IETVEVFFSNNQILFRSEHISFYTRLLEGTYPDTDRLIPTEFKTTAIFDTANLRHSME
                     RARLLSNATQNGTVKLEIANNVVSAHVNSPEVGRVNEELDTVEVSGEDLVISFNPTYL
                     IEALKATTSEQVKISFISSVRPFTLIPNNEGEDFIQLVTPVRTN"
     gene            complement(1301..2674)
                     /gene="dnaA"
                     /locus_tag="U1021_001960"
     CDS             complement(1301..2674)
                     /gene="dnaA"
                     /locus_tag="U1021_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEM4712457.1"
                     /translation="MNQEQLFWQRFIELAKVNFKPSIYDFYVADAKLLGINQQVANIF
                     LNRPFKKDFWEKNFEELMIAASFEIYGEPLAIQYQFTEDEQEIKNTTNARSSVVHQIQ
                     TPESATPQETFKPVHSDIKSQYTFANFVQGDNNHWAKAAALAVSDNLGELYNPLFIFG
                     GPGLGKTHILNAIGNKVLADNPQARIKYVSSETFINEFLEHLRLNDMESFKKTYRNLD
                     LLLIDDIQSLRNKATTQEEFFHTFNALHEKNKQIVLTSDRNPDHLDNLEERLVTRFKW
                     GLTSEITPPDFETRIAILRNKCENLPYNFTNETLSYLAGQFDSNVRDLEGALKDIHLI
                     ATMRQLSEISVEVAAEAIRSRKQTNPQNMVIPIEKIQTEVGTFYGVSLKELKGSKRVQ
                     HIVHARQVAMFLAREMTDNSLPKIGKEFGNRDHTTVMHAYNKIKTLLLDDENLEIEIT
                     SIKNKLR"
     gene            complement(2877..3641)
                     /locus_tag="U1021_001961"
     CDS             complement(2877..3641)
                     /locus_tag="U1021_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEM4712458.1"
                     /translation="MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPI
                     IVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKELTDDDLLYQAIIENLQRSNLNP
                     IEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGKISQGHA
                     RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAVNKKKHTKLKQRDQFLKEQEDSLSK
                     TLGTATKIIKKKNGSGEIRISFNDLDEFERIINNFK"
     gene            complement(3702..4898)
                     /locus_tag="U1021_001962"
     CDS             complement(3702..4898)
                     /locus_tag="U1021_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEM4712459.1"
                     /translation="MERIPYMKKYLKFAILFVIGFFGGLIGALSASFFQPQVQQANSA
                     ITSVSNVQYNNETSTTKAVEKVQNAVVSVINYQKSANNSLGVIFGNIESSDELAVAGE
                     GSGVIYKKDGQYAYIVTNTHVINNAEKIDILLASGEKISGELVGSDTYSDIAVIKISA
                     DKVTAVAEFADSDTIKVGETAIAIGSPLGSVYANTVTQGIISSLSRTVTSQSKDGQTI
                     STNAIQTDTAINPGNSGGPLINTQGQVIGITSSKITSSSANSSGVAVEGLGFAIPAND
                     AVAIINQLEKTGQVSRPALGVHMVNLTTLSTSQLEKAGLSNTELTSGVVIVSTQSGLP
                     ADGKLETFDVITEIDGEAIQNKSDLQSALYKHQIGDTITVTYYRNNQKQTVDIKLTHS
                     TEELSE"
     gene            5073..5552
                     /gene="rlmH"
                     /locus_tag="U1021_001963"
     CDS             5073..5552
                     /gene="rlmH"
                     /locus_tag="U1021_001963"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEM4712460.1"
                     /translation="MKIKLITVGKLKEKYLKEGIAEYSKRLGRFAKLDMIELPDEKTP
                     DKASQAENEQILKKEADRIMSKIGERDFVIALAIEGKQFPSEEFSQKISDIAVNGYSD
                     ITFIIGGSLGLDSCIKKRANLLMSFGQLTLPHQLMKLVLIEQIYRAFMIQQGSPYHK"
BASE COUNT         1684 a          957 c         1016 g         1921 t
ORIGIN      
        1 ttaatattat ttagttggta cgcactggtg taaccaattg aataaaatct tccccttcat
       61 tatttggaat caatgtaaat ggacggacag aagagataaa gctaattttc acttgttcac
      121 tagttgtggc tttcaatgct tctatcaagt aagttgggtt aaagctgatt actaagtctt
      181 cacctgatac ttctacagta tctaattcct cattcacacg tccaacttct ggagaattta
      241 catgagccga tacaacatta ttagcaattt ctagttttac tgtaccattt tgggttgcat
      301 ttgaaagaag acgagcacgc tccatcgagt gacgaagatt tgcagtatca aaaattgcag
      361 ttgttttaaa ctcagttgga attaagcggt ctgtatcagg gtaggtacct tctaataagc
      421 gtgtatagaa gctaatatgc tcgcttctaa aaaggatttg attatttgaa aagaagactt
      481 ccactgtttc aatatcatct gtaaaaactg cagtaaattc acggagagaa cgacttggaa
      541 tgacaacatt aaaatcatca ccagaggtat caaggaccaa tttccgttgg ctcatacggt
      601 gtgaatctgt tgcaacagtt tttagatttt tattttctgt taaaacaaaa tgaacacccg
      661 taagaatagg acgactttct tgtgtagaag ctgcaaatgc tgtttcatta attgtttgtt
      721 ttaatacttt ggtttctaac accaatggtt ttgaagttgg aacttcctgt aaacgaggat
      781 actgttctgc ttcttttccc tttaatgtga tttcagactt accacttgtc aaaacgattt
      841 gcttttgttc aatttcattg aagtcaagga ccaaatccgg catgctggat acgacattaa
      901 taaagaaacc agcttctaag agaatggagc ctggagaact gatcaaaagt cctgcatttt
      961 catcttgaat agaaataaaa tgttcaatcg agatttgtcc atttgaacca gttaaagtga
     1021 ttccttcact agttactgta atttttactg ttgaaagaat tggaatagca ttttttgtac
     1081 tgattgcccg tttagtaata ctaagtgctt gtagaaatat atttttatta atagaaaatt
     1141 gaatcatgga ttctccttta tttattatct ataaggttaa tagtaatagt agtctttgtg
     1201 tattctgtgg aaaagtgatg aaagaccaat aaaactgcgg aaattaactt gttcacaact
     1261 tgtggaaaaa acagagtttt tttaaaaagt tatacacagg ttaacgaagt ttatttttta
     1321 tactggtaat ctctatttct aaattctcat catccaagag gagagttttt attttattgt
     1381 atgcatgcat aacggttgta tggtctcgat taccaaattc tttcccaatt tttggaaggg
     1441 aattgtctgt catttcacgt gctaaaaaca tagcaacttg tcgcgcgtga acgatatgtt
     1501 gaacacgctt agaacctttt aattctttca agctgacacc gtagaaagtt cccacttcgg
     1561 tttggatttt ctcaatagga ataaccatgt tttgtggatt tgtttgtttt cttgatcgaa
     1621 tagcttcagc agcaacctcg acacttatct cagacagttg acgcatagtg gctatcaaat
     1681 ggatatcttt taaggcacct tcaaggtcac gtacgttcga atcaaattgt ccagctagat
     1741 aggatagcgt ctcatttgta aagttgtaag gcaggttctc gcacttgtta cgtaaaattg
     1801 cgatacgtgt ttcaaaatca ggtggagtga tttcactggt taacccccat ttgaaacgtg
     1861 ttactagtct ttcttccaaa ttgtctaagt gatcgggatt acggtcgctt gtgagtacaa
     1921 tctgcttatt tttttcatga agcgcattaa aagtatggaa aaattcttcc tgtgttgttg
     1981 ctttattacg gagagactga atgtcatcaa ttagaagtaa gtccagattg cgataggttt
     2041 ttttgaaact ttccatatca ttgagacgga ggtgttctaa aaattcattg atgaatgttt
     2101 ccgatgagac atattttatt cttgcctggg gattatcggc tagaacctta tttccaatcg
     2161 catttaaaat atgagttttt ccaagaccag gaccaccaaa aatgaataat ggattgtaga
     2221 gctcacctag gttatcagat acagctaaag ctgcagcctt tgcccagtga ttattgtctc
     2281 cttgtacaaa gttagcaaag gtgtactggg attttatatc agaatgaacc ggtttaaaag
     2341 tttcttgagg agtagccgac tcaggtgtct gtatctggtg aaccactgaa cttcttgcgt
     2401 ttgtagtgtt cttaatctcc tgttcatcct ctgtaaattg atattggatg gcaagaggct
     2461 ctccgtagat ttcaaaacta gcggcaatca ttaactcttc gaagtttttt tcccagaaat
     2521 cttttttaaa tggacgattt aagaaaatat tggcaacttg ctggttgatt ccgagtaatt
     2581 ttgcatcagc gacataaaaa tcataaatag atggcttaaa atttaccttt gccaattcaa
     2641 taaatcgttg ccaaaaaagt tgttcttggt tcatattttc cccctttcac attatattcg
     2701 ttagaatagt gtaccataaa aaacaaaagt tttccacaga taattttaaa aatccacact
     2761 gttaagaaaa gttttccaca agatgtgaat aaaagtcaga acctttgctg gtcctgactt
     2821 tttgtaatga ttttagtgtg gaaaagagtg tttataaaaa taaattgtaa acaagtctat
     2881 ttaaaattgt tgataattct ttcgaattca tcgaggtcat taaagctaat ccgaatttct
     2941 ccgctcccgt ttttcttctt gataattttt gtagctgttc caagagtttt actgagtgaa
     3001 tcttcctgtt cttttaaaaa ttggtcgcgt tgtttaagct tagtgtgttt tttcttattt
     3061 acagctatta atttttcaag cgtacgcaca cttaaatcct ttgataaaat gagttgaacc
     3121 cattcggctt gcttttcttc tgaaaatgac accaattgtc gcgcgtgccc ttgtgaaatt
     3181 tttccttctt ctacagcttg tttagtctga gatgatagat ttagtaggcg caataaatta
     3241 ctgatatatg gtcttgattt tcccatgatt tgagcaactt catcatgtgt taaccctcta
     3301 ctaatcaatt tttgataaga ggctgcttct tctatcggat ttaagttaga acgctgtaga
     3361 ttctctatga tagcctgata gagtaaatca tcatcagtta gttcctttac cactgctggt
     3421 attgtagtca gtccagctaa ttgactggct cgcaaccttc tttctccagc taataattcg
     3481 tatccgataa tagaagattt tcttacaata atcggttgaa ttaagccatt ttccttaatg
     3541 gattgagcga gctcaagtag ctctttttca tcaaaatgaa ttcttggctg atagggattg
     3601 ggatggattt ctgaaatatt tagtgtacgt aattcttcca tatatcctta ttctagcaaa
     3661 aaaaacgaga ctttacaatt gtgtaaagtc tcatttgtca attattcgct aagttcttct
     3721 gtagaatgtg tcaacttaat gtcaacagtt tgtttctgat tattgcggta ataagttaca
     3781 gtgattgtgt ctccaatttg atgtttgtag agagcacttt ggagatcact cttattttga
     3841 atagcttctc cgtcaatctc agtaatgaca tcaaaagttt ctaattttcc atctgcaggt
     3901 agtccacttt gtgtagagac aattacaaca ccagatgtta attccgtatt tgataatcca
     3961 gctttttcta attgactagt tgacaaggtc gtcaagttaa ccatatgaac tccaagagca
     4021 ggtcggctaa cttgtccagt tttttcaagc tgattgataa tagctacggc atcatttgca
     4081 ggaatagcaa atcccaaccc ttctacagcc acgcctgagc tatttgcaga acttgaggta
     4141 attttgctag aggtaatgcc tatcacttgt ccttgggtat tgattaacgg tccgccagag
     4201 tttccagggt tgatagctgt atcagtttga atagcgttag ttgagattgt ttgtccatct
     4261 tttgattgtg aagtaactgt ccgacttaag ctagaaataa taccctgggt aactgtattg
     4321 gcgtagacgc tacctagagg actaccaatt gcgatagcag tttctccaac tttaattgta
     4381 tcggaatcag caaattcagc aacagcagtg actttatctg ctgatatttt tataacagct
     4441 atatcagaat aggtatcgga accaacaagt tcaccgctaa ttttttctcc agatgctaaa
     4501 aggatatcaa tcttttctgc gttattaata acatgcgtat ttgtcacaat ataggcatat
     4561 tgaccatctt ttttatagat aaccccagac ccctctccag caacagctag ttcgtcagat
     4621 gattcaatat ttccaaagat aacaccaaga ctattgttgg ctgatttttg gtaattaata
     4681 acagacacaa cagcattttg tactttctct acagcttttg tggtggaagt ttcattatta
     4741 tattgaacat tgctgacact agtgatagca gaatttgctt gttgcacctg tggttggaag
     4801 aaagaggctg ataaggcccc gataagaccc ccaaaaaatc caattacaaa taaaatcgca
     4861 aatttcaaat attttttcat ataaggaatc ctttccattt ctttaatttt ccttaagagt
     4921 actatttctt tcttaattat agcttaaagt tttcaaaaat caatccacaa cctgtggata
     4981 actctgtgaa ttatgtgaaa aaactgtagc catatcctga ttttctaaaa atattttctg
     5041 tcgtatgctt gtggatatgt tacaattatt ttatgaaaat aaaattgatt accgttggaa
     5101 aattgaaaga aaagtacctc aaagaaggta ttgcagaata tagtaaacga ttgggacgat
     5161 ttgctaagtt ggatatgatt gagcttcctg atgaaaaaac accagataaa gccagtcagg
     5221 cagagaatga acaaatatta aaaaaagaag ccgatagaat tatgtctaaa attggagagc
     5281 gagattttgt cattgcctta gcgatagaag gcaaacaatt tccatcggaa gaatttagtc
     5341 aaaagatatc tgacattgca gtaaatgggt attcagatat aacttttatc atcggtggta
     5401 gtttgggtct cgattcttgt attaaaaaaa gagctaattt gttgatgagt tttggacagt
     5461 tgacacttcc ccatcaacta atgaaattag ttctcatcga gcaaatttat cgtgcattta
     5521 tgattcagca gggaagccca tatcataagt agtttcacgt gaaacaagga gtgaaaat
//
LOCUS       DASFQD010000130         5542 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.131, whole genome shotgun sequence.
ACCESSION   DASFQD010000130 DASFQD010000000
VERSION     DASFQD010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5542
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.131"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(610..1554)
                     /locus_tag="U1021_001964"
     CDS             complement(610..1554)
                     /locus_tag="U1021_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011117663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="HEM4712461.1"
                     /translation="MEHTQNQAQILIDKNSKGKKRDWRGRKIASLKLSEVFQNLDYKP
                     SMVERVSSCAEALRFHKQPDGRLKLYQAYFCKNKLCQMCNWRRSMKYSYQTACIVNEA
                     MKQFPKGRFLFLTLTVKNVEGENLSSTLSSLTQAFNRLFKYKKVQANLLGYLRSIEVT
                     YNEDRKDYHPHIHVLLFVRPNYFSGRGNNYISQEEWAELWAKSLKVNYVPMVDIRAVK
                     DQGKGLHGAILETAKYPMKPFELSIENAQVVDDLYNGLYRKRQLGYGGLFKEIKKKLA
                     LDDAENGDLVHTTDDSEVSDGTKIVAIWNATKQNYFIK"
     gene            complement(1817..2524)
                     /locus_tag="U1021_001965"
     CDS             complement(1817..2524)
                     /locus_tag="U1021_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000947694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712462.1"
                     /translation="MKIKKRSGEQRFETLSNKSFWLKFLIFFGYLFHDIFSRIKNGQD
                     FREYGLTLYCGRQGAGKTMAMTEYLERMRKKYPKAIICTNFGYVHQTLPMTDWKQIFT
                     VRNGLDGVIFAIDEIQNEYNSASWKNFPEGLLAEITQQRKQRIKIVGTSQVFTRVVKQ
                     LREQTFEVVDCRTLAGRWTFTKAFDAEEYNAVCDRPEVKMKLRRLWRKNFVQTKRLRE
                     LYDSYAKIEQLTKELES"
     gene            complement(2592..2843)
                     /locus_tag="U1021_001966"
     CDS             complement(2592..2843)
                     /locus_tag="U1021_001966"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712463.1"
                     /translation="MLQGLIDMCVGLLEWLIGLIPRITFFEGFASAVSSIYGVLYEAS
                     VIIPFSDLFICIGVISGFYVTLFVIKCINWIVHRIPILN"
     gene            complement(2846..4414)
                     /locus_tag="U1021_001967"
     CDS             complement(2846..4414)
                     /locus_tag="U1021_001967"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712464.1"
                     /translation="MKKILKKCQIWICIFLLIFGAVHRPKTVKADAGVLTGGGMVIGA
                     LNPAVIPVILIGLAAFLLLGYTISNWDEIEAFGQSVANELVAMGHSVGDFISGSSVKV
                     NDVFKTAVKNVANKTGNTLDRYNQSVHYTGGLQVHTGTFANIRMLVGSDTAQLQVGTK
                     PAGSGLLGGASKKFVEGRDYLVPAITVIVDVAPTNLNLKLQRNGSVYTDTEIIRNSSG
                     QIVQLRRRFSNSGKAANTFSIYIEGPYGKSYTVTGVSIPEIGLGERPNDKVSLEGAKS
                     TAITSQKVDEYVQTAFPDTSTTVTFDQNADVTGATLATIPTISNHNLTDTQVQDLTKI
                     KSGVDTAVNTGADTAIDSMTGTASAGVGAGWDWLSKLWEWLKKLLDAILGLPAAILAG
                     LQAFWDSLIKWLTDIWTAIKAIPGAISKAWTDALTWAFGVDQTWLDARIKNLRLAFNS
                     KFPNIQAFNYRFGDKSAFDDIRITLPGFGTHAVVSGSAMTAFAVKAKPFISGIFYLLT
                     ALFFMRKFYKVSED"
     gene            complement(4476..4616)
                     /locus_tag="U1021_001968"
     CDS             complement(4476..4616)
                     /locus_tag="U1021_001968"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712465.1"
                     /translation="MITADLIQPVVQAVTSNFTAIVPAGLSILALSLGVSAVPKVIKK
                     FF"
     gene            complement(4679..5167)
                     /locus_tag="U1021_001969"
     CDS             complement(4679..5167)
                     /locus_tag="U1021_001969"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712466.1"
                     /translation="MSSEDFVGYNKALLEKMDRQIKQNENIESQLKKINERLEKAEIA
                     RIDTEKQKQAEEQARIERGEQTTEEKSLTALENLTKVIQEQPPSSDDAILKELEKLNS
                     SYSELKTSETTKQVQKLVTTISKDYEGMTLQTSVINSYGLLFIPAILIILFLHNSLKE
                     FI"
     gene            complement(5181..5480)
                     /locus_tag="U1021_001970"
     CDS             complement(5181..5480)
                     /locus_tag="U1021_001970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712467.1"
                     /translation="MKNDVLILGARPYDFTDENTGKHISGVTLWVLPFANEDPANQIG
                     LLPVKYSLTQEQFAVIAGASFPAVAEMHMQLNIATKRIKFDHFENIQPVDLEKAA"
BASE COUNT         1640 a         1186 c          925 g         1791 t
ORIGIN      
        1 aaaaaaaaaa gcaatttaac aaaaaatgtt ccatttcttg ttaaattgca ctgcttaagg
       61 ttaatctatg cattttatat atttatttca cggtttcatt gacgacaagg aacctgggac
      121 taaacttaga aaatcgtctg ttggtcggtc taatgcccca ccaacacgat ttctagttta
      181 atctgtccca gcttatcgtc aacgaacttt cgcgacataa aacgttcact gacccctaaa
      241 aagacgaata ttttttgtcc tggagagtgt cacgtcggca ttaaaaaccg aatattttta
      301 cacgtgtaaa aatatgataa aatagtcttg ctatctgccc caatagtgaa taacttgaag
      361 ggaggtatta tctaatggat atcttgctag agctcttgct caacatcgtg gctaacgttg
      421 tcgcttactt cgtttgcaag tggttagatg atgagcttaa tcgatagcta gccctacccg
      481 ttaatctctt ttgagaacgt aaaaaaagcc ctcaggaacg gcaattcctg ggggctttgg
      541 tatattctaa cgaatatctt tgcttgctta tagtatagca gatttcaaaa aatatgcaat
      601 cattacaatt tacttgatga aatagttttg tttcgttgcg ttccagattg caacgatttt
      661 agtaccgtct gaaacttcac tatcgtctgt agtatgtact aaatcaccat tttcagcatc
      721 atctagggct agtttcttct tgatttcctt aaatagcccg ccataaccta actgccgttt
      781 tcgatacagc ccgttataca aatcatcaac cacctgggca ttctcaatac ttagttcaaa
      841 tggtttcatt ggatattttg ccgtttcaag aatggcacca tgaagccctt tgccctggtc
      901 cttaactgct cgtatatcga ccattggcac ataattaacc ttaagagatt tcgcccataa
      961 ttctgcccat tcttcctggc tgatatagtt gtttcctcga ccactgaagt aattaggtct
     1021 gacaaataga agtacatgga tatgcggatg gtagtctttt ctgtcttcgt tgtaagtaac
     1081 ctcgatagaa cgaagatagc ccaataaatt tgcttgcact tttttatatt taaacaaacg
     1141 attaaaagct tgtgtcaaag aggaaagggt tgatgataag ttttctccct caacattttt
     1201 aaccgtcaaa gtcagaaata gaaatcgacc tttcggaaat tgcttcatag cttcattgac
     1261 tatgcaggct gtttgataag aatatttcat tgaccgcctc cagttgcaca tttgacagag
     1321 cttattttta cagaaataag cctgatatag tttcaatctt ccgtctggtt gcttatgaaa
     1381 tcgtaaagcc tctgcacatg atgaaacacg ctcgaccatg ctcggcttat aatctaaatt
     1441 ctgaaatacc tcagacaatt tcagactagc aatcttgcga cctcgccagt ctcttttttt
     1501 gcccttggaa ttcttatcta tgagtatttg agcttgattt tgagtatgct ccatgttata
     1561 atttacctgt aattacaaag aatataaaaa aagtccttgc attttcaacc tttcttttaa
     1621 atttgaatta gacacttaaa ttataacaga aagcttgagc agaaacaagg ctttttttgc
     1681 gcctaaaaac tcagtcgtac caagggttta ggcctcgtca aagctatgca ttttaaaatc
     1741 ttgttatttc tatatgtatc aagataagaa gaaagctcct gcggagcttt ctcaaaaggg
     1801 gcttgcagcc ccttttttag ctctctaact cttttgttag ctgctcaatt ttagcgtaac
     1861 tgtcatacag ttctcgaagt cgttttgtct gcacaaaatt cttccgccac aatctccgaa
     1921 gtttcatttt cacttctggg cggtcgcaaa ctgcattata ctcttcggca tcaaatgcct
     1981 tggtaaaggt ccaacgacct gcaagagttc ggcagtctac aacctcaaaa gtctgttctc
     2041 taagctgttt cacaacccta gtaaatacct gggatgtacc aacaatttta atgcgttgtt
     2101 ttctctgttg ggtaatctct gccaacaagc cctctgggaa gttcttccag ctggccgagt
     2161 tgtattcgtt ttggatttca tcaatggcaa aaataacacc gtccagaccg ttgcgaactg
     2221 taaaaatctg tttccagtcg gtcatgggta aagtttgatg aacataacca aaattcgtac
     2281 agataatggc tttaggatat ttcttccgca ttcgttccag gtactcggtc attgccattg
     2341 ttttccctgc tccctgccta ccacagtaca atgttagacc gtactctctg aaatcttggc
     2401 cattcttaat tcttgaaaaa atgtcgtgaa ataggtaacc gaaaaatatc aagaatttca
     2461 accaaaatga tttatttgat agtgtttcaa agcgttgttc accgctcctt tttttaattt
     2521 tcatatctcc tccagaaaag cgctgcagct tgcccgcaag catgcagacg cttttttctt
     2581 tgtcgttttc tttaattcaa aatcggtatg cggtgaacaa tccagttgat acacttaatt
     2641 acaaataaag tcacataaaa tccagaaatg acaccgatac atataaataa atctgaaaat
     2701 ggaataatta cggatgcctc atataacact ccgtaaatgc tagaaactgc cgaagcaaat
     2761 ccctcaaaaa atgttattcg tggaattaaa ccaataagcc attctaacaa gcctacacac
     2821 atatctataa gcccctgtaa catctttaat cctccgaaac cttatagaat ttacgcataa
     2881 aaaacaaagc cgtcagcaag tagaatatgc cactaatgaa aggcttagcc ttgacggcaa
     2941 aggccgtcat agcacttcca gacacaactg catgagtgcc gaaacctggt agagtaattc
     3001 taatatcatc aaatgctgac ttatcgccaa aacgataatt aaaggcttga atatttggaa
     3061 atttgctatt gaatgctaat cttagatttt taatccttgc atctaaccag gtctggtcaa
     3121 ctccgaaagc ccaagtcaaa gcatcagtcc aagccttaga aattgctcct ggaatagctt
     3181 taattgctgt ccagatgtct gtcagccatt taatcaaact atcccaaaat gcttgcaaac
     3241 ctgctaggat agccgcagga agccctaaaa tcgcatctaa gagcttttta agccactccc
     3301 atagtttcga cagccaatcc caaccagctc ccacaccggc cgaagctgtc ccagtcatgc
     3361 tatctattgc cgtatctgct ccagtattta ccgctgtatc tactccagat ttaattttag
     3421 taaggtcttg tacttgcgtg tctgttaaat tatgatttga aatggtcgga atagttgcca
     3481 atgttgcacc agtcacatct gcattctgat caaatgtgac tgttgtagaa gtatctggaa
     3541 aagccgtttg aacgtactca tcaactttct gagaagtaat tgctgttgat ttggcacctt
     3601 caagcgaaac cttatcatta ggccgctctc ccaaaccaat ttctggtatc gatacacctg
     3661 tgaccgtgta gctcttaccg tatggaccct ctatatatat actgaaggta ttagcagctt
     3721 ttccactatt tgaaaatctt ctccttaact gcacaatttg accagatgaa tttcgaataa
     3781 tttctgtatc tgtataaaca cttccatttc gttgtaattt taaatttaga ttggttggag
     3841 ctacatcaac gattacagta atagcaggta ctagataatc tctaccctca acaaatttct
     3901 tgctagcccc tcctagcaaa cctgaaccag ctggtttagt tcctacttgt aattgagctg
     3961 tatcacttcc aaccaacata cgaatattag caaacgttcc tgtatgaacc tgtaaaccac
     4021 ctgtataatg aacactttga ttgtatctat ctaacgtatt gcctgtttta tttgctacgt
     4081 tcttaaccgc tgttttaaag acatcattaa ccttaacgga tgaacctgaa ataaaatcgc
     4141 caacactatg ccccattgca actaactcat tagcaacaga ttgcccaaat gcttctatct
     4201 catcccaatt actgattgtg taaccaagca acaagaaagc tgccaaacca atcagaataa
     4261 caggaattac tgctggattt aatgcaccaa tcaccatacc gccaccagtc aaaacacctg
     4321 catcagcttt aactgtttta ggtctatgga ctgcaccaaa tatcagcaag aaaatacata
     4381 tccaaatctg acattttttc aatatttttt tcatttgtat cctcctaaca aaaaaagggt
     4441 acaagctgaa acaagtaccc tttttccgaa aattattaaa agaatttttt gataactttc
     4501 ggaactgctg aaacaccgag cgacaacgcc aagatagaca aaccagctgg aacgatagct
     4561 gtaaagttgc ttgtaactgc ttgtacgact ggttggataa gatctgctgt aatcatttga
     4621 ttacctccta taaaaaattt ttttaatttt aggtgtttaa cgtcccctcg gacaaggatt
     4681 aaataaattc tttcagcgaa ttatggagaa ataagataat gaggatagca ggtataaaaa
     4741 gtaatccgta actattgatt acagaagtct gtaatgtcat tccttcgtaa tctttagaaa
     4801 ttgtagtcac tagtttttga acttgtttcg ttgtttctga ggttttcaat tcggaatagc
     4861 tagaatttaa tttttcaagt tctttcagaa tggcatcatc tgaggaaggt ggttgctcct
     4921 ggataacttt tgtaagattt tccaaggctg tcaggctttt ctcttcagta gtctgctccc
     4981 ctcgctcaat tcttgcctgt tcttcagctt gtttttgctt ttcggtatca atacgagcaa
     5041 tttcagcttt ttctagtcgt tcatttatct ttttaagttg gctctcaatg ttttcattct
     5101 gttttatttg tcggtccatt ttttccagga gagccttgtt atagccgaca aaatcttcac
     5161 tagacacccc attcataaaa ttacgcagcc ttttctaagt caactggctg aatgttttca
     5221 aagtgatcaa acttaatacg ttttgtagca atatttaact gcatgtgcat ttctgcaaca
     5281 gctggaaaac tcgctccggc aatcactgca aattgttcct gtgtcaaact atatttaact
     5341 ggtagtaatc caatttgatt tgccgggtct tcatttgcaa aaggtagtac ccataaagta
     5401 accccagaaa tatgcttacc tgtattttca tcggtaaaat catagggacg agctccaaga
     5461 attaaaacat catttttcat tttttacctc cttgtgtttt ttcctggtca attaatctat
     5521 tcgcaagaaa attaaatttg ct
//
LOCUS       DASFQD010000131         5537 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.132, whole genome shotgun sequence.
ACCESSION   DASFQD010000131 DASFQD010000000
VERSION     DASFQD010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5537
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.132"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            8..646
                     /locus_tag="U1021_001971"
     CDS             8..646
                     /locus_tag="U1021_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3990 domain-containing protein"
                     /protein_id="HEM4712468.1"
                     /translation="MDLTSKQIKNLSHSKWYHATLKRHLPSLLKGIKVDFNLGHELDF
                     GAGFYITSDFQQAQKYINRLVEFLNANNASSKFLGNVDEEGIILEFELTDFPSIFTTS
                     KYKCHYFNSHKASNDVIDFAEFVFQNRLRSTELIHQFDFIYGVQTDDNPTGLLQKYKA
                     GMVSKADVLEEFRKPFSFKQLSIHNQDFCDIMKVNKIYLSEDGKELDQWQKL"
     gene            631..855
                     /locus_tag="U1021_001972"
     CDS             631..855
                     /locus_tag="U1021_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000301903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712469.1"
                     /translation="MAKTVISPVDLYSNELAQALLEASKYRLEASVAHQIARQYASQV
                     DFEDPILMHVGVNSIASTLIDKIKPEYFQT"
     gene            934..2136
                     /gene="dcm"
                     /locus_tag="U1021_001973"
     CDS             934..2136
                     /gene="dcm"
                     /locus_tag="U1021_001973"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007520231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEM4712470.1"
                     /translation="MYFLDLFAGIGGFRLGLEQAGHICVGFCEIDRFARNSYQAIFDT
                     GGEVEFHDIREISNKSFRKLRGKIDCICGGFPCQAFSLAGRRLGFEDTRGTLFFEIAR
                     ATQQIQPRFLLLENVKGLLNHDQGRTFRTILTTLNELGYDVEWQVLDSKYFGVPQHRE
                     RVYIIGHSRGRSRQFIFPIGRKSKQTNLSSPTCLGNINPSGSGLNGNVYSSSGISPTL
                     TTNKGEGVKIAYPILTPDRLVKRQRGQRMKDPTEPMFTLTAQDRHGVVLEKRMPRKRG
                     LYIRSNTNKGFEIAIEGDSLNFAYPSSNFRRGRVGKQVAQTLVTGNSLGVVTNQLRIR
                     KLTPRECFRLQGFPDWAFNRASSVSSNSQLYKQAGNAVTVPVVYEIGKRLAAIEKEGK
                     AVENHESC"
     gene            2114..3073
                     /gene="dcm"
                     /locus_tag="U1021_001974"
     CDS             2114..3073
                     /gene="dcm"
                     /locus_tag="U1021_001974"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001045233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEM4712471.1"
                     /translation="MKTMRVVELFGGIGAFRKALLNQKVPHELIDFVEIDRNCVKSYN
                     VLYNENFIPQSVKGYSLPNVQIDLLMHGSPCQDFSRSGLKRGGRKGSYTRSSLLFETI
                     MILKNAVKKPKWVIWENVVGVLDKKMKPTFETYLSELEYLGYSSCYWVLDSYDFGIPQ
                     KRKRVFVVSFLGKVNPFDFSKLKRMKSPSIQVFLEEDVADKYLVTQPSILKYIEKASQ
                     SVFTERVHIIQDYCYTISTKQTRVPNAGFIKLTNGKYRYLTERECFRLMGFTDLDFDL
                     LRTVYPEKTNKKSSILYQQAGNSIVVPVLEAIIKQIYQKELIK"
     gene            3070..3522
                     /locus_tag="U1021_001975"
     CDS             3070..3522
                     /locus_tag="U1021_001975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712472.1"
                     /translation="MKLLHKKSIYESDYEESLRHDKEIDDIISKLLSLPDYHSEFQLR
                     FEDDYHKEMNVPLDYESFLHNIFDFIAEQDIKNGVDVLLTDEGNLYFMAYGQSYTIRS
                     TGVSDVVRTSVTVISKDEDDNKVDFGQHFACPVPEKEQTNKPKSEHVL"
     gene            4313..4747
                     /locus_tag="U1021_001976"
     CDS             4313..4747
                     /locus_tag="U1021_001976"
                     /inference="COORDINATES: protein motif:HMM:NF025561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TnpV protein"
                     /protein_id="HEM4712473.1"
                     /translation="MNQALLIEKMNTTLTVNDFSHCQSTEEIVEVIYRLTLQTLRTNQ
                     QIRDEIGKALYAKERLEFLSKEENKTELLLELYQTGQLIPHLIAVEKESQSMAEQIES
                     HLIQEWKLTEDLKTKDMLSWISQMNNLRQSVKEQVRENLIYI"
     gene            4951..>5537
                     /locus_tag="U1021_001977"
     CDS             4951..>5537
                     /locus_tag="U1021_001977"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712474.1"
                     /translation="MTRKADGYNETFSWRKVAGEIDRLLENETYLSDDESKLYQYNEQ
                     IFSNFQESPLFEFDKLDNGQVNVFLEDELVARIDTVGQVSYVVELEDRFKFEIDEYVQ
                     NLETSLLIEKISQHEQLDLFDDSAFDDSSVDDTISVAEGINSADHITPSQSTRKPDLL
                     DNYILDNLPHSLSPSERLDNNLEAIRIIKKLDLEG"
BASE COUNT         1838 a          890 c         1156 g         1653 t
ORIGIN      
        1 tattgaaatg gatttaacaa gtaagcaaat taaaaatttg tcacatagta aatggtatca
       61 tgctacttta aaaagacatc ttccgtcttt gttgaaaggg ataaaggtag atttcaactt
      121 aggacatgaa ctcgattttg gtgctggatt ttatatcact tcggattttc aacaagctca
      181 aaaatatatc aatcgtttgg tagaatttct aaatgccaat aatgctagtt cgaaattttt
      241 ggggaatgtg gatgaggaag ggattatttt agagtttgaa ctgacagatt ttccttccat
      301 ctttacaact tctaaataca agtgtcacta tttcaatagt cataaggctt ctaatgatgt
      361 aatagatttt gctgagttcg tgtttcagaa tcggcttcgc tcaacggagc ttattcatca
      421 atttgatttt atctatggag ttcagacaga cgataatccg actggtttac ttcaaaaata
      481 taaggctgga atggtttcaa aagcagatgt tttagaagaa tttcgtaagc cattctcatt
      541 taagcagtta tccattcaca atcaagactt ttgtgatata atgaaggtaa ataagatata
      601 tttatctgaa gatggaaagg agttagacca atggcaaaaa ctgtgattag ccctgttgat
      661 ttgtatagta atgaattagc acaggctttg ttagaagcat ctaaatacag acttgaggct
      721 agtgttgcac atcaaattgc aagacagtat gcaagtcagg tagattttga agatccaatc
      781 ttgatgcatg ttggggttaa ctccatcgca agcaccttga ttgataaaat aaaacctgag
      841 tattttcaga cttaaaaaaa ctttttgata cttaatcatt agagcgatta gagaaatcta
      901 gtcgcttttt tctattgtca gaaaggagga aaaatgtatt ttttggattt atttgcaggg
      961 ataggaggtt ttcgattagg acttgaacaa gctggtcaca tttgtgtagg tttttgtgaa
     1021 atagaccgct ttgctcgaaa ttcctaccaa gctatttttg atacgggagg agaagttgaa
     1081 tttcatgata tacgagaaat atccaataag tcattccgaa agctccgagg aaaaattgat
     1141 tgcatctgtg gtggattccc ttgtcaagca ttttcgctcg ctggacgaag attgggattt
     1201 gaagatacta gaggaactct gttcttcgag attgctagag cgacccaaca aatccaacca
     1261 cggtttttac tgcttgaaaa cgttaagggc ttactcaatc atgaccaagg gaggacgttc
     1321 cgaactatac tcaccacgct taatgaactg gggtatgatg ttgaatggca agtacttgac
     1381 agcaaatatt ttggtgtccc tcaacacagg gaaagagtct atattattgg acattctaga
     1441 ggaagaagtc gacagttcat ttttcctatc ggacgaaaaa gtaaacagac taatttatca
     1501 agtccaactt gtctaggaaa tataaatcct tcaggaagtg ggttaaatgg aaatgtatat
     1561 tcatcgagcg gaatttcgcc cactttgact actaataaag gtgagggggt aaaaattgct
     1621 tatcctatcc taacacctga tagattggtt aaaaggcaaa ggggacagcg gatgaaagac
     1681 ccaacagaac ccatgtttac gttaacggca caagaccgac acggagttgt cttggaaaaa
     1741 cgcatgccga gaaaacgagg actttacata cgttcaaata caaataaggg attcgagatt
     1801 gctattgaag gtgactcgct taattttgct tatccatcat caaattttcg tagaggacga
     1861 gttggaaaac aggttgctca aaccttagta actggtaact ctcttggagt tgtaacgaat
     1921 caattgcgga ttcgtaaatt aactccaaga gagtgttttc gtttacaggg ttttcctgac
     1981 tgggcattta atcgagccag tagtgtttct tccaattcgc aattgtataa gcaagcaggt
     2041 aacgcagtaa cggtacctgt tgtttatgaa attggcaagc gattagccgc tatagaaaag
     2101 gagggaaaag cagttgaaaa ccatgagagt tgttgaatta tttggaggaa ttggtgcttt
     2161 tcggaaagca ctactaaatc agaaggtccc tcatgaattg atagactttg ttgaaataga
     2221 taggaattgt gtaaaaagtt ataacgtcct ctataacgag aattttattc ctcaatccgt
     2281 taaagggtat tccttaccaa atgttcagat tgacctgtta atgcatggta gtccttgtca
     2341 ggatttttca cgttctggac taaaaagagg gggaaggaaa ggttcgtata cgagaagttc
     2401 actattgttt gagacaatta tgattttaaa aaatgctgtc aaaaaaccta aatgggttat
     2461 ttgggagaat gtcgtaggtg tactagataa gaaaatgaaa ccaacatttg agacctatct
     2521 atctgaactg gaatatttag gctattcatc ttgctattgg gttttggaca gctatgattt
     2581 tggaatacct caaaaacgga aacgagtctt tgtagttagt tttctaggca aagtcaaccc
     2641 attcgatttt tcaaaattaa aacggatgaa atctccgtcg attcaggtat ttttggagga
     2701 agatgtagcc gataagtatc tggttaccca accttcaatt ctaaaatata ttgaaaaagc
     2761 ttctcagtca gtttttactg aacgagttca tatcattcaa gattattgct ataccatttc
     2821 tacgaagcaa acacgagtgc caaatgctgg gtttattaaa cttactaatg ggaaatatcg
     2881 ctatctaaca gaaagagaat gtttccgctt gatggggttt actgatttag actttgattt
     2941 attacggact gtatatccag aaaaaaccaa caagaaatcc agtatccttt atcaacaagc
     3001 cggaaattcc atagtagtac cagttctaga ggcaatcata aaacaaattt atcaaaagga
     3061 gttaatcaaa tgaaactatt acacaagaaa tcaatttacg agagcgatta cgaagaatct
     3121 ttgcgacatg acaaggagat agacgatatt atatcaaaac ttttgtcgct accagattac
     3181 cattcggaat ttcaattacg attcgaggat gattatcata aggaaatgaa tgttccttta
     3241 gactatgaat catttcttca taatattttc gattttattg cggagcaaga cataaaaaat
     3301 ggagttgatg ttcttttgac tgacgaagga aatctttact ttatggctta cggccagtcg
     3361 tataccattc gctctactgg tgtatcggat gtggttcgaa cttctgtaac agttatctct
     3421 aaagatgaag atgataataa agtggatttt ggtcagcact ttgcttgtcc agtccctgaa
     3481 aaagagcaaa cgaacaaacc taagtccgaa catgttttat agggatagaa aggagaagtc
     3541 atgcgagttg aagattatgc caactatgtc ggagacttat ccagttacta tctctcagat
     3601 gttgatgctt atcagagact gttagcacgc ttgggttttg ttgttggctt tgactttcaa
     3661 aatcaattga gcattattca tcagagaccg acagccagtt tatgctcaga ctttcaatcc
     3721 tggaaatcag ttgaccatat tgttagacga ggtcaaaaag ggattccaat tttattaaat
     3781 aaacaatcca aaatgtcaat tggatatgta tttgacataa gtcagacagt tttgacgaat
     3841 agagataaca agccaattgt ggagtggcaa tatgaagcag gtcgggatct atccatttta
     3901 gcagaccttg ttcatgagag actatcgctt agaccagaaa atgaggttgc tgcaattcgc
     3961 tatcttgcaa atcttgcaac gaaaggtatt ggttcaaaag ttcttgtcgg aatgaattta
     4021 gatgtggaaa ccgaatcaaa cttattacgc tttattgaac aaagttttga agctgtatta
     4081 tcaaatagac ttggaattgc actaaaaccg aaccaagact tgctagaaaa tggtctcggt
     4141 caatttagcc cacgtcagtt tctgatattt ggtgattatt tgaccagaat gtcgcaaaaa
     4201 attctcagga ttattcatca aaaaaagtat gagaaaattg cattaaaaga gcagacaaaa
     4261 gaactgattg agcggtataa tgaggttgta gaagaaagag gaggacaaag agatgaatca
     4321 agcattactg atcgagaaga tgaacacgac cttgacagtc aacgacttca gtcactgtca
     4381 atcaacagag gagatagtag aggtgattta tcgtctaaca ttacagaccc ttcgaaccaa
     4441 tcaacagatt cgggacgaga ttgggaaagc tctctacgcc aaggaaagat tggagtttct
     4501 gagcaaggaa gagaacaaga ccgaactact tttggaatta tatcagacag gacagctgat
     4561 tccacatttg atagcagtgg agaaagaatc acagagcatg gcggaacaaa tagaaagtca
     4621 tctgattcaa gaatggaagt tgaccgagga cttgaagacc aaggatatgt tgagctggat
     4681 cagccagatg aacaatcttc gtcaatccgt caaggaacaa gttagggaga atctaattta
     4741 catttagata aaatatcaac tgaagaattg catgatgtac ttcgaaaagg tactggtaca
     4801 cgaggtgggc gacttagagt tgctcacttt ttttctagtc aggaagatat aaaaattcaa
     4861 gctcagtttt tacaaaaaga atatgggtgg ggtggtgcta ctggtcctaa ttttcctatt
     4921 tcctacaatt atgactccag aggcttacac ttgacaagaa aggctgatgg ttataatgaa
     4981 acatttagtt ggaggaaagt tgcaggtgaa attgatagac ttttagaaaa tgaaacctat
     5041 ctgtctgatg acgaaagcaa gctttaccaa tacaatgaac agatattctc taattttcaa
     5101 gaatcaccat tatttgaatt tgataaactg gacaatggtc aagttaatgt atttttggaa
     5161 gatgaacttg tagcacgaat tgatacagtt ggtcaggtta gctatgttgt agagttagag
     5221 gaccgtttta agtttgaaat tgatgagtat gttcaaaacc tagaaactag tttgctgata
     5281 gaaaaaatca gtcagcatga gcagttggat ctctttgatg attcagcttt tgatgatagt
     5341 agtgttgatg acacaatatc tgttgcggaa ggtatcaatt cagcagacca tatcactcct
     5401 tcacagtcca ctaggaaacc tgatttatta gataactaca ttctagataa tttaccacat
     5461 tcactctctc cctccgaacg cttagacaat aacttagaag cgattcgaat cataaaaaaa
     5521 ttagatttgg aaggtag
//
LOCUS       DASFQD010000132         5459 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.133, whole genome shotgun sequence.
ACCESSION   DASFQD010000132 DASFQD010000000
VERSION     DASFQD010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5459
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.133"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            16..1449
                     /locus_tag="U1021_001978"
     CDS             16..1449
                     /locus_tag="U1021_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002358345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HEM4712475.1"
                     /translation="MSKLPKNFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVA
                     REITAGVLEGKYYPNHEAIDFYHRYKEDIALFAEMGFKCFRTSIAWTRIFPKGDELEP
                     NEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHLVTEYGGFRNRKTIEFFARFAETC
                     FRRYKDKVKYWMTFNEINNQANYQEDFAPFTNSGIVYQEGENREAVMYQAAHYELVAS
                     ARAVKIGHEINPDFQIGCMIAMCPIYPATCKPSDILMAQKAMQKRYYFADVHVHGFYP
                     EHILRYWERKGISVDFTEKDREDLLEGTVDYIGFSYYMSFAIDSHRENNPHYDYLETE
                     DLVKNTYVKASDWEWQIDPEGLRYALNWFTDMYHLPLFIVENGFGAIDQVEEDGMVHD
                     DYRIDYLGAHIKEFIKAVDEDGVDLMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDE
                     GNGSYARSPKRSFAWYKNVIATNGEEV"
     gene            1531..1671
                     /locus_tag="U1021_001979"
                     /pseudo
     CDS             1531..1671
                     /locus_tag="U1021_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006532260.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1733..2071
                     /locus_tag="U1021_001980"
     CDS             1733..2071
                     /locus_tag="U1021_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712476.1"
                     /translation="MESIVGIVVIVVVTVVLVYLLTNMWKIRAASVGQTDDTTLYFVR
                     FKGVNPPDLANSSVFNQVAKIKCAKGDTYQVTSTVNDVKLKDLIMDEFQLKSSEVVVY
                     YPPRLFFYAS"
     gene            2249..2563
                     /locus_tag="U1021_001981"
     CDS             2249..2563
                     /locus_tag="U1021_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003037418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose transporter subunit IIB"
                     /protein_id="HEM4712477.1"
                     /translation="MVKALIICAGGMSSSLIAKKTQTLLEEQGHKVEMNAVGVPEGGK
                     KINAAEYDLYLISPQTKMHFKQFEEAGKKVGKPVVQIPPQAYIPIPMGIEKMAKLVLD
                     NI"
     gene            2610..4583
                     /locus_tag="U1021_001982"
     CDS             2610..4583
                     /locus_tag="U1021_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM4712478.1"
                     /translation="MLNTKEKMILQYLYQHQNGFSTSKVLAEHLSYTDRTIRTYIKKL
                     ISEISEEETGFAILSKQGYGYQLRISDEEKYHRFLSENQLVFGVDYSDAENRHKQILN
                     KLIFEEECILFDDLADQLFVSRSTLSHDFKHIREHLASYGLSIESKPYKGVYVVGEER
                     QKRHFIMDYFFSEHFYQNIHHFLSNDKSLALPLSFEELTIVVLDECRDSQLKLSDYII
                     QNLVIHLGLAIQRYQKGFTISPVTIDKEKYAEELAVATKIARRLSHRLEPQNRFPEEE
                     VVYIALHLISKTQLEVEKSSDRLLLRQALFEVLGRYDDEYGYQFSHDFSLIEGLLTHL
                     EVLVERLRHNLHIDNPLLDDIKTTYHDIFDLTQSLMAELSVFHSYSLSESEIAYVALH
                     LMASLERQKEKYKLNVLVICATGYGSAQMLKNRIKNELGQQVSISDVIGYYDLDNQKL
                     QGIDVIMSTIDLSGLVFKVPVITVSVFLTDQEVKEVKQRLAALRPSLQKPQVVEKESN
                     LEKYFDQYFSEQRFLVVESAEKEMLLKQMISQLESEGLGNHQEFYKLIEARESLSTLV
                     FDKDIAVPHPLKPISEKHMISVAVIKNGLYWEEGYGQIRLVFLVSPSIYTNEGLSTIT
                     NRLVDLVDLPEVKKDIINSPDFETFKHVFLQRE"
     gene            4594..4908
                     /locus_tag="U1021_001983"
     CDS             4594..4908
                     /locus_tag="U1021_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018380105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose transporter subunit IIA"
                     /protein_id="HEM4712479.1"
                     /translation="MNTEELQMAAFGIILSSGNARSVIHEAFAAMREGDYDKAEELLE
                     AANADMLEAHHSQTGLLQEYASGTEVKVEIIMVHAQDHLMTTMTLREVALEMLALYRK
                     VG"
     gene            4923..5435
                     /locus_tag="U1021_001984"
     CDS             4923..5435
                     /locus_tag="U1021_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712480.1"
                     /translation="MSKGMASKKLQKTPEQLKQESKRKSQLFNRYMLFRYSLAVFFFA
                     NLYWLLVQLFQPSLYLILPSLMLIAIIIATAEQFKLYSAEESRLTKTEFVLRAQAILQ
                     GLIVVLVILGHISTLFPTFSNHISAKLFVIALQLLGLALVVLNIKRLEQVRQNTDKYY
                     LRFQIIRKYL"
BASE COUNT         1707 a          881 c         1181 g         1690 t
ORIGIN      
        1 atacaggagg caattatgtc taaattacct aaaaattttt tatggggtgg agcagtagca
       61 gcccaccaac ttgaaggtgg ctggcaagaa ggtggaaaag ggatttctgt agcagatgtg
      121 atgactgctg ggagacacgg ggtagctaga gaaatcacag ctggcgtatt agaaggaaaa
      181 tattatccta atcatgaggc cattgatttt tatcatcgct acaaagaaga tattgcactc
      241 tttgcagaga tgggcttcaa gtgtttccgt acttcaattg catggacacg catttttcca
      301 aagggcgatg aactggaacc aaatgaagct ggcttgcagt tttatgatga cttatttgat
      361 gagtgtttaa aatatgggat tgaacctgtc gtcaccctat cacactttga attaccttat
      421 catttggtaa cggagtatgg tggttttaga aatcgtaaaa ctattgagtt ttttgcgcgt
      481 tttgctgaga cctgcttccg tcgttacaag gataaggtca aatactggat gacctttaac
      541 gagattaata accaagcaaa ttatcaggaa gattttgcac cttttaccaa ctcaggtatt
      601 gtttatcaag agggtgagaa tcgtgaagca gttatgtatc aagcggccca ttatgaatta
      661 gttgcctctg cacgcgctgt taaaattgga catgaaatta atcctgactt tcaaattggt
      721 tgtatgattg ccatgtgtcc gatatatcct gcgacttgca aaccatctga tattttgatg
      781 gcacaaaagg cgatgcaaaa acggtattac tttgcagatg ttcatgtgca tggtttctac
      841 cccgagcata tcttgcgcta ctgggagaga aaaggtatta gcgttgattt cacagagaaa
      901 gatcgcgaag atttgctaga aggaacagtt gattacatcg gtttctcata ctatatgagt
      961 tttgctattg attctcaccg cgagaataat cctcattacg attatcttga gacagaggac
     1021 ttggtaaaaa atacctatgt caaggcttct gattgggaat ggcaaattga cccagaagga
     1081 ttgcgctatg cattaaactg gtttacagat atgtatcatc tgccactttt tatcgtagag
     1141 aatggctttg gtgcaattga ccaagttgaa gaagatggca tggtacatga tgattaccgc
     1201 attgactatc ttggagcaca tatcaaggag tttatcaaag cagttgatga ggatggggtt
     1261 gacttgatgg gatatacgcc gtggggctgt attgacctgg tgtcagcagg gacaggtgaa
     1321 atgcgcaaac gctatggctt tatctatgtt gataaagatg atgaaggcaa tggaagctat
     1381 gcacgttctc ctaaacgctc attcgcatgg tataaaaatg ttatcgcaac aaatggtgag
     1441 gaagtttaat gagaagacct ctgtagcgta atagctacat gggtcttcat ttatgttttt
     1501 tagtattggt atgttaaagg agaaaattgc atggttggtt ttatcgcagt ttgcttaact
     1561 acctttggat ttgtacctcg ggttatcaag gtagttaaga caaaggatac agagtcgatt
     1621 tcgttaggaa tgtatatgat gtctgtgaca gggatgtcct ttttaaacca ccaagataag
     1681 cgttttttct agttgtttgt aagtgtatcg tatcttggaa aagaggttta ttatggaatc
     1741 tatagttgga atagttgtca ttgtagttgt tacggttgtt ctggtttatt tattaactaa
     1801 tatgtggaaa atcagagcgg cttcagttgg tcaaacggat gacactacgc tatactttgt
     1861 aagatttaag ggggtaaatc cgccagactt agcaaatagt agtgttttta atcaagtagc
     1921 caaaatcaaa tgtgctaaag gagataccta tcaagtcact tcaacagtca atgatgtgaa
     1981 actgaaagat ttgattatgg atgagtttca gctcaaatct tctgaggttg tagtttacta
     2041 tcctcctcgt cttttctttt atgcatcata gtcgcaactc ttcggagttg ctattttttt
     2101 gtttctggag agtagcggaa aaaaggttta tatgagtagc gaaatttccg tagtggtaag
     2161 gaaatacttc ctatggaaaa tgtaagcgcg ttcatgtaaa ataaaatcat aacaaaagta
     2221 aataataaaa tagttggagg aaaatcctat ggtaaaagct ttgattatct gtgcaggagg
     2281 catgtcttct tcactcattg ctaaaaaaac acaaacactt ttggaagaac aaggtcataa
     2341 agtagaaatg aacgctgttg gtgttccaga aggtggtaaa aaaattaatg cggcagagta
     2401 tgacttgtac ttaattagcc cgcagacaaa aatgcatttt aagcaatttg aagaagcagg
     2461 taagaaggta gggaagccag ttgtccaaat tccacctcaa gcttatatcc caattccgat
     2521 gggaattgaa aaaatggcta aattggtctt ggataatatc tagttctttg ctatcataga
     2581 tggtatattg atttgaaaag aggctagtta tgctaaatac taaggaaaaa atgatattac
     2641 agtatcttta tcagcaccag aatggttttt caaccagtaa agtattggca gagcatcttt
     2701 cttatacgga tcgtaccatc cgaacctata tcaaaaaatt aatttccgaa atatccgagg
     2761 aagaaacagg ttttgcgatt ttatccaaac aaggttatgg ctatcagctt cgaattagcg
     2821 atgaggaaaa ataccatcgt ttcttatctg aaaaccaact agtatttggg gtggattata
     2881 gtgatgcaga aaatcgccat aaacaaatcc tgaataaatt gatatttgaa gaagaatgta
     2941 tcttatttga tgatttggcg gaccagctgt ttgtcagtag atcaaccttg tctcatgatt
     3001 tcaagcacat tagggagcat cttgcttctt atggtttgag catcgagagt aagccctata
     3061 agggagtcta tgtggttggt gaagaacgtc aaaaacgtca cttcatcatg gactatttct
     3121 ttagtgaaca tttttatcag aatatccatc attttttatc caatgataaa agtctagcct
     3181 tacctctatc ttttgaagag ctaacaattg tagtcttaga tgagtgtcgt gatagtcagt
     3241 tgaaactatc tgattatatt atccaaaatt tagttattca tttaggttta gctatccaac
     3301 gctatcaaaa aggttttaca atttctcctg tcaccatcga taaggaaaag tatgctgaag
     3361 aattggcagt agctacaaag attgctaggc gattatccca tcgactggaa cctcagaata
     3421 ggtttcctga ggaagaagtg gtctacattg ctctacactt gatttcaaaa acacaattag
     3481 aggtggagaa gtcatcggac cgcctcttgt tgcgccaagc actttttgaa gttttagggc
     3541 gttatgatga tgaatatggt tatcaatttt cacatgattt ttccttgata gaaggtttgc
     3601 taacacatct ggaggttctc gtagaacgac tccgtcacaa tctccatatt gataaccccc
     3661 tacttgatga tattaaaaca acttatcatg atatcttcga tttgacacaa tcactaatgg
     3721 ctgaactttc agtttttcac tcttatagct tgtccgagtc agaaattgcc tatgtagctc
     3781 tacacttgat ggcttccttg gaacggcaaa aagaaaaata caaattaaat gttctggtta
     3841 tctgtgcaac aggctacggt agtgctcaga tgctgaaaaa taggattaaa aatgaacttg
     3901 ggcaacaggt gtccatatca gatgtcatcg gttactatga tttagataat caaaagttgc
     3961 aggggataga tgtgataatg tcaaccatcg acttatctgg tttggtgttt aaggtccctg
     4021 ttataactgt cagtgtcttt ttaacggatc aggaagttaa ggaagttaaa caacgattgg
     4081 cggccttgag acctagtctc caaaaaccac aggtagtgga aaaagaaagt aacttggaga
     4141 aatactttga tcagtacttc tcagaacaac gatttttagt tgttgagtca gctgaaaaag
     4201 aaatgttatt aaagcaaatg atttcacagt tggagagcga aggtcttgga aatcaccagg
     4261 aattttataa attaattgag gcgcgtgaaa gcttgagtac attggtattt gataaagata
     4321 tagctgttcc tcacccccta aaacccatta gcgaaaagca catgatttct gttgcggtta
     4381 taaaaaatgg tctatattgg gaagaaggct atgggcagat tagattggtt ttcttagtga
     4441 gtccatctat atatacaaat gaaggtctat caaccattac caatcgattg gtagatttgg
     4501 tagatttacc agaagtcaag aaagacataa taaactctcc tgattttgaa acattcaaac
     4561 acgttttttt acaaagagaa tagaaggtga catatgaata cagaagaatt acaaatggct
     4621 gcatttggga tcatcctcag tagtggcaat gcaagaagtg ttatccacga agcttttgct
     4681 gctatgagag aaggtgatta tgataaggca gaagagttat tggaagccgc caatgctgac
     4741 atgcttgaag cccaccattc tcaaacgggt ctcctacagg aatacgcaag cggtactgaa
     4801 gtgaaggtag agattattat ggttcatgcg caagatcatt tgatgacaac aatgacttta
     4861 cgtgaggtag cgcttgaaat gttagctttg tatcgtaaag ttggttagaa agaggatatg
     4921 ggatgagtaa gggaatggca agtaaaaagc tacagaaaac accagaacaa ttaaaacaag
     4981 agtctaaacg caaaagtcag ctctttaatc gctatatgct gtttcgttat agtttagcag
     5041 tgttcttctt tgcaaatcta tactggcttc tggttcaatt atttcaacca agtttgtatc
     5101 taatcctgcc ctcgcttatg ctgattgcaa taatcattgc gacggcagaa caatttaagt
     5161 tgtatagtgc tgaggagtct cgattgacaa agacagaatt tgtattaagg gcacaagcaa
     5221 tcttgcaagg gttaattgtg gttttagtga ttttgggtca tatctcaacc ctctttccaa
     5281 ctttttcaaa tcatatatct gctaaactct ttgttattgc cttgcagttg ttaggtcttg
     5341 ctttagttgt tctcaatata aaaaggttgg agcaggtaag gcaaaatacg gataaatact
     5401 acctacgttt tcaaataata agaaaatatc tttaaaattt taggaggtct tctcatgga
//
LOCUS       DASFQD010000133         5446 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.134, whole genome shotgun sequence.
ACCESSION   DASFQD010000133 DASFQD010000000
VERSION     DASFQD010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5446
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.134"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            383..1897
                     /locus_tag="U1021_001985"
     CDS             383..1897
                     /locus_tag="U1021_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEM4712481.1"
                     /translation="MIYIDPPYNTGKDFVYSDKFQMSEEELADEMDLRDEDGLQRVGL
                     TKNEKSSARYHSDWLNMMYPRLVLARNLLKDSGVIFISIDDNEQANLKAICDEIFGEE
                     NFVADVIWERAFAPVNLKKHFSESHDYILVYAKNVEFAVNHGIPRSEDSNSRYQNPDN
                     DVRGPWTSGDLSVGPAVPSNIYEIISPSGRSIFPPSGRSWLLSKERFEEFIADNRIWF
                     GANGDNVPRIKRFLSEVKNTVTPMTIWKYADVGHSQSASQDLKKLFDGKAYFTYPKPV
                     PLMKQIVQLYSEKDGLILDFFAGSATTADAVMQLNAEDGGNRKYILCTLDEQVTDKSA
                     AKEAGYETIDQISRERIRRAAKKIQEEHPETVGKQDLGYRAYKLDTSNFKDVSQTPDS
                     FTQADLFDSVSNIKDGRTDLDLLFQIMLTWGMELSLPIAKTQIDGTDIYNVADGAMIA
                     CFADEISENVLRQIAKEEPLRAVFKDESFVNSAAKINLGQIFKEEAPGTKVKVV"
     gene            1901..4999
                     /locus_tag="U1021_001986"
     CDS             1901..4999
                     /locus_tag="U1021_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEM4712482.1"
                     /translation="MKLQFKQQQFQLDAVASVVAVFAGQGKHSGFDYHMDKGQGMDAE
                     LDMNFIGFRNAPIQLSQDIISQQVRSQQLRYGLKPSENLSIQKVDGRPSYNLTIEMET
                     GTGKTYTYIRTLMELNKQYAWLKFIIVVPSIAIREGVLNSFEIIADHFQMEYDKKPRY
                     FVYDSSRLGELDKFANSSDIQVMIINSQAFNATGADARRIHTEQESFRWRKPIDVIAA
                     TNPILIIDEPQSVEGKKTKERLEDFKPLFTLRYSATHKDKHDMIYRLDALDAYNKKLV
                     KKIAVKTVEQTSTTGTQGYLYLQELVPQKSGAPKARIEFEMRTKSGDVKRVTKLVEEP
                     FALFEESGNLPAYQGGWTLSHFDAREGENSIQIGANRKLYVGEVIGETNEDDIRRIQI
                     RETIASHLQKEERLYKRGIKVLSLFFIDEVAKYKCYDEQNDAYNGTYAQMFEEEYEAQ
                     VKALLADPNLHGSNFWHYLNKHQEGNPVHAGYFSVDKVKKSDKVKFVDYKSATEKKNN
                     QSNDKDAYDLIMKDKERLLSFEEPVRFIFSHSALKEGWDNPNVFQICTLKNTGTETEK
                     RQKIGRGMRLAVDQKGVRQDEELLGADVHNINKLTVIANESYEDFAKNLQRELKEILA
                     DRPSKVEVDLFVDKILENEAGQKLTVTKEVAKEIEYQLIKQDYIDSKGNLTAIYFEQK
                     ETSQFTLSENLAGYEVAVKDILETIYDANRYKIERENDSEVVFAREINPDNYNRQEFK
                     RLWESIHHKSTYYVEFDDEELIEKSVKALNESLFVKKPSYMITEAEAREMQAKHGLDF
                     KVNKNGKRQSVLDKSSIQLRYDLLGEIASRTELKRKTVANILKQISPSKFDMFSYNPE
                     AFIQQVSRLINEQKASQVIEHIRYNILEETFDSSIFTDNPLSGKVSDANMLKSEKGVY
                     NYVKVDSGTERKFKEDLERFDDVMVYAKLPSKFKISTPLGDYNPDWAIAFRDGSVKHV
                     YFVAETKGSMSSLQLKGAELAKIECAKAHFKALKEKGLIADDRIYDVVDSYEKLLEIV
                     RG"
     gene            5221..5446
                     /gene="tnpA"
                     /locus_tag="U1021_001987"
                     /pseudo
     CDS             5221..5446
                     /gene="tnpA"
                     /locus_tag="U1021_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148688.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
BASE COUNT         1650 a         1072 c         1285 g         1439 t
ORIGIN      
        1 gcttggagac tacactcaag ttgaaaagct agacctaagg tcaaaagatg ttttatcaga
       61 caacattgca aaaattggtc agctttttcc tgaggttcta acagaaagta gcgatgaaaa
      121 tggcaggttg cgtccagcta ttgactttga caagctacgc caattccttt caagagatat
      181 tgttgaaggg cgggagtcct acgagtttac ctgggtcggc aaacgcggag cgattgccga
      241 ggctggtaaa cccagcctca aaaccctccg gccagatctt gaggaaagtg ttgattttga
      301 caagtctgag aatatcttta taactgggga caacctggaa gtcctcaagg tcttgcagga
      361 gtcttatctg ggtaagattg atatgattta cattgacccg ccttacaata caggcaagga
      421 ctttgtctac tcggataaat tccagatgag cgaggaagaa ctggcagatg aaatggatct
      481 gcgtgatgag gacggtttgc aacgggtggg cttgaccaag aatgaaaaat cctccgcccg
      541 ctatcattcc gactggctca atatgatgta ccctcgccta gtccttgccc gcaacctcct
      601 caaagatagt ggagttatct ttatctccat tgacgataac gaacaagcca acctcaaagc
      661 tatctgtgat gagatatttg gggaggagaa ttttgttgct gatgtcatct gggagagagc
      721 atttgcacct gtaaacttga aaaagcattt ttcagaaagt catgattata ttttagtata
      781 tgcaaaaaat gtagaatttg ctgtcaatca tggaatacct agaagcgaag actcaaatag
      841 tagataccaa aatcctgata atgatgttag aggaccttgg acaagtggtg atttatcagt
      901 aggaccagca gttccttcaa atatttatga gataatttct cctagcggaa gatctatttt
      961 tcctccaagc gggagaagtt ggttgctgag taaagaaaga tttgaagaat ttattgctga
     1021 taatcgtatt tggttcgggg ctaatggaga taatgtgcct aggataaaaa gatttttatc
     1081 agaagtaaaa aatacagtaa ctccaatgac gatttggaag tacgctgatg tcggtcattc
     1141 tcagtctgct agccaagact tgaaaaaatt atttgatggt aaggcatatt tcacctatcc
     1201 aaaaccagtt ccgttgatga agcaaattgt tcaattgtat tcagaaaaag acggcctgat
     1261 cctcgacttc ttcgctggct ctgcaaccac agcagatgct gttatgcagc tgaatgcaga
     1321 agatggtggt aatcgcaagt atattctctg tacgctggac gaacaagtga cagacaagtc
     1381 agctgctaag gaggctggct acgaaaccat tgaccagatt tctcgcgagc ggattcgtcg
     1441 ggcagctaaa aagattcagg aagaacatcc tgaaaccgtc ggcaagcaag accttggtta
     1501 tagggcttac aagctagaca cttccaattt caaagatgtc agccaaacac cagatagctt
     1561 tacgcaggca gaccttttcg acagcgtttc taacatcaaa gacggtcgga cagaccttga
     1621 cttgctcttc cagattatgt tgacttgggg catggagcta tctcttccga ttgcgaaaac
     1681 tcaaatagac ggcacagaca tttacaatgt agcagacggg gctatgattg cctgctttgc
     1741 agatgagatt tcggaaaacg tcctccgtca aattgccaaa gaagaacccc ttcgtgctgt
     1801 cttcaaggac gaatcttttg tcaactccgc agcaaaaatc aacctcggtc aaatcttcaa
     1861 agaagaagcc ccaggtacca aagtgaaggt ggtgtagggg atgaaacttc aatttaagca
     1921 acagcaattt cagttagatg cggtggcctc tgttgtggct gtttttgctg gtcagggcaa
     1981 gcatagtggt tttgattacc acatggataa aggtcaggga atggatgcgg aactggatat
     2041 gaattttatc ggtttccgca atgctcctat ccagctttca caggacatta tcagccagca
     2101 ggtacgaagt cagcagctcc gctatggact taaaccttcc gaaaacctat ccatccaaaa
     2161 agtcgacggt cgtccgtctt acaatttgac cattgagatg gagacaggga cagggaagac
     2221 ttatacctac atccgtaccc tgatggagct caacaagcag tatgcctggc tcaagtttat
     2281 catcgtggtg cccagcattg ccattcggga gggggtgctc aactcctttg aaattatagc
     2341 agaccatttc cagatggagt atgacaagaa gccacgctac tttgtctatg actctagccg
     2401 tttgggagag ctggacaagt tcgccaattc ctcggatatt caggtcatga ttatcaactc
     2461 ccaggccttt aatgccactg gagcggatgc tcgtcggatt cacaccgagc aggaaagttt
     2521 ccgctggaga aagcccatcg atgtcatcgc ggcgaccaat ccgattttga ttatcgatga
     2581 gccccagtcg gttgagggga aaaagaccaa agaacgcttg gaggacttca aacccctatt
     2641 taccctccgc tactcagcaa ctcataagga caagcacgat atgatttatc gtctggatgc
     2701 cttggacgcc tacaataaga agttggttaa gaagattgcc gttaagaccg tggagcagac
     2761 ttctaccaca ggtacacaag gctaccttta tctgcaagaa cttgttccgc aaaaatcagg
     2821 agctccaaag gctcggattg agtttgaaat gcggaccaag tcaggcgatg tcaaacgggt
     2881 gaccaaattg gttgaagagc cttttgctct ttttgaagag tcaggcaacc taccagccta
     2941 tcaaggcggt tggaccttga gccattttga tgcgcgtgaa ggtgaaaatt ccattcaaat
     3001 cggtgccaat cgcaaactct atgtgggcga agtgattggg gaaaccaacg aagatgatat
     3061 ccgtcgtatc cagattcggg aaaccattgc cagtcacctg caaaaagaag aacgccttta
     3121 caaacgaggt atcaaggtgc tatccctttt cttcatcgat gaagttgcca agtataagtg
     3181 ctatgatgag caaaatgatg cctacaatgg cacctatgcc cagatgtttg aagaagagta
     3241 tgaagcccag gtcaaggctt tattggctga tcccaacctc catggaagta acttttggca
     3301 ttatctcaac aagcaccaag aaggcaatcc tgttcatgca ggttatttct ctgtcgataa
     3361 ggtaaaaaaa tcggataagg tcaagtttgt ggactacaag tctgctacgg aaaagaaaaa
     3421 taaccagtct aacgacaagg atgcctatga tttgataatg aaggacaagg aacgtctgct
     3481 gtcttttgag gaacctgttc gctttatctt ttctcactca gccctcaaag aaggctggga
     3541 caatcctaat gtcttccaga tttgtacctt gaaaaataca ggtacagaaa cagaaaaacg
     3601 acaaaagatt ggtcgtggga tgcgtctagc cgtcgaccaa aaaggtgttc gtcaggatga
     3661 ggagctttta ggagctgatg ttcataatat taacaagttg accgtcatcg ccaatgaaag
     3721 ttatgaagac tttgccaaga acttgcaaag agaactcaag gaaatcttgg ctgaccgacc
     3781 aagcaaagtg gaagtggatc tttttgtcga taagatcttg gaaaatgaag ctggtcaaaa
     3841 actgactgtc accaaggaag tggctaaaga gattgaatac cagttgatta agcaagatta
     3901 tattgacagc aaggggaatc tgaccgctat ctattttgaa caaaaagaaa caagtcagtt
     3961 tactctatct gaaaatctgg caggctatga agtggctgta aaagatattc tagaaacgat
     4021 ttacgatgcc aatcgttaca agattgaacg tgaaaatgat tctgaagtgg tttttgcacg
     4081 agaaatcaac cctgataatt acaatcgtca agagtttaaa cgtttgtggg aaagtattca
     4141 tcacaagtcc acctactatg tcgaatttga tgatgaggag ttgattgaaa agtctgttaa
     4201 ggccttgaat gagtccttgt ttgttaaaaa gcctagttac atgattacag aggctgaagc
     4261 aagggaaatg caggcgaaac acggtttgga tttcaaggta aataagaacg gcaagcgtca
     4321 gtctgtgctg gataagtctt ctattcaact ccgctatgat ttgctgggtg aaattgccag
     4381 tcgcacggag ttgaaacgga aaacagtcgc caatattttg aagcagattt cgccaagcaa
     4441 gtttgatatg ttttcctata accctgaggc atttatccaa caagttagta ggctcatcaa
     4501 tgagcaaaag gcgagtcagg tgattgagca tatccgctac aatatcctag aggaaacttt
     4561 tgatagttct atttttacgg acaatccttt gagtggtaag gtgtcagatg caaatatgct
     4621 caagtctgag aagggtgttt ataattatgt gaaggttgat tctggaacgg agaggaagtt
     4681 caaagaggac ttggagcgat tcgacgatgt catggtctat gccaaattgc ctagcaagtt
     4741 taagatttcc acaccgctgg gtgattacaa tccagactgg gccattgcct tccgagatgg
     4801 ttcggtcaag catgtttact tcgtagctga aaccaaaggt tccatgtcta gtttgcaact
     4861 gaaaggggcg gagttggcaa agattgagtg tgcaaaggcc cacttcaaag ccctaaaaga
     4921 aaaaggattg attgcggatg atcggattta tgatgtggtt gattcctatg aaaaattatt
     4981 agaaatcgtg agaggatagg ttgctgagca atccttctcg ccactgaagg agaatattta
     5041 tgggtgcgtt tttgtttttt acatttgcga tttgttatct ggtgggcatt gttgccatag
     5101 tcaaggcttt tgttgtcccc tgaaagaggc tgggcaaaaa ctagccgctc atacataaaa
     5161 aactccaaac gcgatacaat aaaggtgttc aagcctattg taaagcgaga ggagaaaagt
     5221 atggcacaaa aggcatatag tttatcacat acaaaatggt tgtgttctac cacattgtct
     5281 tcacacctaa gtatagacga aaaatcatct ataatcaata tcgaagtagt ttgggagaaa
     5341 tattccgacg tttgtgtagt tataaaggcg tagaaattat cgaaggacat ctgatgcagg
     5401 atcatgttca tatgttagtc agtattcctc cgcgattaag tgtatc
//
LOCUS       DASFQD010000134         5438 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.135, whole genome shotgun sequence.
ACCESSION   DASFQD010000134 DASFQD010000000
VERSION     DASFQD010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5438)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5438)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5438
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.135"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..506
                     /locus_tag="U1021_001988"
     CDS             <1..506
                     /locus_tag="U1021_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HEM4712483.1"
                     /translation="LSDQQILVLDGSALTLVAKQNRKNFPCKQVILTPHQKEWERLSA
                     IPVADQTSQRNLEALQSFQENTILVAKSSATQILKNQPNQVTPIGAGGPYQATGGMGD
                     TLAGMIAGFAVQFPHVQLYERILVATYLHSYIADQLAQDYYLVKPTDISRNIQKTMLQ
                     FQTQTTA"
     gene            complement(688..>5438)
                     /locus_tag="U1021_001989"
     CDS             complement(688..>5438)
                     /locus_tag="U1021_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEM4712484.1"
                     /translation="KETFSLRKYKIGTVSVLLGAVFLFAGAPSVAADELTSLVETKVE
                     ATVPEAIVSESASESPVVEELVDTSVEATPTDVTTTDNIEETLGSEALENITNTEVEA
                     TQPAVETPAISEKKVEEEEKLSIADETTAISNQEEAKPQNIDSNTIITVPKVWDSGYK
                     GEGTVVAIIDSGLDVDHDVLHISDLSTAKYKSEKEIEAAKEAAGISYGEWFNDKVVFG
                     YNYVDVNTVLKEEDKRSHGMHVTSIATGNPTQPVAGQLMYGVAPEAQVMFMRVFSDLK
                     ATTGAALYVKAIEDAVKLGADSINLSLGGANGSVVNMNENVTAAIEAARRAGVSVVIA
                     AGNDGTFGSGHSNPSADYPDYGLVGAPSTARDAISVASYNNTTVGSKVINIIGLENNA
                     DLNYGKSSFDNPEKSPVPFEIGKEYEYVYAGIGQASDFDGLDLTGKLALIKRGTITFS
                     EKIANATAAGAVGVVIFNSRPGEANVSMQLDDTAIAIPSVFIPLEFGEALATNSYKIA
                     FNNETDIRPNPEAGLLSDFSSWGLSADGELKPDLAAPGGAIYAAINDNDYANMQGTSM
                     ASPHVAGAAVLVKQYLQATYPTKSPQEIEALVKHLLMSTAKAHVNKETTAYTSPRQQG
                     SGIIDTAAAISTGLYLTGEDGYGSITLGNVEDTFSFTVTLHNITNEDKTLNYSTQLTT
                     DTVQNGLITLAPRLLAEIPGGKVTVKANSSTTVTINVDASSFAEELTGLMKNGYYLEG
                     FVRFTDVADGGDIVSIPYVGFRGEFQNLAVLEEPIYNLIADGKGGFYFEPVTAQPDTV
                     DISHHYTGLVTGSTELIYSTDKRSDFAIKTLGTFKNEAGYFVLELDESGKPHLAISPN
                     GDDNQDSLAFKGVFLRNYTDLVASVYAADDTERTNPLWESQPQSGNKNFYSGDPKNPK
                     SSIIYPTEWNGTDSEGNALADGKYQYVLTYSSEVPGAAVQTMIFDVIIDRESPVITTA
                     TYDETNFTFNPRPAIEKGESGLYREQVFYLVADASGVTTIPSLLENGDVTVSDNKVFV
                     AQNDDGSFTLPLDLADISKFYYTVEDYAGNISYEKVENLISIGNEKGLVTVNILDKDT
                     NSPVPILFSYSVTDETGKIVAELPRYAGDTSVLKLPFGTYTFDLFLYDTEWSSLAGET
                     KAVVTISEENSTAEVNFYVTLKDKANLLVDIDALLPSGSTIQLVTADGQTIQLPNAKY
                     SKTDYGKFVPVGTYTILPTLPEGYEFLEELDVAVLANQSNVKKLTLINKVALKELIAE
                     LAGLEETARYYNASPELQTAYAKALEDANAIYANKHNQAQVDSALASLVAAREQLNGQ
                     ATDKEKLIAEVSNYTPTQANFIYYNAENTKQIAYDTAIRSAQLVLNQENVTQAVVNQA
                     LADLLAAKANLDGQKTDISALRSAVSVSSVLKATDAKYLNASENVKQAYDQAVEAAKA
                     ILADESASQASVDQALAVLTSAQAELDGIATSTNDAKEPANTSTDKKDEGTVTPPPID
                     SEKVDVQAPPVKDTGNSGHVPIGQKPNPQPTLPRPVTLQASLSSPNQEKQVTQLPNTG
                     ENDTRYYLVLGVIIGLGTLLVSKRRHKEEV"
BASE COUNT         1490 a         1169 c         1086 g         1693 t
ORIGIN      
        1 atttatctga ccagcagatt ttagttcttg atggctcagc ccttacctta gtcgcaaagc
       61 aaaacagaaa gaacttcccg tgtaaacaag tcatcctgac accccaccag aaagaatggg
      121 aacggttatc agccattccg gttgctgacc aaacaagcca aagaaatctt gaagccctgc
      181 aatcttttca agaaaataca atccttgtag ctaaaagttc tgctactcaa atcctaaaaa
      241 accagccaaa ccaagtcacc ccaattggag ctggtggtcc ctaccaagca acaggaggta
      301 tgggagatac tcttgcaggt atgattgcag gatttgctgt acaatttccc catgttcaac
      361 tatatgaaag aatccttgta gcaacctacc tccactccta tattgctgac caactggctc
      421 aagattatta tcttgtaaag ccaactgata tctcaagaaa catccaaaag acaatgcttc
      481 aatttcaaac acaaacaacc gcctaatcaa tgattaagcg gtcttttata taacaaactc
      541 gtgattaaag cctgacaaat ggtagaaaat gatactcaat gcaaatcaaa agttgcctag
      601 gaaacgaagc cgaagataga actggagttc atcaaggcaa gttgacaatg gataattttg
      661 attttcgaag agtatgacta tattttctta gacttcttct ttgtgacgtc gtttgcttac
      721 caacagagtt cctagcccaa taatgacacc aagaacaaga tagtatctcg tatcattttc
      781 tccagtattt ggtagttgag tcacctgttt ttcttgatta gggctagata gactagcttg
      841 caaagtgact ggacgaggta aagttggttg ggggtttggc ttctgcccta tcggtacatg
      901 ccctgaattc ccagtatctt ttacaggagg tgcttgtaca tcaacttttt ctgagtctat
      961 aggtggaggc gttacagtgc cttcatcttt tttgtcagtg gaagtatttg ctggctcttt
     1021 ggcatcattt gttgaagtag caataccatc cagttctgcc tgagcgcttg tcagaacggc
     1081 tagagcttga tcgacacttg cttggcttgc agattcatca gctagaatcg ctttcgctgc
     1141 ttcaaccgcc tggtcataag cttgtttcac gttctcagat gcattgagat acttagcatc
     1201 tgtcgctttt aatacggaag aaacggatac tgcgctacga agggctgaaa tatcagtctt
     1261 ttgaccatct aagttggctt tcgctgctaa caagtcagcc aacgcttggt tgacaactgc
     1321 ctgtgttaca ttctcttggt tcaatacaag ttgtgctgaa cgaatagctg tatcataggc
     1381 aatttgtttg gtattttcag cattgtaata aataaagttt gcctgagtcg gtgtgtagtt
     1441 tgatacttca gcaattagtt tttccttatc agtagcctga ccgtttagct gttctctcgc
     1501 cgccacaaga ctggcaagtg ctgaatctac ttgtgcctga ttgtgtttat tggcatatat
     1561 tgcattggca tcttctaatg ctttagcata ggcagtttga agttctggac tagcattgta
     1621 ataacgcgct gtttcttcaa gtcctgcaag ttcagcgatc agttctttca gagcaacttt
     1681 attaatcaag gttaatttct taacatttga ctggtttgca agtactgcta cgtctaattc
     1741 ttccaaaaat tcatagcctt ctgggagggt tggaaggata gtgtaggtac caactggtac
     1801 aaatttacca taatcggtct tagaatattt agcatttggt agctgaatag tctggccatc
     1861 agcagttacc agttggatgg ttgagccaga aggtagtaat gcatcaatat ctaccagcaa
     1921 gttggcctta tctttcaaag tcacatagaa attcacctcg gcagtgctat tttcttccga
     1981 aattgtcaca actgcttttg tttcaccagc taggcttgac cattctgtat catataagaa
     2041 taaatcaaag gtgtaagtac caaatggtag cttaagaacg ctagtatcgc cggcatatcg
     2101 tggtaattct gcaacaatct tgcctgtttc atctgtgact gagtaagaga aaagtattgg
     2161 tacaggacta tttgtatctt tatcaagaat attgacagtt accaaccctt tttcattgcc
     2221 gatactgatc agattctcta ctttttcata gctgatgtta ccagcataat cctctactgt
     2281 gtagtagaat tttgaaatat ctgcaagatc aagaggcaat gtaaaggagc catcgtcgtt
     2341 ttgtgccaca aataccttgt tatcagaaac ggttacatca ccattttcta ataaggaagg
     2401 aatagttgtc acaccgcttg catctgctac aaggtagaat acttgctcgc gatatagacc
     2461 ggattctcct ttttcaatgg ctggacgagg gttaaatgta aagtttgttt catcataggt
     2521 agctgtggtg ataactggtg attctctatc gatgataacg tcgaaaatca tagtttgtac
     2581 tgctgcacct ggaacttcag atgagtaggt caaaacgtat tgatacttac catctgctaa
     2641 agcatttccc tcgctgtctg tcccattcca ttcagtaggg taaataatgc ttgattttgg
     2701 atttttagga tcaccactat agaagttctt attgcctgac tgtggttgac tttcccaaag
     2761 tggatttgtt cgctcagtat catctgcagc atagacgctt gcgactaaat ccgtataatt
     2821 tctcaagaag acacctttga aagcgagcga atcttggttg tcatccccat ttggcgagat
     2881 agctaaatga ggcttaccag actcatcaag ctctaaaaca aagtatcctg cttcattttt
     2941 aaatgtacca agtgtcttga tcgcaaagtc agatcgtttg tctgtagaat agattaactc
     3001 cgtacttcct gtaacaagac ctgtgtagtg atggctgatg tcaacagtat ctggttgtgc
     3061 tgtaacaggt tcaaagtaga agcccccctt gccatcggca ataagattgt aaatcggctc
     3121 ttctagaacg gctagatttt ggaattcccc acggaaacca acgtatggaa tgctgacaat
     3181 atcaccacca tcggctacat ctgtaaatcg aacaaaacct tcaagatagt aaccgttttt
     3241 cattaaacct gtcaattctt ctgcaaagct tgatgcatcg acattaattg taacagttgt
     3301 acttgaattg gctttcacag tcaccttacc gccaggaatc tctgctaata gacgcggagc
     3361 caaggtgatc aatccgtttt ggacagtatc cgttgttaat tgcgttgagt agtttaaagt
     3421 cttatcttcg tttgtaatgt tatgaagtgt gaccgtaaag ctgaatgtat cctcaacatt
     3481 tcccaaggta atgctgccat aaccgtcttc gccagtcaaa tataaacctg tagaaatagc
     3541 tgccgcagta tcgatgatac ctgaaccttg ttggcgtggg gaagtgtagg ctgttgtttc
     3601 tttgttcaca tgtgctttag cagtagacat aagcaagtgt tttactaagg cttcgatttc
     3661 ttgaggggac ttagtagggt aagttgcctg taaatattgt tttactagta cggctgctcc
     3721 tgctacgtgt ggtgaagcca tacttgttcc ctgcatgttg gcatagtcat tatcattgat
     3781 ggctgcataa atagcaccac ctggagcagc taagtctggt tttagctcgc catccgccga
     3841 cagaccccaa cttgaaaaat ctgaaagaag acctgcttct gggttagggc gaatatctgt
     3901 ttcgttattg aacgcaatct tatatgagtt agttgccaaa gcttcaccaa attccaatgg
     3961 aatgaagaca gatggaattg caatagctgt atcatcaagt tgcatgctta cattggcttc
     4021 acctggacgg ctattgaaaa tgaccacccc tactgcacct gcagctgttg cattggctat
     4081 tttttctgag aaggtaatcg ttccacgttt gatgagtgca agttttccag tcaaatctag
     4141 accatcaaaa tccgaagctt gaccgattcc cgcatagaca tattcatatt ctttcccgat
     4201 ttcaaatggt acgggacttt tctctggatt atcaaacgaa ctcttaccgt aattcaagtc
     4261 agcattgttt tctaagccaa tgatattaat tactttacta ccaaccgttg tgttattgta
     4321 agaagcgaca gaaattgcat cgcgagctgt tgaaggtgca ccgaccaagc cataatctgg
     4381 ataatcggct gacggattag aatgacctga accaaatgtt ccatcattac cagctgcaat
     4441 aacaacagaa acccctgcac gacgagcagc ctcgattgct gcagtcacat tttcattcat
     4501 gttaacaaca gagccgttag ctcctcccag gctgaggttg atgctatctg cacctaattt
     4561 tacagcatct tcaatcgcct ttacgtacaa tgctgcgcct gttgtagctt tgaggtctga
     4621 gaatacacgc ataaacatga cttgcgcttc aggagctaca ccatacatta attgtccagc
     4681 gactggttgt gtcggatttc ctgtggcaat actcgttacg tgcataccgt gtgagcgttt
     4741 gtcttcttct ttcaagacag tattcacatc aacatagtta taaccaaata caaccttatc
     4801 gttaaaccat tcaccgtagg aaatccctgc tgcttcttta gctgcttcta tctctttttc
     4861 tgatttatat tttgcagttg agagatctga aatatgcaat acatcgtgat caacgtcaag
     4921 accggaatct atgattgcaa ctactgttcc ttcgcccttg taaccactat cccaaacttt
     4981 aggtactgta atgatcgtat tactatcaat gttttgtggt ttcgcttctt cctgattaga
     5041 aatagcagta gtctcatctg ctatggaaag cttctcttct tcttctactt ttttctctga
     5101 aatagctgga gtttctacag ctggttgagt cgcttctact tctgtatttg tgatgttttc
     5161 aagagcttct gagccaagtg tttcctctat attatccgta gtggttacat cagttggggt
     5221 agcctccaca gaagtgtcaa ctaactcctc gacaacggga ctttctgagg ctgattcgct
     5281 gacgattgcc tcaggaacag ttgcttccac cttagtctct acaaggcttg tcaattcatc
     5341 tgcagctacc gatggtgcac ctgcaaacaa aaaaactgca cccaaaagaa cagacacagt
     5401 tccaatttta tacttccgaa gtgagaaagt ttctttct
//
LOCUS       DASFQD010000135         5353 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.136, whole genome shotgun sequence.
ACCESSION   DASFQD010000135 DASFQD010000000
VERSION     DASFQD010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5353)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5353)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5353
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.136"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            76..507
                     /locus_tag="U1021_001990"
     CDS             76..507
                     /locus_tag="U1021_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEM4712485.1"
                     /translation="MDTKFSVALHILTMISESKEILSSQALAESVGTNASYIRKVIAL
                     LKNAGLITSHQGRSGYQLSKSPKDISLLEIYLATQEVEHIRLFQIHQNANLTCPVGQH
                     IEGAMVPIFSSVEQELEHKLSRQSLDNVIDNLYQSAQETRI"
     gene            587..1571
                     /locus_tag="U1021_001991"
                     /pseudo
     CDS             587..1571
                     /locus_tag="U1021_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646441.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
     gene            1598..2443
                     /locus_tag="U1021_001992"
     CDS             1598..2443
                     /locus_tag="U1021_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM4712486.1"
                     /translation="MSYITTKNQYITVSNNKIAYRELSKGKSDIPLVMLVHLAATLDN
                     WDPKLLDLLAEKHHVIVLDLPGVGASQGKVAPTIPGMAEQAASIIKALGHEKINLLGL
                     SMGGFIAQEIVRLDSQLVNRLILAGTGPRGGFEVDKVTGKTFRYMLKAGLERVDPKRY
                     IFYNHDEAGRLEAEKVLGRMGQRSAAHADKDMNVPGFLTQLKAIKRWGREPQDDMTFI
                     TQPTLIVNGDKDMQVPTENSYTMHEKIKNSQLIIYPNAGHGSIFQNAEEFSKALLAFL
                     EETNA"
     gene            2436..3305
                     /locus_tag="U1021_001993"
                     /pseudo
     CDS             2436..3305
                     /locus_tag="U1021_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637456.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     gene            3298..4509
                     /locus_tag="U1021_001994"
     CDS             3298..4509
                     /locus_tag="U1021_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase family
                     protein"
                     /protein_id="HEM4712487.1"
                     /translation="MTKILLENLQLPNGQVLDNRFFKSAMSETLADSQGAPSDDLIAL
                     YDFWAKQGMGVLVTGNVMVDGRYRGEPGNVVLDSDAHLAQFQKWAAIGKKNGVPIWLQ
                     LNHPGKQMYRSINQTPIAPSAIPISGGSASAFRPPREMTVFDIKEARDKFIAAGLRAK
                     AAGFTGVQLHAAHGYLINQFLSPADNQRTDRYGGSLDNRMRFLVEVYQGLRDKVGSDF
                     TIALKLNASDFKEEGFGFEDCKRVVKTMSDLGIDLIEISGGNYETPVFGSEYENGAGF
                     VTYALALADLTSVPIVSTGGFRKVAQMEEAIKDGVSMIGLARPFVLRPSLVNDHRKVG
                     DVQLTTPRLTTGLPKLDKALGPIIGVSYYEAQMKRLAKGKSVTVSQHAWPYLLQTVKA
                     HGLSALKPRRK"
     gene            4664..4912
                     /locus_tag="U1021_001995"
     CDS             4664..4912
                     /locus_tag="U1021_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712488.1"
                     /translation="MSFLEANEKIAEKVVGAHKAIEKTVVGGYKATEKAAVSGFNTIS
                     DKFIGAFFTKDNETVEEAKARMSKMDFNQPNSSKGDDK"
     gene            4968..5336
                     /locus_tag="U1021_001996"
     CDS             4968..5336
                     /locus_tag="U1021_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009854296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712489.1"
                     /translation="MKKRDFISLIAYTVSLLVLALGMCFYTLPEWEMTTLGMPLSVAG
                     LLLLALSWVLQRKLAGKGASKFDWKQIVKVIYCVFALLVFGGGFALVTTGNFVLGLVL
                     GLVGLILVIGMIPVTVGLKN"
BASE COUNT         1581 a         1094 c         1258 g         1420 t
ORIGIN      
        1 caaaagactt gccaagaagt ctagcttatg gtaagcttgt tcttgtaaat gatacaagga
       61 cagaaaggaa accagatgga tacaaagttt tcagtagccc ttcatatact gaccatgatc
      121 agtgagagta aggaaatact tagctcgcaa gccttggctg agagcgttgg caccaatgct
      181 agctacatcc gtaaggtgat tgcacttttg aaaaatgcag gcttaatcac ttcgcatcaa
      241 ggacgatcag gctaccaatt gagcaagtcc cctaaggaca ttagcttatt ggaaatctac
      301 cttgcgacgc aagaagtgga gcatattcgc ctatttcaga tacatcagaa tgccaatctc
      361 acctgtccag ttgggcagca tatagaaggc gcaatggttc ccatcttttc cagtgttgaa
      421 caagaactgg aacataaact cagtcgtcaa tccttagata atgtgattga taatctctat
      481 caatccgcac aagaaacccg aatctgacct cggtcagatt ttataaactc aaacatagac
      541 ttataagtga tacaggaaca aatcaaagaa tagaaaagag aagaacatga aagtagcaca
      601 acacacatct tataacaaaa acaacatcac ccttaacctt acagaaattg ctaaaccaca
      661 aatcaagccc caccaagtcc ttgtcaaagt gaccgcagca ggcgttaatc cattggacaa
      721 catgatctcg cgcggagatg tgaaattgat tgtcccttac aaattgccgc aaacggctgg
      781 caatgaagtg gttggcttgg tcgaagaagt aggctcaagc gtgacgacat ttgcagcagg
      841 tgatcgtgtc ttcggtcgtc ttccgcttga taatatcggt gcttttgctg agtatgtagc
      901 agttgacgct caagctcttg ctaaggttcc tgcctacttg acagatgaag aagcggcagc
      961 cgttcctctg acagctctga ccatcatgca ggcacttgac cttatggggg cacaatctgg
     1021 caagaccatc ttcatctcag gcggaactgg tggtgtcgga ggtatggcca ttccgattgc
     1081 caaagccaag ggcttgaccg ttatcacaaa tggtgatggg gcaagtgcag agcgggtgtt
     1141 gtcattgggt gcagaccgtt ttattgatta caagacagaa gattacacca aaacacttag
     1201 caatgttgac tatgtcttgg acacacttgg tggtgcagaa acagaaaaac aaatgtcaat
     1261 catgaaaaaa ggtggacagc tggtttccct tcgtgccatg ccaaatggtg aatttgccaa
     1321 aatggaaaca aatcttgttt ggcctagctg gtcgttcatt tgacaaaatg gcaaaaaaat
     1381 acggtgttca ctaccatttc attttcgtag agagcaatgg tcgccaactg caagaagtag
     1441 cagacatttt cagcaagctc gaaattaaac cgtcaatcga taccgtttat ccatttgaag
     1501 aagtcaacgt tgcacttgat aaggttgcca acggtcgttc acgcggaaaa accgtcctca
     1561 gtttcaacta aaaaaataaa atatacaggg aaaaatcatg tcatatatta caactaaaaa
     1621 ccaatacatc accgtttcaa acaataaaat tgcctaccgt gagctcagca agggcaagtc
     1681 tgacattcct ttggttatgc tggttcacct agccgcaacc ttggacaact gggatccaaa
     1741 attgctggat ttgctggctg aaaagcacca tgtgattgtt ctagaccttc ctggcgtagg
     1801 agctagtcaa ggcaaggtgg ctccgactat tccaggaatg gctgagcagg ctgcttccat
     1861 tatcaaggct ctgggtcatg agaaaatcaa tttgctgggt ctatctatgg gtggctttat
     1921 tgctcaagaa atcgttcgtc tggatagtca gctggtcaac cgtttgattt tagcaggcac
     1981 aggtcctcgt ggtggttttg aagtcgataa ggtgactgga aaaaccttcc gctatatgct
     2041 gaaggctggt ttggagcgtg tggatccaaa acgctacatt ttctacaatc atgatgaagc
     2101 aggtcgtttg gaggcagaaa aagtcttggg tcgcatgggg caaagaagtg ctgctcatgc
     2161 agacaaggac atgaatgttc caggattttt aactcagctg aaagctatca aacgctgggg
     2221 aagagagccg caagatgaca tgacctttat cacccaacca actctgatcg tcaacggtga
     2281 taaggatatg caggttccaa cagaaaattc ttataccatg catgagaaaa tcaaaaatag
     2341 ccaactgatc atctatccaa atgcaggtca cggctcgatt ttccaaaatg cagaagagtt
     2401 ttcaaaagcc ttacttgcct ttttggagga aaccaatgcc taaaaccatt ttaatcacag
     2461 gatcgacaga cgggattggc aaacacctag ccatgaaact agctagtgaa ggtcatgaag
     2521 tgatcttgca cgggtgaaat agcgaaaagc tccgtgtaac cctcagtgat attcaactaa
     2581 aaacaggaag taaaaaaatt cacgcctatc ttgcagactt ttccaagtta gcagatgtct
     2641 atcgtttcag ccaagagatt aaacgcgatt ttgagcagat tgatgtcttg ttaaacaatg
     2701 cgggtgctta ctttggagat gcccgtgtgg caacggcaga aaatatcgag atgaccttta
     2761 tgctgtctgt tcaagttccc tatatcttga cgacggagtt gctgcccttg ctggaaaaag
     2821 caggaggcag ggtcattcat acctcgtcct tcatgcacca ttttgcacaa accagaggct
     2881 tggattttgg tttagagcag agctattctg cagccatggc ttacaataat gccaagcttt
     2941 acaccatttg gctggcaata gctcaggcag aggccttaga aaagcaaggt tcatctgtga
     3001 ccgtcaatgc ctaccatcct ggcttgattg cgacaaattt gggtaatgat ggggtcaaac
     3061 gcaacctgag aagtcggatt ctcactcgtc tgatgaaacc attttccaaa gatttggatc
     3121 aggggattga aacaggttac tacttaagtc tgtcaccaga agtggctgga gtatcaggtc
     3181 gttattttgc ggagaaaaaa gtggcacggg tcagcttgaa aggctttgat gtggcaaaga
     3241 gccaagcctt actagcctat cttgataaga aaattcaagt atttaaggag agctacggtg
     3301 actaaaatct tgctagaaaa cctccaactg cccaatggtc aggtcttaga caatcgcttt
     3361 ttcaaatccg ccatgagcga aaccctggca gatagtcagg gagctccttc agatgacctg
     3421 atcgccttat atgatttttg ggccaagcag ggaatgggtg tcctagtgac aggcaatgtc
     3481 atggtagatg gtcgctaccg tggtgagccg ggcaatgtgg tccttgattc agacgctcac
     3541 ttggctcaat ttcagaaatg ggcagccatt gggaaaaaga acggtgtgcc tatctggctc
     3601 cagctcaatc accctggtaa acagatgtat cggtcgatca atcaaactcc gattgcaccc
     3661 agtgccattc cgatttctgg aggctcagct tcggcatttc gtccaccgag agaaatgacc
     3721 gtgtttgaca tcaaagaggc tagagataaa tttattgcag caggccttcg ggcaaaagca
     3781 gcaggattta caggtgtaca gttacacgct gcacatggtt acttgatcaa tcagtttctc
     3841 tcgccagcag ataatcagcg aacggaccga tatggtggca gtctggacaa tcgcatgcga
     3901 ttcttggtgg aagtctatca aggtctgcgt gacaaggtgg gatcagattt taccatcgcc
     3961 ttgaaattga atgcttctga ttttaaggaa gagggctttg gttttgaaga ttgtaagcgt
     4021 gtggtgaaaa ccatgtctga cttgggtatc gacctgattg aaatttcagg tggcaattat
     4081 gagacacctg tttttggtag tgaatatgag aatggtgctg gatttgtcac ctacgcccta
     4141 gccttagcag atttgacttc tgttcctatt gtttcaacag gcggtttccg aaaagtcgct
     4201 cagatggagg aggctatcaa ggatggtgtg tccatgattg gccttgccag accctttgtc
     4261 cttcgtccaa gtcttgtcaa tgatcatcgt aaagtcggtg atgtgcaact gacaacgcct
     4321 cgcctgacaa caggtcttcc aaaactggat aaggcccttg gtcccattat cggtgtcagt
     4381 tattacgagg cccagatgaa acgcttggcc aagggaaaat ctgtcaccgt cagtcaacat
     4441 gcctggccct atcttctcca aaccgtcaag gcacacggcc tgtcagcctt gaaaccaagg
     4501 aggaagtaga ataaactaga aaagatttga gagttcatct cagatctttt ttcgatggat
     4561 tgagatgaaa aatataaatc cgacactttt gttaaaaatt gtcgttctct aacagtcatt
     4621 atttgggtaa actaaataca tcaaatgaaa ggaggtttgc ttgatgtcat ttttagaagc
     4681 aaacgaaaaa atcgcagaga aagttgttgg tgctcataag gcaatagaaa aaacggttgt
     4741 gggaggctat aaggcaacag aaaaagcagc agtttcaggt ttcaatacaa tctcagataa
     4801 atttatcgga gcatttttta caaaggataa tgaaacagtt gaagaagcaa aggcccgcat
     4861 gtctaaaatg gactttaatc aacctaactc atctaagggt gatgacaagt aagcaagagt
     4921 agattttctt gctaaccata ctaaataata agaagaaaag gaatactatg aaaaaaagag
     4981 attttatcag tttgattgct tatacggtga gtttattggt cttagcttta gggatgtgct
     5041 tttatacctt gccagaatgg gaaatgacta ccctagggat gcccttatcg gtagcaggtc
     5101 tgctattact tgcactatct tgggttctgc agaggaagtt agcaggtaaa ggggcttcta
     5161 agtttgattg gaaacagatt gttaaagtca tctactgtgt ttttgccttg ttggtttttg
     5221 gtggaggctt cgcccttgtg acaactggga attttgttct gggtctagtc ctaggccttg
     5281 ttggccttat attagtgatt gggatgattc ctgtaactgt tggcttaaaa aattaaagaa
     5341 aacctgaggg atg
//
LOCUS       DASFQD010000136         5223 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.137, whole genome shotgun sequence.
ACCESSION   DASFQD010000136 DASFQD010000000
VERSION     DASFQD010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5223
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.137"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(179..760)
                     /locus_tag="U1021_001997"
     CDS             complement(179..760)
                     /locus_tag="U1021_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit delta"
                     /protein_id="HEM4712490.1"
                     /translation="MELNIFAGQEKSELSMIEVARAILEERGRDNEMYFNDLVNEIQN
                     YLEKSNSEIRAALPTFYSDLNVDGSFIPLGENKWGLRSWYAIDEIDEEVITLEEDDED
                     APKRKKKRVNAFMDGDDDAIDYGHDDPEDEDNYPGSASSEYDDENPDDEKDEVESYDS
                     EINEIIPDDELDEEDVDLGEDDDEYSDEEVVDE"
     gene            complement(887..4042)
                     /locus_tag="U1021_001998"
     CDS             complement(887..4042)
                     /locus_tag="U1021_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pneumococcal-type histidine triad protein"
                     /protein_id="HEM4712491.1"
                     /translation="MKKKAVVGSVAALVLGMSLCSYQLGRFQAMEEQKNRVSYIEDSQ
                     SVQTTVAEQLTPDQVSAKENIDAEQIVVKITDQGYVTSHGDHFHYYNGKVPFDAIFSE
                     ELVMKDPNYVLQDSHIINEVQDGYVIKVDGKYYLYLKDSSKHKNVRSKEEVERQKGIS
                     SADSKNQVAGNSKDGRYRTDDGYVFNPTDVIEDTGDGFIVPHGDHFHFIPKKDLSAAE
                     LKAAQDYWNQKGSVSSASGSQYGDRNNRAQQTTISAGQGQDLASLLAQLDATPLSQRH
                     VEADGLVFDPRTITKKTAAGVIVPHGDHYHFIPYSQMSPLEEKISRMIGVNGAGVSSG
                     AQASHSQHTPTQLNRPVTPIGTVTTQPVSPTQPVLPTQPKQSTGKVVSYMGRQIPAYG
                     KGLDGRAYFTSDGYIFSKSSITSVDDQGLIASHGDHFHYVGFGELEDFEIKQVEEWVN
                     EKAGKQVPPKTSEQVGNDAKPITPSQGNDSRPVKPIQEENRPAFEYKQVTAKRKLAGK
                     VVYEMEVGGKTYTYGRDELDLMKISFAELTLAEKDKQYIFDIAPLAEGDLTPAMLVGM
                     DQIPMKGANATYDTGQSFIIPHIDHIHVLPYTWLSKEQIATIRYIMQHPEIRPSAWTT
                     SGHGDGEATDLVPPILNATPKANRLGLKNWQIIHTAEEVMDARAKGKFATNDGYIFSA
                     EDVLDPASFVFSQAFSLPRATGGSLRSISKKDLSKEELEAVQTLLDKRDAEELAKNVT
                     PIEKRAGLKNWQIVHSAEELAEAKAAGKYTTKDGYIFDPADLLDPKVKIGTDNYRIPR
                     VITDGYRRINKSDLNYLSELIPAEAMVAQREKSNSSSPSTPALTETGASAGETTTPEQ
                     PQVPKETAEEIYNRVEAKKVVPFEALTYNAGYATEVRNGTLVIPHQDHYHYVSFKWFD
                     QGSARSPEGYSLEDFLATVKYYMTNPQERPVSDDGWGVFTPNTPSESTEETETEESDE
                     EIISEETEEIDEFTEELKRRAEEFGMDFKTFEQSLVTLSDRYKVSFEAFEYDATSKVV
                     RLVDKDGVKRIISLPSLEEQV"
     gene            complement(4076..4996)
                     /locus_tag="U1021_001999"
     CDS             complement(4076..4996)
                     /locus_tag="U1021_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000744528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEM4712492.1"
                     /translation="MFKKIVGTCLLAVFGFVLAACSAQKEASQVQPGMKIVTSFYPIY
                     SLVKEVSGNKNDVRMIGSRQGIHSYEPSAADIKAIYDADVFIYHSRILESWAGRLEPN
                     LQGSSVKVLEASTNLPLTKVPGLEDMEAGQGIDEASLYDPHTWLDPVLVGQEAVAIGE
                     LLAESDPKNADYYRQNAATLEEKAQKLADKYSPIFLKATSKTFVTQHTAFSYTAQRFG
                     LKQLGIAGVSEEEPSPRQLAEIKEFVDTYNVQTIFTEKGASDKLAKALASSTGVDLKV
                     LDPLEADPENNLTYLENLEQVLETLAQELK"
BASE COUNT         1347 a         1163 c          977 g         1736 t
ORIGIN      
        1 acgattcagg ctaataggaa gcaatttgtg ggggatactc cctgttaact tgaagaaaaa
       61 acaaaaatag ctccctatcg ctagggagct ccgacctcaa aagaggtgcc caataatatc
      121 ttatcgtaat tcagtagtct tgtcaaatta tttttaagaa tctaggggga tataattctt
      181 attcatcgac gacctcttca tctgaatact cgtcatcatc ttcacctaaa tcaacatcct
      241 cttcgtccaa ttcgtcatct ggaataattt cgttgatttc tgaatcatag gactcaactt
      301 catctttttc gtcatctgga ttttcatcat cgtattctga tgatgcacta cccggatagt
      361 tgtcctcatc ttctggatcg tcatgtccat agtcaatcgc atcatcatca ccgtccatga
      421 aggcattgac acgtttcttc ttgcgttttg gtgcgtcttc atcatcttct tcaagagtga
      481 ttacttcttc atcgatctca tcgattgcgt accaagaacg taatccccat ttgttttcgc
      541 caagtggaat gaagcttcca tccacattca aatcagaata gaaggttggg agggctgcgc
      601 gaatctcgct gtttgatttt tcaaggtagt tttgaatttc attgaccaag tcattgaaat
      661 acatttcgtt gtcacgtcca cgttcttcca aaatagcacg ggctacttca atcatggaaa
      721 gttcgctttt ttcttgtcct gcaaatatgt taagttccaa ggctgttctc cttttttgtc
      781 tttcctttct attttacgct aaaaaaggca aatagtcaaa gataatcttt atcgtttttc
      841 tgtaaaaaaa tacctgcaga gctcagcgct acaggtattt tgtttactat acttgttctt
      901 ctaaacttgg aagggaaatg atccgtttga ccccatcctt atctacaagt cgaacaactt
      961 tgcttgttgc atcatattcg aaagcttcaa aagaaacttt gtaacggtct gagagtgtga
     1021 ccagactttg ttcaaaggtt ttgaagtcca tgccaaactc ttctgctctt cgttttaatt
     1081 cttctgtaaa ctcgtcaatt tcctcggttt cttcagaaat aatttcttca tcactttctt
     1141 ccgtctctgt ttcttctgtt gattcagatg gtgtatttgg tgtaaatact ccccagccat
     1201 cgtctgaaac tgggcgttct tgtggattag tcatgtagta tttaaccgtt gctaggaaat
     1261 cttctaaact gtacccttca ggacttcttg cactaccttg gtcaaaccat ttaaaggata
     1321 catagtgata gtgatcttga tgcggaatta ccagagtccc gttgcgtact tcggtcgcat
     1381 agccagcatt ataggtcagt gcttcgaaag gaacgacttt cttcgcttcc actcggttat
     1441 aaatttcctc tgctgtttct ttgggaactt gtggctgttc tggcgttgtt gtctcgcctg
     1501 cacttgctcc tgtttcagtt agtgcaggtg ttgacggtga actagaatta gatttctcac
     1561 gttgagccac catagcctca gctgggatca gctcgcttaa gtaattcaaa tcactcttgt
     1621 taatccgacg gtaaccatct gtaatcacac gtgggatgcg atagttatcc gttcctattt
     1681 tcactttggg atctaatagg tctgctgggt caaaaatata gccatctttt gttgtatatt
     1741 ttcctgctgc cttagcttct gccaattctt ctgctgagtg aacaatttgc caatttttca
     1801 aacctgcacg tttctcaatt ggtgtgacat ttttcgccaa ttcttcagca tctcgtttat
     1861 caagaagagt ttgtacagct tccaattctt ctttagataa atctttcttg gaaattgaac
     1921 gcagagaacc acctgtcgct cttggtagac tgaacgcttg actaaagaca aaacttgctg
     1981 gatctagtac atcttctgca gagaagatat agccatcatt tgtcgcaaat ttcccttttg
     2041 cacgtgcatc catgacttct tctgctgtgt gaatgatttg ccaatttttc aagcctaagc
     2101 ggtttgcttt aggtgttgca tttagaattg gaggaacaag atccgttgct tctccatcac
     2161 catgtccact tgtagtccaa gcagatggac gaatttcagg atgttgcatg atatagcgga
     2221 tcgttgcaat ttgttcctta ctcaaccatg tgtaaggtag gacgtggatg tgatcaatgt
     2281 gtggaataat aaaggattgt ccagtatcat aggttgcatt cgctcccttc atcggaattt
     2341 gatccatacc gaccaacatg gctggcgtaa gatctccttc tgcaagcggt gcaatatcaa
     2401 agatatactg cttatctttt tctgccaagg tcaactcagc aaaagagatc ttcatcaaat
     2461 ctagttcgtc acgaccatat gtataagttt ttccacctac ttccatttca taaacaactt
     2521 ttccagccaa tttacgttta gccgttactt gtttgtattc aaatgcaggg cgattttctt
     2581 cttgaattgg ttttacaggt cttgaatcat tcccttgact tggtgttatg ggtttagcat
     2641 cgtttcctac ttgttcagat gttttcggtg gcacttgttt gcccgccttc tcattaaccc
     2701 attcctctac ttgcttgatt tcaaaatctt cgagttcgcc aaaaccaaca taatggaaat
     2761 gatctccatg actagctatc agcccttgat catcaactga ggtaatagag gatttgctaa
     2821 agatgtatcc atcacttgta aaatatgccc taccatctaa accttttccg taagcaggaa
     2881 tttgacgtcc catataggaa accactttcc ctgttgactg cttcggttgt gttggtaata
     2941 ctggttgtgt aggcgatacc ggttgtgttg taaccgtgcc gattggtgtt actggacgat
     3001 ttagttgtgt tggtgtatgt tgggagtgac ttgcttgtgc gccagaagaa acacctgctc
     3061 catttacacc aatcattcga gaaatcttct cttctagagg agacatctgg ctgtatggaa
     3121 taaagtggta atgatcgccg tgtggaacga tgacacctgc tgcggttttc ttcgtaatcg
     3181 ttcttgggtc aaataccaat ccatccgctt ctacatggcg ttgagatagg ggtgttgcat
     3241 ccaattgagc caataaacta gccaaatcct gaccttgccc cgcactaatt gttgtctgtt
     3301 gagctctatt atttctatcg ccatattgac taccactagc cgagctcaca cttccttttt
     3361 gattccagta atcttgagca gccttcaatt cggcagctga taaatctttt ttaggaataa
     3421 agtggaaatg gtcgccgtgt ggaacgataa aaccatctcc cgtgtcttca ataacatctg
     3481 tcggattaaa gacatagcca tcgtctgttc tgtagcggcc atctttacta tttcctgcca
     3541 cctgattctt actgtcagca gaagagattc ctttttgccg ctccacttct tctttgctac
     3601 gaacattttt atgtttgcta gagtctttta gatagagata gtatttccca tcaactttta
     3661 tgacgtagcc atcctggact tcattgatga tgtgactgtc ttgtaagaca tagtttgggt
     3721 ccttcatgac caactcttca ctaaaaatcg catcaaaggg gactttacca ttatagtagt
     3781 ggaaatggtc accatgtgat gtcacatagc cttgatcagt aattttaacg actatctgct
     3841 cagcgtcaat attttccttg gcagaaactt gatcaggtgt taattgttca gcaacggtag
     3901 tttgtacact ttgactatct tcaatatagg acacacgatt tttttgctct tccatcgctt
     3961 ggaaacgtcc aagctgatag ctacagagac tcatccctaa aacaagggcg gctacggagc
     4021 caacaactgc ttttttcttc attttttctc ctttcggtcg atagaattcg gccttttact
     4081 ttaactcttg agctaatgtt tctaagactt gctctagatt ttctagatag gttaaattat
     4141 tttctggatc tgcttcaaga ggatccaaca cttttaaatc tacacctgtc gaactcgcca
     4201 atgccttggc aagcttatcc gaggcacctt tttctgtaaa aattgtttgc acattgtagg
     4261 tgtcaacaaa ttctttaatt tccgccaact gtctagggct tggctcttcc tctgaaactc
     4321 ctgcgatccc taactgcttc aacccgaagc gttgtgcagt gtaagagaag gctgtgtgtt
     4381 gagtgacaaa tgtttttgat gtggctttta aaaagattgg gctatactta tctgccaact
     4441 tttgcgcctt ttcctctaat gttgcggcat tttgacgata ataatccgca ttcttaggat
     4501 cactttctgc taaaagttca ccaatcgcaa cagcttcctg accaaccaaa acaggatcca
     4561 gccatgtgtg agggtcatat aaactagctt catcaatccc ttgaccagct tccatgtctt
     4621 ctaaccctgg aacctttgtc agcggtaaat ttgtcgaagc ctccaaaacc ttgacagatg
     4681 aaccttgcaa attaggttcc aaacgtcctg cccaggattc caaaattcgc gaatgataga
     4741 taaaaacatc tgcatcatat atagccttta tgtccgcagc cgatggttca taagagtgta
     4801 tgccctgtct tgagccaatc attcgaacat catttttatt tcctgacact tccttaacca
     4861 gtgaataaat cgggtaaaat gaggtgacta ttttcattcc tggctgcact tgactcgctt
     4921 ccttctgagc cgagcaagcc gctaaaacaa aaccgaatac ggccaaaaga caggtcccta
     4981 ctattttctt aaacataatt acctccttct ttaaccagtt aattatataa caaaaacatt
     5041 aactggtcaa gcattttttt gagaaagtca tagctatccg cgaaagctaa attctcaaag
     5101 taagttctag tctgtcttaa aaactggaaa ttagactgag acaaagaaat aaggtagaac
     5161 ttactttggg acaagttggc aatcgacaat gaaaaacaaa cacttaactc tctctgatcg
     5221 caa
//
LOCUS       DASFQD010000137         5215 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.138, whole genome shotgun sequence.
ACCESSION   DASFQD010000137 DASFQD010000000
VERSION     DASFQD010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5215)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5215)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5215
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.138"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..1283)
                     /locus_tag="U1021_002000"
     CDS             complement(<1..1283)
                     /locus_tag="U1021_002000"
                     /EC_number="1.1.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase,
                     degradative"
                     /protein_id="HEM4712493.1"
                     /translation="MSTFSGFYKKSRQERIDILRQNHSLSEDSLDVLYKDENLPEAIA
                     GKMAENHLGTFSLPFSVLPELLVDGQTHSVPMVTEEPSVVAAASFGAKIIAKSGGFTT
                     TIHNRIMIGQVALYDISDHSRATQAILDQKESILETANQAHPSIVKRGGGARELTVES
                     KDEFLIVYLQVDVQEAMGANILNNMLEAVKEDLEELSKGQALMGILSNYATESLITAQ
                     CHIAISSLATSSAIAQETAQKIALASKLAQVDPYRAATHNKGIFNGIDAVVIATGNDW
                     RAVEAGAHAYASRDGQYKGLSTWSIDGEHLVGSITLPLPIASVGGSIGLNPKVAVAFD
                     LLQQPKARQLASIIASVGLCQNFAALRALVTSGIQAGHMKLHAKSLALLAGAEEHEVD
                     QLAQLLRKEKHSNLETAQNLLAKMREHWEWERTRP"
     gene            complement(1345..2499)
                     /locus_tag="U1021_002001"
     CDS             complement(1345..2499)
                     /locus_tag="U1021_002001"
                     /EC_number="2.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase"
                     /protein_id="HEM4712494.1"
                     /translation="MNIGIDKIGFAAPDYVLDLADLAQARNVDPNKFKIGLLQSEMAV
                     APVTQDIISLGAKVAEAILTEEDKQTIDMVIVGTESSVDQSKAAAVTIHGLLGIQPFA
                     RSIEMKEACYGATAGLSLAKSHIAQFPESKVLVIASDIAKYGVASGGEPTQGAGAVAM
                     LVTANPRILVLNNDNVCQTRDIYDFWRPNYDKYPRVDGKFSTEQYTDCLTTTFDYYQQ
                     KTGKTLNDFAAMCLHIPFSKQGLKGLQAIAQEEETLSRLTERFQEAIVYNKVVGNIYT
                     GSIFLSLLSLLENSRALETEDQILFYSYGSGAVCEIFSGQLVEDYRDHLQENRLEQLN
                     QRTKLSVKEYEQVFFEEITLDETGSSLNLPEDQSPFALIKVDNHKRIYRK"
     gene            complement(2528..3712)
                     /locus_tag="U1021_002002"
     CDS             complement(2528..3712)
                     /locus_tag="U1021_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEM4712495.1"
                     /translation="MKKVAIVSAYRSAIGSFGGSLKDIEIADLGAQVLETALANKNIP
                     ADSVDEVIFGNVLSAGQGQNIARQIAIRAGIPQTASAYAVNKVCGSGLKSVLLAAQSI
                     MLGDNDVVVAGGIEIMSQAPYLSKTSRFGSKFGHITLEDSMLTDGLTDAFNDYHMGIT
                     AENVAEHYQVSRAEQDAFTYSSQEKAAKAIAEGRFVDEIVPIRLKNRKGETIFATDEY
                     PRLTPIEKLATLRPSFKKDGTVTAANASGINDGCAVLVLMSDEKASELNIQPLAYIEA
                     YATSGLDPAYMGLGPITASQKALQKLNKTVEDIDLFELNEAFAAQSIPVVKQLGIDPA
                     KVNVNGGAIALGHPIGASGSRILVTLIHELIKQEKELGLCSLCIGGGQGISLIVSNAQ
                     TS"
     gene            3938..4630
                     /locus_tag="U1021_002003"
     CDS             3938..4630
                     /locus_tag="U1021_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate mutase"
                     /protein_id="HEM4712496.1"
                     /translation="MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIK
                     EAGIEFDLAFTSVLKRAIKTTNLALEAADQLWVPVEKSWRLNERHYGGLTGLNKAEAA
                     AEFGDEQVHIWRRSYDTLPPEMAKDHEHSAHTDRRYAHLDDSVIPDAENLKVTLERAL
                     PFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKQLSDDEIMDVEIPNFPPLVFELDE
                     NLNIVKEYYLEA"
     gene            4736..5119
                     /locus_tag="U1021_002004"
     CDS             4736..5119
                     /locus_tag="U1021_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM4712497.1"
                     /translation="MASKKMLHACLRVEDLEASQKFYEEAFGFKETRRKDYPEHKFTL
                     VYLALEEDDFEIELTYNYEHGPYIVGDGFSHLALSSDDLEGDNAKHKELGYPTTDIKG
                     LPGSPGRYYFVTDPDGYRVEVIRAD"
BASE COUNT         1431 a         1064 c         1206 g         1514 t
ORIGIN      
        1 cttggtcgag ttctttccca ctcccaatgt tctctcattt ttgctaataa gttttgagca
       61 gtttctaggt tgctgtgctt ttctttccgc aggagttggg ctagttgatc tacttcatgc
      121 tcctcggcgc cagcaagtag cgctagggat tttgcgtgga gcttcatgtg accagcctga
      181 atccctgaag taacaagagc acgcagggca gcaaagttct gacagagacc gacagaagcg
      241 atgatagaag ctaattggcg tgcctttggt tgttggagaa ggtcaaaagc aactgctacc
      301 tttggattga gcccgataga gccaccgacg gaggcaattg gaagaggtag agtgatggag
      361 ccgaccaagt gctcgccatc aatagaccaa gtagaaagcc ccttgtattg tccatcacgg
      421 ctggcataag catgggcccc ggcttcgact gcccgccagt catttcctgt agcgataacg
      481 acagcatcta taccattaaa aatccctttg ttatgtgtcg cagcacgata agggtccact
      541 tgcgccagtt tgcttgccag ggctattttt tgagcagttt cttgagcaat ggcagagctg
      601 gtagccagac tagagatggc aatatggcat tgggcggtga tcagtgactc cgttgcatag
      661 ttggagagga ttcccatcaa agcctgcccc ttgctgagct cttctaagtc ctccttaaca
      721 gcttctaaca tgttattgag gatattggct cccatggctt cttgtacatc aacctgaaga
      781 tagacaatca aaaactcatc cttactctca acagtcaatt ctcttgcacc gccccctcgt
      841 ttgacaatgg aagggtgcgc ttgattggca gtttctaaaa tactctcctt ctggtcaaga
      901 atcgcctggg tcgctctgct atggtccgaa atatcgtaga gagcaacttg tccaatcatg
      961 atacggttgt gaatagtcgt tgtaaaaccg ccagatttag cgatgatttt ggctccgaaa
     1021 gacgcagctg caaccacaga aggttcttca gtgaccatgg gtacagaatg agtctgtcca
     1081 tccactagaa gttctgggag tacagaaaaa ggtaaggaga atgttcctag atgattttct
     1141 gccatctttc ccgcaattgc ttctggcagg ttctcgtctt tgtatagaac gtctaagcta
     1201 tcttcggata gggaatgatt ctgacggaga atatcaatgc gctcttggcg tgatttttta
     1261 taaaatccgg aaaaagttga cataggttcc tctttctata ggaaagcgcc ccttggtgag
     1321 agccaaaggg cgccgttttg gcttttattt acgatagata cgtttgtgat tgtccacttt
     1381 gataagggca aagggacttt ggtcttctgg taggttaagg gatgaaccgg tttcatcaag
     1441 ggtaatttct tcaaagaaga cttgttcata ttccttaacg ctgagttttg tacgctgatt
     1501 gagttgttct aaacgatttt cttgtaagtg gtcgcgataa tcttcaacga gttgaccgct
     1561 gaaaatttca cagacagcgc cgctaccata gctataaaag aggatttgat cctctgtctc
     1621 taacgctctg ctattttcca aaagggaaag aagagagagg aagatagagc cagtgtagat
     1681 gttgccgacg actttattat agacgatagc ttcctggaaa cgttctgtca agcgactaag
     1741 agtttcttcc tcctgagcaa tagcttgcag tcctttaagg ccttgtttgg agaaagggat
     1801 atgcaagcac atggcagcaa aatcgttgag ggttttgcct gttttttgtt gatagtagtc
     1861 gaaagttgtc gtcaagcaat cggtgtactg ttcagttgaa aatttaccat caacacgtgg
     1921 atatttgtcg tagttgggac gccagaagtc gtagatgtca cgtgtctggc agacattatc
     1981 attattgagg accaaaattc gtgggtttgc ggttaccaac atggcaactg ccccagcacc
     2041 ttgggtaggt tcaccgccag aagcgactcc atattttgca atatcactag caatgactag
     2101 gacttttgat tctgggaatt gagcgatatg gcttttggca agacttagtc cagccgttgc
     2161 accgtaacaa gcctccttca tctcgatgga gcgagcgaag ggctgaatac cgagtaatcc
     2221 atgaatagta acggcggcag ccttactttg atctacgcta gattctgtac cgacaataac
     2281 catgtcaatg gtttgtttat cttcttctgt cagaatggct tcggcaacct ttgccccaag
     2341 actgataata tcttgagtga caggagctac agccatttca gactgaagaa gaccaatctt
     2401 aaatttattt gggtccacat tgcgggcttg ggctaaatca gccaaatcta aaacataatc
     2461 gggtgccgca aatccgattt tatcaatacc gatgttcata atatatcctt tgtgtacaaa
     2521 tgataggtta acttgtttgc gcattggaaa cgattaggga gatgccttga ccgcctccga
     2581 tacaaagtga gcaaagacca agctcttttt cttgcttgat taattcgtga atcagagtga
     2641 ctaggattcg actaccacta gctccgattg gatgtccaag ggctatagca ccaccattga
     2701 cattgacttt tgcaggatca atgccgagtt gtttgacaac tggaattgat tgggctgcga
     2761 atgcctcgtt gagttcgaat agatcgatat cctcgactgt tttattcagt ttttgtagcg
     2821 ctttttggct agcagtaata ggacctaacc ccatataggc aggatctaaa ccgcttgttg
     2881 cataggcctc aatataggcg agtggctgga tatttagctc actggctttt tcatcagaca
     2941 tgagtaccaa gacagcacag ccgtcgttga tgccagaagc attggctgcg gtgacggttc
     3001 catccttttt aaaagatggc cgaagtgttg ccaatttttc aattggcgtc agacgagggt
     3061 actcatctgt ggcaaaaata gtttcgcctt tccgattttt taatctaata ggaacaattt
     3121 cgtcaacaaa tcttccctca gcaatagctt tcgcagcctt ctcttggcta ctgtatgtaa
     3181 aagcatcttg ttctgcgcga ctgacttgat agtgttcagc aacattttct gcagtaatac
     3241 ccatgtgata gtcgttgaag gcatctgtta gaccgtctgt cagcatagaa tcttctagag
     3301 taatatgacc aaatttacta ccaaaccggc tagttttgga tagataaggt gcctggctca
     3361 tgatttcaat gcccccagcc acaactacat cattgtcacc tagcatgatt gactgggcag
     3421 ccaggaggac tgatttgaga ccggaaccac agactttatt gactgcatag gcagaggctg
     3481 tctgaggaat gcctgcacga atagcaattt gacgtgcaat attttgtcct tgtcctgctg
     3541 aaagaacatt tccgaagata acttcatcaa cgctgtctgc agggatgttt ttattagcta
     3601 aggctgtttc gaggacttgc gcccctaaat cagcgatttc aatatctttc agactacctc
     3661 cgaaactgcc gatggcagaa cgataggcag acacgatagc tacttttttc atgataactc
     3721 ctatagtggt atcgttttga actgtcgtgt tcagccttac tattatacca ttattttgta
     3781 ttttttctaa gaagaaagat aggtctagag actgaattta catgaaagag taatgaaagc
     3841 gtacacagat tgtggaaagg ctggcatttt tttacctttt cgtgtaaaat agagaagtat
     3901 aagaggggaa cctcaaaatt taaaggagaa tccataaatg gtaaaattgg tttttgctcg
     3961 ccatggtgag tctgaatgga acaaagctaa ccttttcact ggttgggctg atgttgattt
     4021 gtctgaaaaa ggtacacaac aagcaatcga tgcaggtaaa ttgatcaaag aagcaggtat
     4081 cgaatttgat cttgctttca catctgtatt gaaacgtgct atcaagacta caaacttggc
     4141 tcttgaagct gcagatcaat tgtgggtacc agttgaaaaa tcatggcgtt tgaacgaacg
     4201 tcactacggt ggtttgactg gcttgaacaa agctgaagca gctgctgaat ttggtgatga
     4261 gcaagttcac atctggcgtc gttcttatga tactttgcca ccagaaatgg ctaaagatca
     4321 tgagcattca gcacacactg accgtcgcta tgcacacctt gatgattccg ttattccaga
     4381 tgcagaaaac ttgaaagtaa cgcttgagcg tgcccttcca ttctgggaag ataaaattgc
     4441 tccagcattg aaagacggta aaaacgtatt cgtaggtgca cacggtaact caatccgtgc
     4501 ccttgtaaaa cacatcaaac aattgtctga tgatgaaatc atggatgtgg aaattccaaa
     4561 cttcccacca cttgtattcg aattggatga aaacttgaac attgtgaaag agtactactt
     4621 ggaagcataa ttcatttaag gcctgagttc gctcaggctt ttttagtttt gaatatcgga
     4681 tttttcatag agagtatggt atactggtgg tattaaatgg taggaggaat ttattatggc
     4741 aagtaaaaaa atgctacatg catgtttgcg tgttgaggac ttagaagcat ctcaaaaatt
     4801 ttatgaagaa gcatttggat ttaaggaaac ccgtcgcaag gactatccag agcacaagtt
     4861 taccttggtt tacttagcac ttgaagagga tgactttgag attgaattga cctacaatta
     4921 tgagcatggt ccctatatcg taggcgacgg cttctcgcat ctagctcttt cttcagatga
     4981 tttagaaggg gataatgcga aacataagga gctgggctat ccaacgacag acatcaaggg
     5041 cttgccagga agtccaggtc gttattattt tgtgacagat ccagatggct accgtgtgga
     5101 agtcattcgt gcagattaat ttagaaaaga ttgcctaggc agtctttttc ttttcaaaaa
     5161 aaaatcagaa aatggcagaa gggagggatt aggaagcaaa tcaattattt atact
//
LOCUS       DASFQD010000138         5136 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.140, whole genome shotgun sequence.
ACCESSION   DASFQD010000138 DASFQD010000000
VERSION     DASFQD010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5136)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5136)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5136
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.140"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(3..1817)
                     /gene="glmS"
                     /locus_tag="U1021_002005"
     CDS             complement(3..1817)
                     /gene="glmS"
                     /locus_tag="U1021_002005"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019804802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEM4712498.1"
                     /translation="MCGIVGVVGNTNATDILIQGLEKLEYRGYDSAGIFVTGGEQAHL
                     VKAVGRIAELSAKVGDKTEGTTGIGHTRWATHGKPTEDNAHPHTSQTGRFVLVHNGVI
                     ENYLEMKNDYLAGHDFKGQTDTEIAVHLIGKFVEEDGLSVLEAFKKALHIIQGSYAFA
                     LIDSENPDVIYVAKNKSPLLIGLGDGYNMVCSDAMAMIRETSEYMEIHDKELVIVTKD
                     SVQVTDYEGNAIERGSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRKLISTYADADG
                     KMIVDPAIVKAVQEADRIYILAAGTSYNAGFASKNMIEALTDTPVELGVASEWAYHLP
                     ILSKKPLFILLTQSGETADSRQVLVRANEMGIPSLTITNVPGSTLSREATYTMLLHAG
                     PEIAVASTKAYTAQVAALAFLSKAVGEANGKQEAIDFDMVHELSIVAQSIEATLSEKD
                     LIADKVEKLLATTRNAFYIGRGTDFYVTLEAALKLKEISYIQTEGFAAGELKHGTISL
                     IEDGTPVIALLSANEKVAAHTRGNIAEVVSRGANTLVVVEEGLDREGDDIVVNKVHPF
                     LSSISMVIPTQLIAYYASFQRGLDVDKPRNLAKAVTVE"
     gene            complement(2010..2552)
                     /gene="lepB"
                     /locus_tag="U1021_002006"
     CDS             complement(2010..2552)
                     /gene="lepB"
                     /locus_tag="U1021_002006"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEM4712499.1"
                     /translation="MVKRDLVKQISLVILLILGLIGLRVWFFEPVTITSQMANDYIKE
                     GDFIVTVRNAKLTHGDFILYKHDGKEYVSRVIAVTDETVTYMDDVLYRDNVIVTESYL
                     KAPHTQESYTEDFTIATLTNGQFESIPKDYILVLNDKRTNHQDSRSFGLTAEKDIIGR
                     LTFRLSPLKEFGFIKTGLVQ"
     gene            complement(2591..3211)
                     /locus_tag="U1021_002007"
     CDS             complement(2591..3211)
                     /locus_tag="U1021_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HEM4712500.1"
                     /translation="MSDIMYPEVLTVGSGAIKVATVGDSLTYGYGLENREKDAYPCIL
                     AEKLGHLYQVSNFGLSGRSLQSTSDYPYFNEKNAQLSLESEADIVIIMIGSNDSRGPY
                     WNKERFISEYREMAERYLSLPSQPDLYLVIPPFVPTSRFGLNNQIIEDELQDIIAAIG
                     QELDVPVINLYLLTKGHLEYYSDGLHLTPLGNQVIAEEIYHHLING"
     gene            3297..4406
                     /locus_tag="U1021_002008"
     CDS             3297..4406
                     /locus_tag="U1021_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEM4712501.1"
                     /translation="MKKNVIIIGGGIVGSTAAFYLSQDETVNLTLIDHGVGTATRAAA
                     GIICPWMAQKKNKDWYKLTSEGAVFYRKLVADLESAGAKDIPFKQTGTIGLKSKPELL
                     EKIQKIAEDRRVDTPTIGQITSLQGEEISDYLPPLKPDFYGIHLEGGGRIDGGRLIDI
                     LQEEVLKNGGALLQGQAKLLDAHTVQLDGQELTADHIILATGAWLPHILEPLGYRVNV
                     RPQKGQLLELDTKHDTNNWPVCMPYGQIDILPFEKGKIIVGATHEDDMGYDLTLDPEK
                     IQAMQVKAAEFMPDLANYSVARTRIGTRAYTSNYAPFYGNIEDMKNVWVASGLGSSGL
                     TNGPFIGWQIAQEILGKETSFDRSAYSPTNYIKKQ"
     gene            complement(4445..>5136)
                     /locus_tag="U1021_002009"
     CDS             complement(4445..>5136)
                     /locus_tag="U1021_002009"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712502.1"
                     /translation="SVTQEVPVGHLFLHGSSVTQEVPVGHLFLHGSSVSHELPVGHLS
                     LHGSSVTHELPVGALSSSEDLVADKLEHVTAEKTEIEQAGRGIFNQIISLSNEYSGKI
                     SIRPTLNMRENGYKNTNISSELIVEQETVGQANSTGLPRAFNQSSEPDFQFEKDSEKE
                     QVTPSTSISSNNQNLGKGSEKAVAKGDEADSQEKETADQTPYLIAFSLLGIGAVGYWL
                     LFHKMIKVDKS"
BASE COUNT         1487 a         1192 c          998 g         1459 t
ORIGIN      
        1 tattattcaa ccgtaactgc ttttgcaagg ttacgcggtt tatcgacatc cagaccacgt
       61 tggaaggatg catagtaggc aatcaactga gttgggatca ccatagagat gcttgacaag
      121 aatggatgca ccttgttaac aacgatatca tcaccttcac ggtccaagcc ttcttccacc
      181 acgaccaaag tgttcgcacc acgggaaact acctctgcga tattaccacg cgtgtgagcg
      241 gcaacttttt cattggcaga aagcagagca ataactggag taccgtcttc aatcaaggag
      301 atggttccgt gtttcaattc tccagccgca aagccttctg tttgaatgta agaaatttct
      361 tttaacttga gagctgcttc aagagttaca taaaaatctg taccacgacc gatatagaaa
      421 gcattgcgag tggttgccag gagtttctca accttgtctg caatcaagtc tttctcagaa
      481 agggttgctt cgatagactg ggcaacgatt gacaactcat gtaccatgtc aaagtcgatt
      541 gcctcctgct tgccattggc ttcaccgaca gcttttgaca agaaggcaag ggcagccacc
      601 tgagcagtat aggccttggt tgaggctacc gcaatttcag gacctgcatg gagtaacatg
      661 gtgtaagtcg cttcgcgaga aagtgttgag ccaggtacgt ttgtaatagt caaacttgga
      721 atgcccattt cattggcacg caccaagacc tgacggctat ctgctgtttc acctgactgg
      781 gtcaagagga taaagagtgg cttcttgcta agaattggca agtggtaggc ccattcagac
      841 gccacaccca actccacagg ggtatctgtc aaggcttcaa tcatgttttt ggaagcaaaa
      901 cctgcattgt aagatgttcc cgccgccaag atatagatac ggtctgcttc ttgcacagct
      961 ttcacgattg cagggtcaac tatcatctta ccgtccgcat ctgcataggt tgaaatcaac
     1021 ttacgcataa cagtcggctg ctcgtcaatt tcctttagca tgtagaacgg ataagtcccc
     1081 ttaccgatat cagacaagtc caattcagcc gtgtagctgc cacgctcaat ggcattgcct
     1141 tcgtagtcag tcacttgaac actgtctttg gtcacaatta ccaattcttt gtcatggatt
     1201 tccatatatt cactggtttc acgaatcatc gccatggcat ctgagcagac catgttgtat
     1261 ccatcaccca aaccaatcaa aagcggagat ttgtttttag caacgtagat gacatcagga
     1321 ttttcagaat cgatcaaggc aaaggcataa gaaccttgga tgatatgaag agcttttttg
     1381 aaggcttcca atacagacaa gccatcttct tctacgaatt tcccaatcaa atgaacagcg
     1441 atttctgtat ctgtctgacc cttgaaatca tgaccagcca agtagtcgtt tttcatttcg
     1501 aggtagtttt cgatcacacc gttgtgaaca agtacaaaac gacctgtttg tgaggtatgt
     1561 gggtgggcat tgtcctcagt tggtttaccg tgagttgccc agcgagtatg accgattcct
     1621 gttgttccct cagtcttatc gcctacctta gcagacaact ctgcaatgcg acctactgct
     1681 tttaccaagt gagcctgctc cccacccgtt acgaaaatac ctgctgaatc ataaccacgg
     1741 tattctaact tttcaagacc ttgaatcaaa atatcagttg cgtttgtatt acctacaaca
     1801 ccaacaattc cacacatatt ctatcacctt caattcgaac gaattgaact ttcttaaaat
     1861 tatcttaaat tggtatagtc tgattttttt gtttaaaaat cagtaaaatc agtatataac
     1921 aactttttgt acttgtcaac attttaattg gtatagtcag attgttggat ttcaaatcca
     1981 aacagttcaa caattaataa aagctgattc tactgaacca gccctgtttt tataaatcca
     2041 aattctttta agggacttaa gcggaatgtt agtctcccaa taatatcttt ttctgcagtc
     2101 aatccaaaac tacgactgtc ctgatgattt gtcctcttat cattcaaaac taaaatataa
     2161 tctttaggaa tggactcgaa ttgtccattc gtcaaggtag caattgtaaa atcttccgta
     2221 taactttctt gtgtatgcgg tgcttttaga taggattctg ttacaatcac attatctcta
     2281 tacaagacat catccatata ggttacagtt tcatcagtaa ctgcaatgac tcgactgaca
     2341 tactcttttc catcatgttt ataaagtatg aaatcaccat gtgtcagttt ggcattgcga
     2401 acggtaacaa taaagtcacc ttctttgata tagtcatttg ccatctggga tgtgatggtt
     2461 actggttcaa agaaccatac tctcaaacca atcaatccta aaatcaacag aatgaccaaa
     2521 ctgatctgct ttactaaatc tctctttacc ataatctctc caatcaatac tattatacca
     2581 taaactcagg ctatccattg ataagatgat ggtatatttc ctcagctatc acttgatttc
     2641 caagaggtgt caagtgcaag ccatcgctat aatattccaa atgccccttg gttaagagat
     2701 aaagattgat gactggcaca tccaattcct gaccaattgc tgcaataatg tcttgtaatt
     2761 catcctcgat aatctgatta ttcagtccaa aacggctggt tggcacgaaa ggtggaataa
     2821 ccaagtatag atctggttga ctaggtaaac tcaagtaccg ctctgccatt tccctatatt
     2881 cgctaataaa tcgctcctta ttccagtatg gaccacggct gtcattgcta ccaatcatga
     2941 taatgacaat gtccgcttcg ctctcaaggg acaactgggc atttttctca ttgaaatagg
     3001 gataatccga cgttgactga agcgaacgtc cactcaaacc gaaattggac acctgataaa
     3061 gatgccccag cttctctgct aaaatacagg gataggcatc tttttcacgg ttctccagtc
     3121 cgtaaccgta agtcaggcta tcgccaactg ttgcaacttt tatggcccca cttccaacgg
     3181 ttaggacctc tggatacata atatctgaca cgtgaactcc tctgtttttc ttatttatct
     3241 attgtaccat cttgaaaaaa ataaatatac ttctgaattt gtgatataat gaacatatga
     3301 aaaaaaacgt gataattata ggcggaggga ttgtcggctc aactgccgct ttctacctct
     3361 cccaagatga aactgtcaac ttaaccctca ttgaccatgg tgtcggcact gctactcgtg
     3421 cagctgccgg gattatctgc ccttggatgg cccaaaagaa aaataaagat tggtataaac
     3481 tgacttccga aggcgcagtc ttctatcgca aattggtcgc agatttagag tctgctggag
     3541 ccaaggacat ccctttcaag caaactggaa ctatcggcct gaagagcaag ccagaattgc
     3601 tagaaaaaat ccaaaagatt gcggaagacc gccgtgtaga tactcccacc attggtcaaa
     3661 ttacaagctt gcaaggcgaa gaaatcagcg attatctccc accgctcaaa cctgactttt
     3721 acggcattca tttagaagga ggcggccgta tcgatggtgg gcgtttgatt gacattttgc
     3781 aggaagaagt tttgaaaaat ggcggagcgc ttctacaagg acaggcaaaa ttgctagacg
     3841 ctcacactgt ccaactagat ggacaagagc tgacagccga ccacatcatc ctggctactg
     3901 gagcctggct accacatatc ctagaaccac ttggttatcg ggtgaatgtc cgaccacaga
     3961 aaggacaatt gttagaatta gacaccaaac acgacaccaa caactggcca gtctgcatgc
     4021 cctatgggca aattgacata ttgcctttcg aaaaaggtaa aatcatcgtc ggagctacac
     4081 acgaggatga tatggggtat gacctgacac ttgacccgga aaaaattcaa gctatgcaag
     4141 ttaaggcagc cgagtttatg ccagacctag ccaactattc cgttgccaga acacggatcg
     4201 gaacccgtgc ctacacttca aactatgcac cattttatgg caatatcgaa gacatgaaga
     4261 atgtttgggt tgctagcggt ctaggttcct ctggtttgac aaacggtcca tttatcggct
     4321 ggcaaatcgc ccaagaaatc ttagggaagg aaaccagctt cgaccgctct gcctattctc
     4381 ctactaacta cattaaaaaa caataatata gctgaaaggc cactcgctct gagtagcctt
     4441 ttttctatga cttatcaact ttaatcatct tgtgaaaaag taaccaataa cctactgccc
     4501 caatacctag cagagaaaag gctattaaat agggagtttg gtcagccgtt tctttttctt
     4561 gactatccgc ctcatccccc ttagctactg ctttttcact ccctttgccc agattttgat
     4621 tgtttgaact gatacttgtg gaaggggtga cttgttcctt ctccgaatcc ttttcaaact
     4681 gaaaatccgg ttctgatgac tgattgaatg cccttggtaa acctgtacta ttagcctgac
     4741 caactgtctc ttgctccacg attagttcgc tagaaatgtt ggtattttta tatccattct
     4801 cacgcatatt tagtgtaggt ctaattgaaa tttttcctga atactcatta gacaaggaaa
     4861 taatctggtt aaagattcct cttccagcct gctctatttc cgttttttca gcagtcacat
     4921 gttctaactt gtcggccacc aaatcctcag aacttgacaa agctcccaca ggcaattcat
     4981 gcgtgacaga agaaccatga agagacaagt gaccaactgg taattcatgg ctgactgaag
     5041 aaccatgaag gaacaagtga ccaacgggaa cctcttgcgt gacagaactt ccatgaagga
     5101 acaagtgacc aacgggaacc tcttgcgtga cagaac
//
LOCUS       DASFQD010000139         5116 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.141, whole genome shotgun sequence.
ACCESSION   DASFQD010000139 DASFQD010000000
VERSION     DASFQD010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5116)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5116)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5116
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.141"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(251..1321)
                     /locus_tag="U1021_002010"
     CDS             complement(251..1321)
                     /locus_tag="U1021_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM4712503.1"
                     /translation="MKRLYSFFVGIIAIVLVLWGISYKLEADSTQGTTDKLVIYNWGD
                     YIDPELLAEFTAETGIQVDYQTFDSNESMYTKIKQGGTTYDLTIPSEYMISKMTEENM
                     LIKLDKSKIEGIENIDPRFMGLSFDKNNDYSIPYFWGTLGIVYNETMVENPPQEWEDL
                     WSEEYRDNIMLIDGVREVMGFGLQSLGYSLNSNNPTEIEKAAEHLYNLTPNVKAIVAD
                     EIKGYMIQDAAAIAVSFSGEASEMLDGNENLRYVVPSKGSNLWFDNMVIPKTAKNIDG
                     AYAFMSFMLRPENALRNAEYVGYSTPIPAAKAMLDEETQNDESFYPSEETMKKMEVYD
                     NLGPEMLGMYNDLYLQFKMYRK"
     gene            complement(1321..2091)
                     /locus_tag="U1021_002011"
     CDS             complement(1321..2091)
                     /locus_tag="U1021_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4712504.1"
                     /translation="MKKFANIYLTVAFLLLYLPIFYLIFYAFNEGGDMNGFTGFTLEH
                     FSSMLGDSRLMLILAQTFLLAFLSSLIATIIGTFGAIYIYQAKPRFQNALLSVNNILM
                     VAPDVMIGASFLILFTMIGFQLGFVSVLLSHIAFSIPIVVLMVLPRLKEMNADMISAA
                     YDLGATQPQMLKEIMLPYLTPAIIAGYFMAFTYSLDDFAVTFFVTGNGYSNLSVEIYS
                     RARQGISLEINALSTLVFLFSILLVVGYYFISREKEAN"
     gene            complement(2091..2891)
                     /locus_tag="U1021_002012"
     CDS             complement(2091..2891)
                     /locus_tag="U1021_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM4712505.1"
                     /translation="MKKTSRLFAIPYALWVFLFVLAPVALIIFKSFFDIHGNFTLANY
                     QTYFNSPNMTYLRMSFNSIFYAGIITLVTLLVSYPTAYFLTKLKHRQLWLMLIILPTW
                     VNLLLKAYAFIGIFGQHGSINQFLEFIGLGAQQILFTDFSFIAVAAYIEIPFMILPIF
                     NALDDLDKNLINASRDLGATPWQTFTKVIFPLSMNGVRSGVQAVFIPSLSLFMLTRLI
                     GGNRVITLGTAIEQHFLTTQNWGMGSTIGVVLILAMLLIMWMTKERKK"
     gene            complement(2875..4029)
                     /locus_tag="U1021_002013"
     CDS             complement(2875..4029)
                     /locus_tag="U1021_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712506.1"
                     /translation="MKKPIIEFKNVSKVFEDSGTTVLKDISFELEEGKFYTLLGASGS
                     GKSTILNIIAGLLDASSGDIYLDGQRINDVPTNKRDVHTVFQSYALFPHMTVFENVAF
                     PLKLRKVDKAEIERRVTEALQMVRLSGYENRSIQKLSGGQRQRVAIARAIINQPRVVL
                     LDEPLSALDLKLRTEMQYELRELQQRLGITFVFVTHDQEEALAMSDWVFVMNEGEIVQ
                     SGTPVDIYDEPINHFVATFIGESNILPGRMIEDYLVEFNGKRFEAVDGGMRPNEEVEV
                     VIRPEDLQITLPEEGKLQVKVDTQLFRGVHYEIIAYDDLGNEWMIHSTRKAIVGEVIG
                     LSFEPEDIHIMRLNETEEEFDARIEEYVEVEEVEDGLINAIEEERNEENL"
     gene            complement(4068..4976)
                     /gene="murB"
                     /locus_tag="U1021_002014"
     CDS             complement(4068..4976)
                     /gene="murB"
                     /locus_tag="U1021_002014"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEM4712507.1"
                     /translation="MKDKIRLELEGIDIRFDEPLKEYTYTKVGGAVDYLAFPRNRYEI
                     VRIVEFAKREGIPWQVLGNSSNIIVRDGGIRGFVIRMDKLNSVTVSGYTIEAETGANL
                     IETTKVALFHSLSGFEFACGIPGSIGGAVYMNAGAYGGEVAHILVSAQILTPAGYVET
                     LDNRELRFGYRSSILQENGAIVLSAKFALKPGNHTVIQQEMARLTHLRELKQPLEYPS
                     CGSIFKRPLGHFAGQLIMDAGLKGYRIGGVEVSEKHAGFMVNIENGTASDYENLIAHV
                     IQVVEKSSGITLEREVRIIGDPADTL"
BASE COUNT         1634 a         1076 c          952 g         1454 t
ORIGIN      
        1 ttcataactt ttcctcctag tttttctcct tcattattgg caaagccaat aaatatatta
       61 aaacataaaa ttatcagcat tgcaagtata ttctgaaaat tcagttattt attcaaacta
      121 tagctaggta tagttaatat ttataactgg actctgtgat actgaatgta ttaaatgaac
      181 agtaaaaagc aaccactatt tgcggttgct catactattc tgacttgaaa actagatatg
      241 gatattcaga ctatttccga tacatcttga attggagata gaggtcatta tacattccaa
      301 gcatctctgg tccaagatta tcataaactt ccatcttctt catcgtttct tctgaaggat
      361 agaaggattc gtcgttctga gtttcttcat ccaacatggc ttttgctgca ggaattggtg
      421 ttgagtagcc aacatattct gcattgcgaa gcgcattttc aggacgaagc ataaaactca
      481 taaaggcgta agctccatca atattttttg ctgtttttgg aataaccatg ttatcgaacc
      541 aaaggttaga accttttgat ggtacaacat agcgcagatt ttcatttcca tctaacattt
      601 cactcgcctc acctgagaac gaaacagcaa ttgctgccgc atcttgtatc atataacctt
      661 ttatctcatc agcaacaatt gctttgacat ttggagttaa attatataga tgttcggctg
      721 ccttttcaat ctcggtaggg ttgttggaat tgagactata gcccagtgat tgtagaccaa
      781 agcccatgac ttcacgcaca ccatcaatta acatgatatt gtcacggtac tcctctgacc
      841 acaagtcttc ccattcctga ggaggatttt ctaccatggt ttcattgtaa acaatgccca
      901 aggttcccca gaaatatgga atagaataat cattattctt gtcaaagcta agtcccataa
      961 atcgtggatc aatattttct atcccttcaa tcttagactt atctagcttg attaacatat
     1021 tttcttctgt catcttagaa atcatgtact cagatgggat tgtcaaatcg tatgttgttc
     1081 caccctgctt aatcttggtg tacatcgatt cattggagtc aaaggtctga taatctacct
     1141 gaatacctgt ttcagcagtg aattctgcga gtaattctgg gtcaatataa tcgccccagt
     1201 tatagatgac aagtttatca gttgtccctt gggttgaatc agcttctaac ttataactaa
     1261 ttccccataa aactaggaca atagctataa ttcctacaaa aaatgaatac aatcgtttca
     1321 ttagttggcc tccttttcac gtgagatgaa ataataaccc acgaccaata agatagagaa
     1381 aaggaaaaca agggttgata gggcattgat ttccaaagaa atcccttgac gagcccgcga
     1441 gtagatttca accgaaaggt ttgaatagcc attccctgtc acaaagaagg tcacagcaaa
     1501 gtcatccaag gaataggtaa aggccatgaa gtagcctgca atgatggctg gtgttaggta
     1561 tggcaacatg atttctttca gcatttgtgg ctgagttgcc cccaaatcat aagctgctga
     1621 aatcatatcg gcattcattt ccttcaagcg tggcaaaacc atcaatacta cgattggaat
     1681 agaaaaagca atatgactga gcaatactga gacaaagcca agctggaaac caatcatggt
     1741 aaagagaatt aggaaactcg ccccaatcat gacgtctgga gctaccatca agatattatt
     1801 gacagacaag agtgcatttt gaaaacgagg ttttgcctga tagatataga tggcaccgaa
     1861 agttccgata atggtcgcaa tcaaagaact caagaaggcc aacaagaagg tttgagccag
     1921 aatcagcatt agtcggctat cgccaagcat agatgaaaaa tgctccaagg taaagcctgt
     1981 aaagccattc atatctccgc cttcattaaa ggcataaaaa ataagataga aaatcggtaa
     2041 gtagagaagg agaaaggcaa ctgttaagta gatatttgca aatttcttca ttatttcttc
     2101 ctctctttcg tcatccacat aatcaagagc atggctaaaa tcaagaccac acctatggtt
     2161 gaacccattc cccagttttg tgttgtgaga aagtgttgtt cgatagctgt accaagcgtg
     2221 atcactcggt taccgccaat caaacgggtc aacatgaaga ggctcagact tggaatgaaa
     2281 accgcctgta caccagaacg gacaccattc atagaaagag gaaaaataac ttttgtgaag
     2341 gtctgccaag gagttgcccc caaatcacga ctggcattga ttaggttttt atccaaatca
     2401 tccaaggcgt taaagatcgg caaaatcata aacggaatct cgatataggc tgcaacagca
     2461 ataaaggaga aatctgtgaa aagaatttgc tgagctccta gaccaataaa ttctaggaac
     2521 tggttgatag agccgtgttg tccaaaaata ccgataaagg cataggcttt cagcaaaaga
     2581 ttgacccagg tcggcaagat aatcaacatg agccagagct gtctatgctt gagtttggtc
     2641 aaaaaatagg ctgttgggta ggaaaccaaa agcgtgacca gagtaataat acctgcgtaa
     2701 aaaatggagt taaaactcat tcgcagatag gtcatatttg gcgagttaaa ataggtctgg
     2761 taattagcca aagtgaaatt gccatgaata tcaaagaaag atttgaagat aatcaaggca
     2821 actggagcga gtacaaagag aaagacccat agggcatagg gaattgcaaa aagcctagag
     2881 gttttcttca ttgcgttcct cctcaatggc gttaatcaag ccatcttcta cttcttccac
     2941 ttccacatat tcttcgatac gggcatcgaa ttcttcctct gtttcattga gacgcatgat
     3001 atgaatatct tctggctcaa aacttagtcc aatcacttct ccgacaatag ccttacgagt
     3061 tgagtgaatc atccactcat taccgaggtc gtcataggcg atgatttcat agtgaacccc
     3121 acggaagagc tgagtatcca cttttacctg caatttgcct tcctcaggta gggtaatctg
     3181 caaatcttca ggacggataa caacttcaac ttcttcatta ggacgcatac cgccatcgac
     3241 agcttcaaag cgtttgccgt taaactcaac cagatagtct tctatcatgc gacctggaag
     3301 gatattggat tcaccgatga aggtagcaac aaaatggttg attggctcgt cgtaaatgtc
     3361 cactggcgtc ccagactgaa caatttcacc ttcattcatg acaaaaaccc agtcactcat
     3421 ggccagagct tcttcttggt catgggtaac gaagacgaag gtaattccta gacgttgttg
     3481 caattcacgc agttcgtact gcatttctgt ccggagtttc aagtccaggg cagaaagtgg
     3541 ttcatctagc aagacaacgc gaggctggtt gataatcgca cgtgcaatag caacccgctg
     3601 gcgttgacca ccagacaatt tctgaatgga acgattttca taaccagaaa gtcggaccat
     3661 ttgtaaggct tctgtcacac ggcgttcgat ttcagccttg tcaacctttc gtaatttaag
     3721 aggaaaagcc acattttcaa agacagtcat atgtgggaaa agggcatagg actggaaaac
     3781 agtatggaca tcccgtttat tggtcggaac atcattaatc cgttgaccgt ccagataaat
     3841 atcacctgaa ctcgcatcca ataaaccagc aataatgttc aaaatcgttg atttacctga
     3901 accagaagct cctaaaaggg tataaaattt cccctcttcc aattcaaaac taatatcctt
     3961 taatacagtt gttccactgt cttcaaatac ttttgaaacg ttcttaaatt caataattgg
     4021 ctttttcaat tctcataaat tccttctttt ttgtaagagc ctgatggcta gagtgtatca
     4081 gcaggatcgc cgataatacg aacctctctc tccagagtaa ttcctgaaga tttttcaaca
     4141 acttgaatca catgggcaat caaattttcg taatcagatg ctgtaccatt ttctatattg
     4201 accataaagc cagcgtgttt ttcagaaact tcgactccac caattcgata accttttaaa
     4261 cctgcatcca taatcaactg tcctgcgaag tgaccaagtg gacgtttgaa gattgaacca
     4321 caagatggat attccaaagg ttgcttgagc tcgcgtaaat gtgtcaaacg agccatttct
     4381 tgttgaataa ccgtatgatt acctggcttg agggcaaatt ttgcagacaa aacaatcgca
     4441 ccgttttcct gcaaaataga agaacggtag ccaaatcgta actcacgatt gtccaatgtt
     4501 tcgacataac ctgctggagt caaaatctgc gctgaaacta aaatgtgtgc cacttcacct
     4561 ccgtaagcac ctgcattcat atagacagca ccaccaatgc ttcccggaat accacaagca
     4621 aattcaaatc ctgataaaga atggaaaaga gcaacttttg ttgtttcaat cagattggca
     4681 cctgtttctg cttcaatggt gtatcctgat acagtaacgg agttaagttt atccatacgg
     4741 ataacaaaac cacgaatacc gccatcgcgg acaatgatat tacttgaatt tcctaatact
     4801 tgccatggaa taccttcgcg tttagcaaat tctactatac gaacaatctc gtaacgattc
     4861 cgtggaaaag ctagataatc aacagctcct cctacttttg tataggtata ttcttttaaa
     4921 ggttcatcga atcgaatatc gatgccttct aattcaagcc taattttatc tttcataacc
     4981 ttctcatttc aatttaagat atacaggatt tattatacca aaaattacag gagaaaacga
     5041 ataaaattca acaaaaatac tttcacaagc caaattaatt tgtcccaata ttttgaaatg
     5101 gagaatggaa tgcaca
//
LOCUS       DASFQD010000140         5083 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.142, whole genome shotgun sequence.
ACCESSION   DASFQD010000140 DASFQD010000000
VERSION     DASFQD010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5083
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.142"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..159)
                     /locus_tag="U1021_002015"
     CDS             complement(<1..159)
                     /locus_tag="U1021_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009660260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone acetyltransferase"
                     /protein_id="HEM4712508.1"
                     /translation="MIVLKPVDESSYQAVLDLTVAEEDKGLVAPNVRSLADAWLYREN
                     GSGKELDGF"
     gene            complement(162..749)
                     /gene="yqeK"
                     /locus_tag="U1021_002016"
     CDS             complement(162..749)
                     /gene="yqeK"
                     /locus_tag="U1021_002016"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     YqeK"
                     /protein_id="HEM4712509.1"
                     /translation="MIAADLTFDRQALLEKIRVAMKPARFQHVLGVEEAALALADRYG
                     CDPKKASLAALLHDYAKEVEDQVFLDLIAKYDLDKALLNWDNNIWHGVVGAYKIAEDF
                     GLKDEEIFQAIQRHTIGAGQMTLLDKVLYVADYIEPNRDFPGVDEARRIAKESLDKAV
                     AYETAQTISYLAKKGIPIYPQTLETYNGYVAWLKE"
     gene            complement(746..1378)
                     /locus_tag="U1021_002017"
     CDS             complement(746..1378)
                     /locus_tag="U1021_002017"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HEM4712510.1"
                     /translation="MAIELLTPFTKVELEVEKKETNRKQVGILGGNFNPVHNAHLIVA
                     DQVRQQLKLDEVLLMPEFIPPHVDKKETIDEYHRYSMLKMAIAGIEGLGIETIELERR
                     GVSYTYDTMKLLKEKNPNTDYYFIIGADMVDYLPKWHRIDELVQLVQFVGVQRPRYKA
                     GTSYPVIWVDVPLMDISSSMVRSFIKQGRVPNFMVPHEVLDYIEEKGLYQ"
     gene            complement(1391..1702)
                     /gene="yhbY"
                     /locus_tag="U1021_002018"
     CDS             complement(1391..1702)
                     /gene="yhbY"
                     /locus_tag="U1021_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000060164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HEM4712511.1"
                     /translation="MMLTSKQRAFLNSQAHSLKPIIQIGKNGLNDQIKTSVRQALDAR
                     ELIKVTLLQNTDENIHEVAEILEEEIGVDTVQKIGRILILFKQSSKKENRKISKQVKE
                     I"
     gene            complement(2021..3127)
                     /gene="yqeH"
                     /locus_tag="U1021_002019"
     CDS             complement(2021..3127)
                     /gene="yqeH"
                     /locus_tag="U1021_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000391231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YqeH"
                     /protein_id="HEM4712512.1"
                     /translation="MEELFCIGCGAQIQTLDKAVAGFTPQSALEKGLETGQLYCQRCF
                     RLRHYNEISDVNISDDDFLKLLHSVGESDALVVNVIDIFDFNGSVIPGLPRFISGNDV
                     LLVGNKQDILPKSVKTGKVTQWLTERAHEIGMRPVDVVLTSAQNKQAIKDLIEKIEQH
                     RKGRDVYVVGVTNVGKSTLINAIIQEITGDKDVITTSRFPGTTLDKIEIPLDDGSYIY
                     DTPGIIHRHQMAHYLTAKNLKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDFVAGERQ
                     GFTAFFDNELQLHRTKLQGASEFYQKHAGSLLVPPTSKELKEFPELVRHEFTINEKTD
                     VVFSGLGWIRVNEKAKIAAWAPKGVDVVIRKAII"
     gene            complement(3128..3655)
                     /locus_tag="U1021_002020"
     CDS             complement(3128..3655)
                     /locus_tag="U1021_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqeG family HAD IIIA-type phosphatase"
                     /protein_id="HEM4712513.1"
                     /translation="MSLENYMPDFALEKAYDVTVESLKKHGIKVVFVDLDNTLIAWNN
                     PDGTPEMRQWLHDLQDAGIPVVVVSNNKYERVKRAVEKFGIEFEAFALKPFTFGINRA
                     LKRFDVQPYEVIMIGDQLMTDIRAAKRAGLKSVLVKPLIKTDSINTQINRWRERRTMK
                     KIIAKYGAIDYKREM"
     gene            complement(3839..4213)
                     /locus_tag="U1021_002021"
     CDS             complement(3839..4213)
                     /locus_tag="U1021_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712514.1"
                     /translation="MNPLRKELRTVAVEVSDLALDYAVRLAQSLNSTLRYHNYDSLIA
                     IAKTKGVEPKGKDCQSFSEYRQRYSLYDAKKLIYRALAWRLFDDSHADYGHALTILGL
                     DEDESGVEQIGFAFSKFTLDID"
     gene            complement(4420..5049)
                     /locus_tag="U1021_002022"
     CDS             complement(4420..5049)
                     /locus_tag="U1021_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HEM4712515.1"
                     /translation="MIKEFCSENHVAVVKALSLGAQRVELCDNLAVGGTTPSYGVIKH
                     VCQLAHENEATVMTMIRPRGGDFCYDEAEVEMMVEDCKAAIELGADGLVYGLLTEENW
                     LDEPALERLFAVSQDCQIVFHMAFDQIPRERQFEALDWLVEHGVTRILTRGSLTGSAL
                     NNVEWLQEIVAYAQGKIEILIGGGLTVDNVPTLLEALPINQVHGTRLFW"
BASE COUNT         1423 a         1238 c          963 g         1459 t
ORIGIN      
        1 gaacccatcg agttctttcc cactcccgtt ttctctgtaa agccaagcgt cagcgagtga
       61 acgcacgttg ggagccacga ggcccttgtc ctcctcggct actgtcaagt ccaagacagc
      121 ttgataggag ctttcatcca caggttttaa tacaatcatc cctactcctt caaccaagca
      181 acatagccat tataggtttc caaggtttgt ggataaatgg gaattccctt cttggctaag
      241 taagaaatgg tttgggcagt ttcataggct actgccttgt ccaaggactc ttttgcgata
      301 cgacgcgcct cgtccacccc aggaaaatcc cgattgggtt cgatgtagtc cgccacatag
      361 agcaccttgt ccagcaaggt catctgccca gcaccaatgg tgtgtcgttg aatggcttgg
      421 aaaatttcct catctttcaa gccaaaatct tctgcgattt tataggcgcc aactacaccg
      481 tgccagatgt tattatccca gttgagcagg gccttgtcca aatcatactt ggcaatcaag
      541 tccaaaaaaa cttggtcttc cacttccttg gcatagtcat gcaagagtgc tgccagactg
      601 gcttttttcg gatcacagcc gtatcgatct gccaaggcaa gcgccgcctc ttccacaccc
      661 aagacatgtt ggaagcgcgc tggcttcatg gctacacgga ttttttccaa aagagcttga
      721 cggtcaaagg tcaaatctgc tgcaatcatt ggtaaagtcc tttttcttcg atatagtcca
      781 gaacttcatg aggcaccata aaattcggca cccgtccttg cttgataaag ctccgtacca
      841 tgctggagga aatgtccatc aagggcacat ctacccagat aaccggatag gacgtccctg
      901 ccttgtaacg aggacgctgg acaccaacaa actgcaccaa ctggaccaat tcatcaatcc
      961 tgtgccattt tggaaggtag tctaccatat ctgcaccgat gatgaaataa taatccgtat
     1021 taggattttt ttccttcagc aatttcattg tgtcgtaggt atagctgaca ccacggcgtt
     1081 ctagttcaat ggtttcaatc cccaagccct caatacctgc aatagccatc ttgagcatgg
     1141 aatagcgatg gtattcgtca atggtttctt ttttatccac atgaggcgga atgaattctg
     1201 gcatgagcaa gacttcatcc agcttcaact gttgacggac ctggtctgcc acaatcaaat
     1261 gagcattatg gacagggttg aaattccctc ccagaatccc cacttgtttg cgattggttt
     1321 ctttcttttc aacctctaat tcaaccttgg taaagggtgt taagagttca atagccatag
     1381 gctctccttc ttagatttct ttgacctgtt tagaaatttt acggttctct ttcttgctag
     1441 attgtttgaa taaaatcaag atgcgaccga ttttttggac cgtatccaca ccgatttctt
     1501 cttccaagat ttctgctact tcgtgaatgt tttcatccgt attttgtagc aaggtcacct
     1561 taatcaattc acgcgcatcc aacgcctgac gaacactggt tttaatctgg tcatttagac
     1621 catttttccc aatctgaata atgggtttga gactatgtgc ctgactgttc aaaaaggcac
     1681 gttgttttga agttagcata atttattata caaagggcgt tgtaacagac tgggagactg
     1741 ttacaatcgg gaaataaaga aaacaaagtt tttccttatt gcgccgatat acttagcccg
     1801 tgttcaaatc agaagacttg aacttccttt ctctttaatt gtaaaaactg aaatcaaata
     1861 cctcttatac tcaatgaaaa ttaaaatcag actaggcgac gcagatgcag atagaaccct
     1921 actactttca cgctttcagg tagcaggctg taaagctcca ctggagcttt acactcatca
     1981 aatcaagtca acaacgtctg cttttaattt tcgaagagta ttagataatc gccttgcgaa
     2041 tgaccacatc cacaccctta ggagcccagg cagcaatctt ggctttttca ttgacacgaa
     2101 tccaaccaag tcctgagaag accacatccg tcttctcgtt gatggtaaat tcatgacgga
     2161 ccagttcagg aaattctttc aattccttgc tggttggtgg cactaaaagt gagcccgcat
     2221 gtttctgata aaactcgcta gctccctgca acttggtgcg gtggagttgg agctcattat
     2281 caaagaaggc cgtaaagcct tggcgttcac cagccacaaa gtcaaatcgt cccagaccag
     2341 ccaagaacaa ggtttgttct ggattgagct ggtaggtctt tggcttgatt tccttgcgag
     2401 ggctgatgta cttgaggttt ttagccgtca aataatgggc catctggtga cggtggataa
     2461 ttcctggcgt gtcatagatg tatgaaccat catccagagg gatttcaatc ttatccagcg
     2521 tcgttccagg gaaacgtgaa gtcgtaatga catccttgtc ccctgtgatt tcttgaataa
     2581 tagcgttaat caaggttgac ttgccgacat tggtcacgcc gaccacatag acatcccgtc
     2641 ccttgcggtg ttgttcaatc ttttcaatca aatccttgat agcctgctta ttttgggctg
     2701 aagtcaagac cacatcaacc ggtcgcatgc cgatttcatg tgcccgctcg gtcaaccact
     2761 gagtaacctt gcctgtcttg acagacttgg gtaaaatgtc ctgcttgttg ccgaccaaaa
     2821 gcacgtcatt tccagaaata aagcgaggta aacctggaat gactgaccca ttgaaatcaa
     2881 aaatatcaat gacattaacc accaaggcat cgctttctcc tacgctatgg aggagtttca
     2941 agaaatcatc gtctgagata ttgacatctg aaatctcatt gtaatggcgc aaacggaaac
     3001 aacgttggca gtagagttgc cctgtttcca ggcctttttc tagggctgat tgaggtgtaa
     3061 aaccagcgac agccttgtct agcgtctgaa tctgggcacc acagccgata caaaataatt
     3121 cttccactta catctccctc ttgtagtcta tcgctccata tttagcgatg atttttttca
     3181 tagtccgtcg ctcacgccaa cggttaatct gcgtattgat agagtccgtc tttatcaagg
     3241 gtttgaccaa gacagacttg agaccagctc gcttagcagc ccgaatatcc gtcatcagct
     3301 gatcgccaat cataattacc tcatacggct ggacatcaaa gcgtttcaaa gcacggttaa
     3361 tcccaaaggt gaaaggcttg agagcgaagg cttcaaattc aatcccaaat ttttcaaccg
     3421 cccgtttgac acgttcgtat ttattgttag acaccaccac aacaggaata cctgcgtcct
     3481 gcaaatcatg taaccactgg cgcatctctg gcgtaccatc gggattattc caagcaatca
     3541 aggtattatc caagtcaaca aacactactt ttatgccatg ttttttcaag ctttcgacgg
     3601 tcacatcata agccttttcc aaggcaaaat ccggcatgta attttctaaa ctcactgtcg
     3661 tctccaaagt tttttatcag ataattatac catttttcta agaaaaatgc gaatcgatag
     3721 cagaaaacac tcggatcaac cgagtgtttt ctagaggtaa tgtaatggta gttgtgaatt
     3781 aaatctgacc ttcttccaaa atccaatctt tcggaatgaa aatcatatgg gttagcaatc
     3841 aatcaatatc aagagtaaat tttgaaaaag caaaaccgat ttgctctact cctgactcat
     3901 cctcatccaa ccccaaaatg gtaagagcat gtccataatc tgcatgacta tcatcgaata
     3961 gacgccacgc gagagcgcga taaattaact tcttagcatc atagagactg taacgctgtc
     4021 tgtactctga aaatgattga caatccttac ctttcggttc tactcctttg gttttagcaa
     4081 tggcaatcaa gctatcataa ttatgataac gcaaagtact attcaaggat tgggctaaac
     4141 gaacagcata gtccaaagct aaatcactca cctcaacagc cacagttctc aattctttac
     4201 gtaggggatt caatagagac gcagcagttt ctagtctgta taccggactt taacaaacaa
     4261 aaatgaaaac agccgaacat gtcgactgct tccgtggaga ttatatgaaa aagaataaat
     4321 atattgtatc ttccaatgct taaacaaacc ttaacttcta aacatttctg aataaacttc
     4381 gattattact ctgtaattta tttcactttc aaagctacct taccaaaata atctcgttcc
     4441 atgtacttga ttgattggta atgcttctaa taacgttggc acattgtcca cagtcaatcc
     4501 tccaccaatc aaaatctcaa ttttaccttg tgcataggcg acaatttcct gtaaccattc
     4561 cacattgttc aaggcagacc ctgtcagact cccacgcgtc aaaatccgtg tcactccatg
     4621 ttctaccagc caatcaagag cctcgaattg gcgttcgcga ggaatttggt caaaagccat
     4681 gtgaaagaca atctgacagt cctgcgaaac agcaaacagt ctttccaagg ctggttcgtc
     4741 caaccaattt tcctcggtta acaaaccata aaccagacca tctgccccca gttcaatcgc
     4801 tgctttacaa tcttcaacca tcatttccac ctctgcttca tcgtagcaaa aatctccacc
     4861 gcgagggcga atcatggtca tgactgtggc ttcattctca tgagccagtt gacaaacatg
     4921 tttgatcact ccataactcg gcgtcgttcc gccaaccgct aaattatcac acagttcaac
     4981 tctttgagca cccagagaaa gagctttcac cacagctaca tgattttcgg aacaaaattc
     5041 tttaatcatc tttattcctt tcaagtcttt tttctttagt ata
//
LOCUS       DASFQD010000141         5059 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.143, whole genome shotgun sequence.
ACCESSION   DASFQD010000141 DASFQD010000000
VERSION     DASFQD010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5059)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5059)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5059
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.143"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..334)
                     /locus_tag="U1021_002023"
     CDS             complement(<1..334)
                     /locus_tag="U1021_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEM4712516.1"
                     /translation="MDLQELCRKVIQARPRNSHKGSYGRVLLIGGLYPYGGAIIMAAL
                     ASVNSGAGLVTVATEKDNIPALHSHLPEAMVFSFDDQALLISSLENADLVLIGPGFGE
                     NSRAEQLLD"
     gene            432..1055
                     /gene="nth"
                     /locus_tag="U1021_002024"
     CDS             432..1055
                     /gene="nth"
                     /locus_tag="U1021_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018378713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEM4712517.1"
                     /translation="MVLSKKRARKVIEEIIALYPDAKPSLDFRNHFELVCAVLLSAQT
                     TDAAVNKATPGLFAAFPTPQAMAAAEVKDIEPYISRLGLYRNKAKFLKDCAQQLMERH
                     NGIVPQTREELEALAGVGRKTANVVLSVGFGIPAFAVDTHVGRICKHHDIVKKSATPL
                     ETEKRVMEVLPPELWLPAHQAMIYFGREVCHPKNPECEKFPQLYEFD"
     gene            1341..2327
                     /gene="guaC"
                     /locus_tag="U1021_002025"
     CDS             1341..2327
                     /gene="guaC"
                     /locus_tag="U1021_002025"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017769630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HEM4712518.1"
                     /translation="MFNETPVFDYEDIQLIPNKCIINSRSEADTTVTLGKYSFKLPVV
                     PANMQTIIDEDVAEMLAKEGYFYIMHRFDEAGRIPFIKRMHEQGLIASISVGVKEYEY
                     EFVTSLKADAPEFITIDIAHGHAESVIKMIQHIKKELPPETFVIAGNVGTPEAVRELE
                     NAGADATKVGIGPGKVCITKVKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDI
                     AKSIRFGASMVMIGSLFAGHIESPGKTIEVDGEKFKEYYGSASEYQKGAYKNVEGKKI
                     LLPAKGHLKDTLVEMEQDLQSSISYAGGRDITSLKHVDYVIVKNSIWNGDSI"
     gene            2397..3746
                     /locus_tag="U1021_002026"
     CDS             2397..3746
                     /locus_tag="U1021_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM4712519.1"
                     /translation="MYQTRNNKEKLWLFIKIFLPILIYQFANYSASFIDTMMTGQYST
                     MDLAGVSMATSLWNPLFSFLTGIVSALVPIIAQYLGKGERDKIREEFHQFVYLAIGLT
                     ILLLCSILFIAVPALAQFGLNESVFQVGRQYLYFISIGILPLLLFSVCRSFFDALGLT
                     QLSMYLMLLLVPFNSLFNYLLIYGKMGLPALGGAGAGLGTALAYWAVLLVIVIVMCKN
                     KTIASYQIWQWSPIDLSLLKEGLKIGLPIGLQVFAEVAIFAVVGLYMAKFSAQIIAAH
                     QSAMNFATLLYAFPASVSSALAIVIAYEVGAKRPQDVKAYSRLGRLVALGFAGLTLTF
                     LYFFRSKVAYLYGNDAEFIRLTSHFLSFALMFQLADAFTAPIQGILRGYKDTTVPFIL
                     GLVAYWSMTFPVAFLLERFFQMGPEAYWIGLISGIFVCGIALNLRLIKIAHSHLSVK"
     gene            3844..4362
                     /gene="rimM"
                     /locus_tag="U1021_002027"
     CDS             3844..4362
                     /gene="rimM"
                     /locus_tag="U1021_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016465641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEM4712520.1"
                     /translation="MNYFNVGKIVNTQGLQGEMRVLSVTDFAEERFKKGAKLALFNDK
                     DQFVMEVEIASHRKAKNFDIIKFKGMYHINDIEKYKGFSLKIAEENLTDLEDGEFYYH
                     EIIGLDVYENDQLIGQIKEILQPGANDVWVVKRKGKKDLLLPYIPPVVLNIDIPNNRV
                     DVELLEGLDDEN"
     gene            4352..>5059
                     /gene="trmD"
                     /locus_tag="U1021_002028"
     CDS             4352..>5059
                     /gene="trmD"
                     /locus_tag="U1021_002028"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000686892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEM4712521.1"
                     /translation="MRIDILTLFPEMFAPLEHSIVGKARDKGLLEINYHNFRENAEKA
                     RHVDDEPYGGGQGMLLRAQPIFDTMDSIEQTKPRVILLDPAGRTFNQAYAEELAQEEQ
                     LIFICGHYEGYDERIKTLVTDEISLGDYVLTGGELAAMTMIDATVRLIPEVIGKEVSH
                     TDDSFSSGLLEYPQYTRPYEYRGMVVPDVLMSGHHENIRKWRLEESLRKTYQRRPDLL
                     ENYNFTAEELTIFEKIKA"
BASE COUNT         1439 a          979 c         1081 g         1560 t
ORIGIN      
        1 agtccaataa ctgttcagct ctgctatttt ccccaaaacc tggaccaatc aataccaagt
       61 cagcattttc taagctactt atcagtaagg cttgatcgtc aaatgaaaat accatggctt
      121 caggcagatg actatgtaag gctggtatgt tatctttttc agtagcaaca gttaccaagc
      181 ctgctccact gttgacgctt gctagtgcgg ccatgataat cgctccacca tagggataca
      241 gtccaccaat cagcaagact cgaccatagc ttcccttatg gctgttgcgt ggccttgctt
      301 gaattacctt tctgcagagt tcttgtaagt ccatacttat tccccctttt ctttttatta
      361 taccacgagg aatgaggttt atgacaatcc agattttaga taaatccaag ttttcatgct
      421 ataatgaatt catggtatta tcaaaaaaac gtgcaagaaa agttattgaa gaaatcatcg
      481 ctctatatcc tgatgctaag cctagcttgg actttcgaaa tcactttgag ttggtatgtg
      541 cagtgctctt atctgctcaa actacagatg ctgcggtgaa taaggcaaca cctggtttgt
      601 tcgcagcttt ccctacgccc caagccatgg cggcagcaga agtgaaggat attgagcctt
      661 atatttctcg tttgggtttg taccgaaaca aggcaaagtt tttaaaagac tgtgcccagc
      721 agttgatgga acggcataac ggcattgttc ctcaaactcg tgaggaatta gaagccttgg
      781 caggagtggg aagaaaaacg gccaatgttg ttttaagtgt cggtttcgga attcccgcct
      841 ttgcagttga tacccacgtg ggacggattt gtaaacacca cgatattgtc aaaaaatcgg
      901 ctacaccctt ggaaacagaa aaacgagtca tggaagtctt acctcctgaa ctctggctcc
      961 ctgctcatca agctatgatt tattttggtc gtgaggtttg ccatcctaag aaccctgaat
     1021 gcgaaaaatt cccacaatta tatgaatttg actaaaaaat cttctgtttt tgaagatttt
     1081 tttagttttt ctgtaaaatt gtttgagtaa attctgaaca ttttttaaaa ttttataaga
     1141 atagtaactc aaaaaagaat tatacgaatg ttatatttta taaacaagcc caaaaagtga
     1201 tatatccgaa tattgtttat ataggtttct tttttattga caaaacacaa acaataagct
     1261 atactatatc ttgtaataag gaaaaaatac gaaaaacaaa ccgtttttct gttccaatgt
     1321 taagaaaaag aggtagaagc atgttcaacg aaactccagt ttttgactac gaagatattc
     1381 agcttattcc aaataaatgt atcatcaata gccgttccga ggcagataca acagtgactc
     1441 ttgggaaata tagctttaaa ttaccagttg ttccagctaa tatgcagact attattgatg
     1501 aagatgtggc agaaatgctt gccaaagaag ggtatttcta catcatgcat cgtttcgatg
     1561 aagctggtcg tattccattt atcaaacgca tgcacgagca aggtttgatt gcttctatct
     1621 ctgttggcgt aaaagaatat gaatatgagt ttgtgactag cttgaaagct gatgctcctg
     1681 agtttatcac cattgatatt gctcatggcc atgcagaaag tgttatcaag atgattcaac
     1741 atatcaagaa agaactgcct cctgagacgt tcgtcattgc aggtaatgtc ggtactccag
     1801 aagcagttcg tgaactagaa aatgctggtg cggatgcgac aaaagttggt attggtccag
     1861 gtaaagtatg tattacaaag gttaagactg gttttggtac aggtggttgg cagttggctg
     1921 cccttcgttg gtgcgcaaaa gctgcccgta aaccaattat tgcggacgga ggtatccgta
     1981 cccacggaga tattgccaaa tccatccgct tcggtgcaag catggtcatg attggttcgc
     2041 tctttgctgg tcacatcgaa agcccaggta aaacaattga agttgatggt gagaaattca
     2101 aagagtacta cggttcagca tctgaatacc aaaaaggtgc ctataaaaac gtagaaggta
     2161 agaaaatctt actccctgcc aaaggacact tgaaagacac tctggttgaa atggagcaag
     2221 atttgcagtc atctatttct tatgcaggag gacgtgacat taccagcttg aagcatgtgg
     2281 actatgttat cgtgaaaaac tctatctgga atggtgactc tatctagtca aagaggactt
     2341 gcaatgcagg tccttttctt gttacaatat ttatataaaa ttgaaagaga ataagtatgt
     2401 accaaacaag aaataacaaa gagaagctct ggctctttat caaaatattt ttgcccattt
     2461 taatttacca atttgctaat tactccgcat cctttatcga taccatgatg actggtcagt
     2521 atagtaccat ggatttggca ggtgtttcca tggcaacaag tctttggaat ccgctttttt
     2581 catttctaac agggattgta tctgcgttgg tcccaatcat cgctcaatat ttaggaaaag
     2641 gtgaaagaga taagattcgt gaggagtttc atcagtttgt ctatctagct atcggattaa
     2701 ccattttact cttgtgctcg atccttttta tcgctgttcc cgccttggct cagtttggac
     2761 ttaatgaatc tgtttttcaa gttggtcggc agtacctcta ttttatttcc attggtatcc
     2821 tgcctctctt gctctttagt gtctgtcgct cttttttcga cgctctcggc ttgactcagc
     2881 tatccatgta ccttatgttg ctcttggttc cctttaacag cctctttaac tatctcttaa
     2941 tttatgggaa aatgggcctc ccggccctgg gcggagctgg agctggattg ggtactgctt
     3001 tagcttactg ggcggtattg ctagtaatcg tcattgtcat gtgcaaaaat aagactattg
     3061 catcttatca gatttggcag tggagtccga ttgacctttc tttattgaag gaaggcttga
     3121 aaattggttt gccgattggt ttacaagtct ttgcagaagt agcaattttt gcagtagtag
     3181 ggctctacat ggcaaaattt tcagcacaga ttatagcagc ccaccagtca gctatgaact
     3241 ttgcgacatt attatatgcc tttcctgcct cggtttcttc agccctagct attgtcattg
     3301 cttatgaagt aggggctaaa cgaccacagg atgtgaaagc ctacagccgt ctgggacgct
     3361 tggttgcact tggttttgca ggcctaacac tcactttcct ttattttttc cgctccaaag
     3421 ttgcctacct ttatggtaat gacgcagaat ttatccgtct gacctcgcat ttcctgagct
     3481 ttgccctcat gttccagtta gcagatgcct ttacagcacc tattcagggg attttacgtg
     3541 gttacaagga tacgactgtt ccatttatac ttggtttggt tgcctattgg tccatgacct
     3601 tcccagtcgc attcttgctt gaaagatttt tccaaatggg tccagaagcc tattggatcg
     3661 gtcttatttc agggattttt gtctgcggaa tagctcttaa tttgcgcttg atcaaaatag
     3721 ctcattctca cttgtccgtg aaataaatta actatgaaag tcggaggcat ccggcttttt
     3781 ctctcttgtg aaaatatctt gctcatgtta aaataaaagg atagaaaatc aaatggagaa
     3841 tttatgaatt attttaacgt aggaaagatt gttaacacgc aaggcctaca aggggaaatg
     3901 cgtgttttat ctgtgaccga ttttgcagaa gaacgtttta aaaaaggtgc aaaattggct
     3961 ttgtttaatg acaaggacca gtttgtcatg gaagttgaaa ttgccagtca ccgcaaagct
     4021 aagaactttg atattatcaa gtttaagggt atgtaccaca tcaatgatat tgagaagtac
     4081 aagggcttta gtttgaaaat tgccgaggaa aacttgactg atcttgaaga cggtgagttt
     4141 tattaccatg aaattattgg tttggatgtt tatgaaaatg accagctaat tggacaaatc
     4201 aaggaaatct tgcaacctgg tgctaatgat gtttgggtgg tcaaacgaaa agggaagaaa
     4261 gacttgctct tgccttatat tccgcctgta gttttgaaca ttgatattcc aaacaatcgc
     4321 gtagatgtgg aattgcttga gggcttggac gatgagaatt gatattttga ccctcttccc
     4381 tgagatgttt gcacctctag aacactctat tgtgggtaag gcgcgtgaca agggcttgtt
     4441 ggaaatcaac taccacaatt tccgagagaa tgctgaaaag gctcgccatg tggacgatga
     4501 accctatggt ggaggacaag gcatgttgct ccgtgcccag ccaatttttg ataccatgga
     4561 tagcattgaa caaaccaagc cacgtgttat cctattggat cccgctgggc gtactttcaa
     4621 tcaggcctat gccgaagaat tggcacagga agagcagctg attttcattt gcggtcacta
     4681 tgaaggatat gatgagcgga ttaagacctt agtaacagat gaaatttctc tcggagatta
     4741 tgtcctgaca ggtggagagt tggcagctat gaccatgatt gatgctaccg ttcgcctgat
     4801 tccagaggtt attggcaagg aagtcagtca tacggatgat agtttttcat cagggctatt
     4861 ggaatatcct caatacaccc gaccatacga gtatcgtgga atggtagttc ctgatgtatt
     4921 aatgagcggt caccatgaaa atattcgtaa atggcgtttg gaagagagcc tacgcaaaac
     4981 ctatcaacgt cgtccagact tgttagaaaa ctacaacttt acagctgaag agttaactat
     5041 ttttgaaaaa atcaaggca
//
LOCUS       DASFQD010000142         4992 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.144, whole genome shotgun sequence.
ACCESSION   DASFQD010000142 DASFQD010000000
VERSION     DASFQD010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4992)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4992)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4992
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.144"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(63..608)
                     /locus_tag="U1021_002029"
     CDS             complement(63..608)
                     /locus_tag="U1021_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEM4712522.1"
                     /translation="MTNVLFLVGSLRDGSFNHQMAKKAEAFLADKAQVSYIDLAKIPL
                     FNQDIETPILPEIAELRAQVDAADAIWIFSPVYNYAIPGIVKNALDWLSRSLDLSNPK
                     GPSILQDKITTVSAVANSGHDHLFKDFQHLLPFIRTQIAGEFTGSTINPEAWGTGVLE
                     LSDETLAKLEQQAADLLAAIQ"
     gene            complement(671..1120)
                     /locus_tag="U1021_002030"
     CDS             complement(671..1120)
                     /locus_tag="U1021_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM4712523.1"
                     /translation="MRTVEQSLNENKHALHSLVVFRRAANTITKSELETIKKYGLTVC
                     QFGVMEALYNKGNLRIQDLIDKLLSTSGNMTVVIKNMIRDGYIYKTIDTNDRRASLIA
                     LTPLGRETIEKILPEHYDHVGEIFSVLSSEEQDQLAEILKKFKNQQT"
     gene            1334..1831
                     /locus_tag="U1021_002031"
     CDS             1334..1831
                     /locus_tag="U1021_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5590 domain-containing protein"
                     /protein_id="HEM4712524.1"
                     /translation="MEKKIFQLLEVLATKKGQLIAGSFILLSVMTFSIFVIWDLAAKP
                     FSDVQNHAISVARDYTDIEVVDDVSIYNGTETYFTLQGKTSQGEMIAVIIPEETNTVY
                     VYPMANGISKEEAQAIAKKNGAIQVERTILGLRDGKPIWEVKSGTAYYLVEFETGNFI
                     KREGL"
     gene            1828..3009
                     /locus_tag="U1021_002032"
     CDS             1828..3009
                     /locus_tag="U1021_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002267262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM4712525.1"
                     /translation="MSKLSRRVLEMEESVTLAAGARAKALKAEGRDILELTLGEPDFV
                     TPKNIQEAAIKSIEDGKASFYTVASGLPELKDAVNTYFEKFYGYSIERNQVILATGAK
                     FVLYAFFAAVINPGDEVLIPTPYWVSYADQIKMNEGVPVFVTATEEHNFKVTVDQLEA
                     ARTDKTKVLLLNSPSNPTGMIYSREELEAIGNWAVEHDILILADDIYGRLVYNGNTFT
                     PISSISESIRQQTIVVNGVAKAYAMTGWRVGFAVGNPEIIAAMSKIVGQTTSNLTTAA
                     QYAAIEAFTGPQDTVETMRQAFEERLNTIYPLLAEVPGFEVIKPEGAFYLFPNVKKAM
                     EMKGYTDVTEFTTAILEEVGVALVTGAGFGAPENIRLSYATDMDTLKEAVARLHIFMK
                     K"
     gene            3024..4370
                     /gene="asnS"
                     /locus_tag="U1021_002033"
     CDS             3024..4370
                     /gene="asnS"
                     /locus_tag="U1021_002033"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000038477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HEM4712526.1"
                     /translation="MSRKLITINQVKDYVGQEVTIGAWVANKSGKGKLAFLQLRDGTA
                     FFQAVAFKPNFIEKFGEEAGTEKFDVAKRLSQETSVYVTGIVKEDERSKFGYELDVTD
                     LEVIGESQDYPITPKEHGTDFLMDNRHLWLRSRKQVAIQQIRNAIIYATYEFFEKNGF
                     IKFDSPILSGNAAEDSTELFETDYFGQPAYLSQSGQLYLEAGAMALGRVFDFGPVFRA
                     EKSKTRRHLTEFWMMDAEYSFLSHEESLDLQEAYVKALIQGVIDRAPQALETLERDVD
                     ALKRYIAEPFKRVAYDDAITLLQEHEADEDTDYEHIEHGDDFGSPHETWISNYFGVPT
                     FVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDDYDALVAKMDEL
                     GMDKSEYEFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRMLHRLHP"
     gene            4474..>4992
                     /locus_tag="U1021_002034"
     CDS             4474..>4992
                     /locus_tag="U1021_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM4712527.1"
                     /translation="MKQESLGKEIIRLALPATVENIFQTLVGFVDTLLIAQLGLVAVT
                     AVGLANTILNVYLAVYMALGVGSTALIARSIGAGDRESLTFHVRQALVLSVGVGMLFG
                     LLSLVFGRQMLVLMGADAESLTGAQAFFYWVGGLTILQALMTILGTILRASGDTVSPM
                     KMSLLTNGFNLVL"
BASE COUNT         1390 a          975 c         1173 g         1454 t
ORIGIN      
        1 ttgagtatga aatgctctca aaatattaat caaaaaaaaa acagaaattc tggttttttt
       61 gattattgaa ttgctgccaa caggtcagct gcctgttgct cgagttttgc tagagtttcg
      121 tcagataact ctaacacacc tgttccccat gcttctggat tgatggttga acctgtaaat
      181 tcaccagcaa tctgagtacg gataaatgga agaaggtgtt ggaagtcttt gaataggtgg
      241 tcgtgaccac tgtttgcgac tgcagagaca gttgtgattt tatcttgtag gatagatggt
      301 ccttttggat tggataaatc gagcgaacga ctgagccaat cgagagcatt ttttacgatg
      361 cctgggattg catagttata tactggtgag aaaatccaga tagcatccgc agcgtctact
      421 tgtgcacgta gctcagcgat ttcaggaagg ataggtgtct cgatgtcttg gttgaatagg
      481 ggaatttttg caagatcaat gtaagatact tgagccttat cagccaagaa cgcttcagct
      541 tttttggcca tttgatggtt aaaagaaccg tcacgtagtg aaccaactaa aaacaatacg
      601 tttgtcatga tggcctcctt ttcataaaaa cataaattta gtatatcgta tttgtctttt
      661 gttggcaatc ctaggtctgc tgattcttga attttttaag tatctcggct aattggtctt
      721 gttcttctga actaaggaca gaaaaaatct ctccaacgtg atcataatgc tctggaagga
      781 ttttttcaat ggtttcgcgt ccaagtggag tgagagcaat caaggaagca cgacggtcat
      841 ttgtatcgat agtcttgtag atataaccat ctcgaatcat gttttttata acgacagtca
      901 tgttgccaga tgtacttaat aatttatcaa ttaagtcttg aatccgcaga tttcctttgt
      961 tgtagagtgc ctccatcact ccaaactgac aaactgtcag tccgtatttt ttgattgttt
     1021 ctaattctga ttttgtgata gtattagctg ctctgcgaaa gacgactaga ctgtgaagtg
     1081 catgcttgtt ctcgtttaaa gattgttcaa cagttctcat gagaatattt tagcaataaa
     1141 tagttcggtt atcaagcaaa aaaagttaaa tcctatattc ataggtaaag tactttatat
     1201 agcatggagg agctgaactg tgggtcccag ttcttatatt cgttctctgt ctgaaggaga
     1261 atgaaagttt attcacaatt caattacgga aaaaatggaa atatgcttta acttgtagta
     1321 taataggact actatggaaa aaaagatttt tcaacttttg gaagtattgg caacgaagaa
     1381 gggacagctg atagctggtt cctttatact ccttagtgtc atgacttttt cgatattcgt
     1441 tatttgggac cttgcagcta agcctttttc tgatgtgcag aatcacgcta tttctgtagc
     1501 tcgagactat acggatatag aggttgttga tgatgtctct atctacaacg ggacagaaac
     1561 atactttacc ctacaaggaa agacgagtca gggggaaatg attgcggtta tcattcctga
     1621 agagacaaat actgtgtacg tttatccaat ggcgaatggt atttctaagg aagaagcgca
     1681 agctattgcc aagaaaaacg gtgcaatcca agtagagcga actattctag gtttaaggga
     1741 tggcaaacct atttgggaag tcaaatcagg cactgcctac tatttagttg aatttgaaac
     1801 agggaacttt atcaaacggg agggcttatg agcaagttat caagacgagt cttagagatg
     1861 gaagaaagtg taactctggc agcaggtgcg cgtgcaaaag ccttgaaggc ggaaggacgt
     1921 gatattttag agctgacctt gggtgagcca gacttcgtca caccgaaaaa tattcaagaa
     1981 gctgctatta agtctatcga agatggtaag gcgagttttt atacggtagc ttcagggctt
     2041 cctgagttga aggatgcggt caatacctac tttgagaagt tctatggcta ctctatcgaa
     2101 cgcaatcaag tcattcttgc gacaggtgct aagtttgttc tttatgcctt ctttgcggca
     2161 gtcatcaatc ctggcgatga ggttctgatt cccacacctt actgggtttc ctatgccgac
     2221 cagattaaga tgaacgaagg cgtgccagtc tttgtcactg ccacagaaga gcataatttc
     2281 aaggtaacgg ttgaccagtt ggaagcggct cggacagaca agaccaaggt gctcctgctc
     2341 aacagcccgt ccaacccgac tggcatgata tacagtcgtg aagaattgga agctattgga
     2401 aactgggctg tggaacacga tattctcatc ttggcagacg atatttacgg tcgtttggtc
     2461 tataatggaa ataccttcac accgatttca agcatttcag agagcattcg ccagcagact
     2521 attgtggtca atggggtggc caaggcctat gccatgacag gttggcgggt tggatttgct
     2581 gttggtaatc ctgaaatcat tgcagccatg agtaagattg tcggacaaac gacgtcaaac
     2641 ttaacaaccg ctgctcagta tgcggccatt gaagccttta caggtccgca agatacagta
     2701 gaaaccatgc gtcaggcctt tgaagagcga ctcaatacca tttatccctt gctggcagaa
     2761 gtaccaggtt ttgaggttat caagccagaa ggagccttct atctcttccc aaatgtcaaa
     2821 aaggccatgg aaatgaaggg ttatacagat gtgaccgaat ttaccactgc tatcttggaa
     2881 gaagtaggag tagccttggt gacaggtgca ggttttggtg ctcctgaaaa tatccgcctc
     2941 agctatgcga cagatatgga cacgctcaaa gaagcagtgg ctcgactaca catatttatg
     3001 aaaaaataaa aagaggaaaa ataatgtcta gaaaattgat taccatcaac caagtaaaag
     3061 attatgtcgg tcaagaagtg accatcggtg cctgggttgc caacaagtca ggcaagggca
     3121 agttagcctt cctgcaattg cgtgacggaa cagccttttt ccaagcagtt gccttcaagc
     3181 caaacttcat cgaaaaattc ggtgaagaag ctggtactga gaagttcgat gtagcaaaac
     3241 gtctcagtca agaaacgtct gtctatgtga cagggattgt caaggaagac gagcgttcta
     3301 agtttggtta tgagctagat gtgacagacc ttgaagtgat cggtgagtca caagattacc
     3361 caatcacacc aaaagaacac ggtacggact tccttatgga caaccgccac ctctggttgc
     3421 gttctcgtaa acaggtcgct atccagcaaa tccgtaacgc catcatctat gcgacttatg
     3481 aattctttga aaagaatggc tttatcaagt ttgatagccc aatcttgtct ggaaatgcgg
     3541 cagaagattc aacagaattg ttcgaaacag actactttgg tcaaccagct tatctcagtc
     3601 aatcaggtca gctttaccta gaagctggtg ctatggctct tggtcgtgtt ttcgacttcg
     3661 gtcctgtttt ccgtgcggaa aaatcaaaaa ctcgccgcca cttgactgag ttctggatga
     3721 tggatgccga gtattcattc ctcagccatg aagagtcact tgacttgcaa gaagcttatg
     3781 tcaaagcctt gattcaaggt gttatcgacc gtgctccgca agccttggaa actctggagc
     3841 gtgatgtgga tgctctcaaa cgctacattg cggagccatt caaacgtgtg gcttatgatg
     3901 atgccattac ccttcttcaa gagcatgaag cggatgaaga tacagactac gaacacatcg
     3961 agcatggtga tgactttggc tcaccacatg aaacttggat ttcaaactac tttggtgtac
     4021 cgactttcgt tgttaactat ccagcaagct tcaaggcctt ctacatgaag ccagttccag
     4081 gtaatccaga gcgcgtgctt tgtgcggacc tcttggctcc agaaggctac ggtgaaatca
     4141 tcggtggttc tatgcgtgag gacgattacg atgccttggt agccaagatg gacgagctcg
     4201 gcatggacaa gtcagagtac gaattctacc ttgaccttcg taaatacggt tctgtaccac
     4261 acggtggttt cggtatcggt atcgagcgta tggtaacctt cgtcgctggt acaaaacaca
     4321 tccgtgaagc cattccgttc ccgagaatgt tgcatcgctt gcatccataa gcaaatcaat
     4381 agatatacaa acagactaca catgtggtct gttttcttgc tttttcactg agttttattt
     4441 ataattattc taaataaaat cgtggagagg aaaatgaagc aagaaagttt aggaaaagaa
     4501 attattcgtt tggccttgcc tgctacggtg gaaaatatct ttcagacctt agttggtttt
     4561 gtggataccc tcttgattgc acagctgggg ctggtagcgg tgacggcagt tggtcttgcc
     4621 aatacgattt tgaatgtcta tttggcggtc tatatggctt tgggagttgg gtcaacagct
     4681 ttaattgctc ggtctattgg cgcaggagat agggaatctc ttacctttca tgtccgtcaa
     4741 gccttagtac tttcagtagg tgtaggtatg ctatttggtt tactatccct tgttttcggg
     4801 aggcagatgc tggtcttaat gggagcagat gcggagagtt tgactggcgc ccaggcattt
     4861 ttttactggg ttggtggttt gactatttta caagctctga tgaccatttt gggaacaatc
     4921 ctgcgggcat ctggtgatac agtatctcct atgaaaatga gcttactgac caatggtttt
     4981 aatcttgtct tg
//
LOCUS       DASFQD010000143         4890 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.145, whole genome shotgun sequence.
ACCESSION   DASFQD010000143 DASFQD010000000
VERSION     DASFQD010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4890
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.145"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(75..2030)
                     /locus_tag="U1021_002035"
     CDS             complement(75..2030)
                     /locus_tag="U1021_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM4712528.1"
                     /translation="MKIQDVLRKDVMLLDLQATSKEAVIDEMIASLVDKGYVTDFDVF
                     KTGIMNREAQTTTGLGDGIAMPHAKNAAVKEATVLFAKSNKGVDYASLDGQPTDLFFM
                     IAAPEGANDTHLAALAELSKYLMKPGFADKLRGVSSPEEVISVFDKAEAADKAAEEVV
                     AAPSGDRPFIVAVTACTTGIAHTYMAEEALKKQAAEMGVDIKVETNGASGVGNKLTAE
                     DIKNAAGVIIAADKAVDMPRFNGKPLVSRPVAAGIKQPEELINLILDGKASAYTASEG
                     ATTVESSEKLSLFKAFYKHLMSGVSQMLPFVIGGGILIALAFLFDGALGVPQDSLGSL
                     GSYHEIAAMFMKIGGAAFGFMLPLLAGYIAYSIAEKPGLVAGFVAGAIASSGLAFGKI
                     PYAAGGEETLALAGVSSGFLGALVGGFLAGGVVLVLRKALRNLPKSLQGLNAILLLPL
                     LGTAITGFLMFFVNIPMAAINTGMNNFLAGLEGSSAILLGLVLGGMMAVDMGGPVNKA
                     AYVFGTGTLAATVADGGSVAMAAVMAGGMVPPLAVFVATLLFKDKFTQEERNSGLTNI
                     VMGLSFITEGAIPFGAADPARAIPSFIAGSALAGALVGLSGIQLMAPHGGIFVIALTS
                     NPLLYIAYVLIGAVVSSVLYGALRKAK"
     gene            complement(2027..2938)
                     /gene="pfkB"
                     /locus_tag="U1021_002036"
     CDS             complement(2027..2938)
                     /gene="pfkB"
                     /locus_tag="U1021_002036"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019323947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HEM4712529.1"
                     /translation="MIYTVTLNPAIDYIVRLDRVETGSVNRMESDDKYAGGKGINVSR
                     VLKRLGYPNTATGFLGGFTGQFIKDGLIAEGIDTDFVQVDQDTRINVKIKADQETEIN
                     GLGPIVTDTQLAELEMVLAGLIKEDTVVFAGSAPASLGNEVYNRLIPVAKKAGAQVVC
                     DFEGQTLLDSLAHQPLLVKPNNHELEAIFNVELNGIADIETYAKKILEMGAQNVIISM
                     AGDGALLVTPAATYFAKPIKGTVKNSVGAGDSMVAGFTGEYVRSQDPIEALKWGVACG
                     TATAFSDDLASIEFIKETYEKVEVETL"
     gene            complement(2935..3684)
                     /locus_tag="U1021_002037"
     CDS             complement(2935..3684)
                     /locus_tag="U1021_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM4712530.1"
                     /translation="MNILKSERKQIILERIHSQQFVRLEELIEVLDTSESTVRRDLDE
                     LENEGKLRRVHGGAEAPGNLQLEESILEKSVKNVQEKREIAERAAQQIVNGDVIFLDA
                     GTTTGVLIDYLQQENLTVVTNSIHHAVRLVERKIKTIIIGGFVKQSTDASVGAVALEQ
                     IRQLNFDKAFLGMNGIDKNYFTTPDIEEATIKRTIIDNAKESYVLADASKIGQFSFVK
                     VAAIEKSNIICQSSESSLLDIIKEKTRVIEV"
     gene            complement(3788..4843)
                     /locus_tag="U1021_002038"
     CDS             complement(3788..4843)
                     /locus_tag="U1021_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate aminotransferase family
                     protein"
                     /protein_id="HEM4712531.1"
                     /translation="MKRKVFEHYQPYKIKQKARFDLGNNENRIIDWAFLPQETLENLD
                     VNQLSFYGDNTYSELIEKYAAYLGVNPKQVTVGVGSDHLIHMIVSTFMEKDDTFLTVN
                     PDFFMYETYNHMHGSRFETIDLEAKNDTLVLPVEKLLARAEEVKAKIIMLSNPNNPSS
                     VAHSLEDLEKLAISFKGLLVVDEAYIEFANVESFISRLQHFDNVLVLRTLSKAFGLAG
                     LRVGFAVGSEELIYELDKVIPPFSLSNLTAKMAAVALNYTDKVLETVGVIQNLREEMI
                     LFLQGLDNCQVLPSQASFVTFKAPWAEEFYQQALAQDWNFKYYPTGKLGGHIRLSIGR
                     PEEMDMMKKMIEKLVEA"
BASE COUNT         1398 a         1147 c          927 g         1418 t
ORIGIN      
        1 tgcagttttc tcaaagtaac ttctggaagg acgggaacta gaacttacct tgagaattta
       61 cctttcaatt aaaattattt agctttacga agtgctccgt aaaggacact tgatacaacc
      121 gcaccgatca aaacataggc gatgtaaagc aatggattag atgtcaaagc gataacgaag
      181 ataccaccgt gaggagccat caattggatg cctgacaaac caaccaaggc acctgcaagg
      241 gcagaaccag cgataaagct tgggattgca cgagctgggt cagcagcacc aaacggaatc
      301 gcaccttcag tgatgaatga aagccccata acaatgtttg tcaaacctga gttacgctct
      361 tcttgtgtga atttgtcttt gaaaagaagg gttgcaacga atactgccaa cggtggaacc
      421 ataccacctg ccattaccgc tgccatggca acagaaccac catctgcaac agtcgctgca
      481 agtgtacctg taccgaagac ataagctgcc ttgttgactg gaccacccat atcgactgcc
      541 atcataccac cgaggacaag gccgaggaga atagcagagc taccttcaag acctgcaagg
      601 aagttattca tgcctgtgtt gatagctgcc attgggatgt taacgaagaa catcaagaaa
      661 ccagtgattg ctgttcccaa aagtggcaag agcaagatag cgttcaaacc ttgaagtgat
      721 tttggaaggt tgcgcaaagc tttgcgaaga acgagcacta caccaccagc aaggaaacca
      781 ccaacaaggg cacccaagaa accagatgat acacctgcaa gagcaagcgt ttcttcacca
      841 ccagctgcgt aaggaatttt accgaacgca agaccgctac tagcaattgc accagctacg
      901 aaacctgcaa ccaaacctgg tttttcagcg attgagtaag caatgtaacc tgctagaagt
      961 ggcaacatga agccgaaggc tgctccaccg atcttcatga acatagctgc gatttcatgg
     1021 tatgaaccaa gactaccaag gctgtcttgt ggcacaccta gagctccatc gaataggaag
     1081 gcaagggcaa tcaagatacc gccaccgata acgaatggca acatttgaga cacaccactc
     1141 atcaagtgtt tatagaacgc tttgaaaaga ctgagttttt ctgaagattc cacagtagtt
     1201 gctccttctg acgctgtgta ggctgatgct ttaccatcca agataaggtt aattaattct
     1261 tctggttgtt tgattccagc tgcaactgga cgagatacca aaggtttgcc attgaagcga
     1321 ggcatatcaa cagccttatc tgctgcgatg ataacacctg ctgcattctt aatgtcttca
     1381 gcggttagtt tgtttccaac acctgaagca ccgttggttt caaccttgat gtcaacaccc
     1441 atctcagcag cttgtttctt aagtgcttct tctgccatgt aagtgtgggc aatacctgtt
     1501 gtacatgctg taacagcaac gataaatgga cggtcaccac ttggtgctgc aactacttct
     1561 tcagcagcct tatctgctgc ttcagctttg tcaaagactg aaatgacttc ttctgggcta
     1621 gaaacaccac gaagcttgtc agcaaatcca ggcttcatca agtatttaga caattcagca
     1681 agggcagcca agtgtgtatc gtttgcacct tctggagctg caatcatgaa gaacaaatca
     1741 gttggttgac catcaagact tgcgtagtcg acacccttgt ttgattttgc aaagagaaca
     1801 gtcgcttctt ttacagccgc attcttagcg tgtggcattg cgataccgtc accaagacca
     1861 gtagttgttt gtgcttcacg gttcatgata cctgttttga atacgtcaaa atccgttaca
     1921 taacctttat caaccaaact agcaatcatt tcatcaataa ctgcttcctt gcttgtcgct
     1981 tgcaaatcaa gcaacatgac atcttttctc aaaacgtctt gaattttcat agtgtttcta
     2041 cctcaacttt ttcataagtt tccttaataa attcgatact tgccaaatca tctgaaaagg
     2101 ctgttgccgt accgcaagca actccccatt tgagggcttc gattgggtct tgtgagcgaa
     2161 cgtattcgcc agtgaatcct gccaccatgg agtctccagc tccgacagag tttttcactg
     2221 tacccttgat tggtttggca aagtaagtag ctgctggagt gaccaacaaa gccccatccc
     2281 ctgccatgga aatgataaca ttctgagcgc ccatttctaa gattttctta gcataggtct
     2341 cgatgtctgc aatgccattc aattcgacat tgaagattgc ttcaagttca tggttgtttg
     2401 gcttgaccaa tagtggctgg tgtgctagtg agtcaagaag tgtttgacct tcaaagtcac
     2461 agaccacttg cgctcctgct tttttagcca caggaatcag cctattatag acttcatttc
     2521 caagactagc tggagcagac ccagcaaaga caacggtgtc ttctttgatc aatcctgcta
     2581 agaccatttc taattcggcc aactgtgtat ctgtcacaat cggacccaaa ccgttgattt
     2641 ccgtttcttg gtcagctttg attttcacgt taatacgtgt atcttgatca acctgaacaa
     2701 aatcagtatc aattccttcg gcaatcaatc catctttgat gaactgacct gtgaatcccc
     2761 caaggaaacc cgttgctgta ttcggatagc ccaagcgttt caaaacacgg ctaacgttaa
     2821 ttcccttacc gccggcatac ttatcgtcgc tctccatacg attgacactg cctgtttcaa
     2881 ctctatcaag tcgaacgata tagtcaatcg ctggattgag cgtaactgta taaatcatac
     2941 ctcgattacc ctcgttttct cttttatgat gtccaacaaa ctgctttctg aagattggca
     3001 gataatgttg gatttttcga ttgccgcaac tttaacaaag gagaattgac caattttaga
     3061 agcatctgcc aaaacatagc tttctttagc attgtctatg atagtgcgtt tgatggtcgc
     3121 ttcttcaata tctggcgttg taaaatagtt tttatcaata ccattcatcc ccagaaatgc
     3181 cttatcaaaa ttgagttgtc gaatttgttc caatgccact gctccaacgg aggcatctgt
     3241 tgattgctta acaaaaccac ctataatgat tgtttttatc ttgcgttcaa ccagcctcac
     3301 tgcgtggtga atagaattgg taacgactgt cagattttcc tgctgaagat aatcaatcag
     3361 tacaccggtt gttgtacctg catctaaaaa aattacgtct ccgttaacaa tttgttgagc
     3421 agctctttcc gcaatctctc gtttttcttg aacgtttttg acagattttt ctagaataga
     3481 ctcttcgagt tgcaaattcc ctggcgcttc agcaccgccg tgtacacgac gaagcttacc
     3541 ttcgttttcc aactcgtcca aatccctacg tacagtagac tcagatgtat caagaacttc
     3601 gattaattcc tctagccgaa caaactgttg agagtgtatt cgctccaata taatctgttt
     3661 tcgttctgat ttgagtatgt tcaacacctc ctgcaatcgt ttacaaaaat cattatacac
     3721 gattttctgc cattgtcaat cattttctat cattttcttt caaaaaaaca aaaaaactag
     3781 cagaaatcta cgcttccact agtttctcaa tcattttttt catcatgtcc atttcttctg
     3841 gacggccaat agataggcgg atatgccccc ctaatttacc tgttggataa tatttgaaat
     3901 tccaatcctg tgccaaggct tgctgataaa attcttctgc ccacggtgct ttaaacgtta
     3961 caaaactagc ctgactaggt agaacttgac agttatctaa cccttgcaag aataaaatca
     4021 tttcttctcg caaattctga attactccca ctgtttctaa aaccttgtct gtataattca
     4081 atgcaacggc tgccattttt gcagtcaagt ttgacaagct gaatggggga atgaccttgt
     4141 ccaattcata aattaactct tcgcttccta ccgcaaagcc aactcgtaaa cctgcaagtc
     4201 caaaagcctt tgataaggtc cgtaaaacta aaacattgtc aaagtgttgc agacgactga
     4261 tgaagctttc gacatttgca aattcaatgt aagcctcatc tacaacgagt agccctttaa
     4321 aagaaatagc caatttctcc aaatcttcta gtgaatgagc tactgaagaa ggattgttag
     4381 gattggaaag catgattatc tttgccttca cctcctctgc acgcgccaac aatttctcta
     4441 ctggcaggac gagcgtatcg ttttttgctt ccaaatcaat ggtttcaaaa cggctaccat
     4501 gcatgtgatt ataggtttca tacatgaaga agtctggatt gactgtcaaa aaagtatcat
     4561 ccttttccat aaaggtggaa acaatcatgt gaataaggtg atcagagccc acacctaccg
     4621 tcacttgttt gggattcact ccaagatagg ccgcatattt ctcaatcagt tcggagtaag
     4681 tgttatcacc ataaaaactt aattgattga catccaaatt ttccaaggtc tcttgtggca
     4741 aaaaagccca atcaatgata cgattttcgt tatttcctaa atcaaatctt gccttttgtt
     4801 tgattttata aggttggtaa tgttcaaata ccttgcgttt catcatttct ccttctagca
     4861 agaaaaacac agtctaatca actgtgtctt
//
LOCUS       DASFQD010000144         4880 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.146, whole genome shotgun sequence.
ACCESSION   DASFQD010000144 DASFQD010000000
VERSION     DASFQD010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4880
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.146"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(100..732)
                     /locus_tag="U1021_002039"
     CDS             complement(100..732)
                     /locus_tag="U1021_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712532.1"
                     /translation="MFSIQSIQKKFGKRSLFSDVTLDLQAGKVYALIGASGSGKTTLL
                     NILAKLESYDAGDILYKGKDLKKLKPHLFFREELGYLFQNFGLLESQTIRENLDLGLI
                     GQKLSKDERKLRQEAALDAVGLSYLDLSQPIYELSGGEAQRVALAKVILKNPPLILAD
                     EPTAALDPKSSQEIMDILLSLKSPDRLIVIATHNPLIWERADLIIKMEDL"
     gene            complement(734..2716)
                     /locus_tag="U1021_002040"
     CDS             complement(734..2716)
                     /locus_tag="U1021_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1430 domain-containing protein"
                     /protein_id="HEM4712533.1"
                     /translation="MKGKFVLVSTIILAVFMIWLGVSQKETMLVHYYPSVTSLSVSED
                     VTYSDVRQRLEEYSQQTDSVIARRVIEPSTSGGRTFSYDNFSQSSLPRGLEEFQASEK
                     VESALLTKYFIFQGKATVEELRSLLVSLGFDEVQIRKPSTIATLLAFLTQGGQFLAVL
                     VFLITYMALVVVANVRQLRTAGIRLIAGDSRWHLFLLSLQENAKEIALTIPFAVLPAV
                     GLAYLIGLDSYSVYYLVAALVGYHFLLGLIALFFAATFTLAIRIYHFLPLLKGKMPLQ
                     GILTIMVMGQMLALLVVSLGMAQTVYYSGIWQEYQAGARQWEKEEDYYSLAWNIAADG
                     HSGLNSPENWYPLLKQALEKDGALFVKSNLNAYLMGSQLEDGTSLDSYHPAGNTLYVS
                     PNYLQIQDVDLSDEALPSLQEGEFQLLLPEKLRPESDIYLHLYQDYINRMVRPANQAS
                     SATIKGKLAYLKDGQKQFIYNHRSSQHVQYLTDPILVVLAPSSLGKESADFWLNEVDS
                     SILFKNRDKLLRELKARNLFQFVNEVRSSSSLFTELLDRIRIETISTSMGAILGIVTS
                     IILFNTMNLLYFEEFKRDIFIKEIAGMDFLGIHKKYLTFQLLSLLLALGASMVVTGHM
                     FISSISFALFMVNALCLLRWQARKDGTWNIRILKGA"
     gene            complement(2736..4720)
                     /locus_tag="U1021_002041"
                     /pseudo
     CDS             complement(2736..4720)
                     /locus_tag="U1021_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774933.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1430 domain-containing protein"
BASE COUNT         1500 a         1105 c          859 g         1416 t
ORIGIN      
        1 tcttgtttca aggtaacagg ctgaaaaggt ccaccggagc ttttcactca tcaaggctct
       61 tgacaacgga taattttgat tttcaaagag tatgaatttt tacaagtctt ccatttttat
      121 gataaggtct gctcgctccc aaatcaaagg attatgggtc gcaatcacaa ttagccgatc
      181 tgggctcttc aaggataaca aaatatccat aatttcttgg gagctcttag gatctaaggc
      241 agccgtcggc tcatctgcta aaatcaatgg aggatttttc aggatgactt tagcaagtgc
      301 tacccgctga gcttcccctc ctgagagttc atagataggc tgagacaggt ccagataaga
      361 cagaccaact gcatcaagtg ccgcttcctg cctcaatttc ctttcgtctt tggacaattt
      421 ctgaccaatc agtcccaaat ccagattttc tctgattgtc tgactttcta aaagaccaaa
      481 attctgaaag agatagccta attcctccct aaaaaagaga tggggcttca actttttcaa
      541 atccttcccc ttgtagagaa tgtcacctgc atcataggac tccaacttgg ctaaaatatt
      601 cagcaaggtc gtttttccgc taccactggc acctatcaag gcatagacct ttccagcctg
      661 caagtctagc gttacatcag aaaacaaact gcgtttccca aatttctttt gaattgattg
      721 gatagaaaac atactaggct cctttcaaaa tacggatatt ccaagttccg tctttcctcg
      781 cctgccacct caataaacag agggcattga ccataaacaa ggcaaaactg atactactta
      841 tgaacatgtg acctgtcact accatgcttg ctccaagagc caacaagagg gaaagcagtt
      901 ggaacgttag gtatttctta tggattccca agaaatccat ccctgcaatt tctttgataa
      961 aaatatcacg tttaaactct tcgaagtata atagattcat ggtattaaac aggataattg
     1021 atgtcacaat ccctaaaata gcacccatag atgttgaaat ggtctctatc cgaatacggt
     1081 ctaaaagttc tgtaaagagg gaggaactac ttctcacttc attgacaaac tgaaacagat
     1141 ttcttgcctt caattcgcgc aaaagtttat ccctgttttt aaataaaata ctgctatcta
     1201 cttcattcag ccaaaagtca gcagattctt ttcccagact tgacggtgcc agcacaacta
     1261 aaatagggtc tgtcaggtat tgcacatgtt gactagaacg atgattgtag ataaattgct
     1321 tctgcccatc ttttaaatag gcaagttttc ccttgatggt agctgagctt gcttgattgg
     1381 caggtctaac catacgattg atatagtctt ggtaaagatg gagataaata tcgctttcag
     1441 ggcgcaattt ttcaggtaag agaagttgaa attctccttc ttgtagagaa ggtaatgctt
     1501 cgtccgacaa gtctacatcc tgtatctgca aataatttgg actaacgtag agggtgttgc
     1561 ctgctggatg gtagctatca aggcttgtcc catcttccag ttgggagccc attaaatagg
     1621 cattcaaatt acttttgaca aagagcgcgc cgtctttctc caaagcttgc tttagtaaag
     1681 ggtaccaatt ttcaggcgaa tttagtcctg agtgaccatc cgcagcaatg ttccaagcca
     1741 aactatagta gtcctcttct ttctcccact gccgggcacc cgcttggtat tcttgccaaa
     1801 tccctgaata atagacggtt tgagccatgc ccaatgacac caccagtaga gccagcattt
     1861 gccccataac cataatggtc aggattcctt gcaggggcat tttccctttt aacaagggta
     1921 aaaagtgata gattcgaatg gccaaggtaa atgtagcagc gaaaaaaagg gcaatcaaac
     1981 caagcaagaa atgatagcct actagagctg cgaccagata gtagacagaa tagctatcta
     2041 atccaatgag gtaggccagt ccaactgctg gaagaaccgc aaatgggata gttagagcta
     2101 tctctttcgc attttcctgt agagatagta gaaataaatg ccaacgtgaa tctcctgcga
     2161 tcaaacggat acctgctgtg cgcaattgcc ttacattggc aaccactacc aaagccatat
     2221 aggtaataag aaagaccagt acggctaaga attgaccacc ttgtgtcaga aatgcgagta
     2281 aagtagcaat agtcgaaggc ttccgaatct gaacctcgtc aaatccaagc gaaacaagaa
     2341 gagaccgaag ctcctctact gtcgctttcc cttggaaaat aaaatatttg gttaaaagcg
     2401 cagactccac cttttctgat gcctgaaatt cctccagtcc tcttggtaag gaagactgac
     2461 taaaattatc ataagaaaag gtacgtccac ctgatgtact tggctcaatc acccgcctgg
     2521 caatcacact atccgtctgt tgagaatatt cctctaatcg ttgtcttaca tctgagtaag
     2581 tcacgtcctc agataccgac aagctggtca cagaaggata ataatgaact agcatagtct
     2641 ccttttggct gacgcccaac caaatcataa agacggctag aatgatcgtc gatacaagta
     2701 caaattttcc tttcattcta acttcacctc attaactatc tgccatttaa tacactcaac
     2761 tggatttttt ctgccttttt cgcttgtttg ttcagtaaca tccaactatt tatcaacaga
     2821 gccacaacta ctcctaggct aacaataact gactttgtca taaacattgc caaacccatc
     2881 ccaacaagag cggagccgac ttgttctcct agataagaac catgcaattc gataaaacgc
     2941 atccctgcta tccgcttgat ggctatttct cttttgaagg tctcaaagta tagaagattc
     3001 atcgtattga acaatagtat ggaagtgaat attccaagga ttgtcggaga tagggtcata
     3061 agaatttcaa gttgaacatt ttttctcagg gtgttgtact gttgcctgct agataacaag
     3121 ctacctattg tgtttcgtaa attgtatttc tccaacagct gttccagcat ctctttatct
     3181 ttgaaaaata caaaatctgg taaggcattt tcccaaaaat aggacgtttc ttcaaaactt
     3241 tcaggtgata gaacaacaat caacggagcc tgtaaaaatt gctcataatt tatcggagta
     3301 tgattgtaaa tgaaccatcg cttctcgtct gaaatgtaat aaacgtttga atacaaactt
     3361 atggattttt ctccatccgc aagcaatttt cctaccatgt cctcaaaata cgcttggtaa
     3421 acactcgcat cattttgcaa actctttggt aataataatg caatttctcc tttacctaat
     3481 tgctttatct cttccagctg attgaaatcg tacaggccac cttctgattg tatataattc
     3541 ggcgtcacat acagcaccct ttctagagga atttccttgc tggattcaat gatggtatgt
     3601 tcttttattg tgttatgccg taaatagtgc tggactaaca gtacattatt tttcgcatat
     3661 gattccaaaa ttacatgaga ccaagccatt ctttgttgct gggccatcgc ttcatcagct
     3721 atgaatgctt cacgattcaa agacagacta aaacatcttg tctttcttgc caagcctttt
     3781 ctcctatcgt tagtgtatgg agaactccaa catatgtcaa cgttcgacta acaccaatag
     3841 agatgataca aaccgctaaa cactgaccta ctagtaaaat agcaaaaatc gccttgagag
     3901 gtaaggcccc cttaattagc ttttgtaact gagaaatgtt taatgcaatc atgaatccaa
     3961 cacttgtcga taaagatagg aaaaaaagca aacaagcata aaaggcaata ccgattgcta
     4021 caaaacgata atataccatt ggccaaccca aaattaaaat agcaatcagt ccgaaaacaa
     4081 gcgctcctcc tgtagccaat gctatatctc ttccatccac tcttaaaaaa cgactagcaa
     4141 tctgccaact cctcacccct gaaagtatct ctatccctgc tgaccgcaag tagacaatct
     4201 gcccaactac tgtcaatgca agattggtga gtataaagat aataagccct aagcccggag
     4261 ctcctctacc aagaaataga cttaaactgt ttaatagggt cggtctataa atatagctat
     4321 ccaccaatcc cagtgactgt aagacgtttt ctaacgcttt gatgtccaga ttccctttta
     4381 caacatagta attttcagct aagttggcct gactagctac taacctatcc gctttgacca
     4441 agccctgtgg aagctccccc ttcccaaaaa catcataact ggtagtagtt cgcccactat
     4501 catctgtttc tgttattgtc ttagcaatta gactattttc cttttcagct aaatttgtca
     4561 gggcatccga cacttcttca taggtcactt cttcccctcg acttaatatg gaaaccgatg
     4621 gatagtaatg ataaattaaa gaatcgagtt gcagactcac taaccacata cagaagagac
     4681 agacgctaaa agtagataaa taggtaaata cttttttcat aacgaacccc atttgcacaa
     4741 aaaggaggtg gactccacaa cctccctatc attagaaccc gtaaccaaaa tcaacatgtt
     4801 ttcaaacgtt cgttgatata gctttttatt ttattttaac atattaacag tcgattttca
     4861 atctatttta attattttta
//
LOCUS       DASFQD010000145         4814 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.147, whole genome shotgun sequence.
ACCESSION   DASFQD010000145 DASFQD010000000
VERSION     DASFQD010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4814)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4814)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4814
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.147"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..2453)
                     /locus_tag="U1021_002042"
     CDS             complement(<1..2453)
                     /locus_tag="U1021_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEM4712534.1"
                     /translation="MGETMKKKIYWKDMRQSLLSSKGRFLSIFSLMMLGALALTGLKV
                     TAPNMEKTAQAYIADHRTMDLAVISGLGLSQADLDELETIEGATLEAGYFKDVVTNEG
                     QTAIRLFSAPKTLSTYKLVEGEMPSQKGQIALSASLKNRYKLDDTVQVTESDKDGKIL
                     TQTSFTLVGFVASAEIWDNETMGMAASGDGQLGGYGLVSQDTFKSEVYTIARIRYDDL
                     VDLPYYSQAYQDRLDQHQEDLEKLLANNDEQRLATIQSDGQTDISKGEEEIAQAQSQL
                     EQAESELETGEEQLATGRREFARGRAKVVQTEAELRAAQAQLLKNKFELEESKKELDG
                     RKAQLEQTASFLDGYQMELEMSAQQLEEAKQELDSQNAQLSQTASQISTGRASWFQAQ
                     QELDLEIANHLQEGQTLSDYPDLLARQEGLDVEKSRLDQMESAHEQANQAYLQGYDYY
                     QTKQNEYNSNLAQYQTWNQEYQAGLARYQAGLSQYEQGIAAYNKGVEDYEWGLSQLES
                     SNQLLRQEELRLEEADKELSQAQSQFSDKKAAADQEISQAQTEIAQAKSDLSKLEKAP
                     YQVYTRSSLPGGDGYTTYSNATRSIAAVGNVFPVVLYLVAALVTFTTMARFVDEERTQ
                     SGLFKALGYTNRQIMAKFILYGLAAGLVGTIVGIIAGNLLLSPLISDIITQTTVIGPA
                     KLHFYPLWTGLALLLSLVSSVLPAYLVARRELTEKPAQLLLPKPPVTGSSIWLEKWPA
                     IWSRLSFTHKVTARNIFRYKLRMLMTIFGVAGTVALLFGGLGIRSSISGVVQRQFGEL
                     IHYDMLVVENSRATEEELD"
     gene            complement(2453..3154)
                     /locus_tag="U1021_002043"
     CDS             complement(2453..3154)
                     /locus_tag="U1021_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712535.1"
                     /translation="MSYIQVKNSSKYYQMGDATIVANDSVSFEIEQGELVIILGSSGA
                     GKSTLLNILGGMDSNDEGEVWIDGVDIAKLSSHELTNYRRDDVGFVFQFYNLVANLTA
                     KENVELAAEIVKDALDAEEVLEQVGLGHRINNFPAQLSGGEQQRVAIARAVAKKPKIL
                     LCDEPTGALDYQTGKQVLQILQDMSRKQGATVIIVTHNSSLAPIADRVIRMRDARVHS
                     VELHAEPQDIASLEY"
     gene            complement(3243..3578)
                     /locus_tag="U1021_002044"
     CDS             complement(3243..3578)
                     /locus_tag="U1021_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase BlpT"
                     /protein_id="HEM4712536.1"
                     /translation="MEKTQIIQDVLALIQDLNQAFQADKVGTVDEQRLQHNLTETTRI
                     LSEAESVTNTELIAIEKFYRSTSFLVGLGDLRLSETSRQAWRAFDRYYYETIREELKL
                     YGGSAIAQV"
     gene            complement(3673..4158)
                     /gene="tpx"
                     /locus_tag="U1021_002045"
     CDS             complement(3673..4158)
                     /gene="tpx"
                     /locus_tag="U1021_002045"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002267998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HEM4712537.1"
                     /translation="MTTFIGKPVTLVGPQLRVGDTAPDFVLMANDLSLKSLKDFGKQT
                     KVISVVPSIDTGICDTQTRRFNQELADRDNTVVITISADLPFAQKRWCGAAGLEDAIT
                     LSDYYDHAFGKSYGVLMREWNLLARAVFVLNADNEITYIEYLDNVNEHPDYDAALEAV
                     K"
     gene            complement(4237..>4814)
                     /locus_tag="U1021_002046"
     CDS             complement(4237..>4814)
                     /locus_tag="U1021_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEM4712538.1"
                     /translation="LAVIAIADKVKETSRQAVQALQTMGLEVVMLTGDNEKTAQAIAK
                     EVGIEQVVSQVMPDDKAKQVKFLQEQGKTVAMVGDGINDAPALAQAHVGLAIGSGTDI
                     AIESADIVLMHSDILDVVKAVKLSQATMRTIKQNLFWAFAYNVIGIPIAMGLLHIFGG
                     PLLNPMFAGAAMALSSVSVVLNALRLTTYKL"
BASE COUNT         1244 a         1187 c         1006 g         1377 t
ORIGIN      
        1 ttatccaact cttcctcagt agctctacta ttttccacca ccaacatatc ataatggatt
       61 agctccccaa actgtcgttg gacaactcct gagatggagg aacggatacc cagtcctcca
      121 aaaagaaggg cgacggtccc tgctactcca aagatggtca taagcatacg aagcttgtag
      181 cggaagatat tgcgggctgt caccttatgg gtaaagctta gacgagacca gatagccggc
      241 catttttcaa gccaaatgct ggagcctgta accggtggct taggtaaaag tagctgagca
      301 ggtttttctg tcagctcccg acgagccacc aagtaagctg gcaggaccga ggaaaccaaa
      361 gataggagca aggctaaacc tgtccaaagg ggataaaaat gaagtttagc tggtccaatc
      421 acggttgtct gcgtaataat gtcggaaata agtggagaca agaggagatt acctgctatt
      481 ataccgacta ttgttcctac cagacctgcc gccaaaccat agagaatgaa cttagccata
      541 atctgtctat tcgtataacc aagggccttg aagagacctg actgtgttcg ctcttcatcg
      601 acaaaacggg ccatggtggt aaaagtcact agagctgcga caaggtagag aacaactggg
      661 aagacattgc ccactgcagc aatagaccta gtcgcattgc tataggtagt atagccatct
      721 ccacctggta ggcttgatcg agtatagacc tgatagggcg ctttttccag cttgcttaag
      781 tcggatttag cctgagcaat ctcggtttga gcttggctaa tttcttgatc ggccgcagct
      841 ttcttatcag aaaattggga ttgagcttga cttaactctt tatcagcctc ctccaaacgg
      901 agttcttcct gacggagcag ttgatttgaa gactctaact gactcagtcc ccattcatag
      961 tcttctactc ctttattgta ggctgcaatg ccttgttcat actgactcaa acctgcttga
     1021 taacgggcca aacctgcctg atattcttga ttccaagttt ggtactgggc tagattgcta
     1081 ttgtattcat tttgtttggt ttgatagtaa tcataacctt gtaaataggc ttggttggcc
     1141 tgctcatgtg cagattccat ttggtctaat cggcttttct caacatccaa accttcctgt
     1201 ctagccaaca agtcaggata gtctgagagg gtttgacctt cttgcaagtg attggcaatt
     1261 tcaaggtcta actcttgctg agcttgaaac caactagctc gccctgtgga aatctgagat
     1321 gcggtctgac tcagttgggc attttgggaa tccaattctt gcttggcctc ttctaactgc
     1381 tgggctgaca tttctaattc catctgatag ccgtctagaa acgaagcagt ctgttctaat
     1441 tgagccttac gcccgtccaa ttccttttta ctttcttcca attcaaactt attttttaat
     1501 agttgggctt gggcagctcg taattcagct tccgtttgga caaccttagc cctaccacgc
     1561 gcaaactctc tacgacctgt cgctaattgc tcctcccctg tttccagttc tgactcggcc
     1621 tgttcaagct gggactgagc ctgagcaatt tcctcttccc cttttgaaat atctgtctgt
     1681 ccatctgact gaatagttgc caatcgttgt tcatcattgt tagccaataa cttttctaag
     1741 tcttcttggt gctggtccaa cctgtcttga taggcctgac tgtaatatgg taaatcaacc
     1801 aaatcatcat agcgaatacg ggcaatagtg taaacttctg atttgaaggt atcctgacta
     1861 acaaggccat aaccacctaa ctgcccatca ccacttgcag ccatgcccat ggtttcattg
     1921 tcccaaattt ctgctgatgc gacaaagccc acaagagtaa aacttgtctg tgtcaagatt
     1981 tttccatcct tatcagactc cgtcacttga acagtatcgt ccaatttgta acgatttttt
     2041 aaagaagctg atagggctat ttgccccttt tggctgggca tttccccttc tactagctta
     2101 taggtcgata gggtcttggg agctgaaaac agccgaattg cagtctgtcc ttcattagta
     2161 accacatctt taaagtagcc cgcttcaaga gtagcacctt ctatcgtttc taattcgtca
     2221 aggtcagctt gactaagtcc cagacctgaa attactgcca aatccattgt cctatggtca
     2281 gcgatatagg cttgggccgt cttttccata ttgggagctg ttactttcag acctgtcaaa
     2341 gctagagctc ctagcatcat caggctaaaa atggacaaaa aacgcccctt ggaagaaagc
     2401 agagattgtc tcatatcctt ccagtagatt ttctttttca tagtttcacc cactaatatt
     2461 ctaggcttgc aatatcctgt ggttctgcgt gtaactcaac ggagtgtaca cgggcatccc
     2521 gcattcgaat cactctgtct gcaatagggg ctagggaact attgtgggtc acgataatca
     2581 ccgttgcccc ctgcttgcgg gacatatctt gtaggatttg taagacctgc ttacctgttt
     2641 ggtagtccag agcgccagtt ggttcatcgc aaagcaaaat tttaggcttt ttggcaacag
     2701 cacgggcaat ggccacccgt tgctgttcac cgcctgaaag ctgagcaggg aaattattga
     2761 tacgatggcc tagtccaact tgttccaaga cctcctcggc atccaaggca tccttgacga
     2821 tttccgcagc cagttccaca ttttccttgg cggtcagatt ggcaaccaag ttataaaatt
     2881 gaaagacaaa acctacatca tctctacgat aattggtcag ttcatgactt gaaagcttgg
     2941 cgatatccac accgtcaatc caaacctccc cctcatcgtt gctatccatg ccacctaaga
     3001 tattgagcag agtggatttg cccgcaccag atgaacccag aatgatgacc aactcaccct
     3061 gctcaatctc aaaggacacg ctgtcattgg ccacaatggt cgcatccccc atttgatagt
     3121 attttgacga attctttact tggatgtagg acatggcaca cctcgcttct tctcttccta
     3181 acaactgtat tcttactact tattatagca caaaagaggg ttttcaccct ctccttcatc
     3241 ttttacactt gggcaattgc agagccgcca tagagtttga gttcttctct gatcgtttcg
     3301 tagtaatatc ggtcaaatgc ccgccaagcc tgcctgctgg tttcactcaa tcgcaggtcg
     3361 cccagtccaa ccaaaaaact ggtcgaacga taaaatttct caatcgcaat cagttctgta
     3421 ttggtaacag actcggcctc cgacaatatg cgtgtcgtct ctgtcagatt atgttgcaat
     3481 cgctgctcat caactgttcc tactttatct gcttgaaagg cctgattcaa gtcttgaatg
     3541 agggccaaaa catcttgaat aatctgtgtc ttttccataa aagaccctcc ttgtttttga
     3601 taaatttagt atatcaaatt agacaaaaat attccatcaa aaaacgatgc ctgttccggc
     3661 accgttatat ctttatttaa cagcctccaa agccgcatca tagtctggat gttcgttgac
     3721 attgtccagg tattctatgt aggtaatttc attatcagca ttgaggacaa agactgcacg
     3781 cgccagcaaa ttccactctc gcatgagcac accataggat ttaccaaagg catggtcata
     3841 gtaatcagac aaggtgatgg catcctccaa acctgcagcg ccacaccagc gtttttgggc
     3901 aaagggcagg tcagctgaaa tggtgatgac aaccgtattg tcacgatcag ccagttcctg
     3961 attgaagcga cgggtctggg tatcacaaat ccctgtatca atagaaggca caacactgat
     4021 gaccttggtc tgcttgccaa agtctttcag acttttcaag ctcaagtcat tggccatgag
     4081 gacaaagtca ggagccgtgt ctcccactcg caactgcgga cctaccaagg tcaccggttt
     4141 tccaataaag gttgtcataa acatctccct tgcacttaat atatacattg taagcgttta
     4201 tgtaaaaaaa taccagtttt ttgactggta tttttgctat agtttgtagg ttgtcaaccg
     4261 caaagcgttc aagacgacgg acactgagct gagggccatg gctgcacctg caaacatagg
     4321 attgagcagg ggtccaccaa atatatgtaa cagacccatg gctattggaa taccaatcac
     4381 attgtaagca aaggcccaga agagattttg cttgatggtc ctcatggttg cctggctgag
     4441 tttgacagcc ttgaccacat ccaaaatgtc actatgcatg aggacaatgt cggcagactc
     4501 aatggcaata tcagtccctg aaccaatggc tagacccaca tgggcttgtg ctagagctgg
     4561 ggcatcgttg atgccatccc ccaccatggc aactgtcttg ccctgttctt gtaagaactt
     4621 gacttgtttg gccttgtcat ctggcatgac ctgactgacc acctgctcaa tgccgacttc
     4681 cttggcaatg gcctgggcag ttttttcatt atctcctgtc agcatgacaa cttctagtcc
     4741 catggtttgc agagcctgaa cagcctgacg gctggtctct tttactttat cagcaatggc
     4801 aatgactgct agta
//
LOCUS       DASFQD010000146         4710 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.148, whole genome shotgun sequence.
ACCESSION   DASFQD010000146 DASFQD010000000
VERSION     DASFQD010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4710)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4710)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4710
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.148"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(135..614)
                     /locus_tag="U1021_002047"
     CDS             complement(135..614)
                     /locus_tag="U1021_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HEM4712539.1"
                     /translation="MSIYDFTVQKQDGTDQSMAEYQGQVLLIVNTAPGCGLAPQYKEL
                     QELYDTYKDNGFVVLDFPCNQFLNQAPGSAEDINQICSLNYGTTFPRFAKIAVNGSEA
                     SPLYRYIKKEKSTLLGGRIEWNFTKFLVDRQGRVVKRYLPTTSPLKLKEDIELYLEK"
     gene            complement(628..1344)
                     /locus_tag="U1021_002048"
     CDS             complement(628..1344)
                     /locus_tag="U1021_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEM4712540.1"
                     /translation="MRLDKCLEKAKVGSRKQVKKLFKAQQIKINGQAAQSLSQIVDPE
                     LQTIQVSGKKVALEGSAYYLLHKPAGVVSAVTDQEHQTVIDLISPQDSREGLYPVGRL
                     DRDTEGLVLITNNGPLGYRMLHPSHHVDKVYYVEVNGCLAEDASKFFASGVTFLDGTR
                     CQPADLTVLEASLDHSRATIKLAEGKFHQVKKMFLAYGLKVTYLKRISFGGFELGDLE
                     RGAYRQLTPNEMEHLFTYFD"
     gene            1482..2438
                     /locus_tag="U1021_002049"
     CDS             1482..2438
                     /locus_tag="U1021_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000523788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEM4712541.1"
                     /translation="MGLLQDGKWVDQWYDTKSTGGKFVRSVTQFRNWITPDGQAGPTG
                     KGGFKAESGRYHLYISLACPWASRTLIMRKLKGLEDHISLSVVHPLMLENGWTFEDGP
                     GVIKDTLFNSDYLYQVYLKADPHYSGRVTVPVLWDKETNTIVSNESAEIMRMFNTAFN
                     DITGNQDDYYPADLQAEIDAMNDFVYPNFNNGVYKAGFSTSQAVYEKEVKNLFAALDK
                     LEEHLADKNYLVGNQLTEADIRLFTTLVRFDPVYFGHFKCNIKALVDYPNLWDYTKRI
                     YNHAGIAETVDFDHIKQHYYGSHKTINPTGIVPVGPDLDWTL"
     gene            complement(2668..3681)
                     /gene="argF"
                     /locus_tag="U1021_002050"
     CDS             complement(2668..3681)
                     /gene="argF"
                     /locus_tag="U1021_002050"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000195397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEM4712542.1"
                     /translation="MTNIFKGRSFLAEKDFSAAELEWLIDFSAHLKDLKNRNVPHKYL
                     EGKNIALLFEKTSTRTRAAFTVAANDLGAHPEYLGAKDIQLGKKESTEDTAKVLGRMF
                     DGIEFRGFSQEMVEELAEFSGVPVWNGLTDLWHPTQMLADFLTIKEEFGTLVGLTLVY
                     CGDGRNNVANSLLVTGALLGVNVHIFSPKELFPVQSILDLAQSFAAQSGASILLTEDA
                     DEAVQGADVLYTDVWVSMGEEDKFQERISLLQAFQVNMDLIQKANNDKLIFLHCLPAF
                     HDTHTSYGKEVAEKYGIQEMEVTDEVFRSTYARHFDQAENRLHTIKAVMAATLGDPFV
                     PRV"
     gene            complement(3697..4431)
                     /locus_tag="U1021_002051"
                     /pseudo
     CDS             complement(3697..4431)
                     /locus_tag="U1021_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941687.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
     gene            4513..>4710
                     /locus_tag="U1021_002052"
     CDS             4513..>4710
                     /locus_tag="U1021_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712543.1"
                     /translation="MLDQIKAHLLDSINDIVSTANQFLLHPKKDFSRKSQLTRNLDER
                     AAFIDMLKTSSFKQALVIMDRG"
BASE COUNT         1363 a         1050 c          925 g         1372 t
ORIGIN      
        1 taaaaaacct cctttttgtg cgccctaaat acaaaaacta ttcccgtttg gtcatgaact
       61 gctcagacga gaatagttcc tttaattgtt taaatgctta acttaatgac attgagataa
      121 ctccagcctt cttgttattt ttctaggtaa agttcaatat cctctttaag ttttaatgga
      181 ctagttgttg gtaaatatcg tttgaccacg cgcccttgtc tatccaccaa aaacttggta
      241 aaattccact caattcgacc tcctaataag gttgattttt ctttcttaat atagcgatat
      301 agcggactag cttcagatcc attcacagca attttagcaa aacgaggaaa agttgtacca
      361 taattcaagc tacagatctg attgatgtct tccgcagaac cgggagcctg atttaaaaat
      421 tgattacaag gaaaatctag cacgacaaaa ccgttgtctt tataagtatc atagagttct
      481 tgcaattcct tgtattgtgg tgccaatcca caacctggcg ctgtattgac tataagtaaa
      541 acttgtcctt gatactcagc catggactgg tctgtgccat cttgtttttg tactgtaaaa
      601 tcataaatgc tcattatata tcctcctcta gtcaaaataa gtgaataaat gttccatttc
      661 atttggagtg agttgtctgt atgcacctcg ttccaaatcc cccaactcaa aacctccaaa
      721 ggaaatccgc ttgagataag tgaccttgag accataggct agaaacattt tcttaacctg
      781 atgaaactta ccttctgcca gcttgatggt cgctctgcta tggtccaaag aagcctccaa
      841 gacagtcaaa tctgcaggct gacaccgtgt tccatccaag aaagtaacac ctgaggcaaa
      901 aaattttgaa gcatcctcag ccaagcatcc atttacctcc acatagtaga ccttgtccac
      961 atggtggctg ggatggagca tgcgataacc gagcggacca ttgttggtaa tgaggactag
     1021 gccttcggta tccctgtcca ggcgaccgac tgggtagaga ccttccctac tgtcttgcgg
     1081 agaaatcaag tcgatgactg tctgatgctc ctggtctgtc acggcagaaa cgactcctgc
     1141 tggtttatgg agcaaataat aggcagaacc ttctaaggca acttttttac ccgaaacttg
     1201 gatagtttgt aactctgggt caacaatctg gcttaggctt tgagctgctt gtccgttaat
     1261 cttgatttgc tgggctttga aaagtttttt aacttgctta cgcgagccaa ctttggcttt
     1321 ctctaaacat ttgtccaatc tcatgggact attgtatcac aaatcatata gcttgactct
     1381 ttttgaaaaa ggtttataat actagttagt gatatatttt ttacaaagga aatccaatca
     1441 tcctattgga tttcccattt tttcagtaag ggagaaaatt catgggactt ttacaagatg
     1501 gcaaatgggt ggatcaatgg tatgacacca agtcaacagg cggtaagttt gttcggagtg
     1561 tcacgcaatt tcgcaactgg attactccag atggacaggc aggtccaaca ggaaaaggcg
     1621 gtttcaaagc cgagtctggt cgctatcacc tctatatttc tctggcttgt ccttgggcta
     1681 gtcggacctt gattatgcga aaattgaagg gcttggaaga ccatatttcc ttgtctgtcg
     1741 ttcatcccct catgttggaa aatggctgga catttgaaga tggtcctggt gttatcaagg
     1801 ataccctctt taacagcgat tatctctatc aggtctattt gaaggctgat ccacactatt
     1861 ctggtcgggt gaccgtgcct gtcctttggg acaaagaaac aaataccatt gtcagcaacg
     1921 agtctgccga gattatgcgg atgttcaata ccgccttcaa tgacatcacg ggcaatcagg
     1981 atgattatta tccagcagac ttgcaggctg agattgatgc tatgaatgac tttgtctatc
     2041 caaacttcaa caacggtgtc tacaaggcag gtttttcaac cagtcaagca gtctatgaaa
     2101 aagaagtcaa aaatctcttt gctgccttgg ataaactaga agagcatttg gctgataaga
     2161 actatctggt tggcaaccag ctgacagagg ctgatattcg actctttacc actttggtgc
     2221 gtttcgaccc tgtgtacttt gggcatttca aatgcaatat caaggccttg gtggactatc
     2281 caaacttgtg ggattatacc aagcggattt acaaccatgc tggcattgca gaaacggttg
     2341 acttcgacca tatcaagcaa cattactatg gtagtcacaa gaccattaac ccaacaggca
     2401 ttgttcctgt cggacctgac ttggactgga ctttataagg aaaaagcact ctttttaagg
     2461 agtgcgcaga acgtagacaa actcctaaaa atataaaaaa tagaagaagt ttgcgaaaga
     2521 tagcaagtca ttaaactctt agaaatgttg atattccagt gtttctaaga gtttttaatt
     2581 ttcaacatta agaaaaaaga ttgaagaaaa ttatccaaaa tggacttttt cttcaatact
     2641 gagcactctt tttaaggagt gcgcttttta tactcggggt acaaatggat cacccagggt
     2701 tgctgccatc actgccttga tcgtatgtaa cctgttctct gcctgatcga aatgacgagc
     2761 ataggtgctt ctgaagactt catcggtcac ttccatttct tgaataccat atttttccgc
     2821 cacttccttg ccataactcg tatgggtatc atggaaggcc ggcagacaat ggaggaagat
     2881 gagcttgtca ttattagctt tttgaatcaa gtccatattc acctgaaagg cttgtaagag
     2941 ggaaatacgc tcttggaatt tatcttcctc ccccatagaa acccaaacat cggtatagag
     3001 gacatcagcc ccttgaaccg cctcgtccgc atcttcagtc aagagaatgc tggctcctga
     3061 ttgggcagca aaggactgag ccaagtctaa aatcgactgg actggaaaca attccttagg
     3121 agagaaaata tgaacattga cccccaagag tgcacctgtt actaataagg aattggctac
     3181 attatttcga ccatctccac aatacaccaa tgtcaagccc accaatgtgc caaattcctc
     3241 tttgatggtc aaaaagtcag ccagcatttg agttggatgc caaagatcgg tcaagccatt
     3301 ccaaacaggc acacctgaaa actcggccaa ttcttctacc atttcctgac taaaaccacg
     3361 aaattcaatc ccatcaaaca tccgtcctaa gaccttggca gtatcctctg tcgattcctt
     3421 cttgcccaat tgaatatctt tggctccaag gtattctgga tgagcaccca gatcattagc
     3481 ggctactgta aaagcagctc gagttcttgt tgatgtcttt tcaaaaagca aggcaatatt
     3541 cttcccttcc aagtacttat ggggaacatt gcgatttttc aagtctttca aatgagctga
     3601 aaaatcaatc aaccactcca attctgcagc agaaaaatcc ttttctgcca agaaacttct
     3661 tcctttaaaa atatttgtca ttttcattcg acctttctaa tctttttcca agtctgacat
     3721 gaccttctgt aaaatggtaa ttgcctggtc aatttcttca attgtgactg ttagcggggg
     3781 caacaaacgg ataacattgt tgccagctgt caatacaatc aaactcttct gacgcgtaga
     3841 tgtaactatc tgccctaaat cagcatcggt ttcgatacca accatcatac ccataccacg
     3901 gatttcctta acagttgaaa tggaagccag tttttcctca agttggctct gaaaataagc
     3961 cgacttgctt tgaacctcct tgagaaatgc tggcgtcaac aattccaaga cctgcttact
     4021 gctggaaagg gccagcttgt tgccaccaaa agttgtcccg tgactgcctg gcgaaaaagc
     4081 tgttcctaga ctagatttcc ctaacatggc tccgactggc agaccattag ccaagccttt
     4141 ggcaagagtg atgatatctg gctcaatctg gtactgttca aaggcaaaaa ggctgcccgt
     4201 ccgaccaatt cccgtctgta cctcatctac aatcagtaga atatttgaag actggcaaaa
     4261 cgaagccaat tgctggataa actctttgtc tgcccttcga accccacctt ctccttgaac
     4321 tagctccagc ataacggcag ctgtttgtgg accaactaat gattttaccg actccaaatc
     4381 attgtaatcc gcataggaga agcctgagac tagtggggca aaaagcccaa tgtcattaag
     4441 ttaactaacc tatcacgttt tgtggtaggt tagttttttc tatagtacac taaaaataaa
     4501 aggggaaaag tcatgctaga tcagattaaa gctcatttac ttgatagtat taacgacatc
     4561 gtttccaccg caaaccagtt tttacttcat cctaaaaaag attttagtcg gaaaagtcag
     4621 ctaactagga atcttgatga acgagcagct tttattgaca tgctgaagac ctcttctttc
     4681 aaacaagctc tggtgataat ggataggggg
//
LOCUS       DASFQD010000147         4661 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.149, whole genome shotgun sequence.
ACCESSION   DASFQD010000147 DASFQD010000000
VERSION     DASFQD010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4661
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.149"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..2134)
                     /locus_tag="U1021_002053"
     CDS             complement(<1..2134)
                     /locus_tag="U1021_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEM4712544.1"
                     /translation="MIRKEHNEFTRVQIPAALHLTRLGYDYLSANSKEVKERDPDTNI
                     LLSIFKQQFLKLNNYASEADFEREFENIRLELEQDDIGRSFFNRIHADSGYTYINWDN
                     IEENTFHIALEVTCQNGEEEFRPDITIFINGLPLSYIEVKQPNAIREGKTGIQSEKDR
                     TKFRFENKKFRRFNNITQLIAFSDNLPYDDSQGQQLQGSFYCTNAYSGTKFNSFKEEQ
                     ERQVQSSLSSLTEEMIDLVLTDVNRFALKSQVEFRTNLDPASPCNSFLTSLYQKERLF
                     FMLRYGLVYVEERDEHDQIQLQKHAMRYPQYFATKAIERGLEEGMKKGVIWHTQGSGK
                     TALAFFNIRYLRDFYAKRGIVPQFYFVVDRLDLADQAFKEFSKRGLKVKRINKPSELN
                     QIQDQHHVSVVNIQKFKESSDLTDHSGYDLNRQNIYFIDEAHRSYNEKGSYLPNLYNA
                     DKEAVKIALTGTPLIATKADGKTKETAVTTRDIFGDYIHKYYYNQSIADGFTLRLMRE
                     DIETSYKETLQAVHEEIQKGSIEKKEIFAHPRYVSPMLDFILDDFTRAREILFGDQSI
                     GGMVVCDSSEQAQELHKQLEDRRKAGLTSFTSTLILHDAGDKEYKKEEVDKFKDGLTD
                     FVIVYSMLLTGFDAPRLKRLYLGRKIKAHNLLQTLTRVNRPYKDYAFGYVIDFADISK
                     EFDKTNKAYLEELNREYQAALIEEDGDNP"
     gene            complement(2315..3631)
                     /locus_tag="U1021_002054"
     CDS             complement(2315..3631)
                     /locus_tag="U1021_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-containing oxidoreductase"
                     /protein_id="HEM4712545.1"
                     /translation="MEQFDLLVIGFGKAGKTLAGKLSAAGKKVALVEENPAMFGGTCI
                     NIGCIPTKTLLVAADKNWTFEQVMEQKETVTTRLRNKNEAVLKGSGANLYQGHARFVA
                     DKVVEVSAGEESIQLTAETIVINTGAKSRVLPIPGLLDTAHVYDSTGVQNLEVRPNKL
                     AIIGGGNIGLEFAGLYSKLGSQVTVYEASSAILPREEEVVAKLAKEYMEEAGVTFVLG
                     ANIEQVAAAGEQVAVTVNGQTAIFDAVLYATGRVPNTADLGLENTATELLENGAVKVD
                     DYCETTVPGVYAVGDVNGGPQFTYTSLDDFRIVFGKLTGTGTYNLSQRKSIPTSVFIT
                     PVLSRVGLTEKEAKEAGYDYIANELLVANMPRAHVNNDLKGIFKVIVDKESKLVLGAT
                     LFGRNSEELINLIAMAIDNKIPYTYFKTQIFTHPTMAENLNDVFNF"
     gene            3849..4658
                     /locus_tag="U1021_002055"
     CDS             3849..4658
                     /locus_tag="U1021_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018381403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family intramembrane metalloprotease"
                     /protein_id="HEM4712546.1"
                     /translation="MKEKFQMCKTYLPVVLATIGFVNGCKIIFGELGKPNGMEAKYPL
                     FLLTISLVAIYIIPLLVLTYSLAKRYNISKQVIGLSWLLGLTSSISFSELGHTAIGYF
                     LLEIVKASNNFLNDWGAAISGPLAEEIGKGLSVLLVLLICRKMTLKNALVSGVIVGLG
                     FQIMEDITFVFRDMFMNKLDGFETILERVGQAGWAHWVFTLLFAIGLVALLTKNTGMS
                     KAQGVFWIGASFGIHFLFNSPFNTGIFQTVFPILSIFLGLLAYQTVEKLSE"
BASE COUNT         1326 a         1024 c          899 g         1412 t
ORIGIN      
        1 aaggattatc tccgtcttct tctatcaaag ctgcctggta ttcccgattg agttcttcca
       61 gataggcttt attggtcttg tcaaattcct tggaaatgtc cgcaaaatca atgacatagc
      121 caaaagcata atccttgtac ggacggttga cacgggtcaa ggtctgcaag agattatggg
      181 ccttgatttt ccgtccaaga tagagccgtt tcagccttgg tgcatcaaaa cctgtcaaga
      241 gcatggagta gacaatgaca aagtctgtta aaccgtcctt gaatttatcc acttcttctt
      301 tcttgtattc cttatcccca gcatcatgta aaatcaaggt tgaagtgaat gatgtaagcc
      361 ctgcttttcg acggtcttct aactgtttgt gtaattcttg tgcttgttct gaagaatcac
      421 agaccaccat tccaccgata gactggtcgc caaataagat ctctcgtgct cttgtaaaat
      481 catcaagaat aaagtctaac attggagaga cataacgtgg gtgggcaaaa atttctttct
      541 tttcaatgga gcctttttga atctcttcgt gtacagcttg tagagtttcc ttgtaagaag
      601 tttcaatgtc ttccctcatc aaccgtaggg taaaaccgtc agcaatggat tgattatagt
      661 agtatttgtg gatatagtcc ccaaagatat cacgagtcgt cacagctgtt tccttggttt
      721 taccgtcagc ctttgtcgca atcaaaggcg ttcctgtcag tgcaatctta acagcttctt
      781 tatcagcatt atatagattt ggcagatagg aacctttttc attgtaagaa cggtgagcct
      841 catcaatgaa gtagatattt tgccgattca agtcatagcc tgaatgatct gtcaaatcag
      901 aggattcttt gaatttttgg atgttgacaa cagaaacatg gtgctggtct tgaatctgat
      961 ttaactcgct tggtttgtta attcgtttga ctttgagacc acgcttgcta aattccttaa
     1021 aggcttgatc agccaaatcc aatcggtcta ccacaaagta aaattgcgga acgatccccc
     1081 ttttagcata aaagtctcgt aaatatcgga tattgaaaaa ggcgagagcg gtttttccag
     1141 aaccttgtgt atgccaaata acacctttct tcatcccttc ttccaatcct cgctcaattg
     1201 ccttggtcgc aaaatattga ggatagcgca tggcgtgttt ttgtagttga atctggtcat
     1261 gctcatctcg ttcttccaca tagactagac catagcggag catgaaaaag agccgttctt
     1321 tctgataaag ggaagttaaa aaggaattgc aaggacttgc aggatccaag ttggttcgga
     1381 attcaacttg cgacttgagg gcaaagcgat tgacatctgt gagaaccaaa tcaatcatct
     1441 cttctgttaa gctagacagg ctagactgta cttgtcgctc ctgctcttcc ttgaaagagt
     1501 tgaacttggt accagaatag gcattagtgc agtaaaatga cccttgcaac tgttgtcctt
     1561 ggctatcatc atagggaaga ttgtctgaaa aagcaatcaa ctgtgtgata ttgttaaacc
     1621 gtctgaactt tttattttca aatcgaaact tggtccgatc cttttcagac tgaatacctg
     1681 tcttcccctc tcgaatggca tttggttgtt tgacttctat ataactaagt ggcaaaccat
     1741 ttataaatat cgtaatatct ggtcggaact cttcttcacc attttggcag gttacttcta
     1801 aggctatatg gaaggtattc tcctctatat tatcccaatt gatataggtg tagccagaat
     1861 ctgcatgaat cctattaaaa aaacttcgtc caatatcatc ttgttccaat tccaagcgga
     1921 tattctcaaa ttcccgttca aagtcagctt cacttgcata attgttcaat ttaaggaact
     1981 gttgtttaaa aatggatagt aagatatttg tatccggatc tcgttcttta acttctttac
     2041 tattagccga aagatagtca taaccgagtc tggtcaaatg taaagcagca ggtatttgca
     2101 ccctcgtaaa ctcattgtgt tcctttctta tcatacatgc tctcctagtc tattcttacc
     2161 attcattata ccatatttgc aagtgcttac cgacaaaaaa ccgcccatta cggacggtca
     2221 tagtcagtca atgaaataag gtcactcgat gatcttgaca atagtctagg aaacgcagcc
     2281 acaactaata caagaagctt atctccctag agtattaaaa gttaaagaca tcattcaaat
     2341 tctcagccat agtcggatgg gtgaagattt gtgttttgaa gtaggtataa ggaatcttat
     2401 tgtcaatcgc catagcaatc aagttaatca gctcctctga attgcgacca aagagagtcg
     2461 cccccagaac aagcttactt tccttatcca cgataacctt gaaaatgcct ttgaggtcat
     2521 tattgacatg ggcacgtggc atattggcga caagcaattc gttggcaatg tagtcgtaac
     2581 ctgcttcctt ggcttccttc tcggtcagac caacacgaga cagcacaggc gtaataaaga
     2641 cacttgtcgg aatagacttg cgttggctca agttgtaagt accagtccca gtcaacttgc
     2701 cgaaaacgat acggaagtcg tctagggatg tgtaagtgaa ttgtggaccg ccattgacat
     2761 ctcccaccgc atagacacct ggaacagtgg tttcgcaata gtcatccacc tttacagcac
     2821 cattttccaa aagctcagtc gccgtatttt ccaagcccaa gtcagcagtg ttcggcacac
     2881 gacctgtcgc atagaggaca gcatcaaaga ttgctgtttg accattgact gtcacagcaa
     2941 cctgctcacc ggctgcggct acttgctcga tgttagctcc caagacaaag gtcacgccag
     3001 cttcttccat atactccttg gctaacttgg caaccacttc ctcttctctt ggtaaaatag
     3061 cagagctggc ttcatatact gtcacctgac tgccgagttt gctataaaga ccagcaaact
     3121 ccagcccaat gttaccacca ccgataattg ccaacttgtt aggacgaacc tccaaattct
     3181 gaacgccagt actgtcataa acgtgagctg tatccaacaa acctggaatt ggaagcacgc
     3241 gcgacttagc acctgtattg atgacaatag tttccgcagt cagttggatc gactcttcac
     3301 cggccgacac ttcaacgact ttgtccgcaa caaaacgtgc gtgaccttga taaagattag
     3361 caccactgcc tttcaagact gcctcgtttt tgtttcgcag acgagtggtg actgtttcct
     3421 tttgctccat tacctgctca aaagtccagt ttttatctgc cgcaaccaag agggtcttgg
     3481 tcggaataca gccaatgttg atacaagtcc cgccaaacat agcaggattt tcctcaacca
     3541 aagctacctt tttaccagct gcagaaagct ttcctgctaa ggtctttcca gccttaccaa
     3601 aaccgataac taacaaatca aattgttcca taagatactc cttttgtatt tttcaaccct
     3661 agtctatcaa aaaagaataa ttttggcaca attctgctac agctctatta tggagtccta
     3721 gttgcaggaa aaaacattac aataactgag aaggtttaga taaaaaatag gtgaataata
     3781 gacgaaatgt acttattttt gatacaatgt atccatacac cagtttatta atacagaaag
     3841 gtaaaactat gaaagaaaaa tttcaaatgt gtaaaactta tcttccagtc gtcttagcaa
     3901 cgattggatt tgtcaacggt tgcaaaatta tctttggaga attaggtaag ccaaatggca
     3961 tggaagctaa atatcctctc tttctcctaa ccatttcctt ggtcgctatt tacatcatcc
     4021 ccctactagt actgacatat tccttagcta aacgctataa catctccaaa caagttatag
     4081 ggcttagctg gcttttaggc ttaacaagta gcatctcttt ttctgaactg ggacatacag
     4141 ctatcggata tttcctgctc gaaatcgtta aagctagtaa taatttccta aatgactggg
     4201 gcgcagctat ttcaggtcca ttggcagaag aaatcggaaa agggctaagt gttctacttg
     4261 tactgcttat ttgtagaaaa atgacactaa aaaatgcatt ggtaagcgga gtgattgttg
     4321 gattaggttt ccaaatcatg gaagacatca cctttgtttt tagagacatg ttcatgaata
     4381 aattagacgg ctttgaaact attcttgaac gcgttggtca agctggttgg gcccattggg
     4441 ttttcacgct tctctttgcc attggcttag tagcccttct cacgaaaaat acaggtatgt
     4501 caaaagcaca gggagtattt tggatcggtg caagctttgg aatccatttt ctctttaatt
     4561 caccgttcaa cacgggcatc ttccagacgg tgtttcctat cttgagcatt ttccttggct
     4621 tacttgccta tcaaacggtt gagaaactat ctgaatagac a
//
LOCUS       DASFQD010000148         4639 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.150, whole genome shotgun sequence.
ACCESSION   DASFQD010000148 DASFQD010000000
VERSION     DASFQD010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4639
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.150"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..1027)
                     /locus_tag="U1021_002056"
     CDS             complement(<1..1027)
                     /locus_tag="U1021_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEM4712547.1"
                     /translation="MQASSRSLRLMGTIIETKIWHPDAEPILDQVEELLYLYKDRFSA
                     NDLTSELMEVNLNAGVQAVPVADDLYELIKLGKEHSLAQGSFLNITIGPLVQSWRIGF
                     SDAKLPTQEMISEKLQLINPRDIELDDEEQTVYLKKEGMVIDLGALAKGYVADKIVDF
                     LKRIGVEAGLINLGGNVLTFGQAQHNPDGCWRIGIQDPQKTRGENALVLNIGEESVVT
                     SGIYERTLTVNGKTYHHILSPETGYPIESQLASLTIVSKQSVDGEIWTTRLFGQEITR
                     VYKMVEETDGIEAVLIGLDGRILVTSGLSEKVLAGKERISDSLGSPSRGGFGARVASD
                     LASGASVL"
     gene            complement(1014..1958)
                     /locus_tag="U1021_002057"
     CDS             complement(1014..1958)
                     /locus_tag="U1021_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional oligoribonuclease/PAP phosphatase
                     NrnA"
                     /protein_id="HEM4712548.1"
                     /translation="MTIYSTIIEKIREYDTIIIHRHQRPDPDAIGSQVGLQKLLQKNF
                     PEKTIKVTGFNEPNLSWMAEMDQVSDQDYQGALVIITDTANTARVDDDRYAQGDFLIK
                     IDHHPNEEPYGDLLWVNTEASSCSEMIAELGLQSQLELDGETARLLYAGIVGDTGRFL
                     YPATSSRTFEIVARLRQEDFDFARMSRQMDTIDFKIAKLTGYVYDNLEVDEYGAARVI
                     LTQDILKKYGVTDADTSFIVGAPGRIGTVQSWGIFVEQTDGNYRVRLRSKYIPINEIA
                     KRHDGGGHPLASGANSYSLSENEQIYQEIQEVVRNASK"
     gene            2054..2515
                     /locus_tag="U1021_002058"
     CDS             2054..2515
                     /locus_tag="U1021_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HEM4712549.1"
                     /translation="MALAKIVYASMTGNTEEIADIVASKLEELGLEVQVHECTTIETD
                     EILDADLIVVASYTYSYGGDGELPDEIVDFYADLADLDLTGKVYGVCGSGDTFYDDFC
                     SAVDDFDVMLGSRGATKGAENVKVDLAAEDEDIVNLEQFATDLVAKLDIMN"
     gene            2657..2926
                     /gene="rpsN"
                     /locus_tag="U1021_002059"
     CDS             2657..2926
                     /gene="rpsN"
                     /locus_tag="U1021_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001085658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEM4712550.1"
                     /translation="MAKKSKMARYQRQLELIERYAGLRKSLKEKGDYQALRKLPRDSN
                     PNRLKYRDRTDGRPHAYMRKFGVSRITFRELAHLGQLPGVKKASW"
     gene            3008..3286
                     /locus_tag="U1021_002060"
     CDS             3008..3286
                     /locus_tag="U1021_002060"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEM4712551.1"
                     /translation="MNLDCIREQINTIDSQLVELLEKRMELVDQVTAYKRATGKPVLD
                     TSRENAVLERVGKLVQKDDYRSAIQATFSDIMAQSRTYQSSKLANHEQ"
     gene            3276..4490
                     /locus_tag="U1021_002061"
     CDS             3276..4490
                     /locus_tag="U1021_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEM4712552.1"
                     /translation="MSNRMKQAIQLLFFSSLIGVGAGIITTLFGKILLGIGDLRSEYF
                     TYLILFLPLAGVVIVFIYQKWGRELQAGMGLVFKAGQGELVQISPVLIPLIISTTWLS
                     HLVGASVGREGVAVQLGASLSHWLQKHGFTHLPKDIITKIGMAAGFAGLFQTPLAASF
                     FAIEVLIVGQYSWSSLPYCLVAAFTASTTSHLLGLEKFSHTISSFSFQFTDSFKWLLI
                     AICFGVVGNLFAWFLAQAKSISTRWLPNPYIKIAIMGVGLTVLLFFFHQGRYTGLGTN
                     LIDASLAWEQVFAFDWLLKLLLTCLCLAAGFQGGEVTPLFAIGASSGAVLAGLLGLPT
                     ERVAALGYCAVFGTATNTLLAPLFISYEVFGANILPCAIPVLAIAYLINRKQTIYGQQ
                     LRKFNNAKKPII"
     gene            complement(4511..4582)
                     /locus_tag="U1021_002062"
     tRNA            complement(4511..4582)
                     /locus_tag="U1021_002062"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4547..4549),aa:Arg,seq:cct)
BASE COUNT         1267 a         1018 c          972 g         1382 t
ORIGIN      
        1 atagtacgga agcacctgaa gcaaggtcag aagctactct ggcgccaaat ccccctcttg
       61 aaggactgcc caagctatca gaaattcttt ctttaccagc aagaactttc tcagaaagcc
      121 ctgaggtcac tagaatcctg ccatccagcc caatcagaac cgcttcgata ccatcagttt
      181 cttccaccat cttataaacc cgagttattt cttgaccaaa cagtcgagtc gtccaaatct
      241 caccgtcaac agattgtttg gacacaatgg tcaaactagc cagctgcgac tcgattggat
      301 agccggtctc gggactcaaa atatgatgat aggtctttcc attcacggta agggttcttt
      361 cgtaaatgcc agaggtgaca actgactcct ctcctatgtt gagaacgagg gcattttcac
      421 cccgtgtttt ctgaggatcc tgaatcccaa ttcgccagca accatctggg ttatgctgag
      481 cctgaccgaa agttaagaca ttgcctccca ggttaatcag tccagcctcc acacctattc
      541 ttttcaagaa gtcgacaatc ttatctgcta catatccttt agcaagagca cccagatcaa
      601 tgaccatacc ttcttttttc aaatagactg tctgctcctc atcatctaat tcgatgtccc
      661 ttggattgat gagctggagt ttttcactga tcatttcttg ggttggaagt ttggcatcgc
      721 taaacccaat ccgccagctt tgcacaaggg gaccaatggt aatattcaaa aaagatccct
      781 gagccagact gtgttctttg cccaatttaa tcaattcata caggtcatcg gcaacaggaa
      841 ccgcctgaac acctgcgttg aggttgacct ccattaattc agaggtcaag tcattggcag
      901 aaaaccgatc cttgtagaga taaagaagct cttctacctg atccaaaatc ggttctgcat
      961 ctggatgcca tattttagtt tctatgatgg ttcccattag acgaagggaa cggctacttg
     1021 cttgcattcc tcacgacctc ttgaatttct tgatagattt gctcattttc ggaaagggaa
     1081 taagagttag caccgctggc tagtgggtgg ccaccgccat cgtggcgctt ggcaatctcg
     1141 tttatcggaa tgtacttgct gcgtaagcga accctgtaat ttccgtcagt ttgttccaca
     1201 aaaatccccc aagattgtac agtgccaatc cgtcctggtg cacctacgat aaatgaagta
     1261 tccgcatcgg tcaccccgta ttttttgaga atgtcctgtg tcaaaataac ccgtgccgca
     1321 ccgtactcat cgacttccaa gttgtcgtag acgtagcctg tcagcttggc aatcttaaaa
     1381 tcaatggtat ccatctggcg agacatcctt gcaaagtcaa aatcttcctg acgaagtcgg
     1441 gcaacaattt caaaagtgcg tgagctagtc gccggataaa gaaaacgtcc cgtatcgcca
     1501 acaataccag catatagcag tcgagcagtt tccccatcca attccaactg gctttgaagg
     1561 cccaattctg caatcatttc actgcatgag ctagcctcag tattgaccca gagcaagtca
     1621 ccataaggct cttcattggg gtgatgatcg attttaatca agaaatctcc ttgagcatag
     1681 cggtcgtcat ccacacgcgc cgtattggca gtgtccgtta tgataaccaa ggccccttga
     1741 taatcttggt cggaaacctg atccatttct gccatccagg aaagattcgg ctcattgaaa
     1801 ccggtcacct taatggtttt ttcaggaaaa ttcttctgca agagcttctg taagccaacc
     1861 tgactaccga tagcatctgg atctggtcgt tggtgacgat gaatgataat agtgtcatat
     1921 tcacgaattt tttcgataat tgtactgtaa atagtcatag caactccttt ttcatcattt
     1981 tagcataaac ttcccctttt gaaaatgatg ggagtatggt ataataagat tactatgtaa
     2041 tttggaggaa attatggcac tagcaaaaat tgtttacgct agtatgactg gtaacacaga
     2101 agaaattgct gatatcgtcg ccagtaagct agaagagttg ggtttggaag tacaggttca
     2161 tgaatgtact actattgaaa cggatgaaat cttggatgct gacttgattg ttgtagccag
     2221 ctacacctat tcttatggtg gtgatggtga gcttcctgat gaaatcgttg atttctatgc
     2281 tgacctagct gacttggatt tgactggtaa ggtgtacggt gtttgcggtt ctggtgatac
     2341 cttctatgat gacttctgta gtgcagtaga tgactttgat gtcatgttgg gttcacgtgg
     2401 tgcaactaag ggtgccgaaa atgttaaggt agaccttgcc gctgaagatg aggatattgt
     2461 taaccttgag caattcgcga cagaccttgt tgctaaacta gatataatga attaactgac
     2521 aaacagactg gcttatcaat aggtctagtc tgttttcttt tagcctttta ttaagattgt
     2581 acacctattg cttgcaatct taatagtttt gatatataat taactgatta agttttttgg
     2641 aaaaaaggag aattttatgg ctaaaaaatc aaaaatggca cgctatcaga gacagttgga
     2701 gttaatcgag cgctatgcgg gtttacgtaa aagtctcaaa gaaaaaggtg actatcaagc
     2761 acttcgaaaa ttgcctcgcg actcaaatcc aaatcgactg aaataccgcg acaggaccga
     2821 tggccgtccg catgcctata tgcgaaaatt cggtgtgagt cggattacct tccgtgaatt
     2881 agcccatctt ggtcaacttc ctggggtaaa aaaagcaagt tggtaacttc ctcaaacaag
     2941 gctagtattc tgccttgttt tttgctatac taaaaaacaa ccgaaacaat atacggaggt
     3001 ttttaagatg aatttggatt gcatccgcga acagattaac acgattgata gccaattggt
     3061 tgaactactt gaaaaacgaa tggagttggt cgaccaagtt acagcctata aacgagcaac
     3121 aggtaagcct gttttggata ccagccgaga aaatgctgtc cttgaaagag ttggaaaatt
     3181 agttcaaaag gatgattacc gttctgccat tcaagcaacc tttagcgata tcatggcaca
     3241 atcaagaacc tatcaatctt ccaagttagc gaatcatgag caataggatg aaacaagcca
     3301 tccaactcct tttcttttcc agcttaattg gagtcggcgc aggaattatc accacacttt
     3361 ttgggaaaat tctactaggg attggagact tacggtctga atattttaca tatctaatcc
     3421 tctttctgcc acttgcaggg gtggtgattg ttttcattta tcaaaaatgg ggaagggaac
     3481 tccaagcagg tatgggctta gtattcaaag ctggacaagg agagctagtg caaatttctc
     3541 cagttctcat tccactcatc atctctacaa cttggctcag tcatcttgtc ggtgcttccg
     3601 ttggtcgcga aggtgtagct gtccaacttg gagccagtct ctcacattgg ttacaaaaac
     3661 atggtttcac acacttgccc aaagacataa taacaaagat tggtatggcc gcaggttttg
     3721 cagggttatt tcaaacacca ttggctgcta gtttctttgc cattgaggta ttaatcgttg
     3781 gccaatattc ttggagtagt ctcccctatt gtctagttgc cgctttcacg gcttctacta
     3841 cttcccattt attgggatta gagaaatttt cgcacactat ttcatctttt tcattccagt
     3901 ttacagatag ttttaaatgg cttctgattg ccatctgctt tggagttgtc ggtaatttat
     3961 ttgcttggtt tctggcgcaa gcaaaaagca tctcgactcg atggcttcca aatccttaca
     4021 ttaaaatagc tatcatggga gttggactga ccgttctact atttttcttc catcaaggtc
     4081 gttatactgg tctcggaacc aatttgatcg atgccagttt agcttgggaa caggtgtttg
     4141 ctttcgattg gctactaaaa ctcctactaa cctgtctttg tttggctgca ggttttcaag
     4201 ggggcgaagt tactccgctc tttgcgattg gagcaagttc tggggctgtt ttagcaggat
     4261 tactaggtct accaactgaa cgtgttgcag cccttgggta ttgtgccgta tttggaacag
     4321 ccaccaatac cttactggct cctctcttca ttagttatga agtattcggc gctaatatcc
     4381 tgccctgtgc cattcctgta cttgccatag cttatcttat aaacagaaaa cagactattt
     4441 atggacagca gttgaggaaa ttcaataatg caaaaaagcc tatcatttag gctttttcgt
     4501 atactcttca tctcccctgc aggaatcgaa cctgcaacta attcttagga ggaatttgtt
     4561 atatccattt aactaaggga agtctgcttc tctattgtac cccagaagag agcagattgc
     4621 aagagcaagg ttatataag
//
LOCUS       DASFQD010000149         4590 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.151, whole genome shotgun sequence.
ACCESSION   DASFQD010000149 DASFQD010000000
VERSION     DASFQD010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4590
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.151"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..4261
                     /locus_tag="U1021_002063"
     CDS             <1..4261
                     /locus_tag="U1021_002063"
                     /inference="COORDINATES: protein
                     motif:HMM:NF017180.1,HMM:NF019142.1,HMM:NF019216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="G5 domain-containing protein"
                     /protein_id="HEM4712553.1"
                     /translation="SYTVDGQVVKTEEISNEITTDPRPKIIQVGTKVKEIPTITITSI
                     AEDENAKSAEASFELSDRTQSYISAVAQLYQGDQLVREIPITDVTAPLALTGLDYYTD
                     YSLKTIVTYNVGKGPETKLQESTQDFRLDYKKIEIKDIDQVELYGLDNGHYRRQLSLT
                     SETVNLDNYFVKIKSDRFKELLLPISKIEEVEIDGQTKYKLTVETDELVQDTGNQYNK
                     NYSFYVDKRVESQNGIYTSFKELLTAIEANPAGTYTLGADMTADEVDLATDALSYVTS
                     TFTGRLNGAHNGKSYAIYNLIQPLFNVINNATIENVDLIDVAITSKTEKVGALAKTAT
                     GSQITNVSVEGSISAPTSIGGLVYLVNGATKITNSSFKGQLVAIGTNSGGSNIGGIVG
                     WAHDNQTTISQVQSDVAITLSAQNNNYRAGALVGHVQNSARLQDGVAKGTIVNLTTAG
                     QVGGVVGSTWKSGVINNVVSTVQVTNGKRVHGDTAYGSAPITNTFVISSASGAADKWS
                     TEISETEAASKIAAMGITATVADSLNNQAKNLYSVDYSLLDKATPERAIAYANMEKLL
                     PFYNKEYIVYLANKIALTDKLAQTRLLDVVPMVGNQIVTDPNSQKRAINRIMLHYADN
                     TVAYLDVAFKEDFVNSHVSDYTIVGTDLLYIPESFLSNYDGMVHRLTNDISSLVFNSD
                     KVKAVLGIVEPTTPPTENELKNWASDLGVPSTTEQKPLWALYLEDSFNSVRDHLAEDL
                     RKVLASDKAINSLGASVENYLVQKISQNKEALVLGLAYLKRWYNIDFGDLNTRDLTVF
                     KQDFFGNQATSTLDVIIALGNSGYDNLRPKNNVQTYANSLQLAKGKATLFDYLSSYRQ
                     LFVPNKTNNEWLKDTSKAYIVEMASNVEEAAKKQAQATPDSRYALGVYDRITKASWGH
                     QNMLLPLLTLPDESMYIISTMSTLSFGAYDRYLYDGVSNGMKFEDYMHQMVDRAATWQ
                     RNHFDFWYSILSEESREKLFRSVLNYDGFNFRDSAKKATWKNLQNTERSSIANFFGPV
                     GKWYTANGSGAYATGSLTHFVVDRILDQYGTSVFTHEMVHNSDGRIYFEGKGRRQGLG
                     AELFALGLLQAPNGNQARSLGINTLFTGNEDSMTRYHAADPTERYRSVEDLNTYVHNM
                     FDVIYLLDYLEAKSVLKQSDTVKQKWYRVIDNYYIKDKEKNTHAGNTIRQLTLEEATK
                     LTTINDLVDNSIINRREYWDTHTGLTRNGYYTVSLFSPVYSALSNPNGSPGDFMFRRM
                     AYELMAEKGYVEGFIPYVSNQLGKEAEAAGELVYDGWFRRNVGLITDNRVFKHIFKDE
                     YADWATFKKAMYQNRINQLDNLVDFTMTYELDKPNSTKQVTISSFADLEKLMDEAVAQ
                     DMKSIDIVLAHNESSWVNVLKQRIYNALLRNTDDFRTSIFK"
BASE COUNT         1464 a          809 c          967 g         1350 t
ORIGIN      
        1 tagctatact gtcgatggtc aggttgttaa gaccgaggaa atttcgaatg aaattactac
       61 agatccaaga ccaaagatta tccaagtcgg tactaaggta aaagaaatac caacaattac
      121 aatcacttct attgcagaag atgaaaatgc aaaatcggca gaggctagtt ttgaattatc
      181 agatagaact caatcttaca tttcagcggt tgctcagctc tatcagggag accagcttgt
      241 aagagaaatt ccaattacag atgtgactgc acctctcgca ttgacaggtt tggattacta
      301 tacagactat agtctaaaaa caattgttac ctataacgta ggcaagggac cagagacaaa
      361 actgcaagaa agtacacaag atttccgctt ggattataag aagattgaaa ttaaggatat
      421 cgaccaagtg gagttatatg gtcttgacaa tggtcattat cgccgtcaat tgtcattaac
      481 tagcgaaacg gtcaatttgg acaactactt tgtaaaaatc aaatcagatc gtttcaaaga
      541 attacttctt ccaatctcta aaattgaaga agtagagata gatggtcaaa ccaagtataa
      601 attgactgtt gaaactgatg aactggttca ggacacagga aaccaataca ataaaaatta
      661 tagtttttat gtggacaagc gagtagaaag ccagaacggt atatacactt ctttcaaaga
      721 attgttaaca gcaatagaag ccaacccagc aggaacctac acacttggtg cagatatgac
      781 tgctgacgaa gttgacttag ctacagatgc actctcttat gttacatcta cctttacagg
      841 tcgtttgaat ggtgctcata atggtaaatc gtacgctatc tataacctta ttcagccact
      901 atttaatgtt atcaataatg caactattga gaatgtagac ttgattgacg ttgcgattac
      961 ttctaagaca gaaaaagtcg gtgcacttgc taaaacagca actggaagtc agataacgaa
     1021 cgtttcagta gaaggtagca tttcagctcc cacaagtatc ggagggcttg tctatctcgt
     1081 aaatggtgca actaagatta cgaatagttc ctttaaaggt cagcttgtag caataggaac
     1141 caattcaggt ggttctaata ttggtggaat cgtaggttgg gcacacgata atcagacgac
     1201 gattagtcag gtgcaatctg atgtggcgat aacgctttct gctcaaaata ataactaccg
     1261 agcaggagct ttagtaggac atgtccaaaa tagtgctcgt ttacaagacg gagtagccaa
     1321 gggaacaatc gtaaacttga caacagctgg tcaggttggt ggagtagttg gctcaacctg
     1381 gaaatctgga gttataaata atgttgtcag cactgtgcaa gtaaccaatg gtaagcgagt
     1441 tcatggagat accgcctatg gttcggcccc tattaccaat acatttgtaa ttagttcggc
     1501 tagcggtgct gcagataagt ggagtaccga aatttcagaa acggaggcgg caagtaaaat
     1561 tgcagctatg ggaattactg ctacggtagc agatagtctg aacaaccaag ctaagaattt
     1621 gtatagtgtg gattatagct tgctagataa agcaactcct gaacgtgcta tagcctatgc
     1681 taacatggaa aaactgttac cattctataa taaagaatat attgtttacc ttgcaaataa
     1741 gattgctttg acagataaat tagctcaaac gagattatta gatgttgttc caatggttgg
     1801 caatcaaatt gtaacagatc caaatagtca gaaacgcgct attaatcgta tcatgcttca
     1861 ctacgctgac aatacggttg cttatttgga tgttgctttc aaggaagatt ttgtaaatag
     1921 ccatgtatct gattatacaa ttgtaggaac ggatttacta tatattccag aatcattctt
     1981 atcaaactac gacggaatgg ttcatcgcct tacaaatgat atttcaagtt tggtatttaa
     2041 ctcagataaa gtgaaagcgg tattgggaat tgtagagcct acgacaccac caacagaaaa
     2101 tgagttgaag aactgggcat cggatttagg agttccatca actactgaac aaaaaccatt
     2161 gtgggcactg tatttggaag atagtttcaa tagtgtacgt gatcatcttg cggaagattt
     2221 acggaaagtg ttggcttctg ataaagctat caatagccta ggtgcatcgg ttgagaatta
     2281 tctagttcag aagatttctc aaaataaaga agcattggtg ctgggtcttg catatctgaa
     2341 acgttggtat aatattgatt tcggcgattt aaatactcga gatttgacag tctttaaaca
     2401 ggatttcttt ggcaatcaag cgacctctac attagatgtt attattgctt tggggaattc
     2461 aggttatgac aatcttcgtc caaagaataa cgttcagacc tatgctaatt ctttacagtt
     2521 ggcaaaagga aaagctactc tatttgatta tctttcaagt tatcgccaat tgtttgtacc
     2581 aaacaaaaca aataatgaat ggttgaaaga tacaagtaag gcctatattg tagaaatggc
     2641 ttcaaatgtt gaagaggctg ctaagaagca agcacaagca acaccggata gtcgctacgc
     2701 actaggagta tacgaccgca tcactaaggc gagctgggga catcaaaaca tgctcttacc
     2761 tcttctgact ctcccagatg aaagcatgta tatcatttct accatgtcaa ctctatcatt
     2821 cggagcttat gatcgttatc tgtatgatgg tgtgtctaat ggtatgaagt tcgaagatta
     2881 tatgcatcag atggttgata gagcagcaac ttggcaacgg aatcattttg acttctggta
     2941 tagtatttta tcggaagaat cacgtgagaa gctctttcgg tctgttttga actatgatgg
     3001 ctttaatttc cgtgactcag cgaaaaaggc tacttggaag aacttacaaa atacagaacg
     3061 ttcttctatt gctaacttct ttggtccagt aggtaaatgg tatacagcga atggatcagg
     3121 tgcgtatgca acaggttctt taacgcattt tgttgttgat agaatattag accaatatgg
     3181 tacttctgtc tttacccatg aaatggttca taactctgat ggaagaattt atttcgaagg
     3241 aaaaggtcgt cgtcaaggtt taggggcaga attatttgct cttggtctat tgcaagctcc
     3301 aaacggtaat caggcacgtt cgctagggat taatactcta tttactggaa atgaggattc
     3361 catgactcgt tatcatgcgg ccgatcctac ggaacgttac cgcagtgttg aagatttgaa
     3421 tacctatgtt cataacatgt ttgatgttat ttacttgcta gactacttag aagctaagtc
     3481 tgttttgaag caaagcgata ctgtcaagca gaaatggtat agggtcattg ataattacta
     3541 tatcaaggat aaagaaaaga acacgcatgc aggaaataca atccgtcaat tgactcttga
     3601 ggaagctacg aaactgacaa ccattaatga tttggttgat aacagcatta tcaaccgtcg
     3661 cgaatattgg gacacacata ctggcttaac tcgtaatggt tattatactg ttagtctctt
     3721 ttctccagtt tattccgctt tatctaatcc aaatggttct ccaggagact tcatgttccg
     3781 tcgtatggcc tatgaattga tggcagaaaa aggctacgta gaaggattca ttccttatgt
     3841 atctaatcaa cttggtaaag aagcggaagc ggctggggaa cttgtgtatg atggttggtt
     3901 tagacgaaat gttggtctca tcactgacaa cagagtcttc aagcacattt ttaaagatga
     3961 gtatgctgat tgggcaacat ttaagaaagc tatgtaccaa aatcgtatta atcaacttga
     4021 caacttggtt gacttcacaa tgacctacga attggataag ccaaactcaa caaaacaagt
     4081 tacgattagc tcttttgcag atttagaaaa gcttatggat gaagctgtgg ctcaagatat
     4141 gaagagcatt gatatcgtac ttgctcacaa tgagtcaagt tgggtcaatg tcctcaaaca
     4201 acggatttat aatgctcttt tgagaaatac ggatgatttc agaacttcta tttttaaata
     4261 gtatgagaag aaggagcgaa ctggttatat ggtaaatggt tccgccccta tcgttctagg
     4321 actgtaaagt tatctgtaag tcgttacttg caaaccaaga ctctagataa cagcatgctg
     4381 tcaagtggat atatcgtcat ttagtttttc ttttattact tcgacgactg aaaagctcca
     4441 ttggaggttt tcagcctacc acctgtcatt aaaagagtgg tagtttgaac ttgccttgcc
     4501 tgattttgta aaagtgcctt gctttgcaag tattatctcc caccttgcac agtccattga
     4561 ctgtgcaagc aatctggggg atacgaatag
//
LOCUS       DASFQD010000150         4558 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.152, whole genome shotgun sequence.
ACCESSION   DASFQD010000150 DASFQD010000000
VERSION     DASFQD010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4558)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4558)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4558
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.152"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            36..2684
                     /locus_tag="U1021_002064"
     CDS             36..2684
                     /locus_tag="U1021_002064"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712554.1"
                     /translation="MFERIIAKVDEEIQQVLEIPDSGAILMDLLLEIAQYQLQNKSNS
                     ISKTDFLRLNFWSNYGISKKPFFISNLVKSGLVIDYLFTDKEVYSFGYNLLEDYLKAK
                     VIMELYSNNEAIREYSEKELLKIEKGEIQNGYNIDTFLFVCCFCFQKFGEDCINLIEK
                     VTDEYDCYDLANRYIKSFSWRPADTLSRELFESIVHHYPTDIDLVLRVLIENCTKEKS
                     PLNAEFLHEILFTKKLNERDGFWLPLINQLTYEDERVYQLISLYDNGDRVNELSKEKT
                     KLLLTLFTWLLASSNRKLRDVTSKAMIEILKYDFELSEFLLRKFEDVNDPYIIQRLYG
                     VIFGASTKKVNLFDNEFQSLAEYVYLNVFDKESIYPDILLRDYARLIIERYLFEFPDK
                     ETKINYSKIVPPYKSEPIPVVPIETYRNFESGSKIDGFDRIDSSMRPEGVGIYGDFGR
                     YTFQSALAQFENIDIENLYHYAMQFIRDELGYTSNKDLSEYDMGMRRPLDRSGGQSAE
                     RIGKKYQWIAFYNILARISDTHNLRKWDDEDTGFKGPWNPYVRDFDPTLNHHTLSPLH
                     ILPKFSIDYELEFLEQESNNNEEIDEWINQKPSLFNMPLHYKDDNGIEWVLLHQHKEL
                     KYIPEENEGNLFGYIEGEQRIWRIVEAYFIANSEFAGFIQNIQENKFLRNNLSGGAPS
                     YYQFYNREYAWSSSVIEAYNIQYDYYVESGKQRTERQKKTDFKLSGDRFEFVEIEEDV
                     VVNIKKKIAKLQPARIHFLWEEEYDLSKEKTVSFDIPSTTIVSKLNLTQKEHDGYYYD
                     GNNLVVFDGELTGVINGLIIRKDYLDRFLKENELSIIWDFVGEKQYFTQTPREQYYSR
                     WEGIFWKDKDSMSSQIYLDEQRTVKD"
     gene            complement(2922..3008)
                     /locus_tag="U1021_002065"
     CDS             complement(2922..3008)
                     /locus_tag="U1021_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003049409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative holin-like toxin"
                     /protein_id="HEM4712555.1"
                     /translation="MQLMLGFGSFLLSLIGLVIVIVKMSNKK"
     gene            3361..4266
                     /locus_tag="U1021_002066"
     CDS             3361..4266
                     /locus_tag="U1021_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003001102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEM4712556.1"
                     /translation="MYMSVKQAAELWGISDRRVRDLCSQGKVEGAIREGRLWKIPKDT
                     PKPVDGRYKRVESLLPLIDEKMARLATLRPLTRGEIERLNEEFTVEFTYNSNAIEGNT
                     LTLRETDMVLRGLTIDQKPLKDHLEAIGHREAFEYVQTLVAEDTPLTEQVVKDIHYLV
                     LSDKKDDRGVYRKVPVRIMGAANEPAQPFMIRPLMEQWLADYAQCQENIVTKMARFHI
                     AFESIHPFIDGNGRTGRLLVNLELMKAGSPPIDIKVSDRLANYQAFDDFYAKGSLSAM
                     EDLFARYLNERLDMYLSILSLDDVE"
     gene            4292..>4558
                     /locus_tag="U1021_002067"
     CDS             4292..>4558
                     /locus_tag="U1021_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002920702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712557.1"
                     /translation="MAHFDLTERYDFQQWIITDLETENGFTHRPQSKYNQRLAMDTDI
                     LWEFLRATQEDEMDYLLKKLDKEVILNLINQEIIKGGLLFALKSG"
BASE COUNT         1501 a          680 c          949 g         1428 t
ORIGIN      
        1 agacatataa tggagaagag ttaaatcttt ttcaaatgtt tgaaagaatt attgctaaag
       61 ttgatgagga aattcaacaa gttttggaaa ttccagattc tggagcaatt ttaatggatt
      121 tacttttgga aattgcccaa tatcaactac aaaataaatc aaatagtata agtaaaacag
      181 attttttgcg gttaaatttt tggtcgaatt acggtatttc aaaaaagcca ttctttattt
      241 caaatcttgt caaatcaggt ctcgtaatcg attatttatt tacagataaa gaagtctatt
      301 cttttggata caatttgtta gaagattacc taaaagcaaa agttatcatg gaactttatt
      361 caaataatga agcaatcagg gagtactctg aaaaagagtt attgaagatt gaaaaggggg
      421 aaatccaaaa cggctataat atcgatacgt ttctttttgt ctgttgtttt tgcttccaaa
      481 aatttggtga agattgtatt aaccttattg aaaaagttac tgatgagtat gattgttatg
      541 acttagcaaa tagatatata aaaagttttt cttggcgtcc agctgatacg ttgagtagag
      601 aactttttga aagtattgta catcactacc ccactgatat tgatttagtt ttacgagttc
      661 ttattgaaaa ttgcactaaa gaaaaatctc cgctgaatgc agaattttta catgaaatat
      721 tgtttactaa aaaactaaac gaacgcgatg gattttggtt gccgcttatt aatcaattaa
      781 cttatgaaga tgagagggtt tatcagttaa tttctttata tgataatgga gatagggtaa
      841 acgaactgtc aaaagaaaaa accaaactac ttcttacttt atttacatgg ctattagcgt
      901 cttctaatag aaaattgaga gatgtaactt caaaggctat gatagaaata ttgaagtatg
      961 attttgaatt aagtgaattt ctgttaagaa agtttgaaga tgtgaatgat ccttatatta
     1021 ttcagaggtt atacggagta atatttggag caagcaccaa aaaagttaat ctatttgata
     1081 atgaatttca atccttagca gaatatgttt atttaaatgt attcgataag gaatctatct
     1141 atccagatat tttgttgaga gattatgcaa gattaattat tgagagatat ttatttgaat
     1201 ttcctgacaa ggaaactaaa ataaattatt caaaaatagt gcctccatat aaatcagaac
     1261 caattccagt agtaccgatt gagacttaca gaaattttga atcaggctcg aagattgatg
     1321 gatttgatcg gatagattct tccatgagac cagaaggagt cggaatatat ggtgattttg
     1381 gaagatacac tttccaatca gcattggctc aatttgagaa tatagatatt gaaaatctat
     1441 atcattatgc catgcaattt attcgtgatg aattaggtta tacgtcgaat aaagatttgt
     1501 cagaatacga tatggggatg cgtcgtccgc tagatagaag tggagggcag tcggctgaaa
     1561 gaattggtaa aaagtatcaa tggatagcgt tctacaatat tttagctaga atctctgata
     1621 ctcataatct cagaaaatgg gatgatgaag acactggttt taaagggcct tggaatccct
     1681 atgtaaggga ctttgatcct actttgaatc accatacctt gtcaccgttg catattcttc
     1741 caaagtttag tattgattat gagttagaat ttcttgaaca agaatcgaat aataatgaag
     1801 agattgatga atggattaat caaaaaccga gtttatttaa tatgcctttg cattataaag
     1861 atgataatgg aattgagtgg gtgttattac accaacacaa agaattaaaa tatatacctg
     1921 aggaaaatga aggaaattta tttggttata ttgaaggtga acaaaggata tggagaattg
     1981 tggaagccta ttttattgcg aactcagaat ttgcaggctt tattcaaaat atccaagaaa
     2041 acaagttttt gagaaataat ctttctggag gagctccttc ttattatcaa ttttataata
     2101 gggagtatgc ttggtcatca agtgtaatag aggcatataa tattcagtac gattattatg
     2161 tggaatctgg gaaacagagg actgagcgac aaaaaaagac agactttaag ttgtcaggtg
     2221 acagatttga atttgtagag atagaagaag atgttgtcgt aaatatcaaa aagaaaattg
     2281 ctaagttaca gccagctcgc atccattttt tatgggagga agaatacgat ttatctaaag
     2341 aaaaaacagt ttcattcgat attccaagta caacaatcgt aagtaaactg aatttaactc
     2401 aaaaagagca cgatggttat tattatgatg gcaacaactt agtcgttttt gatggagaac
     2461 tgactggtgt gattaacggt ttaatcatta gaaaagacta tcttgataga tttttaaaag
     2521 aaaatgaatt aagtattatt tgggatttcg ttggagagaa gcaatatttc actcaaacac
     2581 caagggaaca atattacagt cgatgggaag gtattttttg gaaggataaa gatagtatga
     2641 gtagtcaaat atatttggat gagcaaagga cagttaagga ttgattagtc tgtatataag
     2701 ttaactatct tccttccgaa ctatattaga ataagcacaa gtttagttag gagttctaac
     2761 cgctaaagta ggacctcgtt tgactatttt ttctagttag gttataatga gaatagaaaa
     2821 gggtagttgc actcacaact acccaatgca gaaccgttta agacggtgac tagttttata
     2881 attactaaaa aataatcgtc aaccggtcaa agtttagacg gttatttttt attgctcatt
     2941 tttacgatga caatcactaa gccaataagg gatagtagga aactaccgaa tcccagcatc
     3001 agttgcatcg tctcgtaaac tgacaacaat ctgctccttt ctgttagatt ttgatgagtt
     3061 gcccataggc accacctacc tttcagaaat tagagccacc gtctttaaga agctattatt
     3121 gctttagaaa cataaaacct ctcttcccat ttggagaaac tcttctgcat aaataattat
     3181 agcataccta catggaaaat agttgaattt ttgatgaatg attattctgt caaaattatt
     3241 aggctattcc tatccttccg aaaatttcca aacatccttc cgttagtccc ctatccttcc
     3301 gaactgtgct ataatagtat tagaaaaaag gactgttttg gttagaaggt gaggtgtcct
     3361 atgtatatgt ctgtcaagca ggcggcggag ctctggggga tttcagatcg tcgtgttcgt
     3421 gacttgtgta gtcagggaaa ggtggaaggt gctatccgtg aggggcgttt atggaagatt
     3481 cccaaagata ctccaaagcc agttgatggt cgttataaaa gggtggaaag cctcctgccc
     3541 ttgattgatg aaaagatggc aaggttagcg acgcttcgtc ccttgaccag aggagagatt
     3601 gagcggctca atgaagaatt tacagtggag ttcacttata attccaacgc tattgagggc
     3661 aataccctga ccctgcgtga aacggacatg gttttgcgtg ggttgaccat tgatcagaag
     3721 cccttaaagg atcatcttga ggctattggt catagggaag cttttgaata cgtacagacc
     3781 ttggtggcag aagatacgcc tttgacggag caggttgtaa aggatattca ctatctggtt
     3841 ttgtccgata agaaggacga taggggtgtc tatcgaaagg tgcccgttcg tatcatgggt
     3901 gctgcaaacg aacctgccca gccttttatg atccgtccct tgatggagca gtggttggcg
     3961 gactatgctc agtgtcagga aaacatcgtg accaagatgg ctcgttttca cattgccttt
     4021 gaaagtattc atccctttat tgatggcaat ggtcggactg gacggctctt agtgaacttg
     4081 gagctgatga aggctggctc tcctcctatt gatattaaag tttcagatcg attagccaat
     4141 tatcaggcct ttgatgactt ctatgctaag ggaagtctgt cagcaatgga agatttgttt
     4201 gcccgttatt taaacgagag gttggatatg tatctgtcta tcctctccct cgatgatgta
     4261 gagtaagtac aaggaagaat aaggaatacc tatggctcat tttgacctta cagaacgtta
     4321 tgattttcag cagtggatta tcacggattt agaaacagaa aatggtttta ctcacagacc
     4381 gcagagcaag tataatcagc gcttggcaat ggatacagac atcttgtggg agtttctgcg
     4441 agcaacccaa gaagacgaga tggactatct cttgaagaag ttggacaaag aggttattct
     4501 caacttgatt aaccaagaaa ttatcaaggg aggtcttctc tttgccttga agtcaggg
//
LOCUS       DASFQD010000151         4281 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.154, whole genome shotgun sequence.
ACCESSION   DASFQD010000151 DASFQD010000000
VERSION     DASFQD010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4281)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4281)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4281
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.154"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..3357
                     /locus_tag="U1021_002068"
     CDS             <1..3357
                     /locus_tag="U1021_002068"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712558.1"
                     /translation="NENLNQWQGTGVTIVDGKARIIGELNKTKYIYQSIKSQIANDDV
                     SQVYIASISVKVTNYVAGSINPFLALYISGRKNDSVKTWFGATYLTAARLEAVNNRGV
                     VQFTTTFKVNVPRSQIGSMEFNIYARDFTGEVEFEKVSLRRGDIDLGWQASPEDLRSE
                     IASYKRTADEASAELSRQIQLADGKAVDAKTYAQQTATAINTRLESLETYKNAEGARV
                     EQYLTASREETARQLTAERTAIATNYVAKSTYDENVRGTTLKLNEIKTTADTAKQNLA
                     VYQNTVDRKLEELTSSTQTLDGKINTASAKVDTVAGQIRTEISEVEGKIPTEIGGKNL
                     LINNKMATYSGHSMSSRTTERLAGRGAWYIEYKVDFKPNTDYTLSCESIVKNNGDFNN
                     LRIRIFDSSVTIKKMNWLDFNGLLNFRTSDNIVSGDKLLIYVSYSNVSDYEIIKLKLE
                     ETRVKSAYSPAPEDLIDELSSVKTTITQTASGVEQLSTSLSATNSKVTTAETNIRQLV
                     NDVSSKVSQTDYNTLTGRVDSAETAITQNATEISKRLTSTQVESAITGKGYQTKSQVD
                     DNITGRGYITNSALQPYALSTTVQNLVQETADSFSRTISRVENKIPTKIGVTNLLGGT
                     SSDWKTIRVTQYNGLIKSYNPQEWALLGIKTGDSVTFSVDVKTTSGKKLRSRISFYGA
                     NTHYYSEAFVVNGEGRLSVTGVVPDGITSVRLFVDANLTVATNTGVTEESCRREKLEI
                     GAIATDWSPAPEDLATVTALHSVRDTVDSHTRTIGAVGTTGSILDNVSKVTQTAAGLV
                     QEVSGTNGLKTQVSTLAGSYAIKSLTKAGDVLGQINLNKDGSIKIDGSLVQITGKTYI
                     QDGVITSAKIGSLDAGKLTAGYISSNRFQADSITGDKLVMDSAFFNKFAADEAKLKQL
                     FAKNAFITQVQAVNLSAKQIAGGIAKALNGGMDVNFDESKINFYTNVAAIRRIYTGHP
                     TQFIKFETEGNYSRTIIGSNRNGGEVFNSATFAGIVVENTNNINTEDNVRVYGDNTLF
                     RHAQGDVGWNINSVTQRIVPANINAESEIWSKHFVAPDKNSKPVRLDTAVAALWDIWN
                     HIIYNNFEFNEALRTHIKARRDNWKFELNL"
     gene            3366..3563
                     /locus_tag="U1021_002069"
     CDS             3366..3563
                     /locus_tag="U1021_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001071121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712559.1"
                     /translation="MNQALALTNQELANQLAEEKNTKNLLAVQLTEAQQTIAGLQAEI
                     TELTKQLDEATKPAEEIIEGE"
     gene            3566..3910
                     /locus_tag="U1021_002070"
     CDS             3566..3910
                     /locus_tag="U1021_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712560.1"
                     /translation="MTETTNNTLLDLSTITEPFDLATALQYMKENGEFIRCKNATNDF
                     YMYRDVQRRPGIVNGRRQFVEVETVWAFNQWGGTTTTINVADLFNEEFYIMQFDENGN
                     PDWTEPTAGVEA"
     gene            3914..>4281
                     /locus_tag="U1021_002071"
     CDS             3914..>4281
                     /locus_tag="U1021_002071"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712561.1"
                     /translation="MPDQILHIIGAVAPTIGVIATGGFGYLAARSNNLNKAQFGELKQ
                     GMEDIKDDVSNLKKVADDNQVSLVAVQEEIDTLKNSGRSSRRYTLYKDLDTAIARGWT
                     TLEERREIAKLFDSYKILGG"
BASE COUNT         1409 a          842 c          985 g         1045 t
ORIGIN      
        1 aacgaaaact tgaaccaatg gcaaggaact ggagtgacta tagttgatgg taaagcgaga
       61 attataggag aacttaataa aaccaagtac atttaccaaa gtatcaagtc tcagatagct
      121 aatgacgatg ttagccaggt atacatagca tcaatctcag ttaaggtcac taattatgtg
      181 gctggttcta taaatccatt tcttgcgctg tatataagcg gtagaaagaa cgacagtgta
      241 aaaacatggt ttggcgcaac atatttgaca gccgcccgct tggaagcagt caataataga
      301 ggagttgtgc agtttaccac tactttcaaa gtaaatgtgc cacgtagcca gataggcagt
      361 atggagttta atatctatgc aagggatttc acaggggaag tggaatttga gaaagtgtca
      421 ctcagacgtg gggatattga tttaggctgg caagcttctc cagaagacct ccgctccgaa
      481 atcgcaagtt ataagcgtac agcagatgaa gcaagcgcag agttatcccg tcaaatccaa
      541 ctggcagatg gaaaggcagt agatgctaag acctacgctc agcagacagc gactgcaatc
      601 aatactcgat tagagagcct agaaacctac aagaacgcgg aaggggctag agttgagcag
      661 tatttaactg ctagtcggga ggagacagcg agacagttaa ctgccgagcg taccgcgatt
      721 gctactaact acgttgctaa gtctacctat gacgaaaatg tccgcggaac aacgctaaaa
      781 cttaatgaga ttaagacgac cgctgatact gctaaacaaa atttagcagt ctaccaaaat
      841 acagtcgaca gaaagctgga agaattgacc tcaagtacac agacgctgga tggcaaaatc
      901 aatactgcaa gtgccaaggt cgatacggta gccgggcaga tacgtactga gattagcgag
      961 gtggaaggga agataccgac ggaaatcggt ggcaagaact tactaatcaa taataaaatg
     1021 gctacatatt ctggtcattc tatgtcaagt agaacaacag aaagattggc cggaagagga
     1081 gcttggtaca ttgagtataa agtagatttt aaacctaata cagactatac actatcatgt
     1141 gaatccattg tcaaaaataa tggtgatttt aataatttaa gaatcagaat tttcgattct
     1201 tccgtcacca taaaaaaaat gaattggcta gattttaatg ggctattaaa ttttagaacc
     1261 agcgataata ttgtttcagg cgataaactt ttgatctacg tatcatacag taatgtaagt
     1321 gattatgaga tcattaagtt gaaacttgag gaaactcgtg ttaaatcagc atactctcca
     1381 gcccctgaag atttgattga tgaactatca tctgtcaaaa ccacaatcac tcaaactgct
     1441 tcgggtgtcg agcagttgtc gacaagccta tctgcaacta atagtaaggt cacgactgct
     1501 gaaaccaaca tccgacagct ggttaacgat gtatcaagca aagtatcgca aacggactac
     1561 aatacgctga ctggccgagt tgatagtgct gagactgcca tcactcaaaa tgcgactgag
     1621 attagcaagc gattgactag tacacaggtc gagtcggcaa tcactggcaa aggctaccag
     1681 accaaatcac aagttgatga taacatcaca ggtcgtgggt atatcactaa tagtgcatta
     1741 cagccttatg cgttatctac gactgtgcaa aatcttgtgc aagagacggc agatagtttt
     1801 agtcggacga taagtcgggt tgaaaataaa attccaacaa agataggtgt cactaatttg
     1861 ctaggaggca ctagcagtga ttggaagacc attcgtgtca cacaatacaa cggtttaatc
     1921 aagtcttaca atccacaaga gtgggcgttg ttaggtatta agactggcga ttccgttact
     1981 ttttctgttg atgtaaaaac cacatcaggc aagaaacttc ggtcacgcat ctccttttat
     2041 ggagcaaata cgcattacta tagcgaagct tttgttgtca acggagaggg acggttgtct
     2101 gtgacaggag ttgttccaga cggtataaca agcgtacgat tatttgtaga tgcaaatctt
     2161 acggtagcga ctaacacggg agttacggaa gaaagttgtc gaagggagaa actagaaata
     2221 ggtgctatcg caacagactg gtcaccagca cctgaagacc tcgctaccgt cacagccctg
     2281 cactcagtcc gtgacacagt cgacagtcac actcgtacta tcggcgcagt cggcacgact
     2341 ggaagcattt tggacaacgt cagcaaagtt actcagactg cagcaggtct ggtccaagag
     2401 gtgtctggca ctaatggact taagacacaa gtcagcacgt tagcagggtc ttatgctatt
     2461 aaaagcctga caaaggctgg cgatgtgttg ggtcagataa acctaaacaa agatggctct
     2521 attaagattg acggtagtct cgtacagatt actggtaaga catacatcca ggacggtgtg
     2581 attacatctg ccaaaattgg tagcttagat gctggcaagc taacagcagg atatatttct
     2641 agcaatagat ttcaagcaga ctctatcacg ggtgataagt tggtaatgga ttcagcattt
     2701 tttaacaaat tcgcagctga cgaggctaaa ctaaaacaac tatttgctaa gaatgccttc
     2761 atcacacagg tacaggctgt gaacttgtca gctaagcaga ttgctggcgg tattgctaaa
     2821 gctctcaacg gtggtatgga tgtcaatttc gacgaaagca aaattaactt ttacacaaac
     2881 gtagctgcaa taagacgtat ctatactgga caccctactc aatttataaa attcgaaact
     2941 gaagggaatt actcgcgaac aatcatcggg agcaatcgga atggtggaga agtttttaac
     3001 tctgcaacat ttgcggggat tgttgtggaa aacacaaaca acataaacac agaagataat
     3061 gtaagagtct atggagataa cacgctattc aggcacgccc aaggtgatgt cggttggaat
     3121 atcaattctg ttactcaacg tatagtccct gccaacatca atgcagagtc cgaaatttgg
     3181 tctaagcact ttgtggctcc agataaaaat tcgaagcctg tccgattgga tacagcggtg
     3241 gcagcgttat gggacatatg gaatcacatt atttacaaca actttgagtt taacgaagcg
     3301 cttcgtaccc acataaaagc tagacgggac aactggaaat ttgaattaaa tttataggag
     3361 gaatcatgaa tcaagcactc gctttgacaa accaagaact agccaaccaa ttggcagaag
     3421 agaagaacac taagaacttg ttagctgtcc agttgacaga agctcagcag accatcgcag
     3481 gtctgcaggc agaaattact gagttaacaa agcaactgga cgaagctact aaaccagcgg
     3541 aagaaatcat cgaaggagaa taatcatgac tgaaactact aacaatactt tactcgactt
     3601 atcaaccatt acagaaccat ttgaccttgc gactgcattg cagtacatga aggaaaacgg
     3661 ggaatttatt cgctgtaaaa atgcgacaaa tgatttttat atgtaccgtg atgtccaacg
     3721 tcgaccaggt attgtcaatg gtcgtcgtca attcgtagaa gttgaaactg tgtgggcctt
     3781 taaccagtgg ggcggaacta caacaacaat caatgtggca gatctcttca acgaggagtt
     3841 ctacatcatg cagtttgatg aaaacggaaa tccagattgg acagaaccaa cagctggagt
     3901 ggaggcgtag cctatgccag atcaaatctt gcacatcatc ggagcggtgg cacctactat
     3961 tggtgtcatc gctactggtg gttttggcta tcttgcagca cggtctaata atctaaataa
     4021 ggcacaattc ggcgaactca agcagggtat ggaagacatc aaggatgatg tgtccaactt
     4081 aaaaaaagtc gcagacgaca accaagtcag cttagtcgct gtccaagagg aaattgacac
     4141 tttgaaaaac agcggtagaa gtagccgtcg ttatacgtta tacaaggatt tggacacagc
     4201 aattgcccgt ggttggacaa cgctggaaga acgtcgagag attgccaagc tttttgatag
     4261 ttataaaatt ttaggcggaa a
//
LOCUS       DASFQD010000152         4203 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.155, whole genome shotgun sequence.
ACCESSION   DASFQD010000152 DASFQD010000000
VERSION     DASFQD010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4203
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.155"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(959..1597)
                     /locus_tag="U1021_002072"
     CDS             complement(959..1597)
                     /locus_tag="U1021_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM4712562.1"
                     /translation="MLIHKSVNPVAVQNTYYVENDSHLLVVDPGSDWTKIQATIEKIG
                     KPISAILLTHTHYDHIMSLDILRKTYNFPPVYVAESEASWLYTPEMNLSGLPRHDDME
                     NVVCRPAEKIFQYQEDYQFDGFHFKVVPTPGHSIGGVSFIFPEDECVITGDALFRETI
                     GRTDLPTSNFDDLITGIREHIFTLPNHYTVHPGHGQNTSVGHEKNFNPFFRM"
     gene            1706..4174
                     /locus_tag="U1021_002073"
     CDS             1706..4174
                     /locus_tag="U1021_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DnaQ family
                     exonuclease/ATP-dependent helicase"
                     /protein_id="HEM4712563.1"
                     /translation="MNSMKDRRTSNRYAVVDLEATGTGADAKIIQIGIVLVENGEIID
                     SYATDINPYELLDDHIKNLTGITDQQLSQAPDFGQVASTIYDMIGDAIFVAHNVKFDA
                     NLLAEALFFEGYELLTPRVDTVELSQLFFPTFEKYSLGNLAEHLELGLDQAHTAISDA
                     LATARLLIKIQEKIKSLPRSIVEKILDLADNLLFESRLVIDELVPYLSETISTSLESV
                     HGLVLKKPEEIKSAYRLSEDFSTNIALLGLHERKKQTAFVQVVEKRLVDEEKVHFIQA
                     QAGLGKTYGYLLPLLAKSDQPLLVTVPTKLLQEQIMEKEGGKLKEIFRIPVVSLKSHK
                     HFIKLDNYWKTLQRQDDNRLVNQFKMQVLVWLCETTTGDLDELKQKQRYQAYFDEIAH
                     DGKLEPESLFWGWDFWQRLNHQALYSRLLITNHAYFFSHLKDQDPLMDKRLVVIDEAQ
                     KFLLAAENLATASQDLTSMLQVLQSKKDRATTILDQRLYESCQFELNHLLTRFRQHGQ
                     REVSKDELGQVKQNLAELQDIDLQDLDQLLDIYDHFWLEEKYLDDKRIAYLRGSKDSL
                     LNVTNYLPDTKIFCISATLTISKKVSLADLLGFEQVTMDLLPTQAVTNQQLLFPTHLP
                     DILAWTKEEHAAYLATTLGEIAELGRPILVLFTSISLLLQVSDLLEGNNIPHLAQHKH
                     GQEMTLKRKFERGECQILLGTGVFWEGVDFASQDQLVQVITRLPFDNPKDQFVQKINH
                     HLREEGKNPFYDYSLPMMMIKLKQAMGRTNRHDNQDSIVLVLDPRIHTKRYGQQILTF
                     FEKDYSMLSVDAKEIEGAIQDFFE"
BASE COUNT         1263 a          813 c          942 g         1185 t
ORIGIN      
        1 gaaaagcgac aaaacttaca ttagaaagag gtcatataga ataaatcaag agttagggga
       61 gtgactcttg attcctgagc ctagaaatag aaaagcgaag atcttatcac aaattttctt
      121 ggaatagaag acaaaaatat cgctatcatg actgaatatg atgtggaaac tcacttagat
      181 tgtgtgtctc caaaatgtct tgcctgaaag ggacaaatag tgaaatacaa cttccaaaga
      241 gcatctaaaa tcctttgctt agaagcagct gataatcctc tctccttatc catcttagaa
      301 agcgtcggtt caagtgtaaa ggatgcggga aaatggttgt cgctgaaatt cacttattaa
      361 aaaaatgacc aaatctctgt tgctattaac cagaaaaaac cccaattact actcgttgag
      421 aatcaagcaa tgagtaagca atgttcacct gatactattg tcatcaagga tagcttttct
      481 atcctattcg gaactataaa gtaagagttt ttgaaggggg tagatattgg ttgcatgtat
      541 tgaaaaactt gtggttccat ggtttttaaa gttactctat ctggctatat tttgaactat
      601 gttattacac cagtttctga ttatgtagtg aattgcttgt tggaaggcta tcagtaatct
      661 gtgattttag cagatttagt caggagttta aagacaactt ggaacagaag gatagaacat
      721 ggaaggagtt aattagtata acaaatggag attattagcc atgaggcgaa ccattgaaac
      781 tcgttttctg aatcatacgc tttgtttgat atagaacaaa cctttgccag aggactgctc
      841 ggattacagc tacggattga acaaatccta cttatctaca atctaagcta ttttgacttt
      901 aactagtagc acgggtaaaa aaactgccta gttcaatcag aactgggcag tacttatttt
      961 acattctaaa aaatggatta aaatttttct catgtccaac gctggtattt tgaccatgac
     1021 ctggatggac ggtgtagtgg tttggcaggg tgaagatatg ctctctgatg ccagtaatca
     1081 ggtcatcaaa gttgctggtt ggcaggtcgg ttcgaccaat tgtttcacgg aaaagtgcgt
     1141 ctccagtgat gacacattca tcctctggga agataaagga tacgccaccg atggagtggc
     1201 ctggtgttgg cacaaccttg aaatggaaac catcaaactg gtagtcttct tggtattgga
     1261 agattttttc agcaggtcgg cagactacat tttccatatc atcatgacga ggtagacctg
     1321 atagattcat ctctggtgtg tagagccagc tggcttcact ttcagccaca tagacaggcg
     1381 ggaaattgta ggtcttacgc aggatgtcca aactcataat atggtcatag tgagtgtgag
     1441 tcaggagaat agccgaaatt ggttttccga ttttttcgat agttgcttga atttttgtcc
     1501 agtcactccc agggtcaaca acaagcaggt ggctgtcatt ttcaacgtag taggtatttt
     1561 gaacggcaac agggttgaca gatttatgaa taagcatggt atttctcctc acagaaacag
     1621 tttttatatt agtagtctaa caaaaaaatc cagtgaattc atggattttg tttgaggctt
     1681 tttcagtggg agcgaatgtg ctataatgaa cagtatgaaa gacagaagaa caagcaatcg
     1741 gtatgccgtt gtggatttgg aagcaactgg tacaggtgct gatgcaaaaa tcattcaaat
     1801 cgggattgtt cttgttgaaa atggagaaat cattgatagc tatgcgacgg acatcaatcc
     1861 ctatgagcta ctggatgacc atatcaagaa tctgacaggt atcacagacc aacagctaag
     1921 tcaggctcca gattttggtc aggtagcaag taccatttac gacatgattg gagatgctat
     1981 ttttgtagcc cataatgtca aatttgatgc caatctcttg gcagaagcac tcttttttga
     2041 aggctatgaa ctgttgacac cgcgtgtaga tacggtagaa ttatcacagc tatttttccc
     2101 gacttttgaa aaatacagct tgggaaatct tgcagagcat ttggaacttg gtttggacca
     2161 ggcacacacg gctatttcag atgctctggc aacggctcga cttcttatca aaattcaaga
     2221 gaaaataaag agcttaccca ggtctattgt tgaaaagatt cttgatttgg cggataatct
     2281 gctctttgaa tcccgtctgg tcattgatga actggtgcct tacctgtccg aaacgatttc
     2341 gaccagttta gaaagtgttc acggcttggt cttgaaaaag ccagaagaaa tcaagtcagc
     2401 ctaccgatta tctgaagatt tttcgaccaa tattgccctt ctcggcttgc atgaacgaaa
     2461 aaaacaaact gcttttgttc aagtagtaga aaaacgcttg gttgacgaag aaaaagtgca
     2521 ttttatccaa gcgcaggcag gtttggggaa gacttacggt tatctcttgc ctttacttgc
     2581 taagtcggac cagcctctct tggtgacggt gccgaccaag ctccttcaag agcagattat
     2641 ggaaaaggaa gggggcaagc ttaaagagat atttcgtatt cccgtagtct ctctaaaatc
     2701 gcacaagcat tttatcaagt tagacaacta ctggaaaacc ctgcagaggc aggatgataa
     2761 tcgcctggtc aatcaattca aaatgcaggt gcttgtctgg ttatgcgaaa ccacgacagg
     2821 tgatttggat gagcttaagc aaaaacaacg ctatcaagct tactttgatg agattgccca
     2881 cgatgggaaa ttggagcctg aaagtctttt ctggggctgg gatttttggc aacgattgaa
     2941 ccaccaagct ctctatagta gactgctcat taccaaccac gcttactttt tcagccatct
     3001 taaggatcaa gaccctctca tggataagcg tctggtggtg attgatgaag cacaaaagtt
     3061 tctcttggct gctgaaaatc tagcgacggc ttcgcaagat ttgacaagta tgttacaagt
     3121 attgcaaagt aaaaaggaca gagcgacgac tattttggac caacgtttgt atgagtcgtg
     3181 ccagtttgaa ctcaaccacc ttttgacccg ttttcgccag catggacagc gagaagtttc
     3241 aaaagacgaa ctgggtcaag tcaagcagaa tctggctgag ttacaagata ttgacctaca
     3301 agacttggac caactccttg atatctacga ccatttttgg ctggaagaaa agtatcttga
     3361 tgacaagcga attgcttatt tgcggggctc caaggacagc cttttgaatg tgaccaacta
     3421 cctgccagac accaagattt tttgcatcag tgccaccttg accatcagca aaaaggtcag
     3481 tctggcggat ttgctgggct ttgagcaggt caccatggac ttgcttccga cccaggcagt
     3541 gaccaatcag cagctgcttt ttccgaccca tctccccgac atcctcgctt ggaccaagga
     3601 ggagcatgca gcttatttgg ctactacttt aggagaaata gcagagctgg gacgaccgat
     3661 tttggtcttg ttcacatcga tttctctgct cttgcaggtg tcggatttgt tagaaggcaa
     3721 taacattccc cacctagccc aacacaagca tggccaggaa atgactctca aacgaaaatt
     3781 tgaacgagga gaatgccaaa ttttactcgg cacaggtgta ttctgggagg gcgttgactt
     3841 tgccagtcag gaccaattgg ttcaggttat tacaaggctc ccattcgata atccaaagga
     3901 ccagtttgtg caaaaaatca atcaccatct gcgtgaagaa gggaagaatc cattttacga
     3961 ttacagcctg cctatgatga tgattaagct caaacaagcc atgggtcgga ccaatcggca
     4021 tgataaccaa gattctatag tcttggtttt ggatccgcgt atccatacca aacgctatgg
     4081 acagcaaatt ctcacctttt ttgagaaaga ttattcaatg ttaagtgtgg atgcgaaaga
     4141 aatagaagga gctattcaag atttttttga ataagttgaa agggagtgag aaagaactcg
     4201 act
//
LOCUS       DASFQD010000153         4161 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.156, whole genome shotgun sequence.
ACCESSION   DASFQD010000153 DASFQD010000000
VERSION     DASFQD010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4161)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4161)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4161
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.156"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            88..498
                     /locus_tag="U1021_002074"
     CDS             88..498
                     /locus_tag="U1021_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712564.1"
                     /translation="MKTRLSIKKPIIVAIALLGLVSPTVFSRGVLDYSMVLPRIGSTT
                     TGSIVKVTHSRGVNRNDSTGGGKTLNTSIRNYHSGSDITPTYSLPSGARVLMSYHGSG
                     SHYVNETTTLGLATQFGNTVRVQTTGSWSPDEEQ"
     gene            583..1347
                     /locus_tag="U1021_002075"
     CDS             583..1347
                     /locus_tag="U1021_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712565.1"
                     /translation="MKFLLMNVRRTVFSKKMLLSFLLAFSCILIGNMVAFNGIYKLEG
                     LSLFFAGSTIRGFSPISLVAAVISAIPIADRVIEDSKNHFLRLQLQRTSRIKYIWTLL
                     VTAGISGFLSLFLPYFLLLVANLCLTPYKEIYIGDYQGVFKSIFDSNQLVYSILITIW
                     YGIFGSVFAVFGLASSLAFRQKIVGVFFPCLYMILGGLFFALLDLSFLEPVGIISWGY
                     QFQLNFLLVFLHLLCIFTICLGMILYHFQFRVEDSI"
     gene            2111..2842
                     /locus_tag="U1021_002076"
     CDS             2111..2842
                     /locus_tag="U1021_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712566.1"
                     /translation="MRESSIIKNSLFWEWRCLTTSSQFYIYLILSGMYYLLLALLNFF
                     EVGFGEYLLKGPGLDGIETISLLSYLLFQAQNIFLLQQLFSGLSTTNFNLTILRIGSI
                     KDWFLVKLVSLIFLSLLLGLFQTVPLFFIGNMDYLFFLHFFVVNSTNFILFSSLLFLL
                     FHFDFSDAVSFCITYSLLVFIIFSGEILGENTNYFVTILARVAEYEKNSNLSLFIAIF
                     FEIILSAAILSFIKIRYSLGGKIHE"
     gene            2835..3476
                     /locus_tag="U1021_002077"
     CDS             2835..3476
                     /locus_tag="U1021_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712567.1"
                     /translation="MNNSIIKIENLSKKFKNCDLFDNLHFECSEGEIVGITGINGSGK
                     SVLFKLIAGLMQPNSGTIKVYGEDIVGKIPSGLGALIEEPGFIPNYSGFENLEFLSTI
                     QNIIGKEEILATLHRVGLFEDKDKKVRNYSLGMKKKLGIAQAIMEEPRILLLDEPTNA
                     LDSQSVQRVYDLLKELSKEKGVTVLLASHNDSDIRHLCDKVYLLENKQCKLLK"
     gene            3731..4000
                     /gene="rpsO"
                     /locus_tag="U1021_002078"
     CDS             3731..4000
                     /gene="rpsO"
                     /locus_tag="U1021_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001018251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEM4712568.1"
                     /translation="MAISKEKKNEIMAQYARHEGDTGSVEVQVAVLTWEINHLNDHIK
                     QHKKDHATYRGLMKKIGRRRNLLAYLRRTDVNRYRELIHSLGLRR"
BASE COUNT         1213 a          643 c          780 g         1525 t
ORIGIN      
        1 cttgatattt tttaccatac ttgatataat ttacatatca atataaacaa cttccttata
       61 aggttttcat gaaaggagaa gattcacatg aaaacgagat tatctataaa aaagccaatt
      121 atcgtagcaa tagcattatt gggattagtt tctccgacgg ttttttcaag aggagtacta
      181 gattattcca tggtcttacc acgtatagga tctacaacaa ccggtagcat agtcaaggtg
      241 actcattcgc gaggagtgaa tcgcaatgat tctacaggtg gtggaaagac tttaaatacc
      301 tcaatacgaa attaccacag cggtagtgat ataactccga cctattctct tccatctggt
      361 gctagggttc tcatgtctta tcatggaagt ggtagtcatt atgtcaatga aacgactact
      421 ttgggattag ctactcaatt cggaaataca gttagagtac aaacgactgg cagttggagt
      481 ccagatgaag aacagtgatt agtaatgagc taggaagttg tttattgaga ctattgagct
      541 agtggaattt attcacctag ctctttttac taggaggtaa aaatgaaatt tttactaatg
      601 aatgttagaa gaactgtttt ctctaaaaag atgcttttgt cttttctctt ggcattttcc
      661 tgcattttga tagggaatat ggttgctttt aatggcatat acaaacttga aggattgtcc
      721 ctgttttttg caggatcgac tatcaggggt ttttcgccga taagccttgt ggcagcagtt
      781 atcagtgcga ttccgatagc tgatcgggtt attgaggata gtaagaatca ctttctgcgc
      841 ctgcaattac aaagaacatc ccgtataaaa tatatttgga ctcttcttgt gacggcagga
      901 atttcaggat ttttgtccct ttttttaccc tatttcctgc ttttggttgc aaatctatgt
      961 ctgacgccat ataaggaaat atatattggt gactatcaag gtgtttttaa gtctattttt
     1021 gatagtaatc agttagttta ttctatctta ataacgatat ggtatgggat ttttggtagc
     1081 gtttttgcag tatttggcct agctagttct cttgcttttc gtcaaaaaat tgttggggta
     1141 tttttccctt gcctctatat gattttgggc gggttgtttt ttgccttgct agatttgtct
     1201 tttttagagc ctgttgggat tatttcttgg ggttaccagt ttcaattaaa ttttctactt
     1261 gtatttttgc atctactgtg tatttttacc atctgtcttg gaatgatttt atatcatttt
     1321 cagttccgag tggaggatag tatatgagat tttgtagaat tctatttttt cataaaaaat
     1381 ctactatctt cagattattt tttatcatct tacttgggag tttgattttt tcaaatacca
     1441 cctatcaata ttatttaggt cattatcaac ttgttccaaa tgtttttacc tggctactga
     1501 ttctatgcca agatataaca acaggtgtct acctgatacc gattatctac actgctattt
     1561 tatttttttg tatagaagtt tttacaagag atacatttgt cacactgcgt tttttatcca
     1621 tcaaagataa gtattacttt ttattaaatt atagcttgct acttccattc ttatttgtat
     1681 ttcttctgat gtgtctggta tttttgatgg ggttggtaaa ttcgttttct ttttcaattt
     1741 cttctataca tcaaccactt ctatcagaag tttatgaaat atcttacgtt tctaattttc
     1801 aaagtatact tttgcccttg tttagttttt tatgttatct tattttcctc tcggaaatag
     1861 ccttgtttaa ttttcttctt tttcaaaaag gaagtacagt catggctaat cttttctcat
     1921 ttttgttaat acaatctgtt ttctggtttt atccgatcaa tgcaaccatt agtcaagtct
     1981 ttcctatcca tcactatatt ttaaaatcag taagttacca caaggagtta ttgtattggc
     2041 taattctctt gctttttttc attttgttaa acctatataa aataagaaat acagagtggg
     2101 aggaatagga atgagggaga gttccattat aaaaaattct ttattctggg aatggcgttg
     2161 tttgactact agctctcagt tttatattta tctaatttta tcagggatgt attacttatt
     2221 gttagcgcta ttgaattttt ttgaagtcgg cttcggtgag tatcttctaa aaggtcctgg
     2281 gttggatggc atagaaacca ttagtctact ttcttaccta ttgtttcaag cacagaatat
     2341 ttttttgttg caacagctat tttctggttt atcaacaaca aacttcaact taacgatact
     2401 aagaattggg agtataaaag attggtttct tgtcaagctt gtgtccttga tatttctatc
     2461 acttttattg gggttgtttc aaacagttcc tctgtttttt ataggtaata tggactattt
     2521 gtttttcttg cattttttcg tagttaatag cactaatttt attttgttca gttcattgct
     2581 ctttttattg ttccattttg atttttcgga tgctgtctcg ttttgcatta cttattcttt
     2641 actcgttttt atcatttttt caggagaaat tttaggagaa aatacaaatt atttcgttac
     2701 gatattggca cgggtagctg agtatgagaa aaattcaaat ttgtcacttt tcatcgctat
     2761 attctttgag attatactaa gtgcggcgat actttctttt ataaagatca gatattcttt
     2821 gggaggtaaa atacatgaat aatagtatta taaaaattga aaaccttagc aaaaaattta
     2881 agaattgtga tttatttgat aatttacact ttgagtgttc ggaaggggaa atagtaggga
     2941 taactggtat aaatggttcg gggaagagtg ttctgttcaa attgatagcg ggccttatgc
     3001 aaccgaattc tgggactatc aaggtgtatg gagaagatat tgtcggaaag attccatctg
     3061 gtttaggagc attaattgaa gaaccaggct ttattcccaa ttatagtgga tttgaaaatt
     3121 tagaattttt atcaactatc caaaatatca ttggtaagga agaaatactt gcaaccttac
     3181 atcgtgtagg actctttgaa gataaggata aaaaggttag gaattactct ctcggtatga
     3241 agaaaaaatt aggaattgca caggctatta tggaagagcc tagaatcctt ctattggatg
     3301 agccgacaaa tgctttggat agtcagagcg ttcagagggt gtatgacttg ctaaaagaac
     3361 tttcaaaaga aaagggtgtt acggttttat tggccagtca taatgatagt gatattagac
     3421 atctatgtga taaagtttat cttctcgaaa ataagcaatg taagttattg aaatagaaat
     3481 aatttatgaa ttgtgcattc agttttgtac aaaattcgtg actattttga cggtacggct
     3541 aatttgtaaa ggtgaatttg aaaaagaata gagaaagtct actcggttta ttggaagata
     3601 atatcagttg acaaaagagt tattccttga tagaataaat gaggtccaaa aaggacaaat
     3661 ctagcttttt cttggttaca ggtcgccaac ctgtcactcg gattaggctc aaaacaaagg
     3721 agaacatatc atggcaatct caaaagagaa aaaaaatgaa atcatggcac aatatgctcg
     3781 tcatgaaggc gacacaggtt cagttgaagt acaagtagca gtacttactt gggaaatcaa
     3841 ccaccttaac gaccacatca aacaacacaa aaaagaccac gcaacttacc gtggtttgat
     3901 gaaaaaaatc ggtcgccgtc gtaacttgtt ggcataccta cgccgcacag acgtaaaccg
     3961 ttaccgtgaa ttgattcact cactcggact ccgtcgttaa tataggaaac tgccatgtct
     4021 tcggacattg gcagtttttc ttatgttcca ttatggaagt gtagtgctcg gaaaaagctg
     4081 ggtgttctgt aagcgcccaa taacaaggta tattgaaaaa ggctccaaag tcctgtcgac
     4141 ctggaacctt ttttatacta a
//
LOCUS       DASFQD010000154         4152 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.157, whole genome shotgun sequence.
ACCESSION   DASFQD010000154 DASFQD010000000
VERSION     DASFQD010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4152)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4152)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4152
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.157"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..780
                     /locus_tag="U1021_002079"
     CDS             <1..780
                     /locus_tag="U1021_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM4712569.1"
                     /translation="IGSWLGLGIVGTALGTVLARFLGTVLLYRKVQQTDLAVDLKQLF
                     HLGSPKEMVDLTLPAAAERLVMRLGQVVYFSLIVGLGTTVYASHMIAGNIESFTYMPA
                     YGLATAAAVLIGQALVKGDILTVRRVAFLSSAYGVAIMFLLGTILFFGAPSFALLFTK
                     DLEAVHQVVTALRIDAFNQPGLAVSLNMAGALQGLGDTKSPLYSTVIGMWGLRVVGAI
                     VLGQMFGLGIAGVWLSILIDLLLRAIFLTWRFHVKTRKLAE"
     gene            964..1341
                     /locus_tag="U1021_002080"
     CDS             964..1341
                     /locus_tag="U1021_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEM4712570.1"
                     /translation="MKTIHTDKAPAAIGPYVQGKVVGNFLFASGQVPLSPETGEVVGE
                     TIQEQTEQVLKNIAAILSEAGTDFDHVVKTTCFLKDMNDFVAFNKVYKTAFSADFPAR
                     SAVEVARLPRDVKVEIEVIAVID"
     gene            1363..2250
                     /gene="rapZ"
                     /locus_tag="U1021_002081"
     CDS             1363..2250
                     /gene="rapZ"
                     /locus_tag="U1021_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002933011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEM4712571.1"
                     /translation="MSDKLHLVIVTGMSGAGKTVAIQSFEDLGYFTIDNMPPTLLPKF
                     LELIRHSQDNNKIALVVDMRSRSFFSEIREVLDEIEGAEDLDFKVLFLDATDNELVAR
                     YKETRRSHPLAADGRVLDGIQLERELLAPLKNMSQNIIDTTELTPRNLRKAISEQFAS
                     QDNQPSFRIEVMSFGFKYGLPLDADLVFDVRFLPNPYYKLELRNLTGLDAPVFDYVME
                     HQESEEFYSHLLGLIEPILPGYQKEGKSILTIAVGCTGGQHRSVAFAKRLADDLEKNW
                     NVNRSHRDKDRRKETVNRS"
     gene            2247..3221
                     /locus_tag="U1021_002082"
     CDS             2247..3221
                     /locus_tag="U1021_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YvcK family protein"
                     /protein_id="HEM4712572.1"
                     /translation="MRKPKITVIGGGTGIPVILKSLRDKDVEITAIVTVADDGGSSGE
                     IRQALQVTPPGDLRNVLLAMSDMPKLYEQIFQYRFADSDGPLAGHPLGNLIIAGISEM
                     QGSTYNAMRLLTRFFHTTGRIYPSSEQALTLHAIFTDGTEVAGESKISKHNGMIDHVY
                     VTNSYNDDEPKASRQVVETIMESDMIVLGPGSLFTSILPNLMISDIGKALKETKAEVT
                     YVCNIMTQRGETEFFSDADHVAVLNAHLAEQFIDTVLVNIEPVPQEYMNSNQFDEYLV
                     QVKHDFAGLQKQANRVISSNFLRLENGGAFHDGDLVVEELLKILQVRP"
     gene            3218..4135
                     /gene="whiA"
                     /locus_tag="U1021_002083"
     CDS             3218..4135
                     /gene="whiA"
                     /locus_tag="U1021_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein WhiA"
                     /protein_id="HEM4712573.1"
                     /translation="MSFTVQVKEELLLQSSQNKSELSAIIKLSGSLGLASSGLTLSIS
                     TENAKIARHIYELLLHFYQIKAEIRHHQKPNLKKNRVYAVLIEDGVNEILNDLHLADS
                     FFGLETGISPLVLENDSWSQAYLRGAFLAAGSVKDPEKGKYQLEIASVYSDHANDLAN
                     LMQKFLLDAKVIERSKGTITYLQRAEDIMDFLLVIGAEETKTEFENVKLLREARNDLN
                     RATNAEAANIAKTVNASMKTINNIIKIMDTIGLDQLSGDLQEIAQLRIQHPDYSIQQL
                     ADSLTVPITKSGVNHRLRKINKIADELID"
BASE COUNT         1124 a          771 c         1030 g         1227 t
ORIGIN      
        1 attggctctt ggttaggttt ggggattgta gggacagcct tgggaaccgt cttagctcgc
       61 tttcttggta cagtcttgct ttaccgaaag gtgcaacaga ctgacttggc agttgatctc
      121 aaacaattgt tccacttggg aagtcctaag gaaatggtgg atttgacctt acctgcagca
      181 gccgaacgct tggttatgcg gttgggacag gtggtctatt tcagtttgat tgtggggctg
      241 gggacgactg tctatgcttc tcacatgatt gcaggcaata tcgagagttt tacctatatg
      301 ccagcctatg gtcttgcgac agcggcggcg gttttgatcg gtcaagcctt ggtaaagggg
      361 gatatcctca cagttagacg tgtcgcattt ctcagctctg cctatggtgt tgccatcatg
      421 ttcctgctcg gtaccatctt atttttcgga gctccaagtt ttgctctgct atttaccaaa
      481 gacctagaag cagtccatca agtcgtcaca gccttacgga tcgatgcttt caaccagcca
      541 ggccttgcgg tttctttgaa catggctggc gctctgcagg gcttggggga taccaagtcg
      601 ccactctact ccacagtgat agggatgtgg gggctgcgcg tcgtaggtgc tatcgtctta
      661 ggtcagatgt tcggtttagg aattgccggc gtctggctgt cgattttgat tgacctgctc
      721 ttgcgagcga tttttctgac ttggaggttt catgtaaaaa caagaaaact ggctgaatag
      781 gctagttttt gggtataagc aggtagtttt agaagtagat tatggattgc cttatttcat
      841 gttgctgata ctatctcaat tcctttttta taaaagaaaa taggtgtagg atagtagtag
      901 gtgagctgtt ttatacagaa cttgtgctat aatagatata aaaaattaaa aggagataga
      961 gatatgaaaa ccattcacac agataaggca cctgcagcaa ttggcccata cgttcaaggg
     1021 aaggttgttg gaaatttcct atttgcctct ggtcaagttc ctttgtcacc tgaaactggt
     1081 gaagtggttg gtgaaaccat tcaggagcag actgagcaag tcttgaaaaa tatcgcagca
     1141 attttatcag aagcaggaac agacttcgac catgtggtga agacgacttg tttcctaaaa
     1201 gatatgaatg attttgtagc ctttaataaa gtttataaaa cagctttctc agcagatttt
     1261 ccagctcgtt cagcggtgga agttgctcgt ttgccacgtg atgttaaggt tgagattgaa
     1321 gttattgcag ttattgatta gaagagaaaa ggagggaatg tcatgtcgga caaactccat
     1381 ttagtaattg tgacagggat gtcgggagct ggtaagacgg tagccattca gtcttttgag
     1441 gacttgggct attttaccat tgataatatg ccaccgactc tcttgccaaa atttttagaa
     1501 ttgattcgcc acagccagga taacaataag attgctcttg ttgtagatat gcggagtcgc
     1561 tccttcttct cggagattcg agaggtgttg gatgagattg agggggcaga ggatttagat
     1621 tttaaagtcc tattcttgga tgcgacggat aatgaattgg ttgctcgcta taaagaaact
     1681 cgtcgttccc atcctttggc ggctgatggt cgtgttttgg acgggattca gctagagcgt
     1741 gaacttttgg ctcccttgaa aaatatgagt caaaatatta ttgacacgac agagctgact
     1801 cctcgtaatc tccgtaaggc aatctcggag cagtttgcta gtcaagataa tcagccgtcg
     1861 tttcgcatag aagtgatgtc ctttggtttc aaatatggac tacctctgga tgcagacttg
     1921 gtttttgacg ttcggttctt accaaatccc tactacaagt tggagttgcg taatctgacc
     1981 ggtctagatg ctcctgtctt tgactatgtc atggagcatc aagaatcgga agagttttat
     2041 agtcatttgc tcggcttgat agaaccgatt cttcctggtt atcagaagga aggaaaatca
     2101 attctaacga ttgctgttgg atgtacgggt ggtcagcata gaagcgtagc ctttgctaaa
     2161 cgtttggcag acgatttaga gaaaaattgg aatgttaatc gtagtcatcg tgataaggac
     2221 agacggaagg agacggtcaa ccgctcatga gaaaaccaaa aattacagtt atcgggggcg
     2281 gaactggtat tccagtcatt ttgaagagtt tgcgggataa ggatgtagag attaccgcta
     2341 tcgtgacggt agctgatgac ggaggatctt cgggggaaat tcgtcaggct ttgcaggtga
     2401 cccctccagg tgatttgcgt aacgtccttt tggctatgtc ggatatgccc aaactttatg
     2461 aacaaatttt ccagtatcgt tttgcggatt cagatggacc cttggctggt catccactag
     2521 ggaatctcat cattgctggt atttcagaaa tgcagggttc aacctacaat gcgatgaggt
     2581 tgttgacacg ctttttccat acgacagggc ggatttatcc atctagcgaa caggccttga
     2641 cccttcatgc tatttttaca gatgggaccg aggtagcagg tgagagcaag atttccaagc
     2701 ataatgggat gattgatcat gtctatgtga caaattctta taacgatgat gaaccgaaag
     2761 ccagtcgcca ggtagttgaa acgattatgg aaagtgacat gattgtactt ggaccgggtt
     2821 ctctttttac ctcaatcttg ccgaatctga tgatttctga cattggcaaa gccctaaaag
     2881 aaaccaaggc tgaagtgacc tatgtgtgca acattatgac ccaacgggga gagactgagt
     2941 ttttctcaga tgcagaccat gtggcggttc tcaatgctca cctagctgaa caattcattg
     3001 atacagtttt ggtcaatatt gagcccgttc cacaagagta tatgaatagc aaccagtttg
     3061 atgaatactt ggtacaggta aaacacgatt ttgcaggttt gcaaaaacaa gctaatcgtg
     3121 tgatttcttc gaattttctt cgtttggaaa atggcggagc tttccatgat ggtgacttgg
     3181 tggtagaaga gttgctcaag attttgcagg tgcggccatg agttttacag tacaagtaaa
     3241 ggaagaattg ctgcttcagt ctagccaaaa taagagcgag ctatctgcta ttatcaaatt
     3301 atcaggtagt ttgggcttag cttcatcagg tttgactctt tctatcagca cggaaaatgc
     3361 aaagattgcc cgtcacattt atgaactgtt actccatttc taccagatta aggctgagat
     3421 tcgccatcat caaaaaccta atctcaaaaa gaatcgtgtg tatgcagttt tgatagaaga
     3481 cggcgtgaat gagatattga acgatttgca tttggctgat agcttctttg gattagagac
     3541 ggggatttcc cccttggttt tggaaaatga ttcgtggagt caagcctatc ttcgtggagc
     3601 atttttagcg gcaggctctg ttaaggatcc tgaaaaggga aaataccagc ttgaaatagc
     3661 ttctgtctat agtgaccatg ccaatgacct ggccaatctg atgcagaaat ttcttttaga
     3721 tgccaaagtc attgagcgaa gtaagggaac cattacctat ctgcaacgtg cagaggacat
     3781 tatggatttt cttttggtga ttggagcaga agagacaaag acagaatttg agaatgttaa
     3841 attgcttcgt gaagctcgca atgacctaaa tcgagctaca aatgcggaag ccgctaatat
     3901 tgcaaagacg gtcaatgcta gtatgaaaac aatcaataat attatcaaaa ttatggatac
     3961 tatcggtcta gatcagttgt caggtgactt gcaggagatt gcccagttgc gaattcagca
     4021 tccagactat tccattcagc aattggcgga tagtctaacg gtaccgatca ctaaaagtgg
     4081 tgtcaaccat cgtttgcgga aaatcaataa gattgcggat gaattgattg actagatagg
     4141 tatacataga at
//
LOCUS       DASFQD010000155         4106 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.158, whole genome shotgun sequence.
ACCESSION   DASFQD010000155 DASFQD010000000
VERSION     DASFQD010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4106)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4106)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4106
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.158"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(89..1381)
                     /locus_tag="U1021_002084"
     CDS             complement(89..1381)
                     /locus_tag="U1021_002084"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEM4712574.1"
                     /translation="MTSVVVVGTQWGDEGKGKITDFLSANAEVIARYQGGDNAGHTIV
                     IDGTKYKLHLIPSGIFFPEKISVIGNGVVVNPKSLVKEINYLHDSGVTTDNLRISDRA
                     HVILPYHIKLDQLQEESKGENKIGTTNKGIGPAYMDKAARVGIRIADLLDKEIFAERL
                     RTNLAEKNRLFEKMYESTPIEFDEIFEEYYAYGQEIKKYVTDTSVILNDALDQGKRVL
                     FEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKIDKVVGVCKAYTSRVGDGP
                     FPTELHDEIGDRIREIGKEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVL
                     SGLETLKICVAYDLDGERIDHYPASLEQLKRCKPIYEELPGWSEDITGVRSLDELPEA
                     ARNYVRRISELVGVRISTFSVGPGREQTNILESVWSAK"
     gene            1745..3976
                     /gene="gshAB"
                     /locus_tag="U1021_002085"
     CDS             1745..3976
                     /gene="gshAB"
                     /locus_tag="U1021_002085"
                     /EC_number="6.3.2.2"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate--cysteine ligase
                     GshA/glutathione synthetase GshB"
                     /protein_id="HEM4712575.1"
                     /translation="MLQKLSPNSPILQATFGIERESLRINSNHRVAQTPHPHKLGSRN
                     FHPYIQTDYSEPQLELITPIAHSTKEARRFLGAITDVAVRSMDKQEYLWPLSMPPVIS
                     EEEIQIAQLDSDYEYQYRVGLGERYGKLVQSMSGIHYNFELGKDLTQQLFELSEETDF
                     IAFKNTLYLKLAQNFLNYRWLLTYLYGASSLAEKGFLTTEVGCVRSIRNSKYGYVNSD
                     DVHISFSSLEQYVADIEQAVQSGQLSAEKEFYSSVRLRGAKTSRDYLSKGISYLEFRS
                     FDLNPYDPLAISQETLDTVHLFILSLLWLDQLTDVDNTLAKADKLNNLIALSHPHTPL
                     PNDADATPILTAMKAIVLHFGLDDYYGQLIAHVEAALQNPRLTLSGKIAEQVEDGSLE
                     KFGQQQGQVFHDYAWTAPYALKGYENMELSTQMILFDAIQLGLNVEILDEEDQFLKLW
                     HGDHVEYIKNGNMTSKDNYVIPLAMANKVVTKKILDQAGFPVPAGAEFANKTDALRYY
                     GQVASSAIVVKPKSTNFGLGISIFQEPASLADYEKALDIAFSEDSHVLVEEFVAGTEY
                     RFFILDGKCEAVLLRVAANVVGDGSSTIRELVDQKNQDPLRGRDHRSPLEIINLGDIE
                     LLMLEQQGYTPDTVLPEGIQAFLRGNSNISTGGDSIDMTDQMDESYKQLAAAMATAMG
                     AWACGVDLIIPDRTKPASKDEPNCTCIELNFNPAMYLHTYTYAGPGQSITPKILKKLF
                     PEL"
BASE COUNT         1142 a         1029 c          843 g         1092 t
ORIGIN      
        1 ataagcatga ttatatcaaa ttctggacaa gaaagcaaag ttcgaccaaa cagaaaaaga
       61 ccgaactctc gttcagcctt aattcatctt attttgcact ccacacactc tcgagaatgt
      121 tggtctgttc acgaccagga cctactgaga aggttgagat acgaacgccg accaattcgc
      181 tgatgcgacg aacatagttg cgagctgcct ctggcaattc atccaaacta cgcacacctg
      241 tgatgtcttc tgaccaacct ggcaattctt cgtaaattgg tttgcaacgt ttgagttgtt
      301 ccaagcttgc tgggtagtgg tcaatacgct caccatccaa gtcgtaagcc acgcagattt
      361 tcaaggtctc aagacctgac aagacgtcaa tcgagttgag ggacaagttg gtaatacctg
      421 acacacggcg gctatggcgc atcaccactg agtcaaacca accgacacgg cgtgggcgac
      481 ctgttgtcgt accgtattct ttaccgattt cacggatacg gtcgccgatt tcatcgtgca
      541 attcagtcgg gaatggtccg tcaccaacac ggctagtgta ggccttacat acaccaacaa
      601 ccttgtcaat cttgcttgga ccgacaccgc taccgatagt cacaccacca gcaactgggt
      661 ttgaagaagt aacaaatgga taggtacctt ggtcaatatc caacataact ccttgcgcac
      721 cttcaaacaa gacacgcttg ccttggtcga gggcatcgtt caagataaca gatgtgtctg
      781 ttacatactt tttgatttct tgaccgtagg catagtattc ttcaaagatt tcgtcaaact
      841 caatcggagt tgactcatac atcttctcaa acaaacggtt tttctcagcc aagtttgttc
      901 tcaaacgctc tgcaaaaatc tccttgtcca agaggtctgc gatacggata ccaacacgtg
      961 cagccttgtc catgtaagca ggaccgatac ccttgttggt tgtaccaatc ttgttctcac
     1021 ctttagactc ttcttgcaac tggtccaatt tgatatggta aggcaagatg acatgtgcgc
     1081 ggtctgaaat ccgcaaatta tctgttgtca cacctgaatc atggaggtaa ttgatttcct
     1141 tcaccaaaga ttttggattg acaactacgc catttcctat aaccgaaatc ttttctggga
     1201 agaaaattcc agacggaatc aagtgcaact tatacttggt accgtcgata acgatagtat
     1261 gtcctgcatt atctccacct tgatagcgcg cgattacttc agcattagca gacaagaagt
     1321 ctgtaatttt acccttacct tcgtcgcccc actgggttcc tacaacaact actgatgtca
     1381 tattcactct ttctctgaac tggctgacca gcccagcctt tcttctactt ctggcaggaa
     1441 tctcacctgc aagtttcgtt ttacacacta ttctatcaaa aaacgaacat tttttcaaga
     1501 aattccaata atttcatata tagcgaatgt ttttattttt taaaaagtat attttaaaaa
     1561 aatccgatta aacatacgag atagacatgt gtaaatatgc ttttaacaga gaaatccgaa
     1621 gtctttgttt gctttcagtg attttcagta cattttttac cagaaacgta gcagaaattt
     1681 gtatttgccc tccaatctag ataaaattgg aataagactt tgacagaaat ataaaggact
     1741 tagtatgtta caaaaattat caccaaacag ccccattctt caggctactt ttggaattga
     1801 gcgcgaatca cttcgcatca attcaaacca cagagttgca caaactcccc atcctcataa
     1861 actgggttct cgtaacttcc acccctatat ccagacagac tacagcgagc cacagttaga
     1921 gttgattaca ccgatcgctc attcgaccaa ggaagcccgt cgtttcctcg gagctatcac
     1981 ggatgtagcg gtgcggtcta tggataagca agaatacctc tggcccctat ccatgccacc
     2041 tgtgatttca gaagaggaaa tccaaattgc tcaactagat agcgactatg agtaccaata
     2101 tcgtgtcggt ttgggggaac gctatggcaa gctcgtccag tctatgtctg gcatccatta
     2161 taattttgaa ttaggaaaag acttaaccca acaacttttt gaattaagcg aggaaacaga
     2221 ttttatcgca ttcaaaaata ctctctacct caaattagca caaaacttcc tcaactatcg
     2281 ttggctctta acttacctat atggagcaag tagcctagcc gaaaaaggat tcctaaccac
     2341 ggaagtcggt tgcgtccgtt ccattcgtaa ttccaagtac ggctatgtca actccgatga
     2401 tgttcatatt tccttttctt ctctcgaaca gtacgtggcc gacatcgaac aagctgtcca
     2461 atctggtcaa ctatccgctg agaaggaatt ttactcttcc gtccgactac gtggagcaaa
     2521 gactagccgc gactacctca gcaaggggat ttcttattta gaattccggt ccttcgacct
     2581 taacccctat gacccgcttg ctattagtca ggaaaccctt gatacagtcc acctctttat
     2641 cttatctctt ctttggctag accaactgac agatgttgat aacaccttag caaaagcaga
     2701 taaacttaac aatctcatcg ccctcagtca cccccacaca cctctaccta acgatgccga
     2761 tgccacgcca atcttgacgg ccatgaaagc catagttcta cactttggac tggatgacta
     2821 ctatggccag ctcattgcac atgtggaggc agcacttcaa aaccctcgtt tgaccctttc
     2881 tggaaaaata gcagagcagg ttgaagatgg gtctctggaa aagtttggtc agcagcaggg
     2941 acaagtcttt catgactatg cttggacagc cccttacgcc ctcaagggct atgaaaacat
     3001 ggaactctcc acccagatga ttctctttga cgccattcag ctgggcttga acgtggagat
     3061 tttggatgag gaagaccagt ttctcaaact atggcatggt gaccatgtcg agtacatcaa
     3121 aaatggcaac atgacttcca aggacaacta cgtcattcct ctagccatgg ccaacaaggt
     3181 cgtgaccaag aagattttgg accaggctgg ttttccagtg cctgcgggag ctgaatttgc
     3241 aaacaagaca gatgccctgc ggtactacgg gcaggtagcc agctctgcca ttgttgtcaa
     3301 accaaaatct accaactttg gactaggaat ctctatcttc caggagccag ccagccttgc
     3361 ggactatgaa aaagccctgg acatcgcctt ttcagaagat agccatgtgc ttgtggagga
     3421 attcgtggcg ggaaccgagt accgtttctt catccttgat ggcaagtgcg aggctgtcct
     3481 gctccgcgtc gcggccaatg tcgtggggga cggtagctca accatccgtg aattggtgga
     3541 ccaaaaaaac caagatccac tgcgagggcg tgaccaccgt tcaccgctgg aaatcattaa
     3601 cttgggcgac atcgagctac tcatgttaga acagcagggc tacacacccg atacagtttt
     3661 gccagagggc attcaagcct ttctgcgtgg caattccaat atctcaacgg gtggtgactc
     3721 cattgatatg accgatcaga tggacgagtc ctacaagcaa ctggctgccg ctatggcgac
     3781 tgctatggga gcttgggcct gtggtgtgga cttgattatc cccgaccgca ccaagccagc
     3841 cagcaaagac gagcccaact gtacctgcat cgaactcaac ttcaaccctg ccatgtacct
     3901 gcacacctat acttacgcag gacctggaca gagcattacg ccgaaaattt tgaaaaaatt
     3961 atttccagag ctttagtttt ccattttcct tactttgtta gtacttactt caaaggttcg
     4021 tggaactttt gaaggctgga gataaggcaa agcacattcg cctcaatagc tgcaggttgc
     4081 tgggagtggg aaagaactcg accaag
//
LOCUS       DASFQD010000156         4080 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.159, whole genome shotgun sequence.
ACCESSION   DASFQD010000156 DASFQD010000000
VERSION     DASFQD010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4080)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4080)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4080
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.159"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            64..903
                     /locus_tag="U1021_002086"
     CDS             64..903
                     /locus_tag="U1021_002086"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015632084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEM4712576.1"
                     /translation="MTKADIIFKENIRKIMEEGVFSENARPRYKDGNVANSKYITGSF
                     AEYDLSKGEFPITTLRPIPIKSAIKEILWIYQDQTNDLSVLQEKYGVQYWNDWEVEGT
                     GTIGERYGAIVKKHDIISKILKQLEENPWNRRNVISLWDYEAFDQSAGLLPCAFQTMF
                     DVRQVDGEIYLDATLTQRSNDMLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNL
                     HIYDNQFEQAEELFRRTPYEVEPRLVLNVPDGTNFFDIRAEDFELVDYSPVKPQLKFD
                     LAI"
     gene            1079..1591
                     /locus_tag="U1021_002087"
     CDS             1079..1591
                     /locus_tag="U1021_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEM4712577.1"
                     /translation="MTKKIVAIWAQDENGLIGKGDRLPWSLPADLAHFKETTTGHTMV
                     MGRITFDGMGKRALPNRHTIVLTTDKTYQLESEHVTILHSVEDVLDWYNKQEQTLFVL
                     GGGQIFTAFAPYIETLIVTDIHGQFNGDVYFPKAFPMEKFQLQSANLRPKDEKNPYDF
                     TIKTYERRDG"
     gene            1594..1767
                     /locus_tag="U1021_002088"
     CDS             1594..1767
                     /locus_tag="U1021_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712578.1"
                     /translation="MERSIFGLFTAFLCGICVLCAIQAFRKKRFGLAILFLLNAFTNL
                     VNSIHAIYGFLFR"
     gene            1789..3015
                     /gene="clpX"
                     /locus_tag="U1021_002089"
     CDS             1789..3015
                     /gene="clpX"
                     /locus_tag="U1021_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEM4712579.1"
                     /translation="MAVKHTHEFIYCSFCGKNQEEVKKIIAGNNVFICNECVELAQEI
                     IREELAEEVLTDLADTPKPQELLNILNNYVIGQDRAKRALAVTVYNHYKRINFQDSRD
                     ENDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENIL
                     LKLLQAADFNIDRAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVA
                     SVPPQGGRKHPNQEMIHVDTKNILFIVGGAFDGIEEIVKQRLGEKIIGFGHNNRAIDE
                     KESYMQHIIADDIQKFGIIPELIGRLPVFAALDQLTTEDLVRILTEPKNALVKQYQTL
                     LSYDDVELDFDEDALLAIAEKAIERKTGARGLRSIIEETILDVMFEVPGQDNVKRVRV
                     TKAAVDGKEKPLLETA"
     gene            3071..3658
                     /locus_tag="U1021_002090"
     CDS             3071..3658
                     /locus_tag="U1021_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002915299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEM4712580.1"
                     /translation="MEINTHNAEILLSAVSKAQYPGDDIPEIALAGRSNVGKSSFINT
                     LLGRKNLARTSGKPGKTQQLNFYNIDDKIRFVDVPGYGYAKVSKTERAKWGKMIEEYL
                     TTRENLRVVVSLVDMRHEPSADDVQMYDFLKYYEIPVIIVATKADKIPRGKWNKHESM
                     IKKRLDFDKNDQFVIFSSETRHGYDQAWDAILSNI"
     gene            3681..4080
                     /gene="ndk"
                     /locus_tag="U1021_002091"
                     /pseudo
     CDS             3681..4080
                     /gene="ndk"
                     /locus_tag="U1021_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934976.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
BASE COUNT         1290 a          736 c          905 g         1149 t
ORIGIN      
        1 ttttcaaatg agaactccgg tacaaaactg gagttttttg ctagaatttg ctatactaag
       61 accatgacta aagcagatat tatttttaaa gagaacattc gaaagattat ggaagagggc
      121 gttttttcag aaaatgctcg cccacgttac aaggatggaa atgttgctaa ttctaagtat
      181 attactgggt cctttgctga gtatgacttg tctaagggcg agtttcctat taccacacta
      241 agaccaattc cgattaaatc cgccataaaa gaaattctct ggatttacca agatcagact
      301 aatgacttgt ctgttttaca agaaaagtat ggcgtccagt attggaatga ttgggaagtt
      361 gagggaacag gcacaatcgg tgaacgttac ggtgccatcg tgaaaaaaca tgacatcatt
      421 tcaaaaatcc tcaagcaatt ggaagaaaat ccatggaacc gtcgcaatgt gatttctttg
      481 tgggactatg aggccttcga ccagtcagct ggtctcttgc catgtgcctt tcagaccatg
      541 tttgacgttc gacaagtgga tggggagatt tatctggatg ctactctgac ccagcggtca
      601 aatgatatgt tggtagccca tcatatcaac gctatgcagt atgttgccct tcagatgatg
      661 attgctaaac attttggctg gaaggtaggg aagtttttct atttcatcaa taacctccac
      721 atctatgaca atcagtttga acaggctgaa gaattattcc gtcgcacacc atatgaagtt
      781 gagccacgtt tggtcttaaa tgttcctgac ggtaccaatt tctttgatat tcgggcagaa
      841 gattttgaat tggtggatta cagtccagtt aaaccgcagt taaaattcga tttagcgatt
      901 taagatgagg ggggctttcc agcaccagcg agattcacat tctacgaatc tcggaatctt
      961 ccctatctct gaggagtagg tgatagtttc aacatgataa aaatttgcac tagacctact
     1021 tggtaagtgc atttttcatg tttttttgat agaatgatag gacggaaagt gagagaaaat
     1081 gactaaaaag attgttgcca tttgggctca agatgaaaat ggattgattg gaaaaggtga
     1141 tagacttcct tggtcattgc cagctgactt agctcatttt aaagaaacga caacaggtca
     1201 cacgatggtg atgggacgta taaccttcga cggcatgggt aaacgtgctc ttcccaatcg
     1261 tcacacaatt gttttgacaa cggataaaac ctatcaacta gagagtgaac atgttaccat
     1321 tttacacagt gtggaagatg tcctagattg gtataacaaa caggagcaga cactatttgt
     1381 gcttggtggg ggacaaattt ttactgcttt tgcaccttac attgaaacat taatagtgac
     1441 agatattcac ggtcaattta atggcgatgt gtattttccg aaagcatttc ctatggagaa
     1501 atttcagcta caaagcgcca atttacgtcc aaaagacgag aaaaacccgt atgattttac
     1561 aataaaaacc tatgaaagaa gagatggtta gacatggaga gaagtatatt cggtttattt
     1621 acagcatttc tctgtgggat ttgtgttctt tgtgcgattc aagcctttcg gaagaaacgt
     1681 tttggtttag caattttatt tttactgaat gcttttacca atctggtcaa tagcattcat
     1741 gccatttacg gctttttatt tagataagag atatgaaaga ggaattacat ggctgttaag
     1801 catacacatg agtttattta ttgctcattt tgtggaaaaa atcaagaaga agtaaaaaaa
     1861 attatcgcag ggaacaatgt cttcatttgt aatgagtgcg tggaactagc acaggaaatc
     1921 attcgtgagg aactggcaga agaagttttg acagacttgg ccgacacgcc aaagccacaa
     1981 gaattgctca atattttaaa caattatgtc attgggcaag accgtgcaaa gcgtgccttg
     2041 gcagtaactg tttacaacca ctacaagcgc atcaatttcc aagatagccg tgatgagaac
     2101 gatgttgatt tgcaaaaatc aaatatcctc atgattggcc cgactggttc tggtaagact
     2161 ttcttggctc aaaccttggc caaaagtttg aatgtaccat tcgccattgc agatgcgaca
     2221 gcactaactg aggctggtta cgttggtgaa gacgtggaaa atatccttct caaacttttg
     2281 caggctgcag actttaacat cgaccgtgca gaaagaggaa ttatctatgt ggatgaaatt
     2341 gataagattg ccaaaaaagg tgaaaatgtg tccattaccc gcgatgtatc tggtgagggt
     2401 gtccagcaag ctctcctaaa aattatcgag ggaactgtgg ccagcgtacc accacaaggc
     2461 ggacgcaaac atccaaacca agaaatgatt cacgtggaca ccaaaaatat cctgtttatc
     2521 gttggcggtg catttgatgg tatcgaagaa atcgtcaaac agcgtctcgg tgaaaaaatc
     2581 atcggttttg gtcataataa tcgtgctatt gatgaaaaag aatcatacat gcaacatatc
     2641 attgcagacg atattcaaaa attcggtatc attccagagt tgattggtcg cttgcctgta
     2701 tttgcagctt tggaccaatt gacaacagag gatttggtac gcattttgac ggaaccgaag
     2761 aatgctcttg taaaacaata ccagacactc ttgtcttatg atgacgtgga gcttgacttt
     2821 gatgaggacg ccttgttagc aattgcagaa aaagcaattg aacgtaagac tggtgctcgt
     2881 ggacttcgct ccatcattga agaaacgata ttggatgtca tgtttgaggt gccaggccaa
     2941 gataacgtta aacgcgttcg tgtaacaaaa gcagcagtag acggtaaaga aaagccttta
     3001 ctagaaactg cataaaaaaa taaagggtgg aaactgattg ttttctaccc ttatttatga
     3061 aaggtataaa atggaaatca acacacataa tgctgagatt ttgctcagtg ctgtttcaaa
     3121 agcccagtat ccgggcgatg acattccaga aattgccctt gccgggcgat ctaacgttgg
     3181 aaagtcctca tttatcaata ctcttctagg aagaaaaaat cttgcacgta cgtcaggaaa
     3241 accaggaaag actcaacaac tcaattttta taatatagat gataaaattc gatttgtaga
     3301 tgttccaggt tatggctatg ctaaagtgtc caaaacagag cgcgctaagt ggggcaaaat
     3361 gattgaagag tatttgacaa cacgagaaaa tctacgtgtt gtggtgagtt tagtagacat
     3421 gcgtcatgag ccatcagcag atgatgttca aatgtatgat ttcttgaaat attatgaaat
     3481 tcctgttatt attgtggcaa cgaaggctga taaaatccca cgaggaaagt ggaataagca
     3541 cgaatcgatg attaaaaaga gattggattt tgataaaaat gatcaattcg ttatcttttc
     3601 ttccgaaact cgtcacggat acgatcaggc atgggatgct atcttaagta acatctaata
     3661 aacagttcag gagaaaaatc atggaacgta ctttcttcat catcaaacca gatgctctta
     3721 agcgtggact tgcaggacaa attctttcac gtatcgaacg caggggattt caaatccgag
     3781 atttaaaaat ggttacagcg acagaagagc taatcagtca acattatgaa taaacctttc
     3841 ttcccgcaat tagtacaata tatgacgagc gggccgatga tagctggcat tatagaaggg
     3901 ccagaagtta tcaaatcttg gcgagatatg atgggagcta ccaatccagt aaacgcccta
     3961 cctgggacta ttcgtggaga ttttgcgaca gcccccgttg agggaattgt ggcaaatgtc
     4021 gttcatggct cagatagtgc agaagcagct gaacgagaga tcggtctttg gctgggaaaa
//
LOCUS       DASFQD010000157         3864 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.160, whole genome shotgun sequence.
ACCESSION   DASFQD010000157 DASFQD010000000
VERSION     DASFQD010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3864
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.160"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            139..357
                     /locus_tag="U1021_002092"
     CDS             139..357
                     /locus_tag="U1021_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgQ family protein"
                     /protein_id="HEM4712581.1"
                     /translation="MKRLYDVQQLLKRFGIIIYMGNRLYDIEMMQIELNRVYQAGLLD
                     RMAYMEAELVLRREHRLELEYQKMKESQ"
     gene            357..743
                     /locus_tag="U1021_002093"
     CDS             357..743
                     /locus_tag="U1021_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEM4712582.1"
                     /translation="METLWVFLVFVIILGSWMGFNYWRLRRAATVIDNAEFAEKIHGG
                     QLIDLRDPSEFNRKHILGARNIPYQQLRQSTAALRKDRPVLIYENDRGQLVTPAALHL
                     KKQGFNEIYILSYGLNGWNGKVKTTK"
     gene            800..1516
                     /locus_tag="U1021_002094"
     CDS             800..1516
                     /locus_tag="U1021_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HEM4712583.1"
                     /translation="MEKKFEKLSLAEIGIISFMGLILLISLGASWYKNAQSETSDTKT
                     VQQVPNQKKTVDTLFQDAENAVIVLEGTHTEEKLAEAQSAVNKVTDATKKAALQKRID
                     QVKELVGQQIDAQTQAKLKAELVRAEAAQKVADEKKVSETGTSQSTDLAEASETSQES
                     YVVPNQNIYGNQSVSSTSQYTSSVASTSTSVPPTSEGAPMVETPTVSETPAETTDSTT
                     SLVESVETVPTADESSPDNP"
     gene            1826..2365
                     /gene="rsmD"
                     /locus_tag="U1021_002095"
     CDS             1826..2365
                     /gene="rsmD"
                     /locus_tag="U1021_002095"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEM4712584.1"
                     /translation="MRIVSGSYGGRPLRTLDGKTTRPTSDKVRGAMFNMIGPYFEGGR
                     VLDLYAGSGGLSIEAISRGMESAVLVERDRRAQAIIRENIAMTKEADKFQLLAMEARQ
                     ALNSVEGPFDLVFLDPPYAEQEIEDVITELCRRDLLADDVMVVCETDKAVSLPEEIAE
                     LGIWKEKLYGISKVTVYVR"
     gene            2355..2843
                     /gene="coaD"
                     /locus_tag="U1021_002096"
     CDS             2355..2843
                     /gene="coaD"
                     /locus_tag="U1021_002096"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEM4712585.1"
                     /translation="MSDKIGLFTGSFDPITNGHLDLIERASGLFDKLYVGVFTNPKKA
                     GLLTVLERKVILEKLFVGMENIEVVLSENELVVDVAKRYGVTHLVRGLRNATDLEYES
                     SFDFYNRQLAPDLETIYLIAKPELKFVSSSQVRELLYFKQDIGPYVPEIVSEEIRKNE
                     EK"
     gene            2830..>3864
                     /locus_tag="U1021_002097"
     CDS             2830..>3864
                     /locus_tag="U1021_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEM4712586.1"
                     /translation="MKKNRKLTLIASIVLGTLLIWFAVFVRLPYYLESPGGAADIRQV
                     LTVNNQIDQEDGSYNFTYVSVQQATALQLFAAQFDPYTTVRSSEEMTGGADNEEYFRI
                     AQFYMETSQNMAKYQGLTLAGKEVNLDFFGVYVLALADDSTFKKVLNIADTVVSINGK
                     TFESSPDLIKYVSGLELGSDVTVGYISAGQEKSADGKIIKLSNGKNGIGITLVDHTEV
                     QSSIPIDFQTGDIGGPSAGLMFTLAIYTQLAEPDLRDGRIIAGTGTIEQDGKVGDIGG
                     ADKKVISAAKSGASIFFVPNNPVDVEVLKKNPKAKTNYEEAKEAAEKAGLDIEVVPVK
                     TVQEAIDYLKK"
BASE COUNT         1197 a          627 c          937 g         1103 t
ORIGIN      
        1 agaatagttt ctttaattgt ttaaatgctt aacttaatga cattggggga gaacccaatc
       61 tttttttgat gaatgcaggg aaacagcact tgagttttta tattgaaaat cttcggatat
      121 tctgctaaaa tttactatat gaaacgacta tatgatgtgc aacagttgct aaaacgcttt
      181 ggtattatca tctatatggg caatcgtctc tatgacatcg agatgatgca gatagagctc
      241 aatcgcgttt atcaggctgg tcttctggat aggatggcct acatggaggc cgaattggtt
      301 ttgcgacggg aacatcgttt ggaattagag tatcagaaga tgaaggagag tcagtagtgg
      361 aaactttgtg ggtatttctc gtatttgtta ttattttagg gtcatggatg ggctttaatt
      421 actggagatt gcgtcgtgca gcgactgtga ttgataatgc agaatttgca gaaaagatac
      481 acggaggtca gttgattgac ctgcgagacc cgagtgagtt taatcgtaag catatcttag
      541 gtgcgagaaa tattccttac cagcaattgc gccagtctac agctgctttg cgtaaggaca
      601 gacctgtctt aatctatgag aatgatcgtg gtcagttggt aacgcctgca gctcttcatc
      661 tgaagaaaca gggctttaac gaaatctata ttttaagcta tggtctaaac ggatggaatg
      721 gtaaggtaaa aacgactaag tagcattgtc agtaggctag agtattttct tatgcaataa
      781 gacggataag ggcaaaaata tggaaaagaa atttgaaaag ttgtcattgg cagaaattgg
      841 cattatttct tttatgggac ttattttatt gattagctta ggcgctagtt ggtataaaaa
      901 tgctcaaagc gaaacaagtg atacaaagac agtacagcaa gtgcccaatc agaaaaaaac
      961 ggttgataca ttatttcagg atgctgagaa tgctgtcatt gtattagaag gaacacatac
     1021 tgaagagaaa cttgcagagg cacaatctgc agtaaacaag gttacggatg cgactaaaaa
     1081 agcagcatta cagaaacgga ttgaccaagt aaaagagcta gtgggacagc agatagatgc
     1141 tcaaacacag gctaagctaa aagcggagtt ggtcagggcg gaagcagccc aaaaagtagc
     1201 tgatgagaaa aaagtatctg aaacagggac tagtcagtca acggaccttg ctgaagctag
     1261 tgagacctca caagaatcct atgtagtgcc taatcaaaat atatatggaa atcaaagtgt
     1321 gagttcaaca agccagtata caagcagcgt ggcgtcaact agtacttcag tccctccgac
     1381 tagtgaagga gcacctatgg tagaaactcc aacagtttct gaaacaccgg cggaaacgac
     1441 ggattcaaca actagcctgg ttgagtcagt agaaacagtt ccaacagctg acgagagttc
     1501 accagataat ccgtaggctt tttgactact ggttctttat ggcgtattaa catactagaa
     1561 aaatagctat ttgtatttca atatcaattt tttcttgtaa cgatctagtt taaatacata
     1621 cgataagagt gaggaatttc gcgtaaaaca gaatttcctt gctttttatt tttatcattt
     1681 tattgaataa tgtgagaatg atttcctgct atagcggttg agagtgtatt tgataggagg
     1741 atgaaaaagt tggtgcaaaa aggaaagcag aacaaagtgc acttggtttc agcaacgagc
     1801 ttcatttttt gctataatat accttatgag aattgtatcg ggaagctatg gtggaagacc
     1861 actgagaacg ttagatggaa aaacaaccag accgacatcg gataaggtcc gtggagccat
     1921 gttcaatatg attggtccct attttgaggg tggtagagtt cttgacttgt acgccggcag
     1981 tggtggttta tctatcgagg ctatatctcg tggcatggag tcagcagttc tggttgagcg
     2041 agatcgacga gcacaagcca ttatccgtga aaatattgca atgactaagg aagcagataa
     2101 atttcagctt ctagcaatgg aagctagaca ggctttgaac agtgtggaag ggcctttcga
     2161 cctggtattc ttggaccctc cttatgcaga gcaggaaatt gaagatgtga taacagaact
     2221 ttgtcgccgt gacttactag cagatgatgt tatggtagtc tgcgaaacgg ataaggcggt
     2281 ctctcttccg gaggaaatag cagagctggg gatatggaaa gagaaactct atggaattag
     2341 taaggtaaca gtatatgtca gataagattg gattgtttac gggctcattt gaccccatta
     2401 ccaatggaca cttggactta attgaacgag cgagtggact atttgataaa ttatatgtgg
     2461 gagtttttac caatcctaaa aaggcaggac tcttgacggt cttggagaga aaagtcattt
     2521 tggagaagct ttttgtagga atggagaata tcgaggtcgt tctgtctgaa aatgaattgg
     2581 tagtcgatgt agctaagcgc tatggagtaa cacatttggt ccgaggattg cgtaatgcga
     2641 ccgatttgga atacgagtca agttttgatt tttacaatcg tcagttggcg ccagatttgg
     2701 aaactattta tttaatcgcc aagccagagc ttaagttcgt atcatccagt caggttcgag
     2761 aattgctgta tttcaaacag gatataggtc cttatgttcc agaaattgtt agtgaggaga
     2821 ttagaaagaa tgaagaaaaa taggaagtta accttaattg catctattgt tttaggaact
     2881 cttttgattt ggtttgccgt ttttgttcgt ctgccttatt atttggaaag tccaggtgga
     2941 gctgccgata ttcgtcaggt actaacggtg aacaatcaaa tagaccaaga ggatggctct
     3001 tacaacttca cctatgtatc agtccaacaa gctacagctt tacaactatt cgctgctcag
     3061 tttgatccct atacgacagt tcgttcctct gaagagatga caggaggggc cgacaatgaa
     3121 gagtattttc gtatagcaca gttttacatg gagacatcgc aaaatatggc gaagtaccaa
     3181 ggtttgacct tagcaggaaa agaagtcaat cttgatttct ttggtgtcta tgtacttgcc
     3241 ctggcggatg attcgacctt taaaaaagtt cttaatattg ccgacactgt tgtgagtatc
     3301 aatggaaaaa catttgagtc ttctcctgat ttgataaaat atgtgagtgg cttggaactt
     3361 ggaagtgatg taacagttgg ttatattagc gctggtcagg aaaaatctgc ggatggaaaa
     3421 attatcaaat tgtctaatgg caaaaatggg ataggtatca ctctcgtaga tcatacagag
     3481 gttcaaagtt cgattccgat tgatttccaa acaggagata ttggtggtcc aagtgctggt
     3541 ctgatgttta cacttgccat ctatactcaa ctcgcagagc ctgacttacg tgatggtcgg
     3601 attattgctg gtacggggac tatcgagcag gatggaaaag taggtgacat tggtggggct
     3661 gataagaagg tcatttcggc agctaagtct ggtgcaagta tcttttttgt accaaacaat
     3721 ccagttgatg tagaagtttt gaagaaaaac ccaaaggcta aaacgaacta tgaagaagct
     3781 aaggaagcag ccgagaaagc aggtctagat attgaggtag ttcctgtgaa aactgttcaa
     3841 gaggctattg attatttgaa gaaa
//
LOCUS       DASFQD010000158         3763 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.161, whole genome shotgun sequence.
ACCESSION   DASFQD010000158 DASFQD010000000
VERSION     DASFQD010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3763
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.161"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..284)
                     /locus_tag="U1021_002098"
     CDS             complement(<1..284)
                     /locus_tag="U1021_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014947343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEM4712587.1"
                     /translation="MNFFDCFSGIGGFRMGMESQGHTCIGFCEIDKFARRSYQAIFET
                     EGELEYHDITQITDDQLRKLRGQVDVLCGGFPCQAFSLAGRRLGFEDTRGT"
     gene            complement(438..1223)
                     /locus_tag="U1021_002099"
     CDS             complement(438..1223)
                     /locus_tag="U1021_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016397065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiator protein A"
                     /protein_id="HEM4712588.1"
                     /translation="MKRISANHYQTSERYYKLPKLLFESDRYKDMKLEVKIAYAVLKD
                     RLELSLSRGWIDEQGFIYLIYSNSKLMELLGCSKSKLLAIKKSLRDFGLIEEVQQSSS
                     EKGRLANKIYLGELEHEPTPVLNSDGGGVKKTRGQSQNQTGPVLISATSETEDNETEH
                     SETKESDCLSEDEEEKGLTRKVDKPTTYDKDYIYQLVYDQLIREKFSKTSAEFVMRHF
                     DDRYQYALDNMRFARTAEVIAEYVFNGILAEWNKERRQEQERR"
     gene            complement(1210..1389)
                     /locus_tag="U1021_002100"
     CDS             complement(1210..1389)
                     /locus_tag="U1021_002100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712589.1"
                     /translation="MDFAESTRLGVVGYLMLTMGVTLPKATEILKELETSGLVNVKTG
                     GQLEIKVVEDNHETN"
     gene            complement(1528..1674)
                     /locus_tag="U1021_002101"
     CDS             complement(1528..1674)
                     /locus_tag="U1021_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018167237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutT"
                     /protein_id="HEM4712590.1"
                     /translation="MSRREQVVLTNMCMITDGRRVLVQDRKSEKWPGVTFPGGDCVII
                     MTGA"
     gene            complement(1678..2046)
                     /locus_tag="U1021_002102"
     CDS             complement(1678..2046)
                     /locus_tag="U1021_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712591.1"
                     /translation="MDRVYAVKCLVKNEFEPTYENYSSYEEVTYLLPANVLVWDDEQV
                     DKNKLADYLRGLVEDGYVNADGIWKQSRLFHIAGVQEMDDRVEFDGPAVEVYRWFYNF
                     ERPVTEEEFLNLYYFDDLGR"
     gene            complement(2039..2608)
                     /gene="rnmV"
                     /locus_tag="U1021_002103"
     CDS             complement(2039..2608)
                     /gene="rnmV"
                     /locus_tag="U1021_002103"
                     /EC_number="3.1.26.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009910916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease M5"
                     /protein_id="HEM4712592.1"
                     /translation="MTQKIKIQEVLVVEGKDDTANLKRFYEVDTYETRGSAISDDDLE
                     RIEKLHDLRGVIVFTDPDYNGERIRKIIMQAIPTVKHAFLQRDEATPKSKTTGRSLGI
                     EHASFEDLEKALAGVRGYYDDENNFDISKSDLMRLGLLMGGESRKRREYLGEKLRIGY
                     CNGKQLLKRLELFGISLVEVEEAMESYHG"
     gene            complement(2592..3374)
                     /locus_tag="U1021_002104"
     CDS             complement(2592..3374)
                     /locus_tag="U1021_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEM4712593.1"
                     /translation="MIQIFDTHTHLNVEQFDGRVQEELDFAKEMGVTLHNVVGFDRAT
                     IDKAMELADQHPEIYLTLGWHPTEAGTYDEEVENYLLKALQHPKVIALGEIGLDYYWM
                     TADKEIQARVFKRQMELAKQLDLPFVVHTRDALEDTYQIIKEVGVGPRGGIMHSFSGT
                     LEEAQAFMDLGMHISFSGVVTFKKAVELQEAAQALPLEKILVETDAPYLAPVPKRGRE
                     NRTGYTRYVVDMLAQLRNQSVEEVARATYENARSLFRIDSEN"
     gene            complement(3482..3619)
                     /gene="rpmH"
                     /locus_tag="U1021_002105"
     CDS             complement(3482..3619)
                     /gene="rpmH"
                     /locus_tag="U1021_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEM4712594.1"
                     /translation="MKRTFQPSKIRRARKHGFRSRMATKNGRRVLAARRRKGRKVLTV
                     A"
BASE COUNT          961 a          979 c          728 g         1095 t
ORIGIN      
        1 gtgcctctag tgtcctcaaa tcccagtcgt ctgcctgcga gagaaaaggc ttggcaagga
       61 aagcccccac agaggacatc aacttgtcct cggagttttc tgagttggtc atcggtgatt
      121 tgggtaatgt catggtattc taattctcct tctgtctcaa aaatggcctg ataagaccgt
      181 ctagcgaatt tgtcaatttc gcaaaaacca atgcaggtat ggccttggct ttccattccc
      241 atacgaaagc caccaatccc tgaaaagcaa tcaaaaaagt tcatcaattt ctcctttcgg
      301 gtatcaaaaa agaccttaca tctcgtaaag ccttggttag atatggtcct ccatctctgg
      361 agcattgata atctcaacca ccaaactgat gattgacaca ataaaaatgc ctagtgcaag
      421 tttccaccac atggttctca cctcctctcc tgttcttgtc ggcgttcctt attccactct
      481 gccagaatcc cattaaagac atactcagct ataacctctg ccgttctggc aaacctcatg
      541 ttgtccaaag catactggta acggtcatca aagtgcctca tgacaaactc tgcacttgtc
      601 ttagaaaact tctcacgaat cagctggtca tagaccaatt ggtaaatata atccttgtca
      661 taggtggttg gcttatccac tttgcgagtg agcccttttt cctcctcatc ctctgaaaga
      721 caatcgctct ctttagtctc actatgttca gtctcattat cttcagtctc actagtggct
      781 gaaatcaaga cggggcccgt ctgattttga gactggcccc gtgttttttt aacaccaccc
      841 ccgtctgaat ttaagacggg ggtcggttca tgttctaatt caccaaggta aatcttgttt
      901 gcgagccgac ctttttcact tgatgactgt tggacttctt caataagtcc aaagtctcgc
      961 agtgatttct taatagccaa gagttttgac tttgaacagc ctaaaagttc catcaatttt
     1021 gagttagagt aaatcaagta gataaagccc tgctcatcta tccagcccct actcaaagac
     1081 aactccagtc gatctttcaa aacagcataa gcaatcttga cctccagctt catatccttg
     1141 tatcggtcac tctcaaacaa gagctttgga agtttgtagt atctttccga tgtctgataa
     1201 tgattggcac taattcgttt catgattgtc ctccactact ttgatttcta gttgacctcc
     1261 tgttttgaca ttaaccaggc cacttgtttc taattctttc agtatttctg tcgcttttgg
     1321 tagtgttact cccattgtaa gcatgaggta gccaacaaca ccaaggcgag ttgattctgc
     1381 aaaatccaca attttcctcc ttgtaaaata aaaaaagcaa gaacactcta aactgttctt
     1441 gcctaagcaa taatatttta taaactgtga tgaagtcctc cttaatgaca gattgtagaa
     1501 cgctcaaatc cttgatttat cagcgtttta agcacctgtc attattatga cacaatcccc
     1561 cccagggaaa gtcacaccag gccacttttc agacttccta tcctggacca acaccctccg
     1621 accgtctgta atcatgcaca tattggttaa gacaacttgt tctcgtctag acattcccta
     1681 tctccccaaa tcatcaaaat aatagagatt caaaaattct tcctcagtaa ctggacgttc
     1741 aaaattgtaa aaccagcgat agacttccac ggctggtcca tcaaactcta ccctgtcgtc
     1801 catttcttgc acaccggcaa tatgaaacaa acggctctgc ttccaaatac catccgcatt
     1861 gacatagcca tcttcaacta aaccacgcaa atagtctgct agtttgttct tatcaacctg
     1921 ctcatcatcc caaacaagaa cattggccgg cagcaagtag gtcacttctt cataagatga
     1981 gtaattctca taagtaggct caaactcgtt tttaaccaag cacttaacag cgtagaccct
     2041 atccatgata gctctccata gcctcctcaa cctccaccaa acttatccca aacaattcca
     2101 atcgtttgag gagttgtttg ccgttgcagt agccgatgcg gagcttctct cccagatact
     2161 ccctccgctt gcggctttca ccccccatca gcaatcctag gcgcattaga tctgacttgc
     2221 tgatgtcaaa gttattttca tcatcatagt agccacgcac gcctgcgagg gccttttcca
     2281 agtcctcaaa gctggcgtgc tcaatgccca aggaccgccc tgttgttttg gacttaggtg
     2341 tagcctcgtc ccgctgtaag aaggcgtgtt tgaccgtggg aatggcctgc ataatgattt
     2401 ttcgaatccg ctcgccattg tagtcggggt cagtaaagac aatgacgccc cgcaggtcat
     2461 ggagtttctc gatgcgttcc aagtcatcgt ctgatatggc agagcctctg gtttcgtagg
     2521 tatccacctc gtaaaatcgt tttaggtttg ctgtatcatc cttgccctcg acaacgagga
     2581 cttcttgtat cttaattttc tgagtcaatt ctgaacaagc tccttgcatt ctcgtaggtc
     2641 gctctcgcca cctcttcgac cgactggttg cgaagctggg ccagcatatc caccacatat
     2701 ctggtgtagc cggtgcgatt ttcccgacca cgcttgggaa ctggggccag gtagggcgca
     2761 tccgtctcga ccaggatttt ttctaggggc aatgcttgcg ccgcttcctg aagttcaacg
     2821 gcttttttga aggtcaccac tcccgagaag gagatgtgca tgcccaggtc catgaaagct
     2881 tgagcctcct ccagagtgcc agagaaggaa tgcatgatgc ctccacgcgg accgacgccg
     2941 acttccttga tgatctggta agtatcttcc aaagcatcgc gagtatggac cacaaagggc
     3001 aaatccaact gcttggccag ctccatctgt cgcttgaaaa cacgagcctg gatttcctta
     3061 tccgccgtca tccagtagta atccagtcca atctctccca gggcaatgac cttgggatgc
     3121 tggagggctt tgagcagata gttttccact tcctcgtcat aagtgccagc ctctgtcgga
     3181 tgccagccca atgtcagata aatttcaggg tgctggtcag caagctccat agccttgtca
     3241 atggttgcac ggtcaaaacc gaccacattg tggagggtga cccccatctc cttggcaaag
     3301 tctaattctt cttggacccg accgtcaaac tgctcgacgt tgaggtgggt atgggtatca
     3361 aaaatttgta tcatcgttcc atcactttct ttcctactat tgtaacatat ttcagaagat
     3421 tcttatgaga agaaaaaaaa ccagcagact cgagtttctg ctggcttctc ttttcatctt
     3481 cttatgctac tgtaagaact ttacgtccct tacggcgacg agcagctaac acgcgacggc
     3541 cgtttttagt tgccatacgg ctacggaaac cgtgtttacg cgcgcgacgg attttacttg
     3601 gttgaaaagt acgtttcacg atgaatacct cctcttagat tcttgtattc gtttagccgg
     3661 ctagttttga tcagttacta aacataccaa actattttat ataaattctg ttcgtttgtc
     3721 aagctattct gccatacttt taggaaagaa tcagaaaatc att
//
LOCUS       DASFQD010000159         3715 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.162, whole genome shotgun sequence.
ACCESSION   DASFQD010000159 DASFQD010000000
VERSION     DASFQD010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3715
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.162"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..3338)
                     /locus_tag="U1021_002106"
     CDS             complement(<1..3338)
                     /locus_tag="U1021_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014635954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM4712595.1"
                     /translation="MRKYHFGAASVLLGVSLVLGAGTQVVKAEEAVTSSEPTIASSVA
                     PASTEAVAEEAEKTNAENVGAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTE
                     DATLAKAIEDAQTKLAAAKAILADSEATVEQVEAQVAAVKAANEALGNELQKYTVDGL
                     LTAALDTVAPDTTASTLKVGDGEGTLLDRTTTATPSMADPNGATIAPHTLRDKVEATK
                     ESGWYTFESYDLNSYNRNQNGSIVGGTAVGAYMRYSLDSDPATSTVLAELVSTKDGEV
                     LESHKLEAGNSVTFSYPKTINAKNSNITLTYDTSTATADIPGSLKFYDDRDAVYSTVV
                     VPAYQVNTTRYVTEDGTVLATYSLQTIAGQTVTSSKVRTFTGYDYVKTTQNAIQGAYP
                     KGTLMLAGVGADKNGNKYYKAIREVVEDNQSVMTLYLLDPTYTGTVDWTGTDTTGFIP
                     LLKTSPTVYTIDRKVYDYNINATILSPYTVDNGFMVFKESATNAQGSKYRVVAQWSGT
                     DETDPTKPEYTGGKYGRIYIGTQVWTTAKELGITENQWRGTADKFDNNGFVPFGTQQY
                     LRNASVATAVETTHVYKVNPKFGDVIVEYYDTEGKQIVSSVVDTPKSALGTKYNTDED
                     RRPDRLVAADGTVYFYKEVKSGSASTTGAVVEGTTTVKYVYEKAGSVNVNFVDINGKV
                     IKAPVSDEKDAKPGYNYDTDLDQKIASITFEGKVYKLVPAGDYPVGKVGTGNNLIEVG
                     NNTAKGIDPTTGKIEAGVNKEVTYVYKAVTGSVVVNYKDTEGNVIKDPETDVSDAPVG
                     DAYTTTDKKPNEIITKDGSRYVLVPSKTDGEENGKVIEGTITVTYVYQKVANWIPEIP
                     NVPETNRPKVPYPFDPTEPDEPIDPTTPGTNGEVPNIPYVPGYTPVDPKDNTPLKPID
                     PNDPGKGYVPPTPENPGVDTPIPYVPVKKVVTNHVDEEGNPIAPQEEGTKPNKSIPGY
                     EFTGKTVTDEDGNTTHIYKKTPEVKNGTVVVNYVTEDGTVIKEPVTDTPTSPEGTPYD
                     TTDNKPKTITFKGEEYELVRVDGTENGKVVEGETVVTYVYRKVETPAKKVVTNHVDEE
                     GNPVAPQEEGTKPNKSIPGYEFTG"
BASE COUNT          999 a          802 c          664 g         1250 t
ORIGIN      
        1 ttacctgtaa attcgtaacc tgggattgat ttgtttggtt ttgttccctc ttcttgcggc
       61 gcaacagggt taccctcttc atcaacgtgg ttagttacaa ctttcttagc aggtgtttcg
      121 actttacggt aaacgtaagt cacaactgtt tcaccttcta caactttacc attttctgta
      181 ccgtcaacac gaaccaattc atactcttca cctttgaaag tgattgtctt aggtttgttg
      241 tctgtagtgt cgtatggtgt gccttctgga gaagttggtg tatctgttac aggttccttg
      301 ataactgtgc catcttctgt tacatagtta acaacaactg taccattctt aacttctggt
      361 gttttcttgt agatgtgagt tgtgttgcca tcttcgtcag taacagtttt acctgtgaac
      421 tcgtaacctg ggattgattt gtttggtttt gttccctctt cttgcggtgc aataggatta
      481 ccttcttcat caacgtggtt agttacgact tttttaactg gaacataagg aattggtgta
      541 tcaacacctg gattttctgg tgttggtggt acataaccct tacctggatc atttggatca
      601 attggtttca acggcgtgtt atccttagga tcaaccggtg tatatcctgg aacgtaagga
      661 atatttggaa cctcgccatt tgttcctggt gtcgttggat cgattggctc gtctggctct
      721 gttgggtcaa atgggtaagg tacttttgga cggtttgttt ctggtacatt tggaatctct
      781 ggaatccagt ttgcaacttt ctggtaaaca taagttactg tgattgttcc ttcgataact
      841 ttaccatttt cctcaccatc tgtcttagat ggaacaagga catagcgtga tccatctttt
      901 gtgatgattt cgtttggttt cttgtcagtt gtagtataag catctccaac cggtgcatca
      961 gacacatccg tttctggatc tttaatcaca ttaccttctg tatctttgta gtttacaact
     1021 acagaacctg tcactgcttt atacacatag gtaacttctt tgttaacacc agcttcaatc
     1081 ttgcctgttg ttgggtcaat acctttcgca gtattattac caacttcaat caagttattt
     1141 ccagttccaa ctttaccaac cggataatca ccagcaggaa caagtttgta caccttgcct
     1201 tcaaaagtga tggaagctat tttctgatcc aagtcggtat cataattgta accaggtttc
     1261 gcatcttttt catctgaaac aggagctttg attactttac cattgatatc aacgaagtta
     1321 acattaacgc taccagcttt ttcgtaaaca tacttaacag ttgtcgtacc ttcgactacc
     1381 gcacctgtcg tactagctga accagatttc acttctttgt agaaatatac tgtgccatca
     1441 gcagcaacca atctatctgg tctacggtcc tcgtcggtat tatacttagt accaagagct
     1501 gacttaggag tatccacaac tgaacttaca atttgtttcc cttcagtatc gtagtactca
     1561 acaatgacat caccgaattt aggatttact ttgtagacat gggttgtctc tacagctgta
     1621 gccactgaag cgtttcggag atattgttgg gtaccaaatg gaacaaaacc attattatca
     1681 aacttatccg ctgtacctct ccattggttt tcggtaattc ccaattcttt tgcagttgtc
     1741 caaacctgag taccaatata gatacgtcca tactttcctc cggtatactc tggtttagtt
     1801 gggtcagttt catctgtgcc tgaccactgt gcaacgacac gatatttact accttgagca
     1861 ttggtagcac tttccttgaa gaccatgaaa ccattatcaa ctgtgtaagg agataaaata
     1921 gttgcgttga tattgtaatc atatactttt cgatcaatag tataaactgt tggagatgtc
     1981 tttagcagcg gtatgaatcc cgtcgtatca gtcccagtcc aatctacggt acccgtataa
     2041 gttggatcca ataagtacaa tgtcataacg gattgattat cttcaacaac ctcgcgaata
     2101 gctttataat atttattacc atttttgtca gcaccgacac cagctagcat aagtgtgcct
     2161 ttaggataag caccttgaat agcattttgc gttgttttca catagtcata accagtaaaa
     2221 gtacgtactt tagatgaagt aaccgtctga cctgcaatag tttgaagact gtaagtcgcc
     2281 aaaactgtgc catcttcagt aacatagcga gtcgtattaa cttgatatgc aggcactaca
     2341 actgtagaat atactgcatc tctatcatca taaaatttca acgaacctgg aatatcagcg
     2401 gtagctgttg aagtatcata agtcaaagta atgttgctat tcttcgcatt aatcgtcttc
     2461 ggataactaa aagtcacact attcccagcc tcaagtttat ggctttctaa gacttctcca
     2521 tctttagtac tcactagctc cgctagtaca gttgatgtag ctggatccga gtccagagaa
     2581 taacgcatgt aagcgccgac agcagttcca ccaacaattg aaccattctg gttccgattg
     2641 taggaattta aatcatatga ttcaaaagta taccaaccag attcttttgt agcctcaact
     2701 ttatctcgaa gtgtatgagg agcaatagta gcaccatttg gatcagccat tgaaggtgtt
     2761 gctgttgtcg ttctatctag aagggtacct tcgccatcgc caactttcaa tgttgatgca
     2821 gttgtatcag gtgctactgt atcaagtgct gctgttaaga gaccatctac agtgtatttt
     2881 tgcaattcat tccctagcgc ctcgttggct gctttaaccg ctgcgacttg cgcttcaact
     2941 tgctcaacag ttgcttctga gtcagccaaa attgccttag ctgctgcaag ttttgtttga
     3001 gcatcctcta tagcttttgc aagagttgca tcttcagttt tagccaactc tttttgacca
     3061 agaccagcca aaagcggtga ttctgatgtt acctgttcaa gaacagcttt cgctttttca
     3121 acttctgtcg aagtcgtagc tacagcaccc acattttcag catttgtttt ttctgcttct
     3181 tctgcaaccg cttctgtcga agcaggcgct acactactgg caatagttgg ttctgatgaa
     3241 gtaacagctt cctcagcttt aacaacctgt gtaccggcac ctaaaactaa cgacacacca
     3301 agcaaaacac ttgctgcacc aaaatgatac ttacgaatcg aaaattgttg tttcgtgtgc
     3361 cgtaccagtc aaatgatttt ttatttgctc tacgcataaa aaatccccca tataaatatt
     3421 aatttaatta cacaaatttt ctactctttg tatcaaagcc ttgaaaactc ccgcaatcat
     3481 ccgaggtatt atactacaaa taactttaaa tgccaagtaa tattataaaa ttcctcaaaa
     3541 aaacattatg aattcgcttc aattcgagaa gaaaccagta tattcatagt tttttacata
     3601 ttttttaaga aatttcactt ttgagaattt ctataaaatt accgacaccg caaaaatatt
     3661 agctccatat cttgtattct tatacatata gccaataata aatagtcaat aaatt
//
LOCUS       DASFQD010000160         3700 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.163, whole genome shotgun sequence.
ACCESSION   DASFQD010000160 DASFQD010000000
VERSION     DASFQD010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3700)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3700)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3700
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.163"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..958)
                     /locus_tag="U1021_002107"
     CDS             complement(<1..958)
                     /locus_tag="U1021_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM4712596.1"
                     /translation="MSYYYEKLTGKVAKHLARFPYYATDKILNLMQFQDSNQQFLISD
                     KHLYDYFEEQKHQLSTDEKLSILFSLFKGRIDVYAKSYIDENGKINYFPSYNYGWKKL
                     PVGKRTCQPLTKQVLLAHLRGEISIGIFPMSLSDTCSFLAIDFDKNNWREEVSILRDT
                     AEQHGFEGHIEISRSGNGAHLWFFFEEEIACQQARNVGKRLLELAMQESKDIRFSSFD
                     RMFPNQDILPKGGFGNLIALPLQGEAFKKGRTVFVDKHFQPFSEQWTYLQQVQKIDQK
                     KILDFLGQEFSDTVDDTVLDCSLSNVIQVEKRAISSKTNYLLR"
     gene            complement(1057..1859)
                     /locus_tag="U1021_002108"
                     /pseudo
     CDS             complement(1057..1859)
                     /locus_tag="U1021_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922020.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
     gene            complement(2224..3660)
                     /locus_tag="U1021_002109"
     CDS             complement(2224..3660)
                     /locus_tag="U1021_002109"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712597.1"
                     /translation="MRFINLTIKEGFFSKNFDFGDKTAIYSHINSVGKSTLLRLLFYS
                     IGYSIPSTKKIRFDKLETILYLETVEGICEIYRKDKDIVLKCIDSETWKLRLPKDLEF
                     ILQKIFNIRNSDVLLNIIGAIYLDQDKGWTLLNRGTVIGGIKFKIDQLIQGMLNIEPL
                     QALNVELEEVVEGISRLKQLKKIVDYQHENTTIIKESNFESTKLLDLEKNLSMIMGKI
                     SSLESEKDTLRVTLEKNEEYLAYLENLHLFIKAPESGEEFLLKKEFVKGFGAYQKIIE
                     LKIYNLERKIKELRKKEEKIRIEIRDSEKFFNTENTIELFENRLNLLVVPKETIDSEL
                     SRLKNRKKELESIRLNYLSSELMQKIYENIMYFAKKLDVAEYLEHEKDFILTSDLKSY
                     SGTILHKLVFCFKLAYIVELQKYLGFRLPIVLDSPSGREVDQKNIEDMFKILNEDFVD
                     NQIIIASIFEYPLYSPDKIIKINKNLLE"
BASE COUNT         1171 a          694 c          554 g         1281 t
ORIGIN      
        1 ttctcaataa gtaatttgtt tttgaagaaa tagccctctt ctcaacttga ataacgtttg
       61 ataagctaca atctaatact gtatcatcta cagtatccga aaactcctgt cctaagaaat
      121 ctagtatttt cttctggtca atcttttgaa cctgttgaag ataggtccat tgttcagaaa
      181 agggctgaaa atgtttatca acaaaaacgg ttcttccctt cttgaaagct tccccttgta
      241 agggcagtgc gataagattg ccaaaccctc ccttgggcag aatatcttga tttggaaaca
      301 tacggtcaaa tgaagaaaag cgaatatctt ttgactcctg catagccaat tccagcagtc
      361 tttttccaac atttctcgcc tgctgacaag caatttcttc ctcgaagaaa aaccagagat
      421 gagcaccatt gcccgaacga gagatttcga tatgcccctc aaaaccatgt tgttctgctg
      481 tatctcttag aatggagacc tcttctctcc aattattttt atcaaaatca atcgccaaaa
      541 aggaacacgt gtctgataaa ctcattggaa aaatgccaat actgatttcg ccacgtaggt
      601 gagccaataa tacctgtttg gtcaagggtt gacaagttct ctttccaaca ggaagttttt
      661 tccaaccata gttgtaagaa ggaaaatagt tgatttttcc attttcatca atataagatt
      721 tcgcataaac atctatacgt cccttaaata ggctgaacag aatggagagt ttttcatcgg
      781 tacttagttg atgtttttgt tcttcaaagt aatcatacaa atgcttatca cttatcagaa
      841 attgctgatt gctatcttga aattgcatta aattcagaat cttatcggta gcataatagg
      901 gaaaacgagc aagatgcttt gcaaccttac ccgttaattt ttcataataa taagacatgt
      961 gagttcctcc aaattgccta ttgagactat caacgaaaag tcaaaagccc aagtattcac
     1021 tggtctattt ccggattgaa aactatcctg tctttattaa tattcatcta tccccaactc
     1081 ctcgtacatc ctctcacttg ataaatcatt ctgaccgttc aagaggagat tctcaaagaa
     1141 ggcggttaaa aagtctgagc gtttattgac taacttagca ttgtcaagta caagggcatc
     1201 gcggaaatat ttggcatgtt tttgaaaagg ctccttgtca atgtcgaaac caaatgagcg
     1261 aaggtattgg ataagaaata cggtgattgt tcgagtattc ccttcacgga atggatggat
     1321 ttgccaaata cctgaaataa aggattgaat atggcaacaa tagcattttt tatctaatcc
     1381 agcatagaaa aatctctttc ttgctggaaa tcatagtcta gagtcgcagc aatcagtgga
     1441 aaatcagaat aaatgactgt gtcccctttt aagactggtt cattttttgt aatgttgacg
     1501 gtacggtatt tgccaactgg aatattgctg tcaaaaacac cttgaaagag ctctttgtgg
     1561 atatgtaaga gagtgggtgg tcgaaggcta aaaccatttt gggagagcat ttcaacaatt
     1621 cggagagaga caagatctgc ctcttgtgta ctggcatcag ttgactggtg gtattttgta
     1681 atttcctcat acacctgttc ataggtgtat tctccacgag cttgcctatc agccaactcc
     1741 tccatataaa cagatggagt caacccatcc gctttttgaa gaccaaaacc cgtttcccag
     1801 agttcttgct tggcttcata cgaaagattg ggattatcaa tattgtaggt tggttgcata
     1861 gactcctcct gtttgaattt ctagcattat tataccacaa aacccagcca ttttaggctg
     1921 ggcatttgtt taatctagta tggctaaaat cagctcgata agactgtagt gggtaaaagt
     1981 actgtggcga ctatgtagcc ttttaaaata taaaataatg acttatatgc gtaactataa
     2041 aaagtgcttc atttatacca ttaaataaag tcatatagga taaatccaaa ataaaaataa
     2101 ttaatcttga ttcctaagaa cagaaataag aaagcggtgt tcagatttca ccccccctgc
     2161 tggtgtgaac ttacagaatt tgtcatgtaa gcacctgttt tataaaaaat ataaaactaa
     2221 aaattactct aataaatttt tattaatctt gattatctta tctggtgaat atagagggta
     2281 ctcaaaaatc gaagcgatga ttatctgatt atccacaaag tcttcattaa gaattttaaa
     2341 catatcttca atatttttct gatccacttc tcgtccacta ggtgaatcta agacaatcgg
     2401 caacctaaag cctaagtatt tttgaagctc gacaatatat gctaacttaa agcaaaatac
     2461 tagcttgtgt aaaatagtcc cgctataaga cttcaaatca gaagttaata taaagtcttt
     2521 ttcatgctct aaatactctg ctacatctaa ttttttcgca aaatacatga tgttctcgta
     2581 aattttctgc atcaattcac ttgataagta gtttaaacgt atcgactcta attctttttt
     2641 tctatttttc aaccgtgata attctgaatc aattgtctct ttgggtacaa ccaagagatt
     2701 taatctattc tcaaataact ctattgtatt ctcagtatta aagaattttt ctgaatccct
     2761 aatctctatc cttatttttt cctctttttt tcttaattcc ttaattttac gttctaaatt
     2821 ataaattttt aactcaataa ttttctgata ggctccaaaa cctttgacaa attctttttt
     2881 taatagaaat tcctcccctg attcaggtgc tttaataaat aaatgtaagt tctctaaata
     2941 cgctagatac tcttcatttt tttcaagagt taccctcaag gtatcttttt ctgattctaa
     3001 gctacttatt tttcccatta tcatagacag atttttttct aaatccaata atttagtcga
     3061 ttcaaaattt gattccttga taattgtagt attttcgtgt tggtaatcaa ctattttctt
     3121 cagttgtttt aatctagaaa tcccttcaac tacctcctct aattcgacat ttaaagcctg
     3181 aagaggttct atatttaaca taccttgaat tagttgatca attttaaatt taattcctcc
     3241 aataacagtt cctcgattta ataatgtcca tcctttatct tgatctaaat atattgcccc
     3301 aataatattc agtaaaacat ctgaatttct tatattaaaa attttttgaa gaataaactc
     3361 taaatcttta ggtaacctta atttccaagt ttcagagtct atacatttta gaacaatatc
     3421 tttatctttt ctataaattt cacaaattcc ttctactgtt tctaaatata atattgtttc
     3481 taatttatca aaccttattt ttttcgtaga gggaatactg taacctatcg aataaaataa
     3541 gagacgaagt aacgtcgact tccctacgct attaatgtgg ctataaatag ctgtcttatc
     3601 tccgaaatca aagttttttg aaaaaaaacc ttcctttatt gttagattaa taaatctcat
     3661 ttaaagccat cccttctgtg atagtctcta tgccaactct
//
LOCUS       DASFQD010000161         3375 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.164, whole genome shotgun sequence.
ACCESSION   DASFQD010000161 DASFQD010000000
VERSION     DASFQD010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3375)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3375)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3375
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.164"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            164..1240
                     /locus_tag="U1021_002110"
     CDS             164..1240
                     /locus_tag="U1021_002110"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEM4712598.1"
                     /translation="MTEKTIVFKVGTSSLTQENGSLDRIKIARITNQLAQLHQKGYQI
                     VLVTSGSIAAGFRRLGFDKRPTKIAENQASAAVGQGLLIEEYTQNLMKDGIVSAQILL
                     TQDDFADARRYQNASQALQVLLKQRAIPIINENDTIAIEEIKVGDNDTLSAQVASLLK
                     ADLLVLLTDVDGLYTANPNSDPTAQHLPEIKEITEDLFAMAAGAGTSNGTGGMTTKLQ
                     AAQIATKSGVPVFICSSKEDTALLQAVTQANRGTLFLADGHAMNQRKQWMAFYARTDA
                     AVEVDAGAVDAMLHQGRSLLAAGVKALEGDFEVGQVVEVYSQADHRLIGKGRVKLSSR
                     DLQDQLANGRAEGVLIHRNDWVSL"
     gene            1250..2488
                     /locus_tag="U1021_002111"
     CDS             1250..2488
                     /locus_tag="U1021_002111"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEM4712599.1"
                     /translation="MTTTQALLDSLLAHKASINLATTEQKNQALSAMADQLVAQTEAI
                     LAGNAIDMEHAQGKISQVMQDRLLLTAERIEAMADGIRALIGLPDPVGLTLEETTRAD
                     GLHIRKKSIPFGLVGMIYESRPNVTSDAAALAIKSGNAVILRGGKEAFHSAQAIVTAL
                     KAGLEEVGLSPKVIELVQDTSRVSATELMTAKGKIDLLVPRGGAGLIQAVVENATVPV
                     IETGTGICHVYVDKDADLDKALRIVVNAKTSRPSVCNAAEVLLVHEEIASQFLPRLEE
                     ALSGQVELRADSQAQALLNQATPAGDQDFDTEFLDYILAVKVVSNVEEAISHIAQHST
                     GHSEAIVTENSQTADRFTLHVDSAAVYVNASTRFTDGGEFGLGCELGISTQKMHARGP
                     MGLREMTTYKYIITGDGHIR"
     gene            2498..3283
                     /gene="proC"
                     /locus_tag="U1021_002112"
     CDS             2498..3283
                     /gene="proC"
                     /locus_tag="U1021_002112"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEM4712600.1"
                     /translation="MKIGFIGLGNMGAALAQAVSQQPDTQLLLSNHNPAKAQALQAQL
                     GGQLFSNGEIAEQAEIIFLGVKPHLIQSILSGLQDQISQNPSAIWISMAAGVTLDSLA
                     EFVSADKLIRIMPNTPVAIGQGMTTYSLVNQELAPLLEQILEKSGKVQQVPESLIDAA
                     TAIAGCGPAFVYQMIEAMTDAGVQNGLTAQDAKVLAAQTLAGTAQMVLNSDKHPAQLR
                     QEVTSPGGSTIAGVVALEKEGFRYAIIKAVAAALKKTRKLGKK"
BASE COUNT          885 a          805 c          883 g          802 t
ORIGIN      
        1 agtagccgct gggctttttg cccagcctct ttgtttccag cgttttttaa tgctactcat
       61 gattaggaat ctattccctc tctccttgcc gaataacagt gattttcttt atgattaaaa
      121 tatggtataa ttttccaaat attagttttt gtgagaagag attatgacag aaaaaacgat
      181 tgtatttaag gtagggacca gctctctgac ccaagaaaat ggcagtttgg atcgaattaa
      241 gattgctcgg attaccaatc agttggctca gttgcatcag aagggctacc agattgtgct
      301 ggtgacgtcg ggctcgattg ctgctggttt tcggagattg ggatttgaca agcgaccgac
      361 caagattgcg gagaatcagg cttctgcggc tgttggtcag ggcttgctga ttgaggaata
      421 cacgcagaat ttgatgaaag atggcattgt gtctgctcag attttgttga cccaggatga
      481 ttttgcggat gccagacgtt atcagaatgc ctctcaagcc ttgcaggtct tgctcaaaca
      541 acgtgctatt cctattatca acgaaaatga taccattgcc attgaagaga ttaaggtagg
      601 ggataacgat actttatctg ctcaggtggc ttctctcttg aaagcagacc tcttggtgct
      661 cttgacggat gtggatgggc tttatactgc aaatcccaac agcgatccga ctgcccagca
      721 tttgccggaa atcaaggaaa ttacggaaga tttgtttgcc atggcagcag gagcaggaac
      781 gtccaacgga acaggtggca tgaccaccaa attgcaggcg gcacagattg cgaccaagtc
      841 aggcgtacct gtctttatct gctcgtctaa ggaggatacg gcccttttac aagccgttac
      901 ccaagccaac cgtggcaccc tctttttagc tgacggccac gccatgaacc aacgcaagca
      961 gtggatggct ttctacgctc ggacagatgc agcagttgag gtggatgctg gtgcggttga
     1021 cgccatgctg caccaaggcc gcagtttgtt agctgctggt gtcaaagccc tggaaggcga
     1081 ctttgaggta ggacaggtcg tggaagttta cagtcaagca gaccaccgtt tgattggtaa
     1141 agggcgggtc aaactctcgt cccgggactt gcaggaccag ctggcaaatg gcagagcgga
     1201 aggcgtgttg attcaccgca acgattgggt tagcctatag gagaaagtta tgacaacaac
     1261 acaagcatta ttagacagtt tattggccca caaggcctct atcaacctgg caacaaccga
     1321 acaaaagaac caggccttgt cggctatggc agaccagttg gttgcccaaa cagaggcgat
     1381 cctagctggc aatgctatcg atatggaaca tgcccaaggc aagattagcc aagtcatgca
     1441 agacagattg ctcttgactg ctgagcgaat tgaagccatg gcagatggta ttcgtgcctt
     1501 gattggcttg ccagatccag ttggtttgac cttggaagaa accactcgag cagacggctt
     1561 acatattcgc aagaaatcca ttccctttgg tttggtgggg atgatttacg aaagccgtcc
     1621 aaatgtgact tcagatgccg cagccttggc gatcaagagc ggaaatgcag ttatcttgcg
     1681 tggtggcaag gaagcctttc attcagctca agctattgtc acagccctta aagctggttt
     1741 ggaagaggtt gggctatcac ctaaggtcat cgagttagtc caagatacca gccgggtctc
     1801 tgcgaccgag ttgatgactg ccaaaggaaa gattgacctc ttggtgccac gtggtggtgc
     1861 gggtctgatt caagccgtcg ttgaaaatgc gactgtgcca gttatcgaaa caggcacagg
     1921 tatctgccat gtctatgtgg acaaggatgc ggacttggac aaggccttgc ggattgtggt
     1981 caatgccaaa accagtcgtc cctcagtctg caatgcggcg gaagttttgt tggtccatga
     2041 agaaattgcc agccaattcc tacctcgctt ggaagaagct ctttctggtc aggtggaatt
     2101 acgtgccgac agtcaggccc aggctcttct caaccaagcc acaccagcag gcgaccaaga
     2161 ttttgacacg gaatttctgg actatatctt ggctgtcaag gtcgtttcaa atgtagaaga
     2221 ggctatcagt catatcgctc aacactcgac tggacacagc gaggccattg tgacggaaaa
     2281 cagccaaacg gcagatcgtt tcacactcca tgtagattcg gcggcagtct atgtcaatgc
     2341 ctcgacccgc ttcacagacg gtggcgagtt cggtctgggc tgtgaattgg gcatttctac
     2401 ccagaagatg catgctcgtg gtccaatggg cctgcgtgaa atgaccactt acaagtacat
     2461 catcacaggc gacggccaca ttcgttagga ggacaggatg aagattggat ttatcggact
     2521 gggcaatatg ggagcggctc tggcccaagc ggtcagccag cagccagata cccagctcct
     2581 cctcagcaac cacaacccgg caaaagccca ggctctacaa gctcagctgg gcggtcagct
     2641 tttttctaat ggggaaatag cagagcaggc cgagattatt ttccttgggg tcaagcctca
     2701 cctgattcag tcaatcttgt caggcttaca ggaccagatc agccagaatc cgtcagctat
     2761 ctggatttct atggcagcgg gagtgaccct tgacagcctg gcagaatttg tgtcggcaga
     2821 caagctcatc cgcatcatgc ccaacacacc ggtcgctatc ggccaaggca tgacaaccta
     2881 tagcttggtc aatcaagagc tcgctccgct attggaacaa atcctagaaa aatcaggcaa
     2941 ggtccagcag gtgccagaga gcctgatcga cgcagcaacg gctatcgcag gctgcggacc
     3001 agcctttgtc tatcagatga ttgaggctat gacagatgcc ggtgtgcaaa acgggctcac
     3061 agctcaagat gccaaggttc tggctgcaca aaccttggct ggaactgccc agatggtctt
     3121 gaatagcgac aagcacccag ctcagctgag acaagaagtg acctcgccag gcggctcgac
     3181 tatcgcaggc gtggtagccc ttgaaaaaga aggcttccgt tacgccatta ttaaggcagt
     3241 cgccgccgcc ctcaaaaaga ctagaaaatt aggcaaaaaa tagaagacag caaaaaacgg
     3301 gacttttaat ccaatgtcat taagttaagc atttaaacaa ttaaaggaac tattcccgtc
     3361 cgagcaattg atgac
//
LOCUS       DASFQD010000162         3350 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.165, whole genome shotgun sequence.
ACCESSION   DASFQD010000162 DASFQD010000000
VERSION     DASFQD010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3350)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3350)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3350
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.165"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(749..1891)
                     /gene="tgt"
                     /locus_tag="U1021_002113"
     CDS             complement(749..1891)
                     /gene="tgt"
                     /locus_tag="U1021_002113"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEM4712601.1"
                     /translation="MTDVPIKYRLIKKEKHTGARLGEIITPHGTFPTPMFMPVGTQAT
                     VKTMSPEELKEMGSGIILSNTYHLWLRPGDELVARAGGLHKFMNWDQPILTDSGGFQV
                     YSLADSRNISEDGVTFKNHLNGSKMFLSPEKAISIQNNLGSDIMMSFDECPQFYQPYD
                     YVKKSIERTSRWAERGLKAHRRPHDQGLFGIVQGAGFEDLRRQSAHDLVSMDFPGYSI
                     GGLAVGETHDEMNAVLDFTTPLLPENKPRYLMGVGAPDSLIDGVIRGVDMFDCVLPTR
                     IARNGTCMTSRGRLVVKNAQFAEDFTPLDPECDCYTCKNYTRAYLRHLLKADETFGIR
                     LTSYHNLYFLINLMKNVRQAIMDDNLLEFRQDFMEKYGYGKNGRNF"
     gene            2211..3053
                     /locus_tag="U1021_002114"
     CDS             2211..3053
                     /locus_tag="U1021_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF975 family protein"
                     /protein_id="HEM4712602.1"
                     /translation="MFTISNIRERARQTLNETPGIYQVAVIPVTISVIVQLISFSRNS
                     LAGVTTEELASPSYFISTSLFPIFYGLLLGLLHLSIICTIFHLIKGVKTSTSFNDVLM
                     IFNHKDFWKIFRTYILTSFLLFLWGLLFYLGIGLLIGAGTMITIIAASSQSLDPDALP
                     MEILAILGLMAMGGILLMVLGIALYIPQFYAYSQVEYILFEQLEREEYTGAFSIIRSS
                     RKLMKGYKFKRFTLDLSFIGWFLLVIITFGLAGLYVWPYHYAAQLHFHEEILDDQAKK
                     MSYV"
BASE COUNT         1029 a          679 c          595 g         1047 t
ORIGIN      
        1 aaaaagagta ggctttccaa atggaaatca tgattgaaat ctgctgtaac attgatgtct
       61 accagtaatc catattggtt gaattctata caggacacta tataccaata aacctaagaa
      121 aattcagaat aaattcggaa taacaactta gccccatcaa aaggctcaaa ctttgtaata
      181 cgtcgtataa gacagtcttg tacaaaagct ggtgagagat tctacgtaga ttacttgatc
      241 aatcgagaat tcacagccca aaaccaaata ttgaataatg atatcacata attacaatac
      301 agtttaggtg tcagaactta tctcaatgct attaaataga aatatgattg tgttctatca
      361 tctcttatga gaattgtcat cataatgtta gcccactaga tatgaagacc attaagaagg
      421 cattggagct aaatccaggt gcaacacctc tgattcacag cgatcgtgta gccagcatac
      481 ttacaattaa tctcaagaag gttacagaaa acttttgtac aaaatttgaa gaattaactt
      541 tcagttaaca ccaattacaa aatgtagtgt ttagacaata aaaaaaagcg atttccaaaa
      601 atgaactgca ccccaaaagt tagacacaaa atctaacgat tggggtgttt ttcttatgaa
      661 attaagttag aaattataga gccaaattat tttaatcatg cttattatcg aaagttcatt
      721 ttcaaatatt ttagggttat tttcaacgtt aaaagtttct accattcttg ccataaccat
      781 atttttccat aaagtcttga cggaactcca ataaattatc atccataatg gcttgacgga
      841 catttttcat caaattaatc aagaagtaga ggttgtgata acttgtcaaa cgaataccaa
      901 acgtctcgtc ggccttaagt aaatggcgga gatacgcacg tgtatagttt ttacatgtgt
      961 agcaatcgca ctctggatct aacggtgtaa agtcctcagc gaactgagca tttttcacca
     1021 caagacgtcc acgactggtc atacaggttc cattacgcgc aatacgtgtt ggtaatacac
     1081 agtcaaacat atcaacccca cgaatcacgc catcaatcaa gctatctggt gctccaacac
     1141 ccatgagata gcgtggttta ttctccggta aaagaggggt cgtgaagtcc agtacagcat
     1201 tcatttcatc gtgtgtttca ccaacagcca atcctccaat agagtatcct ggaaaatcca
     1261 tgctaaccaa atcatgggct gattggcgac gaagatcttc aaaaccagca ccctgtacaa
     1321 taccaaataa accttggtca tgcggacggc ggtgagcctt gagaccacgt tctgcccaac
     1381 gacttgttct ttcgatggat ttttttacat aatcataagg ctggtagaac tgcggacact
     1441 catcaaagct catcatgatg tctgagccta gattgttttg aatggaaatg gccttttcag
     1501 gtgacaggaa catcttacta ccattgagat ggtttttaaa tgtaacacca tcttctgaga
     1561 tattgcgact atcggccaag gaataaacct gaaagccacc tgagtcagtc aaaatcggtt
     1621 gatcccaatt cataaacttg tgcaaaccac ctgcacgcgc caccaattcg tcacctggac
     1681 gaagccacaa atgataggta ttggacagga taatgcctga acccatctct ttcaattctt
     1741 caggcgacat ggtttttacc gttgcctgag ttccaactgg cataaacatt ggagttggaa
     1801 aggtcccgtg tggggtaatg atttcgccca aacgtgcacc tgtgtgcttt tctttcttaa
     1861 tcaagcgata cttgattgga acatctgtca tgttttattt acctcccgct aggaaaaaca
     1921 gtcctaggat attagttctg gattcacagt tcagctcttt catatcatcc ataaaagtac
     1981 tttacctgga aatacagttt ctcaatcttg catggtctaa tccatcagaa tgtctttaat
     2041 gttctcgctt atttcagcga tatttacctt atcttctact tatttaatgg taaatagaca
     2101 ggcgcatcac aacaaactga caaattacca cagcaccttc cagtctatca aaaaaagcct
     2161 agcttgtcat ctagaattat gttacaatat tcagcaagga ggttatgtag atgtttacaa
     2221 tttctaatat acgtgagcgg gctcgccaaa cactaaacga gacacctggt atatatcaag
     2281 tggccgtcat ccccgtcact atttctgtta tcgttcagtt aatttctttc tctcgcaata
     2341 gccttgctgg agtaacaact gaggaacttg ctagtcctag ctactttatt tctacctcct
     2401 tgtttccaat attttacgga ttgctattag gactactgca cttatccatt atatgcacta
     2461 tatttcatct tatcaaaggg gtaaaaactt ccacatcatt taacgatgtg ctgatgattt
     2521 tcaatcataa agatttctgg aaaatctttc gaacctacat tttaacaagt ttcttgctct
     2581 tcctttgggg actactgttt taccttggta ttggtttact tatcggtgct ggaacgatga
     2641 ttacaatcat agctgcatcc agtcaatcct tagaccctga tgcacttcct atggaaatcc
     2701 ttgccatact agggctaatg gccatgggag gtatcctact tatggtttta ggaattgctc
     2761 tttatattcc acaattctat gcttattcac aggtagaata tatcttgttt gaacaattgg
     2821 aacgcgaaga atatacaggc gctttttcaa tcattcggtc tagtcgaaag ttgatgaaag
     2881 gttacaagtt taaacgcttt acacttgatt tatccttcat tggctggttc cttcttgtca
     2941 ttattacatt tggcctggct ggtttatatg tatggccgta tcactatgct gcacaactgc
     3001 acttccatga agaaatttta gatgatcagg ctaagaaaat gagttacgta taaaaataag
     3061 agcgatatct gctcttattt ttatatacac ttttatgtct atatttaaga aaaaaatata
     3121 gtagtaattg gtaaaaacat ttggattgtg ttatactatg actgaggagc gacaaagaac
     3181 tattttagcc tgcttggtat tggagcagat ttcttccttt ctatttttta cgccatgtgt
     3241 agtaatttgt tccaattcta agcgctcctc cttagagtca tccggcagtt caatggttca
     3301 ttgaactgct ttttcgatga aaaagggagt gggaaagaac tcgaccagtc
//
LOCUS       DASFQD010000163         3348 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.166, whole genome shotgun sequence.
ACCESSION   DASFQD010000163 DASFQD010000000
VERSION     DASFQD010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3348
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.166"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..829
                     /locus_tag="U1021_002115"
     CDS             <1..829
                     /locus_tag="U1021_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transketolase family protein"
                     /protein_id="HEM4712603.1"
                     /translation="SSMATNKLSSVLGGRYVNVGIMEQEMVGVAAGLSLLGYNPYIHT
                     FGPFASRRVYDQVFISLAYAQLNATVIGSDAGVSAEMNGGTHMPFEELGLMRLIPKAR
                     VYEVSDDIQFHAVLEETTQLDGLKYIRTIRKAPTAIYQGGEDFSKGYCVLRQGEDMTL
                     LASGIMVEQALKAADQLEAQGVSVQVIDLFRIKPIHEDIPALLSGRPVLTVENHNRIG
                     GLGSSICELMATDLTTPVHRIGIEESFGQVGQQAYLMDVYGLTAEHIVKQAQSMLQQ"
     gene            complement(917..1465)
                     /locus_tag="U1021_002116"
     CDS             complement(917..1465)
                     /locus_tag="U1021_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4712604.1"
                     /translation="MITIAPMTEDYLHTLWKIGHREAAPRWKEFAAPYFDDYQACATF
                     EDFQALELYQWLQKDCVRAILVDQLPIGFVSYYWECQPTRWLEIGIEIYDDKVWGKGY
                     GTAALQLWIDTIFQQFTELEHIGLTTWSGNKGMMRTAEKLGMTKEAHIRKVRYWQGHY
                     HDSIKYGILREEWVENKKKSSS"
     gene            1545..3311
                     /locus_tag="U1021_002117"
     CDS             1545..3311
                     /locus_tag="U1021_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEM4712605.1"
                     /translation="MKKIQREFQKIYYNLDKILLLFFTLFTFMEFVWIPLNSWISEGL
                     LAMTGHAYLSPTNLLAVFAENPLVTGLFILLFFVNIAIAYLELALLFTGVWQLLDEKV
                     KHLPDYLRDVRDSMVAIIRHSSLPKVLFLLFYSVILLPSLRRVLNIYYFNKIVVPQFI
                     VDYLSNTVWLGILILFVLLLFFWLASRFMYALPNIYFEHRSVKESIAYSWKKTKGRKQ
                     VSSFFRLIWLVTFPVLLFTGIGILLYLVQLVAEPYLPDTGPSYWLAVVCYAILKLAYY
                     GVVALFMMGFVSLLTGKQLPNYRRKRLRHRLRLAILLVSSLVFGTQGALALYYPFDTL
                     PVTISHRGVDNGNAVQNSIEALEKTSQLKPDYIEMDVQETKDGQFIVMHDTDLLALTG
                     NPGGTHDYTLAELTGMTASENGMVAPVPSFDEYLEKADELGQKLLVEIKVTKADSPKL
                     TQNFLKKYGQRLIAKGHQMQSLDYRTIIEIKQYSEKLVSFFILPFNSIYPTTVADGYT
                     MEYTSLDQNFMTKSWIRGKSVYAWTPNEEESMTKMLLLQVDGIITDNMTDLQSLMEEM
                     KENRRYPDLFFQQFQSLIYNFE"
BASE COUNT          921 a          686 c          720 g         1021 t
ORIGIN      
        1 tagctctatg gccacaaata aactgtcctc tgttctgggt ggacgttatg tcaatgttgg
       61 cattatggag caggaaatgg tgggggtagc ggctggtttg tcccttctgg gttataatcc
      121 atatattcac acctttggcc cctttgcaag tcgtcgtgtt tacgaccaag tatttatttc
      181 cttggcttat gcccagctta atgccacggt cattggttcc gatgcgggag tatcagctga
      241 gatgaatggc ggtacgcata tgccatttga agagttggga ctaatgcgac tgattccaaa
      301 agctcgtgtt tatgaagtca gtgacgatat ccagttccat gctgtccttg aggaaacaac
      361 acagctagac ggcctcaagt atattcgcac gattcggaaa gcgccaacgg ctatttatca
      421 aggtggagaa gattttagca aaggctactg tgttcttagg caaggggagg atatgacctt
      481 gcttgcgagt ggtattatgg tagagcaggc attaaaggcg gcggatcagt tagaggctca
      541 aggagtatct gttcaagtca ttgatctttt tcgtatcaaa ccaattcatg aagacatacc
      601 agctctatta tcaggaaggc cagtattaac tgtagaaaat cataatcgaa ttggtggact
      661 aggtagtagc atttgtgaat taatggctac agatttaacg accccagtac atcgaattgg
      721 tattgaggaa tcttttggtc aagttgggca acaagcttac ttaatggatg tatatggttt
      781 gacagcagag catattgtta aacaagcaca atcaatgtta caacaatagt gagatagtga
      841 ttcgtatttt atgtagcctt tcgatttact ttggcttgga aatagtagag caaatcaaaa
      901 gtaaaaaatc aagctcttag gaacttgatt ttttcttatt ctctacccat tcttctctta
      961 aaattccata tttgatagaa tcatgataat gcccttgcca gtatcgaacc ttgcggatat
     1021 gggcttcttt ggtcatgcct aatttttcag cggttctcat catgcccttg ttgccagacc
     1081 aggtagtgag cccgatgtgt tctaattctg taaattgctg gaaaatggta tcaatccaga
     1141 gttggagagc agctgtgcca tatccttttc cccagacctt atcgtcatag atttcaatcc
     1201 cgatttcgag ccagcgtgtt ggctggcact cccagtaata gctcacaaat ccaataggca
     1261 gctgatccac taggattgct ctgacacaat ctttttgtaa ccactggtag agttcaagtg
     1321 cttgaaaatc ttcaaaagtg gcgcaggcct ggtagtcatc aaaataggga gcagcaaatt
     1381 ccttccagcg aggtgcagct tcacgatggc caatcttcca aagtgtatgc aaataatctt
     1441 cagtcatcgg tgcaatcgta atcatgagaa cctcctttat ttttctagtc tagcatattt
     1501 gatgaaggct tgcaattcct gtcagaatat gggacactag aatcatgaaa aagatacagc
     1561 gtgaatttca aaaaatatat tacaacttag acaagattct tttgctcttt tttaccctgt
     1621 ttacctttat ggaatttgtt tggataccgc tcaattcatg gatttctgag ggactcttag
     1681 ctatgacagg gcatgcctac ctttcaccga cgaatttgtt ggcggtgttt gctgaaaatc
     1741 cgctcgtgac aggcttgttt attctcctct tttttgtcaa cattgccatt gcctatctag
     1801 aattagctct attgttcaca ggggtttggc aactgttgga tgaaaaagtc aagcacctcc
     1861 ccgactattt acgggatgta cgagatagta tggtggcgat tatccgtcac agcagcctac
     1921 caaaggtttt atttctgctc ttttactcag ttattcttct cccgtcttta cgacgggtat
     1981 taaatatcta ttattttaat aaaatcgtag taccccaatt tatcgtagat tacctatcca
     2041 acacagtttg gctaggaata ttgattttgt tcgttctcct cttgttcttc tggctcgcat
     2101 cacgctttat gtacgctctg ccgaacattt actttgaaca caggagtgtg aaggagtcca
     2161 tcgcttattc ttggaaaaag accaagggaa gaaaacaagt cagttccttt ttccgtctga
     2221 tttggctggt cacttttcca gtcctcctat tcacaggaat agggatattg ctctatctag
     2281 tacaactagt ggctgaacct tatctaccag acacaggtcc ttcatattgg ctggcagttg
     2341 tttgttatgc aatcctaaaa ttagcctact acggagtagt tgcactcttt atgatgggat
     2401 ttgtaagtct cttaacaggg aaacaattgc caaactaccg ccgtaaacgc ctccgtcatc
     2461 gcctgcgatt ggcaattttg ctagtatcca gtctggtatt cggtacacaa ggagcgcttg
     2521 cactctacta tcccttcgat accctgccag ttaccatttc ccatcgcggt gttgacaatg
     2581 gcaatgctgt ccagaactct atcgaggccc tagagaaaac ctctcaactc aagccagatt
     2641 atattgagat ggatgttcag gagacgaagg atggtcagtt tattgtcatg catgatacgg
     2701 atttattggc tttgacgggc aatcccggag gtacacatga ctatactctt gcagagttga
     2761 cagggatgac tgcatcagaa aacggcatgg tagctccagt tccttctttt gatgaatatc
     2821 ttgaaaaagc ggatgagctg ggacagaaat tattggtaga aattaaagtg accaaggcag
     2881 attcgccaaa actcacccag aatttcttaa aaaaatacgg tcaacgtttg attgccaaag
     2941 gacaccagat gcaatcatta gattaccgta ctattatcga aataaagcag tatagcgaga
     3001 aattagtatc cttctttatt cttccgttca attcaattta tccgacgacg gttgctgatg
     3061 gttatacaat ggaatacact tcgctggatc aaaattttat gaccaagtct tggattcgag
     3121 ggaagtcggt ttatgcttgg acaccgaatg aagaagagag tatgaccaag atgttgctgc
     3181 tacaagtgga cggtatcatc actgacaaca tgaccgacct ccaaagtctg atggaggaaa
     3241 tgaaagagaa tcgacgctat ccagacctct ttttccagca atttcagtct ttgatttata
     3301 attttgaata aaaaaatcgc gagaggagag tatccaatcg cgttttct
//
LOCUS       DASFQD010000164         3314 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.167, whole genome shotgun sequence.
ACCESSION   DASFQD010000164 DASFQD010000000
VERSION     DASFQD010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3314
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.167"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            265..948
                     /gene="tsaB"
                     /locus_tag="U1021_002118"
     CDS             265..948
                     /gene="tsaB"
                     /locus_tag="U1021_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEM4712606.1"
                     /translation="MKILALDSSNQALSVALVEDGRLQAETLLAVKKNHSISLMPVVD
                     FLVAQVGWTPKDLNRIVVAQGPGSYTGLRVAVATAKTLAYTLKIDLVGLSSLQSLVPP
                     SLTGLVVPLIDARRNCVYAGVYENGRAVEPDRYWSFEDLLSSLSGKENITFVGEVANF
                     IEQIEQALPSAQYQASLPSAYQLAVLGQDLPAVDVTSFEPNYLKRVEAEENWLKDNQA
                     GSESYIKRV"
     gene            945..1385
                     /gene="rimI"
                     /locus_tag="U1021_002119"
     CDS             945..1385
                     /gene="rimI"
                     /locus_tag="U1021_002119"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEM4712607.1"
                     /translation="MIEIKHYDGQENLAEAVLAVMESVYEQSPWTLEQIVTSLASQDE
                     DYYLAYEGQELVGFLAVQTVLDEMEILQIAVKADFQRMGIASQLMAAVMDWDGDIFLE
                     VRESNSAAQALYTRQHFTKIGKRKEYYRHPVEDAVLMKRERDER"
     gene            1375..2382
                     /gene="tsaD"
                     /locus_tag="U1021_002120"
     CDS             1375..2382
                     /gene="tsaD"
                     /locus_tag="U1021_002120"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEM4712608.1"
                     /translation="MKDRLILAIETSCDETSVAVLRNDAELLSNVIASQIASHQRFGG
                     VVPEVASRHHVEVITACIEEALLEAEVTAEDLTAVAVTYGPGLVGALLVGISAAKAFA
                     WANGLPLIPVNHMAGHLMAARAVKELEFPLLALLVSGGHTELVYVSEAGDYKIVGETR
                     DDAVGEAYDKVGRVMGLPYPAGRVIDELAHEGQDIYDFPRAMIKEDNLEFSFSGLKSA
                     FINLYHNAQQKGETLSNADLSASFQACVMDILMAKTKKALEQYPVKTLVVAGGVAANQ
                     GLRERLAAEITDVEVIIPPLRLCGDSAGMIALAAVSEYNKENLAGWDLNAKPSLAFEN
                     L"
     gene            complement(2419..3255)
                     /locus_tag="U1021_002121"
     CDS             complement(2419..3255)
                     /locus_tag="U1021_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM4712609.1"
                     /translation="MKIQPEFYVFNNRSYVDFYPIQFGMEACKPLHSFGPTMKQHYLF
                     HYIISGSGTFYDTSDQREYHLTAGQGFLISPDAICSYEADEKDPWTYIWLEFDGLKTE
                     HFLRQAGLSKEQPIFSQREMPTSSPVYHEMKQILALHHQKSALVLGHLYLFISCLIDC
                     SLTKTSSKHDENKEFYIREAINFVERNYEKAISVDDLAQVCNLNRHYFSRLFKEQMNI
                     SPQQFIIQYRLSEACELLKNTTKTLQEIAEEIGYSNQFNFSTAFKRHYQISPNRWRKI
                     HK"
BASE COUNT          830 a          662 c          920 g          902 t
ORIGIN      
        1 tctatccgat aactaacttg aaatcacaac cgattctttt cattatttga aaaaaacttc
       61 aagatagctt acaatagaaa gtagcattga aaagtctttc agtttacttt tagtactaga
      121 taacgagctg cgggctgtac tggagtacgg caaagcgaat tcaaataatg atgaaattat
      181 ttgaagtggg aaatacggaa acgaagtttc ctcatacatc gcagtaataa aagcaaaccg
      241 aatgacgtac agaaagagaa atttatgaaa atactagctt tagacagctc caatcaggct
      301 ttatcagttg ccttggtgga ggacggtcgt ttgcaggcgg aaaccctgct ggccgttaag
      361 aaaaatcata gtatcagcct catgcctgtg gtcgattttt tggtagcaca ggtgggatgg
      421 acgcccaaag acctgaatcg gattgtggtc gctcagggac ctggctccta cacgggtctg
      481 cgtgtggcgg tggcgaccgc caagaccttg gcctacaccc tcaagattga cttggtgggg
      541 ctatccagtc ttcagtctct ggttcctccc agcctgacgg gtctggtggt gcctctcatt
      601 gatgcccgcc gtaactgcgt ctatgcaggt gtttatgaaa atggcagagc agtcgagcca
      661 gaccgctact ggtcttttga agacttgctt tctagcctgt ctggtaagga aaatataacc
      721 tttgtcggag aagtagcaaa ctttatcgag caaatcgagc aagctctgcc gagcgctcag
      781 tatcaagcca gtctgccgtc tgcctatcag ttggcggtgc ttggtcaaga cttgccagca
      841 gtagatgtca ctagctttga gcccaactat ctcaagcggg tagaggcaga ggaaaactgg
      901 ctcaaggaca accaagctgg ctcagagagt tatatcaagc gtgtatgata gagattaagc
      961 actacgacgg tcaggaaaat ctagcggaag ctgtgttggc agtcatggag tcggtctatg
     1021 agcaatcgcc ttggaccttg gaacagattg tgactagtct agccagtcag gatgaggatt
     1081 attatctggc ctatgagggt caggaattag ttggattttt ggctgttcag acggtgctgg
     1141 atgagatgga aatcttgcag attgctgtca aggctgattt tcagaggatg ggaatcgcca
     1201 gtcaactgat ggctgctgtg atggactggg atggagacat cttcctcgaa gtgagggagt
     1261 ccaatagtgc agctcaggcc ctctatacac gccagcattt taccaaaata ggaaaacgaa
     1321 aagagtacta ccgccatcct gtcgaggacg cggtgctaat gaagagagaa cgtgatgaaa
     1381 gatagattga ttttggcgat cgagacctcc tgtgacgaga cctcggtggc tgttttgcga
     1441 aatgacgcgg agcttttatc caacgtcatt gccagccaga ttgccagcca ccagcggttt
     1501 ggtggggtgg tgcccgaggt ggccagccgt caccatgtgg aagtgataac ggcctgtatc
     1561 gaggaggcct tgttggaggc ggaagtgacg gcagaggacc tgacggctgt ggctgtgacc
     1621 tatgggcctg gcttagttgg tgccctgttg gtcgggattt cagctgctaa ggcctttgcc
     1681 tgggctaacg gtctgccgct cattcctgtc aaccacatgg cagggcattt gatggcggcg
     1741 cgtgcggtca aggagttgga gtttccgctc ttggccctct tggtcagcgg tggacacaca
     1801 gaattggtct atgtgtcaga ggcgggcgac tataagattg tcggtgaaac gcgagatgat
     1861 gcggtcggcg aagcctatga taaggtgggg cgggtcatgg gcctgcccta tccagctggt
     1921 cgggtgattg acgaattggc acatgagggg caagacattt atgacttccc tcgggctatg
     1981 attaaagagg ataatttgga gttttctttc tctggtttga aatccgcctt tatcaacctc
     2041 taccacaatg cccagcagaa aggggagacc ttgtccaatg cggacttgtc agcctctttc
     2101 caagcctgtg ttatggacat cctcatggct aagaccaaga aggccttgga gcaataccct
     2161 gtcaagacct tggtggtagc gggcggtgtg gcagctaatc agggcttgcg agagcggttg
     2221 gctgctgaaa ttaccgatgt ggaggttatc attcccccgc ttcgcctctg cggtgacagt
     2281 gcaggtatga ttgccttagc agcggtcagt gagtacaata aggaaaacct tgctggctgg
     2341 gacctcaatg ccaagcctag tctggctttt gagaatttat agaataaaaa cctcttacgt
     2401 caaggatacg taagaggttt atttgtggat ttttcgccag cgatttggag aaatttggta
     2461 atgtctttta aaagcagttg aaaaattgaa ttggttggag tagccgattt cttcagcaat
     2521 ttcctgtagt gtcttagtgg tgttttttaa gagttcgcag gcttcgctga gtcggtattg
     2581 gatgataaat tgttgaggtg agatgttcat ttgctccttg aataaccgac tgaagtagtg
     2641 gcgattgagg ttgcatactt gtgccaaatc atcgacggat atagctttct catagtttcg
     2701 ttctacgaag ttgatagctt ctcgtatata aaattccttg ttttcatcgt gtttgctact
     2761 tgttttggtt agcgaacagt caatgaggca ggagataaag aggtaaaggt gtccgagaac
     2821 tagagcgctt ttttgatgat ggagcgcgag aatttgtttc atttcatggt agacagggct
     2881 agaggtgggc atttctcgtt gtgaaaagat aggttgttct ttcgagagcc ctgcctgtct
     2941 gagaaaatgc tcagttttca gaccgtcaaa ttcaagccag atataggtcc aggggtcctt
     3001 ttcgtctgct tcgtagctac agatggcgtc tggggagata aggaagccct gtcctgcggt
     3061 taggtggtat tcacgttggt cggaggtatc gtaaaaagta cctgaaccag agatgatgta
     3121 gtgaaacagg tagtgttgtt tcatagttgg gccgaatgag tgaagtggct tacaggcttc
     3181 catgccaaat tggatggggt aaaaatctac ataggatctg ttattaaaga cgtaaaattc
     3241 aggttgtatt ttcatcgtat tctccatacc aaaagtgtaa aggcttacaa ttagtatagc
     3301 atatttatat gtaa
//
LOCUS       DASFQD010000165         3261 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.168, whole genome shotgun sequence.
ACCESSION   DASFQD010000165 DASFQD010000000
VERSION     DASFQD010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3261
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.168"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..347
                     /locus_tag="U1021_002122"
     CDS             <1..347
                     /locus_tag="U1021_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEM4712610.1"
                     /translation="SEIFRGGIEAIPKGQYEAAKVLKFTPVQTIRFIVLPQVVKIVLP
                     SVFNEVMTLVKDTSLVYALGVSDLLLASRTAANRDASLAPMFIAGAIYLLMIGAVTLI
                     SKQVEKKFDYYR"
     gene            357..989
                     /locus_tag="U1021_002123"
     CDS             357..989
                     /locus_tag="U1021_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM4712611.1"
                     /translation="MLELRNLSKRFDNKQIFSNYDLVIPEGKIIAIVGQSGGGKTTLL
                     RMLAGLETIDSGTLIYNGQELPLEELGKRHLLGFVFQDFQLFPHLSVLENLVLPPVKT
                     QNMSRSEAEDKALKLLDTLGLANHATAYPFSLSGGQKQRVALARAMMIDPEIIGYDEP
                     TSALDPELRKEVEKLILENRATGITQIVVTHDMQFAENIADEIIKIEPKH"
     gene            1003..1845
                     /locus_tag="U1021_002124"
     CDS             1003..1845
                     /locus_tag="U1021_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM4712612.1"
                     /translation="MMMNMKKMMLGAAALVTSFALVACGSSQSTTKSDNWSTYESEKS
                     ITIGFDKTFVPMGFEEADGTYTGFDIDLATAVFDKYGIAIEWQPIDWDLKETELNNGN
                     IDLIWNGYSVTDERKEKVLFTDSYMDNQQVLVTKKSSNISQVSDMKDKILGAQAGSSG
                     YSVFESQPAILKDIVQNNDASQYATFNEALIDLKNDRIDGLLIDRVYANYYLQQEGII
                     ADYNIIDAGFENESFAVGARKSDTTLVENINKAFTELYNEGKFQEISQKWFGEDIATD
                     AVKN"
     gene            complement(1982..3172)
                     /locus_tag="U1021_002125"
     CDS             complement(1982..3172)
                     /locus_tag="U1021_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018167465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEM4712613.1"
                     /translation="MKQQIQNLKLAERGAIVSITAYIALSGIKLAAGSMFHSDALTAD
                     AFNNISDIIGNIAVLVGLRMAQKPADTDHKFGHWKMEDLASLITSFIMFVVGFQVLYS
                     TLIKIMSNQTVEIDLTGAIVGIFSALVMVGVYLYNKSLAKKVHSKALEATAKDNLSDA
                     VTSIGTSIAIIAAALNFPIVDKIAAVIITFFILKTAYEIFMESFFTLSDGFDEELLHK
                     YEEDILKLPKIVAVKSQRGRTYGSNIYLDIVLEMNPDLSVYESHEITEQVEQLLTLKH
                     GVFDVDIHVEPTEIPHDELFEHVFDKLYRLESEIQAHEVGYEELIDDNYLLIDAKGRY
                     LNKADMLKAHPVQSTYLSNYQMTSVSQKSKLVTFEIGDYVHTSLWRRHENWTVVFHQI
                     SKKA"
BASE COUNT          984 a          592 c          703 g          982 t
ORIGIN      
        1 tctctgaaat tttccgtggt ggtattgaag ctattccaaa aggtcagtat gaagctgcta
       61 aggtattgaa atttacaccc gttcagacca ttcgttttat cgtcttgcca caggtggtga
      121 aaattgtctt gccaagtgta ttcaatgaag taatgacctt ggtcaaggat acatctttgg
      181 tatatgcctt aggtgttagc gacctcttgc ttgctagccg aactgcggcc aaccgtgatg
      241 ccagtctggc acctatgttt attgcaggag caatctatct gttgatgatt ggagctgtta
      301 cacttatttc taaacaagta gaaaagaaat ttgactatta tagataggag gaagtcatgt
      361 tagaactacg caatctatcc aaacgatttg ataataaaca gattttctcc aactatgatt
      421 tggtcattcc agaggggaaa ataattgcca tcgtcggtca atcaggtggt ggtaagacta
      481 ctcttttacg gatgttggca ggtttggaaa ccattgattc aggaaccttg atttataatg
      541 gtcaagaact gccacttgag gaattgggga aacgacatct gctgggcttt gtcttccagg
      601 acttccagct tttcccacac ctatccgttt tggaaaactt ggttctccct cctgtgaaaa
      661 cgcagaatat gtcgcgttca gaggcggaag acaaggccct taaactcttg gatactcttg
      721 gcctggctaa ccacgctact gcctatccgt tttcactatc gggtggacaa aagcaacgtg
      781 tggctttggc gcgtgctatg atgattgatc ctgagattat cggctatgat gaaccaactt
      841 cggccttaga ccctgaattg agaaaagaag ttgaaaaact cattcttgaa aatagggcta
      901 ctggaatcac gcaaattgtg gttacccacg atatgcaatt tgccgaaaat atagcagatg
      961 aaatcatcaa gattgaaccg aaacattaag aaaaggaata aaatgatgat gaatatgaaa
     1021 aaaatgatgc ttggagctgc ggctcttgta accagttttg ctcttgttgc ttgtggctct
     1081 agccagtcaa caactaagtc tgacaattgg tcaacttatg aatctgagaa gtctattact
     1141 attggttttg ataagacctt tgtcccaatg ggctttgaag aggctgatgg tacatatact
     1201 ggttttgata ttgatttggc aacagcagtt tttgacaaat atggtattgc gattgaatgg
     1261 caacctattg actgggattt gaaagaaact gaattaaaca atggcaatat tgatttgatt
     1321 tggaatggct attctgtaac tgatgagcgc aaggagaaag tactctttac ggattcgtat
     1381 atggataacc aacaagtact tgtgacgaaa aaatcttcga atatcagtca agtttctgat
     1441 atgaaggaca aaattttggg tgcgcaagca ggttcttctg gttactcagt ctttgaatct
     1501 caacctgcaa tcttgaaaga catcgttcag aataatgatg caagtcagta tgcgacattt
     1561 aacgaagcct tgattgactt gaaaaatgat cgtatcgatg ggctcttgat tgaccgtgtt
     1621 tatgcaaact attacttgca acaagaggga attattgcag actacaatat tatcgatgcc
     1681 ggttttgaaa atgaatcttt tgcagtaggt gctcgtaagt cagatacgac acttgttgag
     1741 aatatcaaca aagcttttac cgaactttac aatgaaggga aattccaaga aatttcacaa
     1801 aaatggtttg gtgaagatat tgctacagac gcagtgaaaa actaatactc ttcgaaaatc
     1861 aaaaatatcc attgtcaaga gccttgatga acttcagttc tatcgtcggc ttcgtttcct
     1921 aggctatttt tgattttcat tgagtataaa taattataaa cgaaaagcct tgtcgcaatg
     1981 actaggcttt tttggatatt tgatgaaata caactgtcca gttttcatgc cgtcgccaga
     2041 gggatgtgtg gacgtagtcg ccaatttcga aggtgactag tttggatttc tgactgacag
     2101 aggtcatttg gtagttggag aggtaggtgg attgtacagg gtgagctttt aacatatcag
     2161 ccttgttgag gtaacgacct ttggcatcaa tcaagagata gttatcatca attaactctt
     2221 cataaccgac ttcgtgagct tgaatttctg attccaagcg ataaagttta tcgaagacat
     2281 gttcaaacag ttcgtcatgc ggaatttcgg tgggttcgac atgaatatca acatcaaaaa
     2341 caccatgttt taaggtgaga agttgctcta cctgttctgt aatttcgtgg ctctcataga
     2401 ccgatagatc aggattcatt tccaggacaa tatccagata aatatttgag ccataggttc
     2461 tgccacgttg ggatttgacg gcaacaattt tggggagttt gagaatatct tcttcatatt
     2521 tatgtaggag ctcctcgtca aaaccatctg aaagcgtaaa gaaactttcc atgaaaatct
     2581 catatgcagt ttttaagatg aagaaggtaa taatcaccgc agcgatttta tcgacaatag
     2641 gaaagttgag tgctgctgca ataatagcta tagaagtacc gatagaagtc acggcgtcgg
     2701 agaggttatc ttttgcggtt gcttctaagg cttttgaatg aaccttctta gcgagtgatt
     2761 tgttgtaaag ataaacacct accattacaa gtgctgagaa aataccaact attgctccgg
     2821 tcaaatcaat ctctacagtt tggttgctca tgattttgat aagggtggag taaaggactt
     2881 ggaaaccaac cacaaacata ataaaggaag taatcagact agccaaatct tccattttcc
     2941 agtgtccaaa cttatgatca gtatccgctg gtttctgagc cattcgtaga ccgactagga
     3001 cggcgatatt gccaataata tccgaaatat tattaaaggc atcggcagtc agtgcatcag
     3061 aatggaacat actcccagca gctagcttga tacctgagag agcaatatag gctgtgatag
     3121 agacaatcgc accacgctcg gcaagtttta agttctgaat ttgttgtttc atagctcctc
     3181 ctaaacatat tcatttattc taacaaaaag tctacctgct ttcaagaaac tcagatagac
     3241 tttttagttt gaagatagcg a
//
LOCUS       DASFQD010000166         3075 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.169, whole genome shotgun sequence.
ACCESSION   DASFQD010000166 DASFQD010000000
VERSION     DASFQD010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3075)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3075)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3075
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.169"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            126..1346
                     /locus_tag="U1021_002126"
     CDS             126..1346
                     /locus_tag="U1021_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEM4712614.1"
                     /translation="MLENWLNTKQGQVFHYKMEKIEYALELLGNPQFAVPVIHVAGTN
                     GKGSTIAFMRQLFQVHGLRVGSFVSPHMVSVHDRICIDSQPISDHDFQCYLQKVYDLE
                     QEVATRYEPFRYFEVMVLIMFLYFEAQQPDVALVEVGIGGLLDTTNVVAPALSVITSI
                     GMDHQDLLGSTLGEIAEQKAGIIKESVPVVLGPLSPETTAICRHIAQDKQASVYQFGQ
                     EFTYKAGQFSNADLELSELVLGLAGQHQEENAAVALQTFLLYMARIQKTVSPQLIKNA
                     LAQTNWPGRLELVAQEPKIYLDGAHNVPAIERLVEFIQVQEEPVTILFSALRRKDFQE
                     MLELLEEKLPHTALVLTSFAYDGALSEENRQGRDYVENYQQFIEDWQSSEQGILIVTG
                     SLYFISEVRRIFKK"
     gene            1537..3060
                     /locus_tag="U1021_002127"
     CDS             1537..3060
                     /locus_tag="U1021_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol oxidase"
                     /protein_id="HEM4712615.1"
                     /translation="MTELDVVSDVVPHPEETYRRSRRASRRQQVQLNGEFHERVLKTK
                     YWPALVWSLVLSVFSVANPLLMPFATNIQTQNLYAGMAMANGQIPYGDFFGTSGLLFY
                     LLAFLGHRGGTFIIFGILQFIVLLIAGIYFYKIVAYFSQSEHLATSSSHWFYVFIFAL
                     GFGGMYAEMFALPFLLTSVWFLVRYFENAVRDEAFILYGIDAALVFLIYPKSLILWLV
                     AGLVLFIFNIQHRQVTRGIYQLLATIFGFLLILYAVGYYAFEAQILGTAIQQTFLYNL
                     QLDFHHSYLYLDLAIVSVFLLLSGFFKSFIQMLFSFKQGRHTYIKVLLLLTFLVQCVF
                     IIGNANFQWSQLILLLPYGFAMSVVYLRDEDVEDYRGYLRRQFFLPLAICLGIIAQPA
                     YLYLVQGDLRTDREQVANYIGEQTKDSDKIYVWDNSASIYLSSQRLSAATITTAEPYL
                     NTDDNKNSLMYDINKNEAKFVVVNKTLPILDEIKTNLESQYQSVQTTDYFTIYQKNE"
BASE COUNT          869 a          590 c          643 g          973 t
ORIGIN      
        1 ttacaaaagt ttttccattt ggagatttct cgacaagctg gtggaatttt taacattcac
       61 cttattcaaa aagccaacat ccgtatggct tttttgttat actagacagt atgtaggagg
      121 tggctatgtt agaaaattgg ttaaacacca agcaaggtca agtgtttcat tataagatgg
      181 aaaagattga gtatgcctta gaactgctag gaaatcccca gtttgcagtg ccagtcattc
      241 acgtagctgg aaccaacggc aaggggtcga ccattgcctt tatgcgccag ctctttcagg
      301 tacatggctt gcgtgtcggc agttttgtat ccccccacat ggtgagcgtg cacgacagga
      361 tttgtattga cagccagccc atttcagacc atgattttca gtgctattta cagaaagtct
      421 acgatttgga gcaggaagtt gccactcgtt atgagccttt tcgctatttt gaggtcatgg
      481 tgctcattat gttcctctat ttcgaagctc aacaacccga tgtggcacta gtagaggtgg
      541 gcatcggagg acttttggat acaaccaacg tcgtggcacc ggctctcagc gtcatcacat
      601 ccatcggcat ggaccatcag gatttactag gatcgacttt aggggaaata gcagagcaga
      661 aagcagggat tatcaaggaa agcgtgcctg tcgtcttagg accactttct ccagaaacca
      721 cagctatctg tcgccacatt gcccaagaca aacaagcctc tgtctaccaa tttggtcagg
      781 agtttaccta taaagcagga cagttcagca atgcggactt ggaactgtca gaattggttc
      841 taggcttggc tggtcagcac caagaagaga atgcggccgt tgccttgcaa acttttttgc
      901 tttatatggc aagaattcaa aaaactgttt ctcctcagtt aataaaaaat gcccttgccc
      961 aaaccaattg gccaggtcgt ttggaattgg ttgctcaaga gccaaaaatc tatttggatg
     1021 gagcccacaa tgtccccgct atcgaacgtt tggttgaatt tattcaggtt caagaagagc
     1081 ctgtcaccat tctcttttca gcccttcggc gcaaggattt tcaagaaatg cttgaattat
     1141 tggaagaaaa attaccacat actgcccttg tattaaccag ctttgcttat gatggtgcct
     1201 tgtctgagga aaaccgacaa ggacgagatt atgttgagaa ctatcagcag tttatagaag
     1261 actggcaatc tagcgagcaa ggtattttga ttgtcacagg ctctctctac tttatctcag
     1321 aagttcgtcg gatttttaaa aaatgaatat ctttttgcga ataaataggt atgacacatg
     1381 cagaaacagt agccttttta aaggaatttg aaaaaaccaa acgccatacc ttccgtcaat
     1441 tagagcagtt tgcaaaaatt tccagaactc ccgataggaa atgacatcgg gagtgctttt
     1501 tgatataata aggaaagcaa atccaaggag aagaaaatga cagaattaga tgtagtttcg
     1561 gacgtagttc ctcatcctga ggaaacttat cggcgtagtc gtagagcatc acgcagacag
     1621 caagtgcaac tgaatggtga atttcatgaa agagtattaa agacaaagta ttggccagct
     1681 cttgtttgga gcttagtttt aagtgttttt agcgtagcta atccactgct aatgccattt
     1741 gcaaccaata tacaaactca aaatttatat gcagggatgg caatggcaaa tggacaaatc
     1801 ccttatggtg atttctttgg tacaagcggg ttattattct acttacttgc tttcttaggt
     1861 catcggggag ggactttcat tatctttgga atcctccagt ttatagtgtt actgatagcg
     1921 ggaatctatt tctataagat tgtagcttat tttagtcagt cagaacacct agcgacaagt
     1981 tctagtcatt ggttctatgt atttattttt gcacttggtt ttggagggat gtatgcagaa
     2041 atgtttgctc ttccgtttct tttgactagt gtgtggtttc tggtccgcta ttttgaaaat
     2101 gcagtgcgtg atgaggcatt tatcctctac ggaatcgatg cggcattggt atttttaatt
     2161 tacccaaaaa gtctgatcct ttggttagtt gcgggtctag ttttatttat ttttaatatc
     2221 caacaccgcc aagttactcg aggaatctat caattattag cgaccatttt tggttttctt
     2281 ctgattctat atgcggtagg ttattatgct tttgaggcgc agattctggg gacagctatt
     2341 caacaaactt tcctttataa cttacagtta gactttcacc attcctatct atatttagac
     2401 ttggcgattg tgtctgtatt tttactccta tctggattct ttaaaagttt catccaaatg
     2461 ctgttttctt tcaaacaagg aagacatacc tatatcaaag ttctcctatt attgactttc
     2521 ttagttcaat gtgtctttat tattgggaat gcaaactttc aatggagcca actcattctt
     2581 cttttaccgt atggttttgc gatgtcagtc gtttacctgc gtgatgagga tgtagaagat
     2641 tatcgtgggt atttgcgtcg tcaattcttt cttccgttag ctatttgctt gggtattatc
     2701 gctcaacctg cttatcttta tttggtacag ggagatttga gaactgaccg tgaacaagtt
     2761 gccaattaca ttggtgaaca aacaaaagat tcggataaga tttatgtttg ggataatagc
     2821 gcaagtatct atctttcaag tcaacgttta tctgccgcaa cgattactac agcagaaccc
     2881 tatctgaata ctgacgacaa taaaaatagc ttgatgtatg acatcaataa aaatgaggca
     2941 aaatttgtag tcgtcaataa gactttacca attctagatg aaatcaagac aaatttagaa
     3001 tcacaatacc agtctgttca gacaacggat tactttacga tttatcaaaa gaatgaatga
     3061 ttgctcaggc agtca
//
LOCUS       DASFQD010000167         3008 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.170, whole genome shotgun sequence.
ACCESSION   DASFQD010000167 DASFQD010000000
VERSION     DASFQD010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 3008)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3008)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3008
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.170"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            134..1441
                     /gene="xylA"
                     /locus_tag="U1021_002128"
     CDS             134..1441
                     /gene="xylA"
                     /locus_tag="U1021_002128"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010768166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HEM4712616.1"
                     /translation="MSYFPHLSPIKYEGTATTNPFAFRHYNPDEVIEGKTMKEHLRFA
                     LAYWHTMTQDGSDPFGYPTNERTWFGETVMETAHNRVDAFFEILEKLGVDYFCFHDID
                     IAPAGDSLEEFFSNLDEITDHIKAKMEETGKKLLWNTANMFSHPRFNNGAASSNNAEV
                     FAYAAAQVKKGLDISKKLGGENYVFWGGREGYESLINTDMKFEQENIARLFKMAIAYG
                     EKIGHKPQFLIEPKPKEPSKHQYDFDAATTMAFILKHGLEGDFKLNLEANHATLAGHT
                     FEHELNVARDFNALGSIDANQGDMLLGWDTDEFPTNIYDTTFTMLEILANGGLAPGGI
                     NFDAKVRRSSFEMEDLLLAHIAGMDTYARGLKAAAKIRSDRFLENLKEKRYASYKEGI
                     GASILADKEDLESLTAYALEHDNPKLESSHLELVKSQLNDYLV"
     gene            1491..2966
                     /gene="xylB"
                     /locus_tag="U1021_002129"
     CDS             1491..2966
                     /gene="xylB"
                     /locus_tag="U1021_002129"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HEM4712617.1"
                     /translation="MSYVLGIDLGTSSLKGLLVTKQGELVASASAEYDLMHLQPGFSE
                     QNPKDWLLACDKVFEALTDKVADFTSQLEGISFSGQMHSLVLLDGRGHVLRPAILWND
                     TRTSAQCRQIEEKLGNRLLAITRNRALEGFTLPKILWVQEKEPEIWAQVRQLMLPKDY
                     LGYYLTGNHHTDFTDAAGTLLLDIENGEWSAEIADTFGIPISYLPKVVASSVQIGTVR
                     KELQERYGLENAVQVFAGGADNACAAVGAGILSSQVGMASIGTSGVFLSYEGNKTLDY
                     QGKLHFFNHALSGSYYSMGVTLAAGHSLNWFRDTFAKEQSFSDLLATISSISPGSNGL
                     LFTPYIVGERTPHVDSHIRGSFIGIDTSHRLAHFTRSVLEGITFSLKDAQSLMTEVAG
                     KTFTRIVSVGGGAKNKDWLQIQADVFNAEIVTLKAEQGPGLGAAMLAALGLGWFENME
                     SCADHFVAYTDAIQPIPENVAVYETIYQHYKAIYPNVKNIK"
BASE COUNT          889 a          563 c          680 g          876 t
ORIGIN      
        1 aaaggggaat aagccaaaaa taataaaaaa aatttaaaag cgcttgacaa agaagtgttg
       61 atatgttatt ctctctgtgt aagttagttt aacaaaaaaa ctaacaaaag tcaatacata
      121 taaggagaat attatgtcat atttcccaca tttatcacca attaaatatg aaggtacagc
      181 aacaacaaat ccttttgctt ttcgccatta caatcctgac gaggtgattg aaggtaaaac
      241 aatgaaagag catttgcggt ttgctcttgc ttattggcat accatgacac aagatggttc
      301 agatccattt ggttatccaa caaacgagcg cacatggttt ggggaaactg ttatggagac
      361 agctcacaat cgagtggatg cgttttttga aattcttgaa aaacttggag tggattattt
      421 ctgtttccat gatattgata ttgctccggc gggggattct ttagaagaat tcttttctaa
      481 ccttgatgaa attacagacc atattaaagc aaaaatggaa gagacgggga aaaaacttct
      541 ttggaataca gcaaatatgt tttctcaccc tcgtttcaac aatggtgcag cctcctcaaa
      601 taatgcagaa gtctttgcct atgcagctgc tcaagttaag aaggggttgg acatttctaa
      661 aaaacttggt ggcgaaaact atgtcttctg gggcggacgt gaagggtacg aatctttgat
      721 caatactgac atgaagtttg agcaagaaaa cattgcccga ctcttcaaaa tggcgattgc
      781 ctacggtgaa aagattggtc ataagccaca gttcttgatt gagccaaaac caaaagaacc
      841 gtcaaaacat cagtatgatt ttgatgcggc gactaccatg gccttcattc tcaaacacgg
      901 tcttgaagga gatttcaagt tgaacctaga agctaaccac gcgacccttg cagggcacac
      961 ctttgaacat gagctaaatg tggcgcgtga ctttaatgct cttgggtcga ttgacgccaa
     1021 ccaaggcgat atgcttctgg gctgggatac ggatgagttc ccgacaaaca tctacgacac
     1081 cacctttacc atgcttgaaa ttttggcaaa tggaggtcta gcaccaggtg gcatcaactt
     1141 tgatgctaag gtccgtcgtt catcctttga aatggaagac cttcttttag ctcatattgc
     1201 tggtatggat acctatgcgc gaggtttgaa agcggcagcc aaaattcgct ctgatcgttt
     1261 cttagagaac ttgaaagaaa aacgctatgc gagctataaa gaaggcattg gtgccagcat
     1321 tcttgcagat aaggaagact tagaaagtct cactgcatat gccttggaac acgacaatcc
     1381 aaaattagaa tccagccatt tagagttagt caaatcgcaa ttaaatgatt atttagtata
     1441 aggggggtgt gggggataga tgccttccca cttgtagaaa gtaggttcgt atgtcttatg
     1501 ttttaggtat tgatcttgga accagttctt taaaggggct tttggttacc aaacaaggag
     1561 agcttgtggc gtctgcctct gctgagtatg atttgatgca tttgcaacca ggatttagtg
     1621 agcagaatcc taaagattgg cttctagctt gtgataaggt ctttgaggcg ttgacagata
     1681 aggtagcaga ttttacctct caattagaag gtattagctt ttctggccaa atgcatagtc
     1741 tagtcctttt agatggacgt ggccatgttt tacgaccggc tatcttgtgg aatgatacac
     1801 gaacaagtgc ccagtgtcgt caaattgaag aaaaacttgg taatcgctta ttggctatta
     1861 ctcgaaatag ggcgcttgaa ggtttcaccc taccaaaaat tctttgggta caggaaaagg
     1921 aacccgaaat ttgggctcag gtgcgtcagt tgatgctacc aaaagattat ttgggctact
     1981 atttgacagg taaccatcat actgatttta ctgatgccgc aggtactctc ttgcttgata
     2041 tcgaaaatgg agaatggtct gctgaaattg ccgatacgtt tggtattcct atcagttatt
     2101 taccaaaagt tgtcgcttct tccgttcaaa ttggcaccgt tagaaaggaa cttcaagaac
     2161 gttatggttt agaaaatgcc gtccaggtct ttgcgggtgg tgctgacaat gcttgtgcag
     2221 cggtgggagc aggaatttta tctagtcaag tcggtatggc aagtattggg acatcaggtg
     2281 ttttcctctc ttatgaagga aataagacac ttgattatca aggaaaactc cactttttta
     2341 accatgcttt gagtggtagt tactattcca tgggtgtgac gttggctgct ggtcatagtc
     2401 tcaactggtt ccgtgatacc tttgccaaag agcagagctt ttcggatttg ttagcaacta
     2461 tcagttccat ctctccaggg tctaacggcc ttctctttac accatatatt gttggagaga
     2521 ggacgcccca tgttgatagt catattcgtg gctcatttat cggtattgat accagccata
     2581 gattagcaca ttttacaagg agtgtacttg aaggcattac attttctttg aaagatgctc
     2641 aaagtcttat gacagaagtg gcaggaaaaa cttttacccg cattgtttct gtcggtggtg
     2701 gtgctaaaaa taaagattgg ctccagatac aggcagacgt ctttaatgca gaaattgtaa
     2761 ccttaaaagc tgaacaagga ccaggcttag gtgcggcgat gctagcagct cttggtttag
     2821 gatggtttga gaatatggaa tcctgcgcag accactttgt agcatacact gacgccattc
     2881 agccaattcc agaaaatgtc gctgtctacg aaaccatcta tcagcactat aaagccattt
     2941 acccaaatgt caaaaatatt aagtgagggt ttttatggaa aaatcgtata tgaataactg
     3001 tgagataa
//
LOCUS       DASFQD010000168         2982 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.171, whole genome shotgun sequence.
ACCESSION   DASFQD010000168 DASFQD010000000
VERSION     DASFQD010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2982)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2982)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2982
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.171"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            19..521
                     /locus_tag="U1021_002130"
                     /pseudo
     CDS             19..521
                     /locus_tag="U1021_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730376.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            514..981
                     /locus_tag="U1021_002131"
     CDS             514..981
                     /locus_tag="U1021_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase"
                     /protein_id="HEM4712618.1"
                     /translation="MARKEMVTLTNMCLIEDKEGKVVVQIRDPKRYRWSGVAFPGGHI
                     EEGENFHDSVVREVFEETGLTIANARLVGIKHWPDKEGYRYIVFLYKATEFTGTIRST
                     EEGEVRWVEKSDLSQMDLAYDLLEILKVMDEPDLSEFFYTRKNDDGEWDKNFR"
     gene            1180..1509
                     /locus_tag="U1021_002132"
     CDS             1180..1509
                     /locus_tag="U1021_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003087855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEM4712619.1"
                     /translation="MKKYIMTGLVLLATMTLSAYSGNTTQEDTSLKDVQEKGKLIVAL
                     NPEFPPFEFRTLVDGKDTIVGADIELAKAIGQELGVEVEFSAMSFDNVLNNVQSGQSD
                     ITFCDFN"
     gene            complement(1488..1748)
                     /locus_tag="U1021_002133"
                     /pseudo
     CDS             complement(1488..1748)
                     /locus_tag="U1021_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735813.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
     gene            1696..1989
                     /locus_tag="U1021_002134"
     CDS             1696..1989
                     /locus_tag="U1021_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018165336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEM4712620.1"
                     /translation="MEKSYTFARSSVAEIPEMVEAVIFEEPIAKAYVAKNDDLVILDT
                     EIKSSYSDAYAIALPKGSTALKEKVDSVITKLVESGQMDQFVQEAYELSISNN"
     gene            2161..2961
                     /locus_tag="U1021_002135"
     CDS             2161..2961
                     /locus_tag="U1021_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014735814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEM4712621.1"
                     /translation="MKKILALAATVLAGLTLAACSSTSSQSALDKIKEKGTLVVATSP
                     DYAPFEFQALVDGKNEVVGADIMLAQKIADELGVKLEVSAMSFDNVLSSVQNGKADIA
                     IAGLSYSEERAKVFDFSESYYQISDVLLIKKDSANSLTSIDAMSGKTLAVQKGSTQES
                     YAQENISQANIISLTLMGEAVNELKSGKVDAILMDSPVAAGYVSQNSDLAVASVEFPT
                     IDENSKVIALPKGSTELKTAIDKVIAEVKASGEFDTFLEKAATYTSVE"
BASE COUNT          982 a          449 c          675 g          876 t
ORIGIN      
        1 aattcggagg tcctttagat gatgattaaa ccactggaaa cgaaaagtga aatactaggc
       61 aaggcctatg ttcattggaa atcgtggcag gaggcctatg ctgacctgtt acctcaggaa
      121 tttttaaaga aaacttacac cttagaaagc tgtcaagact gggcagttcg gtatcctaag
      181 aatatcttga tagctgtgat ggatgataag gtggttggct ttgcctgtta ctgctcgtct
      241 agtcaggagg atttgcaagg ggcaggggag ctctacgccc tctatgtctt ggcggattat
      301 tatgatcaga agataggcta ccagctcatg caggcagctt tggaaaaatt gcagagctac
      361 gaaaccgtta ctctctgggt attggagggg aatgcgcgtg ctgttgcctt ctatgaaaaa
      421 gtgggcttcc gatttgatgg tgtcaaaaaa cggtcaattt aggcgcagaa cgtacagaat
      481 atagaatgat ttttaaacag aaagagagag aaaatggcta gaaaagaaat ggtcactttg
      541 accaacatgt gtctaatcga agataaggaa gggaaggtcg ttgtacagat tcgagatccc
      601 aagcgttatc gttggtctgg tgttgccttt ccaggtggac atattgaaga aggcgagaat
      661 ttccatgatt cggttgttcg tgaggtcttt gaggagactg gcttgacgat tgcaaatgca
      721 cgactagtcg gaataaagca ttggccggat aaggaagggt atcgttacat tgtatttctc
      781 tataaggcaa cagagtttac aggaactatc cgatcaactg aagaaggcga ggtgcgttgg
      841 gttgagaagt cggatctgtc tcagatggat ttggcctatg acttactaga aatcctgaaa
      901 gtcatggatg agccagattt gtccgagttc ttttatacta gaaaaaatga cgatggagag
      961 tgggacaaga attttaggta gaagctagga atagcttctt ttttatgtca tttgaataaa
     1021 atacaataaa taagttgaca aatgtataca aatgacataa aatgttttta tctttcaaaa
     1081 aaggagaaaa aatatgcatt ttgctacaat gaaagtccga tgttttatat aaaaaacggt
     1141 ataagtatgc acaggattat tttaaaggag aatatgatga tgaaaaaata tattatgaca
     1201 ggattggttt tgttggcaac gatgacccta agtgcttata gtggaaatac tactcaagaa
     1261 gatacttccc tgaaggatgt tcaggaaaag ggaaaactaa ttgttgcatt gaatccagaa
     1321 tttccaccat ttgagtttag aacactggtt gatggcaaag atacaatcgt tggagctgac
     1381 attgagcttg caaaagccat tggtcaagaa ttgggtgtag aagtcgaatt ttcagcgatg
     1441 agttttgata atgttttgaa caatgtccag tcagggcaat cggatattac cttctgtgat
     1501 tttaattgat taatcagctc tccgttcgaa gctagagcaa taaccgtgga agacggaagc
     1561 tgttctttaa taatttgttc ttgaatagaa cctttttgtg ctcctatatt tgcctcagct
     1621 agagaatcaa gcgatgtata ttgtgcaaga tcctctttat ttataataac tttattggtt
     1681 gaggtgtagt aaggaatgga aaaatcatac acttttgcac gctcttcagt ggctgaaatt
     1741 cctgaaatgg tagaagcagt tatttttgaa gagccgattg cgaaagccta tgttgccaaa
     1801 aatgatgact tggttatttt agatactgag ataaaaagta gctattcaga tgcctatgct
     1861 attgccttac caaaaggaag tacagcttta aaggaaaaag ttgactctgt cattacaaaa
     1921 ctagtggaat ctggacagat ggatcaattt gttcaagaag cctatgaatt atccatttcc
     1981 aataattaaa ttttatacga ttaaattgaa taaaaataat attttcttga caaatgtata
     2041 aaaatgaatt aaaatgagaa tacattctga aaaactgcaa gaaaatacaa tgaaaatcaa
     2101 taagcttctg ttttttagaa taagtatttt attaaaataa agagaaggta tttaggaaat
     2161 atgaaaaaaa tcttggcatt agcagcaaca gttttagcag gactgacatt ggcagcttgt
     2221 tcttcgacgt catcacaatc cgcattagat aaaattaaag aaaaaggtac attggtagtg
     2281 gcaactagtc cagactatgc tccattcgag tttcaggcac tagttgatgg aaagaatgaa
     2341 gttgttggtg cagatattat gttggctcaa aaaatagccg acgaacttgg ggttaagctt
     2401 gaagtttcag caatgagttt tgacaatgta ttgtctagcg ttcaaaatgg caaagctgat
     2461 attgcaattg ctggtctatc ttattcggaa gagcgtgcaa aagtttttga tttctctgaa
     2521 agttactatc aaatttctga tgtattactt atcaaaaaag atagcgccaa ttcactcact
     2581 tcaattgatg ctatgagcgg gaaaactctc gcggtacaaa agggttcaac acaggaatcc
     2641 tacgcacagg aaaacattag tcaagctaac ataatttctt taaccttgat gggtgaagct
     2701 gtaaatgagc tcaaatcagg aaaagttgat gctattttaa tggattctcc agttgctgct
     2761 ggttatgttt cacagaattc agatttagcc gttgcatccg ttgaatttcc aacgattgat
     2821 gagaattcga aagtcattgc tttgccaaaa ggtagtacag aactaaaaac tgcgatagac
     2881 aaggttatcg cagaagtaaa agcaagtggt gagtttgata ctttccttga gaaggctgca
     2941 acatatacaa gtgtcgaata agagaaacga gaggctgggt aa
//
LOCUS       DASFQD010000169         2964 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.172, whole genome shotgun sequence.
ACCESSION   DASFQD010000169 DASFQD010000000
VERSION     DASFQD010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2964)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2964)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2964
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.172"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..528
                     /locus_tag="U1021_002136"
     CDS             <1..528
                     /locus_tag="U1021_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000974722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEM4712622.1"
                     /translation="HHDKHHATYVANANAALEKHPEIGEDLVALLSDVEQIPADIRQA
                     LINNGGGHLNHALFWELLSPEKTGISAELAADIDATFGSFDAFKEAFTAAATTRFGSG
                     WAFLVVNKEGKLEVISTANQDTPIMQGLKPILALDVWEHAYYLNYRNVRPSYIKAFFE
                     VINWDKVNELYKAAK"
     gene            790..2814
                     /locus_tag="U1021_002137"
     CDS             790..2814
                     /locus_tag="U1021_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HEM4712623.1"
                     /translation="MKKNIRLKSSILALVAGFSVIATQAVLADELAVQIMGVNDFHGA
                     LDMTGTARLEGETVRNAGTAALLDAYMDDSQAEFEETAAETETPAESIRVQAGDMVGA
                     SPSNSGLLQDEPTVKVFNKMDVEYGTLGNHEFDEGLDEYNRIMTGEAPKKGQFNEIVD
                     NYTREAAKQEIVIANVIDKETGEIPYGWKPYAIKTIPVNDKEAKIGFIGVVTTEIPNL
                     VLKKNYEQYTFLNEAETIAKYARELAEKGVNAIVVLAHVPATSKDGVAAGEAADMIAK
                     LNEIYPEHSVDLVFAGHNHVYTNGTTGKTLIVQATSQGKAYADVRAVYDTDIADFKAV
                     PTAKIIAVAPGQKTPSPEIQAIVDEANTIVKKVTEQKIATASQATDISREVNEFKESA
                     VGNLVTSAQLAIAKKSGYDVDFAMTNDGGIRADLKVQEDGTVTWGAAQAVQPFGNILQ
                     VVQMTGEQIYTALNQQYDEGEKYFLQMSGIKYIYTKADNPTEENPYKVVKAFKEDGTE
                     IVPTETYTLVINDFLFGGGDGFSIFKEAKLIGAINPDTEVFVEYLTDLEKAGQTISAT
                     IPGRKAFVEKYVEEPKAEEKEDNAGTTTDAKTPEKANDGGDSVTNQKANEQPAPSGSM
                     APISNKKTEKASGNQTLPNTGQEALGSLLISLGGLVSLGMAVSVRRKEGE"
BASE COUNT          993 a          492 c          672 g          807 t
ORIGIN      
        1 caccacgata agcaccatgc gacttatgtt gcaaatgcta atgcagcact tgaaaaacat
       61 cctgaaattg gcgaagactt ggtagctctt ttgtcagatg tggagcaaat tccagctgac
      121 atccgccaag ctttgatcaa caacggtggt ggtcatttga accatgctct tttctgggaa
      181 ttgctttcac ctgaaaaaac aggaatttca gcagaattgg cagcagatat tgatgcaacc
      241 tttggttcat ttgatgcttt caaagaagcc ttcactgcag cagcaacaac tcgtttcggt
      301 tcaggttggg ctttcttggt tgttaataaa gaaggcaagt tggaagttat ctcaactgct
      361 aaccaagaca caccaatcat gcaaggtttg aaaccaatct tggcattgga cgtttgggaa
      421 catgcttact accttaacta ccgcaatgtc cgtccaagct acatcaaagc cttctttgaa
      481 gtaatcaact gggacaaggt taacgaactt tataaagcag ctaaataaga acagttctct
      541 tccgtttgga agagattttt aagttgtgag gagtattttg gagagaactg tgtaagggca
      601 gagggatgat ttttcgtatt atggataaaa acaacaagat attttcagaa aaatgatgta
      661 aaagtaagaa taaacgaata tttttataat tttttgttat aaatgactga tttaatattg
      721 aaaagctgta aaaaaaggat tattatagat atgtcaatat aaaaaaatag aaggagcatt
      781 gttttgctta tgaaaaagaa tattcggttg aaaagcagta tactagctct tgtagctggt
      841 tttagcgtta ttgcaacaca agctgttttg gcagatgaat tagctgtcca aattatggga
      901 gttaatgatt tccatggtgc gcttgatatg acggggacag cgcgattgga aggggaaaca
      961 gttcgtaatg caggaactgc tgctttactt gatgcttaca tggatgattc acaagcagaa
     1021 tttgaagaaa cagcagcaga aacagagaca cctgcagagt ctatccgtgt tcaagctggg
     1081 gatatggttg gtgcaagtcc atcgaattct ggacttttgc aagatgaacc aactgtaaaa
     1141 gtctttaata aaatggatgt tgaatacgga actttgggga accatgagtt tgatgaggga
     1201 cttgatgagt ataaccgtat catgactggt gaagctccaa aaaaaggtca gtttaatgag
     1261 attgtagata attatactcg tgaagctgct aaacaggaga ttgttattgc taacgttatt
     1321 gacaaagaaa cgggtgaaat tccgtatggt tggaagccct acgctattaa gactattccc
     1381 gtgaatgata aggaagctaa gattggcttt attggtgtag ttacgacaga aattcctaat
     1441 cttgttttga agaaaaacta tgagcagtac acttttttga atgaggcaga gacgattgct
     1501 aaatatgcgc gtgagttagc tgaaaaaggt gtaaatgcga tagttgtact ggctcacgtt
     1561 ccggctacaa gcaaggatgg tgtggctgct ggcgaagctg cagatatgat tgctaagcta
     1621 aatgaaatct atcctgaaca ctcagttgac cttgtatttg ctggccataa ccatgtctat
     1681 acaaacggta caacgggcaa aaccttgatt gttcaagcta cctcacaagg taaggcttac
     1741 gcagatgtta gggctgttta tgatacagat attgccgact ttaaagctgt tccgactgcg
     1801 aaaattattg cagtagcacc agggcagaaa acaccaagtc cggaaattca ggcaattgta
     1861 gatgaggcaa ataccattgt taaaaaagta actgagcaaa aaattgctac agctagtcaa
     1921 gcgacagata tttcacgcga agtgaatgaa tttaaagaaa gtgctgtagg taatctagta
     1981 acatcggctc aattagctat cgctaagaaa tcgggttatg atgttgactt tgcaatgaca
     2041 aacgatggcg ggattcgggc agatttgaag gtccaagaag atggaacagt tacttgggga
     2101 gcagcacagg ctgttcaacc atttgggaat atcctacaag tcgttcaaat gaccggtgag
     2161 cagatttata cagccttaaa tcaacaatat gatgaaggtg aaaaatattt ccttcaaatg
     2221 tctggaatta aatatatcta cacgaaggct gacaatccaa cggaagaaaa tccttataag
     2281 gttgttaaag ccttcaaaga agatgggacg gagattgttc cgacagaaac ctatacactt
     2341 gtcatcaacg acttcttatt tggtggtggg gatggcttct cgattttcaa agaagctaaa
     2401 ctgattggtg ctatcaatcc agatacagaa gtatttgtgg agtacttgac tgatttagaa
     2461 aaagcaggtc aaaccattag tgcaacaatt ccaggtagaa aagcatttgt agagaagtac
     2521 gtagaagaac caaaagcaga agaaaaagaa gataatgctg ggacaactac tgatgcgaaa
     2581 acacctgaga aagcaaatga cggtggcgat agtgtaacaa atcagaaagc aaacgagcaa
     2641 ccggcaccat ctggaagtat ggctcctatt tcaaataaga aaactgaaaa agcatcagga
     2701 aatcaaacac ttccaaatac cggtcaagaa gccctaggct cacttcttat tagcttgggt
     2761 ggcttagttt cactcggaat ggctgtctca gtgagacgta aggaagggga gtaggaatca
     2821 agcataaaaa cgacaaactt tcgaagtaca ttctagaatt acttctttta gagactatta
     2881 tgagagaaat acataaaaac aattgtgttt tatcttagag taggttctgc tttttgtaaa
     2941 gatttggaaa aacttatata cacg
//
LOCUS       DASFQD010000170         2957 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.173, whole genome shotgun sequence.
ACCESSION   DASFQD010000170 DASFQD010000000
VERSION     DASFQD010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2957
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.173"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(245..1705)
                     /locus_tag="U1021_002138"
     CDS             complement(245..1705)
                     /locus_tag="U1021_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEM4712624.1"
                     /translation="MDQFFKLKEQGTTVSTEIMAGLTTFFAMSYILFVNPSVLSVAGM
                     PTQAVFLATIIASAVSTLVMGLFANVPYALAPGMGLNAFFTYTVVIGLGFTWQEALAM
                     VFLCGLFNVFITVTKVRKSIIKAIPISLQHAIGGGIGVFVAYLGFKNSNLITFLTSGS
                     DIITVNGVAPAEATAETFSNGVFSVLAGGGVVPSISTFTDPSVLLTVFGLLLTAVLVI
                     KNVRGAILIGIIATTLAGIPAGVVDLSTIDFTNNNIGTAFAELGTTFLAAFDGLSSLF
                     ADSSRLPLVLMTIFAFSLSDTFDTLGTFIGTGRKTGIFSEEDEKALENGTGFNSKMDK
                     ALFADAIGTSIGALFGTSNTTTYVESAAGISAGGRTGLTAVTTAVLFLLSILILPFIG
                     IVPNAATAPALIIVGVMMVSSFLDVDWSQFEDALPAFFAAFFMALCFSISYGIAAAFI
                     FYCLVKVSTGKAKEIHPILWGATALFILNFIILAIL"
     gene            2050..2862
                     /locus_tag="U1021_002139"
     CDS             2050..2862
                     /locus_tag="U1021_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM4712625.1"
                     /translation="MKKKIIAIDLDGTLLNNDSQLSDYTISTIKKVRQAGHTVLIATG
                     RPYRMAEKFYQQLELDTPMINFNGSLVHIPGKKWQWEQNILIDKKYLLEFLKEEETFE
                     ADFIAGEYKNKFYITQKNLDKIDPALMGVEQITPDTLIKPELITSDPHSILMQTRATD
                     KYELAKEMNAYFKDELEINTWGGPLNILETCAKGVNKATALSYVLNLYQATPSDLIAF
                     GDEHNDVEMLDLAGTAYAMKNCSDTLRPHADRLTAFANFEDGVARELENLFL"
BASE COUNT         1041 a          618 c          523 g          775 t
ORIGIN      
        1 acgaaagtga cttacatcgc aagtcttatt tccaacctag aacagcctct aggctgttct
       61 agcaacctgc acctcagttc cttgtctgaa agctaattca ttcgactata aactccatcc
      121 gtttacaatt tacaatattc aatacagcat tatgctgaat aaatcacatt gattcccata
      181 tattttaatc gtaaataaaa aaactgacct tcaaatgaag atcagttcaa ggataataaa
      241 cagattacaa gatagctaga atgatgaaat tcagaataaa tagagctgta gcaccccaaa
      301 ggattggatg aatttcttta gccttacctg tcgaaacttt taccaagcaa tagaagataa
      361 aggctgcggc aataccgtaa gagatagaga agcaaagcgc catgaagaag gcggcaaaga
      421 aggctggaag agcgtcttca aactggctcc aatcaacatc aaggaaggat gaaaccatca
      481 tgactccgac gataatcaag gctggagctg ttgcagcatt tggcacaatt ccaatgaatg
      541 gtaaaatcaa aattgatagt aagaagagaa cggcagttgt aacagctgtc agaccagtac
      601 gaccacctgc agagatacct gcagccgatt caacatacgt tgttgtattt gaagtaccaa
      661 atagtgcacc gatagaggta ccaatcgcat ctgcaaagag cgccttgtcc atcttagagt
      721 taaagcctgt accattttcg agagcttttt catcttcttc tgagaaaata ccagtcttac
      781 gacctgtacc gataaaggta ccaagtgtat caaaggtatc tgacaagctg aatgcaaaga
      841 tagtcatcaa aacaagtggt agacggcttg agtcagcaaa gagcgaagat agaccatcaa
      901 aagccgctag gaaagttgta ccaagctccg caaaggctgt accgatattg ttatttgtaa
      961 aatcaattgt agacagatcc acaacacctg ctggaattcc agctaaagtc gttgcaataa
     1021 taccaatcaa aattgcacca cgcacgttct taataaccaa aacagctgtc aagaggagac
     1081 cgaaaacagt caagagaaca cttggatctg taaatgttga gatagatggg actacaccac
     1141 ctcccgccaa aacagagaag acaccatttg aaaaagtttc tgctgtcgct tcagcaggtg
     1201 caacaccatt gacagtgata atgtctgatc cagaagtcag gaaagtaatc aggtttgaat
     1261 ttttaaaacc aagataggca acgaaaaccc cgatacctcc accgatggca tgttgcaagc
     1321 taatcggaat tgctttgata atactcttac gaacctttgt aacggtgata aaaacgttaa
     1381 acaaaccgca gaggaaaacc attgccaaag cttcttgcca agtaaaacca agaccaataa
     1441 ccactgtata ggtaaagaaa gcattcaacc ccatacctgg tgccaaggcg taaggtacgt
     1501 tagcaaataa tcccataaca agcgttgata cagcactcgc aataatagtc gctaaaaaga
     1561 ctgcttgagt tggcatacct gccacactca atacgctcgg gttaacaaac aaaatatatg
     1621 acatggcaaa gaaagttgta agtcctgcca taatttccgt agaaacagtc gttccttgtt
     1681 ctttcaattt aaaaaattga tccatttttt catttctcct tttaatttac gaacgataaa
     1741 aatattataa tcaaaaaaca ttctaatttc aagtttttta atctcgaaaa cgttatttta
     1801 ttgattttcg actcaaaaca tacgtaaatc ccgaacgttg cagacttaca aaaatctata
     1861 caaaatttat cgcttctttg cttttattat ctccttttgt tatactggaa attattagtt
     1921 caagatatgg ctacctacaa gtcgtattct ttgacgcata aaacaatttc tcagcaatct
     1981 agctactacc taaacattat tcactattaa aagctaacat aacgaatcta gaaaggaatg
     2041 ctactaaata tgaagaaaaa aatcatagct atcgatttgg acggcacatt gctcaataat
     2101 gatagccaat tatctgatta taccatctca actataaaga aggtccgcca agcaggacac
     2161 accgttctta tcgccacagg tcgcccctat cgaatggctg aaaaatttta ccaacaacta
     2221 gaactggata ctcccatgat taatttcaac ggttctttag tccacatccc tggaaagaaa
     2281 tggcaatggg aacaaaatat tttaatcgac aaaaaatacc tactcgaatt tctaaaagaa
     2341 gaagaaacat tcgaggcaga ttttattgct ggtgaataca agaataaatt ctacatcact
     2401 caaaagaact tagacaagat cgatccggct ctgatggggg ttgaacagat tactccagat
     2461 acactcatca aacctgaatt aatcactagt gatcctcatt ccatccttat gcagactcgt
     2521 gcaactgata agtatgaact tgcaaaagaa atgaatgcct atttcaagga tgagttagaa
     2581 atcaatacgt ggggcggacc attgaatatc ctcgaaactt gtgcaaaagg tgtcaataag
     2641 gcaaccgctc tgagctatgt tcttaacctc taccaagcca ctcctagcga cttaattgcc
     2701 ttcggcgatg agcacaacga tgttgagatg ctagacctag caggcacagc ctatgccatg
     2761 aaaaattgta gcgatacact tcgtccacat gccgacagat tgacagcatt tgctaatttt
     2821 gaagatggtg tcgcacgtga actagaaaac ctatttttat agacatcaaa aaacctgata
     2881 aactgtcagg tttttatcat attcattgca tatttttatc acttttctga aacatgatta
     2941 tgaaaagttt tggaaac
//
LOCUS       DASFQD010000171         2814 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.174, whole genome shotgun sequence.
ACCESSION   DASFQD010000171 DASFQD010000000
VERSION     DASFQD010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2814)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2814)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2814
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.174"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            206..847
                     /locus_tag="U1021_002140"
     CDS             206..847
                     /locus_tag="U1021_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1027 domain-containing protein"
                     /protein_id="HEM4712626.1"
                     /translation="MKKEISPEMYNYNKYPGPSFARVGDKVVSENIELDLLEDYKNAF
                     DQTIFGQRFSQLMLKFDYIVGDWGNEQLRLRGFYTDDKNVKSDLKISRLDDYLTEYCN
                     FGCAYFVLANPNPQDLPAEEEDRPRRKRSRSRNRNRNQQRTEPIAPKENKSNRNDRQK
                     KGKQQNKQSEQRHFTMKNAGVKASQTERSQKRERKQSKREMNEVKRNFVIRQK"
     gene            856..1968
                     /gene="rlmN"
                     /locus_tag="U1021_002141"
     CDS             856..1968
                     /gene="rlmN"
                     /locus_tag="U1021_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEM4712627.1"
                     /translation="MKPSIYAFSQANLVDWILENGEKKFRATQIWEWLYRSRVQSFAE
                     MTNLPKSLIEKLEEHFVVNPLKQRIVQESKDGTIKYLFELPDGMLIETVLMHQHYGLS
                     VCVTTQVGCNIGCTFCASGLIPKQRDLTSGEIVAQIMLVQKYLDERNQNERVSHIVVM
                     GIGEPLDNYDNVMTFLRVVNDDKGLAIGARHITVSTSGLAPKIRDFAREGVQVNLAVS
                     LHAPNNDLRSSIMRINRRYPIEVLFEAIEDYIKVTNRRVTFEYIMLNEVNDGVEQAQE
                     LADLTKNIRKLSYINLIPYNPVSEHDQYSRSTKERTLAFFDVLKKNGVNCVVRQEHGT
                     DIDAACGQLRSNTLKKDREKARARIAAAKAKAGIRA"
     gene            1965..2486
                     /locus_tag="U1021_002142"
     CDS             1965..2486
                     /locus_tag="U1021_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEM4712628.1"
                     /translation="MRKFFQADGNLTKLGRQICKTLAGAYALAIVLLCFLPQTWYPQY
                     KDFSTPGIIQIGRLYLLPTPFNSIVNGDKVDSLADLGWIFLQNFTNIFLLFPLVFLLL
                     FLFKKWRSLGAVIRYTFCMSLVIESTQLLLDLLIDAQRVFEVDDLWTNTLGGVLAYLL
                     FIHIKKWVIKFTG"
BASE COUNT          852 a          505 c          629 g          828 t
ORIGIN      
        1 aaaacaaagg gcgagtaaat cgtccttttt tgctagagaa taatattata attgtcagaa
       61 atttctccta tatggtaaag taggagaatt tccagataaa tcgtgttata atgataaggt
      121 taagtgtgag aatttagatt ctgaccagat agattattaa tcaaatgatt tttacgtatg
      181 aagattttat aagataggag gacaaatgaa aaaagaaatt tcacctgaaa tgtataacta
      241 taataaatac cctggtccga gttttgctcg tgtcggagat aaggttgtat ctgaaaatat
      301 tgaattggac cttttggaag attacaagaa tgcttttgac cagacgattt ttggtcaacg
      361 tttttcacaa ctcatgctca agtttgatta tatcgtggga gattggggca atgagcagct
      421 gagattaagg ggattctata cagatgataa aaatgttaaa tcagacttaa aaatcagccg
      481 cttggacgac tatttgacgg agtattgtaa ttttggttgt gcttatttcg tcttagccaa
      541 tccgaatcca caagacttgc ctgctgagga ggaggataga ccgcgtcgga agcggagtcg
      601 ttctcgcaat cggaacagaa atcagcaacg gacggagcct attgcgccaa aagaaaacaa
      661 aagtaatcgc aatgaccgtc agaaaaaagg gaagcagcaa aataaacagt cggaacagcg
      721 tcattttact atgaagaatg ctggtgttaa ggcgagtcaa acagagcgtt ctcaaaaacg
      781 tgagcgtaag cagagcaagc gtgagatgaa tgaagtgaag cgtaactttg ttattcgcca
      841 gaaataggga gaaatatgaa accatcaatt tatgcattta gtcaagccaa tctggttgat
      901 tggattttag aaaacggaga gaagaagttc cgtgccactc aaatttggga atggctttac
      961 cgttctcgtg tccaatcttt tgcggaaatg accaacttgc caaaatcttt gattgaaaag
     1021 ttggaagaac attttgtagt taatccgctc aaacaacgga ttgtacagga gtctaaggac
     1081 ggtactatca aatacctttt tgaactgcca gatggcatgt tgattgagac agttctcatg
     1141 caccagcact atggcctttc agtctgtgta acgacacaag ttggctgtaa tatcggctgt
     1201 acattctgtg catctggatt gattcctaag caacgtgact tgactagcgg tgagattgtg
     1261 gctcagatta tgttggtaca aaagtacttg gatgagcgca atcagaatga gcgtgttagc
     1321 catatcgttg tgatggggat tggtgaaccg cttgataact acgataatgt tatgaccttc
     1381 ttgcgagtgg ttaatgacga caagggcttg gcaattggtg cccgtcacat cactgtttct
     1441 acgtcaggtt tggcaccaaa aatccgtgac tttgcacgtg aaggtgtcca agttaacttg
     1501 gcagtatctc tacatgcgcc aaataatgac cttcgttcga gcattatgcg gatcaaccgc
     1561 cgttatccaa tcgaggtctt gttcgaggca atcgaagact atatcaaggt gaccaaccgc
     1621 cgtgtgacct ttgagtacat catgcttaat gaggtcaacg atggggttga acaggcgcaa
     1681 gaattggctg atttgaccaa gaacatccgt aaattgtctt atatcaactt gattccttat
     1741 aacccagtta gtgaacatga ccagtacagt cgttcaacca aggaacgtac tcttgctttc
     1801 tttgatgttt tgaagaaaaa tggtgttaac tgtgtcgttc gtcaggaaca tggtaccgat
     1861 attgatgcag cctgtggtca attacgctcc aatacgctca agaaagaccg tgaaaaagca
     1921 cgggctcgta tcgcagccgc aaaagcaaag gcaggtattc gagcatgaga aaattcttcc
     1981 aagcagatgg aaacttgacc aagctaggaa gacagatttg taagacctta gctggagcct
     2041 atgctctggc tattgtctta ctttgttttc ttcctcagac atggtaccct caatacaaag
     2101 acttctctac gccaggcatc attcagattg gacgacttta tctacttccc actcccttta
     2161 atagtattgt caacggtgat aaggtagata gtctagcgga tttgggctgg atattcttgc
     2221 agaatttcac caacattttt ctactcttcc ctctggtttt tcttctcctt ttccttttta
     2281 aaaaatggcg gagccttgga gcagtcattc gttatacctt ttgcatgagc ctggttattg
     2341 agtctaccca gttattacta gacctactga ttgatgccca gcgggtattt gaagtggatg
     2401 acctctggac aaatacactt ggtggtgttt tggcttacct attatttatc catattaaaa
     2461 aatgggtcat caagtttaca ggatagactg tgaagagaat cagataatca tgtttgcgac
     2521 tattgagtga attttcaaat tttttagaaa attccaaaaa aacacttgac ctttactaaa
     2581 ttatgacgta taattctatg taatcagaag aattaataaa tggtttagct ttagagaatc
     2641 tatgggtggt gtgaatagat gctagaagtt tatgaaatgg actgatacca aatgtaggaa
     2701 atactttcaa aatcgttttc tagtttacgt ttgggtaagt gaattcgaaa caatgagaat
     2761 tcggtccgca ccccttatcg tgcatctcct tgtcagagga gaaagagtta tgga
//
LOCUS       DASFQD010000172         2797 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.175, whole genome shotgun sequence.
ACCESSION   DASFQD010000172 DASFQD010000000
VERSION     DASFQD010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2797)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2797)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2797
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.175"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            363..1235
                     /locus_tag="U1021_002143"
     CDS             363..1235
                     /locus_tag="U1021_002143"
                     /inference="COORDINATES: protein motif:HMM:NF025953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide biosynthesis protein"
                     /protein_id="HEM4712629.1"
                     /translation="MKRKLPINYLGQFYNLELEEHADIQVDDGIIAKNFCSFEVKNYA
                     TLRIGKQVFFNSSCVLRCMEKVTIGDYCLFGDGVKIYDNNHHYSHHHVEALSFSTAPI
                     HIGNHCWVGANSVILKGVTIGDNVIIGAGCTIYKDVPANTIVTSTGSMAYRPRPQYDK
                     QVTTFTASDTLEHLEYLVTSLPDIAFNILAGTHISPHLNSFRRFSNVNIYSNINDSEL
                     EDEILDRTSIYLDINHWWEVKDILNRCQQKQIPIYSFDTVAHQPELTNTMISSNHPKE
                     MVQAIQDFLKERDT"
     gene            1235..2119
                     /locus_tag="U1021_002144"
     CDS             1235..2119
                     /locus_tag="U1021_002144"
                     /inference="COORDINATES: protein motif:HMM:NF025025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM4712630.1"
                     /translation="MEKPLISIIVPIYNVENYLRQCLDSIIGQTYQNLEILLIDDAST
                     DSSVTICQEYQARDERIYLLKKTCNSGLANSRNLGIENMTGDFVTFVDSDDYLETTFI
                     EDLFTQLTLHEADIVIGEYYGFDENNGIYYIHSQEVRTEVLTIENYFSHLLTVGTITF
                     LTAWGKLFRSHLFTSKEHNRYIRFPNVRVAEDRYTTHLLVLNSHKTVYYSKNLYCYRK
                     RKGSLSDAPCSPVNTLNDIKGYETLIIDMLLAGLDPSLAVDCYKQRLLYHQQQHLTHK
                     VTENDTYRYILQKLGFQS"
     gene            2210..2488
                     /locus_tag="U1021_002145"
     CDS             2210..2488
                     /locus_tag="U1021_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712631.1"
                     /translation="MKLKEHLKLHMFWTGLVSLILMLIDNIASSYFGYNISQELNKIE
                     QTICIILNILLFLGILSNKKDSYGQEALDTISHKEEASDRNSSKALKT"
BASE COUNT          913 a          566 c          501 g          817 t
ORIGIN      
        1 taaagtaagt tttccaacag acataagagt ttgtgaggat caattcgtaa tctaccaact
       61 atatctaaaa agtaaaaaaa cgatgtacta ctccttagca ggctactgtt atagaaccag
      121 aacagatggt aacctcacaa gcacgttatc tgatccagaa tctatagaag atattgttga
      181 gagctacctg acacaagttt ttgatttatt cctacacgga tatcctttag aaaatagttt
      241 cccttactat agttatcgaa caagcagata tcttgcgata ctagaagaac gaggaaaaac
      301 aaatacagaa atatcaaata gactattaaa atttgcctat ttgatagaaa atggaaagca
      361 atatgaaacg taaactacca atcaattatt taggccaatt ctataattta gaacttgaag
      421 aacatgctga tattcaggtt gatgatggaa ttattgccaa aaacttttgt agcttcgagg
      481 tcaagaatta tgccacatta cgaatcggca agcaggtctt ttttaactcc tcctgtgttc
      541 taagatgtat ggagaaagtt accatcggtg actattgtct gtttggtgac ggagtcaaaa
      601 tttacgataa caaccatcac tactcccatc accatgttga agcgctctct ttcagcactg
      661 cacctattca tatcggcaat cattgttggg tcggagctaa ttctgttatc ctaaaggggg
      721 tgaccatcgg tgacaatgtg atcatcggag ctggatgtac catctataag gatgtccctg
      781 ctaatactat cgtgacctca actggaagta tggcctaccg accacgacca caatatgaca
      841 aacaggtcac aacctttacg gcatccgata ctctggaaca cttggaatac ctagttactt
      901 ccctgcctga tattgctttc aatatcttgg ctggaaccca tatctctcct catctcaata
      961 gttttcgtcg atttagcaat gtcaatatct atagcaatat caacgattct gaactggaag
     1021 atgagatttt ggatcgaacg tctatctatc tggacatcaa tcactggtgg gaagtcaaag
     1081 acatcctcaa ccgctgtcag caaaaacaaa tccccatcta tagttttgat actgtcgccc
     1141 atcaaccaga gctaacaaat accatgattt cgagtaacca tccgaaagaa atggtgcagg
     1201 ctattcaaga ctttttaaaa gaaagggata cctaatggaa aagccactta tttcaattat
     1261 tgtccccatc tataacgtgg aaaactatct caggcaatgt ttagatagta ttattggtca
     1321 aacctaccaa aacctagaaa ttcttctcat tgatgacgcc tcgacagata gtagcgtaac
     1381 catttgtcaa gaataccaag cacgagatga gcggatttat ttgctaaaaa aaacatgcaa
     1441 ctctggtcta gcaaattcac gaaatttagg tatcgaaaat atgactggtg actttgtcac
     1501 ctttgtggat agcgacgact acctcgaaac aacattcatc gaggatctgt ttacacaact
     1561 taccctccat gaggctgata tcgtcattgg agaatactat ggtttcgatg aaaacaatgg
     1621 catctactat atccattctc aagaagtgag gacagaagta ttgacgattg aaaactattt
     1681 ttcacattta ttgactgtgg gcactattac cttcttaact gcttggggca aattgttccg
     1741 tagtcactta tttacttcaa aagaacacaa tagatacatt cgctttccga atgtgagagt
     1801 agcggaagac aggtatacga cacatttact tgtcctcaac agtcataaaa cagtctatta
     1861 ttctaaaaat ctctattgct accgaaaaag aaagggaagt ctttcagacg ccccttgttc
     1921 ccctgttaat acattaaatg atatcaaagg ctacgaaacc ttgattattg acatgcttct
     1981 tgctggtctt gaccctagcc ttgccgtgga ttgctacaaa cagcgtctct tatatcacca
     2041 acagcagcac ttgactcaca aggtaaccga aaatgatact taccggtata tcctacaaaa
     2101 attagggttt caatcctaat ccgatagtta atcggtctac catcggatta gaaaacagct
     2161 atccttttgg gctatcagga gaaaatttca atgacagaaa gggattcata tgaagctaaa
     2221 agaacatctc aaactccata tgttttggac tggtcttgtt tcccttattc tcatgctgat
     2281 tgacaatatt gcctcaagtt attttggcta caatatcagt caggaattga ataagatcga
     2341 gcaaaccatt tgtattattc tcaatattct tctatttttg ggcatattaa gtaacaagaa
     2401 agacagctat ggtcaagaag cccttgatac catcagccac aaggaagaag cttctgatag
     2461 gaacagcagt aaagctttga aaacttgata gtgattcagg ctgacagctt gtggcggata
     2521 tatagcaaac caaatcaaaa acaggattag ctacgtttat caatttgaga actctaaagt
     2581 tattttagga gtgtgtttct aacactataa ctcaaacttg tcctttccct aattcaaacc
     2641 actataaaaa gctgaccttg ttatccggat tttatactca atgaaaatca aaatcagact
     2701 agccccaaag gtttggggaa actttggggg ttggagatag gcgaacgtag ttcgtttcta
     2761 cttatgcaga tagaaccctg ttactatttt gtttcaa
//
LOCUS       DASFQD010000173         2686 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.176, whole genome shotgun sequence.
ACCESSION   DASFQD010000173 DASFQD010000000
VERSION     DASFQD010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2686)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2686)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2686
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.176"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            42..2621
                     /locus_tag="U1021_002146"
     CDS             42..2621
                     /locus_tag="U1021_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014638868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhO family protein"
                     /protein_id="HEM4712632.1"
                     /translation="MKKIFTKTSIYYLLSFLIPLTIISIVLAFQGIWWGSDTTILASD
                     GFHQYVIFNQTLRNTLHGDGSLFYTFSSGLGLNFYALSSYYLGSFLSPIVFFFDLQSM
                     PDAIYLVTIVKFGLTGLSTYFSLKGIHKNLKEEWALLLATSFSLMSFSTSQLEINNWL
                     DVFILLPLVLLGLHRLLKKQGPILYYITLTCLFIQNYYFGYMVTIFLTLWTLVQLSWI
                     DSQRIKRFINFTIVSILSALSSMFMLLPTYLDLKTHGETFTKIVNLKTEDSWYLDFFA
                     KNLVGSFDTTKFGSIPMISVGFVPLILALLFFTLKEIKPTVKLSYALFFTFIISSFYL
                     QPLNLFWQGMHAPNMFLYRYAWALSITVIYLAAETLARLHQVSIKNFTLIVSFFLICF
                     TSTFIFRDHYEFLTDVNFLLTLEFLIAYFILFVAMIRYKSSLKWINIVLLFFTFLELG
                     LHSHYQIQGISDEWHFPSRSNYEEKLTDIDSIVKSTKTTTDSFYRIERLLPQTGNDSM
                     KFNYNGISQFSSIRNRASSSVLDKLGFRSDGTNLNLRYQNNTIIADSLFGVKYNLATT
                     DPNKFGFTLNQSQSTINLYENSFNLGLALLTKGIYKDVNFTNLTLDNQTNFLNQLTGL
                     SQKYYHTLSDVVSQNTVELSNRMTVNKVDNEDAAKATFLVNIPANSQVYLNLPNLTFS
                     NENQKKVVITVNNQSSELTLDNAFSFFNVGSFTTDVQVQVNVYFPENNQVSFDKPQFY
                     RLDLLAFQQAISILQEKQVVTKTDGNKVTVDFVTDKESSLLLTLPYDKGWNATIDGKP
                     IKIQKAQDGFMKVDVSPGQTKLVLTFVPNGFYLGLLISFGAVFVFFSYQFIGYYYSKN
                     REY"
BASE COUNT          842 a          507 c          383 g          954 t
ORIGIN      
        1 gaccggtcaa gttctttccc acttcctttt cttttaaatc tatgaaaaaa atatttacaa
       61 aaacatccat ttattatctc ttatctttcc ttattccgct gactattatt tctatcgtct
      121 tagcatttca aggaatctgg tggggaagtg atacaacaat attggccagt gatggtttcc
      181 atcagtatgt tatttttaat caaacattac gaaatacttt acacggagac ggctctttat
      241 tttacacatt ttcaagtggt ttaggactca atttttatgc tctatcctcc tattacctag
      301 gttcattcct atctccaatt gtctttttct ttgatttaca atccatgcct gacgctatct
      361 accttgtcac tattgtcaaa tttggattga ctgggttgtc aacttatttc agtctaaagg
      421 gtatccataa aaatttgaaa gaagaatggg cactattact cgctactagt ttttctctga
      481 tgagttttag tacaagtcaa ttagaaataa acaactggct agacgttttt atactcctcc
      541 cactcgttct tcttggattg catcgattat taaaaaaaca gggtccgatt ctctactaca
      601 taacattaac atgcttgttt atccaaaact attacttcgg ttatatggtg actatttttc
      661 taacattatg gacattggtt caattatcat ggatagatag tcagagaatc aaaagattta
      721 tcaactttac aatagtgtca attttatctg ctctaagcag catgttcatg ttgttaccaa
      781 cctacttgga tttaaaaact catggtgaga catttacaaa aattgtcaac ctaaaaaccg
      841 aagactcttg gtatctggac ttctttgcaa aaaacttagt tggtagcttt gatacaacaa
      901 aattcggttc tattcccatg atctctgttg gtttcgttcc attaatactc gctttactat
      961 tcttcacatt aaaagaaata aaaccaactg tcaaactctc ctatgctcta ttctttacat
     1021 tcattatttc aagtttctac ctacaaccac tcaatctttt ttggcaaggt atgcatgcgc
     1081 caaacatgtt cctctatcgt tatgcatggg ctctatcaat aaccgttatc tatttagcag
     1141 cagagacatt ggcacgacta catcaagtaa gtattaaaaa ttttactctg attgtttcat
     1201 tttttctcat ttgctttact tctaccttta tttttagaga tcattatgag tttctaacgg
     1261 atgtaaattt cctactcaca ctagaatttc taatagccta cttcattctt tttgtagcaa
     1321 tgattcgcta taaatcatcc ttaaaatgga ttaatattgt tttattgttc ttcactttct
     1381 tagaacttgg attacatagt cattatcaga ttcaggggat ttctgatgaa tggcattttc
     1441 ctagccgatc aaactatgaa gaaaaattga cagatattga cagtattgta aagtctacaa
     1501 agactacaac tgattcattt tatcgtatag aacgtctatt accacaaact ggcaatgata
     1561 gcatgaaatt caattacaac ggtatttctc aattctcctc cattcgaaat cgtgcttcca
     1621 gctcagtact agataagctc ggtttccgtt cagacggtac caatttgaat cttcgttatc
     1681 agaataatac aattattgct gatagcctat tcggagtcaa atataattta gctactacgg
     1741 acccaaataa gtttggtttc acactgaatc agagtcagtc tactattaat ctttacgaaa
     1801 atagttttaa tctagggtta gccctattga ctaaagggat ttacaaagat gtcaatttta
     1861 caaatctgac tctcgataat caaacaaatt ttcttaatca actaacaggg ctatctcaaa
     1921 aatattacca cactttatca gatgttgttt cacaaaatac agttgaactg agcaatcgaa
     1981 tgactgtcaa caaagtggac aatgaggatg ctgcaaaagc aactttctta gtaaatatac
     2041 ctgcaaatag ccaagtatac ttaaatttgc caaatttaac attctcaaat gagaatcaaa
     2101 aaaaagttgt cattactgtc aacaatcagt caagtgagct tacactagat aatgctttct
     2161 ctttcttcaa tgtggggagc tttactacag atgtacaggt tcaagtcaat gtatattttc
     2221 ctgaaaataa tcaagtttct tttgataaac cacaatttta tcgattggac ttattagctt
     2281 tccaacaggc tatttccatt ctccaagaaa aacaagtagt aacaaaaact gatggtaata
     2341 aagtaactgt tgattttgta accgataaag aatcctcact cctccttact ttaccctatg
     2401 ataaaggatg gaatgcaacc attgatggta aacctatcaa aatccaaaaa gcgcaagatg
     2461 gttttatgaa agtggatgta agtccaggtc aaactaaact agttttaacc tttgtaccaa
     2521 atggtttcta tctaggttta ctgatttctt ttggtgcagt ttttgtattt ttctcctatc
     2581 aattcattgg atactattat tctaagaacc gagaatacta aactttctcg gttttttctt
     2641 gtaaaaaaca aaaaaccttg atttctcaag gtttcctatt ctttat
//
LOCUS       DASFQD010000174         2670 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.177, whole genome shotgun sequence.
ACCESSION   DASFQD010000174 DASFQD010000000
VERSION     DASFQD010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.177"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(16..792)
                     /gene="recX"
                     /locus_tag="U1021_002147"
     CDS             complement(16..792)
                     /gene="recX"
                     /locus_tag="U1021_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HEM4712633.1"
                     /translation="MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQ
                     EFCELRDFAQFSYGKNLALYYLSFKQRTKKEVSDYLKKYEIEENNIVKIVTVLEEEKW
                     LDDGNYVDSYVRQNALNGDKGPAMIRQKLMQKGIPKLLIDKRLAEEDFSELAGKIGEK
                     LVGIYQRKLPLRALQDKVVQGLMGKGFSYETAKQSLGQLELVADEENEDDLIAKELDK
                     QYRKYSRKYEGYELKQRLIQALARKGYDFDRIQAVLRDYR"
     gene            830..2182
                     /gene="rlmD"
                     /locus_tag="U1021_002148"
     CDS             830..2182
                     /gene="rlmD"
                     /locus_tag="U1021_002148"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HEM4712634.1"
                     /translation="MNLQVNQRIPLKIKRMGINGEGIGFYQKTLVFVPGALKGEEIFC
                     QITSVKRNFVEAKLLKINKESKFRVKPACDIYRACGGCQIMHLRYDKQLDFKQDLLQQ
                     ALKKFKPAGYENYTIYPTIGMDKPSHYRAKLQFQTRSFKDQVKAGLYAENSHRLIGIT
                     NCYVQDAETQEIINGIAKLLTKHRIPIYNERKQHGIRTVMVRKARKTGQVQVIFITSC
                     QVNLIKLIDELTSQFPSIITIALNWNRQKTSDIYGEKTEILWGEQAIDEAVLDYEFSL
                     SPRAFYQLNPQQTEILYGEAVKALDISGDEDLIDAYCGVGTIGFAFAKKVKSVRGMDI
                     IPEAIEDAKANAKRMGLSNTHYEAGKAEEIIPKWYQEGYRADALVVDPPRTGLDEKLL
                     KTILNYKPAKMVYVSCNVSTLARDLVELSKAYKVEYIQSVDMFPHTARTEAVVKLSKK
                     "
     gene            2479..2547
                     /locus_tag="U1021_002149"
                     /pseudo
     CDS             2479..2547
                     /locus_tag="U1021_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012677188.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          873 a          588 c          448 g          761 t
ORIGIN      
        1 acttactttg agaatttacc gataatcacg aaggacagcc tgaatccgat caaagtcata
       61 accctttcga gccaaagcct gtatcaacct ttgcttcaat tcgtagcctt catatttacg
      121 actatatttt ctatactgct tatccaattc cttggcgatt aaatcatctt cattttcctc
      181 atcagccaca agttccaact gacccaggct ttgtttggcc gtctcataag aaaaaccctt
      241 ccccatcaat ccctgtacaa ctttatcttg caaagctcga agaggcaatt ttctttggta
      301 tatacccacc aatttctccc caatcttccc agcaagctct gaaaaatctt cctctgccag
      361 ccttttatca atcagcagtt taggaattcc tttctgcatc aacttctgac gaatcatagc
      421 tggtccctta tctccattta gagcattctg acggacatag ctatcaacat aattcccatc
      481 gtccagccat ttttcctctt ctagtaccgt cactatctta acaatattgt tttcttcaat
      541 ttcatatttt tttagataat cactaacttc ttttttggta cgttgcttga aggaaaggta
      601 ataaagtgct agatttttcc cataagaaaa ctgagcaaaa tcgcgaagct cacaaaactc
      661 ctgctccgtg atttcctttc ccttactaag catgaagcga acaattgtgt cttccgtaat
      721 atataaacta tcctgaccat ccacttcaag taaataaaga cgtttcttct tttcaatttt
      781 tgtaattctc attctttcat tatacaggat ttttcggtaa aataataata tgaatctaca
      841 agtaaaccaa cgaatcccct taaaaatcaa acgaatgggc atcaacggag aaggcatcgg
      901 attttatcaa aaaacgctag tctttgtccc tggtgccctt aagggggaag aaattttttg
      961 tcaaattacc tcagtcaaac gaaatttcgt tgaagcaaaa ttgttaaaaa tcaacaagga
     1021 atcaaaattc cgtgtcaagc cggcctgtga catctatcga gcctgtggtg gttgtcaaat
     1081 catgcacctc cgctatgata aacaattaga cttcaaacaa gatctcttgc agcaggccct
     1141 aaaaaagttc aaaccagctg gctacgaaaa ctatactatt tatccaacaa tcggtatgga
     1201 taagcctagc cactatcgtg ccaaattaca gttccagact cgatctttca aagatcaagt
     1261 caaggccggt ctctatgcgg aaaattccca tcgcttgatt ggaattacga attgttacgt
     1321 ccaagatgcc gaaacacaag agattatcaa cggaatcgca aagctactca ccaagcaccg
     1381 tattcctatt tataatgagc gcaagcaaca tggaatccgc acggttatgg tccgcaaggc
     1441 tcgaaaaaca ggtcaagttc aagtgatatt tatcacctct tgtcaggtta atcttattaa
     1501 attaattgat gaactcacca gtcaatttcc aagtataatc actattgctc taaactggaa
     1561 tagacagaaa acgagtgata tttatggtga aaaaacagaa attttatggg gagaacaagc
     1621 tatcgatgaa gctgttttag attacgaatt ctcactatct ccacgggcat tttaccaatt
     1681 aaatccccaa caaacagaaa ttctctatgg cgaggccgtc aaggctttgg atatttcagg
     1741 agatgaagac ttgattgatg cctactgtgg cgtgggtaca atcggcttcg cctttgctaa
     1801 aaaggtcaaa tctgttcgag gtatggacat tattccagaa gccatcgagg atgctaaagc
     1861 aaacgctaag cgaatgggac tatccaatac ccactatgag gcaggtaaag cagaagaaat
     1921 cattccaaag tggtaccaag aaggctacag ggccgatgcc ttggtagttg atcctccacg
     1981 aactggactc gacgaaaagc tcctcaaaac cattttgaat tacaaaccag ctaaaatggt
     2041 ttatgtatcc tgcaacgtct ccactcttgc aagggacctt gttgagctaa gcaaagccta
     2101 caaggtagaa tacattcaat ctgttgacat gtttccccac acagcacgga ccgaggcggt
     2161 tgttaaacta agcaaaaaat aaaaggcact ataagactat gacgggtaaa cccactatgg
     2221 tcatatagag cctttttgag tgtagaaaaa agtcccctac gacctacact gatacccatt
     2281 taaaatcaaa aatagccacc taccactcaa agtagatatg gagcattttg attttgttat
     2341 tttttgagaa aaaaacagct acttgaaatc cacaatcctc aactcaaact tataaattaa
     2401 ggttttacat gttataagta aattagactt gctatttttg atttttattg agtatgaaaa
     2461 acaacaaaac tcacaatttc caacaccaaa tcagaaacaa ctaacaatct catcaaagtc
     2521 attaaaagaa atgcctttgg attcaggaaa atggaaacta gaaaaacgga ttttgatgct
     2581 ttgaacagtg aaaagttgag gagagctctt ttcagctcat ctcctaaaaa caagaaagag
     2641 agaacgaatt tcgtcctctc taggtgttag
//
LOCUS       DASFQD010000175         2661 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.178, whole genome shotgun sequence.
ACCESSION   DASFQD010000175 DASFQD010000000
VERSION     DASFQD010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2661
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.178"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            259..900
                     /locus_tag="U1021_002150"
     CDS             259..900
                     /locus_tag="U1021_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004228788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM4712635.1"
                     /translation="MDYVLEVLPSLLNGAAVSLQVFFLVLMLSLPLGAVFAFLMQIKF
                     KPLQWLLHFYVLIMRGTPLLLQLIFVYYVLPSVGITFDRMPAVILAFTLNYAAYFSEI
                     FRGGIEAIPKGQYEAAKVLKFTPVQTIRYIVLPQVVKIVLPSVFNEVMTLVKDTSLVY
                     ALGVSDLLLASRTAANRDASLAPMFIAGTIYLLMIGAVTLISKQVEKKFDYYR"
     gene            910..1542
                     /locus_tag="U1021_002151"
     CDS             910..1542
                     /locus_tag="U1021_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM4712636.1"
                     /translation="MLELRNLSKRFEDKQIFSNYDLVIPEGKIVAIVGQSGGGKTTLL
                     RMLAGLETIDSGTLMYNGQELPLEELGKRHLLGFVFQDFQLFPHLSVLENLVLSPMKT
                     QNMSRSEAEDKALKLLDTLGLANHATAYPFSLSGGQKQRVALARAMMIDPEIIGYDEP
                     TSALDPELRKEVEKLILENRATGITQIVVTHDMQFAENIADEIIKIEPKH"
     gene            1569..2399
                     /locus_tag="U1021_002152"
     CDS             1569..2399
                     /locus_tag="U1021_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000759190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM4712637.1"
                     /translation="MKKMMLGALALVTSLTLVACGSNDSATKSDNWIAYESEKSVTIG
                     FDKTFVPMGFEQTDGSYTGFDIDLANAVFEKYGITVKWQPIDWDLKETELNNGNIDLI
                     WNGYSITDERKEKVLFTNPYMDNQQVLVTKKSSNISQVSDMKDKILGAQAGSSGYSVF
                     ESQPAILKDIVQNNDASQYATFNEALIDLKNDRIDGLLIDRVYANYYLQQEGIIADYN
                     IIDAGFENEAFAVGARKSDTTLVENINKAFAELYKEGKFQEISQKWFGEDVATDAVKK
                     "
BASE COUNT          790 a          465 c          558 g          848 t
ORIGIN      
        1 gttgttcaat tccaatttga atctcattgc gatcagagag agttaagtgt ttgtttttca
       61 ttgtcagtta ccaacttgtc ccatagtaag ttctacctta tttctttgtc tcagtctaat
      121 ttccagtttt taagacagac tagaacttac tttgggaatt tactttttgt taaatttatt
      181 aaaaattctg aaaaattctt tgaaattaag gatatttttt gatatactag aacctaatca
      241 ttcttttagg agagctctat ggattatgtt ttggaagttc tgcccagtct actaaatggt
      301 gctgcagtct ccttgcaagt attttttcta gtattgatgt tatccttgcc attaggagct
      361 gttttcgctt ttttaatgca gattaaattt aaacccttgc aatggttatt gcatttctat
      421 gtattaatta tgcgaggaac ccccttgctt ttacaattaa tttttgttta ttacgtctta
      481 ccaagtgtgg gtattacatt tgaccgaatg cctgctgtga ttctggcctt tacgctcaac
      541 tatgcggcct atttctctga aattttccgt ggtggtattg aagctattcc aaaaggtcag
      601 tatgaagctg ctaaggtatt gaaatttacc cctgttcaga ccattcgcta cattgtctta
      661 ccacaggttg taaaaattgt tctgccaagt gttttcaatg aagttatgac tttggtaaag
      721 gatacttctt tggtctatgc acttggggtt agcgatttgt tgttggctag tcgtactgcg
      781 gccaatcgtg atgccagctt ggcgcctatg tttatcgcag gtacaatcta cctattgatg
      841 atcggtgcgg taacactgat ttctaaacaa gtagaaaaga aatttgatta ttatagatag
      901 gaggaagtca tgttagagtt acgcaattta tcaaaacgct ttgaagataa acagattttc
      961 tccaactatg atttggtcat tccggaaggg aaaattgttg ccatcgttgg tcaatctggc
     1021 ggtggtaaga caactctttt acggatgttg gctggtttag agactattga ttcaggaact
     1081 ttgatgtata atggtcaaga actgccatta gaggagttgg gaaaacgaca tttgctgggc
     1141 tttgtcttcc aggacttcca gcttttcccg cacctatccg tattggaaaa cttggttctc
     1201 tctcctatga aaacgcaaaa tatgtcgcgt tcagaggcgg aagacaaggc ccttaaactc
     1261 ttggatactc ttggacttgc taaccacgca actgcctacc cattttcatt atcgggtgga
     1321 cagaaacaac gtgtggcctt ggcgcgtgcg atgatgattg atcctgagat tatcggctat
     1381 gatgaaccaa cttcggccct agaccctgaa ttaagaaaag aagttgagaa actgattctt
     1441 gaaaataggg ctactggaat cacgcaaatt gtggtcaccc atgatatgca gtttgctgag
     1501 aatatcgcag atgaaatcat caaaattgaa ccgaaacact aagaaaagga acaaatatga
     1561 tgatgaatat taaaaaaatg atgcttggag ctcttgctct tgtaacttct ttgactcttg
     1621 ttgcttgtgg ctccaatgat tcggctacta agtctgataa ttggatagcc tacgagtctg
     1681 aaaaatccgt tacgattggc tttgataaga cctttgttcc aatgggattt gaacagacag
     1741 atggttctta cacaggtttc gatattgact tggctaatgc agtctttgaa aaatatggaa
     1801 ttactgtaaa atggcaacca attgactggg acttgaaaga aaccgaattg aataacggga
     1861 atattgattt aatttggaat ggttattcta ttacagatga gcgtaaggaa aaagttcttt
     1921 tcacaaatcc ctacatggat aaccaacaag ttcttgtaac taaaaaatct tccaatatta
     1981 gccaagtatc tgatatgaag gataagattt taggtgcgca agcaggttca tctggttatt
     2041 cagtatttga atcacaacca gctattttga aagatattgt tcaaaataac gatgcaagtc
     2101 agtatgcgac cttcaatgaa gccttgattg acttgaaaaa cgatcgtatt gatggccttt
     2161 tgattgaccg tgtgtatgca aattattact tgcaacaaga gggaattatc gcagattaca
     2221 acatcattga tgcaggtttt gaaaatgaag ccttcgcagt tggtgctcgt aaatcagata
     2281 cgacactcgt agaaaacatt aataaggcgt ttgctgaatt atataaagaa ggtaaattcc
     2341 aagaaatctc ccaaaaatgg tttggtgagg atgttgcaac cgatgcagta aaaaaataat
     2401 aatgtaagaa aaagtgactg aacaagacat ccatgatggt tacgccctca tccacagaat
     2461 aatgaaaaga actcgtgaaa acggtggggg tgtacaccaa tatcattaac ttaagattct
     2521 acgaggctga gcaaaaagct cagcgccact tctcggagtt cgtgtcaaca tctcagcgca
     2581 gtggttgatt ggcttacaca gtccggggga ctgtttaagg ttggagatag gatttgcaaa
     2641 gcaaatcaca gcagttcgtg t
//
LOCUS       DASFQD010000176         2597 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.179, whole genome shotgun sequence.
ACCESSION   DASFQD010000176 DASFQD010000000
VERSION     DASFQD010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2597)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2597)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2597
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.179"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..396
                     /locus_tag="U1021_002153"
     CDS             <1..396
                     /locus_tag="U1021_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712638.1"
                     /translation="KNTEQVANFKENLVRAFFEMRDEVAEFRYQRTLEKPKRKALHEA
                     IETWQEAPKHAHSTVTNLLLKGTTGMNKRQLVAHRGGFNGVDSLTSQELIRYQALEDM
                     AIAMINLGMTYQEIKNMVFRPLKNAPQGA"
     gene            863..1306
                     /locus_tag="U1021_002154"
     CDS             863..1306
                     /locus_tag="U1021_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712639.1"
                     /translation="MKQYFEQFEERLQVAEEKLDILSEWHIAKRHKGATEIAEECRTA
                     VTSLWMEFYRLSEAYKEAEADHEEFYQANVDYLLGELRQHDNEVLELAIKIHGERPNY
                     LLFDYLDKEQRIFENPDNLATAPTGNIWHYIRSLIVKDQKERGIL"
     gene            1308..1511
                     /locus_tag="U1021_002155"
     CDS             1308..1511
                     /locus_tag="U1021_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712640.1"
                     /translation="MQEMTIEQALTLIAIFTPLNLFLWFGVGLGTYQLHSKPKTKSEG
                     NHTRPLENERYGAYIQLAGKRYN"
     gene            1523..1858
                     /locus_tag="U1021_002156"
     CDS             1523..1858
                     /locus_tag="U1021_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712641.1"
                     /translation="MTKKQLPPHLYKVFKLLPLGMDLPITAPDIEKLTGLDVRTIREH
                     IRQLIVDYGIPVCGGRDNKLGGYYIPQNEAERLAGVLPLQRQYDQEHKRIHALLTADL
                     EDWRKYRDV"
     gene            1851..2132
                     /locus_tag="U1021_002157"
     CDS             1851..2132
                     /locus_tag="U1021_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000492138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HEM4712642.1"
                     /translation="MFSLSRESEQDLTNGLLDMVGKYLEAREKVKPRTLGLITAQQVK
                     DELGIKDKTLKRWEDNGLRRYQPPLEDTRKIFYRVSDVLKFLGVENGKN"
     gene            2119..>2597
                     /locus_tag="U1021_002158"
     CDS             2119..>2597
                     /locus_tag="U1021_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001140518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage replisome organizer N-terminal
                     domain-containing protein"
                     /protein_id="HEM4712643.1"
                     /translation="MAKTKIYFWLKIDKKFFDNIFIKRLKTIPGGYTMTVIYIRLMLE
                     SLESDCILYYEGYFENLKEELALKLDVSEDDIDMTMAYFTKCGLIQIDEDQNAELPQA
                     KAMVMSETNWASYKREQRQNKERLDNVQKSLTNSNLCPTEKELEKEIELEKEIELEQ"
BASE COUNT          914 a          490 c          594 g          599 t
ORIGIN      
        1 aagaataccg agcaagttgc aaactttaaa gagaacctag tccgagcatt ctttgaaatg
       61 cgtgacgagg tggcagagtt tcgctaccag aggacactag agaaaccaaa gcgcaaggca
      121 ttgcatgaag ctattgaaac atggcaggaa gccccaaaac acgcgcacag cacggttaca
      181 aaccttttac taaagggaac taccggaatg aacaaacgcc agctagtggc acaccgtggc
      241 ggatttaatg gtgttgatag cctaaccagt caggagctta tcagatacca ggcactagag
      301 gacatggcta ttgctatgat caacttaggc atgacatacc aagaaattaa aaatatggta
      361 ttcagaccac taaaaaacgc accgcaaggc gcgtgagagc aacaaaaaag gcttatgcaa
      421 ccgaccaaag tagcaagcct tttaaccact aactaaaaca aaattaacaa gcaggcaagc
      481 tgttattaaa agggttttag taaagatttt tatagctaga ttataccata tctaggacac
      541 tttgaccata cagagggcgc taacccttaa aactggagta gaaaagtatt aggtgctggt
      601 atcggcatta ggttgcaatg gacccagggc aatctaaacc accctaagaa aattacacac
      661 agctaggcta ttattttggc acaggcttac atgaccacgg ggcaacctgg taagtttggg
      721 gtggttatcc gctgggaata gtctgggcta ggtatagaaa tcgtatagta aagaaccaat
      781 aagcaaagtc ttttgaactc actgagacag cccacacggg ccattacaca gaaaatcata
      841 aacagaaaaa tgaggtaaaa aaatgaaaca gtattttgaa caatttgaag aacggttaca
      901 agttgcagaa gaaaaattgg acattctgag cgagtggcat atagccaaac gtcacaaggg
      961 agctactgaa attgctgaag agtgtaggac agcagttaca tcgctttgga tggagtttta
     1021 cagactatca gaggcatata aagaggctga ggcggaccat gaagagtttt atcaagcgaa
     1081 tgtggattat ttgttagggg aattaagaca acacgataat gaggtgctag aacttgcgat
     1141 aaaaattcac ggagaacgcc ccaactatct tttatttgat tatctggata aagaacagcg
     1201 gatttttgaa aatcctgaca atttagcaac agcgccaaca gggaatattt ggcactatat
     1261 ccgcagtcta attgtcaaag accaaaaaga acgaggtatt ttataaaatg caagaaatga
     1321 caatagaaca agctttaaca ctcatagcaa tatttacacc gctaaacctc tttctatggt
     1381 ttggcgttgg tttaggcact tatcagctcc atagcaagcc caaaaccaag tcagagggta
     1441 atcataccag acctcttgaa aacgagcgct acggggctta tatacagctt gcaggaaaac
     1501 gctataacta ggagggcaac gaatgacaaa aaaacaacta ccaccacact tatacaaagt
     1561 tttcaagctc ctaccgcttg gaatggattt gccaatcacc gccccagata ttgagaagct
     1621 gacaggcttg gacgtccgaa ccattcggga acatatccgc caacttatag ttgattatgg
     1681 tattcccgtt tgtggcggac gagataacaa gctagggggc tactatatcc cccagaatga
     1741 agctgagcga cttgccggag tgctaccgct ccaacgacaa tacgaccagg aacataagcg
     1801 tattcacgcg cttttgactg ctgacttaga agactggagg aagtatagag atgtttagcc
     1861 taagcagaga gagcgagcaa gatctaacta atggcttgct ggatatggtt ggaaagtacc
     1921 tggaggcgcg tgagaaagtc aaaccaagga cacttggact aatcacagcc caacaggtta
     1981 aagatgaact aggcataaag gataagactt tgaaacgctg ggaagataac gggctaagac
     2041 gttaccagcc cccgctagaa gatactagaa aaatcttcta tagggtcagt gatgttttga
     2101 aatttttggg ggtggagaat ggcaaaaact aaaatatatt tttggttgaa gattgataaa
     2161 aaattttttg ataatatttt cattaagaga ctgaagacaa ttccaggtgg ttacactatg
     2221 acagtaattt acatccgtct tatgcttgaa agtttagaaa gtgattgcat tctctactac
     2281 gaaggttatt ttgaaaatct caaggaagaa ttggctttga agttggatgt gtcggaagat
     2341 gatatcgata tgaccatggc atactttaca aaatgcgggc taattcagat tgacgaagac
     2401 caaaacgcag aattaccaca ggctaaagct atggttatga gtgaaacaaa ctgggctagc
     2461 tacaaacggg aacaacgaca aaacaaagag aggttggaca atgtccaaaa gtctttgact
     2521 aattccaact tgtgtccaac agagaaagag ctagagaaag agatagagct agagaaagag
     2581 atagagctag agcaaca
//
LOCUS       DASFQD010000177         2591 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.180, whole genome shotgun sequence.
ACCESSION   DASFQD010000177 DASFQD010000000
VERSION     DASFQD010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.180"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            336..1052
                     /locus_tag="U1021_002159"
                     /pseudo
     CDS             336..1052
                     /locus_tag="U1021_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921854.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
     gene            1200..2375
                     /locus_tag="U1021_002160"
                     /pseudo
     CDS             1200..2375
                     /locus_tag="U1021_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636218.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
BASE COUNT          895 a          506 c          559 g          631 t
ORIGIN      
        1 attcttagaa aataacaaaa tagataaata ttagataccc tctagaaaaa atttagttta
       61 ggatgttata ctaacgctaa aacaataata tcaatttttg aaaatactag attggaataa
      121 aaatctaatc gccatatttt agaacatgta cttacaagta aagagctttt atgtaagaga
      181 tagtttttcg ctaatcaagt taattttttg agggaatgct ggctgtattt tgaaaaaacg
      241 aacgatgagt agcttaaaaa tgccttagat gggagtgcta acctgtaaat acaggttctt
      301 agtaaattga agtaaataga gtaaaggagc acattatgag caaacaaaaa gttgtgacaa
      361 atctattgct tagtacagct gtactaggtg gttttctaat atgtcacgta tcatctgtaa
      421 gcgcagaaac aggcaatctt caagaaatac ctactgaatc tgctacggtt agctcagaaa
      481 atcaaactgc gaccgcagtc gatggaattt cacctacgga taaccaatta cctacgtcag
      541 aagaaggtga tgaacaggct ccagaagaaa aactagtttc tagcgattct acgagagaag
      601 aaagtgctac gcaggtagcg acggatccgg atgcgccatc tcaatcatta agtgtgtcag
      661 gggcggaaat ttcaacggca gattcaaata ttcaacaagc cgaagagaaa ctgattcaag
      721 aatcgaatta tcatagattt gacactcatc aaggtgaaca gattaggaag gcagtatcta
      781 tagaaaaaat atcggcagat aatgacgaaa ttaagtggaa agtaactttt gatagaaaaa
      841 attggacctt tagtggagag gggagtggct attactttat tcttctaaaa ggcttacaat
      901 taaccaaaat tattgatagc cagtctgaag aggatatttt caataagttc cctaaggatg
      961 tcaatagtga ggcaaattct ggcgggcagc cgtatcgctt ttttagtaga gaaaaaaatg
     1021 ctaataatga tgagcgtagt tttgaaagtc agtggggttg gtctgttgga cgtgtaggag
     1081 gagagctaga aaaatggaag gaagaaagtt ccagcgtcta ttttctacaa gtacagcgag
     1141 attccgttgc taaagaaaaa gcgacatatg aactgacggc acaggtgaca aatcgagaaa
     1201 tgcagacttt cccggtttta gctgtggtga agaattttaa agagcgaata tttttctcca
     1261 gagatgagat tacttctgct gctggtttga gattaaaggt atcggaaagt gctaagccaa
     1321 ataatgaagg gattactatt atcggagatt catctccaga aagcgacagg actcctgaac
     1381 cgcggggaga taggacttcg gatatagttg taccaaaggc agatgttcca aaagttgagc
     1441 aaccaaaacc aaaggaccct gaagttcaac tgcctgctcc taaggctccg gaatctgtgc
     1501 caccaaaagt aatgcctcca gcacccaaag ttccagacgt taagacgccc aaagaggcgc
     1561 ctctgccacc aaaaactccg gaagttgagg ttccaaaagt aatgcctccg acaccgaagg
     1621 ttccagatgt taagacgcca aaagttgagt accctgatac agatgctcct gtgattgagt
     1681 caccaaaagc tcctgaaact gaacgaccag aagtcttacc accgacgcca aaagtcccag
     1741 aagttgaggt tccgaaagta attccaccga cctcaaaagt tccagaagct gagctaccga
     1801 aagttgagca gccaaaaccg aaggttccag aagttcacct tcctgctcct aagtctccgg
     1861 aaactgagcc acccaaagta atgtccccag cacccaaagt tccagacgtt aagacgccaa
     1921 aataggcgcc tctgccacca aaaactccgg gcgttgaggt tccgaaagta acaccaccga
     1981 cctcgaaagt tccagaagtt caccttcctg ctcctaagtc tccagaagtt gaggttccga
     2041 aagtaacacc accaacctca aaagttccag acgttaagac gccaaaaact ccggaagttg
     2101 cgcacccaga agttgagaaa cccgccggaa tccaaccaga aaagggtcaa cctgaggtta
     2161 ataaacccaa tattatccat ccggaggtgc ttcaatccga agttaagaaa acggaatctg
     2221 gagtttcaat ggctccaaag gtaggaatac aaaaagagac tttaccaaat acgggtgaaa
     2281 caagtaatac cctagtatgg ctaggtggtg ctctagctgc ccttgcatca agtttgtatc
     2341 ttttcaaaca acacaggcaa agagaagagg agtgatttta cgctaatact atagtttttg
     2401 gtacaccaat aaggcttatt taccatggac taagaaaatt tagaacagtt gtaaatagaa
     2461 aacgttccaa aatctgaact gcaccccaaa agttagaggt taactctagt ttttgaggtg
     2521 cttttcttgt aaggtcaaga cacaaagaca agattgaaat ttatctcttg caatgatatg
     2581 aaggagttgg t
//
LOCUS       DASFQD010000178         2421 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.181, whole genome shotgun sequence.
ACCESSION   DASFQD010000178 DASFQD010000000
VERSION     DASFQD010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.181"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            44..129
                     /locus_tag="U1021_002161"
     tRNA            44..129
                     /locus_tag="U1021_002161"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:78..80,aa:Leu,seq:aag)
     gene            364..1245
                     /locus_tag="U1021_002162"
     CDS             364..1245
                     /locus_tag="U1021_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001018994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase"
                     /protein_id="HEM4712644.1"
                     /translation="MPLVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKQAP
                     VLIQTSMGAAKYMGGYKVARNLIANLIETMNITVPVAIHLDHGHYEDALECIEVGYTS
                     IMFDGSHLPVEENLAKAKEVVELAHAKGISVEAEIGTIGGEEDGIVGTGELAPIEDVV
                     AMVATGIDFLAAGIGNIHGPYPANWEGLDLDHLRKLTEAVPGFPIVLHGGSGIPDAQI
                     QEAIKLGVAKVNVNTECQIAFANATRKFAAAYEANEAEYDKKKLFDPRKFLADGVKAI
                     QASVEERIDVFGSANKA"
     gene            1640..1828
                     /locus_tag="U1021_002163"
     CDS             1640..1828
                     /locus_tag="U1021_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008536053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEM4712645.1"
                     /translation="MAKVCYFTGRKTISGNNRSHAMNQTKRAVKPNLQKVTVLIDGKP
                     KKVWASARALKSGKVERV"
BASE COUNT          832 a          404 c          527 g          658 t
ORIGIN      
        1 ttgacaaggc tagttcctaa tgatatacta gttcttgtgt taagcgggga tggcggaatt
       61 ggcagacgcg caggactaag gatcctgtga ccgctttagg tcgtgtgggt tcaagtccca
      121 ctctccgcat agtggactag ctaaggctag tccttttgct ttgtctagat aagtgcagag
      181 cacgatatat gctagttcat aaattacaag aatgatacga aacaggcatt attatggctt
      241 tcatgaaaag atatgtgaaa gttttctcaa aactagacgg tttcaactag cattttcaaa
      301 ataaaaatgg tagaatagaa gagtatgagg tgcaacctca aaaaatatta ggaggctatc
      361 gaaatgccat tagtttcagc agaaaaattt gtccaagcag cgcgtgacaa cggttatgca
      421 gttggtggat ttaacacaaa caaccttgag tggactcaag ctatcttgcg tgcagcagaa
      481 gcaaaacaag ctccagttct tatccaaact tctatgggtg cagcgaagta catgggtggt
      541 tacaaagtag ctcgtaactt gattgcaaac ttgattgaaa caatgaatat tacagttcca
      601 gttgctattc accttgacca cggtcactac gaagatgcac ttgagtgtat cgaagttggt
      661 tacacttcta tcatgtttga cggttcacac cttccagtag aagaaaacct tgcaaaagca
      721 aaagaagttg tagaattggc gcacgctaaa ggtatctcag ttgaagctga aattggtact
      781 atcggtggtg aagaagatgg tatcgtaggt actggtgaat tggctccaat tgaagacgta
      841 gtagcaatgg ttgcaactgg tattgacttc ttggcagcag gtatcggtaa catccacggt
      901 ccatacccag caaactggga aggtcttgac cttgaccact tgcgtaaatt gactgaagct
      961 gtaccaggtt tcccaatcgt attgcacggt ggttcaggta ttccagatgc acaaatccaa
     1021 gaagcaatca aattgggtgt tgctaaagtt aacgtaaaca ctgagtgcca aatcgcattt
     1081 gcaaacgcaa ctcgtaagtt tgcagcggct tatgaagcaa acgaagcaga gtacgataag
     1141 aaaaaactct ttgacccacg taaattcttg gcagacggtg tgaaagctat ccaagcatct
     1201 gttgaagagc gtatcgacgt attcggttca gcgaacaaag cttaatgtaa ctgcgaagaa
     1261 atctcagatt tcaagtaaac aaagcacaag tttcttagat taaaccaaaa aggattttct
     1321 ttcgagaatc ctttttttat tatgtagttg attaagtttg atctagttct ttgccatgaa
     1381 gaaatctacg atagaagtga gcagagaaca gttaaaatat aaactgctcc aaagttttca
     1441 taactgtaat aacttagaga acgaagaatt atggatgggg cgcaaactgt agtattaaaa
     1501 tatttaccta tgagtataga tactttaaaa aaataaaaat gaaaataatt cttgccaagt
     1561 ccaatctttt ctgttagaat aatatggtat gtggtgctag cacatccgat atatttgatc
     1621 aaatgaggag gaagatacaa tggctaaagt atgttatttc actggtcgta agactatatc
     1681 aggtaacaac cgttcacacg ctatgaacca aactaaacgc gcagttaaac caaaccttca
     1741 aaaagtaact gttttgattg atggtaaacc taaaaaagtt tgggcttcag cacgtgcact
     1801 aaaatcaggc aaagttgaac gcgtataatg acaaagtcgt tagaaaaatc tagcgacttt
     1861 tgtttttgga aaaaatagcc tagatataaa gtcggtgagg agcaaattcg gccactacat
     1921 aataaacagg aaagaatatc agctatatag ctcttcacat tgttgctgaa aagttaacaa
     1981 agaaggaatg ttgtcaaaaa taaactgtgt attgatgtgg gagattttct caagcacgaa
     2041 catataaact tggattgaca ttagggggag catatctgta ctgattctat aagaagggaa
     2101 tcacgaactg gaagaataga gagtgttgct cagtttttct cagtttttcg ccaaatttca
     2161 taaaaaaatc ccaaaaaacc gattgacaat gcatataagt cgtgatagac tgattgagtt
     2221 gtctcttgag ggactggtta atagagaaac gaaaaaaagt ttcgaaaaag tgttgacaag
     2281 accatcagaa gatgatagaa taattgagtt gtctcttgag ggactggtta acagaggaac
     2341 gaaaaaaagt ttcaaaaaag tgttgacaaa gttcacaaga aatgataaac taagatagtt
     2401 gtcgcgagag cgtgataaca a
//
LOCUS       DASFQD010000179         2382 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.182, whole genome shotgun sequence.
ACCESSION   DASFQD010000179 DASFQD010000000
VERSION     DASFQD010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.182"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..90
                     /locus_tag="U1021_002164"
     CDS             <1..90
                     /locus_tag="U1021_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HEM4712646.1"
                     /translation="KSRKRVKHDIALDKLSVKEYEDPFRDNGK"
     gene            complement(226..777)
                     /locus_tag="U1021_002165"
     CDS             complement(226..777)
                     /locus_tag="U1021_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM4712647.1"
                     /translation="MTESAKTKLQQALILLLDEEDFERISVSKICKEAGVHRSTFYHY
                     YDNQFDLLEDAYQYLTQLFLAEFQSYPANSLPIETDLTGDAYLISYLQFVKDHQKIYQ
                     IYLRHELDFHHKERFEHLVELIFTPRFHAQGIQNPVQIAYVSSFFLAGITQVVSKWVR
                     NGCAESIEEMADIIQICISRKQS"
     gene            1156..1785
                     /locus_tag="U1021_002166"
     CDS             1156..1785
                     /locus_tag="U1021_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019335829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEM4712648.1"
                     /translation="MKIAVVAANGKAGSLIVKEAVARGFEVTAIVRGENKTVAQQVLQ
                     KDVFDLTADDVIGFDAVVDAVGAWTADTVHMVPDAAKHLAAILKDSQTRLLVVGGAAS
                     LYVNPEHTLTVADVTEFPAEVLPVLNAHKEALEALRQVDDVNWTYVSPAGDFQADGER
                     TGRYILGGEELVLNSKGESVISYADYAIGMIDEIASGNHIKARISLVSE"
     gene            1795..2244
                     /locus_tag="U1021_002167"
     CDS             1795..2244
                     /locus_tag="U1021_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEM4712649.1"
                     /translation="MQISNKFTIAIHALAFIHLFQDQQRVTSKVLANSIQANPVIIRS
                     VLSGLKDAGIVDAKQGSGGFRLAKPLDDISLYDIFVTVDNIDKKGLFNFHENPHPDCI
                     VGGNIHAAVDDKLVQVQTAMEKELKTMYMSDVLVDLEKAIEEKAKRT"
BASE COUNT          709 a          437 c          555 g          681 t
ORIGIN      
        1 aaatctagaa agcgagttaa acatgatata gcacttgata agttaagtgt aaaagagtat
       61 gaagatccct ttagggataa tggcaagtag tacgaatgcc tctttaagag gctagtgacg
      121 agtcaaaagc agtgaggctt gaacaaagtg aaagccagcg tctttaggcg ctggctggtg
      181 atgtgggctt atagcccttg ttcaaaccac ccgtttgacg ggtggtcatg attgctttct
      241 agagatacag atttggataa tgtcagccat ctcttcaatc gattcagcac agccatttct
      301 cacccacttg gatacgactt gtgttatgcc tgccagaaag aagctagata cataggcaat
      361 ttgtactgga ttttggatcc cttgagcatg gaagcgagga gtaaaaatca attctaccaa
      421 gtgttcaaag cgttctttgt ggtgaaaatc taattcgtga cggagataaa tctgatagat
      481 tttctggtgg tcttttacaa attgtaggta ggaaatgagg taggcatcgc ctgttagatc
      541 ggtttcaatt ggtagactat tagcgggata agattggaat tcagctaaga aaagttgggt
      601 aaggtattga taagcatcct ctaacaagtc aaattgattg tcataataat ggtaaaaagt
      661 agagcgatgt accccagcct ccttgcaaat tttgctgacg gaaatacgtt caaaatcttc
      721 ctcatctaag agaagaatca atgcttgttg tagttttgtt ttggctgatt cagtcatagt
      781 gtccgctccc ttggtttcat tacttactag tttacctcaa cattctgttt gaaacaagtc
      841 gcttttactc cttcgtttca tttatgacaa ttgatacaac tgacaagttt ctccaaatcc
      901 ttaacttctt cttggatgaa tttaactgac tagcaaacgg cctgtcagcc ttgaaaccga
      961 ggaggaagta gaatagacta gaaaagattt gaggctccat ctcagatctt ttttctgcga
     1021 taaatgaacc tgtcaacaat tttcaaaaaa aagttgtaac aaaactgttg acaactattg
     1081 gggattagga tatactagtg tacgcaaagt tgtaacaaaa caatttacaa caaaaacatt
     1141 tcggaggaaa agaaaatgaa aatagcagta gtagcagcga acggtaaagc aggtagcttg
     1201 attgtgaaag aagcggtagc acgtggtttt gaagtaacgg ccatcgttcg tggtgaaaat
     1261 aagacagtcg cacagcaggt tcttcaaaag gatgtttttg acctgacagc cgatgatgtg
     1321 attggttttg atgcggtagt ggatgcagta ggtgcctgga cagcagacac tgtgcatatg
     1381 gttcctgatg cagccaaaca tttggcggct atcctaaaag attcacaaac acgcttgctt
     1441 gtggttggtg gagcagcaag cctctatgtt aatccagaac ataccttgac tgtggcagat
     1501 gtgacagagt ttccagcgga agtattgcct gtgttaaatg ctcacaagga agcacttgag
     1561 gcccttcgtc aagtagatga tgtcaactgg acctatgtaa gtccggcagg tgatttccaa
     1621 gcagacggcg aacggacagg tcgctatatt cttggcggtg aagagttggt cttgaacagc
     1681 aagggagaaa gcgttatttc ctatgcagat tatgcgattg gtatgattga tgagattgca
     1741 tcaggtaatc atatcaaagc acgtattagc cttgtcagtg agtagaagag ttctatgcag
     1801 atctcaaata aatttaccat tgccattcat gccttggctt ttatccatct ctttcaagat
     1861 cagcagcgtg ttaccagcaa ggttttggcg aacagcattc aagccaatcc tgttatcatt
     1921 cgctcggttc tatctggttt gaaggatgcg ggaattgtag acgctaagca gggtagcggc
     1981 ggttttcgtt tagcaaagcc acttgatgac attagccttt atgacatctt tgttacggtt
     2041 gacaatatcg ataagaaagg cttgtttaat tttcatgaaa atccccatcc cgactgtatc
     2101 gtagggggga atatccatgc tgctgtggac gacaaactcg tccaagtcca gacagctatg
     2161 gagaaagaat tgaaaactat gtatatgtct gatgtcctgg ttgacctaga aaaagccatt
     2221 gaagaaaaag cgaaaaggac ttaaatggga gtgggaaaga actcgaccat tcatcgaaga
     2281 gttcgtcaac aagtctttat ttcaagttgt tgagctgaaa cagtctatcc ccagacatca
     2341 atttatgtga gctgactgcc gtcagcttat atctcccact tt
//
LOCUS       DASFQD010000180         2208 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.183, whole genome shotgun sequence.
ACCESSION   DASFQD010000180 DASFQD010000000
VERSION     DASFQD010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.183"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..>2208
                     /locus_tag="U1021_002168"
     CDS             <1..>2208
                     /locus_tag="U1021_002168"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase"
                     /protein_id="HEM4712650.1"
                     /translation="GRRATFEEQKSLALYVGWGGLADVFNEEKTGQWLEARNELTELL
                     SPEEFQAAKESTLTAFYTPPLVIDAIYLGLKNLGFENGNILEPSCGVGNFIGRLPSEM
                     GRSKIYGVELDRISGRIAQELYQKSTIQIQGYEDTSFSNNFFDVAVGNVPFGDFKVSD
                     RDYDREKFLIHDYFFAKSIDKVRSGGVIAFVTSSGTMDKQDSRVRQYLANRCDLLGAI
                     RLPNSTFKGLAGTEVTSDILFLQKRDVIREQDVDWIHLARDENGFTYNKYFVDHPEMV
                     LGKMTEVSGRFGPSLACIPNEENLSVQLTTAVEEIQGEIPNIKLDQQINDGQDILPAL
                     DHVKNFSYTMIDGIPYFREDSVMIRQHMTDKEINRLKNYLAVVESLKEVIQLQKENAS
                     DELIQESQHRLNKAYDTFKVNHDYINSTLNRRNLREDSNYPLVSSIEKLDKGKFAGKG
                     DIFFKRTIAKAKVVEHCESSHEALILSISEKGRVDFDYMTKLTDKPREVLVKELKGEI
                     YLDIPYIYPETKLLPFSEKGMKEMGLTYVPADQYLSGNIREKMAIMDFYIERYQAIEN
                     PDKDVLDNLIELKFQRDKLQGVMPKELTASEISVRLGTTWIPTSDINQFIFDTLQPGY
                     YAKQAINVHFSPFTSEWKIDGKTQDSRNDLANLTYGTSRVNAYRLIEDSLNLRDTRVY
                     DTVYTDGGDKRQVLNKKETMLAGEKQELLKEAFKDWIFNDQRRRHRLEKLYNE"
BASE COUNT          746 a          335 c          481 g          646 t
ORIGIN      
        1 aggtagacgt gctacttttg aagaacagaa atcgcttgcc ttatatgttg gatggggtgg
       61 tctggctgat gtttttaacg aggagaaaac tggacaatgg ttagaagcac gaaatgaact
      121 tacagaattg cttagtccag aagaatttca agcagccaag gaatccacct tgactgcttt
      181 ttatacacca ccattggtca tcgacgctat ttatctggga ttgaagaatc ttggatttga
      241 aaatggtaat atcttggagc cttcttgtgg ggttggaaac ttcatcggtc gcctaccaag
      301 tgaaatgggg cgttcaaaaa tctatggtgt agagttagat agaatcagcg gtaggattgc
      361 acaagaacta tatcaaaaat ccactattca aatacaagga tacgaagata caagcttttc
      421 aaataatttc tttgatgtag cagttggaaa tgttccgttt ggtgatttta aagtttcgga
      481 tagagattat gaccgagaaa aattcttgat acatgattat ttctttgcca agtctatcga
      541 caaggttcgc agtggtggag tgattgcatt tgtgacctct tctggaacca tggacaaaca
      601 agatagtcga gtccgtcagt atctggccaa tcggtgcgat ttattggggg ccattcggct
      661 accaaattca acttttaaag gtttggcagg aactgaagtt accagtgata ttcttttctt
      721 gcagaagcga gatgttattc gagagcaaga tgttgactgg atacatttag caagagatga
      781 gaatggattt acttacaata agtattttgt agatcatcca gagatggtct tgggtaaaat
      841 gacagaagta tctgggagat ttggtccaag tttagcttgt attcctaatg aggaaaattt
      901 gagtgtacaa ttgacaactg ccgttgaaga aattcaaggt gagataccaa atattaaact
      961 agatcaacaa atcaatgatg ggcaagacat acttccagct ttggatcatg ttaagaattt
     1021 ttcttatacc atgatagatg gaattcccta ttttcgtgaa gattcggtga tgattcggca
     1081 acacatgaca gacaaggaaa tcaatagact aaaaaattat ctagcggttg tcgaaagtct
     1141 gaaagaagtc attcaactcc aaaaagaaaa tgctagtgat gagttaattc aagaaagtca
     1201 acataggtta aataaagctt atgatacttt caaagtcaat catgactata ttaactctac
     1261 actaaaccgt aggaatttgc gtgaggatag taactatcca ttagtatcat caattgagaa
     1321 actggataaa ggtaagtttg cagggaaagg ggatattttc tttaaacgga cgattgctaa
     1381 agcaaaagtt gtcgagcatt gtgaatctag tcatgaagct ttgatacttt caatttcaga
     1441 aaagggaaga gttgactttg attatatgac taagttgacc gacaaaccga gagaagttct
     1501 cgtaaaagag ttgaaaggcg agatatatct cgatattccc tacatatatc ctgaaacaaa
     1561 attacttcca ttttcagaga aagggatgaa agaaatggga ttaacgtatg ttccagcaga
     1621 ccaataccta agtggaaata ttcgtgagaa aatggcaatc atggattttt acattgaaag
     1681 gtatcaagca attgaaaatc cagataaaga tgttcttgat aatttaattg aactgaaatt
     1741 tcagcgagat aaacttcagg gagtcatgcc taaagaattg accgcaagtg aaatatcggt
     1801 acgacttggt acaacttgga ttcctacatc agatatcaat cagtttattt ttgatacttt
     1861 acagcctggt tattatgcta aacaagcaat aaatgttcat ttttctcctt ttacatcaga
     1921 gtggaagatt gatggcaaga cccaggatag tcgcaatgac ttagcaaatt tgacttatgg
     1981 gacaagcagg gtaaatgctt atcgacttat tgaagattca ttgaatttgc gtgatactag
     2041 agtgtacgat actgtctata ctgatggtgg tgataagaga caagttctaa acaagaaaga
     2101 aactatgtta gcaggtgaga agcaggaact tctcaaagag gctttcaagg attggatttt
     2161 taatgaccaa aggcgaagac atcgtttaga aaaactctat aatgagaa
//
LOCUS       DASFQD010000181         2126 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.184, whole genome shotgun sequence.
ACCESSION   DASFQD010000181 DASFQD010000000
VERSION     DASFQD010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2126
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.184"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(8..1672)
                     /locus_tag="U1021_002169"
     CDS             complement(8..1672)
                     /locus_tag="U1021_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004193336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DAK2 domain-containing protein"
                     /protein_id="HEM4712651.1"
                     /translation="MSKITTSLFQEMVQAASTRLNKQAEYVNSLNVFPVPDGDTGTNM
                     GMTITNGAKEVADKSASTVGEVAQILSKGLLMGARGNSGVITSQLFRGFGQSVKGKIE
                     LDGKDLAQAFQHGVEVAYKAVMKPVEGTILTVSRGAATAALKKAEETDDAVEVMRATL
                     DGANRALKKTPEMLPVLKEVGVVDSGGQGLVYIYEGFLSALTGEYIASEDFEATPAVM
                     SEMINAEHHKSVAGHVATEDITFGYCTEIMVALRQGPTYVKDFDYEEFRNYLNDLGDS
                     LLVVNDDEIVKVHVHTEDPGLVMQAGLQYGSLVKVKVDNMREQHEAQVEKVESFQKPA
                     EQKEYAIIAVAAGEGLTEIFKSQGVDYVISGGQTMNPSTEDFINAIELVNARNVILLP
                     NNKNILMAAQTAAEVAEVAVKVVETKTLPQGFTSLLAFDPSRDLESNFEAMTASLAEV
                     KSGSVTTAVRDTTIDGLEIHENDNLGMVDGKIVVSNPDMMETLVATFDKMLDEDSEIV
                     TIYIGEDGDEELAQTLAKQLEEQFEDVEVEIHQGNQPVYPYLFSVE"
     gene            complement(1675..2040)
                     /locus_tag="U1021_002170"
     CDS             complement(1675..2040)
                     /locus_tag="U1021_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018365170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HEM4712652.1"
                     /translation="MTVKINTKDGQIELTDDVIATVVGGATTEIFGVVGMASKSAIKD
                     NFQALLRKENYSKGVVIKTLEDGRIAVDVYTVMSYGVKISEVSRNIQERVKFNLENQL
                     GISVDAVNVFIQNIKVVGE"
BASE COUNT          598 a          527 c          368 g          633 t
ORIGIN      
        1 attttgttta ttctacgctg aaaagatatg gatagactgg ttgatttcct tgatggattt
       61 cgacctcaac atcttcaaat tgttcttcta gctgtttagc aagagtttga gcgagttcct
      121 catcaccatc ttcaccgatg tagatagtca cgatttcgct gtcttcatcc aacattttat
      181 caaaggtagc cacaagtgtc tccatcatat ctggattaga aaccacaatc ttgccatcaa
      241 ccataccaag gttgtcattc tcatggattt caagaccgtc aatggttgta tcgcggaccg
      301 cagttgtcac gctaccactt ttcacctctg cgagagatgc cgtcatcgct tcaaagttgc
      361 tttccaaatc acgacttgga tcaaaagcaa gcaagctagt aaaaccttgt ggtagggtct
      421 tagtttccac aaccttaacc gcaacttctg caacctcagc agccgtctga gcagccatca
      481 agatattttt gttgtttggc aacaagatga cattgcgggc attgaccaat tcaatagcat
      541 tgataaaatc ttctgttgat gggttcatgg tctgaccacc tgaaatcaca tagtcaacgc
      601 cttgtgattt gaagatttct gtcaaacctt ccccagcagc taccgcaata atagcatact
      661 ctttttgttc agccggtttt tggaaacttt ctactttctc aacctgagct tcatgttgct
      721 cacgcatatt gtccactttt accttgacca agctaccata ttgaagaccc gcttgcatga
      781 ccaaacctgg atcttctgta tggacatgga ctttaacgat ctcatcatcg ttgaccacaa
      841 ggagggaatc cccaaggtcg ttaaggtagt tacggaattc ttcataatca aagtccttga
      901 cataagtagg cccctggcga agagctacca tgatttctgt acagtaacca aaggtaatat
      961 cttcagtcgc tacatgacct gcaactgact tgtggtgctc agcattaatc atttcagaca
     1021 taacagcagg tgtcgcctca aaatcttccg aagcaatata ctcacccgtc aaagctgaca
     1081 agaagccttc ataaatgtaa acaagacctt gtccacctga atcgacaact ccaacttcct
     1141 tcaatactgg aagcatctct ggcgttttct taagagcacg attagcacca tcaagagtag
     1201 cacgcatgac ctcaaccgca tcatcagtct cttctgcctt tttcaaagct gcagtggctg
     1261 ccccacgcga aacagtaaga attgtacctt caactggctt cataacggct ttataagcca
     1321 cttctacacc atgttgaaag gcttgcgcca aatccttacc gtccaattca atcttgcctt
     1381 taacagattg cccaaaaccg cggaacaatt gcgacgtaat aacacctgag tttccacgag
     1441 ctcccatcaa caagccctta gaaagaattt gcgcaacttc tccaacagta gaagcagact
     1501 tatctgctac ttctttagca ccgttggtaa tagtcatccc catgttggta ccagtatccc
     1561 catctggaac tgggaaaaca ttgagtgagt tcacatattc ggcttgttta ttcagacgag
     1621 ttgatgctgc ctgcaccatt tcttgaaata aactagttgt aattttagac acaattattc
     1681 tcctacgact ttgatatttt ggataaagac attgacggca tctacagaga tacctagttg
     1741 attttccaag ttgaacttaa cgcgttcttg gatgttgcga gatacttcac tgatttttac
     1801 accgtagctc atcacagtat aaacatcgac tgcaatgcga ccatcttcca aggtcttaat
     1861 cacaacacct ttagaataat tttcttttct caaaagtgct tgaaaattat ccttgatcgc
     1921 agacttacta gccatcccaa caacaccgaa aatctcagtc gtagcaccgc caacaactgt
     1981 ggcaatcacg tcatcagtca attcgatttg gccgtcttta gtattgattt taacagtcat
     2041 aattcgttac ctcaaatagt tttatcactc cattttacca cattttctgc tttctgtaaa
     2101 aaacaagctt gttacatcgg atttta
//
LOCUS       DASFQD010000182         2119 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.185, whole genome shotgun sequence.
ACCESSION   DASFQD010000182 DASFQD010000000
VERSION     DASFQD010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.185"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..1313)
                     /locus_tag="U1021_002171"
     CDS             complement(<1..1313)
                     /locus_tag="U1021_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEM4712653.1"
                     /translation="MKKVLIHTLLKSYSLLVIGIVIFFASILSYISWYQYDTNRIRIQ
                     QEVADGLKEELDYYQGRVGNYLADYITDRDRLDSLYHYFQLSPSQYQVWLLSHPHLMV
                     KRISLQDSVRTLYLYYPFVEGVDIAPMDANTVFVSTSDLKSGKKVTAENYKAPQHSIS
                     MTLFSPSTTEGIATIYVTIDADLLEQYIQRKTDLPMTVRVQDSLDREFYSLRPDVASP
                     PLSYRMSGDLQIAVGVDQQYAIEKVGSLVGIIFLGSSCLVALLLLVLRRVFKRYEVQV
                     LDIVDTIQQIRGEDRHLRLQTDNKEQEMYLISSEINQMLDAMDQSIQDIYRLQLAQKD
                     ANMRALQAQINPHFLYNTLEFFRMYAVSKQMDELGDMIYEFSSLLRSSVTQAKMTTVA
                     EELSFCEKHSYICQIRYPRSIAYAYQMDPGCERVEIPRFVIQPLV"
     gene            complement(1310..1915)
                     /locus_tag="U1021_002172"
     CDS             complement(1310..1915)
                     /locus_tag="U1021_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF624 domain-containing protein"
                     /protein_id="HEM4712654.1"
                     /translation="MLGWLDRLFTLLFFLMKLSAIYLVLLLLGGVVLGISPANGTILY
                     LYDNYHMDASKYNFREAFGYFKEHFIRLNLGLGLVLLLIGLLFSGIWLLIQLPQTWWM
                     PAVLITNAFGLFYVFALYALFLKLQVHFEFSLKTGLQLAAVSLFLDWKALVKFLLGSL
                     VCGFLLFKLPLILFFFLPVLWLLFLYDAFDPVYKKVDKDYL"
BASE COUNT          699 a          438 c          426 g          556 t
ORIGIN      
        1 tctaccagag gctggattac aaaacgagga atttcaaccc tttcgcaccc aggatccatt
       61 tgataggcat aggcaatgga acggggatag cggatttgac aaatgtagct atgtttttcg
      121 caaaatgaaa gttcttctgc caccgttgtc atttttgcct gtgtcacact actgcgaagc
      181 aagcttgaaa attcataaat catatcccct agctcatcca tctgcttgct gactgcatac
      241 atacggaaaa attccaaggt attgtagaga aaatgggggt taatctgggc ttgtaaggct
      301 cgcatattgg catctttctg agctaactgc aagcgataga tgtcttgaat actctggtcc
      361 atagcatcca gcatctgatt gatttctgat gaaataagat acatttcctg ctctttattg
      421 tccgtctgta gacgaagatg cctgtcttcg ccacgaatct gttgaatggt atcaacaatg
      481 tccagtactt gaacttcata tcgtttaaac acccttctca ggaccagtag taaaagagca
      541 acgagacaac tacttcctag aaaaatgatt ccgactaggc tgccaacttt ttcaatagca
      601 tactgctggt caactccaac tgcaatttgc aaatccccac tcattcgata ggagagcgga
      661 ggtgaggcaa catctggtcg cagactataa aattcccgat ccagagaatc ttgaactcta
      721 acggtcatgg ggagatccgt cttacgttga atatattgtt cgagcaaatc cgcatcgatg
      781 gtgacataga tggtcgcaat accttctgtt gtcgatggag aaaataaggt catcgaaata
      841 ctatgttgcg gagccttgta attttcggcc gtgacctttt taccagactt taagtcagag
      901 gtagaaacaa agacagtatt tgcatccatc ggagcaatat cgactccttc tacgaaggga
      961 taatagagat agagagtgcg aacagaatcc tgcaaggaaa tccgtttgac catcaggtgt
     1021 gggtgactca gtaaccagac ctggtattga gaaggagaca attgaaaata gtgataaaga
     1081 ctgtctagac gatccctgtc cgtaatgtag tctgctagat aattcccaac ccgtccttga
     1141 taataatcca actcctcttt tagaccatct gctacttcct gttgaatgcg gatgcgattg
     1201 gtatcatact gataccagct gatgtaggaa agaatactgg caaagaaaat gacaatccca
     1261 atcactaata aagaataact tttcaaaaga gtatgaatta aaactttttt cataagtaat
     1321 ccttgtcaac tttcttataa actggatcaa aggcatcata gagaaacaag agccatagga
     1381 ccggtaggaa gaagaataaa atcaagggaa gtttgaatag caagaaccca cagacgagac
     1441 tgcctaacaa aaatttgacc agggctttcc aatcaagaaa aagcgagaca gccgccaact
     1501 gtaagcctgt ttttagacta aattcaaaat gtacttgaag ttttaaaaag agcgcataga
     1561 gtgcaaaaac atagaaaaga ccaaaagcat ttgtaataag aactgctggc atccaccagg
     1621 tctggggcaa ttgaatcaag agccaaatgc cgctaaataa aagaccaatc aataagagga
     1681 caagaccaag tccaaggtta agccgaataa aatgctcttt aaaatagcca aacgcctctc
     1741 gaaaattata cttagatgca tccatatgat agttatcgta gaggtaaagt atcgttccat
     1801 ttgctggtga aatgcccagc actacgcctc ctagcaatag aagaaccaaa tagatggcac
     1861 tcaatttcat gaggaagaaa agaagagtaa aaagcctgtc taaccaccct aacattgtat
     1921 attcctcctt ttttatctat tttatcaaaa aatcggtgct ttttgtatat attaacataa
     1981 aacaaatgca aaagaggctg agcaaaaagc ccagcgccac ttcttagagt tcgtgtcgac
     2041 atctcatcgc agtggttgat tggcagattt gttcgtgttt tacactccaa atccgaccta
     2101 tacgactgat gcgaacaga
//
LOCUS       DASFQD010000183         2064 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.186, whole genome shotgun sequence.
ACCESSION   DASFQD010000183 DASFQD010000000
VERSION     DASFQD010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2064)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2064)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2064
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.186"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(4..77)
                     /locus_tag="U1021_002173"
     tRNA            complement(4..77)
                     /locus_tag="U1021_002173"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(41..43),aa:Ile,seq:cat)
     gene            complement(94..167)
                     /locus_tag="U1021_002174"
     tRNA            complement(94..167)
                     /locus_tag="U1021_002174"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(131..133),aa:Met,seq:cat)
     gene            complement(180..253)
                     /locus_tag="U1021_002175"
     tRNA            complement(180..253)
                     /locus_tag="U1021_002175"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(217..219),aa:Pro,seq:tgg)
     gene            complement(301..374)
                     /locus_tag="U1021_002176"
     tRNA            complement(301..374)
                     /locus_tag="U1021_002176"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(338..340),aa:Arg,seq:acg)
     gene            complement(393..476)
                     /locus_tag="U1021_002177"
     tRNA            complement(393..476)
                     /locus_tag="U1021_002177"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(440..442),aa:Leu,seq:taa)
     gene            complement(484..555)
                     /locus_tag="U1021_002178"
     tRNA            complement(484..555)
                     /locus_tag="U1021_002178"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(521..523),aa:Gly,seq:gcc)
     gene            complement(568..640)
                     /locus_tag="U1021_002179"
     tRNA            complement(568..640)
                     /locus_tag="U1021_002179"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(605..607),aa:Thr,seq:tgt)
     gene            complement(659..740)
                     /locus_tag="U1021_002180"
     tRNA            complement(659..740)
                     /locus_tag="U1021_002180"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(704..706),aa:Leu,seq:tag)
     gene            complement(744..816)
                     /locus_tag="U1021_002181"
     tRNA            complement(744..816)
                     /locus_tag="U1021_002181"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(781..783),aa:Lys,seq:ttt)
     gene            complement(882..954)
                     /locus_tag="U1021_002182"
     tRNA            complement(882..954)
                     /locus_tag="U1021_002182"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(919..921),aa:Asp,seq:gtc)
     gene            complement(957..1029)
                     /locus_tag="U1021_002183"
     tRNA            complement(957..1029)
                     /locus_tag="U1021_002183"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(994..996),aa:Val,seq:tac)
     gene            complement(1035..1150)
                     /gene="rrf"
                     /locus_tag="U1021_002184"
     rRNA            complement(1035..1150)
                     /gene="rrf"
                     /locus_tag="U1021_002184"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(1342..>2064)
                     /locus_tag="U1021_002185"
     rRNA            complement(1342..>2064)
                     /locus_tag="U1021_002185"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          524 a          590 c          449 g          501 t
ORIGIN      
        1 atatggacct tgtaggactt gaacctacga ccgctcggtt atgagccgag agctctaacc
       61 agctgagcta aaggtccagc aaacaagagt atatagcggc gaaggggatc gaacccccga
      121 cctcccgggt atgaaccgga cgctctagcc agctgagcta caccgccaaa ataatataat
      181 cgggaagaca ggattcgaac ctgcgacacc ttggtcccaa accaagtact ctaccaagct
      241 gagctacttc ccgatactat taaaaataaa gctcccctaa cgtctccatt aagcgagtga
      301 tgcaccctag aggattcgaa cctctaaccg cctgattcgt agtcaggtac tctatccagt
      361 tgagctaagg gtgctaacta ttataatctt catgccgagg accggaatcg aaccggtacg
      421 atgttgccat cgcaggattt taagtcctgt gcgtctgcca gttccgccac cccggcctct
      481 caaagcgaac gacgggattc gaacccgcga cccccacctt ggcaaggtgg tgttctacca
      541 ctgaactacg ttcgcaatct ttcctaatgc cggctacatg acttgaacac gcgaccctct
      601 gattacaaat cagatgctct accaactgag ctaagccggc taaattatat ttctcctatg
      661 cgggttaagg gacttgaacc cccacgcccg aaagcgccag atcctaaatc tggtgcgtct
      721 gccaattccg ccaaacccgc atatgactcg tgctgggctc gaaccagcga cccattgatt
      781 aaaagtcaat tgctctacca actgagctaa cgagtcgaaa atatgaagca aactccgttt
      841 gctctatctc caatttcaaa tagtctccca gactatttga acggtcccga cgggaatcga
      901 acccgcgatc ttcgccgtga cagggcgacg tgataaccgc tacactacgg gacctatggg
      961 agttaacggg atcgaaccgc tgaccctctg cttgtaaggc agatgctctc ccagctgagc
     1021 taaactccca atttgctaag cgactaccgt atctaacagg gggcaacccc caactacttc
     1081 aggcgttcta gggcttaact gctgtgttcg gcatgggtac aggtgtatct cctaggctat
     1141 cgtcacttaa ctaatgagtc ttgtcaactc aaaattgaat atctatattc taacaagaaa
     1201 ccgtgcgctt gtcaatattg actcgtgagt aattgtactc aggctaaatt cttagcgaaa
     1261 aagataaact tcctagagtc tattgactct gcgtcagttt cctattttca tacagaattt
     1321 gtaacgcctt cgttacttat cttggataag tcctcgagcg attagtattg gtccgctaca
     1381 tgtgtcgcca cacttccact tccaacctat ctacctgatc atctctcagg gctcttacta
     1441 acataaagtt atgggaaatc tcatcttgag gtgggtttca cacttagatg ctttcagcgt
     1501 ttatcccgtc cctacatagc tacccagcga tgcctttggc aagacaactg gtacaccagc
     1561 ggtaagtcca ctctggtcct ctcgtactag gagcagatcc tctcaaattt cctacgcccg
     1621 cgacggatag ggaccgaact gtctcacgac gttctgaacc cagctcgcgt gccgctttaa
     1681 tgggcgaaca gcccaaccct tgggaccgac tacagcccca ggatgcgacg agccgacatc
     1741 gaggtgccaa acctccccgt cgatgtgaac tcttggggga gataagcctg ttatccccag
     1801 ggtagctttt atccgttgag cgatggccct tccatacgga accaccggat cactaagccc
     1861 gactttcgtc cctgctcgag ttgtagctct cgcagtcaag ctcccttata cctttacact
     1921 ctgcgaatga tttccaacca ttctgaggga acctttgggc gcctccgtta ccttttagga
     1981 ggcgaccgcc ccagtcaaac tgcccgtcag acactgtctc cgatagggat aacctatccg
     2041 ggttagagta gccataacac aagg
//
LOCUS       DASFQD010000184         2051 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.187, whole genome shotgun sequence.
ACCESSION   DASFQD010000184 DASFQD010000000
VERSION     DASFQD010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 2051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2051
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.187"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            209..580
                     /locus_tag="U1021_002186"
     CDS             209..580
                     /locus_tag="U1021_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712655.1"
                     /translation="MKKLMYTLLVLAYVTVAYLSVYVLPHYYFGAIIGAAGASLGASF
                     KQFKEVKAFPDKALLAYFKRDKKKTSSLLLLLLGIFLFVSLVLEFNWQYGLAFVVAIS
                     YAMLWNVLHIQFLRKYYFKNA"
     gene            complement(602..1939)
                     /locus_tag="U1021_002187"
     CDS             complement(602..1939)
                     /locus_tag="U1021_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM4712656.1"
                     /translation="MNDLTKGKPIAVILQFAIPLLIGSFFQLAYNFADSMIVGHTLGK
                     DSFASVGSTASLIFLIIGFAQGVTNGLTIISAQRFGAGDLEGLKKSFVHGLFYASLIS
                     LLLTVSALAFLKPILVLMQTPVSIIDHSHAFLTAMFGGLTFTIFYNFLSSALRSLGNS
                     KTPLLALVIACFINIGLDFFFILVMNWGVFGAGFATILAQACSVLFLIFYIIHKVPHY
                     HIGLADLKLDRGNLKKHAQLAFPMGFQASIIAIGAMTLQFMVNQLGTDAIAAQAIALR
                     TDQLAMLPMVNLGLAIATFTAQNYGAKLYDRIREGVRYSLLLSITWAIVFAVILILGN
                     RFFSGLFLPNASQTVLDLALVYYIINGSCYWIVASLFILRSFIQGLGKGFIPTLAGFG
                     ELIFRAAVAIIGMQYFGFYGTAAANPAAWIGSIIVLIPSSIIFMKKLKAGQSI"
BASE COUNT          649 a          372 c          488 g          542 t
ORIGIN      
        1 atagcaaagc cttgaaaaaa tctctggctc aggctaaaaa aatgctgccc aacagcccac
       61 ttttggttga tgagcaggat tattatagca agctcttgac agaagttgag ttagaaagtc
      121 aattgccata gtagattatt ttgacttgtg tttgcgataa aatttatgtt aaaataggga
      181 cggagacaaa tagataggga ggttggtcat gaaaaaactg atgtatacct tgttggtgct
      241 tgcctatgtt acggtcgctt atttgtcggt ctatgtcctt ccacactatt attttggtgc
      301 aattatagga gcggcaggag caagtcttgg tgctagtttc aaacagttca aggaagtgaa
      361 agcttttcct gataaagcct tattggctta ttttaagagg gataagaaaa agactagtag
      421 tttattattg ctccttctgg gaatattcct ttttgttagc cttgtgttgg aatttaattg
      481 gcaatatggc ttagcttttg tagtggcgat cagctatgct atgctttgga atgtccttca
      541 tatccaattc ttacgaaaat attattttaa aaacgcatga gagtttcatg cgttttcttt
      601 tctaaatact ttgtccagct tttaattttt tcataaagat gatggaactt ggaatcagga
      661 cgatgatgct tccgatccag gcggcggggt tagcggcggc ggttccataa aaaccgaaat
      721 actgcatgcc gatgatggcg actgctgctc ggaaaatcaa ttctccaaag cctgctagtg
      781 ttgggataaa gcccttgcca agtccctgaa taaagctacg aagaataaag agggaagcaa
      841 caatccagta acaagagccg ttaatgatgt agtaaacaag agccaagtcc agcactgttt
      901 ggctggcatt tggcagaaag agaccagaga agaagcgatt gcccaagatg agaatgaccg
      961 caaatacaat ggcccaagta atgctgagga gtaatgagta gcgcactcct tctcgaatac
     1021 ggtcatagag cttggcaccg tagttctgag cagtaaaggt tgcgatagcc aagcccagat
     1081 tgaccatggg cagcatagcc aactggtcag tacgaagggc aatggcctgg gcggcgatgg
     1141 cgtctgttcc tagttggttg accataaact gcaaggtcat ggctccgatg gcgataatac
     1201 tggcttgaaa tcccattgga aaagcaagct gggcatgttt cttgagatta cctctatcca
     1261 attttaaatc agctagtccg atatgatagt gaggtacctt gtggataatg taaaaaataa
     1321 gaaagaggac cgaacaggct tgagcaagga tagttgcaaa gccagctccg aaaacgcccc
     1381 agttcataac taagataaag aaaaaatcca gaccgatatt gataaaacaa gcgataacta
     1441 gagccagtag aggtgtttta gagtttccga gactgcgtag ggctgaagaa agaaaattat
     1501 agaaaatagt aaaggtcaat cctccaaaca tggccgttag aaaggcatgg gagtggtcga
     1561 tgatactcac aggcgtttgc attaagacca agataggttt caaaaaagct aaggctgaga
     1621 ctgttagtaa aaggctgatg agggaagcgt agaagagtcc gtggacaaaa gattttttaa
     1681 gcccctctaa gtcgccagct ccaaagcgtt gggcagaaat aatggttaat ccattggtaa
     1741 caccttgggc aaaaccgatg attaaaaaaa tcaggctggc tgtcgaaccg acactggcaa
     1801 aggaatcctt tcccaaagta tgccccacaa tcatggaatc agcaaaatta taggccagtt
     1861 gaaaaaaaga gccaatcaat aagggaatag cgaattgtaa gatgaccgca atcggctttc
     1921 ctttggttaa atcattcata acgtctcctt ttgacagatg ataagcccac tagataaatg
     1981 atagtctagt aggctttcta gggataaaat atttctcctg aaaacggagt atagggcgta
     2041 aatttgttat t
//
LOCUS       DASFQD010000185         1756 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.188, whole genome shotgun sequence.
ACCESSION   DASFQD010000185 DASFQD010000000
VERSION     DASFQD010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.188"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(50..1627)
                     /locus_tag="U1021_002188"
     CDS             complement(50..1627)
                     /locus_tag="U1021_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712657.1"
                     /translation="MKKRNFWLTLTCIFAVALLNVGFLYQYRYIIDAIAAGDRQAFVS
                     YFVLMGLTILVMLVFEYIRQIANVSYLNQVGFQLQATFLGKIFDLPFRQFVDQGAGAY
                     ISQLNNDLETVKEDYYDAFFTIFQGACTFGIASLALLSLDGLTAIFLILISFLPVVIP
                     YLFKKRRRLNQEAISDSQQVYNTRVSDVFLSYLQVKNSHQRQQVLDGLNDRYQAVNDK
                     VNQATRTTVTMRLLVGFVFYLTTLSIIFIGGFQVFSGALTIGGLTAILTISEQLVDPI
                     NSIAAAFLDRHAVKKLKQEFELSTFGQETKGQELASAFQSIQLVKASYAVGEKQVFED
                     LTVAFERGKKYLILGESGSGKSSLALILTKNSQLQAGDIYVDKTSLSDLSYQAIQDKI
                     AYLPQEGSLFHDTVLYNLTMGREIPEDRLMFLIKTMNLDSRFPSYASLSEEISDDSGL
                     SGGQKQRLLLIRALLQDKDILLLDESLSALDQETYAVIENYLTSLADKTLIHISHRMS
                     EEVLSRYDGVVRIGESN"
BASE COUNT          556 a          404 c          339 g          457 t
ORIGIN      
        1 cactcatcaa atcaagtcaa caatgtctga ttttgatttt cgaagaatat taattgctct
       61 ccccaatccg taccacccca tcataacggc taaggacctc ctcggacatg cggtgggaaa
      121 tatgaatgag cgtcttatca gctagtgagg taaggtaatt ttcaatcact gcataggttt
      181 cctgatccaa ggcagacaga ctttcatcca gcaacaagat atccttatct tgcagcaagg
      241 cacggatcaa gagcaggcgt tgcttttgtc cgccagacag tccgctatca tcactaattt
      301 cctcgctcaa agaagcataa cttgggaaac gactgtcaag gttcatggtc ttaatgagaa
      361 acatcagcct atcttctgga atctcccgtc ccatggtcaa gttgtataga accgtatcat
      421 ggaaaaggga tccctcttgt ggcagatagg caatcttgtc ttgaatggct tggtaggata
      481 agtctgaaag agaggtttta tcaacgtaaa tatcccctgc ttgcagttgg ctattcttgg
      541 tcaaaataag agccaaggaa gatttgccag aaccactttc cccaagaatt aaatacttct
      601 tgccacgctc aaacgctacg gtcaggtctt caaagacctg tttttcaccg acagcataac
      661 tagccttgac cagttgaata ctctggaaag ctgaagctag ttcctgtccc ttcgtttctt
      721 gaccaaaagt agatagctca aactcttgct ttaatttctt aacggcatgc ctgtccaaaa
      781 aggctgccgc aatgctatta atgggatcca ccaactgctc tgaaatggtc agaatagctg
      841 tcaagccacc gatggtcaag gcaccagaaa agacttgaaa accaccgata aagataatcg
      901 aaagagtggt cagataaaag acaaaaccga ctaagagccg catggttact gtcgttcgag
      961 tggcctgatt gaccttgtca ttgactgctt gatagcgatc gttcagacca tctaaaactt
     1021 gctgtctttg gtggctattt ttcacttgca aataactcag aaagacatct gaaactcttg
     1081 tattatagac ctgctgactg tccgaaatcg cttcttgatt gagccttctc cgctttttaa
     1141 acaaataggg aatcacaacc ggcaagaatg agatcagaat caagaaaata gcggtcagac
     1201 catccaagct aagcaaggcc aaactggcaa tgccaaaggt acaagcacct tgaaaaatcg
     1261 taaagaaagc gtcgtagtag tcttctttca ccgtctccaa atcattattg agctgggaaa
     1321 tataggcccc tgccccctgg tcaacaaact gcctaaaagg taaatcaaaa attttcccaa
     1381 gaaaggtcgc ctgcaattgg aaacctactt gattgagata gctgacattg gcaatctgac
     1441 gaatgtattc aaaaaccagc atgacaagga tagttagccc catcagcaca aaataggaca
     1501 caaaggcctg tctatctcca gctgcaatag catcaataat atagcgatat tggtacagaa
     1561 agccaacatt gagcagggct actgcaaaaa tacaagttaa ggttagccaa aaattcctct
     1621 ttttcatttc tcctccactg tttgatagat ttctaagcaa agcaataaaa aaatctgcat
     1681 taaacacctt tattatacca ctccttccca tatttgtgtc cattttcaca taaagaaaaa
     1741 gaagctaggc ataaag
//
LOCUS       DASFQD010000186         1742 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.189, whole genome shotgun sequence.
ACCESSION   DASFQD010000186 DASFQD010000000
VERSION     DASFQD010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1742)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1742)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.189"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..415
                     /locus_tag="U1021_002189"
     CDS             <1..415
                     /locus_tag="U1021_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEM4712658.1"
                     /translation="GYRAKGEPKSVLFVNLAELIKKIKEGWNYGQGAKLTEFEAVELL
                     KSVDYLILDDLGAKNAIIKPKSDWEQDLLFDILNSRENTIINTNLSGSELKTVYNERN
                     YSRILKGLEGNSFKSFTIKDKRYSINRLKQEEQTP"
     gene            412..852
                     /locus_tag="U1021_002190"
     CDS             412..852
                     /locus_tag="U1021_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000572369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712659.1"
                     /translation="MTEQEFFEQAEKELEELNQRRANYMADDTPVEVADIPKLLKIGA
                     MLRNEDTSLNAYELYKHPEARAKLFAQITEACYMVIGQTPSQSEKLNFGQYLEGQFQA
                     IVKKMIGQTNTQALGELVAALDLDDKLASQFIRDIAVSGLLAKD"
     gene            1175..1582
                     /locus_tag="U1021_002191"
     CDS             1175..1582
                     /locus_tag="U1021_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArpU family transcriptional regulator"
                     /protein_id="HEM4712660.1"
                     /translation="MIDEKKTIAITKRYLKQYPRLKTIARTTTTLQSNWNVSDKVKSG
                     TTRNTQEDRLLNAIAVSQEVEEIERAISNLDKLHCDILTEKYIKRQKSDYGIHQDMNI
                     SESCFYKTLRTALVDFACIFKNGELLQYKDSQS"
BASE COUNT          643 a          314 c          371 g          414 t
ORIGIN      
        1 gggctacagg gccaagggag agcctaaaag cgtgctcttt gtaaacctgg cggagcttat
       61 aaaaaaaatc aaagaaggct ggaactacgg acaaggggca aaactgacag aatttgaggc
      121 agtggagttg ttgaagtcag tcgattatct aattttagat gatctagggg caaaaaatgc
      181 gattattaaa cccaagagcg actgggaaca agatctactt tttgatattt tgaatagtcg
      241 tgagaataca atcatcaaca ctaatctaag tgggtcagag ttgaagacag tttacaacga
      301 gcggaactat agccggattt tgaaaggctt agaaggtaat tccttcaagt cgttcacaat
      361 taaggataaa cgctactcaa tcaacagact aaaacaagag gaacaaacac catgaccgaa
      421 caagaatttt ttgagcaggc agaaaaagag ctggaggaat taaaccagcg ccgtgctaac
      481 tatatggcag atgatacgcc tgtagaagtt gccgacatcc caaaattgct aaaaattggt
      541 gcgatgctac ggaatgaaga tactagctta aacgcctatg aactatataa gcacccagag
      601 gccagagcta agttatttgc acagattaca gaggcctgct atatggttat tggtcaaact
      661 ccaagccaat ccgagaaact gaactttggg cagtacctag agggacaatt tcaggcaata
      721 gtgaaaaaga tgattggtca gaccaataca caggccttgg gcgagctagt ggcagcctta
      781 gacttagacg ataagctggc aagccaattt atccgagata ttgcagtcag tggactatta
      841 gccaaagatt gagaatgaga ggccccgcct ctttttgttg tttaacttac ctcagaaaac
      901 ctcagataaa aacagatata agatactaca aaatactaca atcaaatcta tataggcaat
      961 actaagaaaa actaagtttg aaatagctat agagttgaag tactttggca atttctaaaa
     1021 cgacgaatag atgaacgtat ggtggcgcgt gattgaacag agagcgaaca aagagaaaat
     1081 acaaaaaagc cagcacactt gtactgactg tgagtaaaaa cctaaaacta ttatatcaca
     1141 gttggaggac gctagcttga tttttttaga tacgatgata gacgagaaga aaacaatagc
     1201 aatcactaaa cggtatttaa aacaatatcc acgattgaaa accatagcac gcactaccac
     1261 cactttacaa agcaattgga atgtatcgga caaggtaaaa tcaggaacga cccgaaacac
     1321 gcaagaagat agattgctga acgctatcgc agtgagtcag gaagtggaag aaatagagcg
     1381 agctatctca aacttggata agttacactg tgacatactt acagaaaagt atatcaagcg
     1441 acagaaatcc gattacggta tacaccaaga tatgaacata agtgagtcat gtttttacaa
     1501 aacattacga acagctttgg tagactttgc ttgtatattt aagaatgggg aattattgca
     1561 gtataaagac agtcagagct aaaattcgta aataccccca actttttaaa acgggggtgg
     1621 gtttgttcgt gattaaacaa cgccgcccct ttccgtgcac aattttccct ttttgaaatt
     1681 tttagataca gtaaaacaca gtaggaaaca gtaaaaacat gatataatac acttacagca
     1741 at
//
LOCUS       DASFQD010000187         1732 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.190, whole genome shotgun sequence.
ACCESSION   DASFQD010000187 DASFQD010000000
VERSION     DASFQD010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.190"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            73..273
                     /locus_tag="U1021_002192"
                     /pseudo
     CDS             73..273
                     /locus_tag="U1021_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010921814.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(660..1686)
                     /locus_tag="U1021_002193"
                     /pseudo
     CDS             complement(660..1686)
                     /locus_tag="U1021_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611577.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
BASE COUNT          546 a          319 c          328 g          539 t
ORIGIN      
        1 tgaagacctt ggtgatgggc gtagtaaaac agtctgggaa tagactgttt cagcctgagc
       61 ctagaaacga aaaagcgaag gtggctgttt tctcagagct ttgagggagc caagtcaaca
      121 gctatcattc tgagtctttt ggaaacagcc aagagaaacg gacttgatgc agagaaatat
      181 atgacctatc ttctagaaca cttacctaac gaggagacgc tcgcaaaaaa agaggtgcta
      241 gaggcctatt tgccgtggga taaaaaaaat taagagagca tgtaaataga aaagggttcc
      301 agagtcgaca ggactttgga gcctttttca atataccttg ttattgggcg gttacgaaga
      361 attgatactc atttaaaatc aaaattagct atctactaat caaattgaat atagagaatt
      421 ttaaatttga agttttcgaa aagagaatgg ctagtcaaaa tctatgattt ccaatctgaa
      481 cttagatatt gaaattttac acatagaaat tgatatcaat atgctatagt tgagtgaatt
      541 agaaacagga catatctaag tttgtcaatt tgagaactcc aaagttattt ttaggagtgg
      601 gttattaaca ctataactta aaattgtcct ttttctaatt caaaccacta taatactcat
      661 taaaaatcaa aaagcctact tgtccattct ctatggacaa tcgacttcaa atcagaccaa
      721 tgcaagccct gaatagttgt ttgaagctga tcaatcactg attctaatgt cttaaaaacc
      781 ctatttttaa atcctcgttt ccgaatttct gcccaaactt gctcaatagg attcatttca
      841 ggagtgtaag gtgggatgaa agtaaacccg atattatgcg ggatttctaa tgcttgtgct
      901 ttatgccaga cagcattatc cataatcaat aaaagataat cgttgggata agctaaggat
      961 agctggcgaa gaaactcatt catccactca gtattacagc cccctgctat cagaaaaaat
     1021 gattctcctg tacgagcatc tactgcgcca taacaatatc ggaattcacg gatatgatga
     1081 ctcggaacag acggtctagt cccctttggt gtccaacact tcccttgctt actaattctt
     1141 ccgaaaccag cctcatctta gaacatcaat cgtactttat taaagcgctt tcttatcttc
     1201 ttgaatatag attttatttt tagacgctaa aatcatattt gcgtctgctt ttttaggatg
     1261 ttccgggcga ggagtcacct tgtgccagcc atgacgagcc aaaagagagt aaaaccctac
     1321 gcgagtggtg gtttgtccaa ccagtttctg ataagcctga tagagagttg cgatcgtgac
     1381 atattcacca gtcagcgctc tttctaattg atctttcaga aatgcagttt cctcttcaaa
     1441 cgacagataa gcaggatgcc taccacctcg tttttcttgg aggagtatgt cgagaccatg
     1501 ttctttaaac ttcgctagac ttcgttgaat cgtactgatg ttacagtcta gcaattcaga
     1561 aatctctttg taggtcattc cttttgaacg gaataagata atttgaagcc gtttatggaa
     1621 tttagaaaac gaagaatctt ttaaaagttt tttgagttgt tgttcatctt tattggttaa
     1681 tttcataaca ccattatact atgcttttta atttttatcg agtataagag ag
//
LOCUS       DASFQD010000188         1716 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.191, whole genome shotgun sequence.
ACCESSION   DASFQD010000188 DASFQD010000000
VERSION     DASFQD010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.191"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(137..1414)
                     /locus_tag="U1021_002194"
     CDS             complement(137..1414)
                     /locus_tag="U1021_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HEM4712661.1"
                     /translation="MSTKANLLFDVHEKPAPLQGILLSFQHVFAMFGATILVPLILGM
                     PVSVALFASGVGTLIYQVATQFKVPVYLGSSFAYISAMALAIKEMGGDVSAAQTGILF
                     VGLIYVLIAALVKVIGTKWIDSLLPPIVIGPMIIVIGLGLANSAVTSAGFVADGDWKN
                     VVVAIATFLIAAFVNTKGKGFAKIVPFLIAIIGGYVIAIFLGLVNFTPVLEAAWFELP
                     GFYLPFETGAFKSYNFYFGPEMIAILPIAVVTVAEHIGDHTVLSQICGRQFLKDPGLS
                     RTLIGDGVATAVSAFIGGPANTTYGENTGVIGMTRIASVSVIRNAALIAIAFSFLGKF
                     TALISTIPSAVLGGMSILLYGVIASNGLKVLIESRVDFGQVRNLIIASSMLVLGLGGA
                     VLNIGAITLSGTALSAIVGIILNLILPKAEKAE"
BASE COUNT          539 a          402 c          362 g          413 t
ORIGIN      
        1 aataaactta ggaaatatga caggagaatt aaacaactaa acctttcaca ctcctcgaaa
       61 actaattatt tcaccccaat ctcctctaca ccatcaaaaa aagccagccg gggctgactt
      121 gctgttattt tcaattttac tcagcctttt ctgcttttgg caagataaga ttgaggataa
      181 tacctacaat ggctgagagg gctgtacctg aaagggtgat ggcaccgatg ttgagaactg
      241 ctccaccaag gcccaatacc agcattgagc ttgcaataat caggttgcga acttgaccaa
      301 agtcaacacg gctttcaatc aaaactttca aaccgtttga ggcgataaca ccgtaaagta
      361 agatagacat accaccaaga acggcacttg gaatagttga gataagggct gtaaatttac
      421 ccaagaatga gaaggcaatg gcaatcaagg ctgcattgcg gataacggat actgatgcga
      481 tgcgagtcat accgataacc cctgtatttt caccgtaggt cgtattggct ggtccaccga
      541 taaaggcaga tacagcagtc gctacaccat ctccaatcaa ggtacggctg aggcctggat
      601 ctttcaagaa ctggcggccg cagatttggc tgagaacggt gtggtcaccg atatgctcag
      661 ctactgttac aacagcaatt ggtaagatag caatcatttc tggaccgaag tagaaattgt
      721 acgacttgaa ggcacctgtt tcaaatggta ggtagaaacc tggtaattca aaccaagccg
      781 cttccagaac gggtgtaaag ttaaccaggc caaggaagat ggcaatcaca taaccaccga
      841 taatggcaat caagaaagga acaatcttgg cgaagccttt ccctttggta ttgacaaaag
      901 ccgcaatcaa gaaggtcgca atcgccacga cgacgttttt ccagtcgccg tctgcgacga
      961 agcctgctga agtcacggca gagttggcaa gacccagacc gatgacgata atcattggac
     1021 cgatgacaat cggtggcaag aggctgtcaa tccacttagt accgataact ttgacaagtg
     1081 cagcgatcaa cacgtaaatc aagccgacga agagaatacc agtctgagct gccgacacat
     1141 caccacccat ttccttgata gcaagcgcca tagcagaaat gtaggcaaag gatgaaccca
     1201 ggtaaactgg aactttaaac tgggttgcca cttgataaat caaggtccca acacctgatg
     1261 cgaagagggc aaccgataca ggcataccga gaatcagtgg caccaaaatc gtcgcaccaa
     1321 acatagcgaa cacgtgctgg aaactcaaca aaatcccttg aagcggtgct ggtttctcat
     1381 ggacatcaaa caaaagattg gcttttgtac tcataaatct cccattctgg gtacacaaaa
     1441 agacccagac tttctaaata tacatagtca taggccctta atgaattatc ctgttgtctt
     1501 tctcacctca cgggatgagt ttaaaaacct acgcttttgg tattgtaaca taagccctta
     1561 cttttggcaa ggaattttgt aaatttttat tttttaggaa aatggcagag caggaagctg
     1621 aactgcttat tattactcca tttcttcttc caactctttt tccacacgcg ctaactttaa
     1681 acgaagattt ttcatgccat agccatcctc ctttcg
//
LOCUS       DASFQD010000189         1679 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.192, whole genome shotgun sequence.
ACCESSION   DASFQD010000189 DASFQD010000000
VERSION     DASFQD010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1679)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1679)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1679
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.192"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(33..1367)
                     /locus_tag="U1021_002195"
     CDS             complement(33..1367)
                     /locus_tag="U1021_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009909199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEM4712662.1"
                     /translation="MLELFKAINNLVWGPPLLLLLVGTGVYFTLRLGIFQISKLPTAF
                     RLIFSSDQSGQGDVSSFAALCTALAATVGTGNIVGVATAITTGGPGALFWMWVAAFFG
                     MATKYAEGFLAIKYRTKDANGQAAGGPMHYITLGMGQKWKPLAVFFAISGVLVALLGI
                     GTFSQVNSITASLETSFGLEPPLVSVITAISIVFVVFGGIEKISDVSTKIVPFMAILY
                     ILASITVLAVHWDQLLPTLALVFKSAFTPAAAVGGFAGATVQQAIQRGIARGVFSNES
                     GLGSAPIAAAAAKSDNPVEQGLISMTGTFIDTLIICTLTGFTILVTDQWSVEGLAGAP
                     LTQAAFSTVFGQPGVLALTISLVLFAYTTILGWSYYGERCIEFLFGTKAILPYRLVFV
                     AMVALGGFLKLDLIWTIADIVNGLMALPNLIALLALSPVIIKETRQYFAKKK"
     regulatory      complement(1474..1578)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
BASE COUNT          545 a          411 c          332 g          391 t
ORIGIN      
        1 acaaaaagac agccaagtgg ctgactttta tcttatttct tctttgcaaa atactggcgt
       61 gtctccttga tgataacagg agagagagct agtaaggcga tcaagtttgg tagggccatg
      121 agaccattta caatatcggc aatggtccaa atcaagtcta gtttgaggaa accacccaag
      181 gcaaccatag ctacaaagac cagacggtaa ggtaagatgg ctttggttcc aaatagaaac
      241 tcaatacagc gttcaccata ataagaccaa cccagaatag ttgtataggc aaaaagaact
      301 agactgatgg ttaaggccaa gacacctggc tgtccaaata ctgtcgaaaa ggctgcctga
      361 gtaagaggag cacctgccaa gccctctacc gaccactggt cagttactag aatcgtaaaa
      421 cccgttaagg tacagatgat aagtgtatca ataaaggtac ccgtcataga aatcaagccc
      481 tgttcaactg gattatcaga cttggcagcc gcagcagcaa taggcgccga acccaaacca
      541 gattcatttg agaaaacccc acgcgcaatc ccacgctgaa ttgcttgttg cacagtcgca
      601 cctgcaaaac cgcccacagc cgctgctgga gtaaaggcag atttgaaaac taaggccagg
      661 gttggcaaga gttgatccca atgcacggcc aagacagtaa tacttgctaa gatatacaaa
      721 atcgccatga aaggaacgat tttggttgaa acatccgaga ttttttcaat cccaccaaaa
      781 acaacgaaga caattgaaat agccgttatt acactgacaa gtggcggttc caatccaaaa
      841 ctcgtttcca aagaagcagt gatggaatta acttgcgaaa aagttccaat ccccaagaga
      901 gctactaata cacctgaaat agcaaagaaa actgccaagg gcttccactt ctgtcccatc
      961 cccaaggtga tatagtgcat aggtccacca gctgcttgac cgtttgcatc cttggtacgg
     1021 tatttaatgg ctaaaaatcc ttccgcatac ttggttgcca ttccgaaaaa ggccgcaacc
     1081 cacatccaga aaagagcccc aggaccacct gtagtaatag ctgtcgcaac tccgacaata
     1141 tttcctgtac caactgtcgc tgccaaagct gtacaaaggg ccgcaaagct ggacacatct
     1201 ccctgaccag actggtcact ggagaaaatc agacgaaaag ccgtcggcaa tttactgatt
     1261 tgaaagattc ccaaccgtag ggtaaaatag acacccgttc cgaccaatag taacaagagg
     1321 ggcggtcccc aaacaagatt gttgatagcc ttaaatagtt ctaacatagt tcctcctaag
     1381 cgtttctaac ccgataaagc tgccggaaaa acaaaaagag gcttaacact tcaacctcta
     1441 gaatcaacgt gaaaaataca gaaaaagcct atttttcaac gctctgtcct tttacctgag
     1501 agtttcagta gctctacttt tccaagcagg actaccttgc cccttcggtg ccaaaatggt
     1561 ctctccagag ttccgtccat tgaacagtca gtttcccttc tacccaatat caaccggtta
     1621 ttcagtttta tctagtttta ttttaatcta atttcacgaa aaaatcaaga atattttct
//
LOCUS       DASFQD010000190         1665 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.193, whole genome shotgun sequence.
ACCESSION   DASFQD010000190 DASFQD010000000
VERSION     DASFQD010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.193"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            450..>1665
                     /locus_tag="U1021_002196"
     CDS             450..>1665
                     /locus_tag="U1021_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012677188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HEM4712663.1"
                     /translation="MGIKDKNIKILFILKHQTHLEIRAKLDYDSPGCPHCQGKCIKYD
                     FQKSSKIPILDCQGFPTLLLLKKRRFQCKSCQKVTVAETALVKKNCQISLPIWEKVTQ
                     LHTENMTNIAIARRLHISVSVVQRKLAQFQLEHDFTKLPKVLSWDEFSRNKGKLAFIA
                     QNFETRSIVTILDNNRQSTIKNYFYKYPRAVRETVEVVTVDMSGSYIPIIKKLFPRAK
                     IVLDRFHIIQYLSRAMMTTRIDIMKTFDTRSLPYRSMKNHWRILQKDSRKLSLNRFFS
                     RTFGQTVTPREVVQKTLNFSEELKFYYELYQILLFHFQEMNSKYFFELLEDNLDLVNP
                     AFKTVFKTFLKYKTYITNAMELPYSNAKLESTNKLIKDIKRQAFGFRNFKTKIYIVLN
                     IKNERTNFVLSRC"
BASE COUNT          558 a          346 c          314 g          447 t
ORIGIN      
        1 tgttctccca aagttttgag ggagccaagt cgacaactat cattttgagt cttttgaaaa
       61 cggccaagag gcacgaactt gatacagaga aatatatgac ctatcttcta gacaatctac
      121 ctaacgagga aacactcgct aaaaaggtgg ttctagaggc ttatttacca tgggctgaaa
      181 gaattcagaa taagtgcaaa tagaaaaaaa gttccggagt caagcagact gtggaacgtt
      241 tttcggctct ataatttctg tagtgggtaa atccactgta gagattatgg agcctttttg
      301 aatatataca aaaagtccca tataacctat aatgaaaagc aaccacactc acattagaaa
      361 gactcatatg gaataaatcc agagtcaggg aagtgactct ggattcctga gcctagaaat
      421 aaaaaagcga agatcatacc acagaactaa ttggaatcaa agacaaaaac atcaaaattc
      481 tcttcatttt gaaacatcag acccatctag aaatcagggc aaagctagat tacgacagcc
      541 ctggttgtcc tcattgccaa ggaaagtgta tcaagtacga ctttcaaaag tcgtcaaaga
      601 ttccgatttt ggattgtcag ggctttccga ccctcctctt gcttaagaaa cggcggtttc
      661 aatgcaaatc ttgccaaaaa gtgactgtag ctgagacagc tctagtcaag aaaaactgtc
      721 agatttccct acctatttgg gagaaagtga cacaactcca tacagaaaac atgaccaata
      781 tagccatcgc taggagatta catatctccg tatcggtcgt ccagaggaaa ctggctcagt
      841 ttcaattgga gcatgatttt acgaaattac caaaagtctt gagctgggat gaatttagtc
      901 ggaacaaggg aaaactcgcc tttattgctc agaattttga gacgagatcg attgtgacca
      961 ttcttgacaa caaccgccaa agcaccatca agaactattt ctacaagtat cctagggcgg
     1021 tcagagaaac tgtcgaggtc gtaacagtgg acatgtcggg tagctatatt cccatcatca
     1081 aaaaactatt tccaagagct aaaattgtcc ttgatagatt tcacattatc caatacctga
     1141 gccgtgctat gatgacgact agaattgata ttatgaagac tttcgatacg cgttccctac
     1201 cttatcgatc catgaaaaat cactggcgta ttctccaaaa agatagtcga aaactgtctc
     1261 tgaatcgctt cttttctcgc acttttgggc aaacagtaac accgagagag gttgtccaga
     1321 agacattgaa tttctctgag gaactgaaat tctattacga actctatcag atccttctct
     1381 tccatttcca agagatgaac tcgaaatatt tcttcgagct tctagaagac aatctggatc
     1441 ttgtcaatcc tgcctttaaa actgttttta aaacttttct aaagtataaa acgtacatca
     1501 cgaacgccat ggagcttcca tattccaacg ctaagctgga atcgaccaat aaactcatca
     1561 aagacatcaa gaggcaagcg ttcggcttta ggaactttaa aaccaagata tatattgttt
     1621 taaacatcaa aaatgagaga acgaatttcg tcctctctag gtgtt
//
LOCUS       DASFQD010000191         1609 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.194, whole genome shotgun sequence.
ACCESSION   DASFQD010000191 DASFQD010000000
VERSION     DASFQD010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.194"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(44..580)
                     /locus_tag="U1021_002197"
     CDS             complement(44..580)
                     /locus_tag="U1021_002197"
                     /inference="COORDINATES: protein motif:HMM:NF013677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEM4712664.1"
                     /translation="MKLSYEDKIKIYELRQSGQSIKNLSNQFTISESVIQYMLRLIDR
                     YGINIVKKGKNTYYPPELKQEMIDKVLIEGLSLNQVALDYALPNRGTLPNWIAQYKKN
                     GYTILEKTRGRPPKMGRKPKKTWEEMTELERLQEENERLRTENVYLKKLRALRLRDEA
                     REQERLKQLERWSQKDFD"
     gene            complement(653..1476)
                     /locus_tag="U1021_002198"
                     /pseudo
     CDS             complement(653..1476)
                     /locus_tag="U1021_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009659387.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
BASE COUNT          497 a          368 c          279 g          465 t
ORIGIN      
        1 tgataggtag aaggaactaa ttgagcaatc gtcagtagta catctagtcg aaatccttct
       61 gcgaccatct ctctaactgt ttgagccttt cttgttctct ggcttcgtcc cttaaacgaa
      121 gcgctctcaa cttttttaga tagacattct ccgttctaag ccgttcattt tcctcctgaa
      181 gtcgctctaa ctccgtcatc tcttcccagg ttttctttgg tttacgcccc atctttggtg
      241 gcctccctct tgttttctca agaatagtat acccgttttt cttgtattgt gctatccagt
      301 ttgggagagt tcctcggttt ggcaaggcgt aatcaagagc tacttgatta agggacagac
      361 cttcaattag aactttatca atcatttcct gcttgagttc tggaggataa taagtgttct
      421 tacctttctt gacaatgttt attccatacc tatcaatcaa tcgaagcata tattggataa
      481 cagattctga aatagtaaat tggtttgaca agttcttgat agactgacca ctttgacgta
      541 gttcatagat tttgattttg tcttcatagc tcaatttcat aaaaatagca ccccaaaagt
      601 tagatttttc tgtctaactt ttggggtgcg gttcacaaca gactttaaca aattatccta
      661 gagcaacatc caaaatcatc atgatgataa aaccagccat taagcccaga gttgcaatat
      721 ccgtattgcc gtttgtctgc gattctggaa tgagctcttc tacaacgaca aaaatcatgg
      781 ctcctgccgc aaaggagagg gcataaggta aaataggtgt cataaaggtg accgcaaaag
      841 ccccgatgac tgctgcaatc ggctcgacaa ttgctgacat tgatccccag taaaaagctt
      901 tccacctaga tgcgccgtct gtacgaattg gaatagctaa ggctgcacct tcaggaatat
      961 tttgataccg atcccaatag caagaccgat tgcgccgata aaagctgctg gactatagtt
     1021 agaagctagt gcaccaaatg tcacaccgac cgccaagcct tcaggaatat tgtgaattgt
     1081 aatagctaag aagagcaggg ctgttttgga tagatttttt ctatccttct caccaccacc
     1141 ttctgcctta tctttatcat ttcccaaatg caaatgcgga acccaggcat ctaccaagcg
     1201 taaaaaaata ccacctgctg caaaacctac tgccgctggt atccaagcca gattaccgta
     1261 tgaactttca gcatactcaa tcgatggggc taataaagac caaaaagaag ccgcaatcat
     1321 aacaccagct gcaaagccta gcatggtatc tagcaaacga cgactaactg tcttaaagaa
     1381 aaatacaacg gcagacccca taatcgtaca aaaccatgtg aataaaccac ctagcaaagc
     1441 ctgtagaact acagactgat tagtaaccca agtcataact aacatcctat cctgtttaat
     1501 cttgcatatc ctataaagta agatacccta atttattata aaattcaagc tttttcactt
     1561 aaataaataa gaaaatatct aaaaaataaa agacctaaaa ctacattaa
//
LOCUS       DASFQD010000192         1557 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.195, whole genome shotgun sequence.
ACCESSION   DASFQD010000192 DASFQD010000000
VERSION     DASFQD010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.195"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(146..1453)
                     /gene="eno"
                     /locus_tag="U1021_002199"
     CDS             complement(146..1453)
                     /gene="eno"
                     /locus_tag="U1021_002199"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002985288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEM4712665.1"
                     /translation="MSIITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTG
                     EHEAVELRDGDKSRYLGLGTQKAVDNVNNVIADAIIGFDVRDQQAIDRAMIALDGTPN
                     KGKLGANAILGVSIAVARAAADYLEVPLYTYLGGFNTKVLPTPMMNIINGGSHSDAPI
                     AFQEFMILPVGAPSFKEGLRWGAEVFHALKKILKTRGLVTAVGDEGGFAPKFEGTEDG
                     VETIIEAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQI
                     DYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKRVQLVGDDFFVTNTDYLARGIK
                     EGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAG
                     QIKTGSLSRTDRIAKYNQLLRIEDQLGEVAVYKGLNSFYNLKK"
BASE COUNT          446 a          340 c          332 g          439 t
ORIGIN      
        1 tcgcgcaccc gcatagcggg tggtttattt gtcacgcacc ttacggagcg tgacggacta
       61 aaagtcacat aatatgaaga aaagccctta gaaaatcaat tctaaggact ttgtcttcag
      121 tctgaaatta gtacactgta ctaatttatt ttttcaagtt gtagaatgag ttcaagcctt
      181 tgtagactgc aacttcacca agttgatctt cgatacgaag caattggttg tatttagcga
      241 tacggtctgt acgtgacaat gaaccagtct tgatttgacc agcattagtt gcaactgcga
      301 tgtcagcgat tgttgaatct tcagtttcac ctgaacggtg tgatacaacg gcagtgtagc
      361 cagcttcttt agccatttcg atagcttcaa atgtttcagt aagagtaccg atttggttaa
      421 ctttgataag gattgagtta gcagcacctt ctttgatacc acgtgcaagg tagtcagtgt
      481 ttgttacgaa gaagtcgtca ccaaccaatt gaacgcgttt gccaagacgc tcagtaagag
      541 ctttccagcc atcccagtcg ttttcatcca taccatcttc gatagtgatg attgggtatt
      601 tgttaaccaa ttcttcaagg tagtcaattt gttctgcaga agtacgaaca gcagcgcctt
      661 cgccttcgaa tttagtgtag tcgtaaactt tacgctcttt gtcgtagaac tcagatgacg
      721 cacagtcgaa accgatcatg atgccgtttt cgccagcttc gtaaccagca gcttcgatag
      781 cttcgatgat tgtttcaaca ccgtcttcag ttccttcgaa cttaggagcg aatccacctt
      841 cgtcaccaac agctgttacc aaaccacgag ttttcaagat tttcttcaaa gcgtggaata
      901 cttcagcacc ccaacgaaga ccttctttga atgaaggagc gccaactggc aagatcatga
      961 attcttggaa agcgattgga gcgtctgagt gagaaccacc gttgatgatg ttcatcattg
     1021 gagttggcaa tactttagtg ttgaacccac caaggtaagt gtaaagtggc acttcaaggt
     1081 agtcagcagc agcacgcgca acagcgatag aaacaccgag gattgcgttt gcacccaatt
     1141 tacctttgtt aggagtaccg tcaagagcaa tcatagcgcg gtcgatagct tgttgatcac
     1201 gaacgtcaaa accgatgata gcgtcagcaa tcacgttatt tacgttgtca acagcttttt
     1261 gagtaccaag accaaggtaa cgagatttgt caccgtcgcg aagctcaact gcttcgtgct
     1321 caccagtaga agctcctgaa ggaaccatac cacgtccgaa agcacctgat tcagtataaa
     1381 cttcaacttc aagtgtaggg ttaccgcgtg agtcaaggac ttcgcgagcg taaacatcag
     1441 taataattga cattatatta ctctcctttg agtttaaaat agttacatag ctatcatacc
     1501 ctaaaagaag ggatttttca agaaaaaaca ggttatttta ctgaaagaaa taatgtg
//
LOCUS       DASFQD010000193         1549 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.196, whole genome shotgun sequence.
ACCESSION   DASFQD010000193 DASFQD010000000
VERSION     DASFQD010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.196"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..757)
                     /locus_tag="U1021_002200"
     CDS             complement(<1..757)
                     /locus_tag="U1021_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712666.1"
                     /translation="MKTSTLGKLLELPNFHHFYTVPIRENTESSGNYIIVFEQDKQPV
                     FVDLKNETGHTREVRFASHFDSAGLLVGLGAIPINYWPTCQILGVNKNNNRRGLSLSS
                     LMDGYGRLPIFKEMAERYRARGQSTIYDPYRYSYTIDEKKVIKDNQLTLIPKKEYEKI
                     KDFHPFLQTKHGNVYAVPCFYQDRKRNQITKIYIMGWYFYEKQLKISWKPSHSRKSRW
                     RSSLVSVDKLSDRFFFQGELYKKGTYPVFLEDLT"
     gene            complement(877..1549)
                     /locus_tag="U1021_002201"
                     /pseudo
     CDS             complement(877..1549)
                     /locus_tag="U1021_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943206.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          480 a          302 c          281 g          486 t
ORIGIN      
        1 ttgtgagatc ttccaggaac actggatagg ttcctttttt atacaattct ccttgaaaga
       61 agaagcggtc agataattta tcaactgaaa caagagaaga acgccagcgg cttttacgag
      121 agtgagaagg cttccaagat atttttaatt gcttctcata aaagtaccag cccataatat
      181 aaattttagt aatctgattt cgttttctgt cttgatagaa acaaggaact gcataaacat
      241 ttccatgctt tgtttgcaaa aaaggatgga aatcttttat cttttcgtat tctttctttg
      301 gaataagggt taattgatta tccttaataa ccttcttttc atcaatagta tatgaataac
      361 ggtaggggtc ataaatggtt gattgtccac gcgctctata acgctctgcc atttccttaa
      421 aaataggtag acgtccataa ccatccatca gactagatag actaagtcct cgtcgattat
      481 tatttttatt cacaccaaga atctggcagg taggccaata attgatagga atggctccta
      541 atccgaccag aagaccggcg ctgtcaaaat gactggcaaa gcgtacctca cgagtgtgac
      601 cagtctcatt tttcaaatca acaaatacag gttgcttgtc ctgttcaaaa acaattatat
      661 aatttccaga agactccgta ttttctctaa ttggaacggt gtagaagtgg tgaaaatttg
      721 gtaattctag taactttcca agtgttgatg ttttcataac acaagtataa caaaaaatat
      781 ttttcaaatc cacaaagacg tttaatttgt taaacaaaat ataaagaaac tgggaaagac
      841 atccatgacg actttcccac tcccaccgtt tattaaagga taggtgatga ttgtcttatc
      901 taccgaatct tctaaagcct ggcgcgattc ttctgataaa cgcaaatctg caagggtttg
      961 ttctgaaaaa tagtagggat ttagactatc tacaaatgca gaaattgaaa tgacagcttt
     1021 ctccaatatc agggattttt cagtgtaagc aaagggaata gcagaccaat catcactctc
     1081 gaacatttct aaaatatctt tttgaacttg aatttcatcc tcatttttag ctgaaactag
     1141 gattgttttt agtgtagcac gaaaactttc cttgtcttgc accaagtctt ccaaggtcaa
     1201 caagctttca tctgccttct cataaaaaat atctaattcc gtctctgacg aagtagtcac
     1261 acggagccag tcagccttga tactggtttt cattactgca taggcagaag tattttcaaa
     1321 gggactgctg cgcgtttgag gatagagaac aatccactct ttctggaata gattgtcagg
     1381 tttagctatt ttcagttcct cctcagaagc tgtaccaatc cgctggctga tagcagtagt
     1441 gtcatctcgc tgaaagaatc caatgatacg cggattttgc ggaccaccaa tggcatcaat
     1501 ttttgttcct agatcattaa taatgcgtat gttcaaggca tgccactgc
//
LOCUS       DASFQD010000194         1546 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.197, whole genome shotgun sequence.
ACCESSION   DASFQD010000194 DASFQD010000000
VERSION     DASFQD010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.197"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(88..762)
                     /locus_tag="U1021_002202"
     CDS             complement(88..762)
                     /locus_tag="U1021_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004195780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HEM4712667.1"
                     /translation="MSEQFIPSVLSDLRQDIVQMPEVIKECSGIRIYGRRIRSVLFTT
                     DVSIIANHNADAILAVYPFTPSPAIIKSIMLVASVPVLAGVGGGLTTGMRSANMSLLS
                     ESEGAYAVVVNGPTDVKTIEAINKVVDIPIIYTVVSEKSDLTSRIKAGVDILNVSCGM
                     ETPRVVKKIREAFPDFPIIATGGPTEDSIRRVIEAGANAVSYTAPSNGELFKGKMEKY
                     RKHAKD"
     gene            complement(948..1295)
                     /gene="rplS"
                     /locus_tag="U1021_002203"
     CDS             complement(948..1295)
                     /gene="rplS"
                     /locus_tag="U1021_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005590628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEM4712668.1"
                     /translation="MNPLIQSLTEGQLRTDIPSFRPGDTVRVHAKVVEGNRERIQIFE
                     GVVISRKGQGISEMYTVRKISGGVGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLRA
                     LQGKAARIKEIRR"
BASE COUNT          481 a          350 c          265 g          450 t
ORIGIN      
        1 ctaatctcac accgtaaaac gataaaaaac agcaagtttc atctagcaat aaaacttact
       61 gtttgcttag cctatctttt ttatgagcta atcctttgca tgtttgcggt atttttccat
      121 tttcccttta aaaagctccc cattacttgg tgctgtatag gagacagcat tggctccagc
      181 ttcgataacc cgacgaatag agtcctcagt cggaccacca gtcgcaataa ttggaaagtc
      241 agggaaagct tctcgaatct tcttcacaac ccttggcgtt tccataccgc aagaaacatt
      301 tagaatatct actccagctt taatccgtga ggttaaatca gacttttcag aaacaacggt
      361 ataaatgata ggaatatcta ctaccttatt gattgcctca attgttttta catccgttgg
      421 tccatttacc acaacagcgt atgctccctc cgactcagac aagagactca tattagctga
      481 acgcatacct gtcgtcaagc ctccaccaac accagccaag actggaactg acgcaaccaa
      541 cataatactt ttgataatag ctggactggg cgtaaatgga taaacagcca aaatagcatc
      601 tgcattgtga ttggcaataa tagacacatc cgttgtaaat aagactgaac gaatgcgacg
      661 accataaata cgaattccac tacattcctt gataacttct ggcatctgaa caatatcctg
      721 ccgtaaatct gataaaacag atggaataaa ctgttcgctc atccgcaacc tcctctatac
      781 tagctacaat aatatatagt ataacatatt atttcatgga agatacacaa aaacaatcca
      841 ttttaccact gctttcacaa tttggtactt tttcaacaga ttttttaaaa aaagagacag
      901 ctttcgctgc ctcccattct ccgaccaaaa tagtctgtag gactatctta acgacggatt
      961 tctttgatac gtgctgcttt accttgcaat gcacgtaggt agtacaattt agcacgacgt
     1021 actttaccgt aacgtactac ttcaatctta tcaacacgtg gagtgtggat tgggaatgta
     1081 cgttcaacac ctacaccacc agagatttta cgtacagtgt acatttctga gatgccttga
     1141 cctttacgag agataacaac accctcgaaa atctggatac gttcgcggtt accttcgaca
     1201 accttagcgt gaacacgcac agtgtcacca ggacggaatg aagggatgtc agtacgaagt
     1261 tgaccttctg tcaaactttg gatcaatgga ttcattttat tctcctatct ttgtcaatct
     1321 taggtgcttt taaacccagc ggataaactg tatttttgtg cgtccattac acgcagacta
     1381 tattatacac caagtaatca cctatgtaaa gcattttgat aaatttatca tggtcaatca
     1441 caccgcttct tttacaagtt aagtcaacaa ggtctgggtt tgattttcga agagtgttaa
     1501 tgatacagat tcctgttgga gaaaaacgaa aagaggctga gcaaaa
//
LOCUS       DASFQD010000195         1514 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.198, whole genome shotgun sequence.
ACCESSION   DASFQD010000195 DASFQD010000000
VERSION     DASFQD010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.198"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            96..1493
                     /locus_tag="U1021_002204"
     CDS             96..1493
                     /locus_tag="U1021_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEM4712669.1"
                     /translation="MKKVSFWLGINIALLGIMVSLAVWLFAGLQERQVSQFIEEKQQT
                     ILAKGKGKIQEGNIDTTHVVAALPTDDAGHVLGPVESRMISYVQRRFGHKKPAGKIQK
                     LVFISSIEGKTNFKNITAREIQAEHYKVDNLQIKKQDKLPSERVLLTQDNELFTLEDL
                     LPNLSSAASIIVDHLREALLAQGMKETDVEAIVKKFETLDLNAISFSYGDSQLTLQLP
                     DGYGINQLVLPISDLYPVVKSDYLVDADKVGYDEYMAAQVVDKKHLRQVALTFDDGPN
                     PNTTPVVLDLLKKYNAKATFFVVGKAVAGNKAILRRMVAEGHVIANHTWNHPNLVTIS
                     GEQVQREIQDTQAAITEATGIVPTMVRPPYGSVNQAVVNQMGLPSIYWSVDSKDWKSR
                     NPQAILKEIKEQTCPGSIILMHDIHQSTVDSLESVLQYLTGEGYNMVTVTDLLASPLN
                     PQLIYYSQELSGPAQ"
BASE COUNT          493 a          270 c          317 g          434 t
ORIGIN      
        1 acctaatctt tttatgagtt tttatagaac tgtcttgaca agatccttta aatgatttag
       61 catagtttat atatgttttg aatgggaggc tggatatgaa aaaagttagt ttttggttgg
      121 gaatcaacat cgccttgctc ggcataatgg taagtttggc tgtatggtta tttgcaggac
      181 ttcaagaaag acaggttagt cagtttatcg aggaaaaaca acaaaccatc ctcgctaaag
      241 gcaagggcaa aattcaagag ggaaacattg atacgaccca tgttgtggct gccttaccta
      301 cagatgatgc aggtcatgtc ttaggacctg tagaaagtcg aatgatttcc tacgttcaaa
      361 gacgctttgg tcataaaaaa ccagcaggaa aaattcaaaa actggtcttt atttcatcaa
      421 tagagggaaa aacaaatttt aaaaatataa cagctcgtga aattcaagcg gagcactata
      481 aagtagacaa cttgcaaatt aaaaagcagg ataaactccc gtctgagcgt gtgttgttga
      541 cgcaggacaa tgaattgttt accctggaag atttattacc taatttatcc tctgcagcaa
      601 gtattattgt tgatcatcta agagaagctt tacttgctca aggaatgaaa gagactgatg
      661 tagaagcgat tgtcaaaaaa tttgaaacac tagacttaaa tgctatttcc tttagttatg
      721 gagacagcca attaacctta caattaccag atggttacgg catcaaccag ttggttctac
      781 caatttcaga tttgtaccca gtagtgaaga gtgattatct agtagatgct gataaggttg
      841 gctatgatga gtatatggct gcacaagttg tggataagaa acatttgaga caggttgctc
      901 taacctttga tgatggacca aatccgaaca cgacaccggt agttttagat ttactgaaaa
      961 aatataatgc caaagcaact ttctttgttg ttggtaaggc tgtagctggg aataaagcta
     1021 ttctccgtag aatggtagca gaagggcacg tcatcgccaa ccatacgtgg aatcatccca
     1081 atctagtcac tatttctggg gagcaagtac agagagaaat tcaagataca caggcagcta
     1141 ttactgaagc tacaggtatt gtaccaacaa tggttcgccc tccttatggt tcggttaacc
     1201 aggctgttgt caatcagatg ggacttccat cgatttattg gtcggtcgat tctaaagatt
     1261 ggaagagtcg caatccccaa gccattttga aagaaataaa agaacagact tgtccaggaa
     1321 gtattatcct aatgcatgat attcatcagt caacagttga tagcctcgag tctgtattgc
     1381 aatacttaac aggcgagggc tacaatatgg ttactgtaac agacttactc gccagtcctc
     1441 tcaatcctca attaatctat tattcacaag aattatctgg tccagcccag taagaatgat
     1501 aaaaggctta gaat
//
LOCUS       DASFQD010000196         1475 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.199, whole genome shotgun sequence.
ACCESSION   DASFQD010000196 DASFQD010000000
VERSION     DASFQD010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1475)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1475)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.199"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            87..1238
                     /locus_tag="U1021_002205"
     CDS             87..1238
                     /locus_tag="U1021_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family transcriptional regulator"
                     /protein_id="HEM4712670.1"
                     /translation="MITDKYLIREQNEALVLQTIIENKGLSRAQIAKETGLNKASVSS
                     ITTSLIDSGLVEETGIGQSGKTGGRKPIFVNFCGKAGLVIAFDLGYNYISGAISYLDG
                     TIIRQFRERHLLNRENIIDYIEQYSKELLSAAPLTLHDVVGMTLAIHGIVVDNHIRFT
                     PSYDLKDFPLKKELEKRFYFPIYLENEANLSALGEFTFSQSRDNLISISIHSGIGAGI
                     IQDKRLQTGAHGQAGEIGHTILHPKGKACNCGNLGCLEKYASNLVVYQEFSKHYNLKH
                     ANSDLISQYYLCSDSFTQELINQQIYHQAIGINNLIMLCDPQLVIINSSLYAKIPKLL
                     DKLESEINSQFAQKVSLTISNLGDTATLYGGIATAVQQFLHIPDLTFPR"
BASE COUNT          497 a          284 c          258 g          436 t
ORIGIN      
        1 ttcccctttt attccccttt ttcccctttt tgtggcataa taacagtaaa aacatctaga
       61 aataatctcg tcaaaaggaa atgagaatga ttacagataa atacttaatt cgtgaacaaa
      121 atgaagcctt agtgcttcaa actattattg aaaacaaagg cctgtctaga gctcaaattg
      181 ctaaggaaac cggactcaat aaggctagcg tctcgtctat tactacttct ctcatcgata
      241 gtggccttgt ggaagaaaca ggaattggac aatctggtaa gaccggggga cgaaaaccta
      301 tttttgtcaa tttttgtggc aaggctggtc tggtgattgc ctttgacttg ggctataact
      361 acatcagtgg agcaatcagc taccttgacg gcactattat tcgtcaattt agagaacgtc
      421 atctcttaaa cagagaaaat attatcgatt acatcgaaca atacagcaaa gaattactgt
      481 cagcagcgcc actgacccta cacgatgtgg tcggcatgac tctggccatt catgggattg
      541 tggtggataa tcacatccgt ttcacccctt cttatgattt gaaagatttt cctttaaaaa
      601 aagaactgga aaaacggttc tatttcccta tatacttgga aaatgaggct aatctttcgg
      661 cattaggaga atttaccttc tcacaatcca gagacaatct tatcagcatc agtatccata
      721 gcggtatcgg agcaggtatt attcaggata aacgcttgca gactggagct catggacaag
      781 ctggtgaaat tggacatacc attttacacc ccaaaggcaa ggcttgtaat tgtggtaatt
      841 tgggatgctt agagaaatat gcatcaaatc tagtcgtata tcaagaattc tccaaacact
      901 ataaccttaa gcatgctaat tcggacctaa tttctcaata ttatctttgc tcagattcct
      961 tcactcagga actcataaac caacagatct atcatcaagc tattggtatt aataatctca
     1021 tcatgctttg tgatcctcaa ctagtaatta tcaatagctc gctgtatgct aagataccca
     1081 aacttctaga taaattggaa tcagaaatta atagtcaatt tgcacaaaag gtctccttaa
     1141 caatttcgaa cctaggtgat acagcaacac tatatggagg tattgctaca gctgttcaac
     1201 agtttttaca tataccggat ttaacgtttc ctagataaga aacaaaaaaa ctaagtaggt
     1261 tacaccagct aacaaattac agtaaaaaga tttcaatata taatagggtg gaaaattata
     1321 actacgtggt atttaataga gctttatcca ttctatccaa aaatatgagt catgggaaaa
     1381 ctcagatatg cttaaaagcc tgaaattcaa attacaagta gtattttatt ctattgcaca
     1441 aaaacatact aagattagta gtgaggaaat ctccg
//
LOCUS       DASFQD010000197         1452 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.200, whole genome shotgun sequence.
ACCESSION   DASFQD010000197 DASFQD010000000
VERSION     DASFQD010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.200"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(36..887)
                     /locus_tag="U1021_002206"
     CDS             complement(36..887)
                     /locus_tag="U1021_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEM4712671.1"
                     /translation="MTKWKIVADSGCDYRQLANLAPNTEFISVPLTIQVGEQAFVDDA
                     SLDIDHMMEVMEASKSAAGSACPSPQAYQAAFEGAENIIVVTITGGLSGSFNAARVAR
                     DMYIEEHPNVNIHLIDSLSASGEMDLLVDEINRLIGAGLDFPQVVEAITHYREHSKLL
                     FVLAKVDNLVKNGRLSKLVGTVVGLLNIRMVGEASAEGKLELLQKARGHKKSVTAAFE
                     EMKKAGYDGGRIVMAHRNNAKFFQQFSELVKASFPTAVIDEVATSGLCSFYAEEGGLL
                     MGYEVKA"
     gene            1014..1418
                     /locus_tag="U1021_002207"
     CDS             1014..1418
                     /locus_tag="U1021_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM4712672.1"
                     /translation="MTGRKISPQSLKNLYQSNKEANQLTKESIETALLFLLEKKELKQ
                     ISVSELVRKAGVSRNAFYRNYKSKEEILEIYYERTSSNLKKKWHDLQDKVQKDGVKQS
                     FADFVQEQKRKAEQSKALSNVSQWIKEKTKRD"
BASE COUNT          460 a          340 c          242 g          410 t
ORIGIN      
        1 ctactgttga ttttcattga gtattactct gtgaatcacg ctttcacttc atagcccatc
       61 aaaagtccac cttcttcagc ataaaaactg catagacctg atgttgcaac ttcgtcaata
      121 acagccgttg gaaaacttgc ttttaccaac tctgagaatt gttggaagaa cttagcattg
      181 ttgcggtggg ccatgacaat tcgaccacca tcatagcctg cttttttcat ttcttcaaag
      241 gctgctgtca cagatttctt atgaccacgc gccttttgaa gcaactctaa ttttccttca
      301 gcgcttgcct caccaaccat acggatattg agaagaccaa cgacagtgcc taccaatttg
      361 ctcagtcttc cattcttaac aagattatca accttcgcta aaacaaagag gagcttactg
      421 tgttcccgat aatgagttat cgcttctact acttgtggaa aatctaatcc tgcaccaatt
      481 aagcgattga tttcgtcaac aagtaaatcc atttccccac tggctgacaa actatctatc
      541 aaatggatat tgacattcgg atgctcttcg atatacatat ccctagctac acgtgccgca
      601 ttaaaactac ccgatagccc acctgtaatc gtcacaacga taatgttctc agctccctca
      661 aaagctgcct gataagcctg cggacttggg cacgcagacc ccgctgcaga cttagatgct
      721 tccatcacct ccatcatgtg atcaatatcc aagcttgcat catcaacaaa tgcttgttct
      781 ccaacttgga tggtaagtgg cacactaata aattcagtgt tcggagctag attagctaat
      841 tgacgatagt cacagcccga atctgcaaca attttccatt ttgtcataat attctcattt
      901 ccaattttac ttttttattt gacaataaat ctctatttac ttacaattat atcattaaac
      961 taccccatct gaaagcattt tctttcagat gtgacactcg gaaaaggaaa actatgacag
     1021 gtcgtaaaat ttcaccccaa tctttgaaaa acctctatca atcaaataaa gaagcgaatc
     1081 aactgactaa ggaatcaata gaaactgctc tgctatttct cctagagaaa aaggagctca
     1141 agcaaatttc agtatctgaa ttggttcgta aagcgggagt ttctcgcaac gctttctatc
     1201 gcaattataa gtcaaaagaa gaaattttag agatttatta cgaacggact tccagcaacc
     1261 ttaaaaagaa atggcatgat ttgcaggaca aggttcaaaa ggacggcgtc aagcaaagct
     1321 ttgcagattt tgtccaggaa caaaaacgca aggcagagca aagcaaggcc ctgtccaacg
     1381 tcagtcaatg gatcaaggaa aaaacaaaac gggattaaaa gtccaatgtc attaagttaa
     1441 ctaacctatc ac
//
LOCUS       DASFQD010000198         1427 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.201, whole genome shotgun sequence.
ACCESSION   DASFQD010000198 DASFQD010000000
VERSION     DASFQD010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1427)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1427)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1427
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.201"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(21..623)
                     /locus_tag="U1021_002208"
     CDS             complement(21..623)
                     /locus_tag="U1021_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM4712673.1"
                     /translation="MRILVAEDQAMLRDALCQLLGFQDAVEAVLQAENGSQAIALLEK
                     EPVDVVLLDIEMPEQTGLDVLEWVRGQALPVKVVIMTTFKRPGYFERAVKADVDAYVL
                     KERSIADLMRTIETVLAGRKEYSPELMDILLTQRSSLTDQESHLLKLVAEGLSNKEIA
                     SQLHLSDGTVRNYMTSILSKLGAENRTAAVKIAQEKGWLV"
     gene            complement(620..>1427)
                     /locus_tag="U1021_002209"
     CDS             complement(620..>1427)
                     /locus_tag="U1021_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM4712674.1"
                     /translation="ENRPTYRTVSYGILLLAIILWALFGPVPFEMRAFALVIHFFGLA
                     LLIFSWIETKREALQQRLQEQNASINLLLAENERNRIGQDLHDTLGHVFAMLSVKAEL
                     VQTLLDHDQIDQAKKEVADLQTLVKDSMQEVRQIVQSLKQHTVAEELQILQQMLDLAG
                     VDLVVLGGEIAEQLSLPVQNKLAMVLRELANNLLKHSQASKCRLVFEKDQQELVLHYE
                     DNGVGFTQLTGQELHTIKDRLVTVKGSLEFLSLAKPTRLSIRIPFEEVVE"
BASE COUNT          338 a          397 c          333 g          359 t
ORIGIN      
        1 ttctccccaa tctcattcgt ttatactaac caaccctttt cctgtgcaat cttaaccgca
       61 gcggtacggt tttctgctcc cagtttggac aggatagagg tcatgtagtt gcggactgtc
      121 ccgtcagaca ggtggagctg gctggcgatt tccttattgg acagaccctc tgccaccagc
      181 ttgagtaagt gactttcttg gtccgtcaag gaactgcgtt gggttaggag aatgtccatc
      241 aactctggtg aatattcctt acgccctgcc aagaccgttt caatggtccg catgaggtct
      301 gcgatggagc gttccttgag cacataggca tccacatctg ccttgaccgc ccgctcgaaa
      361 tagcccggtc gcttgaaggt ggtcatgatg acgaccttga caggcaaggc ttgtccccgc
      421 acccattcca agacatctag gcccgtctgt tccggcattt ctatatctag tagcaccaca
      481 tctactggct ctttttccaa aagagcaatg gcctgactgc cgttttctgc ctgtaaaaca
      541 gcctcaaccg catcttgaaa gcccaagagc tgacagaggg cgtcccgcag cattgcttga
      601 tcttctgcaa ctaagattct cattctacca cctcctcaaa cggaattcgg atggacaggc
      661 gggtgggctt tgccagagaa agaaactcca aacttccttt caccgttacc aacctgtctt
      721 ttatggtatg caattcctga cctgtcaact gggtaaagcc cacaccgttg tcttcgtagt
      781 gtaaaaccaa ttcttgctgg tctttttcaa aaaccaaacg acatttgcta gcctggctgt
      841 gcttgagcag attgttagcc aactctctca gcaccatagc cagcttgttc tggacgggta
      901 agctgagctg ctctgctatt tccccgccca aaacgaccaa atccactcct gccaagtcca
      961 acatctgctg caaaatctgg agttcctctg ccacggtgtg ctgcttgagg gactggacaa
     1021 tctggcggac ctcctgcatg gagtccttga ccaaggtctg aaggtctgcc acctccttct
     1081 tggcctggtc aatctggtcg tggtctaaca aagtctggac cagctcggcc ttgacagaca
     1141 gcatggcaaa gacatgacca agtgtgtcgt gcaagtcctg accgatacgg ttgcgttcat
     1201 tctcagccag caggagattg atggacgcat tctgttcctg taggcgttgc tgaagggctt
     1261 cccgcttggt ctcaatccag ctgaaaatca gcaaggccaa gccgaaaaag tggataacaa
     1321 gtgcaaaagc tctcatctca aaaggaacag ggccaaagag agcccatagg ataatagcca
     1381 gcaacaaaat cccgtaagac accgtccgat aggtcggtcg attctct
//
LOCUS       DASFQD010000199         1332 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.202, whole genome shotgun sequence.
ACCESSION   DASFQD010000199 DASFQD010000000
VERSION     DASFQD010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.202"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..>1332)
                     /locus_tag="U1021_002210"
     rRNA            complement(<1..>1332)
                     /locus_tag="U1021_002210"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          288 a          399 c          304 g          341 t
ORIGIN      
        1 tcaccgactt cgggtgttac aaactctcgt ggtgtgacgg gcggtgtgta caaggcccgg
       61 gaacgtattc accgcggcgt gctgatccgc gattactagc gattccgact tcatgtaggc
      121 gagttgcagc ctacaatccg aactgagact ggctttaaga gattagcttg ccgtcaccga
      181 cttgcgactc gttgtaccag ccattgtagc acgtgtgtag cccaggtcat aaggggcatg
      241 atgatttgac gtcatcccca ccttcctccg gtttattacc ggcagtctcg ctagagtgcc
      301 caactgaatg atggcaacta acaatagggg ttgcgctcgt tgcgggactt aacccaacat
      361 ctcacgacac gagctgacga caaccatgca ccacctgtca ccgatgctcc gaagagaaac
      421 cctatctcta gggcggtcat cgggatgtca agacctggta aggttcttcg cgttgcttcg
      481 aattaaacca catgctccac cgcttgtgcg ggcccccgtc aattcctttg agtttcaacc
      541 ttgcggtcgt actccccagg cggagtgctt aatgcgttag ctgcggcact gagtcccgga
      601 aaggacccaa cacctagcac tcatcgttta cggcgtggac taccagggta tctaatcctg
      661 ttcgctcccc acgctttcga gcctcagcgt cagttacaga ccagagagcc gctttcgcca
      721 ccggtgttcc tccatatatc tacgcatttc accgctacac atggaattcc actctcccct
      781 tctgcactca agtttgacag tttccaaagc gtactatggt taagccacag ccttttactt
      841 cagacttatc aaaccgcctg cgctcgcttt acgcccaata aatccggaca acgctcggga
      901 cctacgtatt accgcggctg ctggcacgta gttagccgtc cctttctggt aagataccgt
      961 caaatgagaa actttccact cttctcacag ttcttctctt acaacagagc tttacgatcc
     1021 gaaaaccttc ttcactcacg cggcgttgct cggtcagggt tgcccccatt gccgaagatt
     1081 ccctactgct gcctcccgta ggagtctggg ccgtgtctca gtcccagtgt ggccgatcac
     1141 cctctcaggt cggctatgta tcgatgcctt ggtgagccgt tacctcacca actagctaat
     1201 acaacgcagg tccatctcat agtgaagcaa ttgctccttt caagtatcta ccatgcggta
     1261 aatactgtta tgcggtatta gctatcgttt ccaatagtta tcccccgcta tgaggcaggt
     1321 tacctacgcg tt
//
LOCUS       DASFQD010000200         1309 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.203, whole genome shotgun sequence.
ACCESSION   DASFQD010000200 DASFQD010000000
VERSION     DASFQD010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.203"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            99..>1309
                     /locus_tag="U1021_002211"
     CDS             99..>1309
                     /locus_tag="U1021_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012677188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HEM4712675.1"
                     /translation="MEQLNLITNLLRIKDKNIVITDEYDMGTHLELHGHLDYTAPKCP
                     SCKGQMAKYDFQKASKIPYLETAGYPLLIRLKKRRFKCKECGKMVVAETPLVKKNHQI
                     SVAVNQKIAQLLIENQAMTHIAHRLSISTSSVIRKLNEFKFETDWNTLPEVMSWDEYG
                     FKKGKMSFIAQDFDSLKVISILDGRTQATIRNHFLRYSRQARNRVKVITMDMFSPYYQ
                     LAKQLFPHAKIVLDRFHIVQHLSRAMNRVRIQIMNQLDRKSQEYRALKRYWKLIQQDS
                     RKLSDKRFYRPMFRMHLTNKEILEKLLSYSDELRQHYELYQFLLFHFQEKNSVHFFDL
                     IEQEIANVNPIFQTVFKTFLKDKDKVLNAMELPYSNAKLEATNNLIKVIKRNAFGFRN
                     FENFKKRILIA"
BASE COUNT          444 a          294 c          222 g          349 t
ORIGIN      
        1 aatccaccat ggaaattatg gagctttttt gagtatagaa aaaagtccca tatgacctat
       61 aatgaaaagc gacgaaactc acattagaaa gggttcatat ggaacaacta aatcttatca
      121 caaatcttct cagaattaaa gacaaaaata ttgttatcac tgatgaatat gatatgggaa
      181 ctcacttaga actccacggt cacttggatt atacagcccc taaatgccct tcctgcaagg
      241 gacaaatggc caaatacgat ttccaaaaag cctccaaaat tccctaccta gaaacagctg
      301 gttatccact ccttatccgc cttaaaaagc gtcggttcaa gtgtaaagaa tgtgggaaaa
      361 tggttgtcgc tgaaacacct cttgtcaaga agaaccacca aatttctgtc gcggttaacc
      421 agaaaatcgc ccaattactc atcgaaaatc aagcaatgac acatattgca cacaggctat
      481 ctatctcaac atcatcagtt attcgaaaac tcaatgagtt caagtttgaa acagattgga
      541 ataccttacc tgaggtgatg agctgggatg aatatggctt caagaaggga aaaatgagtt
      601 tcatcgctca ggatttcgac tcgctaaaag tcatctctat cctcgatgga cgcacgcaag
      661 ccacgattag aaaccacttc ctacgctact ccagacaggc tagaaaccgc gttaaagtca
      721 tcactatgga catgtttagc ccatactacc aattggctaa acagcttttt ccgcatgcca
      781 aaatcgtcct tgatcgcttt catattgtgc aacacctcag ccgtgctatg aaccgtgtcc
      841 gcattcaaat catgaatcaa ctcgatagaa aatcgcagga atatcgtgct ttgaaacgct
      901 actggaaatt gatacaacaa gatagccgta aactcagcga taaacgattt tatcgcccta
      961 tgtttcgcat gcacttgact aacaaggaaa ttctagaaaa actcctatcc tactcagacg
     1021 aactccgaca gcactatgaa ctctatcaat ttctcttgtt ccatttccaa gagaaaaact
     1081 cagttcattt ctttgacctt atcgaacagg aaatagccaa tgttaatcct attttccaga
     1141 cggtatttaa gacatttcta aaggataaag acaaggtttt aaacgccatg gaattgcctt
     1201 attcaaacgc caaactggaa gctaccaaca atctcatcaa agtcattaag agaaatgcct
     1261 ttggtttcag gaactttgaa aattttaaaa aacggatttt gattgcttt
//
LOCUS       DASFQD010000201         1278 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.204, whole genome shotgun sequence.
ACCESSION   DASFQD010000201 DASFQD010000000
VERSION     DASFQD010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1278)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1278)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.204"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..>1278
                     /locus_tag="U1021_002212"
     rRNA            <1..>1278
                     /locus_tag="U1021_002212"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          381 a          242 c          381 g          274 t
ORIGIN      
        1 aaacatctaa gtagctgcag gaagagaaag caaaagcgat tgccttagta gcggcgagcg
       61 aaacggcagg agggcaaacc gaggagttta ctcctcgggg ttgtaggact gcaatgtgga
      121 cttaaagagt atagaagaac tacctgggaa ggtaggccaa agagagtaac agcctcgtat
      181 ttgaaatatt ctttatacct agcagtatcc tgagtacggc gagacacgcg aaatctcgtc
      241 ggaatccggg aggaccatct cccaacccta aatactctct agtgaccgat agtgaaccag
      301 taccgtgagg gaaaggtgaa aagtaccccg gaaggggagt gaaatagaac ctgaaaccgt
      361 gtgcctacaa caagttcgag cccgttaatg ggtgagagcg tgccttttgt agaatgaacc
      421 ggcgagttac gatatgatgc gaggttaagt tgaagagacg gagccgtagg gaaaccgagt
      481 cttaataggg cggattagta ttatgtcgta gacccgaaac catgtgacct acccatgagc
      541 aggttgaagg tgcggtaaga cgcactggag gaccgaacca gggcacgttg aaaagtgctt
      601 ggatgacttg tgggtagcgg agaaattcca aacgaacttg gagatagctg gttctctccg
      661 aaatagcttt agggctagcg tcgacatttg agaatcttgg aggtagagca ctgtttggat
      721 gagggggcca tctcggttta ctgatttcag ataaactccg aatgccaatg atttatggtc
      781 ggcagtcaga ctgcgagtgc taagatccgt agtcgaaagg gaaacagccc agaccaccag
      841 ctaaggtccc aaaataattg ttaagtggaa aaggatgtgg ggttgcacag acaactagga
      901 tgttagctta gaagcagcta ttcattcaaa gagtgcgtaa tagctcacta gtcgagtgac
      961 cctgcgccga aaatgtaccg gggctaaaac aatttaccga agctgtggat aacacattag
     1021 tgttatggta ggagagcgtt ctatgtgtga agaaggtata ccgtgaggag tgctggaacg
     1081 catagaagtg agaatgccgg tatgagtagc gaaagatggg tgagaatccc atccaccgta
     1141 agactaaggt ttccagggga aggctcgtcc gccctgggtt agtcgggacc taaggagaga
     1201 ccgaagggtg tatccgatgg acaacaggtt gatattcctg tactagagta tgaagtgatg
     1261 gagggacgca gtaggcta
//
LOCUS       DASFQD010000202         1272 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.205, whole genome shotgun sequence.
ACCESSION   DASFQD010000202 DASFQD010000000
VERSION     DASFQD010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1272)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.205"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..699
                     /locus_tag="U1021_002213"
     CDS             <1..699
                     /locus_tag="U1021_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEM4712676.1"
                     /translation="TVHLYYKDSNGGLTGAGGTTTHLSNPSAQRSYTVYIDPGHGGRD
                     SGASYGGVHEKNLALSVSNKLRENLLQYGINVLMTRTGDYDVDFKTERSRMTNASNAD
                     LFISIHFNATGAGVSNATGIETYWYQYDPEYQPKINKEMHNNPTRLAESEILANKVQE
                     SLIKETGAVNRGVRRETFAVLRETAIPAILVELGFMDNPSELQVIKQDSYHTRLAKAL
                     AQGVMNWYGAVEGK"
     gene            777..1205
                     /locus_tag="U1021_002214"
     CDS             777..1205
                     /locus_tag="U1021_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014637731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HEM4712677.1"
                     /translation="MEQSSKANSILSSVMLSQAILESAWGTSYLATHGNNLFGIKADA
                     AWTGATIEIITNEYRDGEKKQEKHLFRKYDSWNESVADYAKFFTSTPWRIKNYQSFRE
                     ATDYQQAILALRQSGYATDPKYGEKLRSIIENYKLYLLDN"
BASE COUNT          416 a          229 c          280 g          347 t
ORIGIN      
        1 acggttcact tatattataa ggattcaaat ggtggtttga caggtgcagg tggtacaacg
       61 actcacttat caaatccgtc ggcacagcga tcctacacag tctatattga cccagggcat
      121 ggagggcgag actcgggcgc ttcttacggt ggcgtacatg aaaaaaatct tgctttgtct
      181 gtttcaaata agttgcgtga aaatctcttg caatatggaa tcaatgtttt gatgacccgt
      241 acaggtgatt atgatgtaga cttcaaaaca gagaggtcac gaatgacgaa tgcaagcaac
      301 gcagacttat ttattagtat ccattttaat gcgacgggag caggagtttc gaatgcgact
      361 ggtatcgaaa catactggta tcaatacgat ccggaatacc aacctaaaat taataaagaa
      421 atgcataata accctactcg tttagctgaa agtgagattt tagccaacaa ggttcaggag
      481 agtttaatta aagaaacagg tgcagttaac cgtggcgtaa gaagagaaac ttttgcagtc
      541 cttcgcgaga cagcaattcc tgccattcta gtggagctag gatttatgga taatccttcg
      601 gaattacaag ttatcaaaca agattcttat cacactcgcc ttgcgaaagc attggcacaa
      661 ggcgtaatga attggtatgg tgctgttgag ggaaagtaga aattgcaggt acaggtattg
      721 aaacaggaaa actttctaat gatcaaaaaa gtttcatagc taatctagta cctgcaattg
      781 agcaaagttc aaaagctaat tctatccttt cgagcgtcat gttatctcaa gccatcctcg
      841 aaagtgcatg gggaacgtca tacttggcga ctcatgggaa taatcttttt ggcatcaaag
      901 cggatgctgc gtggacgggt gctacaattg aaatcattac caatgaatac cgtgatggtg
      961 agaagaagca agaaaagcac ttgtttagaa aatatgattc atggaatgaa agtgtagcag
     1021 actatgctaa gttctttacc tctactccgt ggagaataaa aaattaccag agtttcagag
     1081 aggcaactga ttatcaacaa gcgattcttg cgctaagaca atcaggatat gctactgatc
     1141 cgaaatatgg tgaaaaatta cgatcaatta tcgagaatta caagctttat cttttagata
     1201 attaagtttt ttgcccagcc tctttcaggg gacaaataaa tagccttgct caaaaacgag
     1261 caaggctatt tt
//
LOCUS       DASFQD010000203         1264 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.206, whole genome shotgun sequence.
ACCESSION   DASFQD010000203 DASFQD010000000
VERSION     DASFQD010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.206"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..902)
                     /locus_tag="U1021_002215"
     CDS             complement(<1..902)
                     /locus_tag="U1021_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4712678.1"
                     /translation="MNDKEFGQRVRQLRETASLTREQFCDDELELSVRQLTRIEAGTS
                     KPTFSKIQYIATRLGMGLYELMPDYVSLPERYSKLKFDVLRTPTYENEELMGKRADMM
                     TEIYDDYYDDLPEEEKIAIDAIQSIIDVFETKTAEFGQDILEDYFEQIQRKPQFSAND
                     LLIIQLYLINLRMEVKQSSDFQHFLDLVEKLPSQVELVESGDLFILRDVMITSVGLLG
                     QKEEFSYIPTLFEALDKIMQKTQDFQKKPILNLLKWKYELLINKDKDAATALYEEALL
                     FARIIGNAHLTAKLEEEWRKDSQL"
     gene            complement(994..>1264)
                     /locus_tag="U1021_002216"
     CDS             complement(994..>1264)
                     /locus_tag="U1021_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015057423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HEM4712679.1"
                     /translation="KETIERLFGTAKEYHNLRYTREKGKSKMEDKIGLTLACLNLKKL
                     VKRMARRPFYFVQMGWFKRQNSHFFLKTVKKTNTKTMFVCNLKQT"
BASE COUNT          357 a          264 c          201 g          442 t
ORIGIN      
        1 tataattgac tatcttttct ccactcttct tctaatttag ccgttaggtg ggcattacca
       61 attattcttg caaaaagaag tgcttcttca tataaggcag ttgcagcatc tttatcttta
      121 tttattaaca actcatattt ccacttaagc agattaagaa taggtttctt ttgaaaatct
      181 tgggtcttct gcattatctt atcaagtgct tcaaagagtg taggaatata gctaaattct
      241 tccttttgtc ccaaaagtcc aacagaagtt atcatcacat cccttaaaat aaacaaatcc
      301 ccagattcaa ctaattctac ttggcttggt aacttttcca ccaagtctaa aaagtgctga
      361 aaatcactac tctgtttaac ttccattctc aaattgatta aatagagctg gattatcaac
      421 aaatcgttgg ctgaaaattg gggttttctt tggatttgtt caaaataatc ttctagaata
      481 tcttgaccaa attctgctgt cttcgtttca aatacatcaa taatagattg aatggcatca
      541 atcgctattt tctcctcctc aggcaagtcg tcgtaataat catcatagat ttccgtcatc
      601 atatctgccc gttttcccat caattcctca ttttcataag tcggtgtacg aagtacatca
      661 aacttcagtt tggaatatcg ttcaggtagc gacacataat caggcataag ctcatagagc
      721 cccatgccta agcgggttgc gatatactgg atttttgaaa aagtcggctt agaagtacct
      781 gcttcgatac gggttagttg gcggacggag agctcaagtt cgtcatcgca aaactgttca
      841 cgtgtcagac tagcggtttc tcgaagttga cgtacacgtt gtccaaattc cttatcgttc
      901 ataaaatacc tccaaatatt cttttgtata ttatagcaaa attaccactc aatttccata
      961 ctttttctgt ttttaaataa aaaacaaacg gttttacgtt tgtttcagat tgcagacaaa
     1021 catcgttttg gtgtttgtct tttttactgt ttttagaaaa aaatggctgt tttggcgctt
     1081 aaaccacccc atctggacaa aataaaaagg ccttcttgcc atccttttaa ctagtttttt
     1141 gagatttaag cacgccaaag tcagtccaat cttatcctcc attttggact tgcctttttc
     1201 cctcgtgtag cgcagattat ggtattcctt ggctgtgcca aatagccgtt caatcgtctc
     1261 tttc
//
LOCUS       DASFQD010000204         1250 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.207, whole genome shotgun sequence.
ACCESSION   DASFQD010000204 DASFQD010000000
VERSION     DASFQD010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1250)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1250)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.207"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(198..1053)
                     /locus_tag="U1021_002217"
                     /pseudo
     CDS             complement(198..1053)
                     /locus_tag="U1021_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002987985.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS982 family transposase"
BASE COUNT          371 a          223 c          248 g          408 t
ORIGIN      
        1 catttgctat tgatactcta tggcaaatat tgtattctgc ttcagaaggg agttattata
       61 ttggttttta gctcctcatt tcttagctct actaccagta tggcttgaaa gaatcatgcc
      121 tgtgtctaaa gatctagccg tttaaaacta tatttgtata tttctaagat tgtgataaat
      181 aactattacc cgttgtgcta gctcatttca aaatagcgta agttatgagc tagattaatt
      241 tgttcaattc gtaactgtag tccagctagg cttctagcta atgtatgttc gatgtcaaag
      301 agacgacaca gttcgtttca atagttcgtc tcatggccat tactttccaa ttgttatgtt
      361 cttcgggccc tgtcatgttt ttacgaaacg gcgtccatag atggtaacct tcttactcta
      421 agtccttttt gagttcacta cttaggtagc ctaaatcacc taagataacc gattgcttac
      481 acccctctaa tagctcataa accaccttga tgtcatgaac agaggctggc gtgacaacat
      541 agttcaaaat ataaccagat aaggtcacta gcagatgaac cttgaagccg tagaaccaaa
      601 gatgtttaga ggtgttgtag ccaatatcgg ctaatccttt aaaaatggta actctgtgat
      661 tgcaaacagg ttggcaaagt ggcaaaggaa aactatctat aatggctagt ttatcagatg
      721 gaagcatttc actcatagct tttcggatta attggactag ccaaatcaat tgttttgacc
      781 gacgattgaa acggcttctt tctagtaact gaccgcaagg gaagaggtgg cagatgctgt
      841 agaaatggcg ctgtgatgtc atacctagtt cagcttgtaa caaaagtaag agacaaggat
      901 tgattgatct gaaactttaa ctaagccaac attacgccaa tatttgaagg aatccgggca
      961 atagttgtgg tagaagtgat gacaaatttg tgataattgg cgtacattcc attgcaaatg
     1021 atgagattta gcggtatact gtaagtggct catttggact aacctactgt atgtttcgtc
     1081 acttacagta tagtccattt gggcttttta ttgtattttg aaataaacta gcaccacgag
     1141 taactattga ttcgctcttc ttgtaaatgc tctgtttctg atatgtatca tctaataaaa
     1201 aaggctctat aatttctgta gtgggtaaat ccactgtaga gattatagag
//
LOCUS       DASFQD010000205         1190 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.208, whole genome shotgun sequence.
ACCESSION   DASFQD010000205 DASFQD010000000
VERSION     DASFQD010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.208"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            239..>1190
                     /locus_tag="U1021_002218"
     CDS             239..>1190
                     /locus_tag="U1021_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001155321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HEM4712680.1"
                     /translation="MQGHYTPKGKHLTIDNRRLIERWKLENKSNREIAGLLGKAPQTI
                     HNEIKRGTTLQQVRKGVYKKVYSADYAQTVYHSNRKRSVKKIILTKEMKEKILHYHKQ
                     KFSPEMIVKKKQVKVGISTIYYWFHNGHLGLKKSDMLYPRKGKGGKKQASPNFKPAGK
                     SIEERPEVINLRLENGHYEIDTVLLTRAKNQCLLVLTDRRSRHQIIRLIPSKTAEAVN
                     QALRLLLAEYHILSITADNGSEFKRLSEVFPEEHIYYAHPYSSWERGSNENHNRLIRR
                     WLPKGTKKTTPKEVAFIENWINNYPKKCLDYKSPSEFLLGG"
BASE COUNT          421 a          210 c          247 g          312 t
ORIGIN      
        1 agccacctta ccttagtcaa gaattagatg tttcactatg tttgagtaag ttgatgattt
       61 catttgataa caggcttgaa gctgttaggc tagttgccca aggctaatca tagccttggt
      121 ttagctgaaa aaacagcttc aagggtgcct ggtgtcaaat gaaatgtgat ttaaggtata
      181 agaaaacacc tctgtgctat acttgttgtt caccacaaac acaaggaaag gcacagagat
      241 gcaaggacat tataccccaa aagggaaaca tttgacaata gataaccgtc gcttgattga
      301 gcggtggaaa cttgaaaata agtcaaatcg tgaaattgca ggcttgttag gaaaggcgcc
      361 tcaaacgatt cataatgaaa tcaagcgtgg gacaacctta caacaagtgc gaaaaggggt
      421 ctacaaaaaa gtttattctg ctgattatgc acaaactgtt taccattcca atcgaaaacg
      481 gtcggttaaa aagataatcc taacgaaaga aatgaaagag aagattttac actatcataa
      541 gcaaaaattt tcacctgaaa tgatagtgaa gaagaagcaa gtgaaagtag gtatttcaac
      601 catctactat tggtttcata atggtcattt aggattgaag aaatcggaca tgctttatcc
      661 tagaaaaggg aaaggtggca agaagcaagc tagtccgaac tttaagccag ctggtaaatc
      721 aatcgaagag cgaccagagg tcatcaatct tcgattggaa aacggtcatt atgaaattga
      781 tacagttcta ctaaccagag cgaaaaatca gtgtctttta gtcttaaccg accgacgaag
      841 tagacaccaa atcatacgat taattccaag taaaactgct gaagctgtca atcaggcact
      901 taggttacta ttggctgagt atcatatttt atcaataact gcagataatg gttcggagtt
      961 caaacgattg tctgaggtat ttcctgagga acatatctac tatgcacatc cctactcttc
     1021 atgggaaaga ggttcaaatg aaaaccataa tcgattgatt cggagatggt tacctaaagg
     1081 aaccaagaaa acgactccga aagaagtagc ttttatcgaa aattggatta acaactaccc
     1141 taaaaaatgc ttggactaca agtcgccaag tgaatttctt ttgggtggct
//
LOCUS       DASFQD010000206         1178 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.209, whole genome shotgun sequence.
ACCESSION   DASFQD010000206 DASFQD010000000
VERSION     DASFQD010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1178)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.209"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            7..315
                     /gene="yajC"
                     /locus_tag="U1021_002219"
     CDS             7..315
                     /gene="yajC"
                     /locus_tag="U1021_002219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014736441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEM4712681.1"
                     /translation="MEGLLFPVLMLGMIGFMFYSQRKQQKQRQDALSQIKKGDEIVTI
                     GGLFGVVDEIDDKKVVLDVDGVYLTFERGAIRNRVAEAANSVVVEETVETVQESAIEE
                     "
     gene            complement(474..602)
                     /locus_tag="U1021_002220"
                     /pseudo
     CDS             complement(474..602)
                     /locus_tag="U1021_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935801.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
BASE COUNT          312 a          184 c          254 g          428 t
ORIGIN      
        1 acacaaatgg aaggattatt atttcctgtt ttgatgcttg gcatgattgg ctttatgttc
       61 tatagccagc gcaaacaaca aaaacagcgc caagatgcac tcagtcaaat taaaaaaggt
      121 gatgaaattg tgaccattgg tgggctattt ggtgttgtcg atgaaatcga tgataagaag
      181 gttgttctcg atgttgatgg tgtttacttg acatttgaac gtggtgctat tcgtaaccga
      241 gtggcagaag cggcgaactc agttgttgtg gaagaaacgg ttgaaacagt tcaagaatct
      301 gcaattgaag agtaagaatt gctagtgaca gtttagcatt ttcgtctaag gctagttttc
      361 agattctcat tattcgtttt tcaacataca gtcaatattt tgaaaaaatc ggttttgatt
      421 agcgaaaatt attccttgta ttgaagtgtt tttacaatta aatatatgtt ttaggttatt
      481 gtatcaaaga tagctatctt acgttttgga cgaattgaga tgagtgggcc gtgtagaata
      541 tagacaacga tgttggcttg atggacatca atatctgcac aagattgata gagaatatcc
      601 atgatagtcc cgtcttctca agtttagtga gcttatctac cgaattttag ttgtattgtt
      661 tatactcatg cctattgcat attttggtgg tgctcgtcag tagagtggat cggtttttcc
      721 tgtgatggct aatagtcttc gagaatcaca agtagacgtt gttgacttga tttgatgaac
      781 tccagttcta tctgcatctg cgtcgtttag tctgattttg attttcattg agtataccat
      841 cattaactct tcaaccataa agccctcact aagatgttac atctagtggg ggttttatgg
      901 ttgctttcat tgttttgtgg gtgagagcag tgctgctatg gatgactttc ccactctctt
      961 ggtcccagtc atgtcgtttt ggaaattata gagcctgttt tccgaggtac ttcttgtccg
     1021 atttttgagc aaaagtgtta ttgttctcat cttctagcat ccaatgaact gtcaaatttt
     1081 ttgaaaaata tttgctcttg tttaactgtt agatagcggt gatttttacc atcatgtgtt
     1141 tcttttacag tagcagataa ccttttctgg aatatagt
//
LOCUS       DASFQD010000207         1139 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.210, whole genome shotgun sequence.
ACCESSION   DASFQD010000207 DASFQD010000000
VERSION     DASFQD010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.210"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(45..560)
                     /locus_tag="U1021_002221"
     CDS             complement(45..560)
                     /locus_tag="U1021_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QueT transporter family protein"
                     /protein_id="HEM4712682.1"
                     /translation="MNTSKWTARDMAEIALVAAIYVALTLTPPLNAISFGAVQFRLSE
                     MLNFLAFYNRKYIIAVTIGCMISNLIGFGVIDLFVGGFSTLIFVTLGVILFEKYKKDY
                     LFGGLFNKAFFYFSFFFAATMFTIALELKVLYDLPFFLTWLTTAAGELLSLLVGAVVI
                     DKLSKKINFEK"
     regulatory      complement(558..660)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01054"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class II; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF01054"
     gene            689..1126
                     /locus_tag="U1021_002222"
     CDS             689..1126
                     /locus_tag="U1021_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015647185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HEM4712683.1"
                     /translation="MKKLFYQLINNEVILYLIAGVAATLVYMITRMGLFLFIPSILLV
                     TLLANAVAILFAFWTNDRFVFKQAREGWPKRLVKFVSARIATLVMDMALAYLLVQAYP
                     QLIGQFVNHDLTLVNAISTLFSQVLVIVLNYVLSKLFVFKDKK"
BASE COUNT          376 a          232 c          197 g          334 t
ORIGIN      
        1 gtctacccac tacagttgac aaagagccca catttattgt atacttactt ttcaaaattt
       61 attttcttgg atagtttatc gataacaaca gctccaacta atagagaaag caattctcct
      121 gctgctgttg tcaaccaagt tagaaagaat ggtagatcat ataagacttt taattctaaa
      181 gcaatggtaa acatagttgc cgcaaaaaag aatgagaaat aaaagaaagc cttgttaaat
      241 aatccaccga atagatagtc cttcttgtat ttttcaaaca gaataactcc caacgtaacg
      301 aagattaatg tcgagaatcc acccacaaag aggtcaatca cgccaaaacc aatcaagttg
      361 gaaatcatgc aaccaatggt cacggcgata atatacttac gattataaaa agccaagaaa
      421 ttgagcattt cagacaaacg aaactgaaca gccccgaagg aaatagcatt caatggcggt
      481 gtcaaggtaa gagcgacata aatcgccgca acaagagcaa tttctgccat atctctggca
      541 gtccatttag atgtattcat aaaattctcc tttagcaaaa aagcttaaaa tatgcttggg
      601 taaagtgagc aagtcccaag ggtcattgaa tttatcaaca acgttgatta gtatagcata
      661 tttttcctaa aaatgataga ctagtcctat gaaaaaacta ttttatcaac tcatcaataa
      721 cgaagttatt ctctatttga ttgcaggtgt ggcagcaacc cttgtttata tgattacccg
      781 tatgggactc tttctgttca tcccatccat tctgctagta actcttttag ccaatgcagt
      841 agctatcctc tttgcctttt ggaccaacga ccgtttcgtt ttcaaacaag ccagagaggg
      901 ttggcctaag cgattggtca agtttgtatc tgcccgcatc gcgaccttgg tcatggatat
      961 ggctctagcc tatttattag tacaagccta cccacaattg attgggcagt ttgtcaacca
     1021 tgatttgaca cttgtcaacg ccatttccac tctcttctct caagtcttgg tcattgtcct
     1081 aaactacgtt ttaagtaaat tatttgtatt taaagataag aaatgaggtt gggcaaaaa
//
LOCUS       DASFQD010000208         1119 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.211, whole genome shotgun sequence.
ACCESSION   DASFQD010000208 DASFQD010000000
VERSION     DASFQD010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1119)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1119)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.211"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..>1119
                     /locus_tag="U1021_002223"
     CDS             <1..>1119
                     /locus_tag="U1021_002223"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712684.1"
                     /translation="SEGVDYTNLDNALASLNQALSSPIIDASTNTVISTITDTSQMTI
                     NTSTAEGLTATTSYTPSFTESAGFLAINTDMVIFKGTSIQTEDGRNAVSPVAALNPNG
                     FSSIRLYRTGANGLEEETDSGFKLDQSTGVLTGVLTGVFSGTISVTYNEVGVYSRSLI
                     YTDSASGYAYPPVEFKIRVIDTTVNNSLTNRLHKHIPSEEEVLNAVTVLTGGEFVYYN
                     MKVMSPIPATDGTATVRIITEQGVYKDVQVPITYRPNQAPTVTVSEQSVDRSGKTVID
                     VSKGVTVMDAEDDRDPDDSLTTTITYTVKDARGSIVHQGDSPNVPVEKFVAGIYRVTV
                     TATDSDNARAEETYVLTVTDRNSLSDSASTSASTSASTS"
BASE COUNT          343 a          226 c          263 g          287 t
ORIGIN      
        1 atctgaaggg gtcgattaca caaacttgga caatgcgctg gcgagcttga accaggcact
       61 ttcctcgccg ataattgatg cgtcaacaaa tacggttata agtactatta cagacacaag
      121 tcagatgacg ataaatacga gtactgcgga aggtttgacg gcaacgacta gctatacacc
      181 aagttttacc gaaagtgccg ggttcctagc tatcaatacc gatatggtca tctttaaggg
      241 tacaagtatt cagacagagg atgggagaaa tgcagtttct cccgttgctg cactaaatcc
      301 gaatggtttt tcaagtattc gtctctacag aacgggagca aatggtcttg aagaagaaac
      361 ggattcaggt tttaaactcg accagtcaac cggggtatta accggggtat taaccggggt
      421 attttcagga actataagtg tgacctataa cgaggttggt gtgtattcaa gaagtttgat
      481 ttatacggat tccgcctctg gatatgcata cccgcctgtg gagttcaaaa tccgggtgat
      541 agatacgaca gtaaacaact cactaacgaa tcgtttgcat aagcatattc cgtctgaaga
      601 ggaagtattg aatgcagtaa cagttttaac tggtggagag tttgtctatt acaatatgaa
      661 agtaatgtca cctattcctg cgacagatgg tacagcaaca gttcgtatca tcacagaaca
      721 aggcgtctat aaggatgttc aagttccaat tacctaccga cctaaccaag cacctacagt
      781 gacagtttct gagcaatccg ttgaccgtag tggaaaaaca gtgattgacg tctccaaggg
      841 tgttactgtg atggatgcgg aagatgacag agacccagat gatagtctta caaccactat
      901 tacctatacg gtaaaggatg caagaggtag tattgttcat caaggagact cgccgaatgt
      961 cccagtagag aaattcgtag caggaatcta tagggtaact gtaacagcga cagattccga
     1021 caatgctagg gctgaggaaa cgtatgtttt aactgttact gacaggaatt ctttatctga
     1081 ctcagcctca accagcgcaa gtaccagtgc ttcaacgtc
//
LOCUS       DASFQD010000209         1100 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.212, whole genome shotgun sequence.
ACCESSION   DASFQD010000209 DASFQD010000000
VERSION     DASFQD010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1100)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.212"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..856)
                     /locus_tag="U1021_002224"
     CDS             complement(<1..856)
                     /locus_tag="U1021_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEM4712685.1"
                     /translation="MGKKASLKKKLTYPVETETITYKRKKAKGVRQAIFSQFTPEIVH
                     HELQGEDCTCPDCHGQLKEIGSTVQRQELVFIPAQLKRIDHVQHAYKCQVCSQKNLSD
                     KIIKAPVPKAPLAHSLGSASIIAHTIHQKFNLKVPNYRQEEDWHKLGLPISRKEIANW
                     HIKSSQYYFEPIYDLLHEKLLEQPVLHADETSYKVLENDSQLTFYWTFLSGKHEKKGI
                     TLYHHDKRRSGLVVEEFLGDYAGYVHCDMWSAYRQLDKAQLVGCWAHVRRKFFEATPK
                     KTDKTSLRA"
     gene            complement(810..1016)
                     /locus_tag="U1021_002225"
     CDS             complement(810..1016)
                     /locus_tag="U1021_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEM4712686.1"
                     /translation="MDELLAIIKQQTSTIEQLTNELTLLREQVDYLRQKLYGKSSEKV
                     EYQPGQLSLFGEESLPEEEADLPS"
BASE COUNT          282 a          250 c          232 g          336 t
ORIGIN      
        1 tagctcttaa agaagtcttg tctgtcttct taggagtcgc ctcaaagaac tttcgtctaa
       61 catgagccca acaaccaacc agctgagcct tgtctaattg ccgataagca ctccacatgt
      121 cacaatgtac gtagcccgca taatccccta gaaattcttc cacaaccaag ccactccgtc
      181 gtttgtcatg atgatagagg gtgatgccct ttttctcatg cttcccagat aagaatgtcc
      241 agtagaaggt caattggcta tcattttcta agaccttgta ggaggtctca tccgcatgga
      301 gaacaggctg ctccaacaat ttctcgtgca acaggtcata aatcggctcg aaataatatt
      361 gactagactt gatgtgccag ttggctattt ccttccgact gatgggcaga ccaagcttat
      421 gccagtcctc ttcctgacgg taattgggta ccttcagatt gaacttctgg tgaatggtgt
      481 gggcgatgat agaagctgaa cccaggctgt gtgccaaagg tgctttagga acgggagcct
      541 tgataatctt atcgcttaga ttcttctgac tacatacttg acacttgtat gcgtgttgga
      601 catggtcaat ccgctttaat tgtgcgggaa tgaagaccaa ctcttgtcgt tgaacagtag
      661 aaccaatctc tttcaactgt ccatgacagt ctggacaagt gcagtcttcg ccctgcaatt
      721 cgtgatgaac aatctctgga gtgaattgac taaaaatagc ctgacgaact cccttagctt
      781 tcttgcgttt ataagtaatc gtttctgttt caactgggta agtcagcttc ttcttcaggg
      841 aggctttctt ccccaaacaa gctcagctga ccgggttgat actcaacttt ctctgatgat
      901 tttccgtaga gtttctgcct cagatagtca acctgttctc gaaggagggt tagctcattg
      961 gtaagttgtt caatcgttga ggtctgttgt ttaataattg ccaataactc atccatacgc
     1021 tcgatcctcc ttcttttata gtagagtgaa ttagaaacag gacatatatc taagtttgtc
     1081 aatttgagaa ctctaaagtt
//
LOCUS       DASFQD010000210         1095 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.213, whole genome shotgun sequence.
ACCESSION   DASFQD010000210 DASFQD010000000
VERSION     DASFQD010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1095)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.213"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..477)
                     /locus_tag="U1021_002226"
     CDS             complement(<1..477)
                     /locus_tag="U1021_002226"
                     /inference="COORDINATES: protein motif:HMM:NF024751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEM4712687.1"
                     /translation="MLQLLSGYPIIYIDETGIDTYLTRPRARAPRRHKVLEKISGRRF
                     ERISVVAGQIGNQFVAPMIYKESMTSDFFMKWFSEELLPSLSETHVIVMDNATFHPKK
                     QLDELCIEHHHFFLPLPPYSPELNPIETAWANLKKAIIELLPQFESINESLDCYFKT"
     gene            complement(515..844)
                     /locus_tag="U1021_002227"
     CDS             complement(515..844)
                     /locus_tag="U1021_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004298883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM4712688.1"
                     /translation="MAYDLDFRKRVISFVQDEGHTRKEACQLFDISVNTLYLWEQQLK
                     HHGTLAVKKRSSRPRKLPPDQLQKFVSEHPDAFLREIAEHFDCTPQSVWAALKKLKIT
                     LKKDKNL"
     gene            923..>1095
                     /locus_tag="U1021_002228"
     CDS             923..>1095
                     /locus_tag="U1021_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM4712689.1"
                     /translation="MKVLLATRLKNRRKELGWSQKELAEGVCDQGQISRIEKGTYMPG
                     ADLLHALAKKLQV"
BASE COUNT          337 a          197 c          224 g          337 t
ORIGIN      
        1 agttttgaaa tagcaatcca atgattcatt tatagattcg aattgcggta ataattctat
       61 gattgctttc tttaagtttg cccaagcagt ttcaattgga tttaattccg gtgaatacgg
      121 aggtaagggc agaaagaagt ggtgatgttc aatacaaagc tcatctagtt gtttcttagg
      181 gtgaaaagtc gcattatcca tcacaataac atgagtttca gataaggagg gtaacagctc
      241 ctctgaaaac cacttcataa aaaaatcact tgtcatactt tctttgtaaa tcatcggagc
      301 tacaaattga tttccaattt gaccagctac aactgaaata cgttcaaacc ttcgtccact
      361 aatcttctcc agaaccttat gcctcctagg agctctcgct cgtgggcgtg ttaaataagt
      421 atcaatgccg gtttcatcaa tgtaaatgat tggatagccg gataggagtt ggagaatggt
      481 tgagaactgc tggacttttc ctgcgtcctg ctctttataa gttcttgtct ttttttaaag
      541 ttattttgag tttctttaaa gcagcccaaa cagactgtgg tgtgcaatca aaatgttcag
      601 ctatttcacg gagaaaggca tctggatgct ctgagacaaa cttctgaagt tgatccggtg
      661 gcaattttct aggacgtgaa gaacgctttt taaccgccaa agtcccgtga tgttttaact
      721 gttgttccca taaatagaga gtgtttacgc taatatcaaa aagctgacaa gcttcttttc
      781 gagtatgacc ttcgtcttga acaaacgaaa tcactcgttt tctaaaatct aaatcgtatg
      841 ccataacttt agtataccat aattactgat ttaaaactga ttaactatat aataaatata
      901 gattggattc tgagaggttg atatgaaagt tttactagca acaaggttaa aaaatagaag
      961 aaaagaattg ggctggtcgc agaaggagtt ggcagaaggg gtctgtgatc aagggcagat
     1021 tagccgcatt gagaagggaa cctacatgcc tggtgcagac ttgcttcatg cccttgctaa
     1081 aaaactccaa gtcag
//
LOCUS       DASFQD010000211         1079 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.214, whole genome shotgun sequence.
ACCESSION   DASFQD010000211 DASFQD010000000
VERSION     DASFQD010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1079)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1079)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.214"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            136..>1079
                     /locus_tag="U1021_002229"
     CDS             136..>1079
                     /locus_tag="U1021_002229"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712690.1"
                     /translation="MAIFKGTRIQTVDGTNAVVPVTVTNGFSSVRLYRTRADRTASEE
                     ETDSGFTITPSTGRFSGTASATYNGVGVYSRSLSFTDSSGRATPLQDFKIWVMDATVN
                     NTSLTNRLYNHTPSQQEVLDAVTVLTGGSTIGYEKKLVSPIPTTNGTATVRITTRQGV
                     YKDVHVPITYRANQVPTVTVSDQFVDRGGKTAINVSTGVTVTDVEDDRYPNDSLTTTI
                     TYTVKDLRDSTVYHGNQPNVPVEKLVAGIYRVTVTAADSGGASTEKTYVLNVTDRNSV
                     SASVSASESASTSASTSASTSASTSASTSASMSASTSAS"
BASE COUNT          321 a          246 c          248 g          264 t
ORIGIN      
        1 acgtctgcat cgacaagcgc cagcacaagt gcttcaacct cggcaagcac aagtgcttca
       61 acatctgcaa gtacttcagc ctcaacgagt gcaagtacgt cagctagtgc cccgaccgta
      121 actggcatta acaatatggc catctttaag ggtacaagga ttcagacagt ggatgggaca
      181 aatgcagttg ttcccgttac tgtaacgaat ggtttttcaa gtgttcgtct ctacagaacg
      241 cgagcagata gaacggcaag tgaagaagaa acggattcag gttttacaat caccccgtca
      301 accgggagat tttcaggaac tgcaagtgcg acctataacg gggttggtgt gtattcaaga
      361 agtttgagtt ttacggattc ctctggacgt gcaacaccgc ttcaggactt caaaatctgg
      421 gtgatggatg cgacagtaaa caacacctca ctaacgaatc gtttgtataa tcatactccg
      481 tctcaacagg aagtattgga tgcagtaaca gttttaactg gtggaagtac gatcggttac
      541 gaaaagaaat tagtatcacc tattcctacg acaaatggta cagcaacagt tcgtatcacc
      601 acacgtcaag gcgtctataa ggatgttcac gttccaatta cctaccgagc taaccaagta
      661 cctacagtga cagtttctga ccaattcgtt gaccgtggtg gaaaaacagc gattaacgtc
      721 tccactggtg ttactgtgac ggatgtggaa gatgacagat acccaaatga tagtcttaca
      781 accactatta cctatacggt aaaggattta agagatagta ctgtttatca cggaaaccag
      841 ccgaatgtcc cagtagagaa attagtggca ggaatctata gggtaactgt aacagcggca
      901 gattccggcg gtgctagcac tgagaaaacg tatgttttaa atgttactga caggaattct
      961 gtatctgcct cagtatcagc cagcgagtcc gccagtactt cagcatcgac gtcagcaagt
     1021 acttcagctt caaccagcgc gagcacatct gcttcaatga gtgcaagtac gtccgcttc
//
LOCUS       DASFQD010000212         1057 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.215, whole genome shotgun sequence.
ACCESSION   DASFQD010000212 DASFQD010000000
VERSION     DASFQD010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.215"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..966
                     /locus_tag="U1021_002230"
     CDS             <1..966
                     /locus_tag="U1021_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014636190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEM4712691.1"
                     /translation="GVYWRPVWHALCDDFELILAQPAHMKAIPGQKTDKKDAHWIAKL
                     TRIGLLPRSFVPDETIQELRELTRQRKHYVESRNRETNRIHKFLQSGGIKLTTYIEDI
                     MGLSGRNLLQLLVDGTPITPRIVHQSVYTSLKKKVPQLLEALDGYFSDHHRFMLKQSL
                     EIYDFYQKQIELLEERITVYLSQYENHVETLDSIPGIDVITASVIISEVGVDMSQFPT
                     SGHLASWAGLCPGNNESAGKKRSTKIRHGNSYLKKCLCQAAFAARNQKGSTLADRFYQ
                     IQSRRGSQKATIALAHQLLKIAYILLKEQMTYPEFLAQKRLLGTS"
BASE COUNT          312 a          218 c          224 g          303 t
ORIGIN      
        1 ggtgtctatt ggcgacctgt ctggcatgct ctctgtgatg acttcgagct gatactcgct
       61 caaccagccc acatgaaggc tattccaggt cagaaaaccg acaagaagga cgctcactgg
      121 attgccaaat taacacggat tggtctgctt cctcggagtt tcgttcccga tgaaaccatt
      181 caagaattga gggagttgac cagacaacga aaacattatg tggaaagtcg caatcgagaa
      241 acaaaccgta tccataaatt tcttcagtca ggtggtatca agctaacaac ctatattgaa
      301 gatattatgg ggctatctgg tcgcaatctc cttcagctac tggttgatgg gacgcctatt
      361 acacctcgca ttgttcatca atccgtttat accagcttga agaagaaagt gccgcagctt
      421 ctggaagcct tggacggtta tttctctgac catcatcgct ttatgttaaa gcagtcctta
      481 gagatttatg atttttatca gaagcagatt gagttgttgg aagagcgaat tactgtctat
      541 ctatcacaat atgaaaacca tgtagaaaca ttggattcca tcccaggcat tgatgtcatt
      601 acagcttctg ttatcatttc tgaggttggt gttgacatga gtcagtttcc gacatctgga
      661 catttagctt cttgggctgg actctgtcca ggtaataatg agagtgctgg taaaaaacga
      721 agtaccaaga ttcgacacgg aaattcttat ttgaagaaat gtttatgtca agccgctttc
      781 gccgctagga accagaaagg aagtacccta gcagaccgat tttatcagat tcaaagtcgg
      841 cgtggctcac aaaaagcaac cattgcactt gcgcatcaac tattaaaaat agcctatatc
      901 cttttaaaag aacagatgac ttatcctgaa tttttagcac aaaaaagact actagggacg
      961 agctagtagc ctaatataaa aattgtttca ctttgattct atcataggga gggagtttct
     1021 gcattctttt gagttttcgt ataagaactc gaccaga
//
LOCUS       DASFQD010000213         1036 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.216, whole genome shotgun sequence.
ACCESSION   DASFQD010000213 DASFQD010000000
VERSION     DASFQD010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.216"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            44..229
                     /locus_tag="U1021_002231"
     CDS             44..229
                     /locus_tag="U1021_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712692.1"
                     /translation="MSHPIIPLTVPQSRRFEKRGRNDIMMKIRLGKVELTVFHTINQE
                     TLETILDKVLFYDHPTQ"
     gene            210..560
                     /gene="tnpB"
                     /locus_tag="U1021_002232"
     CDS             210..560
                     /gene="tnpB"
                     /locus_tag="U1021_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001846105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HEM4712693.1"
                     /translation="MTIQLSDLGQVYLVCGKTDMRQGIDSLAYLIKSQFNLDPFSGQV
                     YLFCGGRKDRFKALYWDGQGFWLLYKRFENGKLTWPNNEEEVKALTSEQVDWLMKGFS
                     IIPKINVSKSRDFY"
     gene            611..817
                     /locus_tag="U1021_002233"
     CDS             611..817
                     /locus_tag="U1021_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEM4712694.1"
                     /translation="MSSLEKIIETQSKTIEMMANELTLLREQVDYLRQKLYGKSSEKV
                     VYQPGQLSLFGEESLPEEEADLPS"
     gene            771..>1036
                     /locus_tag="U1021_002234"
     CDS             771..>1036
                     /locus_tag="U1021_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase zinc-finger binding
                     domain-containing protein"
                     /protein_id="HEM4712695.1"
                     /translation="MGRKVSLKKKLTYPVETETITYKRKKAKGVRQAIFSQFTPEIVH
                     HELQGEDCTCPDCHGQLKEIGSTVQRQELVFIPAQLKRIDHVQHA"
BASE COUNT          329 a          208 c          223 g          276 t
ORIGIN      
        1 tcctccagta tactgttaga aaaacaaaac tggaggattt attatgtcac accccatcat
       61 tccattgact gttccccaat ctcgccgctt tgagaagcga ggcagaaacg atattatgat
      121 gaaaattcgt ctcggaaaag tggagctcac agtctttcac actatcaatc aagaaacact
      181 agaaacaatc ttagataagg tactgttcta tgaccatcca actcagtgat ttaggtcaag
      241 tttacttggt ctgtggaaaa acagatatgc gtcagggaat tgattccctg gcctatctta
      301 tcaaaagtca gttcaacctg gatcccttct ccggtcaggt ctatctcttc tgcggaggtc
      361 gaaaagaccg gttcaaagct ctttattggg atggacaggg attttggtta ttgtataaac
      421 gttttgaaaa tgggaaattg acctggccaa acaatgaaga agaggtcaag gctctaactt
      481 ccgagcaagt cgactggctc atgaaaggat tttctatcat tccaaaaata aatgtttcaa
      541 aaagtcgtga tttctattga aatcatggct tttctttgtg tataatgaga taaaaagaag
      601 gagattggtt atgtcatcac tagaaaaaat tattgaaaca cagtcaaaaa cgatagagat
      661 gatggctaat gaactcactc tccttcgaga acaggttgac tatctgagac agaaactcta
      721 cggaaaatca tcagagaagg tcgtatatca accaggtcag ctgagcttgt ttggggagga
      781 aagtctccct gaagaagaag ctgacttacc cagttgaaac ggagaccatc acctataaac
      841 gcaagaaagc taagggagtt cgtcaggcta ttttcagcca gttcactcca gagattgtgc
      901 atcacgaatt gcagggcgaa gactgcactt gtccagactg tcatggtcag ctgaaagaga
      961 ttggctcaac tgttcaacga caagagttgg tcttcattcc tgcacaatta aagcggattg
     1021 accatgttca acacgc
//
LOCUS       DASFQD010000214         1026 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.217, whole genome shotgun sequence.
ACCESSION   DASFQD010000214 DASFQD010000000
VERSION     DASFQD010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.217"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..683
                     /locus_tag="U1021_002235"
     CDS             <1..683
                     /locus_tag="U1021_002235"
                     /inference="COORDINATES: protein motif:HMM:NF019142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="G5 domain-containing protein"
                     /protein_id="HEM4712696.1"
                     /translation="DTATGLITSSTKTEIVDPVDEVVSVGILETKVADTAPEQVIKPE
                     LKWTTTIVPIPFQTRYIVDNQLKLGEEIILVPGRNGQRQVIALVNGSVVGRNDEEIIS
                     DIVLLDPIEQIIKIGNRSTDKAIDLPSKKEKTDISNLGLTLPNNKVSSTPIKLAETPK
                     SIQYLTDRKYDSTVSPSQLQQTNGVILPKTGEQKENFLARLGYISLLSLEFCWAISTL
                     LKNKRKSK"
BASE COUNT          365 a          209 c          169 g          283 t
ORIGIN      
        1 tagacaccgc tacaggactg attacctcta gcactaagac ggaaatagtt gaccctgttg
       61 acgaggtggt aagtgtcggg attttagaga ccaaagttgc agatactgcc cctgagcagg
      121 ttataaaacc tgaactaaaa tggactacaa caattgttcc gattcctttc caaacgagat
      181 acatagtgga taatcaattg aagcttggtg aagagatcat ccttgttcca ggaagaaatg
      241 gtcaacgaca agttattgct cttgtaaatg gctcagtcgt tggaagaaac gatgaagaaa
      301 tcatttctga tattgttctc ctcgatccga tcgaacaaat tatcaaaatc ggaaaccgca
      361 gtaccgataa agcaatagat ctcccaagca aaaaagaaaa aacagatatt tcaaatcttg
      421 gactaacatt accaaataat aaagtaagct ctactccaat taaactcgca gagacaccaa
      481 aatcaattca atatctgact gacaggaagt atgattcaac agtttctccg agccagcttc
      541 aacaaaccaa tggcgtaata ttaccaaaaa caggtgaaca aaaagaaaac ttcctggcca
      601 gattgggata catttcccta ttatctttag aattttgttg ggctatctca actcttctca
      661 aaaataaaag gaagagtaaa taatatgtat ttccatccca aaaaaagtta gacttttcca
      721 tcccaaaaaa agttagactt ttccgtctaa ctttttgaga cagttcaaca tagggttact
      781 tctaattctt atgacattga cgactccttc cttcttatgg gaacttttga aagtcgacca
      841 gatctatact aatcgtctac ctcctctccc aagagataaa aaaactcttt ggaaataaga
      901 aaacagtatt gagtagaata gcataaactt actaataggc ctatgccacc caactccctt
      961 aaaggactct ataatttcta tagtgggcaa atccactgta gaaattatag atcctttttt
     1021 tcatat
//
LOCUS       DASFQD010000215         1014 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.218, whole genome shotgun sequence.
ACCESSION   DASFQD010000215 DASFQD010000000
VERSION     DASFQD010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 1014)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1014)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.218"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            141..>1014
                     /locus_tag="U1021_002236"
     CDS             141..>1014
                     /locus_tag="U1021_002236"
                     /inference="COORDINATES: protein
                     motif:HMM:TIGR01167.1,HMM:TIGR01168.1"
                     /note="The YSIRK form of extended signal peptide directs
                     nascent proteins to the cross-wall site, while signal
                     peptides lacking YSIRK direct proteins instead to the cell
                     pole. A large fraction of YSIRK proteins are surface
                     proteins anchored by sortase-mediated processing of a
                     C-terminal LPXTG motif; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YSIRK-type signal peptide-containing protein"
                     /protein_id="HEM4712697.1"
                     /translation="MFWKEKQNKFSIRKFNRGVASVIIGMTAALFFVPNLAIKAELTA
                     LAHTNVAREQISYKYVLYSELTSDEKARIQATIPARQVGDTHTYYMVYRPKTNLPQTG
                     DIPTFTSSLVGLGLLIIGLSLTKDRKKRIVRSLIILTATGSLSVAAISTGSLSGFDKQ
                     FSLAIGEALPQAVISIDQHEFVGYILEGHVNSEAITVSEAIIDEQGSLSELILPNILV
                     EGISKHSEAPIVDDIIPEEPTVPVVPSNPVTEQPEEPETPVPPSTEDEVQPEEPTAPV
                     APSEPITEQPEAPVP"
BASE COUNT          341 a          184 c          197 g          292 t
ORIGIN      
        1 attagatcaa gatataaata attatgtaaa taacaccgaa tatagtatat tgagccatat
       61 tttgtttgtt ttaaaacagt atattattag aaaaatatgc tatactttta agtaagaaga
      121 aacaaacgaa ggagcttcat atgttttgga aagaaaagca aaataagttt tctattcgca
      181 aatttaatag aggcgttgca tcagttatta ttggtatgac tgccgcctta ttttttgtac
      241 caaatttggc tattaaagca gaattgacag ctcttgccca tacaaatgta gcaagagaac
      301 agatttccta taaatatgtc ctttattcgg aactgacatc agatgagaag gcacgaattc
      361 aagcgaccat tccagcaagg caggttgggg atacccatac ttactatatg gtctatcggc
      421 caaagacaaa tttgcctcaa acaggagata taccgacttt tacaagtagt ctggttggtt
      481 tagggctatt gattatcggt ctatctctta caaaagatag gaaaaaacga attgttagaa
      541 gtctgattat tttaactgct acaggtagtc tttcagtggc tgcaatttct acaggtagcc
      601 tctcaggttt tgataaacaa tttagccttg ccataggtga agctttgcca caagcagtga
      661 tttctataga tcaacatgaa tttgtaggtt atattttaga agggcatgtt aattctgaag
      721 caatcacagt tagcgaagca attattgatg agcaagggtc attgagcgaa ttgatattgc
      781 caaatatatt ggttgaggga atatctaagc attcagaagc tcccattgtt gatgatatta
      841 ttcctgagga accaacagtg cctgttgtcc caagtaaccc agttactgaa caaccagaag
      901 aaccggaaac tcctgttcca ccatcaacag aagatgaagt tcaacccgag gaaccaacag
      961 cgccagttgc cccaagtgaa ccaataacgg aacaaccaga agcccccgtt ccac
//
LOCUS       DASFQD010000216          981 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.219, whole genome shotgun sequence.
ACCESSION   DASFQD010000216 DASFQD010000000
VERSION     DASFQD010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.219"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            125..>981
                     /locus_tag="U1021_002237"
     CDS             125..>981
                     /locus_tag="U1021_002237"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712698.1"
                     /translation="MFVFKGTRIQREYGKNTLFPVYARASEGFSSIRLYRTGDYREIT
                     EEETDSGFTIDQSIGEFSGTPSAIYNEIGGYPRALIYTDSSGRTSPPQHFRIFVVDTA
                     VDNTLLTNRLYNHTPSEEEVLDAVTVLDAGYLLDSEKRLMSPIPTTDGTATVRIVIHE
                     GVYKDVDVPITYQGAPTVTVSEQSVDRSGKTVIDVSAGVTVTDAEDDRDPHDSLTTTI
                     TYTVKDSNGSTVYQGDQPNVPVEKLVAGSYRVTVTATDAYGAKTEQTYVLNVTDRNPV
                     PASTSASTSA"
BASE COUNT          295 a          208 c          223 g          255 t
ORIGIN      
        1 atctgaaggg ctcgattaca caaacttgaa ccaggcactt ttctcgccga taattgatgc
       61 gtctacaacc agcgcaagta cctctgcatc aactataccc gggttccgat ctagcactag
      121 caatatgttc gtctttaagg gtacaaggat tcagagagag tatgggaaaa atacactttt
      181 tcccgtttat gcacgagcta gtgaaggttt ttcaagtatt cgtctctaca gaacgggaga
      241 ctatagagaa atcactgaag aagaaacgga ttcaggtttt acaatcgacc agtcaatcgg
      301 ggaattttca ggaactccaa gtgcgatcta taacgagatt ggtggctatc caagagcttt
      361 gatttatacg gattcctctg gacgtacatc accgcctcag cacttcagaa tctttgtggt
      421 agatacggca gtagacaaca ccttactaac gaatcgtttg tataatcata ctccgtctga
      481 agaggaagta ttggatgcag taacagtttt agatgctgga tatttgttag attccgaaaa
      541 gcgattaatg tcacctattc ctacgacaga tggtacagca acagttcgta tcgtcataca
      601 tgaaggggtc tataaggatg ttgacgttcc aattacctac caaggagcac ctacagtgac
      661 agtttctgag caatccgttg accgtagtgg aaaaacagtg attgacgtct ccgctggtgt
      721 tactgtgacg gatgcggaag atgacagaga cccacatgat agtcttacaa ccactattac
      781 ctatacggta aaggattcaa acggtagtac tgtttatcaa ggagaccagc cgaatgtccc
      841 agtagagaaa ttagtagcag gaagctatcg ggtaactgta acagcgacag atgcctacgg
      901 tgctaagact gagcaaacgt atgttttaaa tgttactgac aggaatcctg tacctgcctc
      961 aacgtcggca agcacatctg c
//
LOCUS       DASFQD010000217          951 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.220, whole genome shotgun sequence.
ACCESSION   DASFQD010000217 DASFQD010000000
VERSION     DASFQD010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 951)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.220"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..747)
                     /locus_tag="U1021_002238"
     CDS             complement(<1..747)
                     /locus_tag="U1021_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Arm DNA-binding domain-containing protein"
                     /protein_id="HEM4712699.1"
                     /translation="MIKQYQLKDGSVRYSYIAYVGIDPLTGKEKRVKKSGFKTQKEAR
                     IAESQLLLKVEQDGFFDEPDRITFEEVYKIWLEHYKNTVKASTYARQKAQADLHIIPA
                     FGACYVDKISLPVYQKQAQEWFKSYKKYANFIGMTKMVLDFAVNLGYIHDNPMKKIIK
                     PRKSSEVDEEEKKKENFYSREDLQKFLDCVAKEDKEEIACIFRLLAFTGMRKSEVLAL
                     RWKDLDFFTSRLSVSQIVAYGENNTIVYQTP"
BASE COUNT          233 a          186 c          181 g          351 t
ORIGIN      
        1 gggtgtttga tagacaatag tgttattttc tccgtaggct actatttggc taactgataa
       61 acgtgaggta aagaagtcta agtctttcca ccgtagggca agaacttcgc tttttctcat
      121 acctgtaaag gcgagtaagc ggaaaataca ggctatttct tccttgtctt cctttgctac
      181 gcagtctagg aacttttgca agtcttcacg gctgtagaag ttttcttttt tcttttcttc
      241 ttcatcgact tcagaggatt tacggggctt tattatcttc ttcatggggt tgtcatgaat
      301 atagcccaga tttaccgcaa aatctagtac catttttgtc ataccgataa agttagcata
      361 tttcttgtag ctcttaaacc attcttgtgc ctgtttttgg tacactggta ggcttatttt
      421 atccacgtag cacgcgccaa atgctggaat gatgtgtagg tctgcttgtg ccttttgtct
      481 ggcgtatgta ctagccttta cggtgttttt atagtgttcc agccatatct tatagacttc
      541 ctcaaaggtt attctatctg gctcgtcaaa aaatccgtct tgctccactt ttagaagtag
      601 ctggctttca gctattcggg cttctttttg agttttaaaa ccgctctttt ttacgcgctt
      661 ttctttgcct gtaagtgggt ctatacctac ataagcaata taagagtatc taacagagcc
      721 gtcttttaat tggtattgtt taatcatttg tgtatccttc ctattggttt ccccacctaa
      781 tcgaaagaat aaaatagtgt gcgcgtgttt ataagtggtt tctaatagtg ttctaagtat
      841 gaaaaaagtg cctagcaaaa ctagacacct cacgcaaata tacaccctca ggcgttataa
      901 atgctttctc cgtttatcta gtttatagta tttgggatta aatatcaatt a
//
LOCUS       DASFQD010000218          862 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.221, whole genome shotgun sequence.
ACCESSION   DASFQD010000218 DASFQD010000000
VERSION     DASFQD010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 862)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.221"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(11..712)
                     /locus_tag="U1021_002239"
     CDS             complement(11..712)
                     /locus_tag="U1021_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712700.1"
                     /translation="MKTVGKFFAKKLASLMVLLLVLGLGIIWFRNSIFAWFQGIHKVQ
                     YEFVIKKFEAESKLVVAGAEVATTANQTFENNKLEEWPDWTEPITKLFVGREMSVDIP
                     VQTEFKLVLEGIEQSDVHIQNNTLTFKQPVLVEVDSQQHGQIKISNNSNGLLDKAVDA
                     FTSGQKAQEFLNEKSQEAIYKTSEEVLNDAERQEKVAAFAETALENLLNLNSEEKLEV
                     EIEVSDLNFQIVDKK"
BASE COUNT          247 a          184 c          142 g          289 t
ORIGIN      
        1 tttaaaaaaa ctatttctta tccacaatct ggaaattcaa gtcgctcact tctatctcaa
       61 cctcaagttt ttcttcggag ttcagattga ggaggttttc taaagccgtt tctgcaaaag
      121 cagcgacttt ttcctgacgt tctgcatcat tcaagacttc ctcacttgtc ttgtaaatgg
      181 cttcttggga tttttcattt agaaattcct gagccttttg tccagaggtg aaagcatcta
      241 ctgccttatc taaaagacca ttgctattat tgctaatttt gatttgacca tgctgttgag
      301 aatcaacttc gacaaggaca ggttgcttga atgtcaaggt gttattttga atgtgaacat
      361 ctgactgctc aattccttcc aagaccagtt tgaactccgt ctggacagga atatctacag
      421 acatttcccg tccaacaaag agcttggtaa taggctctgt ccagtctggc cattcttcta
      481 atttattgtt ttcaaaggtc tggttggcag tggttgctac ctcagctcct gccacaacca
      541 gtttactttc cgcttcaaac ttcttgataa caaattcata ctgaaccttg tggatacctt
      601 ggaaccaagc aaaaatacta tttctaaacc agataatgcc tagacctaaa accagtagca
      661 agaccataag gctagccaac tttttcgcga aaaactttcc aactgtcttc atacagttct
      721 ccttcatatt tgaattatcg gaacttgtcc tacaaccatt atatatatat atatgctgtc
      781 aagtattttt ggcatttttt tgaacatttt agaaaactca ctttgagaag ttaggaggat
      841 aaaaatctga caaatttgac aa
//
LOCUS       DASFQD010000219          853 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.222, whole genome shotgun sequence.
ACCESSION   DASFQD010000219 DASFQD010000000
VERSION     DASFQD010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 853)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 853)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.222"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            90..371
                     /locus_tag="U1021_002240"
     CDS             90..371
                     /locus_tag="U1021_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008808933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HEM4712701.1"
                     /translation="MARKESMAERNFKMKKDIHPEYRTVVFMDTTTGYKFLSGSTKKS
                     NETVEFEGETYPLIRVEISSDSHPFYTGRQKFTQADGRVDKFNKKYGLK"
     gene            complement(474..>853)
                     /locus_tag="U1021_002241"
     CDS             complement(474..>853)
                     /locus_tag="U1021_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM4712702.1"
                     /translation="RTITLDPITVSILKKWEKTRQFLNFPQRVKPTDLVFPAETGNAH
                     SFDYINYNLRCILKKYDLPYITPHGFRHTHCSLLFEAGASIKEVQERLGHEDIKTTMN
                     IYAHVTENTKEKTAEKFAQFLGM"
BASE COUNT          276 a          154 c          166 g          257 t
ORIGIN      
        1 cgtactataa cttgaaaaaa tattaaaaaa ataggtaaaa agacttgcca taagaacaaa
       61 cttttggtaa acttaaatgg ttataatcta tggctcgaaa agagtccatg gcagaaagga
      121 attttaaaat gaaaaaagat atccatccag aatatcgcac tgttgtcttc atggacacaa
      181 ctactggcta caagttcctt agcggttcaa ctaagaaatc taacgaaaca gttgaattcg
      241 aaggtgaaac ttacccattg atccgtgtgg aaatttcatc agactcacac ccattctata
      301 ctggacgtca aaagttcact caagcagatg gacgtgtgga caagttcaac aaaaaatacg
      361 gtctcaaata atcagcgtta taaaatcgtt agaaacgttg atttcaagcc attcccgagc
      421 cgtgggagtg gttttctttt tggaatggta acggaaatgg taacggctga gcgttacatt
      481 cccaaaaatt gggcaaactt ttcagccgtt ttttcttttg tattttccgt aacgtgagcg
      541 taaatattca tagttgtttt aatatcttca tgccctaatc tttcttgtac ttccttaatc
      601 gatgccccag cttcaaataa taaactacaa tgagtatggc ggaaaccgtg gggcgttata
      661 taaggcaagt catatttttt cagaatacaa cgtagattat agtttatata atcaaaacta
      721 tgggcgttgc ctgtttctgc tggaaaaact aggtcagttg gtttcactcg ctgggggaag
      781 tttaaaaact gtctagtctt ttcccatttt ttcagaatag acacggtaat agggtcaagc
      841 gtgatagtgc gct
//
LOCUS       DASFQD010000220          841 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.223, whole genome shotgun sequence.
ACCESSION   DASFQD010000220 DASFQD010000000
VERSION     DASFQD010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 841)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 841)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.223"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(254..421)
                     /locus_tag="U1021_002242"
     CDS             complement(254..421)
                     /locus_tag="U1021_002242"
                     /inference="COORDINATES: protein motif:HMM:NF012948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4712703.1"
                     /translation="MTSETAKPAKRNATKLPNTGETQSGTAGVLSASMLLGAFALLAK
                     RRRKDQEDDEI"
     gene            549..>841
                     /locus_tag="U1021_002243"
     CDS             549..>841
                     /locus_tag="U1021_002243"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712704.1"
                     /translation="MEVPPAFDTIQISDALVEADVLADVEADVLALVEADVLALIEAD
                     VLALVEADVLADVEAEVLALVEADVLADVEADVLALVEADVLALVEADVLALV"
BASE COUNT          209 a          186 c          189 g          257 t
ORIGIN      
        1 attgggcgct taccgaaaac cttgttaaat caacatttta aattttagaa aattagtttt
       61 tagaggtccc catacattgt tattgggcgg ttacaatcct tctacccaaa aaagctctat
      121 aatgtcgtca atggttgaaa ccactagcga attatagagc tatttttgta tgttcttttt
      181 aagttggtcc tgactaaaat ttgcctacct tatttcaatc atcctagttc caactacaga
      241 acaacacatc gtactagatt tcatcgtctt cttgatcctt ccggcgacgt ttagctagaa
      301 gcgcaaaggc tccgagtaac atcgatgcac tcaacacacc tgctgttcca gactgtgtct
      361 cacctgtgtt aggtaacttc gttgcattcc gttttgccgg ttttgcagtt tcagatgtca
      421 tcgcagacat acttgccgac gtggacgccg atgtacttgc gctagttgag acacttatgc
      481 ttgctgacaa cgattgagag gtacttatgg attcagatac cgattgaata tcaatttttg
      541 gtaattccat ggaagtacca ccagcatttg atacaatcca aatctctgac gcacttgtcg
      601 aggcggatgt acttgctgac gttgaagcag acgtgctggc actcgttgag gcagacgtac
      661 ttgcactcat tgaagcagat gtacttgcac ttgttgaagc agacgtgctt gccgatgttg
      721 aggcggaggt acttgcactt gtcgaggcag acgtacttgc cgacgttgag gcagacgtgc
      781 tcgcgctagt tgaagcagac gtgcttgcac tcgttgaagc tgatgtgctt gcacttgttg
      841 a
//
LOCUS       DASFQD010000221          823 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.224, whole genome shotgun sequence.
ACCESSION   DASFQD010000221 DASFQD010000000
VERSION     DASFQD010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 823)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 823)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.224"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..>823
                     /locus_tag="U1021_002244"
     CDS             <1..>823
                     /locus_tag="U1021_002244"
                     /inference="COORDINATES: protein motif:HMM:NF019202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
                     /protein_id="HEM4712705.1"
                     /translation="SYEALYLAHPQNKVAVFDSAKLTTSEKEQVKQNIYDANPNLSTG
                     VAPAIKAIDISDKGEATVTFDDDTVVKVSSATLTYEDKATARSNAKAEIEKEATEKSD
                     AIEASNLTEEEKTARLTEVQDANDRANNAIDKAATTEDLTEAISDGTAAIKAVSTTNT
                     IKTKAKQALEEAYNAKKDEIDNSSLTAEEKVAKQAELDKDKEEATKSIDTATTDDSVH
                     RALTDGKSAITGIDTSTSTKKAQAKQALEEAYNAKKDEIAKSALTAEEKVAKQAEL"
BASE COUNT          318 a          166 c          177 g          162 t
ORIGIN      
        1 tcctatgagg cactgtatct tgcgcatcca caaaacaagg tagctgtatt tgatagtgca
       61 aagttaacaa cttccgagaa agaacaggtc aagcaaaata tatatgatgc aaaccctaat
      121 ttaagtacag gggttgcgcc agccatcaaa gcgattgaca tatccgataa aggtgaagct
      181 actgtaacat ttgatgatga taccgtagtt aaagtttcat ccgcaactct cacctacgaa
      241 gacaaggcta ctgctagaag caatgccaaa gcagaaattg aaaaagaggc aacggaaaag
      301 agtgatgcca tcgaggcctc aaatctcact gaagaagaga aaacagccag actgacggaa
      361 gttcaagatg caaacgaccg agctaataat gcaattgata aagctgctac tactgaagac
      421 ttaactgagg ctatttcgga tggtacagca gcgattaaag cagttagcac aactaatact
      481 ataaaaacaa aagctaagca agctcttgaa gaagcctaca atgctaagaa agatgagatt
      541 gataactcgt ccttgaccgc agaagaaaaa gtagcgaaac aagcagaatt ggataaagat
      601 aaagaggaag ccactaaatc catcgacact gctactacgg atgattctgt acacagggct
      661 cttacagacg gcaaatcagc cattactgga atcgacacaa gcacaagtac taagaaggct
      721 caagctaagc aagctcttga agaagcctac aatgctaaga aagatgagat tgctaagtca
      781 gccttgaccg cagaagaaaa agtagcgaaa caagcagaac tag
//
LOCUS       DASFQD010000222          805 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.225, whole genome shotgun sequence.
ACCESSION   DASFQD010000222 DASFQD010000000
VERSION     DASFQD010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 805)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 805)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.225"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(98..688)
                     /locus_tag="U1021_002245"
     CDS             complement(98..688)
                     /locus_tag="U1021_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HEM4712706.1"
                     /translation="MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIA
                     QLLFLDAQDPTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGTAASMGTIIA
                     SSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKILADNSGK
                     TVKQIHKDAERDYWMSAEETLAYGFIDQIMDNTKVK"
BASE COUNT          226 a          163 c          157 g          259 t
ORIGIN      
        1 atttctgaaa acgaaatttt cttcatgcgt ttggcgtgac ctgtaaaaga gttggagcta
       61 ataggaatag tcagtactat tacatatttg tcactgctta tttgactttt gtattgtcca
      121 taatctggtc aataaatcca taagccaagg tttcttcagc tgacatccag taatcacgtt
      181 ctgcatcctt gtggatttgc ttgactgtct tacctgagtt gtctgccaag attttttcta
      241 gcttattacg tgtttttaat aggtgttctg cagcaatagc catatctgtt tgctgagtac
      301 caccaccagt tccacccatt ggctggtgaa tcatgtactc tgcatttggc aacatgaaac
      361 gtttgccctt ggcaccgctt gatgcaatga tggttcccat gctcgcagct gttcccataa
      421 cgatggtttg aacatcagct ttaatgaaat tcatcgtgtc tacaatggca agacctgctg
      481 acaccgatcc tcctggcgta ttaacataga ggtaaatatc ctttgtaggg tcttgggcat
      541 caaggaaaag caattgtgca atgatagagt ttgccatgtt gtcctcaact ggtcctgtca
      601 acatgataat gcggtctttc aaaaggcgtg agtaaatatc ataagaacgc tcaccacggc
      661 tagtttgttc aataactact ggaatcataa aattactcct tttcgaggtt ttctgtaccc
      721 attatatatg aatagtcaaa attggtcaaa taaaaaacac gatttcagga aatgaaaaag
      781 aaaccagcag agctgatttc ttaat
//
LOCUS       DASFQD010000223          758 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.226, whole genome shotgun sequence.
ACCESSION   DASFQD010000223 DASFQD010000000
VERSION     DASFQD010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 758)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 758)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.226"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            109..182
                     /locus_tag="U1021_002246"
     tRNA            109..182
                     /locus_tag="U1021_002246"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:143..145,aa:Arg,seq:tct)
     gene            complement(180..731)
                     /locus_tag="U1021_002247"
                     /pseudo
     CDS             complement(180..731)
                     /locus_tag="U1021_002247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004194526.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1275 domain-containing protein"
BASE COUNT          268 a          127 c          129 g          234 t
ORIGIN      
        1 tttagaacaa taactagtat aatacatgtg actttgtttg tcaatacatt ttttgatttt
       61 ttattgtatt gacagagtgc tttgtttaat gtaaaataaa atggttaagg ttccatagct
      121 cagctggata gagcattcgc cttctaagcg aacggtcgca ggttcgaatc ctgctggaat
      181 catttagacc tacctcgagt aggtcttttt tcttgccata attcataatt aatatataaa
      241 actggcaaaa tcagaccaat aagggcatat tcttcaaatt ggaaggatag gtgagtagat
      301 atgatgacac ctagcataaa ccctataata gtcaataaga tgtttctacc tgtttttcta
      361 agttctgaat ctttttcaat aagtccttta aaccagagat aagcagcatt tttgacattc
      421 cctgtcatca tcacattggc atacggagca cctcgtaacc ttctaaatgt ttctacttga
      481 atagaggcta cgaaggctag actagcaatt gtaaaagacg caggcataat aggtgagaga
      541 atgatagtta gtaaaataag aactaacatc attacactac taccaaagtg ccaagaccat
      601 gtttgttttt caaaatacct tcttgctaag taggtaaaaa attgtccgaa tacaaaaaat
      661 aaaatgggaa tggaaaaatt aactacctgc gcaaaatcac ctttagctaa aaaataagct
      721 agggaaataa cacaatgtca ttaagttaag catttaaa
//
LOCUS       DASFQD010000224          748 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.227, whole genome shotgun sequence.
ACCESSION   DASFQD010000224 DASFQD010000000
VERSION     DASFQD010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 748)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 748)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.227"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            152..334
                     /gene="rpmF"
                     /locus_tag="U1021_002248"
     CDS             152..334
                     /gene="rpmF"
                     /locus_tag="U1021_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000290417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEM4712707.1"
                     /translation="MAVPARRTSKAKKNKRRTHYKVAAPTVKFDETTGDYSRSHRVSL
                     KGYYKGRKIAKAASAE"
     gene            350..499
                     /gene="rpmG"
                     /locus_tag="U1021_002249"
     CDS             350..499
                     /gene="rpmG"
                     /locus_tag="U1021_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEM4712708.1"
                     /translation="MRVNITLEHKESGERLYLTSKNKRNTPDRLQLKKYSPKLRKHVI
                     FTEVK"
BASE COUNT          278 a          136 c          113 g          221 t
ORIGIN      
        1 acaaattttg acaaattttt tcaaaaaatc tgtcaagtaa ctttacttta caaaaaattt
       61 ttgttatact gttaaagttg acgaaagtca tacgcactat ttttagatta aaaaagggct
      121 tggccctgac atttaatgga ggaagaaaga aatggcagta cctgcacgtc gcacttcaaa
      181 agcgaagaaa aacaaacgtc gtactcacta taaagtagca gctccaactg tgaaatttga
      241 tgaaactact ggagattact cacgttcaca ccgtgtatct ttgaaaggat actacaaagg
      301 acgtaaaatt gccaaggctg cttcagctga ataatagaag ggagatacca tgcgcgtaaa
      361 tattacactt gaacacaaag aatctggtga gcgtttgtac cttacttcaa aaaacaaacg
      421 taacactcca gaccgtcttc aattgaaaaa atactcacca aaattgcgta agcacgtgat
      481 ttttactgag gtaaaataag acaacataca gaaagcctat gaaatcaacg tttcaaaggc
      541 ttttttcttt tgtttttgac aaaataactg aattttaact gattaaaata aatcaaatga
      601 taatttctgc taaatctagc atagcctgtt caatcttacg ttttcctttt tgtattacat
      661 gaagatagat tttcactatc tccttaccat cctcagaatg tcctacaaat tctcgaataa
      721 cattcaaact agtattgata aaacaaaa
//
LOCUS       DASFQD010000225          739 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.228, whole genome shotgun sequence.
ACCESSION   DASFQD010000225 DASFQD010000000
VERSION     DASFQD010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.228"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            270..737
                     /locus_tag="U1021_002250"
     CDS             270..737
                     /locus_tag="U1021_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM4712709.1"
                     /translation="MTIRKARQSDIPILNELLQDILQVHHQARPDIFKSAGQKFSEAE
                     LVALLENPDKPIFVFELEGQVVGHLFCELSTATGDVLEPVKTLFIDDLCVANSARGQR
                     IGEQLYEFALSYAKEQGCHNLTLDVWADNAGAVRFYERQGMKPQKFRMEQIIE"
BASE COUNT          238 a          120 c          158 g          223 t
ORIGIN      
        1 tcaggggagt gactctggga ggttggaaat gaagcaaaaa cattttgcac aaaagaggga
       61 gaagctttag taattttcta cactacacat tctcgtttta agacaacaaa aaaccagcct
      121 tggccagctg attttttagg agatttatga aaaattttag gatacaccta tagtatactc
      181 gaattttcag attcttcatc ggtctgtaga cctattttgt taaaaaatga acatgtgcta
      241 taataataaa aactcaaaag gagagtatta tgacaatccg taaagctaga caatctgaca
      301 ttccgatatt aaatgaattg cttcaagata ttttacaggt gcatcaccaa gcacgaccag
      361 atatttttaa aagtgcaggt caaaaatttt ctgaggctga attagtagca cttttagaaa
      421 atccagataa gcctattttt gtctttgagt tagagggaca agtggttggg catctttttt
      481 gtgaattatc taccgcaaca ggcgatgttt tagaaccagt taaaaccttg tttattgatg
      541 atttgtgtgt agccaattcg gcgcgtggtc aaagaattgg cgagcagctt tatgaatttg
      601 ctctttccta tgctaaggag cagggttgcc acaatcttac cttggatgta tgggctgaca
      661 atgcaggagc tgtccgtttt tatgaacgcc aaggaatgaa accacaaaag ttccgtatgg
      721 agcaaataat agagtgagg
//
LOCUS       DASFQD010000226          726 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.229, whole genome shotgun sequence.
ACCESSION   DASFQD010000226 DASFQD010000000
VERSION     DASFQD010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.229"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..528
                     /locus_tag="U1021_002251"
     CDS             <1..528
                     /locus_tag="U1021_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000974722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEM4712710.1"
                     /translation="HHDKHHATYVANANAALEKHPEIGEDLVALLSDVEQIPADIRQA
                     LINNGGGHLNHALFWELLSPEKTEISAELAADIDATFGSFDAFKEAFTTAATTRFGSG
                     WAFLVVNKEGKLEVISTANQDTPIMQGLKPILALDVWEHAYYLNYRNVRPNYIKAFFE
                     VINWDKVNELYKAAK"
BASE COUNT          239 a          133 c          144 g          210 t
ORIGIN      
        1 caccatgaca agcaccatgc aacttatgtt gcaaatgcta atgcagccct tgaaaaacac
       61 ccagaaatcg gtgaagactt ggtagcactt ttgtcagatg tggagcaaat tccagctgat
      121 atccgtcaag cccttatcaa caacggtggc ggtcacctta accatgcact tttctgggaa
      181 ttactttcac cagaaaaaac agaaatttca gctgaattag cagcagatat tgatgcgacc
      241 ttcggttcat ttgatgcctt caaagaagcc tttacaactg cagcaacaac tcgcttcggt
      301 tcaggttggg ctttcttggt tgtcaacaaa gaaggcaagt tagaggttat ctcaacagct
      361 aaccaagaca cacctatcat gcaagggttg aaaccaatct tggcattgga tgtttgggaa
      421 catgcttatt acctcaacta ccgtaacgtc cgtccaaact acatcaaagc cttctttgaa
      481 gtaattaact gggacaaggt caacgaactt tataaagcag ctaaataaga acagttctct
      541 tccgtttgga agagattttt tagttgtgag gagtattttg aagagaattg tgtaagggaa
      601 gagggatgat ttttcgtatt atgtataaaa ataacaagat atttttcaga aaaatgatgt
      661 aaaagtaaga ataaacgaat atttttatac ttttttgtta taaatgactg atttgatatt
      721 gaaaag
//
LOCUS       DASFQD010000227          695 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.230, whole genome shotgun sequence.
ACCESSION   DASFQD010000227 DASFQD010000000
VERSION     DASFQD010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 695)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 695)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.230"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            49..456
                     /locus_tag="U1021_002252"
     CDS             49..456
                     /locus_tag="U1021_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEM4712711.1"
                     /translation="MHILIAPDSFKESLSATKVAEAIKKGFSKVYPQAGYDLIPLGDG
                     GEGTVESLMQALSLDGTQTWVTGPFGDKIKVSYAVKDDLPEFPFENICVAFPIIASVE
                     SLEDTLQKAEKNLVRTAEQVARILQLGGQQRWN"
     gene            447..677
                     /locus_tag="U1021_002253"
     CDS             447..677
                     /locus_tag="U1021_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014917285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712712.1"
                     /translation="MELVKSMAIILFIFICLAKLVFVRRLSKKERGTETNVIKANGAM
                     FFFNEKNERGRLLGILCLTCIIFTLIFILLYR"
BASE COUNT          225 a          114 c          146 g          210 t
ORIGIN      
        1 tgtccttttc ctaattcaaa taactataat ataaaggagg ttagtatcat gcatattctc
       61 attgctccgg attcatttaa agagtctctt tcagctacaa aggttgctga agcgattaaa
      121 aaaggatttt ctaaggttta cccacaagca gggtatgact taattcccct aggagatggt
      181 ggcgaaggga cagttgagag tctaatgcag gccttatcct tggatggaac ccagacttgg
      241 gtgacaggtc catttggaga taaaatcaag gtttcctatg cggttaaaga tgatcttccc
      301 gagtttcctt ttgaaaatat ctgcgtcgct tttccgataa ttgcaagcgt tgaaagtttg
      361 gaggacacgc ttcaaaaagc agaaaaaaac ctggtccgca cggcagagca ggtggcaaga
      421 attcttcagt taggaggcca acaaagatgg aattagtgaa atctatggct attatcttat
      481 ttatttttat ttgtcttgca aagctagtat tcgttaggag actttccaaa aaagaaagag
      541 gaacggaaac gaatgtaata aaggcaaatg gagcaatgtt ctttttcaat gaaaaaaatg
      601 aaagaggcag attgctagga atcctttgtc taacctgtat tatttttact ttaatattta
      661 tactgcttta tcgataaata agtctaacca aataa
//
LOCUS       DASFQD010000228          694 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.231, whole genome shotgun sequence.
ACCESSION   DASFQD010000228 DASFQD010000000
VERSION     DASFQD010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.231"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(27..>694)
                     /locus_tag="U1021_002254"
     CDS             complement(27..>694)
                     /locus_tag="U1021_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014635840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM4712713.1"
                     /translation="VSDKAPDITVFKRLVDKALFTRSYDQLAYLVEAEKQKEAVHSQE
                     SSEYLTYLACIVDFHHYHKEDIAIVRMEELSHRISKKSSFYLDVCNSLVNFYALTSRD
                     EDLDGLYEGISEKLSHLDISNTESFHKYIKIRYNHAHYLFKRKRQSQAIDELTDLIET
                     LRAKKSCYLLADTLCLIANVGEGFLSKDEILSYYREAECLFKFFGPQNSYLSLKEYLL
                     KDI"
BASE COUNT          228 a          144 c          100 g          222 t
ORIGIN      
        1 tttataaaag aatctatact tgattattaa atatctttta atagatattc tttcaagcta
       61 agataactat tttgcggacc aaaaaatttg aatagacatt ccgcttctcg atagtaggag
      121 agaatctcat cttttgacaa aaatccctct ccgacatttg cgattaaaca aagcgtatca
      181 gccaaaagat aacaactctt cttagctcgc aatgtttcaa ttaggtctgt caattcatca
      241 attgcctgtg actgcctctt ccttttaaaa agatagtgag cgtgattgta gcgaatcttg
      301 atatacttat gaaaactctc tgtgtttgat atatccaagt ggctaagttt ttctgaaatc
      361 ccctcataca aaccgtctaa atcctcatct cgagaagtca aggcataaaa attaaccaag
      421 ctattgcata catccagata aaaactagat ttcttactga ttcgatgact aagttcttcc
      481 atacgtacaa ttgcaatatc ctccttatga taatgatgaa agtccactat acaagccaga
      541 taagttaaat attcactact ttcctgcgaa tgaacagctt ctttctgctt ctctgcctct
      601 acaagataag ccagttgatc ataggaacga gtgaacaaag ctttgtccac caatcgttta
      661 aataccgtaa tatcaggcgc tttatctgat acac
//
LOCUS       DASFQD010000229          679 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.232, whole genome shotgun sequence.
ACCESSION   DASFQD010000229 DASFQD010000000
VERSION     DASFQD010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 679)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 679)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.232"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..>679
                     /locus_tag="U1021_002255"
     CDS             <1..>679
                     /locus_tag="U1021_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEM4712714.1"
                     /translation="PTVEDEQVKEYIRMRTDHKVALKKIKQQILAFCLRHDFRYTEGS
                     SNWTQKHVRWLRSLNPDGLYAEILTEYLLTYEKLVDQIERYDARIEQLGQSDSYQEKV
                     SRLSCFIGIKTLTALSIVTEIGDFNRFATAQHFASYLGLTPSENSSGDKERRGAITKA
                     GNSHVRRLLIEAAQSLAKGTIGYKSKELKRRQSGNRVEVIAYADKANERLRRRYRTLV
                     LGKNKKQN"
BASE COUNT          226 a          129 c          154 g          170 t
ORIGIN      
        1 tcctactgtt gaggatgaac aagtcaaaga atatatccgc atgagaacag accacaaagt
       61 ggctctgaag aaaatcaaac aacaaattct tgccttctgt ctccgacatg attttcgcta
      121 taccgaggga agcagtaatt ggacacagaa acatgtccgc tggctccgtt ccctaaatcc
      181 tgatggactt tacgcagaga ttttgacaga atatctattg acctatgaga aattagtaga
      241 tcaaatagaa cggtatgatg cacgaattga gcaactgggt caaagcgaca gttatcaaga
      301 gaaggtctca cggctttctt gctttattgg cattaaaaca ctaactgctc tttccattgt
      361 gacagaaatc ggtgatttta atcgctttgc gacagctcaa cattttgctt cttatcttgg
      421 gctaactcct agcgaaaatt ctagcggcga caaggagaga agaggtgcta tcaccaaagc
      481 tgggaatagc catgtgagac gacttctgat agaagctgca caatcattgg ctaaggggac
      541 gattgggtat aaatccaaag aattgaaaag gagacaaagt ggaaaccgag tggaggtgat
      601 tgcttatgcg gataaggcta atgaacgctt aagaagacgt tatcgcacac ttgttctagg
      661 aaaaaataag aaacaaaat
//
LOCUS       DASFQD010000230          671 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.233, whole genome shotgun sequence.
ACCESSION   DASFQD010000230 DASFQD010000000
VERSION     DASFQD010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.233"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..632
                     /locus_tag="U1021_002256"
     CDS             <1..632
                     /locus_tag="U1021_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939803.1"
                     /note="similar to YegS from E. coli; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEM4712715.1"
                     /translation="FHQEHYFINIAAAGTLTELTYSVPSQLKTMFGYLAYVVKGAELL
                     PQVQFTPVRVEHDEGVFEGSVSMIFVALTNSIGGFEQIVPDAKLDDGNFTLLMVKTGN
                     LFEILHLIRQVLDGGKHIESDLVEYIKTKSLSIENLNPDNRLLLNLDGEFGGEAPVRL
                     YNLSNHIEFFADTDLVSDHAITLDTDQMNREDMAKRFIEETDHIDEAIK"
BASE COUNT          208 a          119 c          135 g          209 t
ORIGIN      
        1 gttttcatca agaacattat tttatcaata ttgctgcggc aggtacactt acggaattga
       61 cctacagtgt tcccagtcaa cttaagacca tgtttggcta tttggcctat gtagtaaaag
      121 gagcagagct cctgccacaa gtacaattta cacctgttcg tgtagagcat gacgagggag
      181 tatttgaagg ctcggtttca atgatttttg ttgccttaac caattcaatt ggtggttttg
      241 aacagattgt tcccgatgct aaattagatg atggtaattt taccttattg atggttaaaa
      301 cagggaattt atttgaaatt ctgcatctga ttcgtcaagt cttagacggt ggcaaacaca
      361 ttgagagtga tttagttgaa tacataaaaa ccaagagcct atctatcgaa aatctgaacc
      421 cagataaccg tctactgctc aatctagatg gagagtttgg tggggaagcc cctgttcgtc
      481 tgtacaacct atcaaaccat atagagtttt tcgcagatac agatctggtt tctgaccatg
      541 caatcactct tgatactgat cagatgaatc gagaagatat ggccaaacga ttcattgaag
      601 aaacagacca tattgatgaa gctattaaat aggaagaaaa gatgaaatac tcttttcttt
      661 ttattttaca a
//
LOCUS       DASFQD010000231          613 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.234, whole genome shotgun sequence.
ACCESSION   DASFQD010000231 DASFQD010000000
VERSION     DASFQD010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 613)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 613)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.234"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            28..498
                     /locus_tag="U1021_002257"
     CDS             28..498
                     /locus_tag="U1021_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEM4712716.1"
                     /translation="MEFEKVYASVKGIVNKARKEFYIKLWDRDDWEQEGMMTLFELLE
                     DQPWLVDEQVQLYCYFKVKFRNRIKDRIRKQESQKRKFDRMPHEDIHELSHAIQSPGL
                     INDELLMLRGALRDYRKNLSNDQLDKYEKLISGQCFNGRREMIRDLQIHLKDFR"
BASE COUNT          236 a           87 c          128 g          162 t
ORIGIN      
        1 aaaccatcaa caaaaggaga ttaagaaatg gaattcgaaa aagtgtacgc aagcgtcaaa
       61 ggcattgtaa acaaggctcg aaaagagttt tacattaaac tatgggatcg agatgattgg
      121 gaacaagaag gaatgatgac cttgtttgaa ttgttggaag atcaaccgtg gctagttgat
      181 gaacaagttc aattatattg ttatttcaaa gtcaagttca gaaatcgaat caaggatcgt
      241 atccgcaaac aggaaagtca aaaacgcaag tttgaccgta tgccacatga agatattcac
      301 gaattatctc acgcaataca atcaccggga ttgataaacg atgaattatt aatgttgaga
      361 ggtgccttga gagattatcg aaaaaatctg agcaatgatc aacttgataa atacgaaaaa
      421 ttaattagcg gacaatgttt taatggtcgc cgtgaaatga tacgtgattt acaaattcat
      481 ttgaaagact ttcgctaaag ctagttacta acatcacgtt aatcgaatta agaaattggg
      541 cagaagcacc ataaaaagtt ctgttcagtt tctttttata taggttatag caaagagaag
      601 aaggaatagg aga
//
LOCUS       DASFQD010000232          612 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.235, whole genome shotgun sequence.
ACCESSION   DASFQD010000232 DASFQD010000000
VERSION     DASFQD010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.235"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            30..>612
                     /locus_tag="U1021_002258"
     CDS             30..>612
                     /locus_tag="U1021_002258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014411893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HEM4712717.1"
                     /translation="MRYPLSTILFLVFTCQLAGIETWKEMEDFIEMNESILGEYVDLS
                     AGCPSHDTLERVVSMVNPDFIKELKLSFEASSETTDFSKLIAVDGKTIRGNRGKHQSP
                     THIVTAYDGGNRISLGQVAVEDKSNEITAIPRLLRQLDLRKSVVTIDAMGTQTDIADV
                     IIRGKGDYCLAVKGNQGTLHEDIDLYFSDAKLLS"
BASE COUNT          182 a          113 c          142 g          175 t
ORIGIN      
        1 aagaatacga tagccgtcaa gcttggaaaa ttcgctatcc cttatccact attctgtttc
       61 tggttttcac atgtcaatta gcagggattg aaacgtggaa agagatggag gatttcatag
      121 aaatgaacga atctatcttg ggagaatacg ttgacttgag tgctggttgt ccttctcatg
      181 acaccttgga acgtgttgtg agtatggtta atccagattt cataaaagaa ctgaaactgt
      241 cctttgaagc tagttcggaa acaactgatt tttcaaaatt gattgccgtt gacggaaaaa
      301 cgattcgagg gaaccgaggg aaacatcaat ccccaactca tattgtcact gcttatgatg
      361 gtggtaatcg gattagcctt ggacaggtag ctgttgagga taaaagcaat gaaatcacag
      421 ccattcctcg cctcttgcgt cagctagacc ttcgtaagag tgttgtcaca attgatgcca
      481 tgggcaccca gacagacatt gcggatgtga ttataagggg caaaggagat tattgcttgg
      541 cagtcaaagg aaatcaaggc actctccatg aggatattga cctttatttt agtgatgcca
      601 aattattatc ta
//
LOCUS       DASFQD010000233          596 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.236, whole genome shotgun sequence.
ACCESSION   DASFQD010000233 DASFQD010000000
VERSION     DASFQD010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 596)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.236"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(17..>596)
                     /locus_tag="U1021_002259"
     CDS             complement(17..>596)
                     /locus_tag="U1021_002259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012677391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS30 family transposase"
                     /protein_id="HEM4712718.1"
                     /translation="FLTEKGSSYWLEMDTVTGRIGGKVLLTFNLSFCNFIFARLLDNK
                     TANEVAKHLYAIKNTLHQKEMDFCELFPVILTDNGGEFARVDDIEMDVRGESKLFFCD
                     PNRSDQKGRIEKNHTLIRDILPKGSSFDNLTQEDINLVCSHVNSVRRASFNGKSAYEF
                     FTFTYGDELATLLGISKIDPENVIQSSRLLDK"
BASE COUNT          169 a          121 c          129 g          177 t
ORIGIN      
        1 tgataaaaac tagcgattat ttatccaata atcgagatga ttggatgacg ttctcagggt
       61 caattttaga gattcccaaa agtgttgcca attcatcacc gtaggtaaat gtaaagaatt
      121 cataggcgga ttttccgttg aaagaagctc gtctgacgct gttgacatgc gaacaaacca
      181 ggttgatgtc ctcctgtgtc aagttgtcaa aagaacttcc tttaggaaga atatctctga
      241 taagtgtgtg attcttctca attctccctt tctggtcaga acgatttggg tcacagaaga
      301 atagcttaga ttctccacga acatccattt cgatatcgtc cactctagcg aattccccgc
      361 cattatcggt cagaatgaca gggaatagtt cgcagaagtc catctctttc tgatgcaggg
      421 tattcttgat agcgtagaga tgtttagcga cctcattagc tgttttgtta tcaagtaatc
      481 gagcgaagat aaagttacag aaggagaggt taaaggtgag aagtaccttt ccaccgatcc
      541 gtccagtaac ggtgtccatt tccagccaat agctgcttcc tttctctgtg agaaag
//
LOCUS       DASFQD010000234          550 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.237, whole genome shotgun sequence.
ACCESSION   DASFQD010000234 DASFQD010000000
VERSION     DASFQD010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.237"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            112..>550
                     /locus_tag="U1021_002260"
     CDS             112..>550
                     /locus_tag="U1021_002260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013730449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1694 domain-containing protein"
                     /protein_id="HEM4712719.1"
                     /translation="MNDLNTTILQKASSETRLNPDEQRLYMGTYRERVVLLVSFDDLS
                     SEVVGNKFDTICQKLANSYSPLFLKLSPALSDKQQISLLKIAQNFGITTAIIDEKIGQ
                     SPYALVFHTNHAVDNEEVSLESIFPNLISKPEEKKEDVKPSFWK"
BASE COUNT          192 a          121 c           91 g          146 t
ORIGIN      
        1 tcaaagtaac ttctggaagg acgggaacta gaacttactt tgagaattta ccaaagaaat
       61 aatgtaaacg ccttcctttt caaagttaac tgagtatgtt atactgaaac tatgaacgat
      121 ttaaatacta ccatactaca gaaagcctct agcgaaacac gattgaatcc agatgaacag
      181 cgtctataca tgggaaccta tcgtgaacgg gttgtcctgc tcgtttcctt tgacgatttg
      241 agtagtgaag tcgtcggaaa taagttcgat acaatttgcc aaaaactagc aaacagctac
      301 tctcctctat tcctcaaact ctcgccagcc ctgtctgaca agcaacaaat ttcactacta
      361 aaaattgctc agaacttcgg cattactacc gctatcatcg atgaaaaaat agggcaatct
      421 ccctacgcac ttgtctttca cacaaatcac gctgtggata atgaagaagt tagcttagaa
      481 tccatatttc caaatcttat ctcaaaacca gaagaaaaaa aggaagatgt aaaaccttcc
      541 ttctggaaaa
//
LOCUS       DASFQD010000235          538 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.238, whole genome shotgun sequence.
ACCESSION   DASFQD010000235 DASFQD010000000
VERSION     DASFQD010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.238"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..300
                     /locus_tag="U1021_002261"
     CDS             <1..300
                     /locus_tag="U1021_002261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain protein"
                     /protein_id="HEM4712720.1"
                     /translation="KNIIFEKLKEAFGEMAISETVTQEVEDLLKVHGQRLVLYALDET
                     ILNGGRSIRYTRSILERWQGQGLKTIEQVKQNKADFEAMKQPRQDNSDNFPEVPF"
BASE COUNT          189 a          104 c          126 g          119 t
ORIGIN      
        1 aaaaatatca tctttgaaaa actcaaagaa gcatttgggg aaatggcgat tagtgaaact
       61 gtcacccaag aagtcgaaga cctattaaag gttcatggcc aacgcttggt attgtatgct
      121 ttagacgaaa ctatcctgaa tggtgggagg tcaatcagat atacccgttc tattctggaa
      181 cgctggcaag gtcaaggtct gaagactatc gaacaagtca agcagaacaa agcagatttt
      241 gaagcgatga aacaacctag gcaagataat tcagacaatt tcccagaagt gccattttag
      301 aaaggggaca ggaattgaga aatccatttc agaatttaca gcaccttaga cagttagaag
      361 cgacttgccc actacataac atcccattag tccaacttga tagagctgtc aaggtggttg
      421 gagaagacaa accacggaag ctagagcctt tttgtcctga gtgcgagcaa gaacaaaagc
      481 aacaacaggg acaaagggca gtagaagagc atttgaacgc tgggctttac tcaaggac
//
LOCUS       DASFQD010000236          514 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.239, whole genome shotgun sequence.
ACCESSION   DASFQD010000236 DASFQD010000000
VERSION     DASFQD010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.239"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(268..459)
                     /locus_tag="U1021_002262"
     CDS             complement(268..459)
                     /locus_tag="U1021_002262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011922214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712721.1"
                     /translation="MSNDFGLWYNSFGKGIERQLNPSIVSFRFRETTSNSLPDCLNIL
                     KTGQMKITVNLLVHSVKVS"
BASE COUNT          164 a          104 c           90 g          156 t
ORIGIN      
        1 aactagaaat aaagacttgg tgacgaactc ttttttgaca agttgagttc tttcccactc
       61 cctaaaagtt gcactaattc gatttttgaa aaatattgtt tcaaaaatct catgtcgatg
      121 ccagagacaa tcagcatctc tattgatttt actctaacta atgtctgtcg cagaagcctt
      181 cgggctgatg tttcagttta gcacgttgct aatcgtgcta ctgacattta tttttaacaa
      241 tcgtaaaaaa taaaagacag ccaaccgcta cgaaactttg accgagtgaa ctagcaggtt
      301 gactgtaatc ttcatttgtc ccgtctttaa aatgttcaaa cagtctggga gactgtttga
      361 ggtcgtttct cgaaaacgga aggaaacgat actgggattg agttggcgct caatcccttt
      421 tccaaaacta ttataccaca aaccaaaatc gtttgacaat tttttatcta catcatcaaa
      481 aacggcttga cagcctaaga aaaggagaat acca
//
LOCUS       DASFQD010000237          512 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.240, whole genome shotgun sequence.
ACCESSION   DASFQD010000237 DASFQD010000000
VERSION     DASFQD010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.240"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..>512
                     /locus_tag="U1021_002263"
     rRNA            <1..>512
                     /locus_tag="U1021_002263"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          145 a          115 c          142 g          110 t
ORIGIN      
        1 aagcttctag cgatgtatca tactctaccc gtaccgcaaa ccgacacagg tagtcgaggc
       61 gagtagcctc aggtgagcga gagaactctc gttaaggaac tcggcaaaat gaccccgtaa
      121 cttcgggaga aggggtgctg acttaaagtc agccgcagtg aataggccca agcaactgtt
      181 tatcaaaaac acagctctct gctaaatcgt aagatgatgt atagggggtg acgcctgccc
      241 ggtgctggaa ggttaagagg agggtttagc gcaagcgaag atctgaattg aagccccagt
      301 aaacggcggc cgtaactata acggtcctaa ggtagcgaaa ttccttgtcg ggtaagttcc
      361 gacccgcacg aaaggcgtaa tgatttgggc actgtctcaa cgagagactc ggtgaaattt
      421 tagtacctgt gaagatgcag gttacccgcg acaggacgga aagaccccat ggagctttac
      481 tgcagtttga tattgagtat ctgtaccaca tg
//
LOCUS       DASFQD010000238          506 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.241, whole genome shotgun sequence.
ACCESSION   DASFQD010000238 DASFQD010000000
VERSION     DASFQD010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.241"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..>506
                     /locus_tag="U1021_002264"
     CDS             <1..>506
                     /locus_tag="U1021_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEM4712722.1"
                     /translation="YEQDPEKVELFLKELNNLSHLTPVYIDETGFETCFHREYGRSLK
                     GQLIKGKVSGRRYQRISLVAGLINGALIAPMTYKDTMTSGFFEAWFKTFLLPTLAKPS
                     VIIMDNAKFHRMSKLKDLCEEQGHRLLPLPPYSPEYNPIEKIWAHIKKHIRRVLTNCD
                     TFLEVLSS"
BASE COUNT          163 a           96 c          102 g          145 t
ORIGIN      
        1 tatgaacaag accctgaaaa agtagaactg ttccttaaag aattgaataa cttaagccac
       61 ttgactcctg tttatattga cgagacaggg tttgagacat gttttcatcg agaatatggt
      121 cgctctttga aaggtcagtt gataaaaggt aaggtctctg gaagaagata ccagcggata
      181 tctttagtgg caggtctcat aaatggtgcg cttatagccc cgatgacata caaagatact
      241 atgacgagtg gctttttcga agcttggttc aaaacattct tactacccac tttagctaaa
      301 ccatctgtta tcatcatgga caatgcaaag tttcatagga tgagtaagct aaaagattta
      361 tgcgaggagc agggacatag acttttacca cttcctcctt actcaccgga atataatccc
      421 attgagaaaa tatgggctca catcaaaaaa cacatcagaa gagtattgac aaattgcgat
      481 acttttcttg aggtactttc gtcctg
//
LOCUS       DASFQD010000239          499 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.242, whole genome shotgun sequence.
ACCESSION   DASFQD010000239 DASFQD010000000
VERSION     DASFQD010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.242"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..365
                     /locus_tag="U1021_002265"
     CDS             <1..365
                     /locus_tag="U1021_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012775059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4712723.1"
                     /translation="THIYKKTPAKKVVTNHVDEEGNPIAPQEDGTTPKRQISGYEYVR
                     TVVDEEGNTTHIYRKLSNKPTTPEKETPAKPQAGKTASGKAQLPNTGEASSVAGALGT
                     AMLVATLAFARKRRRNED"
BASE COUNT          171 a          107 c           99 g          122 t
ORIGIN      
        1 caactcacat ctacaagaaa acacctgcta agaaagttgt gactaaccac gttgatgaag
       61 aaggtaaccc tattgctcca caagaggatg ggacaacacc aaaacgtcaa atttcaggtt
      121 acgagtatgt gcgtactgta gttgatgaag aaggtaacac gacacatatt tatcgcaaac
      181 tttctaataa accaacaaca cctgagaagg aaactcctgc aaaacctcaa gcaggtaaaa
      241 ccgcttcagg taaagctcaa ttgccaaata ctggtgaggc ttcatctgtg gcaggtgcgc
      301 ttggtacagc aatgcttgtc gcaacacttg cgtttgcaag aaaacgtcgt cgtaacgaag
      361 attagtcaaa attctttata cagactttat tcccccatat agaaagtata agaattgtac
      421 gtaacatgca ggattgcctt tccgaaaaaa tgaggctgtg caaaaagtcc agagttacat
      481 cttagagttc gctccattt
//
LOCUS       DASFQD010000240          485 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.243, whole genome shotgun sequence.
ACCESSION   DASFQD010000240 DASFQD010000000
VERSION     DASFQD010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.243"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            1..222
                     /locus_tag="U1021_002266"
                     /pseudo
     CDS             1..222
                     /locus_tag="U1021_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935801.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          134 a          100 c          109 g          142 t
ORIGIN      
        1 actaaaggcc tacgtgcttg ccacgatttt ctcagtcaat ttcatgtgga agctgttggt
       61 atggaaagca caggtgttta ttggcgacct gtctggcatg ctatatgtga tgacttcaag
      121 ttgatactcg ctcaaccagc caacatgaag gctattccag aacagaaaac cgacaagaag
      181 gatgctcact ggatagccaa attaacacgg attggtctgc tttaggtatt cgcagtgtat
      241 cgagaatagc tagcctatgg attcttcaaa actgtccgct gtataaaaaa cgaccttatc
      301 cctcctaaac aagtagggac aaggtcgtga ctggaacagc cgcttttgtc atatttatag
      361 tcttttaatt tacttttagt actcgcttca aaggtttggg ggaacctttg aaggctggag
      421 atagtgcgaa ccaagttcgc ttcaacagtc gcaggcataa ctcaatgctt ttttatttct
      481 aggtg
//
LOCUS       DASFQD010000241          477 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.244, whole genome shotgun sequence.
ACCESSION   DASFQD010000241 DASFQD010000000
VERSION     DASFQD010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.244"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..>477
                     /locus_tag="U1021_002267"
     CDS             <1..>477
                     /locus_tag="U1021_002267"
                     /inference="COORDINATES: protein motif:HMM:NF019202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1542 domain-containing protein"
                     /protein_id="HEM4712724.1"
                     /translation="IDTAPDASGVAKALEDGKSAIDAINTITSAEKAAAKQALEEAYN
                     AKKAEIENSALTAEEKATKQAELDKAKADADKAIDAATDDAGVAKALEASKSAIDAIN
                     TTTSAEKAAAKEALEEAYNAKKAEIANSGLTAEEKAAKQAELDKAKEDADKAIDAAT"
BASE COUNT          185 a           97 c          109 g           86 t
ORIGIN      
        1 attgacacag caccagatgc ttcaggtgta gctaaagctc ttgaagatgg taaatcagcg
       61 attgacgcga tcaatacaat tacaagtgct gagaaagcag ccgctaagca agctcttgaa
      121 gaagcctaca acgctaagaa agcagaaatt gaaaattctg cccttacagc tgaagaaaaa
      181 gccacaaaac aagcagaatt ggataaagct aaagctgacg cagataaggc tattgatgcc
      241 gcaactgatg atgcaggcgt agctaaagct cttgaagcta gtaaatcagc gattgacgca
      301 atcaatacaa ctacaagtgc tgagaaagca gccgctaagg aagctcttga agaagcctac
      361 aacgctaaga aagcagaaat cgccaattca ggtttgactg cagaagaaaa agccgcaaaa
      421 caagcagaat tggataaagc caaagaggat gcagataaag ctattgatgc cgcaaca
//
LOCUS       DASFQD010000242          455 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.245, whole genome shotgun sequence.
ACCESSION   DASFQD010000242 DASFQD010000000
VERSION     DASFQD010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.245"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..>455
                     /locus_tag="U1021_002268"
     CDS             <1..>455
                     /locus_tag="U1021_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEM4712725.1"
                     /translation="FYQNLTEDIVRAKNRLHKVLQVTFPELETILSTPTGEQYGNLVV
                     AFPCKDFVLDLSKDELSESIRQSTSKRISDKRVAYLAEKLIALANQSYCAVKKTSPML
                     EEVRYYAQELLRLSERRKAVLDQMVELAQPLPEYDILLSIPGIAETTAT"
BASE COUNT          130 a          109 c           95 g          121 t
ORIGIN      
        1 ttctatcaga acttaactga ggacattgtt cgggctaaaa accgcctaca caaggtccta
       61 caggtcactt tcccagagtt ggagactatc ttatcaacgc caactgggga acaatacggg
      121 aacttagtcg tagcctttcc ttgcaaggac ttcgttcttg atttaagcaa ggacgaactc
      181 tcagagagca tccgtcagtc cacttcaaaa cgcatatctg acaagcgtgt ggcttactta
      241 gctgagaaac ttatagcact agctaatcag tcttattgtg ccgttaagaa aacctctcca
      301 atgctggaag aggtccgtta ttatgctcag gaattgctca gactttctga acgcaggaaa
      361 gctgtcctag accaaatggt ggaactagct caacctttac cagaatatga cattctgctt
      421 tctattcctg gtatcgctga gacgactgca acaag
//
LOCUS       DASFQD010000243          444 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.246, whole genome shotgun sequence.
ACCESSION   DASFQD010000243 DASFQD010000000
VERSION     DASFQD010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.246"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..264
                     /locus_tag="U1021_002269"
     CDS             <1..264
                     /locus_tag="U1021_002269"
                     /inference="COORDINATES: protein motif:HMM:NF012948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM4712726.1"
                     /translation="IDVATDASGVAKALEAGKSAIAGIDTSTSAKKAQGKQDLEVAYN
                     AKKADAKKKSVLPNTGDNIGLSSILGVSGLALLGIAIRKKRED"
BASE COUNT          144 a           73 c          110 g          117 t
ORIGIN      
        1 attgatgtcg cgacagatgc ttcaggtgta gctaaagctc ttgaagctgg caaatcagcg
       61 attgctggaa tcgacacaag cacaagtgct aagaaggcgc aaggtaagca agacttggaa
      121 gtagcttaca acgctaagaa agcagatgct aagaaaaaat cagttcttcc taacactggt
      181 gacaatattg gtttatctag catcttgggt gtgtctggtc tagctttatt aggaatcgcg
      241 attcgtaaaa aaagagaaga ttaactattg ttcaaagcat actaagatta gtggtgagga
      301 aatctctgtt gggagagaca aaaaagtagg ctctttgtca actgtagtgg gtagatgaaa
      361 agctaacacc tagagaggac gaagttcgtc ctctctttct ttatggtaac cgcccaataa
      421 caaggtatag tggtttgaat tagg
//
LOCUS       DASFQD010000244          437 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.247, whole genome shotgun sequence.
ACCESSION   DASFQD010000244 DASFQD010000000
VERSION     DASFQD010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.247"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..>437
                     /locus_tag="U1021_002270"
     CDS             <1..>437
                     /locus_tag="U1021_002270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712727.1"
                     /translation="DDYVPTPYYPDNQPPVVEVSEQSVDRAGKKTIDVSTGVAVMHLR
                     YDIDPSATTVIYKVEDLQDDIVYQGSNPKVPVEILVRGIYFVTVTVTDSAGASTEETY
                     RLDVTDSNFISNSVSASASTSASTSASTSASTSASTSASTSAST"
BASE COUNT          130 a          101 c           93 g          113 t
ORIGIN      
        1 gatgattacg ttccaactcc ctactaccca gataaccaac cacctgtagt ggaggtttct
       61 gagcaatccg ttgaccgtgc tggaaaaaaa acgattgacg tctccactgg tgttgctgtg
      121 atgcatctga gatatgacat agacccttct gcaaccactg ttatctataa ggtagaggat
      181 ttacaagatg atattgttta tcaaggaagc aatccgaaag tcccagtaga gattttagta
      241 agaggaatct attttgtaac tgtaacagtg acagattccg ccggtgctag cactgaggaa
      301 acgtatcgtt tagatgttac tgacagtaat tttatatcta actcagtatc agccagcgca
      361 agtacgtccg cgtcaaccag cgcaagtact tcagcatcga cgtcagcaag cacctctgca
      421 tcaaccagcg caagtac
//
LOCUS       DASFQD010000245          432 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.248, whole genome shotgun sequence.
ACCESSION   DASFQD010000245 DASFQD010000000
VERSION     DASFQD010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.248"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..>432
                     /locus_tag="U1021_002271"
     CDS             <1..>432
                     /locus_tag="U1021_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEM4712728.1"
                     /translation="KPDKDKDLKAEIQAIYDENKGNYGYRRIHLELRNRGFSVNHKKV
                     QRLMKELGLTARIRRRKRYKSYKGDVGKKAPNLIERAFEGAKPFEKCYTDVTEFALPN
                     CAEKLYLSPVLDGYNSEIIDFTLSRSPNLIQVKTMLEKVFPE"
BASE COUNT          137 a           83 c           94 g          118 t
ORIGIN      
        1 aaaccagata aagataagga cttaaaagct gaaattcaag ccatttatga tgaaaataag
       61 ggaaattatg gctaccgtcg cattcacctt gagctaagaa atcgtggatt ttctgtcaac
      121 cacaagaaag tacaacggct gatgaaagag ttaggtttga ctgctcgtat tcgtagacgc
      181 aagagataca agtcttacaa gggtgatgtg ggcaagaaag ctcctaatct cattgagaga
      241 gcctttgaag gggctaagcc ttttgagaag tgctatacag atgtgactga gttcgctctg
      301 ccaaattgtg ctgaaaaact ctatctttct ccagttctgg atggctataa tagcgaaatt
      361 attgatttta ccttatcccg ctctccaaac ctcatacaag tcaagaccat gcttgagaag
      421 gtctttcctg ag
//
LOCUS       DASFQD010000246          386 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.249, whole genome shotgun sequence.
ACCESSION   DASFQD010000246 DASFQD010000000
VERSION     DASFQD010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.249"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
BASE COUNT          117 a           88 c           65 g          116 t
ORIGIN      
        1 tcaagtaaaa acaatcgaac tgattaaaaa atgaaaagta tctagaaaga gcctagttct
       61 tagcttcggg cattggccac tctgatattc gtggattggt tacctacagg tcaatggttc
      121 tgccgcgagt cctactctct ataagcgtgg atcacaattg tgccacttag tcatttcgta
      181 gatgactcaa accttgaagt cctaaactcc ttcaagatac tttccattca aacatgattt
      241 caatccttat ttctgtccaa attcacccag tgattttgga tagaaatagg gattcctcat
      301 cgctctgcga tgataaaact taatggtcaa aagtgtacat gaaaacaagc gctaacttca
      361 agctattctt cctgtcatca tccccc
//
LOCUS       DASFQD010000247          373 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.denovo.250, whole genome shotgun sequence.
ACCESSION   DASFQD010000247 DASFQD010000000
VERSION     DASFQD010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.denovo.250"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            complement(<1..328)
                     /locus_tag="U1021_002272"
     CDS             complement(<1..328)
                     /locus_tag="U1021_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEM4712729.1"
                     /translation="MFHFTTLFIGMDVHKESFSLCYYDMMANQFKHSTKVGPNVSYIV
                     NYVNELRRLYGQDAEVLCGYEAGCLGFTLYHQLQAHGIPCIVMAPTTVMKEGSKRVKT
                     DKKDAAQ"
BASE COUNT          111 a           79 c           70 g          113 t
ORIGIN      
        1 gctgagctgc atctttttta tcagtcttaa cacgcttaga tccttccttc atcaccgttg
       61 taggcgccat cacgatacag ggaatcccgt gagcttgtag ctggtgatat agggtaaatc
      121 caagacatcc ggcttcgtag ccacataaca cttctgcatc ttgaccatat aaacgacgaa
      181 gctcattcac atagttcaca atatagctaa catttggacc aactttagtg ctatgtttga
      241 attgattcgc catcatatca taatagcaga gtgaaaaact ttctttgtga acatccattc
      301 cgatgaaaag tgtggtaaaa tgaaacatat aagacctcca attgagtgtg gtaattcctg
      361 ttagaagttg att
//
LOCUS       DASFQD010000248        11641 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.guided.074, whole genome shotgun sequence.
ACCESSION   DASFQD010000248 DASFQD010000000
VERSION     DASFQD010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 11641)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11641)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11641
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.guided.074"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            <1..5410
                     /locus_tag="U1021_002273"
     CDS             <1..5410
                     /locus_tag="U1021_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003084104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEM4712730.1"
                     /translation="TLMNLTNGRKIVPEPPQDITFREEGGIVIASLEEDLSQLDLRTG
                     QTEHLSAYEHLNLSQKFEILSHFDQVRNSRPKLPNLRRGEFDHEMEMTPIYADNELLT
                     YLEANGTIYDLQRPLTPQQEVILTEMSQTILGENTEKLTRLGIDLADVDEQQRGILID
                     AAGRFHLNNADLALLGGYPKATVTQLALATELLQMGLTHDKAEFFLTSQLDLEEARPI
                     AYAFLHEDLTLEEVRTFERDKLSQPDLSFREWREHISQTKPEIMTQSLPQNPIVEEAL
                     KRYPIASIVTYKGQEFQVMAIEDSGVNNLIRIELQNDFTDVIEQNPVLFLRTLEDITQ
                     ALHVPSVEEKEEMEETQQEFDLFSFMDMEESQEPVSQMTASVPSNKGEAKQEEALSED
                     ELEPKVIKTPPATDFHFPEDLTDFYPKTTRDKVETNVAAVRLVKSLESEHRQATPSEQ
                     ELLAKYVGWGGLANEFFDEYNPKFSKERGALKTLVTDKEYSDMKLSSLTAYYTDPHLI
                     RQMWEKLERDGFTGGKILDPSMGTGNFFAAMPKHLRENSKLYGVELDTITGTIAKHLH
                     PNSHIEVKGFETIVFNDNSFDLVLSNVPFANIRIADSRYDKPYMIHDYFVKKSLDLVH
                     DGGQVAIISSTGTMDKRTENILQDIREMTDFLGGVRLPDNAFKAIAGTNVTTDMLFFQ
                     KHMDKGYVADDLAFSGSIRYDKDDRIWLNPYFDGDYNSQVLGSYEVRNFNGGTLSVKG
                     TSDNLIEAVQTALKQVKAPRSVDPSDILITPDVMRRQVIDTSVPPEIRESLDQYSFGY
                     KDSTVYYRDHKGIRVGTKTEEISYYVDEEGTFKAWDTKYSQKQIDRFNALEVTDSTAL
                     DVYVTEEAAKRGQFKGYFKKTVFYEAPLSEKEVARIKGMVDIRNAYQEVIAIQRYYNY
                     DKDEFNHLLGHLNRTYDSFVKRFGYLNSAVNRNLFDSDDKYSLLASLEDECLDSSGKT
                     VSYTKSLAFEKALVRPEKEVTAVSSALDALNSSLADGRGVDLDYMMSIYQTDSKASLI
                     EELGDAIIPDPERYLNDREVVYESRKDFLSGDVMTKLEVVDLLIKEDNSDFPWQHYQN
                     LLEDVKPPRVTLADIDYRIGSRWIPLAVYGKFAQETFMGQTFDLTDQEVSTVLEVSPI
                     DGTMSYQSKFAFRYSTATDRSLGVPGSRYDSGRKIFENLLNSNQPTITKQVEDGDKKK
                     HVTDVEKTTVLRAKETELQELFQDFVASYPEVQQMIEETYNSLYNRTVSKVYDGSHLT
                     IDGLAQNISLRPHQKNAIQRIVEEKRALLAHEVGSGKTLTMLGAGFKLKELGMVHKPL
                     YVVPSSLTAQFGQEIMKFFPTKNVYVTTKKDFAKAKRKQFVSRIITGDYDAIVIGDSQ
                     FEKIPMSQEKQVTYIQDKLNQLREIKQGSDSDYTVKEAERSIKGLEHQLEELQKLERD
                     TFIEFENLGIDFLFVDEAHHFKNIRPITGLGNVAGITNTTSKKNVDMEMKVRQVQGEH
                     DYRNVVFATGTPVSNSISELYTMMSYIQPDVLERYQVSNFDSWVGAFGNIENAMELAP
                     TGDKYQPKKRFKKFVNLPELMRIYKETADIQTSDMLDLPVPEAKVIAVESELTEAQKY
                     YLEELVDRSDAIKSGSVDPSVDNMLKITGEARKLAIDMRLIDPAYTLSDNQKILQVVD
                     NVERIYREGENEKATQMIFSDIGTPKSKEEGFDVYNELKDLLVDRGIPKEAIAFVHDA
                     NTDDKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDVGRILR
                     TFKIKKNVEVTDNGKDNF"
     gene            5391..5760
                     /locus_tag="U1021_002274"
                     /pseudo
     CDS             5391..5760
                     /locus_tag="U1021_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001129922.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TnpV protein"
     gene            6127..8046
                     /gene="tet(O)"
                     /locus_tag="U1021_002275"
     CDS             6127..8046
                     /gene="tet(O)"
                     /locus_tag="U1021_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032490535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance ribosomal protection
                     protein Tet(O)"
                     /protein_id="HEM4712731.1"
                     /translation="MKIINLGILAHVDAGKTTLTESLLYTSGAIAEPGSVDKGTTRTD
                     TMNLERQRGITIQTAVTSFQWEDVKVNIIDTPGHMDFLAEVYRSLSVLDGAVLLVSAK
                     DGIQAQTRILFHALQTMKIPTIFFINKIDQEGIDLPMVYQEMKAKLSSEIIVKQKVGQ
                     HPHINVTDNDDMEQWDAVIMGNDELLEKYMSGKPFKMSELEQEENRRFQNGTLFPVYH
                     GSAKNNLGIRQLIEVIASKFYSSTPEGQSELCGQVFKIEYSEKRRRFVYVRIYSGTLH
                     LRDVIKISEKEKIKITEMCVPTNGELYSSDTACSGDIVILPNDVLQLNSILGNEMLLP
                     QRKFIENPLPMLQTTIAVKKSEQREILLGALTEISDGDPLLKYYVDTTTHEIILSFLG
                     NVQMEVICAILEEKYHVEAEIKEPTVIYMERPLRKAEYTIHIEVPPNPFWASVGLSIE
                     PLPIGSGVQYESRVSLGYLNQSFQNAVMEGVLYGCEQGLYGWKVTDCKICFEYGLYYS
                     PVSTPADFRLLSPIVLEQALKKAGTELLEPYLHFEIYAPQEYLSRAYHDAPRYCADIV
                     STQIKNDEVILKGEIPARCIQEYRNDLTYFTNGQGVCLTELKGYQPAIGKFICQPRRP
                     NSRIDKVRHMFHKLA"
     gene            8098..8271
                     /locus_tag="U1021_002276"
     CDS             8098..8271
                     /locus_tag="U1021_002276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine-rich KTR domain-containing protein"
                     /protein_id="HEM4712732.1"
                     /translation="MMKCEWILCPVCGSKTRNKIRKDTVLENYPLYCPKCRQERLIKV
                     DNLKITVIKEPDA"
     gene            8759..9271
                     /locus_tag="U1021_002277"
     CDS             8759..9271
                     /locus_tag="U1021_002277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007392094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEM4712733.1"
                     /translation="MVKYAPRKVYIRESGGYVELSYTEFCRCRESDQTYMDKLFIPIQ
                     GCLLEVVREQYTDFYRDKERWRYLQKLDTKNRLLSLDGFTDSEGNPLDFITDEAVDIA
                     ETVVNAVMVDRLKAALPLLSDSEQELIQAIFFDGLSEREVGARLGITQSVVNKRKARI
                     LIKLRKIIEN"
     gene            9366..9791
                     /locus_tag="U1021_002278"
     CDS             9366..9791
                     /locus_tag="U1021_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000323896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEM4712734.1"
                     /translation="MAYNHGREDRKWRIWKEAEEKLLRECGVDEATIEQIRMADRADF
                     NSNRRFYRWTNDVAEYLEDMAGRERQAEVGTVAELLEEIESENLYQVLVTVDGRTLKI
                     VLLKMQGYSTKEIAPLVHLTTGAIYARLDHLRKKLRKIL"
     gene            9875..10349
                     /locus_tag="U1021_002279"
                     /pseudo
     CDS             9875..10349
                     /locus_tag="U1021_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000331637.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
     gene            10504..11529
                     /locus_tag="U1021_002280"
     CDS             10504..11529
                     /locus_tag="U1021_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015521636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM4712735.1"
                     /translation="MQKLQTVNAETLLYEPLEKPSFVVDSLIPTGLSLFCGSQKIGKS
                     WLMLKLCLCVSQGIPLWDMPTMEGDVLYLCLEDTFCRIQDRLFRLTDEASGRLHFAVA
                     SCKLSDGLIVQLEDYLKDYPDSRLIVIDTLQKVRTASKDNAYASDYGDISLIKDFADR
                     HSLAVIVVHHIRKQNDSDVFNKVSGTTGLTGSADATFVLEKEKRASDTAKLYVTGRDT
                     PYQEYTLRFRDCRWELVERKTQEQLAKETIPDVLFRLVDFMRDKEEWIGTATELLAAM
                     GETETIPTVITKWLNEYRTTFLSENRICYQYSRRKDGRRIALARRAGDSGDGGDSDIR
                     IPPCYCH"
BASE COUNT         3556 a         2257 c         2808 g         3020 t
ORIGIN      
        1 taccttgatg aacttgacaa atggtagaaa aatagttcca gaacctcctc aagacatcac
       61 ctttcgtgaa gaagggggga tcgtcattgc aagtcttgag gaagatttat cacaactaga
      121 tttacgaaca gggcaaacag aacatttatc ggcttatgaa catctaaact tgtcccaaaa
      181 atttgagata ttaagtcact ttgaccaagt gcgaaatagc cgtccaaagc taccaaacct
      241 gagacgtggg gagtttgatc atgagatgga aatgacgcca atctatgcgg acaatgagct
      301 attaacctat ttagaagcta atgggaccat ctatgactta caacgtcctt taacacctca
      361 acaagaagtg atcttaactg aaatgagtca aaccattttg ggtgaaaata ccgaaaaact
      421 gactcgttta ggaatagact tagctgacgt tgacgagcaa caacgtggga tactgataga
      481 tgctgcaggg cgttttcatt tgaataatgc cgacctagcc ttattagggg gctatcctaa
      541 ggcaaccgtc actcaattag cccttgcgac agaattgctt cagatgggat taacgcatga
      601 caaggcagaa tttttcttga ccagtcagct agacttagaa gaagcaagac ccattgccta
      661 cgccttcttg catgaagacc ttactcttga agaagttaga acctttgaaa gggacaaact
      721 gtcccaacct gacctatcct ttagggaatg gcgagaacac atctcacaaa caaaacctga
      781 aatcatgact caatcactcc ctcaaaatcc tatcgtagag gaagccctta aacgctatcc
      841 gattgcttcg attgtgactt ataaggggca agagtttcag gtaatggcca ttgaggactc
      901 aggcgttaat aacctgattc ggattgaatt acaaaatgat ttcacagatg tgattgaaca
      961 aaatccagtt cttttcttac ggacactaga agacatcact caagctcttc atgttccttc
     1021 tgtcgaagaa aaagaggaaa tggaagaaac tcagcaggaa tttgacctct tttccttcat
     1081 ggatatggaa gaatctcaag agccggtttc tcaaatgacg gcttctgtac catcaaataa
     1141 gggagaggct aaacaagaag aagcattgtc ggaagatgag ttggaaccaa aagtcattaa
     1201 gacgccccca gccactgatt ttcactttcc agaagatttg acagactttt accctaagac
     1261 aacaagggat aaggttgaaa ctaacgtggc tgctgttcgt ttggtgaaaa gtcttgaatc
     1321 tgaacaccgt caagccacac caagtgaaca agaactcctt gccaaatacg tgggctgggg
     1381 aggacttgct aacgagtttt ttgacgagta taacccaaag ttttctaagg aacgtggggc
     1441 attaaaaacg ctagtcaccg ataaagagta ttcggacatg aaactatctt ctttgacagc
     1501 ttattacaca gaccctcact tgattcgtca gatgtgggag aagttagaac gtgatggctt
     1561 tactggtggt aaaatcctag acccgtctat gggaacgggg aatttctttg cggcaatgcc
     1621 caaacacctg agagaaaata gtaagttgta tggtgtagag ttagacacga ttacaggaac
     1681 tattgccaaa caccttcatc cgaatagtca cattgaagta aagggctttg agaccattgt
     1741 ctttaatgac aatagctttg atttggttct ctcaaatgtg ccttttgcca atatcaggat
     1801 tgcggacagt cgctatgaca agccctatat gattcatgac tattttgtca aaaaatccct
     1861 tgatttggtg catgatggtg ggcaagtggc tattatttcc tccacaggaa ccatggacaa
     1921 acggacagaa aacatcctcc aggacattcg tgagatgact gattttctcg gtggtgtgcg
     1981 tttaccagat aacgccttta aggccattgc aggtaccaat gtcacaacag acatgttgtt
     2041 cttccagaaa catatggata agggatatgt ggcagatgat ttagcttttt caggttctat
     2101 tcgctatgac aaggatgacc gtatttggct caatccttac tttgatgggg actacaacag
     2161 tcaggttctt gggagctatg aggttagaaa ctttaacggt gggacacttt ctgtaaaagg
     2221 cacttctgat aacctaatag aagctgttca gacggctctt aaacaagtta aagcgcctag
     2281 aagtgttgac ccttctgata tccttatcac tcctgatgtg atgagaagac aagtcattga
     2341 tacctctgtt ccgcctgaaa tcagagaaag cttagaccag tatagctttg gctataaaga
     2401 ttctacggtt tactaccgtg atcataaggg cattcgtgta gggacaaaga cagaggagat
     2461 tagctactat gtggacgagg aggggacctt taaggcatgg gacaccaagt attctcaaaa
     2521 acagattgac cgttttaatg ctttagaggt gactgatagc accgctcttg atgtgtatgt
     2581 gacagaagaa gccgctaaac gtggacaatt taagggctac ttcaaaaaga ctgttttcta
     2641 tgaagcgcct ttgtctgaga aagaagtagc acggattaaa gggatggtcg atattcggaa
     2701 cgcctaccaa gaggtgattg ccattcagcg atactataac tatgataaag acgagttcaa
     2761 tcacttgtta ggacatctca atcgcaccta tgatagtttt gtgaaacgtt ttgggtactt
     2821 gaatagtgct gtgaaccgta atctctttga tagtgatgat aagtattcgc tccttgcgag
     2881 tttagaagat gaatgccttg actcaagtgg taagactgtt agttatacca agtcgcttgc
     2941 ctttgaaaaa gccttggttc gtcctgaaaa ggaagtgacg gcagtttctt ctgcccttga
     3001 cgctctaaat tctagtctag cagatggtcg tggggtcgat ttggattaca tgatgtctat
     3061 ttatcaaaca gactctaaag cgtctttgat tgaagaatta ggagacgcta ttattcctga
     3121 cccagaacgc tatctaaacg atagggaagt ggtctatgaa tctcggaagg atttcttatc
     3181 aggggatgtg atgactaagt tagaggtcgt ggacttactc attaaagaag acaattctga
     3241 ttttccgtgg caacactatc aaaacctctt agaagacgtg aaaccaccac gtgtgacctt
     3301 agctgatatt gattatcgga ttggctcacg ttggattcct ctagccgttt atggtaaatt
     3361 tgcccaagaa acctttatgg gacaaacttt tgacctgact gaccaagaag tatcaactgt
     3421 tcttgaagtc agtccgattg atgggacgat gtcttaccaa tccaagtttg cctttaggta
     3481 ttctaccgca acggatagaa gtctaggtgt gcctgggtca cgctatgata gtggccgaaa
     3541 aatctttgaa aacctgctta attccaatca accaaccatc accaaacaag tggaagatgg
     3601 ggataagaaa aagcatgtga cagatgtgga gaagacaacg gttcttcgtg ctaaggaaac
     3661 tgagcttcaa gaactcttcc aagactttgt ggcaagttac ccagaggtgc aacagatgat
     3721 tgaagaaacc tataatagcc tttataatcg tacagtttca aaagtctatg atggcagtca
     3781 tttaaccatt gatgggcttg cccagaatat ttccttacgc cctcaccaga agaatgccat
     3841 tcaacgcatt gtggaagaaa aaagagcgct tctagctcat gaagtgggtt caggtaagac
     3901 cttaaccatg cttggggcag gcttcaaact gaaagaactc ggaatggtgc ataagcctct
     3961 ttatgtggtg ccatcaagtc tgaccgctca gtttggccaa gaaatcatga agttcttccc
     4021 aacgaagaat gtttacgtga cgaccaagaa agattttgcg aaagccaaac gtaagcagtt
     4081 tgtctcacgg atcatcacag gggactacga tgccattgtc attggggatt cccagtttga
     4141 aaaaattccc atgagtcagg aaaaacaggt cacctatatc caagataaac tgaaccaatt
     4201 acgagaaatt aagcaaggta gcgacagtga ttatactgta aaagaagcag agcgttctat
     4261 taagggattg gagcatcaac tagaagaact ccaaaaactg gagcgagata cctttattga
     4321 atttgaaaat ctgggcattg attttctctt tgtggacgaa gctcaccatt tcaagaatat
     4381 cagacccatt acaggcctag gtaatgtggc aggaattacc aacacgactt ctaaaaagaa
     4441 cgtggatatg gagatgaagg tgagacaggt tcaaggagaa cacgactatc gtaatgtggt
     4501 ctttgcgaca ggaacgccag tctctaactc tattagtgaa ctctatacca tgatgagcta
     4561 tattcaacca gatgtcttag aacggtatca agtctcaaac tttgactcat gggttggagc
     4621 ttttgggaat atcgaaaacg ctatggaact agcaccgaca ggggataagt accaacctaa
     4681 gaaacgcttt aagaagtttg tgaacctgcc tgaactcatg cggatataca aggaaactgc
     4741 ggacattcag acctctgata tgcttgattt acctgtccct gaagctaaag ttattgcagt
     4801 ggagagcgaa ctgacagaag ctcagaaata ttatcttgaa gagttggttg accgttcaga
     4861 cgctatcaag tctggtagcg ttgaccctag tgtcgataac atgttaaaga taactgggga
     4921 ggctagaaaa ctagctattg acatgcgtct cattgaccca gcctatacct tatcggacaa
     4981 tcagaagatt cttcaagtag tggataacgt ggaacggatt taccgtgagg gagaaaatga
     5041 gaaagctacc cagatgattt tctcagatat tggaacgcct aagagtaagg aagaaggctt
     5101 tgacgtttac aatgaattga aagacctttt agtggataga gggattccca aagaagcaat
     5161 tgcctttgtc catgacgcta atacggatga caagaaaaac tctctgtcac gcaaggtcaa
     5221 tagtggagaa gtacggattc tcatggcttc tacggaaaaa gggggaacag gattaaacgt
     5281 ccaatcacgt atgaaagcag tccaccattt agacgttccc tggaggccgt ctgatgtagg
     5341 acggattttg cggacattca aaataaaaaa gaatgtggag gtaacagaca atggcaaaga
     5401 caatttttga ggaaatgggc ggcaaatacg aaaggcaagg cgattattta ataccgtgct
     5461 taactgtacc cgccgaagaa gaacagccga taggcatctg gggacagcgg catttggatt
     5521 atctgaagca tcactgcaaa gttacataca ccaatcttct tacaagcggc aggctaaacg
     5581 cctaccttgc cgacatcaac agacaggcac aggaacgctt tgaaaggctc atagagggta
     5641 tgaaacaggc acagggcata acggctaaag gcagaaaacg ccttagaatg gacaggatgc
     5701 ctcaataaca taagggcttg tgcgagggag attgtggaaa aggaaattat ttttgcataa
     5761 acagatgatt agtggcaggg ggaaatcctg ccgctttttc tgctttagtt tgtcagcttg
     5821 acaaataaag ggttaaggaa tataattaga ttcagtatta tacaaggagt taataaatat
     5881 gcggcaaggt attcttaaat aaactgtcaa tttgatagtg ggaacaaaaa gtagcagtcc
     5941 cgtttcactt ttaatatggg gcttggtttt ttgtacccag tttaaaaatg cttttatcat
     6001 gtaattttat atgcccgaaa acatataagt gttttggggc tattggagtt atttacccag
     6061 tgataggagt atttatcact gggtattttt atgccctttt ttgggtgttg ataggaggaa
     6121 aatcacatga aaataattaa cttaggcatt ctggctcacg ttgacgcagg aaagacaaca
     6181 ttaacggaga gtttattgta taccagtggt gcaattgcag aaccagggag cgtagataaa
     6241 ggcacaacaa ggacagatac aatgaatttg gagcgtcaaa ggggaatcac tatccagaca
     6301 gcagtgacat cttttcagtg ggaggatgta aaagtcaaca ttatagatac gccaggccat
     6361 atggattttt tggcggaagt ataccgttct ttatccgtat tagacggagc agtattatta
     6421 gtttctgcaa aggatggcat acaggcacag acccgtatac tgtttcatgc actacagaca
     6481 atgaagattc cgacaatttt tttcatcaat aaaattgacc aagaggggat tgatttgcca
     6541 atggtatatc aagaaatgaa agcaaagctt tcttcggaaa ttatagtgaa gcaaaaggtt
     6601 gggcagcatc cccatataaa tgtaacggac aatgacgata tggaacagtg ggatgcggta
     6661 attatgggaa acgatgaact attagagaaa tatatgtcag ggaaaccgtt taaaatgtca
     6721 gaactggaac aggaagaaaa caggagattc caaaacggaa cgttatttcc cgtttatcac
     6781 ggaagtgcta aaaacaatct ggggattcgg cagcttatag aagtgattgc cagtaagttt
     6841 tattcatcaa cgcctgaagg tcaatctgaa ctatgcgggc aggtttttaa gattgaatat
     6901 tcagagaaaa ggcggcgttt tgtttatgtg cgtatatata gcggaacatt gcatttgagg
     6961 gatgttatta aaatatctga aaaagagaaa ataaaaatca cagagatgtg tgttccgaca
     7021 aacggtgaat tatattcatc cgatacagcc tgctctggtg atattgtaat tttaccaaat
     7081 gatgttttgc agctaaacag tattttgggg aacgaaatgc tgttgccgca gagaaaattt
     7141 attgaaaatc ctctccctat gctccaaaca acgattgcag taaagaaatc tgaacagcgg
     7201 gaaatattgc ttggggcact tacagaaatt tcagatggcg accctctttt aaaatattat
     7261 gtggatacta caacgcatga gattatactt tcttttttgg ggaatgtgca gatggaagtc
     7321 atttgtgcca tccttgagga aaaataccat gtggaggcag aaataaaaga gcctactgtt
     7381 atatatatgg aaagaccgct tagaaaagca gaatatacca tccacataga agtcccgcca
     7441 aatcctttct gggcttctgt cgggttgtcc atagagccgc tccctattgg aagcggagtg
     7501 cagtatgaaa gcagagtttc acttggatat ttaaatcaat cgttccaaaa tgcggttatg
     7561 gagggggttc tttatggctg cgagcagggg ctgtatggat ggaaagtgac agactgtaaa
     7621 atctgttttg aatatggatt gtattatagt cctgtaagta cccccgcaga ctttcggctg
     7681 ctttccccta tcgtattgga gcaggcttta aaaaaagcag gaacagaact attagagcca
     7741 tatctccact ttgaaattta tgcaccgcag gaatatctct cacgggcgta tcatgatgct
     7801 ccaaggtatt gtgcagatat tgtaagtact cagataaaga atgacgaggt cattctgaaa
     7861 ggagaaatcc ctgctagatg tattcaagaa tacaggaacg atttaactta tttcacaaat
     7921 gggcagggag tctgcttgac agagttaaaa ggataccagc cagctattgg taaatttatt
     7981 tgccaacccc gccgcccgaa tagccgtata gataaggttc ggcatatgtt ccacaagtta
     8041 gcttaacagc ttgcaaaagt catataaaat gagatttgaa aggattagag actaattatg
     8101 atgaaatgcg aatggatatt gtgtcctgtt tgtgggagca aaacccgtaa taaaattagg
     8161 aaggacactg ttttggagaa ttatcccctt tattgtccaa aatgcagaca agaaagattg
     8221 attaaagttg acaacttgaa gataactgtc atcaaagagc cagacgctta agacgcagag
     8281 ccgatgaaat tgtggaacaa ttcacgaatc atcggctctt tttgtttcgt atttgaaaga
     8341 acaaactcac caaataaaaa aaacgatatt cgggtgggtt attttgttat accctaaatt
     8401 accctctgaa tttgttttta aatttggagg gattttttta tgtccttttt tcgggcagtt
     8461 atctatctgc tcatacgaag caaaatttat caatacatag catatcagag aacggcagga
     8521 aaccagttaa aaaaatttct gccagtgcaa cggtacttct caccttgaaa gtagaagtac
     8581 aatctccata caatagaatt actatttcct ataaccgtaa aggtcacaga gcctttgcgg
     8641 tttttctttt gtcgattttt gttggaaagt gccgtagggc tgtttctgat atgcggtgtc
     8701 gttctccgcc tctccatctg gattttttac atttcaaaaa ttcagatggg aggtatttat
     8761 ggtgaaatat gcaccaagaa aggtatatat cagagaaagt ggcggctatg tggaattatc
     8821 ctacacggag ttctgccgtt gcagggaatc cgaccagacc tatatggaca agctgtttat
     8881 ccccattcaa ggctgtctgc ttgaagtcgt gagggagcaa tacacagact tctaccgtga
     8941 caaggaacgg tggcgttatc tgcaaaaatt agatacaaag aatagactgc tatctctcga
     9001 cggatttacg gacagcgagg ggaatcctct ggactttatc actgatgaag cggtggacat
     9061 tgcagaaacc gttgtcaatg cggtcatggt ggacaggctg aaagccgccc tgcctttgct
     9121 gtcggatagt gaacaggagc tgatacaggc aatctttttt gacggacttt ccgagcgtga
     9181 agtcggggcg aggttgggca taacccagag cgttgtaaac aaacgcaaag ccagaatcct
     9241 aataaaacta agaaagataa tagaaaatta aaatttaagg cgttcagccc ccttgttttt
     9301 tcctttggga agatgagggg gcttttctct gccctctcaa tcaattctga ttggaggaag
     9361 taagaatggc atacaaccac ggacgggagg acaggaaatg gcgtatctgg aaagaagcgg
     9421 aggaaaagct gctgcgtgag tgcggcgttg atgaagcgac cattgagcag atacgcatgg
     9481 cggacagggc agacttcaat tccaacaggc ggttttaccg atggacgaat gacgttgcgg
     9541 aatatcttga ggacatggca ggcagggagc ggcaggcgga agtgggtacg gttgcggagt
     9601 tactggaaga gattgagagc gaaaatctct atcaagtatt agtcacggtg gacgggcgta
     9661 ccttgaaaat cgtcctgctg aaaatgcagg ggtattccac aaaggagatt gccccgcttg
     9721 tgcatttgac gactggtgcc atctatgcga ggttagacca tctgcggaag aagctgcgga
     9781 aaattttata gcttctaaaa cagcctgcca tcctgcgggc tactgggtga gggatggaaa
     9841 tcccctcact cattttttgc aggaggacaa caggatggca tacagggtta aggcatacac
     9901 gcttcgggag gaatccacgg aaagcggcac aaggtatttt atcagcttta aggacgggca
     9961 gggcaaatcc cacgagttgg aagtgtcgga acagttcttt atggagtttc ggcagatgga
    10021 gcgcaggaac aggaatcttt tctaatggga cgagcggcac agggagttta acgaggtatg
    10081 ggacgaaacc ctttacagac gggcgttgcg tgtgcctaag agccttgatg aacgcatggt
    10141 tgaggaagaa cggaatgaaa cgctctataa ggcggttggg agccttccag agatacaaag
    10201 gcggcgtttc ctgctctact acgagtatga gttcaatttt taccaaatcg ccgctatgga
    10261 gcattgcacc gcttcggcaa tacagaaatc tgttgcgatt gcaaaggaga aagtaaaggc
    10321 ggaaattgaa gaaatatctc caaccgtgac cgacaccgcc cgaaaaagaa atctgttttt
    10381 tatttgtgtg ggattggcgg cattacatac tctcactttt ttccgtggga gtaaatctat
    10441 ttttaaggag gtcaacgcct atgtgcaacg aaaacaaaga caccgcccga aaggaggaaa
    10501 gccatgcaga agttacagac agtcaacgcc gaaacgctcc tttatgaacc gcttgagaaa
    10561 ccatcctttg tggtggacag ccttatcccg acaggcttat cgctgttctg cggctcacag
    10621 aagataggca aaagctggct catgctgaag ctatgcttat gcgtgtcgca gggaatccct
    10681 ttatgggata tgccgacaat ggagggcgat gtgctttacc tctgccttga ggacacgttc
    10741 tgccgcatac aggacaggtt atttcgtttg acggacgaag caagcgggcg gctccacttt
    10801 gccgtggcaa gctgcaagct gtcagacggt cttatcgtgc agcttgaaga ttatctgaaa
    10861 gattacccag acagcaggct cattgtcatt gataccttgc agaaagtccg tacagcttca
    10921 aaagacaatg cctatgcaag cgactatggg gacatctccc tcatcaaaga ctttgccgac
    10981 aggcactctc tggcggtcat tgtcgtacac cacatccgaa agcagaatga cagcgacgtg
    11041 ttcaacaagg tgtctgggac gacaggatta acggggagtg cggacgctac ctttgttctg
    11101 gaaaaggaga aacgtgcgtc tgacaccgcc aagctgtatg tgacgggcag ggacacgcct
    11161 tatcaggaat acacgctgcg tttccgtgat tgccgttggg agcttgtgga gcggaaaacg
    11221 caggagcagc ttgcgaaaga aacgatacca gatgtccttt ttcggttggt ggattttatg
    11281 agggataagg aagaatggat aggcacggca acggaactgt tagccgctat gggggaaacg
    11341 gaaaccatac ccacggtgat tacgaaatgg ctgaatgaat accgcaccac atttttaagc
    11401 gagaaccgta tctgctacca gtacagccgc aggaaagacg gcaggcggat tgcccttgca
    11461 aggagggcgg gtgacagcgg tgatggtggt gacagcgata ttaggatacc cccctgttac
    11521 tgtcattgac gcttaaagcc atgtaaagct ggcggctctg ccctgcgggt gacagcagtg
    11581 acggtggtga cagtgatttt aggataccct gccgctgtca tccctacggg agaacacccc
    11641 g
//
LOCUS       DASFQD010000249         5150 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.guided.139, whole genome shotgun sequence.
ACCESSION   DASFQD010000249 DASFQD010000000
VERSION     DASFQD010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 5150)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5150)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5150
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.guided.139"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            124..196
                     /locus_tag="U1021_002281"
     tRNA            124..196
                     /locus_tag="U1021_002281"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:157..159,aa:Thr,seq:ggt)
     gene            665..2392
                     /locus_tag="U1021_002282"
     CDS             665..2392
                     /locus_tag="U1021_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712736.1"
                     /translation="MFRLIFDYIKRHKWLYLLVAVTLIIYDATLLLPTQIIQRMVDIL
                     TKNELTQAILVQEMTLLLLVTVLNYATAFIWHLKLFQASVNFKFDMQQRAFKKLVTMR
                     TPFYEKFRSGDVMTRFSTDVDGLMEMVGYGLMIVVYAGGMLAFIIPTMFFIDWKISLV
                     ALLPMLFMTLCIFFIGRKQDKAIDANREAVAQLNNEVLEVIEGIRVTRAYSKKANQKA
                     QFQARTKQLAQGGDRITSLQSLYNPLATVCLGLSTIFVLLMGAQAVKAGQLTLGQVIA
                     LQLYVGSLLEPFWTLADFILVYQTGKTSFEKLQELIETGDDLEADGSKEIAELSSISF
                     KNYSFSYPQAERASLQDINWTLKAGQTVGIVGKTGSGKTTLVRQFLRQYPIGQGNFFI
                     NHQSVLDFKRSSIEEKIGYVPQEHILFSRSVGENISLGKVASSSEEIEQAIATAAFSQ
                     DLKRMTDGLDTMIGERGVSISGGQKQRISIARAFLREPDLLILDDSLSAVDARTERQI
                     IQNIQKERAGKTNVIVTHRLSAVNHADWVLVLDEGRIVEEGRPADLLAQRGWYYEQYQ
                     RQQSQEGGE"
     gene            2392..4131
                     /locus_tag="U1021_002283"
     CDS             2392..4131
                     /locus_tag="U1021_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015646585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM4712737.1"
                     /translation="MTILGFLLRQIRRVKWLFIVAVGFYLLASTMVRLAPLLIQQAID
                     GPITDLSKGLPFDEAVFLNQSVQYMGMIILGAIGFYLSMRLLMHCANRIAENLRNQAY
                     DVMQRLPISYFDDKPAGKIATRIVNDTETLRTQFYGTLVNAFNNIVRLLFTYGVLFYM
                     NRSLGWLMLLLIPLYIGIQFAYKKMTDKPMKDFYDARSDVNTQVNETMNGASLIQLFG
                     QEERIMKEFEVTADKMRRADNKIIWAQSLATWNLSGFLQNLVIAAILTVVGYQFLAGQ
                     DGVTAGKLFVYVNYIEGVFIALGALVQQFPNMLRSFETGKRLMALLEEELEDDCDRIL
                     EVEQGQVVFEHVNFSYEENRPVLKDITIRSEKGETVALVGHTGSGKSSIMNLLYRFYD
                     PQEGRVLIDGKNIRDYSRESLRSHMGIVLQDPYLFTGTIASNVSMNEEEADRTRIMQA
                     LEKVGAGPMLSRLEKGIDEPVVEKGAAFSSGERQLIAFARTLYSDPKILILDEATSHI
                     DTETEEIIQHAMEVVKEGRTTFIIAHRLSTIQNADQILVLDQGRIIEHGKHEELVARG
                     GVYAQMHEIQAKV"
     gene            4185..4895
                     /locus_tag="U1021_002284"
     CDS             4185..4895
                     /locus_tag="U1021_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012027345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM4712738.1"
                     /translation="MKALIFDVDDTLYDQIQPFERALERHIEVAREQIEPLYLSFRRY
                     ADEVFEATAIGKMSLKDSHIYRMKHALADFGYQVSDATALAIQIDYDYFQGQIELSPV
                     FPEIFSWCQAQGIAMGIITNGPYRHQLRKIRTMGLVNWFELEHVLISGQVGITKPNPA
                     IFQLMEERLGMSGEDICYLGDSFENDIIGAKTAGWQAVWFNHRKRSEPESSFQADYMI
                     DEWFNLDSLIKNIIKPIG"
BASE COUNT         1466 a          914 c         1193 g         1577 t
ORIGIN      
        1 actaaggtaa ggtggctaac ttcattatag aactttcgat ggcttatttt ctctttattt
       61 ttctcaatat ttccaaaaaa tccattgact ttttttagag atatgatata ctagtcaagt
      121 actgctggtt tagctcagtc ggtagagcgc atccatggta aggatgaggt cgccggttca
      181 atcccggcaa ctagcatcga atactatcga aaggccttgt ttgacaaggt tttttcttat
      241 ttttgtccta aattcgccct tattgtcaaa aatcccttga catgaatatt tattatggta
      301 gaatagggct tagaaatatg aaaggagtaa aacaaatgaa caagcaactt gtcattcagc
      361 aagctatttt ttatcataca ctcctttcta agcaggaaaa caaagctcat tgatgaactt
      421 ttgtcgtttt tcgtgggcta tattttgaaa cattgagaca atcaagcact gtgggtatgg
      481 tgtgataaaa attgtcgact atgttcaaga gctggtctat ttttgtggac ttacgcaagc
      541 ctaggtggag tgagatgctt ccctgggctt ttttgtgcgc ttagcttaga aaagtaaggt
      601 ctatcaattg tagcttattg aataaagtgg caaatgatag gttatggatt tgtaaaggag
      661 atatatgttt cgattaattt ttgactatat caagcgtcat aagtggctct atctattggt
      721 tgctgtgacc ttgattattt atgacgccac acttttgcta ccaacgcaaa tcattcagcg
      781 gatggtcgat atactaacca agaatgaatt aacacaggcc atattggttc aggagatgac
      841 cttattgtta ttggtaacag tgctgaacta tgcaacagcc ttcatttggc atctgaaatt
      901 atttcaggcc tctgtcaatt tcaagtttga tatgcagcaa cgtgccttta aaaaattagt
      961 gaccatgcgg actccatttt atgaaaaatt ccgctcagga gatgtcatga ctcgtttttc
     1021 aacggatgtg gatggcctga tggagatggt gggttacggt cttatgattg tcgtctatgc
     1081 aggcggtatg ttggctttta tcattcccac gatgttcttt attgattgga aaatttcgct
     1141 agtagcttta ctaccgatgc tgttcatgac actatgtata ttttttatcg ggagaaaaca
     1201 agataaggcg attgacgcca atagagaagc tgtagcccag ctcaataatg aagttttgga
     1261 ggtcatcgaa ggcattcgag tgactcgggc ttatagtaaa aaagcaaatc aaaaggctca
     1321 atttcaagct cgtaccaagc aattggctca aggtggggat cgcatcactt ccttgcaatc
     1381 attgtataat ccattagcca cagtctgttt gggattgtct actattttcg tacttctcat
     1441 gggggcacaa gccgtgaaag cagggcaact gaccttggga caagtaattg cccttcaatt
     1501 gtatgtcggt tcgcttttag agccgttttg gacactagca gatttcatcc ttgtttatca
     1561 gactggtaag acatctttcg aaaaactgca agagctgatt gagacgggtg atgatttgga
     1621 ggctgatggt tctaaggaaa ttgcagagct gtctagtatt tccttcaaaa attatagctt
     1681 tagttatcca caggcggaaa gagccagcct acaggatatc aattggacac tgaaagcagg
     1741 gcaaactgta ggtatcgttg ggaaaactgg ttcgggaaaa acgaccttgg ttcgccaatt
     1801 cttacgccag tatccgattg gtcagggaaa ttttttcatc aatcatcaat ctgttttaga
     1861 ctttaaacgt tctagtatag aggaaaaaat tggctatgtt ccacaagaac acattttgtt
     1921 ttcaaggtct gttggagaaa atatttccct ggggaaagta gctagtagct ctgaggagat
     1981 tgaacaagcc attgccacag cagcttttag tcaagattta aaacggatga ctgatggtct
     2041 tgataccatg attggtgagc gtggtgtgtc tatttctggc ggtcagaaac aacggatttc
     2101 cattgcccgt gctttcctgc gagagccaga tttgctaatt ctagatgatt ctttgtcggc
     2161 agtggatgct cggacagaac gccagattat ccaaaatatt caaaaagaac gtgcaggcaa
     2221 aaccaatgtc atcgtgaccc atcgtctatc tgctgtcaac catgcagatt gggtactagt
     2281 cttggatgag gggcgtatcg ttgaggaagg gcgtccagct gatttgcttg cccaaagagg
     2341 ttggtactat gaacaatacc aacgacaaca aagccaggaa ggaggagagt aatgactatt
     2401 ttaggttttt tattaagaca aatccgtcga gtcaagtggc tatttatagt agctgtcggc
     2461 ttctatctat tggcttcgac catggttcga ttggctcctc tactgattca gcaggcgatt
     2521 gatgggccga ttacggattt gagcaagggt ttgccttttg atgaagctgt tttcttaaac
     2581 cagtcagttc aatacatggg aatgattatt ctgggagcta ttggcttcta cctatctatg
     2641 cgtttactca tgcattgcgc caatcgtatt gctgaaaatc tacgtaatca agcctatgat
     2701 gttatgcaac ggttgcctat ttcttatttt gatgataagc ccgctggaaa aattgcaact
     2761 agaattgtca atgatacaga aactctgcgg acacaatttt atgggacctt agttaatgcc
     2821 tttaacaata ttgttcgttt gctctttaca tacggtgtcc tattttacat gaataggagt
     2881 cttggttggc tgatgttact cttgatacca ctctatatcg gtattcaatt tgcttacaag
     2941 aaaatgacag acaagccgat gaaggatttt tatgatgcaa ggagtgacgt caatacgcag
     3001 gtgaatgaga ccatgaatgg tgcaagtttg attcaacttt ttggacaaga agagcgcatc
     3061 atgaaagaat ttgaagtgac tgctgacaag atgcgtcggg cagataataa gattatctgg
     3121 gcccagtctc ttgccacgtg gaatctgagt ggttttcttc aaaatttggt cattgctgcg
     3181 attttaacgg tagtcggcta tcaatttctt gcgggacagg atggagttac agctgggaaa
     3241 ctctttgttt atgtcaacta tatcgaagga gtcttcattg ctttgggagc gctggttcaa
     3301 cagttcccaa atatgcttcg ctcgtttgaa acaggtaagc gtctaatggc ccttctagaa
     3361 gaagagctgg aggacgactg tgatcgtatt ttggaagttg aacaagggca agtcgtgttt
     3421 gaacatgtga actttagcta tgaagaaaac agaccagttt tgaaagatat taccattcgg
     3481 tcagaaaaag gagaaacagt tgctctggtt gggcatactg ggtctggtaa gtcttctatt
     3541 atgaacctcc tctatcgttt ctatgatcca caggagggac gtgtactgat tgatgggaaa
     3601 aatatccgtg attattctcg tgaaagcctg cgcagtcaca tggggattgt tttgcaagat
     3661 ccctatctct ttacagggac gattgccagc aatgtttcca tgaatgaaga ggaagcagat
     3721 agaacaagaa tcatgcaggc gttagaaaaa gttggtgcag ggcctatgct atctcgctta
     3781 gagaaaggga ttgatgaacc ggttgttgag aagggggcgg ccttttcaag tggggaacgt
     3841 cagttgattg cctttgcgcg gacactctac tctgatccta aaattctgat attggatgaa
     3901 gcaacttctc atattgatac ggagacggaa gaaattatcc aacatgccat ggaagtggtg
     3961 aaagaaggtc ggacaacctt tatcattgcc caccgacttt ctaccattca aaatgcagac
     4021 cagattcttg tcttagatca aggtcgaatt attgaacatg ggaagcatga agaattggtt
     4081 gcacgtggtg gagtatatgc tcaaatgcat gagattcaag caaaggtgta ataagcagtt
     4141 aaaaattcca agctttggct ggaatttttt gctataattg actcatgaaa gccttaattt
     4201 ttgatgtaga tgatacgctt tatgatcaga ttcaaccgtt tgaacgtgct ttggaaagac
     4261 acattgaagt agcaagggag caaattgaac cactctacct ttcctttcgc agatatgcgg
     4321 atgaagtatt tgaagcgaca gcaattggaa agatgagttt gaaagacagt catatttatc
     4381 ggatgaaaca tgctttggca gattttgggt atcaggtgtc tgatgcaaca gccttagcta
     4441 ttcaaataga ttatgattat tttcaagggc agatagagct cagtccagtg tttccagaaa
     4501 tattttcgtg gtgtcaggcg caaggaattg caatggggat tattacgaat ggaccttata
     4561 gacatcagtt gagaaagata cgcacgatgg ggttagttaa ttggtttgag ctagaacatg
     4621 tccttatttc tggacaagtt ggtattacaa agccaaatcc tgctattttt caactaatgg
     4681 aagaacgttt ggggatgtca ggcgaagata tttgttatct aggggattcg tttgaaaatg
     4741 acatcatcgg ggcaaaaaca gctggttggc aagcggtctg gtttaatcac agaaaacggt
     4801 cagagccaga aagttccttt caggcagatt atatgattga cgaatggttc aatctggatt
     4861 cccttatcaa aaacatcata aagccgattg gataaataaa atggaataac tctcctaaca
     4921 agtttttaat aggattagaa gctagtcggg ggagtttttg tgttcaaaaa gaggaggtat
     4981 agtcatttag tttatcttta attacttcga cgcaagagga aactccgttt tcttatttcc
     5041 tacttcaaac actccactgg attgtttgaa ctcgctttgc cgtactccac gaaagtgact
     5101 tgcttcgcat gtcttatttc caacctagaa cagcctctag gctgttctag
//
LOCUS       DASFQD010000250         4371 bp    DNA     linear   BCT 11-DEC-2023
DEFINITION  TPA_asm: Streptococcus suis isolate 133-2831
            SAMN09459627-rid19047543.guided.153, whole genome shotgun sequence.
ACCESSION   DASFQD010000250 DASFQD010000000
VERSION     DASFQD010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09459627
            Sequence Read Archive: SRR7369700
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae;
            Streptococcus.
REFERENCE   1  (bases 1 to 4371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 09-AUG-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001847177.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001847177.1
            Genome Coverage       :: 79x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 08/11/2023 23:23:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,293
            CDSs (total)                      :: 2,253
            Genes (coding)                    :: 2,142
            CDSs (with protein)               :: 2,142
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 47 of 111
            Pseudo Genes (incomplete)         :: 52 of 111
            Pseudo Genes (internal stop)      :: 28 of 111
            Pseudo Genes (multiple problems)  :: 13 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4371
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09459627-rid19047543.guided.153"
                     /isolate="133-2831"
                     /isolation_source="lung"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /country="Australia"
                     /collection_date="2015"
     gene            89..298
                     /locus_tag="U1021_002285"
     CDS             89..298
                     /locus_tag="U1021_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000527318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-binding protein"
                     /protein_id="HEM4712739.1"
                     /translation="MGNLGAQKAKRNDTPISAKKDIMGDKTVRVRADLHHIIKIETAK
                     NGGNVKEVMDKALEEYIRKYLPDKL"
     gene            315..470
                     /locus_tag="U1021_002286"
                     /pseudo
     CDS             315..470
                     /locus_tag="U1021_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002333002.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
     gene            508..1245
                     /gene="erm(B)"
                     /locus_tag="U1021_002287"
     CDS             508..1245
                     /gene="erm(B)"
                     /locus_tag="U1021_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011018369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2058)-N(6))-methyltransferase
                     Erm(B)"
                     /protein_id="HEM4712740.1"
                     /translation="MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLT
                     TKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGNIP
                     YHLSTQIIKKVVFESHASDIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAE
                     CFHPKPKVNSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHA
                     KVNNLSTVTYEQVLSIFNSYLLFNGRK"
     gene            1391..1675
                     /locus_tag="U1021_002288"
     CDS             1391..1675
                     /locus_tag="U1021_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002326770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HEM4712741.1"
                     /translation="MPTKRSGPLVGKCPKCGNNIVLKKSFYGCSNYPECTFTLAEHFR
                     KKKLTKTNVKELLEGKETLVKGIKTKDRKSYNAVVKIGEKGYIDFISFSK"
     gene            complement(1704..1865)
                     /locus_tag="U1021_002289"
                     /pseudo
     CDS             complement(1704..1865)
                     /locus_tag="U1021_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004844629.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase"
     gene            complement(1920..2183)
                     /locus_tag="U1021_002290"
     CDS             complement(1920..2183)
                     /locus_tag="U1021_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000253176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage II sporulation protein R"
                     /protein_id="HEM4712742.1"
                     /translation="MVSDWQGGDISKLFPALSGKEDLSMGEDKKADKKRKRIVPKAPV
                     QMIISREYVGTQTVTEAFVPIISEDIRKKIAEGDTFDNEGLSA"
     gene            complement(2183..2413)
                     /locus_tag="U1021_002291"
     CDS             complement(2183..2413)
                     /locus_tag="U1021_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001206986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM4712743.1"
                     /translation="MREIQYEIVKEIAVLSTGDSGYTKEINLISWNGKEPKYDIRSFS
                     PNREKCGKGITLNADEAAALLKALQKELNSED"
     gene            complement(2459..3313)
                     /locus_tag="U1021_002292"
     CDS             complement(2459..3313)
                     /locus_tag="U1021_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002596257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEM4712744.1"
                     /translation="MKKQDFKVLKTKDLYPFPDNPFHVAEDETLSELAESIKEFGIVT
                     PIITRPKEDGDGYEVIAGQRRVRASELAGINTVPAFVLPLDRDRAIITLVDSNLQREN
                     ILPSERAFAYKMKSEAMKRQGFRTDLTSSQVVTKLRTDDKVAQGFGVGRMTVQRFIRL
                     TELIPPILQMVDEGKIALTPAVELSFLKKDEQENLFATMESEEATPSLSQAQRMKQLS
                     QSGRLDMDTIFAIMTEEKGNQKETLKINTSKLKKYFPKNTTPKQMEETIIKLLERELQ
                     RKRNRDSR"
     gene            complement(3322..4287)
                     /locus_tag="U1021_002293"
     CDS             complement(3322..4287)
                     /locus_tag="U1021_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002569195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination protein"
                     /protein_id="HEM4712745.1"
                     /translation="MPYAILRFQKRKAGGVAACERHNERKKEAYKSNPDIDMERSKNN
                     YHLIAPPKYTYKKEINRMVAEAGCRTRKDSVMMVETLITASPEFMNQLPPEEQKAYFQ
                     TALDFISERVGKQNILSAVVHMDERTPHMHLCFVPITPDNKLSAKAILGNQKSLSEWQ
                     TAYHERMSSRWNQLERGQSSMETKRKHVPTWLYKLGGRLDKQYEEIVSALSDINAFNA
                     GKKRDKALDLLSAWLPDVEKFSKEIGKQQAYIDSLKERIGQESDYAGRMRDEKYEQEL
                     KVQKANQKIFELQRTNEQMGRLLSKIPPEVLEELQKNHRSRAKER"
BASE COUNT         1184 a          971 c          888 g         1328 t
ORIGIN      
        1 tcacaagtga ttaatcacaa atcacttgtg atttgtgatt gttgatgata aaataagagt
       61 aagaagaaat agaaagaagt gagtggttgt gggaaattta ggcgcacaaa aagcaaaacg
      121 aaatgataca ccaatcagtg caaaaaaaga tattatgggg gataagacgg ttcgtgttcg
      181 tgctgacttg caccatatta taaaaatcga aacagcaaag aatggcggaa acgtaaaaga
      241 agttatggat aaagccttag aagaatatat tcggaaatat ttacctgaca aactttaaaa
      301 ggagtgaaaa tgaaatggca gttacttatg aaaaaacatt tgaaatagag atcattaacg
      361 aattatcggc aagcgtttat aatcgagtat taaactatgt tttgaatcat gaattaaata
      421 aaaatgactc tcaattattg gaagtcaatt tattaaacca attaaagctt agatgctaaa
      481 aatttgtaat taagaaggag tgattacatg aacaaaaata taaaatattc tcaaaacttt
      541 ttaacgagtg aaaaagtact caaccaaata ataaaacaat tgaatttaaa agaaaccgat
      601 accgtttacg aaattggaac aggtaaaggg catttaacga cgaaactggc taaaataagt
      661 aaacaggtaa cgtctattga attagacagt catctattca acttatcgtc agaaaaatta
      721 aaactgaata ctcgtgtcac tttaattcac caagatattc tacagtttca attccctaac
      781 aaacagaggt ataaaattgt tgggaatatt ccttaccatt taagcacaca aattattaaa
      841 aaagtggttt ttgaaagcca tgcgtctgac atctatctga ttgttgaaga aggattctac
      901 aagcgtacct tggatattca ccgaacacta gggttgctct tgcacactca agtctcgatt
      961 cagcaattgc ttaagctgcc agcggaatgc tttcatccta aaccaaaagt aaacagtgtc
     1021 ttaataaaac ttacccgcca taccacagat gttccagata aatattggaa gctatatacg
     1081 tactttgttt caaaatgggt caatcgagaa tatcgtcaac tgtttactaa aaatcagttt
     1141 catcaagcaa tgaaacacgc caaagtaaac aatttaagta ccgttactta tgagcaagta
     1201 ttgtctattt ttaatagtta tctattattt aacgggagga aataattcta tgagtcgctt
     1261 ttgtaaattt ggaaagttac acgttactaa agggaatgta gataaattat taggtatact
     1321 actgacagct tccaaggagc taaagaggtc cctagcgcct acggggaatt tgtatcgata
     1381 aggggtacaa attcccacta agcgctcggg accccttgta ggaaaatgtc ctaagtgtgg
     1441 caacaatatt gtattaaaaa aatcgtttta tggttgttca aattatcctg aatgtacctt
     1501 cactttagct gaacatttta gaaagaaaaa actcaccaaa acaaatgtaa aagaattact
     1561 agagggaaaa gaaaccctgg taaaaggaat caaaacgaaa gatagaaagt cctacaatgc
     1621 cgttgtaaaa atcggagaaa agggatatat tgattttata tctttctcaa aataaacata
     1681 aaagcccttt aaagagggct tttatacgtt tttgctatgt gccatccctg ctttttcaca
     1741 taatccgtga ggatggattt ctgtgtcgca atgctcgcac tctcgttatc cgtaccatcg
     1801 tctttagata agcggcaata aatgccgact aaatagattt tcttttcttc tttgattcct
     1861 gccatactgt aaaacctccg tatctgtcct atctgttttc atgtcccatt gcgtacattc
     1921 taagcggaca gcccctcatt gtcgaaggtg tcgccctcgg caatcttctt ccgaatatcc
     1981 tcggagataa tcgggacaaa cgcttctgta acggtctgtg tgccgacata ttcacggctg
     2041 attatcatct gcactggtgc ttttggcacg atacgctttc tctttttatc tgctttctta
     2101 tcctcgccca tacttaaatc ttcctttcca gacagggcag ggaagagttt ggaaatgtcc
     2161 ccgccctgcc aatcagatac cattaatcct cgctgtttaa ttctttctgt aatgctttaa
     2221 ggagtgccgc cgcttcatca gcgttcagcg tgattccctt gccgcacttt tcacggttcg
     2281 gggaaaagct gcggatgtca tacttcggct ctttcccatt ccatgaaatg agattgattt
     2341 cctttgtgta gccactgtcg cccgtagaca atactgcgat ttcctttacg atttcatact
     2401 ggatttctct cattctccat acctcaactc tctgtattta cttcccgaaa aaagaagatt
     2461 agcggctgtc acggttgcgt ttcctctgca actcacgctc caaaagtttg atgatggttt
     2521 cctccatctg cttcggcgtt gtgttcttcg gaaagtattt tttcagcttg cttgtgttga
     2581 ttttcaaggt ttctttctgg ttgccctttt cctccgtcat aatcgcaaat atcgtatcca
     2641 tgtcaagccg cccgctctgg cttaactgtt tcatccgctg tgcctgtgag agtgagggcg
     2701 ttgcttcttc gctctccatc gtggcaaaga ggttttcctg ctcgtctttc ttcaagaagg
     2761 acagttccac cgcaggcgtg agggcgattt tcccctcgtc caccatctgc aaaatcggcg
     2821 gtatcagttc cgtcaggcgg ataaaacgct gcacggtcat cctgcccacg ccgaagccct
     2881 gtgccacctt gtcgtccgtc cgcaacttcg tcacaacttg tgacgaggtt aagtctgtgc
     2941 ggaaaccctg ccgcttcatg gcttcggatt tcatcttgta agcaaacgcc cgctccgatg
     3001 gcaggatatt ctcacgctgc aaattgctgt ctacaagggt gatgatggct cggtcacggt
     3061 ctaagggcag gacaaacgca ggcacggtat ttatccctgc aagttcagaa gcacggacac
     3121 gccgctgtcc tgcaatcact tcataaccgt ccccgtcctc tttcgggcgt gtgattatcg
     3181 gcgtgacaat gccaaattcc ttgatgcttt ccgctaactc tgacagtgtt tcatcttctg
     3241 ccacatgaaa cggattgtcg gggaacgggt acaagtcttt ggtctttaac accttaaaat
     3301 cctgtttctt cattcacata tctacctttc tttcgctctg cttctatgat ttttctgcaa
     3361 ttcttccaac acttcgggcg gtatttttga cagcagccgc cccatctgct cgttggttct
     3421 ctgcaattca aatatcttct gattcgcttt ctgcaccttt agttcctgct cgtacttttc
     3481 atcacgcata cgccccgcat agtctgattc ctgcccaatt ctctctttca aactgtcgat
     3541 atacgcctgc tgtttcccga tttccttaga gaatttctcc acgtctggca gccatgcaga
     3601 gagtaaatct aacgctttat cccttttctt ccctgcgtta aaggcgttga tgtcggatag
     3661 ggcagacacg atttcttcat actgtttatc aagcctgccg cctaatttat agagccatgt
     3721 ggggacgtgt ttccgcttgg tttccattga ggactgcccc cgttcaagct gattccaccg
     3781 tgaggacatc cgctcatggt aggcggtctg ccactcggat aatgatttct ggttgcctaa
     3841 gatagctttc gctgacagct tattgtctgg cgtaatcggc acaaagcaga ggtgcatatg
     3901 gggcgttctc tcgtccatat ggacgacagc ggagaggata ttctgctttc caacacgctc
     3961 cgaaatgaag tcaagagccg tctggaaata cgctttttgt tcttcgggcg gtaactggtt
     4021 cataaattct ggtgaagctg tgatgagcgt ttccaccatc atcacgctgt ctttccttgt
     4081 cctgcacccc gcttcggcta ccatgcggtt aatctctttc ttgtaggtgt actttggtgg
     4141 tgctatgaga tggtaattgt ttttagagcg ttccatatct atatctgggt tgcttttgta
     4201 ggcttctttc ttccgctcgt tgtggcgttc acaagccgca acgccgcccg cttttcgttt
     4261 ctggaaacgc aggattgcat aaggcatagg cggattcctc ctttctttcg gcgggtgacc
     4321 gtcctttggg gtgacagcgg tgacggtggt gacagcagtt ttgggatacc c
//
